Citrus Sinensis ID: 047465

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------14
Protein Sequence
YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRPAFSYNISTSSASKTEDCSINQVTISLLEAR
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHHcccccccccccccHHHHHHHHHHcccccHHHHHHHcccccHHHHHHHHHHHHHHccccccccccHHHHHHHHccccccccccccccEEEcccccccccccccccccEEEEccccc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHccccEEEEcHHHcccccHHHHHHHHHHHHHEEcccHcccccHHHHHEEccccccccccccccEEEEEccccccccccccEEccEEEEEEccc
Coil and Loop (DISEMBL)
YALEGVFSIKSDIFSLGVLMLEILSgkkntefywtDSLIFVIYYLRVANSHIFLCLWLIINLRhgiygrttgHWTLLCaqesaddrptvYDVVSMLTNeattlnpsnrpafsynistssasktedcsiNQVTISLLEAR
Flexible Loop (DISEMBL)
yalegvfsiksdifsLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNeattlnpsnrpaFSYNIStssasktedcsiNQVTISLLEAR
Low Complexity Region (SEG)
YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRPAFSYNISTSSASKTEDCSINQVTISLLEAR
Disordered region (IsUnstruct)
****GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTN*****************************************
Disordered Region (DISOPRED)
YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRP**********************TISLLEAR
Disordered Region (DISEMBL)
YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRPAFSYNISTSSASKTEDCSINQVTISLLEAR
Disordered Region (DISPRO)
***EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRPAFSYNIST******EDCSINQVTISLLEA*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRPAFSYNISTSSASKTEDCSINQVTISLLEAR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	139	2.2.26 [Sep-21-2011]
Q39086	843	Receptor-like serine/thre	yes	no	0.971	0.160	0.365	9e-19
Q9S972	847	Receptor-like serine/thre	no	no	0.992	0.162	0.359	8e-17
Q9ZR08	852	G-type lectin S-receptor-	no	no	0.964	0.157	0.405	3e-15
Q8RX80	659	Cysteine-rich receptor-li	no	no	0.949	0.200	0.361	6e-15
P0DH86	853	G-type lectin S-receptor-	no	no	0.956	0.155	0.320	7e-15
Q9SXB4	820	G-type lectin S-receptor-	no	no	0.884	0.15	0.341	1e-14
O23081	665	Cysteine-rich receptor-li	no	no	0.949	0.198	0.350	1e-14
Q9LPZ9	830	G-type lectin S-receptor-	no	no	1.0	0.167	0.363	1e-14
Q9LZU4	676	Cysteine-rich receptor-li	no	no	0.942	0.193	0.375	1e-14
O81905	850	Receptor-like serine/thre	no	no	0.906	0.148	0.327	2e-14

>sp|Q39086|SD17_ARATH Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana GN=SD17 PE=1 SV=1

 Score = 92.0 bits (227), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 89/156 (57%), Gaps = 21/156 (13%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDS----LIFVIYYLRVANSHIFLCL 56
           YA++G+FS+KSD+FS GVL+LEI+SGK+N  FY ++     L FV  + +  N    L +
Sbjct: 692 YAMDGIFSMKSDVFSFGVLLLEIISGKRNKGFYNSNRDLNLLGFVWRHWKEGNE---LEI 748

Query: 57  WLIINLRHGIYGRTTGHW-------TLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRP 109
              IN+   +  +   H         LLC QE A+DRP +  V+ ML +E T +    RP
Sbjct: 749 VDPINI-DSLSSKFPTHEILRCIQIGLLCVQERAEDRPVMSSVMVMLGSETTAIPQPKRP 807

Query: 110 AFSYNI------STSSASKTEDCSINQVTISLLEAR 139
            F          S+SS  + ++C++NQ+T+S+++AR
Sbjct: 808 GFCIGRSPLEADSSSSTQRDDECTVNQITLSVIDAR 843

Involved in the regulation of cellular expansion and differentiation. Mediates subcellular relocalization of PUB9 from nucleus to plasma membrane in a protein-phosphorylation-dependent manner. May be involved in the abscisic acid-mediated signaling pathway, at least during germination.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9S972|SD16_ARATH Receptor-like serine/threonine-protein kinase SD1-6 OS=Arabidopsis thaliana GN=SD16 PE=1 SV=2

 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 55/153 (35%), Positives = 88/153 (57%), Gaps = 15/153 (9%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYL-RVANSHIFLCLWLI 59
           YA++G+FS+KSD+FS GVL+LEI+SGK+N  FY ++  + ++ ++ R       L +   
Sbjct: 696 YAMDGIFSMKSDVFSFGVLLLEIISGKRNKGFYNSNRDLNLLGFVWRHWKEGKELEIVDP 755

Query: 60  INLRHGIYGRTTGHW-------TLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRPAFS 112
           IN+   +      H         LLC QE A+DRP +  V+ ML +E T +    RP F 
Sbjct: 756 INI-DALSSEFPTHEILRCIQIGLLCVQERAEDRPVMSSVMVMLGSETTAIPQPKRPGFC 814

Query: 113 YN------ISTSSASKTEDCSINQVTISLLEAR 139
                    S+SS  + ++C++NQVT+S+++AR
Sbjct: 815 VGRSSLEVDSSSSTQRDDECTVNQVTLSVIDAR 847

Involved in the regulation of cellular expansion and differentiation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ZR08|Y4230_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 OS=Arabidopsis thaliana GN=At4g03230 PE=3 SV=3

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/153 (40%), Positives = 88/153 (57%), Gaps = 19/153 (12%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTD---SLIFVIYYLRVANSHIFLCLW 57
           YALEG+FS KSD+FS GV+++E +SGK+NT F+  +   SL+   + L  A   I L   
Sbjct: 705 YALEGLFSFKSDVFSFGVVVIETISGKRNTGFHEPEKSLSLLGHAWDLWKAERGIEL--- 761

Query: 58  LIINLRHGIYGRTTG-----HWTLLCAQESADDRPTVYDVVSML-TNEATTLNPSNRPAF 111
           L   L+      T G     +  LLC QE  +DRPT+ +VV ML ++EA TL    +PAF
Sbjct: 762 LDQALQESC--ETEGFLKCLNVGLLCVQEDPNDRPTMSNVVFMLGSSEAATLPTPKQPAF 819

Query: 112 -----SYNISTSSASKTEDCSINQVTISLLEAR 139
                  +   SS++K E CS N++TI+L + R
Sbjct: 820 VLRRCPSSSKASSSTKPETCSENELTITLEDGR 852

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8RX80|CRK18_ARATH Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2

 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 79/155 (50%), Gaps = 23/155 (14%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLI--FVIYYLRV-ANSHIFLCLW 57
           Y   G FS+KSD++S GVL+LEI+SGKKN+ FY  D L+   V Y  ++  N  +   L 
Sbjct: 512 YVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQMDGLVNNLVTYVWKLWENKSLHELLD 571

Query: 58  LIIN--------LRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRP 109
             IN        +R+        H  LLC QE+  DRPT+  +  MLTN + TL     P
Sbjct: 572 PFINQDFTSEEVIRY-------IHIGLLCVQENPADRPTMSTIHQMLTNSSITLPVPLPP 624

Query: 110 AFSYNISTS-----SASKTEDCSINQVTISLLEAR 139
            F +          S SK+  CS+++ TI+ +  R
Sbjct: 625 GFFFRNGPGSNPGQSNSKSFACSVDEATITDVNPR 659

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|P0DH86|SRK_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana GN=SRK PE=2 SV=1

 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 82/162 (50%), Gaps = 29/162 (17%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFY---------------WTDSLIFVIYYL 45
           YA+EG+FS+KSD+FS GVL+LEI+SGK+N  F+               W +     I   
Sbjct: 698 YAMEGIFSVKSDVFSFGVLVLEIVSGKRNRGFHNSGQDNNLLGYTWENWKEGKGLEIVDS 757

Query: 46  RVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNP 105
            + +S   + L+    +   I         LLC QE A+DRP +  VV ML +E   +  
Sbjct: 758 IIVDSSSSMSLFQPHEVLRCI------QIGLLCVQERAEDRPKMSSVVLMLGSEKGEIPQ 811

Query: 106 SNRPAF--------SYNISTSSASKTEDCSINQVTISLLEAR 139
             RP +        + + S+S+   +E  ++NQ+T+S++ AR
Sbjct: 812 PKRPGYCVGRSSLDTADSSSSTKRDSESLTVNQITVSVINAR 853

Female specificity determinant of self-incompatibility.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SXB4|Y1130_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 OS=Arabidopsis thaliana GN=At1g11300 PE=2 SV=1

 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 82/155 (52%), Gaps = 32/155 (20%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTE-----FYWT-------DSLIFVIYYLRVA 48
           YA+ G+FS KSD+FSLGV++LEI+SG++N+      + W+       +SL+    +  + 
Sbjct: 682 YAMGGLFSEKSDVFSLGVILLEIISGRRNSNSTLLAYVWSIWNEGEINSLVDPEIFDLLF 741

Query: 49  NSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNR 108
              I  C+                H  LLC QE+A+DRP+V  V SML++E   +    +
Sbjct: 742 EKEIHKCI----------------HIGLLCVQEAANDRPSVSTVCSMLSSEIADIPEPKQ 785

Query: 109 PAF--SYNISTSSASKTEDC--SINQVTISLLEAR 139
           PAF    N+  + +S+  D   SIN VTI+ +  R
Sbjct: 786 PAFISRNNVPEAESSENSDLKDSINNVTITDVTGR 820

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O23081|CRK41_ARATH Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=3 SV=2

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 82/154 (53%), Gaps = 22/154 (14%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYY----------LRVANS 50
           YA+ G FS+K+D+FS GVL+LEI+ GKKN      DS +F++ Y          L + + 
Sbjct: 519 YAMSGEFSVKTDVFSFGVLVLEIIKGKKNNWSPEEDSSLFLLSYVWKSWREGEVLNIVDP 578

Query: 51  HIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRPA 110
            +   + +   +   I      H  LLC QE+A+ RPT+  VV ML   + TL   ++PA
Sbjct: 579 SLVETIGVSDEIMKCI------HIGLLCVQENAESRPTMASVVVMLNANSFTLPRPSQPA 632

Query: 111 FSYNISTSSASKTED-----CSINQVTISLLEAR 139
           F Y+    S S+ ++      S+N VTI+  +AR
Sbjct: 633 F-YSGDGESLSRDKNQINHIASLNDVTITEFDAR 665

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LPZ9|SD113_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 OS=Arabidopsis thaliana GN=SD113 PE=1 SV=2

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 77/146 (52%), Gaps = 7/146 (4%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFY---WTDSLIFVIYYLRVANSHIFLCLW 57
           YA+ G+FS KSD+FSLGV++LEI+SG++N+ FY      +L    + L      I L   
Sbjct: 685 YAMGGLFSEKSDVFSLGVILLEIVSGRRNSSFYNDGQNPNLSAYAWKLWNTGEDIALVDP 744

Query: 58  LIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRPAFSYNIST 117
           +I         R   H  LLC Q+ A+DRP+V  V+ ML++E + L    +PAF     T
Sbjct: 745 VIFEECFENEIRRCVHVGLLCVQDHANDRPSVATVIWMLSSENSNLPEPKQPAFIPRRGT 804

Query: 118 ----SSASKTEDCSINQVTISLLEAR 139
               SS       SIN V+++ +  R
Sbjct: 805 SEVESSGQSDPRASINNVSLTKITGR 830

Receptor-like serine/threonine-protein kinase that represses the disease resistance signaling pathway triggered in response to bacterial pathogen such as Pseudomonas syringae pv. tomato.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LZU4|CRK4_ARATH Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/152 (37%), Positives = 76/152 (50%), Gaps = 21/152 (13%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLI---FVIYYLRVANSHIFLCLW 57
           YA+ G FS+KSD++S GVL+LEI+SGKKN+  Y  D       V Y  R+ ++   L L 
Sbjct: 524 YAMYGQFSMKSDVYSFGVLVLEIISGKKNSNVYQMDGTSAGNLVTYTWRLWSNGSPLELV 583

Query: 58  ---LIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRPAFSY- 113
                 N R     R   H  LLC QE A+DRPT+  +V MLT  +  L    RP F + 
Sbjct: 584 DPSFRDNYRINEVSRCI-HIALLCVQEEAEDRPTMSAIVQMLTTSSIALAVPQRPGFFFR 642

Query: 114 -------------NISTSSASKTEDCSINQVT 132
                        +I+TS+    +D SI  VT
Sbjct: 643 SSKHEQVGLVDRLSINTSALCSVDDASITNVT 674

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana GN=SD18 PE=1 SV=1

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 85/165 (51%), Gaps = 39/165 (23%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII 60
           YA++G+FS+KSD+FS GVL+LEI+S K+N  FY +D  +           ++  C+W   
Sbjct: 699 YAMDGIFSMKSDVFSFGVLLLEIISSKRNKGFYNSDRDL-----------NLLGCVWR-- 745

Query: 61  NLRHG--------IYGRTTGHWT-----------LLCAQESADDRPTVYDVVSMLTNEAT 101
           N + G        I   ++  +            LLC QE A+DRPT+  V+ ML +E+T
Sbjct: 746 NWKEGKGLEIIDPIITDSSSTFRQHEILRCIQIGLLCVQERAEDRPTMSLVILMLGSEST 805

Query: 102 TLNPSNRPAFSYN-------ISTSSASKTEDCSINQVTISLLEAR 139
           T+     P +           S+S     E  ++NQ+T+S+L+AR
Sbjct: 806 TIPQPKAPGYCLERSLLDTDSSSSKQRDDESWTVNQITVSVLDAR 850

Involved in the regulation of cellular expansion and differentiation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	139
302143124	233	unnamed protein product [Vitis vinifera]	0.942	0.562	0.483	3e-24
302143120	674	unnamed protein product [Vitis vinifera]	0.942	0.194	0.490	3e-24
359493705	830	PREDICTED: receptor-like serine/threonin	0.942	0.157	0.490	3e-24
147777156	180	hypothetical protein VITISV_021447 [Viti	0.942	0.727	0.477	2e-23
359484155	865	PREDICTED: receptor-like serine/threonin	0.942	0.151	0.483	2e-23
297742753	637	unnamed protein product [Vitis vinifera]	0.985	0.215	0.496	2e-23
56561617	637	S-receptor kinase-like protein 1 [Seneci	0.942	0.205	0.424	1e-22
302143109	515	unnamed protein product [Vitis vinifera]	0.906	0.244	0.443	4e-22
302143119	547	unnamed protein product [Vitis vinifera]	0.985	0.250	0.476	4e-22
302143114	457	unnamed protein product [Vitis vinifera]	0.978	0.297	0.482	5e-22

>gi|302143124|emb|CBI20419.3| unnamed protein product [Vitis vinifera]

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/153 (48%), Positives = 93/153 (60%), Gaps = 22/153 (14%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYY---------LRVANSH 51
           YALEG+FS KSD+FS GVL+LEILSGKKNT FY TDSL  + Y            + +  
Sbjct: 89  YALEGLFSTKSDVFSFGVLLLEILSGKKNTGFYQTDSLNLLGYVWDLWKDSRGQELMDPG 148

Query: 52  IFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRPAF 111
           +   L   I LR+   G       LLC QESADDRPT+ DVVSML NE+  L    +PAF
Sbjct: 149 LEETLPTHILLRYINVG-------LLCVQESADDRPTMSDVVSMLGNESVRLPSPKQPAF 201

Query: 112 SYNISTS-----SASKTEDCSINQVTISLLEAR 139
           S N+ +      S ++ E CS+N VT+S++EAR
Sbjct: 202 S-NLRSGVEPHISQNRPEVCSLNGVTLSVMEAR 233

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143120|emb|CBI20415.3| unnamed protein product [Vitis vinifera]

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/153 (49%), Positives = 94/153 (61%), Gaps = 22/153 (14%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYY---------LRVANSH 51
           YALEG+FS KSD+FS GVL+LEILSGKKNT FY TDSL  + Y          L + +  
Sbjct: 530 YALEGLFSTKSDVFSFGVLLLEILSGKKNTGFYQTDSLNLLGYAWDLWKDSRGLELMDPG 589

Query: 52  IFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRPAF 111
           +   L   I LR+   G       LLC QESADDRPT+ DVVSML NE+  L    +PAF
Sbjct: 590 LEETLPTHILLRYINVG-------LLCVQESADDRPTMSDVVSMLGNESVRLPSPKQPAF 642

Query: 112 SYNISTS-----SASKTEDCSINQVTISLLEAR 139
           S N+ +      S ++ E CS+N VT+S++EAR
Sbjct: 643 S-NLRSGVEPHISQNRPEVCSLNGVTLSVMEAR 674

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493705|ref|XP_003634654.1| PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like [Vitis vinifera]

 Score =  116 bits (290), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/153 (49%), Positives = 94/153 (61%), Gaps = 22/153 (14%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYY---------LRVANSH 51
           YALEG+FS KSD+FS GVL+LEILSGKKNT FY TDSL  + Y          L + +  
Sbjct: 686 YALEGLFSTKSDVFSFGVLLLEILSGKKNTGFYQTDSLNLLGYAWDLWKDSRGLELMDPG 745

Query: 52  IFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRPAF 111
           +   L   I LR+   G       LLC QESADDRPT+ DVVSML NE+  L    +PAF
Sbjct: 746 LEETLPTHILLRYINVG-------LLCVQESADDRPTMSDVVSMLGNESVRLPSPKQPAF 798

Query: 112 SYNISTS-----SASKTEDCSINQVTISLLEAR 139
           S N+ +      S ++ E CS+N VT+S++EAR
Sbjct: 799 S-NLRSGVEPHISQNRPEVCSLNGVTLSVMEAR 830

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147777156|emb|CAN65556.1| hypothetical protein VITISV_021447 [Vitis vinifera]

 Score =  114 bits (284), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/153 (47%), Positives = 92/153 (60%), Gaps = 22/153 (14%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYY---------LRVANSH 51
           YALEG+FS KSD+FS GVL+LEILSGKKNT FY TDSL  + Y            + +  
Sbjct: 36  YALEGLFSTKSDVFSFGVLLLEILSGKKNTGFYQTDSLNLLGYAWDLWKDSRGQELMDPG 95

Query: 52  IFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRPAF 111
           +   L   I LR+   G       LLC QESADDRPT+ DVVSML NE+  L    +P F
Sbjct: 96  LEETLPTHILLRYINVG-------LLCVQESADDRPTMSDVVSMLDNESVRLPSPKQPTF 148

Query: 112 SYNISTS-----SASKTEDCSINQVTISLLEAR 139
           S N+ +      S ++ E CS+N VT+S++EAR
Sbjct: 149 S-NLRSVVEPHISQNRPEICSLNGVTLSVMEAR 180

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359484155|ref|XP_002272509.2| PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like [Vitis vinifera]

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/153 (48%), Positives = 93/153 (60%), Gaps = 22/153 (14%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYY---------LRVANSH 51
           YALEG+FS KSD+FS GVL+LEILSGKKNT FY TDSL  + Y            + +  
Sbjct: 721 YALEGLFSTKSDVFSFGVLLLEILSGKKNTGFYQTDSLNLLGYAWDLWKDSRGQELMDPG 780

Query: 52  IFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRPAF 111
           +   L   I LR+   G       LLC QESADDRPT+ DVVSML NE+  L    +PAF
Sbjct: 781 LEETLPTHILLRYINIG-------LLCVQESADDRPTMSDVVSMLGNESVRLPSPKQPAF 833

Query: 112 SYNISTS-----SASKTEDCSINQVTISLLEAR 139
           S N+ +      S +K + CS+N VT+S++EAR
Sbjct: 834 S-NLRSGVEPHISQNKPKICSLNGVTLSVMEAR 865

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297742753|emb|CBI35387.3| unnamed protein product [Vitis vinifera]

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/147 (49%), Positives = 92/147 (62%), Gaps = 10/147 (6%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIY---YLRVANSHIFLCLW 57
           YALEG+FS KSD+FS GVL+LEILSGKKNT FY TDSL  + Y     + +     +   
Sbjct: 493 YALEGLFSTKSDVFSFGVLLLEILSGKKNTGFYQTDSLNLLGYAWDLWKDSRGQELMDPG 552

Query: 58  LIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRPAFSYNIST 117
           L   L   I  R   +  LLC QESADDRPT+ DVVSML NE+  L    +PAFS N+ +
Sbjct: 553 LEETLPTHILLRYI-NIGLLCVQESADDRPTMSDVVSMLGNESVRLPSPKQPAFS-NLRS 610

Query: 118 S-----SASKTEDCSINQVTISLLEAR 139
                 S +K + CS+N VT+S++EAR
Sbjct: 611 GVEPHISQNKPKICSLNGVTLSVMEAR 637

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|56561617|emb|CAG28412.1| S-receptor kinase-like protein 1 [Senecio squalidus]

 Score =  111 bits (277), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/153 (42%), Positives = 86/153 (56%), Gaps = 22/153 (14%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWL-- 58
           YA+EG FSIKSDIFS GVLMLEI++G+KNT F   D    +I Y           LW   
Sbjct: 493 YAMEGTFSIKSDIFSFGVLMLEIVTGRKNTSFVHLDRTFNLIGYA--------WELWQQG 544

Query: 59  -IINLRHGIYGRTTG--------HWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRP 109
             + L+    G T G        H  LLC QESA DRPT  D++SML N+  +L   N+P
Sbjct: 545 DTLELKDPTLGETCGIQQFLRSVHVALLCVQESATDRPTTSDMISMLLNDTISLPTPNKP 604

Query: 110 AF---SYNISTSSASKTEDCSINQVTISLLEAR 139
           AF        ++  SK +DCS+N +T++++E R
Sbjct: 605 AFVIGKVESKSTDESKEKDCSVNDMTVTVMEGR 637

Source: Senecio squalidus

Species: Senecio squalidus

Genus: Senecio

Family: Asteraceae

Order: Asterales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143109|emb|CBI20404.3| unnamed protein product [Vitis vinifera]

 Score =  109 bits (272), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/158 (44%), Positives = 91/158 (57%), Gaps = 32/158 (20%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLI- 59
           YALEG+FS KSD+FS GVL+LEI+S KKNT FY TDSL            ++  C W + 
Sbjct: 370 YALEGLFSTKSDVFSFGVLLLEIMSSKKNTGFYQTDSL------------NLLGCEWDLW 417

Query: 60  -----INLRHGIYGRTTGHWT--------LLCAQESADDRPTVYDVVSMLTNEATTLNPS 106
                 +L   + G  +   T        LLC QESA DRPT+ DVVSML NE+  L   
Sbjct: 418 RSSRAQDLMDPVLGSVSSTNTLLRYINVGLLCVQESAADRPTMSDVVSMLDNESVVLPSP 477

Query: 107 NRPAFSYNIST-----SSASKTEDCSINQVTISLLEAR 139
            +PAFS N+ +     SS ++ E CS+N VT+ ++EAR
Sbjct: 478 KQPAFS-NLRSGLELHSSGNRPEVCSVNCVTLPIMEAR 514

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143119|emb|CBI20414.3| unnamed protein product [Vitis vinifera]

 Score =  109 bits (272), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/147 (47%), Positives = 91/147 (61%), Gaps = 10/147 (6%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIY---YLRVANSHIFLCLW 57
           YALEG+FS KSD+FS GVL+LEILSGKKNT FY +DSL  + Y     + +     +   
Sbjct: 403 YALEGLFSTKSDVFSFGVLLLEILSGKKNTGFYQSDSLNLLGYAWDLWKDSRGQELMDPV 462

Query: 58  LIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRPAFSYNIST 117
           L   L   I  +   +  LLC QESADDRPT+ DVVSML NE+  L    +PAFS N+ +
Sbjct: 463 LEEALPRHILLKYI-NIGLLCVQESADDRPTMSDVVSMLGNESLHLPSPKQPAFS-NLRS 520

Query: 118 SS-----ASKTEDCSINQVTISLLEAR 139
                   ++ E CS+N VT+S++EAR
Sbjct: 521 GVEPHIFQNRPEMCSLNSVTLSIMEAR 547

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143114|emb|CBI20409.3| unnamed protein product [Vitis vinifera]

 Score =  108 bits (271), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/147 (48%), Positives = 91/147 (61%), Gaps = 11/147 (7%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIY----YLRVANSHIFLCL 56
           Y L G+FS KSD+FS GVL+LEILSGKK TEFY + SL  + Y    +       +   +
Sbjct: 314 YVLRGLFSTKSDVFSFGVLLLEILSGKKITEFYHSGSLNLLGYAWDLWKNNKGQELIDPV 373

Query: 57  WLIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRPAFSYNIS 116
              I+LRH I  R   +  LLC QESADDRPT++DVVSML  E   L+  N PAFS N+S
Sbjct: 374 LNEISLRH-IMLRYI-NVALLCVQESADDRPTMFDVVSMLVKENVLLSSPNEPAFS-NLS 430

Query: 117 T----SSASKTEDCSINQVTISLLEAR 139
           +    +S  + E CS+N VT+S + AR
Sbjct: 431 SMKPHASQDRLEICSLNDVTLSSMGAR 457

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	139
TAIR|locus:2141181	850	RK3 "receptor kinase 3" [Arabi	0.258	0.042	0.611	5.7e-17
TAIR|locus:2018506	847	RK2 "receptor kinase 2" [Arabi	0.992	0.162	0.366	2e-16
TAIR|locus:2018546	843	RK1 "receptor kinase 1" [Arabi	0.971	0.160	0.365	2.6e-16
TAIR|locus:2093397	850	CES101 "CALLUS EXPRESSION OF R	0.237	0.038	0.636	1.5e-14
TAIR|locus:2137010	849	AT4G11900 [Arabidopsis thalian	0.316	0.051	0.590	9.7e-14
TAIR|locus:2134603	665	CRK41 "cysteine-rich RLK (RECE	0.992	0.207	0.358	1.4e-13
TAIR|locus:2077147	676	CRK4 "cysteine-rich RLK (RECEP	0.920	0.189	0.389	3.8e-13
TAIR|locus:2200151	830	SD1-13 "S-domain-1 13" [Arabid	1.0	0.167	0.369	4.1e-13
TAIR|locus:2121686	645	CRK19 "cysteine-rich RLK (RECE	0.978	0.210	0.34	4.6e-13
TAIR|locus:2200908	842	AT1G61610 [Arabidopsis thalian	1.0	0.165	0.331	8.7e-13

TAIR|locus:2141181 RK3 "receptor kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 124 (48.7 bits), Expect = 5.7e-17, Sum P(2) = 5.7e-17
 Identities = 22/36 (61%), Positives = 31/36 (86%)

Query:     1 YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTD 36
             YA++G+FS+KSD+FS GVL+LEI+S K+N  FY +D
Sbjct:   699 YAMDGIFSMKSDVFSFGVLLLEIISSKRNKGFYNSD 734

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2018506 RK2 "receptor kinase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 215 (80.7 bits), Expect = 2.0e-16, P = 2.0e-16
 Identities = 56/153 (36%), Positives = 91/153 (59%)

Query:     1 YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYL-RVANSHIFLCLWLI 59
             YA++G+FS+KSD+FS GVL+LEI+SGK+N  FY ++  + ++ ++ R       L +   
Sbjct:   696 YAMDGIFSMKSDVFSFGVLLLEIISGKRNKGFYNSNRDLNLLGFVWRHWKEGKELEIVDP 755

Query:    60 INLRHGIYGRTTGHWTL-------LCAQESADDRPTVYDVVSMLTNEATTLNPSNRPAF- 111
             IN+   +      H  L       LC QE A+DRP +  V+ ML +E T +    RP F 
Sbjct:   756 INI-DALSSEFPTHEILRCIQIGLLCVQERAEDRPVMSSVMVMLGSETTAIPQPKRPGFC 814

Query:   112 ----SYNISTSSASKTED-CSINQVTISLLEAR 139
                 S  + +SS+++ +D C++NQVT+S+++AR
Sbjct:   815 VGRSSLEVDSSSSTQRDDECTVNQVTLSVIDAR 847

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0034613 "cellular protein localization" evidence=IGI

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

TAIR|locus:2018546 RK1 "receptor kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 214 (80.4 bits), Expect = 2.6e-16, P = 2.6e-16
 Identities = 57/156 (36%), Positives = 91/156 (58%)

Query:     1 YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTD---SLI-FVIYYLRVANSHIFLCL 56
             YA++G+FS+KSD+FS GVL+LEI+SGK+N  FY ++   +L+ FV  + +  N    L +
Sbjct:   692 YAMDGIFSMKSDVFSFGVLLLEIISGKRNKGFYNSNRDLNLLGFVWRHWKEGNE---LEI 748

Query:    57 WLIINLRHGIYGRTTGHWTL-------LCAQESADDRPTVYDVVSMLTNEATTLNPSNRP 109
                IN+   +  +   H  L       LC QE A+DRP +  V+ ML +E T +    RP
Sbjct:   749 VDPINI-DSLSSKFPTHEILRCIQIGLLCVQERAEDRPVMSSVMVMLGSETTAIPQPKRP 807

Query:   110 AFSYNIS------TSSASKTEDCSINQVTISLLEAR 139
              F    S      +SS  + ++C++NQ+T+S+++AR
Sbjct:   808 GFCIGRSPLEADSSSSTQRDDECTVNQITLSVIDAR 843

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0009875 "pollen-pistil interaction" evidence=TAS

GO:0016020 "membrane" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0019199 "transmembrane receptor protein kinase activity" evidence=ISS

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2093397 CES101 "CALLUS EXPRESSION OF RBCS 101" [Arabidopsis thaliana (taxid:3702)]

 Score = 112 (44.5 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
 Identities = 21/33 (63%), Positives = 26/33 (78%)

Query:     1 YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFY 33
             Y  EG+FS KSD+FS GVLMLEI+ G+KN  F+
Sbjct:   700 YFREGLFSAKSDVFSFGVLMLEIICGRKNNSFH 732

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

TAIR|locus:2137010 AT4G11900 [Arabidopsis thaliana (taxid:3702)]

 Score = 116 (45.9 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
 Identities = 26/44 (59%), Positives = 30/44 (68%)

Query:     1 YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYY 44
             YAL GV S KSDI+S GVL+LEI+SGKK T F   D    +I Y
Sbjct:   710 YALGGVISEKSDIYSFGVLLLEIISGKKATRFVHNDQKHSLIAY 753

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2134603 CRK41 "cysteine-rich RLK (RECEPTOR-like protein kinase) 41" [Arabidopsis thaliana (taxid:3702)]

 Score = 187 (70.9 bits), Expect = 1.4e-13, P = 1.4e-13
 Identities = 53/148 (35%), Positives = 81/148 (54%)

Query:     1 YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVA--NSHIFLCLWL 58
             YA+ G FS+K+D+FS GVL+LEI+ GKKN      DS +F++ Y+  +     +   +  
Sbjct:   519 YAMSGEFSVKTDVFSFGVLVLEIIKGKKNNWSPEEDSSLFLLSYVWKSWREGEVLNIVDP 578

Query:    59 IINLRHGIYGRTTG--HWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRPAFSYNIS 116
              +    G+        H  LLC QE+A+ RPT+  VV ML   + TL   ++PAF Y+  
Sbjct:   579 SLVETIGVSDEIMKCIHIGLLCVQENAESRPTMASVVVMLNANSFTLPRPSQPAF-YSGD 637

Query:   117 TSSASKTED-----CSINQVTISLLEAR 139
               S S+ ++      S+N VTI+  +AR
Sbjct:   638 GESLSRDKNQINHIASLNDVTITEFDAR 665

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2077147 CRK4 "cysteine-rich RLK (RECEPTOR-like protein kinase) 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 183 (69.5 bits), Expect = 3.8e-13, P = 3.8e-13
 Identities = 53/136 (38%), Positives = 69/136 (50%)

Query:     1 YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLI---FVIYYLRVANSHIFLCLW 57
             YA+ G FS+KSD++S GVL+LEI+SGKKN+  Y  D       V Y  R+ ++   L L 
Sbjct:   524 YAMYGQFSMKSDVYSFGVLVLEIISGKKNSNVYQMDGTSAGNLVTYTWRLWSNGSPLELV 583

Query:    58 ---LIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRPAFSYN 114
                   N R     R   H  LLC QE A+DRPT+  +V MLT  +  L    RP F + 
Sbjct:   584 DPSFRDNYRINEVSRCI-HIALLCVQEEAEDRPTMSAIVQMLTTSSIALAVPQRPGFFFR 642

Query:   115 IST-SSASKTEDCSIN 129
              S        +  SIN
Sbjct:   643 SSKHEQVGLVDRLSIN 658

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006952 "defense response" evidence=TAS

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0012501 "programmed cell death" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IEP

TAIR|locus:2200151 SD1-13 "S-domain-1 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 184 (69.8 bits), Expect = 4.1e-13, P = 4.1e-13
 Identities = 54/146 (36%), Positives = 79/146 (54%)

Query:     1 YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFY---WTDSLIFVIYYLRVANSHIFLCLW 57
             YA+ G+FS KSD+FSLGV++LEI+SG++N+ FY      +L    + L      I L   
Sbjct:   685 YAMGGLFSEKSDVFSLGVILLEIVSGRRNSSFYNDGQNPNLSAYAWKLWNTGEDIALVDP 744

Query:    58 LIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRPAFSYNIST 117
             +I         R   H  LLC Q+ A+DRP+V  V+ ML++E + L    +PAF     T
Sbjct:   745 VIFEECFENEIRRCVHVGLLCVQDHANDRPSVATVIWMLSSENSNLPEPKQPAFIPRRGT 804

Query:   118 SS--ASKTED--CSINQVTISLLEAR 139
             S   +S   D   SIN V+++ +  R
Sbjct:   805 SEVESSGQSDPRASINNVSLTKITGR 830

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

GO:0009637 "response to blue light" evidence=RCA

GO:0010155 "regulation of proton transport" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

TAIR|locus:2121686 CRK19 "cysteine-rich RLK (RECEPTOR-like protein kinase) 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 182 (69.1 bits), Expect = 4.6e-13, P = 4.6e-13
 Identities = 51/150 (34%), Positives = 77/150 (51%)

Query:     1 YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLI--FVIYYLRVANSHIFLCLWL 58
             YA+ G FS+KSD++S GVL+LEI+SG KN+  Y  D  +   V Y  R+ ++     L  
Sbjct:   499 YAMYGQFSMKSDVYSFGVLVLEIISGMKNSSLYQMDESVGNLVTYTWRLWSNGSPSEL-- 556

Query:    59 IINLRHGIYGRTTG-----HWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRPAFSY 113
              ++   G   +T+      H  LLC QE A+DRPT+  +V MLT     L     P F +
Sbjct:   557 -VDPSFGDNYQTSEITRCIHIALLCVQEDAEDRPTMSSIVQMLTTSLIALAEPRPPGFFF 615

Query:   114 NISTSSASKTED----CSINQVTISLLEAR 139
                   A  + D    CS+++ +I+ +  R
Sbjct:   616 RSKQEQAGPSIDSSTHCSVDEASITRVTPR 645

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2200908 AT1G61610 [Arabidopsis thaliana (taxid:3702)]

 Score = 181 (68.8 bits), Expect = 8.7e-13, P = 8.7e-13
 Identities = 48/145 (33%), Positives = 75/145 (51%)

Query:     1 YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTD--SLIFVIYYLRVANSHIFLCLWL 58
             YA+EG+FS KSD++S GVL+LEI+SG+KN  F  TD  SLI   ++L        +   +
Sbjct:   698 YAMEGIFSEKSDVYSFGVLILEIVSGRKNVSFRGTDHGSLIGYAWHLWSQGKTKEMIDPI 757

Query:    59 IINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRPAFSYNISTS 118
             + + R         H  +LC Q+S   RP +  V+ ML ++ + L P  +P F   +++ 
Sbjct:   758 VKDTRDVTEAMRCIHVGMLCTQDSVIHRPNMGSVLLMLESQTSQLPPPRQPTFHSFLNSG 817

Query:   119 SASKTED----CSINQVTISLLEAR 139
                   D     S+N VT + +  R
Sbjct:   818 DIELNFDGHDVASVNDVTFTTIVGR 842

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00027546001 SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (992 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	139
pfam11883	48	pfam11883, DUF3403, Domain of unknown function (DU	1e-04
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-04
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	1e-04
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-04
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	5e-04
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	7e-04
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	0.001
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	0.002
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	0.003

>gnl|CDD|221289 pfam11883, DUF3403, Domain of unknown function (DUF3403)

 Score = 37.3 bits (87), Expect = 1e-04
 Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 6/48 (12%)

Query: 98  NEATTLNPSNRPAF-----SYNISTSSASKTED-CSINQVTISLLEAR 139
           +E T +    +P F      Y   +SS+++ ++  ++NQVT+S+++AR
Sbjct: 1   SETTEIPQPKQPGFCVGRSPYETDSSSSTQRDESWTVNQVTVSVIDAR 48

This domain is functionally uncharacterized. This domain is found in eukaryotes. This presumed domain is about 50 amino acids in length. This domain is found associated with pfam00069, pfam08276, pfam00954, pfam01453. Length = 48

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 11/45 (24%)

Query: 1   YALE----GVFSIKSDIFSLGVLMLEILS-------GKKNTEFYW 34
            A E    G F+ KSD++S GVL+ EI +       G  N E   
Sbjct: 171 MAPESLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLE 215

Length = 258

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 14/94 (14%)

Query: 4   EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINL 62
           EG F+ KSD++S GVL+ EI + G+   E Y   S   V+ YL+         L    N 
Sbjct: 178 EGKFTSKSDVWSFGVLLWEIFTLGE---EPYPGMSNAEVLEYLKKGYR-----LPKPPNC 229

Query: 63  RHGIYGRTTGHWTLLCAQESADDRPTVYDVVSML 96
              +Y        L C  E  +DRPT  ++V +L
Sbjct: 230 PPELY-----KLMLQCWAEDPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 39.4 bits (93), Expect = 2e-04
 Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 14/94 (14%)

Query: 4   EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINL 62
           EG F+ KSD++S GVL+ EI + G+   + Y   S   V+ YL+         L    N 
Sbjct: 177 EGKFTSKSDVWSFGVLLWEIFTLGE---QPYPGMSNEEVLEYLKNGYR-----LPQPPNC 228

Query: 63  RHGIYGRTTGHWTLLCAQESADDRPTVYDVVSML 96
              +Y        L C  E  +DRPT  ++V +L
Sbjct: 229 PPELY-----DLMLQCWAEDPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 38.3 bits (90), Expect = 5e-04
 Identities = 11/22 (50%), Positives = 18/22 (81%)

Query: 4   EGVFSIKSDIFSLGVLMLEILS 25
           +G+F+ KSD++S GVL+ EI +
Sbjct: 181 DGIFTSKSDVWSFGVLLWEIFT 202

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 37.8 bits (88), Expect = 7e-04
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 7/36 (19%)

Query: 3   LEGVFSIKSDIFSLGVLMLEILS-------GKKNTE 31
           L+G+F+ K+D++S GVL+ EI S       G+ N E
Sbjct: 194 LDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE 229

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 37.4 bits (87), Expect = 0.001
 Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 26/98 (26%)

Query: 7   FSIKSDIFSLGVLMLEILS-------GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLI 59
           FS KSD++S GVLM E+ S          N+E   + S  + +Y  ++A + ++  ++  
Sbjct: 178 FSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPKLAPTEVYTIMY-- 235

Query: 60  INLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLT 97
                             C  E  +DRP    ++S LT
Sbjct: 236 -----------------SCWHEKPEDRPAFKKLLSQLT 256

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 36.5 bits (85), Expect = 0.002
 Identities = 12/22 (54%), Positives = 17/22 (77%)

Query: 2   ALEGVFSIKSDIFSLGVLMLEI 23
           A  G F+IKSD++S G+L+ EI
Sbjct: 176 ANYGRFTIKSDVWSFGILLTEI 197

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 35.9 bits (83), Expect = 0.003
 Identities = 12/23 (52%), Positives = 16/23 (69%)

Query: 3   LEGVFSIKSDIFSLGVLMLEILS 25
            E  FS KSD++S GVLM E+ +
Sbjct: 191 QEDDFSTKSDVWSFGVLMWEVFT 213

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	139
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.66
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.64
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.55
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.55
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.53
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.5
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.48
PHA02988	283	hypothetical protein; Provisional	99.45
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.43
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.43
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.42
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.4
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.38
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.37
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.35
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.32
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.32
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.31
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.28
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.28
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.27
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.25
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.24
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.24
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.24
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.23
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.23
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.23
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.23
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.22
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.22
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.22
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.22
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.22
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.22
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.22
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.21
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.21
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.21
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.21
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.21
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.2
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.2
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.2
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.2
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.2
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.19
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.19
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.19
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.19
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.19
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.19
PHA02882	294	putative serine/threonine kinase; Provisional	99.19
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.19
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.19
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.19
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.19
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.18
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.18
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.18
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.18
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.18
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.18
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.17
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.17
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.17
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.16
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.16
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.16
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.15
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.15
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.15
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.15
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.15
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.14
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.14
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.14
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.14
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.14
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.14
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.14
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.13
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.12
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.12
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.12
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.12
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.12
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.11
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.11
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.11
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.1
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.1
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.1
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.1
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.1
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.1
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.09
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.09
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.09
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.09
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.09
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.08
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.08
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.08
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.08
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.08
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.07
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.06
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.06
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.06
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.06
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.05
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.05
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.04
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.04
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.04
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.04
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.04
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.03
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.03
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.03
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.03
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.02
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.02
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.02
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.01
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.01
KOG0578	550	consensus p21-activated serine/threonine protein k	99.01
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.01
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.01
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	98.99
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	98.99
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	98.99
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.99
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	98.99
PTZ00283	496	serine/threonine protein kinase; Provisional	98.99
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	98.99
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	98.99
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	98.98
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	98.98
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	98.98
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	98.98
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	98.98
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	98.98
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	98.97
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	98.97
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	98.97
KOG0201	467	consensus Serine/threonine protein kinase [Signal	98.97
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	98.97
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	98.96
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	98.96
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.96
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	98.96
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	98.95
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	98.95
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	98.94
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	98.94
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	98.94
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	98.94
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	98.94
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	98.93
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	98.93
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	98.92
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	98.92
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	98.92
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	98.92
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	98.91
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	98.91
PTZ00267	478	NIMA-related protein kinase; Provisional	98.91
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	98.91
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	98.9
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	98.9
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	98.9
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	98.9
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	98.9
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	98.89
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	98.89
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	98.89
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	98.89
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	98.89
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	98.89
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	98.89
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	98.89
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	98.87
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	98.87
KOG0198	313	consensus MEKK and related serine/threonine protei	98.87
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.87
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	98.86
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	98.86
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	98.86
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	98.86
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	98.86
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	98.86
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	98.86
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	98.85
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	98.85
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	98.85
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	98.85
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	98.85
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	98.85
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	98.85
PTZ00284	467	protein kinase; Provisional	98.85
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	98.84
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	98.84
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.84
PTZ00263	329	protein kinase A catalytic subunit; Provisional	98.84
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.83
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	98.83
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	98.83
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	98.83
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	98.83
KOG0582	516	consensus Ste20-like serine/threonine protein kina	98.82
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	98.82
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	98.82
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	98.81
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	98.81
PTZ00266	1021	NIMA-related protein kinase; Provisional	98.81
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	98.81
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	98.81
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	98.8
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	98.8
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.8
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	98.8
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	98.8
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	98.79
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	98.79
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	98.79
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	98.79
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	98.79
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	98.78
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	98.78
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	98.78
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	98.78
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	98.78
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	98.78
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	98.77
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	98.77
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	98.76
KOG0575	592	consensus Polo-like serine/threonine protein kinas	98.76
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	98.76
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	98.76
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	98.75
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	98.75
PLN00181	793	protein SPA1-RELATED; Provisional	98.75
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	98.75
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	98.74
KOG1989	738	consensus ARK protein kinase family [Signal transd	98.74
PTZ00036	440	glycogen synthase kinase; Provisional	98.74
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	98.74
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	98.74
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	98.74
PHA03207	392	serine/threonine kinase US3; Provisional	98.74
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	98.74
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	98.74
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	98.73
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.73
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	98.73
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	98.73
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	98.73
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	98.73
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	98.73
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	98.72
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	98.72
KOG0661	538	consensus MAPK related serine/threonine protein ki	98.72
KOG0589	426	consensus Serine/threonine protein kinase [General	98.72
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	98.72
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	98.72
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	98.72
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	98.71
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	98.71
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	98.71
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	98.71
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	98.71
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	98.71
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	98.71
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	98.7
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	98.7
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.7
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	98.7
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.7
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	98.7
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	98.69
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	98.69
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	98.69
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.69
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.69
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	98.68
PHA03209	357	serine/threonine kinase US3; Provisional	98.68
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	98.66
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	98.66
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	98.66
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	98.66
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	98.66
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	98.66
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	98.65
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	98.65
PLN00009	294	cyclin-dependent kinase A; Provisional	98.65
KOG0584	632	consensus Serine/threonine protein kinase [General	98.65
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	98.64
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	98.64
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	98.64
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	98.64
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	98.63
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	98.62
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	98.62
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	98.61
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	98.61
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	98.61
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	98.61
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	98.6
PHA03212	391	serine/threonine kinase US3; Provisional	98.6
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	98.6
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	98.6
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	98.59
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.58
PHA03211	461	serine/threonine kinase US3; Provisional	98.57
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	98.57
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.57
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	98.57
PTZ00024	335	cyclin-dependent protein kinase; Provisional	98.56
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	98.55
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	98.55
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	98.54
PHA03210	501	serine/threonine kinase US3; Provisional	98.53
KOG0583	370	consensus Serine/threonine protein kinase [Signal	98.51
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	98.49
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	98.49
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	98.47
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.45
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.45
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.44
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	98.43
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	98.42
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	98.41
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	98.41
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	98.41
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	98.4
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	98.4
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	98.36
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	98.33
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	98.27
KOG4717	864	consensus Serine/threonine protein kinase [Signal	98.23
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	98.23
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	98.23
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	98.22
KOG2052	513	consensus Activin A type IB receptor, serine/threo	98.21
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	98.14
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	98.14
KOG0694	694	consensus Serine/threonine protein kinase [Signal	98.14
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	98.13
KOG0577	948	consensus Serine/threonine protein kinase [Signal	98.12
KOG0595	429	consensus Serine/threonine-protein kinase involved	98.11
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	98.11
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	98.06
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	98.05
KOG0598	357	consensus Ribosomal protein S6 kinase and related	98.01
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	97.93
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	97.91
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	97.91
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	97.91
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	97.9
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	97.9
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	97.9
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	97.87
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	97.86
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	97.85
KOG1290	590	consensus Serine/threonine protein kinase [Signal	97.8
KOG3653	534	consensus Transforming growth factor beta/activin	97.77
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	97.76
KOG0605	550	consensus NDR and related serine/threonine kinases	97.72
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	97.71
KOG0610	459	consensus Putative serine/threonine protein kinase	97.7
KOG0611	668	consensus Predicted serine/threonine protein kinas	97.69
KOG0696	683	consensus Serine/threonine protein kinase [Signal	97.62
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	97.52
KOG0695	593	consensus Serine/threonine protein kinase [Signal	97.41
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	97.33
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	97.31
KOG0690	516	consensus Serine/threonine protein kinase [Signal	97.31
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	97.26
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	97.23
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	97.13
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	97.07
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	97.04
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	97.02
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	97.0
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	97.0
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	96.93
KOG0586	596	consensus Serine/threonine protein kinase [General	96.89
PLN03224	507	probable serine/threonine protein kinase; Provisio	96.75
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	96.74
KOG1027	903	consensus Serine/threonine protein kinase and endo	96.73
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	96.67
KOG0576	829	consensus Mitogen-activated protein kinase kinase	96.5
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	96.47
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	96.29
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	96.28
PF11883	48	DUF3403: Domain of unknown function (DUF3403); Int	96.23
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	96.23
KOG0607	463	consensus MAP kinase-interacting kinase and relate	95.94
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	95.85
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	95.74
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	95.43
KOG1167	418	consensus Serine/threonine protein kinase of the C	94.97
KOG0590	601	consensus Checkpoint kinase and related serine/thr	93.53
KOG1266	458	consensus Protein kinase [Signal transduction mech	93.0
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	91.7
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	87.49
COG0515	384	SPS1 Serine/threonine protein kinase [General func	86.25
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	85.33
KOG1093	725	consensus Predicted protein kinase (contains TBC a	82.5

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.66  E-value=1.2e-16  Score=121.58  Aligned_cols=87  Identities=26%  Similarity=0.290  Sum_probs=69.9

Q ss_pred             CCCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcc
Q 047465            2 ALEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQ   80 (139)
Q Consensus         2 ~~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~   80 (139)
                      +.++.|+.|||||||||++|||++ |+.|++     ..... .+...+..|...       .||..++..++++|..||.
T Consensus       376 ~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~-----~msn~-ev~~~le~GyRl-------p~P~~CP~~vY~lM~~CW~  442 (468)
T KOG0197|consen  376 LNYGKFSSKSDVWSFGVLLWELFTYGRVPYP-----GMSNE-EVLELLERGYRL-------PRPEGCPDEVYELMKSCWH  442 (468)
T ss_pred             HhhCCcccccceeehhhhHHHHhccCCCCCC-----CCCHH-HHHHHHhccCcC-------CCCCCCCHHHHHHHHHHhh
Confidence            467889999999999999999999 566654     22222 244566777766       4588888899999999999


Q ss_pred             cCCCCCCCHHHHHHHHhcccC
Q 047465           81 ESADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        81 ~~p~~Rps~~~v~~~L~~~~~  101 (139)
                      .+|++||||..+...|+....
T Consensus       443 ~~P~~RPtF~~L~~~l~~~~~  463 (468)
T KOG0197|consen  443 EDPEDRPTFETLREVLEDFFT  463 (468)
T ss_pred             CCcccCCCHHHHHHHHHHhhh
Confidence            999999999999888887654

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.64  E-value=2.4e-16  Score=125.54  Aligned_cols=87  Identities=25%  Similarity=0.282  Sum_probs=68.7

Q ss_pred             CCCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcc
Q 047465            2 ALEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQ   80 (139)
Q Consensus         2 ~~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~   80 (139)
                      +.+++|+++||||||||++|||++ |+.|+-..-  ..    -|...+..+...   +    +|..++..++.||+.||+
T Consensus       677 Ily~kFTteSDVWs~GVvLWEIFsyG~QPy~glS--n~----EVIe~i~~g~lL---~----~Pe~CP~~vY~LM~~CW~  743 (774)
T KOG1026|consen  677 ILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS--NQ----EVIECIRAGQLL---S----CPENCPTEVYSLMLECWN  743 (774)
T ss_pred             hhcCcccchhhhhhhhhhhhhhhccccCcccccc--hH----HHHHHHHcCCcc---c----CCCCCCHHHHHHHHHHhh
Confidence            468999999999999999999998 666663211  22    244445556554   2    277788899999999999


Q ss_pred             cCCCCCCCHHHHHHHHhcccC
Q 047465           81 ESADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        81 ~~p~~Rps~~~v~~~L~~~~~  101 (139)
                      .+|.+||+|++|...|+....
T Consensus       744 ~~P~~RPsF~eI~~~L~~~~~  764 (774)
T KOG1026|consen  744 ENPKRRPSFKEIHSRLQAWAQ  764 (774)
T ss_pred             cCcccCCCHHHHHHHHHHHHh
Confidence            999999999999999998765

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.55  E-value=1.5e-14  Score=113.32  Aligned_cols=86  Identities=20%  Similarity=0.173  Sum_probs=68.6

Q ss_pred             CCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      -+..|+.|+|||+||+++|||.+ |-.|++..+     + ..++..++.+..+       .+|.-|+..++++|..||+.
T Consensus       439 AyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid-----l-SqVY~LLEkgyRM-------~~PeGCPpkVYeLMraCW~W  505 (1157)
T KOG4278|consen  439 AYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID-----L-SQVYGLLEKGYRM-------DGPEGCPPKVYELMRACWNW  505 (1157)
T ss_pred             cccccccchhhHHHHHHHHHHHhcCCCCCCCcc-----H-HHHHHHHhccccc-------cCCCCCCHHHHHHHHHHhcC
Confidence            35689999999999999999988 667776332     1 2356667777766       33777777999999999999


Q ss_pred             CCCCCCCHHHHHHHHhcccC
Q 047465           82 SADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~~~~~  101 (139)
                      +|.+||+|.++.+.++++..
T Consensus       506 sPsDRPsFaeiHqafEtmf~  525 (1157)
T KOG4278|consen  506 SPSDRPSFAEIHQAFETMFS  525 (1157)
T ss_pred             CcccCccHHHHHHHHHHHhc
Confidence            99999999999998876543

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.55  E-value=1.6e-14  Score=108.80  Aligned_cols=96  Identities=25%  Similarity=0.423  Sum_probs=79.1

Q ss_pred             CCCCCCCCccchhhhHhHHHHHHHhCCCCCCcCCc-CchHHHHHHHHHhhccchhhhhhhhccCCCCC----H--H---H
Q 047465            1 YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWT-DSLIFVIYYLRVANSHIFLCLWLIINLRHGIY----G--R---T   70 (139)
Q Consensus         1 ~~~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~----~--~---~   70 (139)
                      |...|.++.|+|||||||+++|+++|+++.+.... ....+..|+...+..+...   +++|  |.+.    .  .   .
T Consensus       249 y~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~---eiiD--~~l~~~~~~~~~~~~~  323 (361)
T KOG1187|consen  249 YASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLR---EIVD--PRLKEGEYPDEKEVKK  323 (361)
T ss_pred             hhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchh---heeC--CCccCCCCChHHHHHH
Confidence            45668899999999999999999999998875442 2555889998888888777   9999  7754    1  1   5


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHhcccC
Q 047465           71 TGHWTLLCAQESADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        71 ~~~l~~~C~~~~p~~Rps~~~v~~~L~~~~~  101 (139)
                      +..++.+|.+.+|.+||+|.+|+..|+....
T Consensus       324 ~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~  354 (361)
T KOG1187|consen  324 LAELALRCLRPDPKERPTMSQVVKELEGILS  354 (361)
T ss_pred             HHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence            7789999999999999999999999965554

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.53  E-value=4.2e-14  Score=106.37  Aligned_cols=88  Identities=20%  Similarity=0.238  Sum_probs=65.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ...|+.|+|||||||++|||++|+.||...     .....+......+..+   .+    |..+...+..++..||+.+|
T Consensus       220 ~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~-----~~~~~~~~v~~~~~Rp---~~----p~~~~~~l~~l~~~CW~~dp  287 (362)
T KOG0192|consen  220 KSPYTEKSDVYSFGIVLWELLTGEIPFEDL-----APVQVASAVVVGGLRP---PI----PKECPPHLSSLMERCWLVDP  287 (362)
T ss_pred             CCcCCccchhhhHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHhcCCCC---CC----CccCCHHHHHHHHHhCCCCC
Confidence            347999999999999999999999999643     2223233333344444   33    33344588999999999999


Q ss_pred             CCCCCHHHHHHHHhcccCCC
Q 047465           84 DDRPTVYDVVSMLTNEATTL  103 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~~~  103 (139)
                      ..||+|.+++..|+.+....
T Consensus       288 ~~RP~f~ei~~~l~~~~~~~  307 (362)
T KOG0192|consen  288 SRRPSFLEIVSRLESIMSHI  307 (362)
T ss_pred             CcCCCHHHHHHHHHHHHHhh
Confidence            99999999999998765533

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.50  E-value=4.1e-14  Score=116.21  Aligned_cols=88  Identities=24%  Similarity=0.313  Sum_probs=66.1

Q ss_pred             CCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      ..+.|++|+|||||||++||+++ |..|++....     .+........+++.      .  |..++..++++|.+||+.
T Consensus       877 ~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n-----~~v~~~~~~ggRL~------~--P~~CP~~ly~lM~~CW~~  943 (1025)
T KOG1095|consen  877 KDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN-----FEVLLDVLEGGRLD------P--PSYCPEKLYQLMLQCWKH  943 (1025)
T ss_pred             hhcccccccchhhhHHHHHHHHhCCCCCCCCcch-----HHHHHHHHhCCccC------C--CCCCChHHHHHHHHHccC
Confidence            45789999999999999999999 6777753221     12122233444332      2  777777999999999999


Q ss_pred             CCCCCCCHHHHHHHHhcccCCC
Q 047465           82 SADDRPTVYDVVSMLTNEATTL  103 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~~~~~~~  103 (139)
                      +|++||+|..++..+..+.+.+
T Consensus       944 ~pe~RP~F~~i~~q~~~i~~~~  965 (1025)
T KOG1095|consen  944 DPEDRPSFRTIVEQDPAISNAA  965 (1025)
T ss_pred             ChhhCccHHHHHhhhhhhhhhh
Confidence            9999999999999887765543

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.48  E-value=8.4e-14  Score=104.02  Aligned_cols=85  Identities=19%  Similarity=0.165  Sum_probs=66.0

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ...|++++||||||+++||+++ |+.|+.+.++.+.      .-.+.+|.     .+.+  |-.++.+++.+|..||+..
T Consensus       472 n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm------~~ylkdGy-----RlaQ--P~NCPDeLf~vMacCWall  538 (563)
T KOG1024|consen  472 NSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEM------EHYLKDGY-----RLAQ--PFNCPDELFTVMACCWALL  538 (563)
T ss_pred             hhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHH------HHHHhccc-----eecC--CCCCcHHHHHHHHHHHhcC
Confidence            4568999999999999999998 7788765544321      12233444     3344  7777779999999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |++||++++++..|...+.
T Consensus       539 peeRPsf~Qlv~cLseF~~  557 (563)
T KOG1024|consen  539 PEERPSFSQLVICLSEFHT  557 (563)
T ss_pred             cccCCCHHHHHHHHHHHHH
Confidence            9999999999999887554

>PHA02988 hypothetical protein; Provisional

Probab=99.45  E-value=2.8e-13  Score=98.56  Aligned_cols=84  Identities=25%  Similarity=0.278  Sum_probs=59.9

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +.++.++||||||+++||+++|+.||.....  .   .........+...   ..    |......+.+++.+||+.+|.
T Consensus       197 ~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~--~---~~~~~i~~~~~~~---~~----~~~~~~~l~~li~~cl~~dp~  264 (283)
T PHA02988        197 SEYTIKDDIYSLGVVLWEIFTGKIPFENLTT--K---EIYDLIINKNNSL---KL----PLDCPLEIKCIVEACTSHDSI  264 (283)
T ss_pred             ccccchhhhhHHHHHHHHHHHCCCCCCCCCH--H---HHHHHHHhcCCCC---CC----CCcCcHHHHHHHHHHhcCCcc
Confidence            5688999999999999999999999863321  1   1111111122211   11    222344889999999999999


Q ss_pred             CCCCHHHHHHHHhccc
Q 047465           85 DRPTVYDVVSMLTNEA  100 (139)
Q Consensus        85 ~Rps~~~v~~~L~~~~  100 (139)
                      +||++.+++..|+...
T Consensus       265 ~Rps~~ell~~l~~~~  280 (283)
T PHA02988        265 KRPNIKEILYNLSLYK  280 (283)
T ss_pred             cCcCHHHHHHHHHHHH
Confidence            9999999999998754

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.43  E-value=2.9e-14  Score=113.50  Aligned_cols=89  Identities=21%  Similarity=0.204  Sum_probs=69.4

Q ss_pred             CCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      -+.+|++++|||||||+|||+++ |.+|+=+      -....+...++++...     ..  |..++..+++||+.||++
T Consensus       807 a~RKFTsASDVWSyGIVmWEVmSyGERPYWd------mSNQdVIkaIe~gyRL-----Pp--PmDCP~aL~qLMldCWqk  873 (996)
T KOG0196|consen  807 AYRKFTSASDVWSYGIVMWEVMSYGERPYWD------MSNQDVIKAIEQGYRL-----PP--PMDCPAALYQLMLDCWQK  873 (996)
T ss_pred             hhcccCchhhccccceEEEEecccCCCcccc------cchHHHHHHHHhccCC-----CC--CCCCcHHHHHHHHHHHHH
Confidence            46789999999999999999987 7888621      1112344556666643     22  666677999999999999


Q ss_pred             CCCCCCCHHHHHHHHhcccCCCC
Q 047465           82 SADDRPTVYDVVSMLTNEATTLN  104 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~~~~~~~~  104 (139)
                      +-..||.|.+++..|.++...+.
T Consensus       874 dR~~RP~F~qiV~~lDklIrnP~  896 (996)
T KOG0196|consen  874 DRNRRPKFAQIVSTLDKLIRNPN  896 (996)
T ss_pred             HhhcCCCHHHHHHHHHHHhcCch
Confidence            99999999999999999887543

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.43  E-value=3.3e-13  Score=112.32  Aligned_cols=94  Identities=21%  Similarity=0.321  Sum_probs=67.6

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCH------H---HHHH
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYG------R---TTGH   73 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~------~---~~~~   73 (139)
                      .+..++.++|||||||++||+++|+.|++...........|+..........   .+.|  |.+..      .   .+.+
T Consensus       851 ~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~  925 (968)
T PLN00113        851 ETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLD---MWID--PSIRGDVSVNQNEIVEVMN  925 (968)
T ss_pred             cCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchh---heeC--ccccCCCCccHHHHHHHHH
Confidence            4567889999999999999999999998543322334555554433333333   3444  33211      1   5678


Q ss_pred             HHHHhcccCCCCCCCHHHHHHHHhcccC
Q 047465           74 WTLLCAQESADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        74 l~~~C~~~~p~~Rps~~~v~~~L~~~~~  101 (139)
                      ++.+||+.+|.+||+|.++++.|++...
T Consensus       926 l~~~Cl~~~P~~RPt~~evl~~L~~~~~  953 (968)
T PLN00113        926 LALHCTATDPTARPCANDVLKTLESASR  953 (968)
T ss_pred             HHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence            9999999999999999999999998766

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.42  E-value=4.5e-13  Score=106.99  Aligned_cols=84  Identities=21%  Similarity=0.288  Sum_probs=65.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ...|+.|+|||||||++|||++ |..|++.... ..   + +...+..|...       .+|..+..+++.+|..||+.+
T Consensus       495 ~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~-~~---~-l~~~l~~G~r~-------~~P~~c~~eiY~iM~~CW~~~  562 (609)
T KOG0200|consen  495 DRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP-TE---E-LLEFLKEGNRM-------EQPEHCSDEIYDLMKSCWNAD  562 (609)
T ss_pred             cCcccccchhhHHHHHHHHHhhCCCCCCCCCCc-HH---H-HHHHHhcCCCC-------CCCCCCCHHHHHHHHHHhCCC
Confidence            4578999999999999999999 6677653211 11   1 23355667655       237777779999999999999


Q ss_pred             CCCCCCHHHHHHHHhcc
Q 047465           83 ADDRPTVYDVVSMLTNE   99 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~   99 (139)
                      |++||+|.++...++..
T Consensus       563 p~~RP~F~~~~~~~~~~  579 (609)
T KOG0200|consen  563 PEDRPTFSECVEFFEKH  579 (609)
T ss_pred             cccCCCHHHHHHHHHHH
Confidence            99999999999999884

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.40  E-value=5.5e-13  Score=105.55  Aligned_cols=81  Identities=20%  Similarity=0.188  Sum_probs=62.6

Q ss_pred             CCCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcc
Q 047465            2 ALEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQ   80 (139)
Q Consensus         2 ~~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~   80 (139)
                      ++.++|+.++|||+|||.+|||++ |..|+.....     .+ +...+..+...       .||..+...++.+|..||+
T Consensus       287 Lrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g-----~q-IL~~iD~~erL-------pRPk~csedIY~imk~cWa  353 (1039)
T KOG0199|consen  287 LRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG-----IQ-ILKNIDAGERL-------PRPKYCSEDIYQIMKNCWA  353 (1039)
T ss_pred             hccccccccchhhhhhhhHHhhhccCCCCCCCCCH-----HH-HHHhccccccC-------CCCCCChHHHHHHHHHhcc
Confidence            467889999999999999999998 6788753221     11 22333344433       4588888899999999999


Q ss_pred             cCCCCCCCHHHHHHH
Q 047465           81 ESADDRPTVYDVVSM   95 (139)
Q Consensus        81 ~~p~~Rps~~~v~~~   95 (139)
                      .+|.+||+|..+..+
T Consensus       354 h~paDRptFsair~~  368 (1039)
T KOG0199|consen  354 HNPADRPTFSAIRED  368 (1039)
T ss_pred             CCccccccHHHHHHh
Confidence            999999999999744

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.38  E-value=3.3e-13  Score=104.90  Aligned_cols=89  Identities=18%  Similarity=0.187  Sum_probs=65.4

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +....++|+||||||||+|||+||..|+...+.     ...+|..-....     .+.-  |.-++..+.-++.+||+-.
T Consensus       284 rnePcsEKVDIwSfGVVLWEmLT~EiPYkdVds-----sAIIwGVGsNsL-----~Lpv--PstcP~GfklL~Kqcw~sK  351 (904)
T KOG4721|consen  284 RNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDS-----SAIIWGVGSNSL-----HLPV--PSTCPDGFKLLLKQCWNSK  351 (904)
T ss_pred             hcCCcccccceehhHHHHHHHHhcCCCccccch-----heeEEeccCCcc-----cccC--cccCchHHHHHHHHHHhcC
Confidence            456689999999999999999999999865432     112222222222     2222  6666668888999999999


Q ss_pred             CCCCCCHHHHHHHHhcccCCC
Q 047465           83 ADDRPTVYDVVSMLTNEATTL  103 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~~~  103 (139)
                      |..||+|.+++..|+-...-+
T Consensus       352 pRNRPSFrqil~HldIa~pel  372 (904)
T KOG4721|consen  352 PRNRPSFRQILLHLDIASPEL  372 (904)
T ss_pred             CCCCccHHHHHHHHhhcCHHH
Confidence            999999999999998654433

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.37  E-value=1.6e-12  Score=87.97  Aligned_cols=91  Identities=18%  Similarity=0.113  Sum_probs=56.5

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCH--HHHHHHHHHhcc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYG--RTTGHWTLLCAQ   80 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~--~~~~~l~~~C~~   80 (139)
                      .++.++.++||||||+++|||++|+.|+.........+.... .........   ....  +....  ..+.+++.+||+
T Consensus        77 ~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~--~~~~~~~~~~~~~i~~cl~  150 (176)
T smart00750       77 QGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILL-NGMPADDPR---DRSN--LESVSAARSFADFMRVCAS  150 (176)
T ss_pred             cCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHH-HHhccCCcc---cccc--HHHHHhhhhHHHHHHHHHh
Confidence            456788999999999999999999999853221111111111 111111000   0000  00001  147889999999


Q ss_pred             cCCCCCCCHHHHHHHHhcc
Q 047465           81 ESADDRPTVYDVVSMLTNE   99 (139)
Q Consensus        81 ~~p~~Rps~~~v~~~L~~~   99 (139)
                      .+|.+||++.+++..+...
T Consensus       151 ~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      151 RLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             cccccccCHHHHHHHHHHH
Confidence            9999999999999877543

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.35  E-value=3.8e-13  Score=105.39  Aligned_cols=87  Identities=20%  Similarity=0.128  Sum_probs=67.3

Q ss_pred             CCCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcc
Q 047465            2 ALEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQ   80 (139)
Q Consensus         2 ~~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~   80 (139)
                      ++..+|+.++|||-||+++|||+. |.+||.....      ..+...++.|...   +.    |..++..++.+|.+||+
T Consensus       564 INfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN------sDVI~~iEnGeRl---P~----P~nCPp~LYslmskcWa  630 (974)
T KOG4257|consen  564 INFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN------SDVIGHIENGERL---PC----PPNCPPALYSLMSKCWA  630 (974)
T ss_pred             cchhcccchhhHHHHHHHHHHHHHhcCCccccccc------cceEEEecCCCCC---CC----CCCCChHHHHHHHHHhc
Confidence            356789999999999999999987 8889853321      1133445666654   33    66777789999999999


Q ss_pred             cCCCCCCCHHHHHHHHhcccC
Q 047465           81 ESADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        81 ~~p~~Rps~~~v~~~L~~~~~  101 (139)
                      .+|.+||.|.++...|+.+..
T Consensus       631 yeP~kRPrftei~~~lsdv~q  651 (974)
T KOG4257|consen  631 YEPSKRPRFTEIKAILSDVLQ  651 (974)
T ss_pred             cCcccCCcHHHHHHHHHHHHH
Confidence            999999999999988876544

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.32  E-value=3.4e-12  Score=94.68  Aligned_cols=86  Identities=22%  Similarity=0.264  Sum_probs=60.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||||+++|||++ |..|+..... ...    .......+...   ..    +......+..++..||+.+
T Consensus       250 ~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~-~~~----~~~~~~~~~~~---~~----~~~~~~~l~~li~~cl~~d  317 (338)
T cd05102         250 DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI-NEE----FCQRLKDGTRM---RA----PENATPEIYRIMLACWQGD  317 (338)
T ss_pred             cCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCc-cHH----HHHHHhcCCCC---CC----CCCCCHHHHHHHHHHccCC
Confidence            4567899999999999999997 8888764322 111    11122222221   11    3333347889999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.++++.|+++..
T Consensus       318 p~~RPs~~el~~~l~~~~~  336 (338)
T cd05102         318 PKERPTFSALVEILGDLLQ  336 (338)
T ss_pred             hhhCcCHHHHHHHHHHHHh
Confidence            9999999999999987643

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.32  E-value=2.3e-12  Score=92.49  Aligned_cols=79  Identities=24%  Similarity=0.319  Sum_probs=52.5

Q ss_pred             CCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ..++.++||||||+++||+++ ++.|+....  ..   ... ..+..+...   ..    +......+..++.+||+.+|
T Consensus       180 ~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~--~~---~~~-~~~~~~~~~---~~----~~~~~~~~~~li~~C~~~~p  246 (259)
T PF07714_consen  180 GEYTKKSDVYSFGMLLYEILTLGKFPFSDYD--NE---EII-EKLKQGQRL---PI----PDNCPKDIYSLIQQCWSHDP  246 (259)
T ss_dssp             SEESHHHHHHHHHHHHHHHHTTSSGTTTTSC--HH---HHH-HHHHTTEET---TS----BTTSBHHHHHHHHHHT-SSG
T ss_pred             ccccccccccccccccccccccccccccccc--cc---ccc-ccccccccc---ee----ccchhHHHHHHHHHHcCCCh
Confidence            447889999999999999999 567765331  11   112 122233322   11    33334488999999999999


Q ss_pred             CCCCCHHHHHHHH
Q 047465           84 DDRPTVYDVVSML   96 (139)
Q Consensus        84 ~~Rps~~~v~~~L   96 (139)
                      .+||++.++++.|
T Consensus       247 ~~RPs~~~i~~~L  259 (259)
T PF07714_consen  247 EKRPSFQEILQEL  259 (259)
T ss_dssp             GGS--HHHHHHHH
T ss_pred             hhCcCHHHHHhcC
Confidence            9999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.31  E-value=5.9e-12  Score=90.90  Aligned_cols=82  Identities=24%  Similarity=0.292  Sum_probs=58.0

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||++++|+++ |..|+.....  ..    ....+..+...   ..    +...+..+..++..||+.+
T Consensus       200 ~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~--~~----~~~~i~~~~~~---~~----~~~~~~~~~~l~~~c~~~~  266 (283)
T cd05048         200 YGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN--QE----VIEMIRSRQLL---PC----PEDCPARVYALMIECWNEI  266 (283)
T ss_pred             cCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH--HH----HHHHHHcCCcC---CC----cccCCHHHHHHHHHHccCC
Confidence            4567889999999999999998 8888743221  11    11222222222   11    2233348899999999999


Q ss_pred             CCCCCCHHHHHHHHhc
Q 047465           83 ADDRPTVYDVVSMLTN   98 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~   98 (139)
                      |.+||++.+++..|++
T Consensus       267 p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         267 PARRPRFKDIHTRLRS  282 (283)
T ss_pred             hhhCcCHHHHHHHHhc
Confidence            9999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.28  E-value=1.2e-11  Score=89.47  Aligned_cols=86  Identities=21%  Similarity=0.192  Sum_probs=60.8

Q ss_pred             CCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      .++.++.++||||||+++||+++ |+.|+.....  ..    .......+...     ..  +......+..++..||..
T Consensus       184 ~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--~~----~~~~~~~~~~~-----~~--~~~~~~~~~~li~~c~~~  250 (279)
T cd05111         184 LFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP--HE----VPDLLEKGERL-----AQ--PQICTIDVYMVMVKCWMI  250 (279)
T ss_pred             ccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH--HH----HHHHHHCCCcC-----CC--CCCCCHHHHHHHHHHcCC
Confidence            34668899999999999999998 8888753211  11    11222222222     11  334444778899999999


Q ss_pred             CCCCCCCHHHHHHHHhcccC
Q 047465           82 SADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~~~~~  101 (139)
                      +|.+||++.+++..|..+..
T Consensus       251 ~p~~Rps~~el~~~l~~~~~  270 (279)
T cd05111         251 DENVRPTFKELANEFTRMAR  270 (279)
T ss_pred             CcccCcCHHHHHHHHHHHHh
Confidence            99999999999999988665

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.28  E-value=9.5e-12  Score=90.48  Aligned_cols=86  Identities=19%  Similarity=0.241  Sum_probs=61.1

Q ss_pred             CCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      .+..++.++||||||++++|+++ |+.|+.....  ..    .......+...   ..    +......+.+++.+||+.
T Consensus       198 ~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--~~----~~~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~  264 (291)
T cd05094         198 MYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN--TE----VIECITQGRVL---ER----PRVCPKEVYDIMLGCWQR  264 (291)
T ss_pred             ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HH----HHHHHhCCCCC---CC----CccCCHHHHHHHHHHccc
Confidence            34567889999999999999998 8888743211  11    11222223222   11    233334789999999999


Q ss_pred             CCCCCCCHHHHHHHHhcccC
Q 047465           82 SADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~~~~~  101 (139)
                      +|.+||++.++++.|+++..
T Consensus       265 ~P~~Rpt~~~v~~~l~~~~~  284 (291)
T cd05094         265 EPQQRLNIKEIYKILHALGK  284 (291)
T ss_pred             ChhhCcCHHHHHHHHHHHHh
Confidence            99999999999999998866

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.27  E-value=1.6e-11  Score=87.69  Aligned_cols=82  Identities=28%  Similarity=0.188  Sum_probs=57.8

Q ss_pred             CCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +.++.++|+||||++++|+++ |+.|+.....  .....    .+..+...   .+    |......+.+++..||+.+|
T Consensus       173 ~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~----~i~~~~~~---~~----~~~~~~~l~~li~~~~~~~p  239 (257)
T cd05116         173 YKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG--NEVTQ----MIESGERM---EC----PQRCPPEMYDLMKLCWTYGV  239 (257)
T ss_pred             CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHH----HHHCCCCC---CC----CCCCCHHHHHHHHHHhccCc
Confidence            456779999999999999998 8888753221  11111    12222222   21    33333488899999999999


Q ss_pred             CCCCCHHHHHHHHhcc
Q 047465           84 DDRPTVYDVVSMLTNE   99 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~   99 (139)
                      .+||++.+|+..|++-
T Consensus       240 ~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         240 DERPGFAVVELRLRNY  255 (257)
T ss_pred             hhCcCHHHHHHHHhcc
Confidence            9999999999998763

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.25  E-value=2.4e-11  Score=86.69  Aligned_cols=84  Identities=26%  Similarity=0.263  Sum_probs=59.2

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++|+||||+++||+++ |..|+....  .......    .......   .  .  +......+.+++.+||..+
T Consensus       172 ~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~--~~~~~~~----~~~~~~~---~--~--~~~~~~~l~~li~~cl~~~  238 (257)
T cd05060         172 YGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMK--GAEVIAM----LESGERL---P--R--PEECPQEIYSIMLSCWKYR  238 (257)
T ss_pred             CCCCCccchHHHHHHHHHHHHcCCCCCcccCC--HHHHHHH----HHcCCcC---C--C--CCCCCHHHHHHHHHHhcCC
Confidence            4567889999999999999998 888875322  1122221    2222211   1  1  3333347889999999999


Q ss_pred             CCCCCCHHHHHHHHhccc
Q 047465           83 ADDRPTVYDVVSMLTNEA  100 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~  100 (139)
                      |.+||++.++++.|++..
T Consensus       239 p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         239 PEDRPTFSELESTFRRDP  256 (257)
T ss_pred             hhhCcCHHHHHHHHHhcc
Confidence            999999999999998754

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.24  E-value=2.9e-11  Score=86.18  Aligned_cols=81  Identities=27%  Similarity=0.322  Sum_probs=55.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++|+||||+++||+++ |+.|+....  .......    ...+...     ..  |......+..++.+||+.+
T Consensus       175 ~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~--~~~~~~~----i~~~~~~-----~~--~~~~~~~~~~li~~c~~~~  241 (256)
T cd05114         175 FSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS--NYEVVEM----ISRGFRL-----YR--PKLASMTVYEVMYSCWHEK  241 (256)
T ss_pred             cCccchhhhhHHHHHHHHHHHcCCCCCCCCCC--HHHHHHH----HHCCCCC-----CC--CCCCCHHHHHHHHHHccCC
Confidence            3456789999999999999999 777774221  1111111    1122211     11  4444447899999999999


Q ss_pred             CCCCCCHHHHHHHHh
Q 047465           83 ADDRPTVYDVVSMLT   97 (139)
Q Consensus        83 p~~Rps~~~v~~~L~   97 (139)
                      |.+||++.+++..|.
T Consensus       242 p~~Rps~~~l~~~l~  256 (256)
T cd05114         242 PEGRPTFAELLRAIT  256 (256)
T ss_pred             cccCcCHHHHHHhhC
Confidence            999999999998763

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.24  E-value=4.1e-11  Score=87.32  Aligned_cols=88  Identities=17%  Similarity=0.232  Sum_probs=56.0

Q ss_pred             CCCCCccchhhhHhHHHHHHHh--CCCCCCcCCcCchHHHHHHHHHhhc-cchhhhhhhhccCCCCCHHHHHHHHHHhcc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS--GKKNTEFYWTDSLIFVIYYLRVANS-HIFLCLWLIINLRHGIYGRTTGHWTLLCAQ   80 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~   80 (139)
                      ++.++.++|+||||+++||+++  +..|+....  .............. ....   ....  +......+.+++..||+
T Consensus       206 ~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~li~~cl~  278 (296)
T cd05095         206 LGKFTTASDVWAFGVTLWEILTLCKEQPYSQLS--DEQVIENTGEFFRDQGRQV---YLPK--PALCPDSLYKLMLSCWR  278 (296)
T ss_pred             cCCccchhhhhHHHHHHHHHHHhCCCCCccccC--hHHHHHHHHHHHhhccccc---cCCC--CCCCCHHHHHHHHHHcC
Confidence            4567889999999999999998  455553221  11111111111111 1111   1111  33334588999999999


Q ss_pred             cCCCCCCCHHHHHHHHhc
Q 047465           81 ESADDRPTVYDVVSMLTN   98 (139)
Q Consensus        81 ~~p~~Rps~~~v~~~L~~   98 (139)
                      .+|.+||++.++++.|++
T Consensus       279 ~~p~~Rp~~~~i~~~l~~  296 (296)
T cd05095         279 RNAKERPSFQEIHATLLE  296 (296)
T ss_pred             CCcccCCCHHHHHHHHhC
Confidence            999999999999998863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.24  E-value=2.9e-11  Score=87.11  Aligned_cols=83  Identities=19%  Similarity=0.213  Sum_probs=57.5

Q ss_pred             CCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      .++.++.++||||+|++++|+++ |..|+....  ......    ....+...   ..    +......+..++.+||+.
T Consensus       197 ~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~--~~~~~~----~~~~~~~~---~~----~~~~~~~~~~li~~~l~~  263 (280)
T cd05049         197 MYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLS--NEEVIE----CITQGRLL---QR----PRTCPSEVYDIMLGCWKR  263 (280)
T ss_pred             ccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCC--HHHHHH----HHHcCCcC---CC----CCCCCHHHHHHHHHHcCC
Confidence            34567889999999999999998 888874321  111111    11222221   11    222334889999999999


Q ss_pred             CCCCCCCHHHHHHHHhc
Q 047465           82 SADDRPTVYDVVSMLTN   98 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~~   98 (139)
                      +|++||++.+++..|++
T Consensus       264 ~p~~Rp~~~eil~~l~~  280 (280)
T cd05049         264 DPQQRINIKDIHERLQK  280 (280)
T ss_pred             CcccCCCHHHHHHHhhC
Confidence            99999999999998863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.23  E-value=2e-11  Score=90.99  Aligned_cols=86  Identities=23%  Similarity=0.298  Sum_probs=59.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++|||||||+++|+++ |..|+..... ...    ....+..+...   ..    +......+.+++.+||+.+
T Consensus       249 ~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~-~~~----~~~~~~~~~~~---~~----~~~~~~~~~~l~~~cl~~~  316 (337)
T cd05054         249 DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI-DEE----FCRRLKEGTRM---RA----PEYATPEIYSIMLDCWHNN  316 (337)
T ss_pred             CCCCCccccHHHHHHHHHHHHHcCCCCCCCCCc-cHH----HHHHHhccCCC---CC----CccCCHHHHHHHHHHccCC
Confidence            4567889999999999999997 8888753221 111    11112222211   11    2223337899999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |++||++.+++..|+++..
T Consensus       317 p~~RPs~~ell~~l~~~~~  335 (337)
T cd05054         317 PEDRPTFSELVEILGDLLQ  335 (337)
T ss_pred             hhhCcCHHHHHHHHHHHHh
Confidence            9999999999999987654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.23  E-value=3.2e-11  Score=86.40  Aligned_cols=84  Identities=20%  Similarity=0.170  Sum_probs=57.9

Q ss_pred             CCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      .+..++.++||||||++++|+++ |..|++....     .. .......+...   ..    +......+.+++.+||+.
T Consensus       178 ~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-----~~-~~~~~~~~~~~---~~----~~~~~~~~~~li~~cl~~  244 (263)
T cd05052         178 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQ-VYELLEKGYRM---ER----PEGCPPKVYELMRACWQW  244 (263)
T ss_pred             ccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HH-HHHHHHCCCCC---CC----CCCCCHHHHHHHHHHccC
Confidence            34567789999999999999998 8877753211     11 11112222111   11    222334889999999999


Q ss_pred             CCCCCCCHHHHHHHHhcc
Q 047465           82 SADDRPTVYDVVSMLTNE   99 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~~~   99 (139)
                      +|.+||++.++++.|+.+
T Consensus       245 ~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         245 NPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             CcccCCCHHHHHHHHHhh
Confidence            999999999999998764

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.23  E-value=2.8e-11  Score=91.47  Aligned_cols=84  Identities=20%  Similarity=0.273  Sum_probs=58.2

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||+++||+++ |..|+..... ...+..    .+..+...   .  .  |......+.+++..||+.+
T Consensus       290 ~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~-~~~~~~----~~~~~~~~---~--~--~~~~~~~l~~li~~cl~~d  357 (375)
T cd05104         290 NCVYTFESDVWSYGILLWEIFSLGSSPYPGMPV-DSKFYK----MIKEGYRM---L--S--PECAPSEMYDIMKSCWDAD  357 (375)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCc-hHHHHH----HHHhCccC---C--C--CCCCCHHHHHHHHHHccCC
Confidence            4567889999999999999998 7777653221 111111    12222211   1  1  3333447899999999999


Q ss_pred             CCCCCCHHHHHHHHhcc
Q 047465           83 ADDRPTVYDVVSMLTNE   99 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~   99 (139)
                      |.+||++.++++.|++.
T Consensus       358 P~~RPs~~eil~~l~~~  374 (375)
T cd05104         358 PLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             hhHCcCHHHHHHHHHhh
Confidence            99999999999999863

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.23  E-value=2.7e-11  Score=87.06  Aligned_cols=83  Identities=22%  Similarity=0.254  Sum_probs=57.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||+++||+++ |+.|+.....  .   . ....+..+...   .  .  +......+.+++..||+.+
T Consensus       182 ~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~--~---~-~~~~~~~~~~~---~--~--~~~~~~~~~~li~~c~~~~  248 (266)
T cd05064         182 YHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG--Q---D-VIKAVEDGFRL---P--A--PRNCPNLLHQLMLDCWQKE  248 (266)
T ss_pred             hCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH--H---H-HHHHHHCCCCC---C--C--CCCCCHHHHHHHHHHcCCC
Confidence            4567889999999999999775 8888753211  1   1 11222222222   1  1  3333447889999999999


Q ss_pred             CCCCCCHHHHHHHHhcc
Q 047465           83 ADDRPTVYDVVSMLTNE   99 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~   99 (139)
                      |.+||++.++.+.|.+.
T Consensus       249 p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         249 RGERPRFSQIHSILSKM  265 (266)
T ss_pred             chhCCCHHHHHHHHHhh
Confidence            99999999999988764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.22  E-value=3.2e-11  Score=86.42  Aligned_cols=83  Identities=23%  Similarity=0.271  Sum_probs=57.3

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||+++||+++ |+.|+.....  .   ... ..+..+...     ..  +......+.+++.+||+.+
T Consensus       184 ~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~--~---~~~-~~i~~~~~~-----~~--~~~~~~~~~~li~~c~~~~  250 (268)
T cd05063         184 YRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN--H---EVM-KAINDGFRL-----PA--PMDCPSAVYQLMLQCWQQD  250 (268)
T ss_pred             cCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH--H---HHH-HHHhcCCCC-----CC--CCCCCHHHHHHHHHHcCCC
Confidence            3567889999999999999987 8888743211  1   111 112122111     11  2222347889999999999


Q ss_pred             CCCCCCHHHHHHHHhcc
Q 047465           83 ADDRPTVYDVVSMLTNE   99 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~   99 (139)
                      |.+||++.++++.|+++
T Consensus       251 p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         251 RARRPRFVDIVNLLDKL  267 (268)
T ss_pred             cccCcCHHHHHHHHHhh
Confidence            99999999999999764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.22  E-value=2.3e-11  Score=88.75  Aligned_cols=87  Identities=20%  Similarity=0.196  Sum_probs=59.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||||++++||++ |..|+.....     .... .....+...   ..    +......+.+++.+||+.+
T Consensus       192 ~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~-----~~~~-~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~~  258 (297)
T cd05089         192 YSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC-----AELY-EKLPQGYRM---EK----PRNCDDEVYELMRQCWRDR  258 (297)
T ss_pred             cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH-----HHHH-HHHhcCCCC---CC----CCCCCHHHHHHHHHHcCCC
Confidence            3457889999999999999997 8888743211     1111 111112111   11    2223347889999999999


Q ss_pred             CCCCCCHHHHHHHHhcccCCC
Q 047465           83 ADDRPTVYDVVSMLTNEATTL  103 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~~~  103 (139)
                      |.+||++.+++..|+......
T Consensus       259 p~~Rp~~~~i~~~l~~~~~~~  279 (297)
T cd05089         259 PYERPPFAQISVQLSRMLEAR  279 (297)
T ss_pred             hhhCcCHHHHHHHHHHHHHhh
Confidence            999999999999988776644

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.22  E-value=1.2e-11  Score=96.42  Aligned_cols=89  Identities=17%  Similarity=0.251  Sum_probs=63.8

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccch-hhhhhhhccCCC-CCHHHHHHHHHHhcccC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIF-LCLWLIINLRHG-IYGRTTGHWTLLCAQES   82 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~p~-~~~~~~~~l~~~C~~~~   82 (139)
                      ..|+..+||||||+|+|||++|..|+..... ...    ++ ....|.. +   +...  .. .+...+.+|+..||..+
T Consensus       568 nPfS~qSDVYaFGiV~YELltg~lPysi~~~-dqI----if-mVGrG~l~p---d~s~--~~s~~pk~mk~Ll~~C~~~~  636 (678)
T KOG0193|consen  568 NPFSFQSDVYAFGIVWYELLTGELPYSIQNR-DQI----IF-MVGRGYLMP---DLSK--IRSNCPKAMKRLLSDCWKFD  636 (678)
T ss_pred             CCCCcccchhhhhHHHHHHHhCcCCcCCCCh-hhe----EE-EecccccCc---cchh--hhccCHHHHHHHHHHHHhcC
Confidence            3689999999999999999999999862222 111    11 1223322 2   3333  32 33348999999999999


Q ss_pred             CCCCCCHHHHHHHHhcccCCCC
Q 047465           83 ADDRPTVYDVVSMLTNEATTLN  104 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~~~~  104 (139)
                      +++||.|.+++..|+.+...++
T Consensus       637 ~~eRP~F~~il~~l~~l~~~~p  658 (678)
T KOG0193|consen  637 REERPLFPQLLSKLEELLPSLP  658 (678)
T ss_pred             cccCccHHHHHHHHHHhhhccc
Confidence            9999999999999888777543

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.22  E-value=3.8e-11  Score=85.43  Aligned_cols=81  Identities=26%  Similarity=0.325  Sum_probs=56.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||+|+++||+++ |+.|+.....  .   ... .....+..     ...  +......+.+++..||+.+
T Consensus       175 ~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--~---~~~-~~~~~~~~-----~~~--~~~~~~~~~~l~~~~l~~~  241 (256)
T cd05112         175 FSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN--S---EVV-ETINAGFR-----LYK--PRLASQSVYELMQHCWKER  241 (256)
T ss_pred             cCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH--H---HHH-HHHhCCCC-----CCC--CCCCCHHHHHHHHHHcccC
Confidence            4567789999999999999998 7877743211  1   111 11222211     111  4445558999999999999


Q ss_pred             CCCCCCHHHHHHHHh
Q 047465           83 ADDRPTVYDVVSMLT   97 (139)
Q Consensus        83 p~~Rps~~~v~~~L~   97 (139)
                      |++||++.++++.|.
T Consensus       242 p~~Rp~~~~~l~~l~  256 (256)
T cd05112         242 PEDRPSFSLLLHQLA  256 (256)
T ss_pred             hhhCCCHHHHHHhhC
Confidence            999999999998874

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.22  E-value=4.1e-11  Score=85.86  Aligned_cols=83  Identities=23%  Similarity=0.212  Sum_probs=57.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||||++++|+++ |..|+....  .......    ...+...   ..    +......+.+++.+||+.+
T Consensus       189 ~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~--~~~~~~~----~~~~~~~---~~----~~~~~~~~~~li~~~l~~~  255 (273)
T cd05035         189 DRVYTSKSDVWAFGVTMWEIATRGQTPYPGVE--NHEIYDY----LRHGNRL---KQ----PEDCLDELYDLMYSCWRAD  255 (273)
T ss_pred             cCCCCcccchHHHHHHHHHHHhCCCCCCCCCC--HHHHHHH----HHcCCCC---CC----CcCCCHHHHHHHHHHcCCC
Confidence            3457889999999999999999 777764322  1111111    1122221   11    2223338899999999999


Q ss_pred             CCCCCCHHHHHHHHhcc
Q 047465           83 ADDRPTVYDVVSMLTNE   99 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~   99 (139)
                      |.+||++.+++..|+++
T Consensus       256 p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         256 PKDRPTFTKLREVLENI  272 (273)
T ss_pred             hhhCcCHHHHHHHHHhh
Confidence            99999999999998864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.22  E-value=1.6e-11  Score=95.07  Aligned_cols=78  Identities=15%  Similarity=0.197  Sum_probs=54.3

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHH-HHHHHHHHhcccCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGR-TTGHWTLLCAQESAD   84 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~-~~~~l~~~C~~~~p~   84 (139)
                      +.+.++||||+||++|+|+.|+.||..+    .............+...   +.    |.+... .+.++|..|++.||+
T Consensus       548 Ki~r~SDvWSLGCILYqMvYgktPf~~~----~n~~aKl~aI~~P~~~I---ef----p~~~~~~~li~~mK~CL~rdPk  616 (677)
T KOG0596|consen  548 KISRKSDVWSLGCILYQMVYGKTPFGQI----INQIAKLHAITDPNHEI---EF----PDIPENDELIDVMKCCLARDPK  616 (677)
T ss_pred             eecCccchhhhhhHHHHHHhcCCchHHH----HHHHHHHHhhcCCCccc---cc----cCCCCchHHHHHHHHHHhcCcc
Confidence            4688999999999999999999998532    12222222222222322   11    222222 589999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.++++
T Consensus       617 kR~si~eLLq  626 (677)
T KOG0596|consen  617 KRWSIPELLQ  626 (677)
T ss_pred             cCCCcHHHhc
Confidence            9999999875

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.22  E-value=5.8e-11  Score=86.87  Aligned_cols=87  Identities=18%  Similarity=0.189  Sum_probs=55.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCC--CCCCcCCcCchHHHHHHHHHhhcc-chhhhhhhhccCCCCCHHHHHHHHHHhcc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGK--KNTEFYWTDSLIFVIYYLRVANSH-IFLCLWLIINLRHGIYGRTTGHWTLLCAQ   80 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~p~~~~~~~~~l~~~C~~   80 (139)
                      ++.++.++||||||+++||++++.  .|+....  .......+....... ...   ....  +...+..+.+++.+||+
T Consensus       214 ~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~li~~cl~  286 (304)
T cd05096         214 MGKFTTASDVWAFGVTLWEILMLCKEQPYGELT--DEQVIENAGEFFRDQGRQV---YLFR--PPPCPQGLYELMLQCWS  286 (304)
T ss_pred             cCCCCchhhhHHHHHHHHHHHHccCCCCCCcCC--HHHHHHHHHHHhhhccccc---cccC--CCCCCHHHHHHHHHHcc
Confidence            456788999999999999998754  4443211  122222222211111 111   1111  33344588999999999


Q ss_pred             cCCCCCCCHHHHHHHHh
Q 047465           81 ESADDRPTVYDVVSMLT   97 (139)
Q Consensus        81 ~~p~~Rps~~~v~~~L~   97 (139)
                      .+|.+||++.++++.|+
T Consensus       287 ~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         287 RDCRERPSFSDIHAFLT  303 (304)
T ss_pred             CCchhCcCHHHHHHHHh
Confidence            99999999999998876

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.21  E-value=3.6e-11  Score=90.89  Aligned_cols=84  Identities=18%  Similarity=0.337  Sum_probs=58.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||+++||+++ |+.||...... ..    .......+...   .  .  +......+.+++.+||+.+
T Consensus       288 ~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~-~~----~~~~~~~~~~~---~--~--~~~~~~~l~~li~~cl~~d  355 (374)
T cd05106         288 DCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN-SK----FYKMVKRGYQM---S--R--PDFAPPEIYSIMKMCWNLE  355 (374)
T ss_pred             CCCCCccccHHHHHHHHHHHHhCCCCCCcccccc-HH----HHHHHHcccCc---c--C--CCCCCHHHHHHHHHHcCCC
Confidence            4567889999999999999997 88888543221 11    11111112111   1  1  2222348899999999999


Q ss_pred             CCCCCCHHHHHHHHhcc
Q 047465           83 ADDRPTVYDVVSMLTNE   99 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~   99 (139)
                      |.+||++.++++.|+++
T Consensus       356 p~~RPs~~~l~~~l~~~  372 (374)
T cd05106         356 PTERPTFSQISQLIQRQ  372 (374)
T ss_pred             hhhCcCHHHHHHHHHHH
Confidence            99999999999999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.21  E-value=3.6e-11  Score=87.32  Aligned_cols=85  Identities=24%  Similarity=0.249  Sum_probs=59.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++|+||||++++||++ |..|+.....  ....    .....+...   ..    +......+.+++.+||+.+
T Consensus       196 ~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~--~~~~----~~i~~~~~~---~~----~~~~~~~l~~li~~~l~~~  262 (288)
T cd05093         196 YRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--NEVI----ECITQGRVL---QR----PRTCPKEVYDLMLGCWQRE  262 (288)
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHH----HHHHcCCcC---CC----CCCCCHHHHHHHHHHccCC
Confidence            4567889999999999999998 7777643211  1111    112222222   11    2333348899999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.+++..|+++..
T Consensus       263 p~~Rpt~~~v~~~l~~~~~  281 (288)
T cd05093         263 PHMRLNIKEIHSLLQNLAK  281 (288)
T ss_pred             hhhCCCHHHHHHHHHHHHH
Confidence            9999999999999988765

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.21  E-value=6e-11  Score=84.87  Aligned_cols=87  Identities=18%  Similarity=0.210  Sum_probs=58.0

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++|+||+|+++||+++|+.|+....   ....... ........+   ...   +......+.+++.+||+.+|
T Consensus       180 ~~~~~~~~Di~slG~~l~el~~g~~p~~~~~---~~~~~~~-~~~~~~~~~---~~~---~~~~~~~~~~li~~cl~~~p  249 (267)
T cd08228         180 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLFSLC-QKIEQCDYP---PLP---TEHYSEKLRELVSMCIYPDP  249 (267)
T ss_pred             cCCCCchhhHHHHHHHHHHHhcCCCCCcccc---ccHHHHH-HHHhcCCCC---CCC---hhhcCHHHHHHHHHHCCCCc
Confidence            3456788999999999999999999874221   1111111 112222222   111   01112278899999999999


Q ss_pred             CCCCCHHHHHHHHhccc
Q 047465           84 DDRPTVYDVVSMLTNEA  100 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~  100 (139)
                      .+||++.++++.++++.
T Consensus       250 ~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         250 DQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             ccCcCHHHHHHHHHHhc
Confidence            99999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.21  E-value=4.2e-11  Score=86.42  Aligned_cols=82  Identities=22%  Similarity=0.231  Sum_probs=55.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||++++|+++ |+.||....  ......    ........   ..    |......+.+++.+||+.+
T Consensus       195 ~~~~~~~~DiwslG~il~el~~~g~~pf~~~~--~~~~~~----~~~~~~~~---~~----~~~~~~~~~~~i~~cl~~~  261 (277)
T cd05036         195 DGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRT--NQEVME----FVTGGGRL---DP----PKGCPGPVYRIMTDCWQHT  261 (277)
T ss_pred             cCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHH----HHHcCCcC---CC----CCCCCHHHHHHHHHHcCCC
Confidence            4568899999999999999997 887775321  111111    11111111   11    2222347889999999999


Q ss_pred             CCCCCCHHHHHHHHhc
Q 047465           83 ADDRPTVYDVVSMLTN   98 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~   98 (139)
                      |++||++.++++.|+.
T Consensus       262 p~~Rps~~~vl~~l~~  277 (277)
T cd05036         262 PEDRPNFATILERIQY  277 (277)
T ss_pred             cccCcCHHHHHHHhhC
Confidence            9999999999998863

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.21  E-value=4.5e-11  Score=85.43  Aligned_cols=81  Identities=28%  Similarity=0.340  Sum_probs=56.0

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||+++||+++ |..|+.....  .....    ....+...   ..    +......+.+++..||+.+
T Consensus       175 ~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~--~~~~~----~~~~~~~~---~~----~~~~~~~~~~li~~cl~~~  241 (256)
T cd05113         175 YSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN--SETVE----KVSQGLRL---YR----PHLASEKVYAIMYSCWHEK  241 (256)
T ss_pred             cCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH--HHHHH----HHhcCCCC---CC----CCCCCHHHHHHHHHHcCCC
Confidence            3567889999999999999998 8888753221  11111    11222221   11    3333458899999999999


Q ss_pred             CCCCCCHHHHHHHHh
Q 047465           83 ADDRPTVYDVVSMLT   97 (139)
Q Consensus        83 p~~Rps~~~v~~~L~   97 (139)
                      |.+||++.+++..|+
T Consensus       242 p~~Rp~~~~ll~~~~  256 (256)
T cd05113         242 AEERPTFQQLLSSIE  256 (256)
T ss_pred             cccCCCHHHHHHhhC
Confidence            999999999998764

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.20  E-value=3.4e-11  Score=97.00  Aligned_cols=87  Identities=18%  Similarity=0.174  Sum_probs=66.3

Q ss_pred             CCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      +...|+.++|||+|||.+||++| |.+|++....      .-+...++.+.     .+.+  |.++.-+++-+|..||..
T Consensus       873 ~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~------~eI~dlle~ge-----RLsq--PpiCtiDVy~~mvkCwmi  939 (1177)
T KOG1025|consen  873 RIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA------EEIPDLLEKGE-----RLSQ--PPICTIDVYMVMVKCWMI  939 (1177)
T ss_pred             hccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH------HHhhHHHhccc-----cCCC--CCCccHHHHHHHHHHhcc
Confidence            56789999999999999999999 7888753322      12333344444     3334  777777999999999999


Q ss_pred             CCCCCCCHHHHHHHHhcccCC
Q 047465           82 SADDRPTVYDVVSMLTNEATT  102 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~~~~~~  102 (139)
                      |++.||.|+++...+......
T Consensus       940 d~~~rp~fkel~~~fs~~ard  960 (1177)
T KOG1025|consen  940 DADSRPTFKELAEEFSRMARD  960 (1177)
T ss_pred             CcccCccHHHHHHHHHHHhcC
Confidence            999999999999887765553

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.20  E-value=2.4e-11  Score=87.88  Aligned_cols=94  Identities=18%  Similarity=0.168  Sum_probs=57.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhc--cC---CCCCHHHHHHHHHHh
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIIN--LR---HGIYGRTTGHWTLLC   78 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~~---p~~~~~~~~~l~~~C   78 (139)
                      .+.++.++||||||++++|+++|+.|+........................   ...+  .+   +......+..++..|
T Consensus       184 ~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~li~~c  260 (283)
T cd05080         184 ENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLI---ELLERGMRLPCPKNCPQEVYILMKNC  260 (283)
T ss_pred             ccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhh---hhhhcCCCCCCCCCCCHHHHHHHHHH
Confidence            355788999999999999999999887432211000000000000000000   0000  00   222234889999999


Q ss_pred             cccCCCCCCCHHHHHHHHhccc
Q 047465           79 AQESADDRPTVYDVVSMLTNEA  100 (139)
Q Consensus        79 ~~~~p~~Rps~~~v~~~L~~~~  100 (139)
                      |+.+|.+||++.+++..|+.+.
T Consensus       261 l~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         261 WETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             hccChhhCCCHHHHHHHHHHhh
Confidence            9999999999999999998754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.20  E-value=5.8e-11  Score=85.19  Aligned_cols=83  Identities=20%  Similarity=0.135  Sum_probs=56.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||||+++||+++ |+.|+....  .....    .....+...   ..    +......+.+++..||+.+
T Consensus       188 ~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--~~~~~----~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~~  254 (272)
T cd05075         188 DRVYTTKSDVWSFGVTMWEIATRGQTPYPGVE--NSEIY----DYLRQGNRL---KQ----PPDCLDGLYSLMSSCWLLN  254 (272)
T ss_pred             CCCcChHHHHHHHHHHHHHHHcCCCCCCCCCC--HHHHH----HHHHcCCCC---CC----CCCCCHHHHHHHHHHcCCC
Confidence            3457889999999999999998 677775321  11111    112222211   11    2222337889999999999


Q ss_pred             CCCCCCHHHHHHHHhcc
Q 047465           83 ADDRPTVYDVVSMLTNE   99 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~   99 (139)
                      |++||++.+++..|+++
T Consensus       255 p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         255 PKDRPSFETLRCELEKA  271 (272)
T ss_pred             cccCcCHHHHHHHHHhh
Confidence            99999999999998864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.20  E-value=5.1e-11  Score=86.11  Aligned_cols=82  Identities=28%  Similarity=0.281  Sum_probs=56.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||+|+++||+++ |..|+....  ....   . ..+..+...   .+    +...+..+..++..||+.+
T Consensus       200 ~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~--~~~~---~-~~i~~~~~~---~~----~~~~~~~~~~li~~cl~~~  266 (283)
T cd05091         200 YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS--NQDV---I-EMIRNRQVL---PC----PDDCPAWVYTLMLECWNEF  266 (283)
T ss_pred             cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCC--HHHH---H-HHHHcCCcC---CC----CCCCCHHHHHHHHHHhCCC
Confidence            4567889999999999999998 666664221  1111   1 112222221   11    2223347889999999999


Q ss_pred             CCCCCCHHHHHHHHhc
Q 047465           83 ADDRPTVYDVVSMLTN   98 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~   98 (139)
                      |.+||++.+++..|++
T Consensus       267 p~~RP~~~~i~~~l~~  282 (283)
T cd05091         267 PSRRPRFKDIHSRLRT  282 (283)
T ss_pred             cccCCCHHHHHHHhhC
Confidence            9999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.20  E-value=4.7e-11  Score=86.70  Aligned_cols=85  Identities=20%  Similarity=0.286  Sum_probs=59.2

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||||++++|+++ |+.|++....  ..+.    .........   ..    +......+.+++..||+.+
T Consensus       203 ~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~----~~~~~~~~~---~~----~~~~~~~~~~~i~~cl~~~  269 (290)
T cd05045         203 DHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP--ERLF----NLLKTGYRM---ER----PENCSEEMYNLMLTCWKQE  269 (290)
T ss_pred             cCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH--HHHH----HHHhCCCCC---CC----CCCCCHHHHHHHHHHccCC
Confidence            3457889999999999999998 8887753221  1111    122222111   11    3333348889999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.+++..|+++..
T Consensus       270 P~~Rp~~~~i~~~l~~~~~  288 (290)
T cd05045         270 PDKRPTFADISKELEKMMV  288 (290)
T ss_pred             cccCCCHHHHHHHHHHHHh
Confidence            9999999999999988654

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.19  E-value=6.6e-11  Score=85.62  Aligned_cols=83  Identities=23%  Similarity=0.185  Sum_probs=56.3

Q ss_pred             CCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      .+..++.++||||||++++|+++ |..|+....  .......    ...+...   .  .  +......+.+++.+||+.
T Consensus       197 ~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--~~~~~~~----~~~~~~~---~--~--~~~~~~~~~~li~~cl~~  263 (280)
T cd05092         197 LYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLS--NTEAIEC----ITQGREL---E--R--PRTCPPEVYAIMQGCWQR  263 (280)
T ss_pred             ccCCcCchhhHHHHHHHHHHHHcCCCCCCccCC--HHHHHHH----HHcCccC---C--C--CCCCCHHHHHHHHHHccC
Confidence            34567889999999999999998 777764221  1111111    1111111   1  1  333334788999999999


Q ss_pred             CCCCCCCHHHHHHHHhc
Q 047465           82 SADDRPTVYDVVSMLTN   98 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~~   98 (139)
                      +|.+||++.++...|+.
T Consensus       264 ~P~~Rp~~~~l~~~l~~  280 (280)
T cd05092         264 EPQQRMVIKDIHSRLQA  280 (280)
T ss_pred             ChhhCCCHHHHHHHHhC
Confidence            99999999999998863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.19  E-value=5.1e-11  Score=85.25  Aligned_cols=83  Identities=20%  Similarity=0.123  Sum_probs=57.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||+++||+++ |..|+....  ...    +......+...   ..    +......+.+++..||..+
T Consensus       172 ~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~----~~~~~~~~~~~---~~----~~~~~~~l~~li~~c~~~~  238 (257)
T cd05115         172 FRKFSSRSDVWSYGITMWEAFSYGQKPYKKMK--GPE----VMSFIEQGKRL---DC----PAECPPEMYALMKDCWIYK  238 (257)
T ss_pred             cCCCCchhhHHHHHHHHHHHhcCCCCCcCcCC--HHH----HHHHHHCCCCC---CC----CCCCCHHHHHHHHHHcCCC
Confidence            3457789999999999999996 888875321  111    11222222222   11    2333348889999999999


Q ss_pred             CCCCCCHHHHHHHHhcc
Q 047465           83 ADDRPTVYDVVSMLTNE   99 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~   99 (139)
                      |++||++.++.+.|+..
T Consensus       239 ~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         239 WEDRPNFAKVEERMRTY  255 (257)
T ss_pred             hhhCcCHHHHHHHHhhh
Confidence            99999999999988764

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.19  E-value=8.7e-11  Score=83.96  Aligned_cols=83  Identities=27%  Similarity=0.298  Sum_probs=56.9

Q ss_pred             CCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      .+..++.++|+||||++++|+++ |+.|+.....  ....    ..+......   ..    +......+.+++.+|++.
T Consensus       177 ~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~----~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~  243 (261)
T cd05068         177 LYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN--AEVL----QQVDQGYRM---PC----PPGCPKELYDIMLDCWKE  243 (261)
T ss_pred             ccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH--HHHH----HHHHcCCCC---CC----CCcCCHHHHHHHHHHhhc
Confidence            34567889999999999999999 8877753211  1111    111111111   11    222233788999999999


Q ss_pred             CCCCCCCHHHHHHHHhc
Q 047465           82 SADDRPTVYDVVSMLTN   98 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~~   98 (139)
                      +|.+||++.++...|+.
T Consensus       244 ~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         244 DPDDRPTFETLQWKLED  260 (261)
T ss_pred             CcccCCCHHHHHHHHhc
Confidence            99999999999999875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.19  E-value=9.8e-11  Score=85.30  Aligned_cols=88  Identities=15%  Similarity=0.211  Sum_probs=55.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHhC--CCCCCcCCcCchHHHHHHHHHhhc-cchhhhhhhhccCCCCCHHHHHHHHHHhcc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSG--KKNTEFYWTDSLIFVIYYLRVANS-HIFLCLWLIINLRHGIYGRTTGHWTLLCAQ   80 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~   80 (139)
                      ++.++.++|+||||++++|++++  ..|+....  .......+...... +...   ....  +...+..+.+++.+||+
T Consensus       205 ~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~l~~li~~~l~  277 (295)
T cd05097         205 LGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS--DEQVIENTGEFFRNQGRQI---YLSQ--TPLCPSPVFKLMMRCWS  277 (295)
T ss_pred             cCCcCchhhHHHHHHHHHHHHHcCCCCCCcccC--hHHHHHHHHHhhhhccccc---cCCC--CCCCCHHHHHHHHHHcC
Confidence            45678899999999999999984  44443211  11222211111111 1111   1111  23333488999999999


Q ss_pred             cCCCCCCCHHHHHHHHhc
Q 047465           81 ESADDRPTVYDVVSMLTN   98 (139)
Q Consensus        81 ~~p~~Rps~~~v~~~L~~   98 (139)
                      .+|++||++.++++.|+.
T Consensus       278 ~~p~~RPs~~~i~~~l~~  295 (295)
T cd05097         278 RDIKDRPTFNKIHHFLRE  295 (295)
T ss_pred             CCchhCcCHHHHHHHHhC
Confidence            999999999999998863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.19  E-value=7.2e-11  Score=84.59  Aligned_cols=83  Identities=23%  Similarity=0.264  Sum_probs=57.3

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||||++++|+++ |..|+....  .....    .....+...   +  .  +......+.+++.+||+.+
T Consensus       182 ~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~--~~~~~----~~~~~~~~~---~--~--~~~~~~~l~~li~~cl~~~  248 (266)
T cd05033         182 YRKFTSASDVWSFGIVMWEVMSYGERPYWDMS--NQDVI----KAVEDGYRL---P--P--PMDCPSALYQLMLDCWQKD  248 (266)
T ss_pred             cCCCccccchHHHHHHHHHHHccCCCCCCCCC--HHHHH----HHHHcCCCC---C--C--CCCCCHHHHHHHHHHcCCC
Confidence            4567889999999999999997 887774221  11111    112122111   1  1  2223347889999999999


Q ss_pred             CCCCCCHHHHHHHHhcc
Q 047465           83 ADDRPTVYDVVSMLTNE   99 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~   99 (139)
                      |++||++.++++.|+++
T Consensus       249 p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         249 RNERPTFSQIVSTLDKM  265 (266)
T ss_pred             cccCcCHHHHHHHHHhh
Confidence            99999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.19  E-value=4.4e-11  Score=86.81  Aligned_cols=84  Identities=21%  Similarity=0.238  Sum_probs=58.0

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||||+++||+++ |..|+.....  ..    .......+...   ..    +......+.+++..||..+
T Consensus       208 ~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~----~~~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~~  274 (293)
T cd05053         208 DRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV--EE----LFKLLKEGYRM---EK----PQNCTQELYHLMRDCWHEV  274 (293)
T ss_pred             cCCcCcccceeehhhHHHHHhcCCCCCCCCCCH--HH----HHHHHHcCCcC---CC----CCCCCHHHHHHHHHHcccC
Confidence            4457889999999999999997 7777643211  11    11222222221   11    2222347889999999999


Q ss_pred             CCCCCCHHHHHHHHhccc
Q 047465           83 ADDRPTVYDVVSMLTNEA  100 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~  100 (139)
                      |.+||++.+++..|+++.
T Consensus       275 p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         275 PSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             cccCcCHHHHHHHHHHhh
Confidence            999999999999998754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.19  E-value=1.1e-10  Score=85.33  Aligned_cols=84  Identities=11%  Similarity=0.060  Sum_probs=56.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHH----HHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYY----LRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCA   79 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~   79 (139)
                      +..++.++||||||++++|+++|+.||...... .......    ...+..+..       .  ....+..+.+++..||
T Consensus       207 ~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~-~~~~~~~~~~~~~~~~~~~~-------~--~~~~~~~~~~~~~~~~  276 (294)
T PHA02882        207 GACVTRRGDLESLGYCMLKWAGIKLPWKGFGHN-GNLIHAAKCDFIKRLHEGKI-------K--IKNANKFIYDFIECVT  276 (294)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCccccc-hHHHHHhHHHHHHHhhhhhh-------c--cCCCCHHHHHHHHHHH
Confidence            456789999999999999999999998644221 1111111    111111111       1  2222347889999999


Q ss_pred             ccCCCCCCCHHHHHHHHh
Q 047465           80 QESADDRPTVYDVVSMLT   97 (139)
Q Consensus        80 ~~~p~~Rps~~~v~~~L~   97 (139)
                      ..+|.+||++.++.+.|+
T Consensus       277 ~~~~~~rp~~~~l~~~~~  294 (294)
T PHA02882        277 KLSYEEKPDYDALIKIFD  294 (294)
T ss_pred             hCCCCCCCCHHHHHHhhC
Confidence            999999999999988763

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.19  E-value=5e-11  Score=87.77  Aligned_cols=85  Identities=19%  Similarity=0.222  Sum_probs=59.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||||+++||+++ |+.|+.....  ..+    ......+...     ..  +......+..++..||+.+
T Consensus       185 ~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~--~~~----~~~~~~~~~~-----~~--~~~~~~~~~~li~~cl~~~  251 (316)
T cd05108         185 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEI----SSILEKGERL-----PQ--PPICTIDVYMIMVKCWMID  251 (316)
T ss_pred             cCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--HHH----HHHHhCCCCC-----CC--CCCCCHHHHHHHHHHccCC
Confidence            4567889999999999999997 8888753211  111    1112222211     11  3333447889999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.+++..+.....
T Consensus       252 p~~Rps~~~l~~~l~~~~~  270 (316)
T cd05108         252 ADSRPKFRELIIEFSKMAR  270 (316)
T ss_pred             hhhCcCHHHHHHHHHHHHc
Confidence            9999999999999887655

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.19  E-value=7.5e-11  Score=84.19  Aligned_cols=84  Identities=23%  Similarity=0.190  Sum_probs=56.0

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCC-CCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKK-NTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||||+++||++++.. ++....  .   ...... ...+...   .  .  +......+.+++..||+.+
T Consensus       176 ~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~--~---~~~~~~-~~~~~~~---~--~--~~~~~~~~~~li~~cl~~~  242 (262)
T cd05058         176 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD--S---FDITVY-LLQGRRL---L--Q--PEYCPDPLYEVMLSCWHPK  242 (262)
T ss_pred             cCccchHHHHHHHHHHHHHHHcCCCCCCCCCC--H---HHHHHH-HhcCCCC---C--C--CCcCCHHHHHHHHHHcCCC
Confidence            4567889999999999999999654 443211  1   111111 1111111   1  1  2222337889999999999


Q ss_pred             CCCCCCHHHHHHHHhccc
Q 047465           83 ADDRPTVYDVVSMLTNEA  100 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~  100 (139)
                      |.+||++.+++..|++..
T Consensus       243 p~~Rp~~~~il~~l~~~~  260 (262)
T cd05058         243 PEMRPTFSELVSRIEQIF  260 (262)
T ss_pred             hhhCCCHHHHHHHHHHHh
Confidence            999999999999998764

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.19  E-value=1.1e-10  Score=83.56  Aligned_cols=83  Identities=25%  Similarity=0.318  Sum_probs=56.6

Q ss_pred             CCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      .++.++.++||||||++++|+++ |+.|+....  ......    ....+...   ..    +...+..+.+++.+||..
T Consensus       186 ~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~--~~~~~~----~~~~~~~~---~~----~~~~~~~~~~li~~~l~~  252 (269)
T cd05044         186 LDGKFTTQSDVWSFGVLMWEILTLGQQPYPALN--NQEVLQ----HVTAGGRL---QK----PENCPDKIYQLMTNCWAQ  252 (269)
T ss_pred             ccCCcccchhHHHHHHHHHHHHHcCCCCCcccC--HHHHHH----HHhcCCcc---CC----cccchHHHHHHHHHHcCC
Confidence            34567889999999999999998 888875321  111111    11111111   11    222334788999999999


Q ss_pred             CCCCCCCHHHHHHHHhc
Q 047465           82 SADDRPTVYDVVSMLTN   98 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~~   98 (139)
                      +|.+||++.+++..|++
T Consensus       253 ~p~~Rp~~~~i~~~l~~  269 (269)
T cd05044         253 DPSERPTFDRIQEILQN  269 (269)
T ss_pred             CcccCCCHHHHHHHHhC
Confidence            99999999999998863

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.19  E-value=2.9e-11  Score=94.30  Aligned_cols=92  Identities=17%  Similarity=0.211  Sum_probs=65.5

Q ss_pred             CCCCCCccchhhhHhHHHHHHHh--CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILS--GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQ   80 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~   80 (139)
                      .-|+|+.++|||+||+.+||+++  ..+|+...-  ....++........+...   .++ .||++++..++++++.||.
T Consensus       712 llgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt--~e~vven~~~~~~~~~~~---~~l-~~P~~cp~~lyelml~Cw~  785 (807)
T KOG1094|consen  712 LLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLT--DEQVVENAGEFFRDQGRQ---VVL-SRPPACPQGLYELMLRCWR  785 (807)
T ss_pred             HhccccchhhhhhhHHHHHHHHHHHhhCchhhhh--HHHHHHhhhhhcCCCCcc---eec-cCCCcCcHHHHHHHHHHhc
Confidence            45789999999999999999976  566764321  112222222223222221   111 4488988899999999999


Q ss_pred             cCCCCCCCHHHHHHHHhccc
Q 047465           81 ESADDRPTVYDVVSMLTNEA  100 (139)
Q Consensus        81 ~~p~~Rps~~~v~~~L~~~~  100 (139)
                      .+..+||+|++++..|+...
T Consensus       786 ~es~~RPsFe~lh~~lq~~~  805 (807)
T KOG1094|consen  786 RESEQRPSFEQLHLFLQEDA  805 (807)
T ss_pred             hhhhcCCCHHHHHHHHHHhc
Confidence            99999999999999887643

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.18  E-value=8.7e-11  Score=83.78  Aligned_cols=83  Identities=22%  Similarity=0.252  Sum_probs=57.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++|+|+||++++++++ |+.|+....  .......    ...+...   .  .  +......+.+++.+||+.+
T Consensus       178 ~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~--~~~~~~~----~~~~~~~---~--~--~~~~~~~~~~~i~~~l~~~  244 (261)
T cd05148         178 HGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN--NHEVYDQ----ITAGYRM---P--C--PAKCPQEIYKIMLECWAAE  244 (261)
T ss_pred             cCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC--HHHHHHH----HHhCCcC---C--C--CCCCCHHHHHHHHHHcCCC
Confidence            3457789999999999999998 777774321  1111111    1112111   1  1  3333347889999999999


Q ss_pred             CCCCCCHHHHHHHHhcc
Q 047465           83 ADDRPTVYDVVSMLTNE   99 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~   99 (139)
                      |.+||++.++++.|+++
T Consensus       245 p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         245 PEDRPSFKALREELDNI  261 (261)
T ss_pred             chhCcCHHHHHHHHhcC
Confidence            99999999999999863

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.18  E-value=8.6e-11  Score=83.91  Aligned_cols=82  Identities=26%  Similarity=0.282  Sum_probs=56.3

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++|+||||++++++++ |+.|+.....  ....    ..+..+...   +.    +......+.+++.+||..+
T Consensus       178 ~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~--~~~~----~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~~  244 (261)
T cd05072         178 FGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN--SDVM----SALQRGYRM---PR----MENCPDELYDIMKTCWKEK  244 (261)
T ss_pred             cCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH--HHHH----HHHHcCCCC---CC----CCCCCHHHHHHHHHHccCC
Confidence            4557789999999999999998 8888753211  1111    111112111   11    1122337889999999999


Q ss_pred             CCCCCCHHHHHHHHhc
Q 047465           83 ADDRPTVYDVVSMLTN   98 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~   98 (139)
                      |++||++.++...|++
T Consensus       245 p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         245 AEERPTFDYLQSVLDD  260 (261)
T ss_pred             cccCcCHHHHHHHHhc
Confidence            9999999999999876

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.18  E-value=6.3e-11  Score=85.22  Aligned_cols=84  Identities=21%  Similarity=0.202  Sum_probs=57.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++|+||||++++|+++ |..||....  .   .... .....+...   +.    +......+.+++.+||..+
T Consensus       185 ~~~~~~~~Di~slG~il~el~~~g~~pf~~~~--~---~~~~-~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~~  251 (270)
T cd05047         185 YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT--C---AELY-EKLPQGYRL---EK----PLNCDDEVYDLMRQCWREK  251 (270)
T ss_pred             cCCCCchhhHHHHHHHHHHHHcCCCCCccccC--H---HHHH-HHHhCCCCC---CC----CCcCCHHHHHHHHHHcccC
Confidence            4457889999999999999997 888874211  1   1111 111112111   11    2222337889999999999


Q ss_pred             CCCCCCHHHHHHHHhccc
Q 047465           83 ADDRPTVYDVVSMLTNEA  100 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~  100 (139)
                      |.+||++.+++..|.++.
T Consensus       252 p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         252 PYERPSFAQILVSLNRML  269 (270)
T ss_pred             hhhCCCHHHHHHHHHHhh
Confidence            999999999999998753

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.18  E-value=9.3e-11  Score=83.73  Aligned_cols=87  Identities=17%  Similarity=0.214  Sum_probs=58.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++|+||||+++|++++|+.|+....   ....... .....+...   ....  + .....+.+++.+||..+|
T Consensus       180 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~-~~~~~~~~~---~~~~--~-~~~~~~~~~i~~cl~~~p  249 (267)
T cd08224         180 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSLC-KKIEKCDYP---PLPA--D-HYSEELRDLVSRCINPDP  249 (267)
T ss_pred             cCCCCchhcHHHHHHHHHHHHHCCCCcccCC---ccHHHHH-hhhhcCCCC---CCCh--h-hcCHHHHHHHHHHcCCCc
Confidence            4457789999999999999999998874221   1111111 111122222   1111  1 122278889999999999


Q ss_pred             CCCCCHHHHHHHHhccc
Q 047465           84 DDRPTVYDVVSMLTNEA  100 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~  100 (139)
                      .+||++.+++..|+.++
T Consensus       250 ~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         250 EKRPDISYVLQVAKEMH  266 (267)
T ss_pred             ccCCCHHHHHHHHHHhc
Confidence            99999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.18  E-value=9.6e-11  Score=84.00  Aligned_cols=82  Identities=13%  Similarity=0.297  Sum_probs=55.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ++.++.++|+||||+++||+++|+.|+....     ....... ...+...   ...   .......+.+++.+||+.+|
T Consensus       187 ~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~-----~~~~~~~-~~~~~~~---~~~---~~~~~~~l~~li~~cl~~~p  254 (269)
T cd08528         187 NEPYGEKADVWAFGCILYQMCTLQPPFYSTN-----MLSLATK-IVEAVYE---PLP---EGMYSEDVTDVITSCLTPDA  254 (269)
T ss_pred             CCCCchHHHHHHHHHHHHHHHhCCCcccccC-----HHHHHHH-HhhccCC---cCC---cccCCHHHHHHHHHHCCCCC
Confidence            4567889999999999999999998874321     1111111 1112111   111   11222378899999999999


Q ss_pred             CCCCCHHHHHHHHh
Q 047465           84 DDRPTVYDVVSMLT   97 (139)
Q Consensus        84 ~~Rps~~~v~~~L~   97 (139)
                      ++||++.++..+++
T Consensus       255 ~~Rp~~~e~~~~~~  268 (269)
T cd08528         255 EARPDIIQVSAMIS  268 (269)
T ss_pred             ccCCCHHHHHHHhc
Confidence            99999999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.18  E-value=1.1e-10  Score=83.11  Aligned_cols=82  Identities=18%  Similarity=0.197  Sum_probs=55.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||||++++||++ |+.|+.....  .......   .....     ....  +......+.+++..||+.+
T Consensus       174 ~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~---~~~~~-----~~~~--~~~~~~~~~~li~~~l~~~  241 (257)
T cd05040         174 TRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSG--SQILKKI---DKEGE-----RLER--PEACPQDIYNVMLQCWAHN  241 (257)
T ss_pred             ccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH---HhcCC-----cCCC--CccCCHHHHHHHHHHCCCC
Confidence            4567889999999999999998 8888753211  1111111   11111     1111  3333348889999999999


Q ss_pred             CCCCCCHHHHHHHHh
Q 047465           83 ADDRPTVYDVVSMLT   97 (139)
Q Consensus        83 p~~Rps~~~v~~~L~   97 (139)
                      |.+||++.+++..|.
T Consensus       242 p~~Rps~~~~~~~l~  256 (257)
T cd05040         242 PADRPTFAALREFLP  256 (257)
T ss_pred             cccCCCHHHHHHHhc
Confidence            999999999998875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.17  E-value=6.1e-11  Score=85.55  Aligned_cols=84  Identities=19%  Similarity=0.191  Sum_probs=58.6

Q ss_pred             CCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ..++.++||||||+++||+++ |+.|+....  ......    ....+...     ..  +...+..+.+++.+||..+|
T Consensus       194 ~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~----~~~~~~~~-----~~--~~~~~~~~~~li~~~l~~~p  260 (280)
T cd05043         194 KEYSSASDVWSFGVLLWELMTLGQTPYVEID--PFEMAA----YLKDGYRL-----AQ--PINCPDELFAVMACCWALDP  260 (280)
T ss_pred             CCCCchhhHHHhHHHHHHHhcCCCCCcCcCC--HHHHHH----HHHcCCCC-----CC--CCcCCHHHHHHHHHHcCCCh
Confidence            456889999999999999998 888875321  111111    11122111     11  22233478999999999999


Q ss_pred             CCCCCHHHHHHHHhcccC
Q 047465           84 DDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~  101 (139)
                      ++||++.+++..|+.+..
T Consensus       261 ~~Rps~~~~~~~l~~~~~  278 (280)
T cd05043         261 EERPSFSQLVQCLTDFHA  278 (280)
T ss_pred             hhCCCHHHHHHHHHHHHh
Confidence            999999999999987654

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.17  E-value=9.2e-11  Score=85.04  Aligned_cols=82  Identities=18%  Similarity=0.182  Sum_probs=55.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||++++|+++ +..|+....     ..... .....+...   ..    +......+.+++.+||+.+
T Consensus       206 ~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~-----~~~~~-~~~~~~~~~---~~----~~~~~~~l~~li~~~l~~~  272 (288)
T cd05050         206 YNRYTTESDVWAYGVVLWEIFSYGMQPYYGMA-----HEEVI-YYVRDGNVL---SC----PDNCPLELYNLMRLCWSKL  272 (288)
T ss_pred             cCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC-----HHHHH-HHHhcCCCC---CC----CCCCCHHHHHHHHHHcccC
Confidence            4567889999999999999997 666663211     11111 122222221   11    2222237899999999999


Q ss_pred             CCCCCCHHHHHHHHhc
Q 047465           83 ADDRPTVYDVVSMLTN   98 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~   98 (139)
                      |.+||++.++++.|++
T Consensus       273 p~~Rpt~~el~~~l~~  288 (288)
T cd05050         273 PSDRPSFASINRILQR  288 (288)
T ss_pred             cccCCCHHHHHHHhhC
Confidence            9999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.17  E-value=9.2e-11  Score=83.68  Aligned_cols=81  Identities=31%  Similarity=0.370  Sum_probs=56.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++|+||||+++||+++ |+.|+.....  ..   .. .....+...       .++......+..++.+||..+
T Consensus       175 ~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~---~~-~~~~~~~~~-------~~~~~~~~~~~~li~~cl~~~  241 (256)
T cd05059         175 YSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN--SE---VV-ESVSAGYRL-------YRPKLAPTEVYTIMYSCWHEK  241 (256)
T ss_pred             cCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH--HH---HH-HHHHcCCcC-------CCCCCCCHHHHHHHHHHhcCC
Confidence            4567789999999999999998 6777743211  11   11 112222111       114444458899999999999


Q ss_pred             CCCCCCHHHHHHHHh
Q 047465           83 ADDRPTVYDVVSMLT   97 (139)
Q Consensus        83 p~~Rps~~~v~~~L~   97 (139)
                      |++||++.+++..|.
T Consensus       242 p~~Rpt~~~~l~~l~  256 (256)
T cd05059         242 PEDRPAFKKLLSQLT  256 (256)
T ss_pred             hhhCcCHHHHHHHhC
Confidence            999999999998763

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.16  E-value=1e-10  Score=85.01  Aligned_cols=89  Identities=20%  Similarity=0.231  Sum_probs=55.5

Q ss_pred             CCCCCccchhhhHhHHHHHHHh--CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS--GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      ++.++.++||||||++++|+++  +..|+....  ...................  ....  +......+.+++.+||+.
T Consensus       206 ~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~l~~li~~cl~~  279 (296)
T cd05051         206 LGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT--DQQVIENAGHFFRDDGRQI--YLPR--PPNCPKDIYELMLECWRR  279 (296)
T ss_pred             cCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC--hHHHHHHHHhccccccccc--cCCC--ccCCCHHHHHHHHHHhcc
Confidence            4567889999999999999998  444543211  1111121111111111110  1111  223334889999999999


Q ss_pred             CCCCCCCHHHHHHHHhc
Q 047465           82 SADDRPTVYDVVSMLTN   98 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~~   98 (139)
                      +|.+||++.+++..|++
T Consensus       280 ~p~~Rpt~~el~~~L~~  296 (296)
T cd05051         280 DEEDRPTFREIHLFLQR  296 (296)
T ss_pred             ChhcCCCHHHHHHHhcC
Confidence            99999999999998863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.16  E-value=1.1e-10  Score=82.94  Aligned_cols=82  Identities=20%  Similarity=0.197  Sum_probs=55.5

Q ss_pred             CCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      .++.++.++|+||+|++++|+++ |..|+.....  ..    ...........   ..    +......+.+++.+|++.
T Consensus       169 ~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~--~~----~~~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~  235 (252)
T cd05084         169 NYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN--QQ----TREAIEQGVRL---PC----PELCPDAVYRLMERCWEY  235 (252)
T ss_pred             cCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH--HH----HHHHHHcCCCC---CC----cccCCHHHHHHHHHHcCC
Confidence            34567889999999999999997 7766642211  11    11111111111   11    223334788999999999


Q ss_pred             CCCCCCCHHHHHHHHh
Q 047465           82 SADDRPTVYDVVSMLT   97 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~   97 (139)
                      +|.+||++.++.+.|+
T Consensus       236 ~p~~Rps~~~~~~~l~  251 (252)
T cd05084         236 DPGQRPSFSTVHQELQ  251 (252)
T ss_pred             ChhhCcCHHHHHHHHh
Confidence            9999999999999886

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.16  E-value=1.1e-10  Score=83.18  Aligned_cols=83  Identities=22%  Similarity=0.183  Sum_probs=56.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||||++++|+++ |+.|+...     ...... .....+...   ..    +......+..++.+||+.+
T Consensus       173 ~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~-----~~~~~~-~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~~  239 (256)
T cd05082         173 EKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-----PLKDVV-PRVEKGYKM---DA----PDGCPPVVYDVMKQCWHLD  239 (256)
T ss_pred             cCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-----CHHHHH-HHHhcCCCC---CC----CCCCCHHHHHHHHHHhcCC
Confidence            4467889999999999999997 77776421     111111 112122211   11    2222337889999999999


Q ss_pred             CCCCCCHHHHHHHHhcc
Q 047465           83 ADDRPTVYDVVSMLTNE   99 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~   99 (139)
                      |++||++.+++..|+.+
T Consensus       240 p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         240 AATRPSFLQLREQLEHI  256 (256)
T ss_pred             hhhCcCHHHHHHHHhcC
Confidence            99999999999988753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.15  E-value=1.3e-10  Score=84.00  Aligned_cols=82  Identities=26%  Similarity=0.296  Sum_probs=55.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++|+||||++++|+++ |..|+....  .....    .........   ..    +......+..++.+||+.+
T Consensus       200 ~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~--~~~~~----~~~~~~~~~---~~----~~~~~~~~~~li~~cl~~~  266 (283)
T cd05090         200 YGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS--NQEVI----EMVRKRQLL---PC----SEDCPPRMYSLMTECWQEG  266 (283)
T ss_pred             cCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC--HHHHH----HHHHcCCcC---CC----CCCCCHHHHHHHHHHcccC
Confidence            4567889999999999999998 777764211  11111    112122211   11    2223347889999999999


Q ss_pred             CCCCCCHHHHHHHHhc
Q 047465           83 ADDRPTVYDVVSMLTN   98 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~   98 (139)
                      |.+||++.++.+.|..
T Consensus       267 p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         267 PSRRPRFKDIHTRLRS  282 (283)
T ss_pred             cccCcCHHHHHHHhhc
Confidence            9999999999988764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.15  E-value=1.1e-10  Score=89.12  Aligned_cols=86  Identities=15%  Similarity=0.246  Sum_probs=58.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||+++||+++ |..|++.... ...    .......+...   ..    +......+.+++..||+.+
T Consensus       313 ~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~-~~~----~~~~~~~~~~~---~~----~~~~~~~l~~li~~cl~~d  380 (400)
T cd05105         313 DNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIV-DST----FYNKIKSGYRM---AK----PDHATQEVYDIMVKCWNSE  380 (400)
T ss_pred             CCCCCchhhHHHHHHHHHHHHHCCCCCCcccch-hHH----HHHHHhcCCCC---CC----CccCCHHHHHHHHHHCccC
Confidence            4567889999999999999997 8888753211 111    11112222211   11    2223347889999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |++||++.++.+.|+++..
T Consensus       381 P~~RPt~~~l~~~l~~l~~  399 (400)
T cd05105         381 PEKRPSFLHLSDIVESLLP  399 (400)
T ss_pred             HhHCcCHHHHHHHHHHHcC
Confidence            9999999999999987643

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.15  E-value=1.4e-10  Score=82.20  Aligned_cols=82  Identities=17%  Similarity=0.132  Sum_probs=55.8

Q ss_pred             CCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      .++.++.++|+||||++++++++ |..|+.....  .   . .......+...   ..    +......+.+++..||+.
T Consensus       167 ~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~--~---~-~~~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~  233 (250)
T cd05085         167 NYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN--Q---Q-AREQVEKGYRM---SC----PQKCPDDVYKVMQRCWDY  233 (250)
T ss_pred             ccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH--H---H-HHHHHHcCCCC---CC----CCCCCHHHHHHHHHHccc
Confidence            34567889999999999999998 8878753211  1   1 11112222211   11    222233788999999999


Q ss_pred             CCCCCCCHHHHHHHHh
Q 047465           82 SADDRPTVYDVVSMLT   97 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~   97 (139)
                      +|.+||++.++++.|.
T Consensus       234 ~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         234 KPENRPKFSELQKELA  249 (250)
T ss_pred             CcccCCCHHHHHHHhc
Confidence            9999999999998875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.15  E-value=1.4e-10  Score=82.76  Aligned_cols=82  Identities=24%  Similarity=0.299  Sum_probs=56.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++|+||||++++|+++ |+.|+....  ....   . ..+..+...   ..    +......+.+++.+||..+
T Consensus       177 ~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~---~-~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~~  243 (260)
T cd05067         177 YGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT--NPEV---I-QNLERGYRM---PR----PDNCPEELYELMRLCWKEK  243 (260)
T ss_pred             cCCcCcccchHHHHHHHHHHHhCCCCCCCCCC--hHHH---H-HHHHcCCCC---CC----CCCCCHHHHHHHHHHccCC
Confidence            3556789999999999999998 888875321  1111   1 112222211   11    2222337899999999999


Q ss_pred             CCCCCCHHHHHHHHhc
Q 047465           83 ADDRPTVYDVVSMLTN   98 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~   98 (139)
                      |++||++.++...|++
T Consensus       244 p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         244 PEERPTFEYLRSVLED  259 (260)
T ss_pred             hhhCCCHHHHHHHhhc
Confidence            9999999999998875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.15  E-value=1.6e-10  Score=82.23  Aligned_cols=84  Identities=21%  Similarity=0.126  Sum_probs=57.1

Q ss_pred             CCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      ..+.++.++|+||||++++|+++ |+.|+....  ...    .......+...   ..    +......+.+++.+||..
T Consensus       172 ~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--~~~----~~~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~  238 (256)
T cd05039         172 REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--LKD----VVPHVEKGYRM---EA----PEGCPPEVYKVMKDCWEL  238 (256)
T ss_pred             cCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC--HHH----HHHHHhcCCCC---CC----ccCCCHHHHHHHHHHhcc
Confidence            34567789999999999999997 887774321  111    11111112111   11    222233788999999999


Q ss_pred             CCCCCCCHHHHHHHHhcc
Q 047465           82 SADDRPTVYDVVSMLTNE   99 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~~~   99 (139)
                      +|.+||++.+++..|+++
T Consensus       239 ~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         239 DPAKRPTFKQLREQLALI  256 (256)
T ss_pred             ChhhCcCHHHHHHHHhcC
Confidence            999999999999998753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.14  E-value=1.3e-10  Score=83.89  Aligned_cols=82  Identities=20%  Similarity=0.245  Sum_probs=55.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||++++|+++ +..|+....  ......    ........   ..    +......+..++.+||+.+
T Consensus       195 ~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~--~~~~~~----~~~~~~~~---~~----~~~~~~~~~~li~~~l~~~  261 (277)
T cd05062         195 DGVFTTYSDVWSFGVVLWEIATLAEQPYQGMS--NEQVLR----FVMEGGLL---DK----PDNCPDMLFELMRMCWQYN  261 (277)
T ss_pred             cCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHH----HHHcCCcC---CC----CCCCCHHHHHHHHHHcCCC
Confidence            4567889999999999999998 566664221  111111    11112211   11    2223337889999999999


Q ss_pred             CCCCCCHHHHHHHHhc
Q 047465           83 ADDRPTVYDVVSMLTN   98 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~   98 (139)
                      |.+||++.+++..|+.
T Consensus       262 p~~Rps~~e~l~~l~~  277 (277)
T cd05062         262 PKMRPSFLEIISSIKE  277 (277)
T ss_pred             hhhCcCHHHHHHHhhC
Confidence            9999999999998763

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.14  E-value=1.2e-10  Score=83.75  Aligned_cols=82  Identities=23%  Similarity=0.287  Sum_probs=56.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||++++|+++ |..|+....  ......    ....+...   ..    |......+.+++..||+.+
T Consensus       195 ~~~~~~~~Di~slG~il~el~t~g~~p~~~~~--~~~~~~----~~~~~~~~---~~----~~~~~~~~~~li~~~l~~~  261 (277)
T cd05032         195 DGVFTTKSDVWSFGVVLWEMATLAEQPYQGLS--NEEVLK----FVIDGGHL---DL----PENCPDKLLELMRMCWQYN  261 (277)
T ss_pred             cCCCCcccchHHHHHHHHHhhccCCCCCccCC--HHHHHH----HHhcCCCC---CC----CCCCCHHHHHHHHHHcCCC
Confidence            4567889999999999999998 777764321  111111    12222222   11    2223448889999999999


Q ss_pred             CCCCCCHHHHHHHHhc
Q 047465           83 ADDRPTVYDVVSMLTN   98 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~   98 (139)
                      |.+||++.+++..|+.
T Consensus       262 p~~Rpt~~~l~~~l~~  277 (277)
T cd05032         262 PKMRPTFLEIVSSLKD  277 (277)
T ss_pred             hhhCCCHHHHHHHhcC
Confidence            9999999999998863

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.14  E-value=1.9e-10  Score=82.27  Aligned_cols=87  Identities=17%  Similarity=0.207  Sum_probs=57.3

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++|+||||+++|++++|..|+.....   ...... .........   ...   +......+..++.+||+.+|
T Consensus       180 ~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~-~~~~~~~~~---~~~---~~~~~~~~~~li~~~l~~~p  249 (267)
T cd08229         180 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYSLC-KKIEQCDYP---PLP---SDHYSEELRQLVNMCINPDP  249 (267)
T ss_pred             CCCccchhhHHHHHHHHHHHHhCCCCcccccc---hHHHHh-hhhhcCCCC---CCC---cccccHHHHHHHHHhcCCCc
Confidence            34567889999999999999999998742211   111111 111111111   110   11122378889999999999


Q ss_pred             CCCCCHHHHHHHHhccc
Q 047465           84 DDRPTVYDVVSMLTNEA  100 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~  100 (139)
                      .+||++.++++.+++.+
T Consensus       250 ~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         250 EKRPDITYVYDVAKRMH  266 (267)
T ss_pred             ccCCCHHHHHHHHhhhc
Confidence            99999999999988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.14  E-value=1.7e-10  Score=84.52  Aligned_cols=84  Identities=19%  Similarity=0.268  Sum_probs=57.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||+|++++|+++ |..|+..... ...+.    .....+...   .  .  +......+.+++.+|+..+
T Consensus       217 ~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~-~~~~~----~~~~~~~~~---~--~--~~~~~~~~~~li~~cl~~~  284 (302)
T cd05055         217 NCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV-DSKFY----KLIKEGYRM---A--Q--PEHAPAEIYDIMKTCWDAD  284 (302)
T ss_pred             cCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc-hHHHH----HHHHcCCcC---C--C--CCCCCHHHHHHHHHHcCCC
Confidence            4456789999999999999998 8888753221 11111    111112111   1  1  2222337899999999999


Q ss_pred             CCCCCCHHHHHHHHhcc
Q 047465           83 ADDRPTVYDVVSMLTNE   99 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~   99 (139)
                      |.+||++.+++..|++.
T Consensus       285 p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         285 PLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             chhCcCHHHHHHHHHhh
Confidence            99999999999998864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.14  E-value=1.2e-10  Score=86.19  Aligned_cols=86  Identities=19%  Similarity=0.249  Sum_probs=59.9

Q ss_pred             CCCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            2 ALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         2 ~~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      +.++.|+.++||||||..++|+..|+-|+.................. .+..+   .+.   ......++..++..|+++
T Consensus       249 i~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv-~~ppP---~lP---~~~fS~ef~~FV~~CL~K  321 (364)
T KOG0581|consen  249 ISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIV-DEPPP---RLP---EGEFSPEFRSFVSCCLRK  321 (364)
T ss_pred             hcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHh-cCCCC---CCC---cccCCHHHHHHHHHHhcC
Confidence            45678999999999999999999999998654222222222222222 22222   221   113445899999999999


Q ss_pred             CCCCCCCHHHHHH
Q 047465           82 SADDRPTVYDVVS   94 (139)
Q Consensus        82 ~p~~Rps~~~v~~   94 (139)
                      +|.+||+..+++.
T Consensus       322 dp~~R~s~~qLl~  334 (364)
T KOG0581|consen  322 DPSERPSAKQLLQ  334 (364)
T ss_pred             CcccCCCHHHHhc
Confidence            9999999999875

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.14  E-value=1.5e-10  Score=83.61  Aligned_cols=85  Identities=19%  Similarity=0.162  Sum_probs=58.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||+++||+++ |..|+....  ......    ....+...   ..    +......+..++..||+.+
T Consensus       185 ~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~~----~~~~~~~~---~~----~~~~~~~~~~li~~~l~~d  251 (279)
T cd05109         185 HRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP--AREIPD----LLEKGERL---PQ----PPICTIDVYMIMVKCWMID  251 (279)
T ss_pred             cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHH----HHHCCCcC---CC----CccCCHHHHHHHHHHcCCC
Confidence            4557889999999999999998 777774321  111111    12222221   11    2223347889999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |..||++.+++..|++...
T Consensus       252 p~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05109         252 SECRPRFRELVDEFSRMAR  270 (279)
T ss_pred             hhhCcCHHHHHHHHHHhhc
Confidence            9999999999999887755

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.14  E-value=1.9e-10  Score=82.20  Aligned_cols=77  Identities=17%  Similarity=0.182  Sum_probs=51.0

Q ss_pred             CCCccchhhhHhHHHHHHHhCCC-CCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKK-NTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      .++.++||||||+++||+++|.. |+.....  .   ... .......     .+    |......+.+++..||+.+|+
T Consensus       181 ~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~--~---~~~-~~~~~~~-----~~----~~~~~~~~~~li~~~l~~~p~  245 (258)
T cd05078         181 NLSLAADKWSFGTTLWEIFSGGDKPLSALDS--Q---KKL-QFYEDRH-----QL----PAPKWTELANLINQCMDYEPD  245 (258)
T ss_pred             CCCchhhHHHHHHHHHHHHcCCCCChhhccH--H---HHH-HHHHccc-----cC----CCCCcHHHHHHHHHHhccChh
Confidence            46789999999999999999854 4321111  0   001 1111111     11    222223788999999999999


Q ss_pred             CCCCHHHHHHHHh
Q 047465           85 DRPTVYDVVSMLT   97 (139)
Q Consensus        85 ~Rps~~~v~~~L~   97 (139)
                      +||++.++++.|+
T Consensus       246 ~Rps~~~il~~l~  258 (258)
T cd05078         246 FRPSFRAIIRDLN  258 (258)
T ss_pred             hCCCHHHHHHhcC
Confidence            9999999998874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.13  E-value=1.4e-10  Score=88.62  Aligned_cols=85  Identities=15%  Similarity=0.226  Sum_probs=58.2

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||++++|+++ |+.|+...... ..    .......+...   .  .  |......+.+++..||+.+
T Consensus       315 ~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~-~~----~~~~~~~~~~~---~--~--p~~~~~~l~~li~~cl~~~  382 (401)
T cd05107         315 NNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN-EQ----FYNAIKRGYRM---A--K--PAHASDEIYEIMQKCWEEK  382 (401)
T ss_pred             CCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch-HH----HHHHHHcCCCC---C--C--CCCCCHHHHHHHHHHcCCC
Confidence            3456889999999999999998 77777532211 11    11111122111   1  1  3333348899999999999


Q ss_pred             CCCCCCHHHHHHHHhccc
Q 047465           83 ADDRPTVYDVVSMLTNEA  100 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~  100 (139)
                      |.+||++.+++..|+++.
T Consensus       383 P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         383 FEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             hhHCcCHHHHHHHHHHHh
Confidence            999999999999998753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.12  E-value=1.7e-10  Score=81.92  Aligned_cols=79  Identities=18%  Similarity=0.313  Sum_probs=53.5

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ++.++.++|+||||++++++++|+.|+.....     .... .....+...   .+    +......+.+++.+||+.+|
T Consensus       175 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~-~~~~~~~~~---~~----~~~~~~~~~~~i~~~l~~~p  241 (256)
T cd08529         175 DKPYNEKSDVWALGVVLYECCTGKHPFDANNQ-----GALI-LKIIRGVFP---PV----SQMYSQQLAQLIDQCLTKDY  241 (256)
T ss_pred             CCCCCCccchHHHHHHHHHHHhCCCCCCCCCH-----HHHH-HHHHcCCCC---CC----ccccCHHHHHHHHHHccCCc
Confidence            44567899999999999999999999853221     1111 111122222   11    11222378899999999999


Q ss_pred             CCCCCHHHHHHH
Q 047465           84 DDRPTVYDVVSM   95 (139)
Q Consensus        84 ~~Rps~~~v~~~   95 (139)
                      ++||++.+++..
T Consensus       242 ~~Rp~~~~ll~~  253 (256)
T cd08529         242 RQRPDTFQLLRN  253 (256)
T ss_pred             ccCcCHHHHhhC
Confidence            999999998753

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.12  E-value=2e-10  Score=82.43  Aligned_cols=79  Identities=15%  Similarity=0.152  Sum_probs=51.5

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||||+++||+++ |+.|+....     ... ...... ...    ..    .......+..++.+||+.+
T Consensus       183 ~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~-----~~~-~~~~~~-~~~----~~----~~~~~~~~~~li~~cl~~d  247 (262)
T cd05077         183 SKNLSIAADKWSFGTTLWEICYNGEIPLKDKT-----LAE-KERFYE-GQC----ML----VTPSCKELADLMTHCMNYD  247 (262)
T ss_pred             CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcc-----hhH-HHHHHh-cCc----cC----CCCChHHHHHHHHHHcCCC
Confidence            3457889999999999999985 666653211     111 111111 111    11    1111237889999999999


Q ss_pred             CCCCCCHHHHHHHHh
Q 047465           83 ADDRPTVYDVVSMLT   97 (139)
Q Consensus        83 p~~Rps~~~v~~~L~   97 (139)
                      |.+||++.+++..++
T Consensus       248 p~~Rp~~~~il~~~~  262 (262)
T cd05077         248 PNQRPFFRAIMRDIN  262 (262)
T ss_pred             hhhCcCHHHHHHhcC
Confidence            999999999988763

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.12  E-value=1.6e-10  Score=86.23  Aligned_cols=86  Identities=26%  Similarity=0.283  Sum_probs=59.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||||+++|++++ |..|+..... ....    ......+...   ..    |......+..++..||+.+
T Consensus       255 ~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-~~~~----~~~~~~~~~~---~~----~~~~~~~~~~~~~~cl~~~  322 (343)
T cd05103         255 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEF----CRRLKEGTRM---RA----PDYTTPEMYQTMLDCWHGE  322 (343)
T ss_pred             CCCCCchhhHHHHHHHHHHHHHCCCCCCCCccc-cHHH----HHHHhccCCC---CC----CCCCCHHHHHHHHHHccCC
Confidence            4457889999999999999997 7777753221 1111    1112222222   11    2223337899999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.++++.|+.+.+
T Consensus       323 p~~Rps~~eil~~l~~~~~  341 (343)
T cd05103         323 PSQRPTFSELVEHLGNLLQ  341 (343)
T ss_pred             hhhCcCHHHHHHHHHHHHh
Confidence            9999999999999987654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.12  E-value=1.7e-10  Score=84.50  Aligned_cols=85  Identities=18%  Similarity=0.182  Sum_probs=58.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++|+||+|++++|+++ |..|+.....     .. .......+...   +.    +......+.+++..||..+
T Consensus       216 ~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~-----~~-~~~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~~  282 (307)
T cd05098         216 DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-----EE-LFKLLKEGHRM---DK----PSNCTNELYMMMRDCWHAV  282 (307)
T ss_pred             cCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH-----HH-HHHHHHcCCCC---CC----CCcCCHHHHHHHHHHcccC
Confidence            4557889999999999999998 7777642211     11 11112222222   11    2222337889999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.+++..|+.+..
T Consensus       283 p~~Rps~~evl~~l~~~~~  301 (307)
T cd05098         283 PSQRPTFKQLVEDLDRILA  301 (307)
T ss_pred             hhhCcCHHHHHHHHHHHHH
Confidence            9999999999999988654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.12  E-value=1.7e-10  Score=84.42  Aligned_cols=85  Identities=20%  Similarity=0.176  Sum_probs=58.3

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||||+++||+++ |+.|+....  ......    ....+...     ..  +......+..++..||..+
T Consensus       185 ~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~--~~~~~~----~~~~~~~~-----~~--~~~~~~~~~~li~~c~~~~  251 (303)
T cd05110         185 YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP--TREIPD----LLEKGERL-----PQ--PPICTIDVYMVMVKCWMID  251 (303)
T ss_pred             cCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHH----HHHCCCCC-----CC--CCCCCHHHHHHHHHHcCCC
Confidence            4557889999999999999997 788774321  111111    12222211     11  2333347888999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |++||++.+++..|..+..
T Consensus       252 p~~Rp~~~~l~~~l~~~~~  270 (303)
T cd05110         252 ADSRPKFKELAAEFSRMAR  270 (303)
T ss_pred             hhhCcCHHHHHHHHHHHHh
Confidence            9999999999999887644

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.11  E-value=2.5e-10  Score=81.55  Aligned_cols=82  Identities=22%  Similarity=0.301  Sum_probs=55.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++|+||||++++|+++ |..|+....  .....    ..+..+...   ..    +......+.+++.+|+..+
T Consensus       177 ~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~--~~~~~----~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~~  243 (260)
T cd05070         177 YGRFTIKSDVWSFGILLTELVTKGRVPYPGMN--NREVL----EQVERGYRM---PC----PQDCPISLHELMLQCWKKD  243 (260)
T ss_pred             cCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC--HHHHH----HHHHcCCCC---CC----CCcCCHHHHHHHHHHcccC
Confidence            3457789999999999999999 777774321  11111    112112111   11    2222337889999999999


Q ss_pred             CCCCCCHHHHHHHHhc
Q 047465           83 ADDRPTVYDVVSMLTN   98 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~   98 (139)
                      |.+||++.++...|++
T Consensus       244 p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         244 PEERPTFEYLQSFLED  259 (260)
T ss_pred             cccCcCHHHHHHHHhc
Confidence            9999999999988875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.11  E-value=1.5e-10  Score=83.02  Aligned_cols=82  Identities=18%  Similarity=0.133  Sum_probs=55.2

Q ss_pred             CCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +.++.++||||||+++||+++ |+.|+....  .......    .......   ..    +......+.+++.+||+.+|
T Consensus       190 ~~~~~~sDi~slG~il~el~~~g~~p~~~~~--~~~~~~~----~~~~~~~---~~----~~~~~~~~~~l~~~~l~~~p  256 (273)
T cd05074         190 NVYTTHSDVWAFGVTMWEIMTRGQTPYAGVE--NSEIYNY----LIKGNRL---KQ----PPDCLEDVYELMCQCWSPEP  256 (273)
T ss_pred             CccchhhhhHHHHHHHHHHhhCCCCCCCCCC--HHHHHHH----HHcCCcC---CC----CCCCCHHHHHHHHHHcCCCh
Confidence            346788999999999999998 667664221  1111111    1111111   10    11222378999999999999


Q ss_pred             CCCCCHHHHHHHHhcc
Q 047465           84 DDRPTVYDVVSMLTNE   99 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~   99 (139)
                      ++||++.+++..|+++
T Consensus       257 ~~Rps~~~~~~~l~~~  272 (273)
T cd05074         257 KCRPSFQHLRDQLELI  272 (273)
T ss_pred             hhCcCHHHHHHHHHhh
Confidence            9999999999999864

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.11  E-value=2.2e-10  Score=83.76  Aligned_cols=85  Identities=21%  Similarity=0.215  Sum_probs=58.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||||+++|++++ |..|+...     ...... .....+...   ..    +......+..++.+||+.+
T Consensus       213 ~~~~~~~~Di~slG~~l~el~~~g~~p~~~~-----~~~~~~-~~~~~~~~~---~~----~~~~~~~~~~li~~cl~~~  279 (304)
T cd05101         213 DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-----PVEELF-KLLKEGHRM---DK----PANCTNELYMMMRDCWHAI  279 (304)
T ss_pred             cCCCCchhhHHHHHHHHHHHHcCCCCCcccC-----CHHHHH-HHHHcCCcC---CC----CCCCCHHHHHHHHHHcccC
Confidence            4457889999999999999998 66666422     111111 122222221   11    3333347889999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.++++.|.++..
T Consensus       280 p~~Rps~~e~l~~l~~~~~  298 (304)
T cd05101         280 PSHRPTFKQLVEDLDRILT  298 (304)
T ss_pred             hhhCCCHHHHHHHHHHHHH
Confidence            9999999999999987655

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.10  E-value=3.1e-10  Score=80.51  Aligned_cols=82  Identities=18%  Similarity=0.218  Sum_probs=55.5

Q ss_pred             CCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      .++.++.++|+||+|++++|+++ +..|+.....     .. ..........     ...  +......+.+++.+||..
T Consensus       168 ~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~-----~~-~~~~~~~~~~-----~~~--~~~~~~~~~~li~~~l~~  234 (251)
T cd05041         168 NYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN-----QQ-TRERIESGYR-----MPA--PQLCPEEIYRLMLQCWAY  234 (251)
T ss_pred             ccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH-----HH-HHHHHhcCCC-----CCC--CccCCHHHHHHHHHHhcc
Confidence            34567889999999999999998 6766642211     11 1111111111     111  333334889999999999


Q ss_pred             CCCCCCCHHHHHHHHh
Q 047465           82 SADDRPTVYDVVSMLT   97 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~   97 (139)
                      +|.+||++.+++..|.
T Consensus       235 ~p~~Rp~~~ell~~l~  250 (251)
T cd05041         235 DPENRPSFSEIYNELQ  250 (251)
T ss_pred             ChhhCcCHHHHHHHhh
Confidence            9999999999999875

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.10  E-value=1.3e-10  Score=82.53  Aligned_cols=80  Identities=16%  Similarity=0.230  Sum_probs=52.0

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||||+++|++++|+.|+......     ..... .......   .+..  +......+.+++..||+.+|
T Consensus       173 ~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~-----~~~~~-~~~~~~~---~~~~--~~~~~~~~~~~i~~~l~~~P  241 (256)
T cd06612         173 EIGYNNKADIWSLGITAIEMAEGKPPYSDIHPM-----RAIFM-IPNKPPP---TLSD--PEKWSPEFNDFVKKCLVKDP  241 (256)
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCCCCcchh-----hhhhh-hccCCCC---CCCc--hhhcCHHHHHHHHHHHhcCh
Confidence            345778999999999999999999988532211     00100 1001111   1111  11122378889999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       242 ~~Rps~~~il~  252 (256)
T cd06612         242 EERPSAIQLLQ  252 (256)
T ss_pred             hhCcCHHHHhc
Confidence            99999999875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.10  E-value=3e-10  Score=81.17  Aligned_cols=82  Identities=23%  Similarity=0.325  Sum_probs=55.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++|+||||++++|+++ |+.|+....  .....    .....+...   ..    +......+.+++.+||+.+
T Consensus       177 ~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~----~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~~  243 (260)
T cd05069         177 YGRFTIKSDVWSFGILLTELVTKGRVPYPGMV--NREVL----EQVERGYRM---PC----PQGCPESLHELMKLCWKKD  243 (260)
T ss_pred             cCCcChHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHH----HHHHcCCCC---CC----CcccCHHHHHHHHHHccCC
Confidence            3567789999999999999999 777774321  11111    111111111   11    2222337889999999999


Q ss_pred             CCCCCCHHHHHHHHhc
Q 047465           83 ADDRPTVYDVVSMLTN   98 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~   98 (139)
                      |.+||++.+++..|++
T Consensus       244 p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         244 PDERPTFEYIQSFLED  259 (260)
T ss_pred             cccCcCHHHHHHHHhc
Confidence            9999999999998875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.10  E-value=2.3e-10  Score=82.14  Aligned_cols=83  Identities=22%  Similarity=0.206  Sum_probs=56.2

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||++++|+++ |..|+....  .......    +......     ..  +......+.+++..||+.+
T Consensus       185 ~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~--~~~~~~~----i~~~~~~-----~~--~~~~~~~~~~li~~~l~~~  251 (269)
T cd05065         185 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMS--NQDVINA----IEQDYRL-----PP--PMDCPTALHQLMLDCWQKD  251 (269)
T ss_pred             cCcccchhhhhhhHHHHHHHhcCCCCCCCCCC--HHHHHHH----HHcCCcC-----CC--cccCCHHHHHHHHHHcCCC
Confidence            4567889999999999999886 888774321  1111111    1111111     11  2222337888999999999


Q ss_pred             CCCCCCHHHHHHHHhcc
Q 047465           83 ADDRPTVYDVVSMLTNE   99 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~   99 (139)
                      |.+||++.+++..|++.
T Consensus       252 p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         252 RNARPKFGQIVSTLDKM  268 (269)
T ss_pred             hhhCcCHHHHHHHHHhh
Confidence            99999999999988764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.10  E-value=2.8e-10  Score=80.99  Aligned_cols=83  Identities=19%  Similarity=0.159  Sum_probs=56.7

Q ss_pred             CCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      .++.++.++|+||+|++++|+++ |+.|+.....     ... ......+...   ..    +......+.+++..||+.
T Consensus       170 ~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~-~~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~  236 (254)
T cd05083         170 KHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL-----KEV-KECVEKGYRM---EP----PEGCPADVYVLMTSCWET  236 (254)
T ss_pred             ccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH-----HHH-HHHHhCCCCC---CC----CCcCCHHHHHHHHHHcCC
Confidence            34567889999999999999997 8877753211     111 1122222222   11    112223788999999999


Q ss_pred             CCCCCCCHHHHHHHHhc
Q 047465           82 SADDRPTVYDVVSMLTN   98 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~~   98 (139)
                      +|++||++.+++..|++
T Consensus       237 ~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         237 EPKKRPSFHKLREKLEK  253 (254)
T ss_pred             ChhhCcCHHHHHHHHcc
Confidence            99999999999998875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.10  E-value=6.1e-11  Score=84.09  Aligned_cols=87  Identities=18%  Similarity=0.263  Sum_probs=59.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +...++++||||+||++|+|+.|..||+........+...    ...+..    .+.+  ....+..+.++...|++.||
T Consensus       215 ~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLA----v~n~q~----s~P~--~~~yse~l~~lik~mlqvdP  284 (302)
T KOG2345|consen  215 HCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALA----VQNAQI----SIPN--SSRYSEALHQLIKSMLQVDP  284 (302)
T ss_pred             CcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEe----eecccc----ccCC--CCCccHHHHHHHHHHhcCCc
Confidence            4567899999999999999999999996322211000000    111111    1211  22234478899999999999


Q ss_pred             CCCCCHHHHHHHHhccc
Q 047465           84 DDRPTVYDVVSMLTNEA  100 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~  100 (139)
                      .+||++.+++..++.+.
T Consensus       285 ~qRP~i~~ll~~~d~Li  301 (302)
T KOG2345|consen  285 NQRPTIPELLSKLDDLI  301 (302)
T ss_pred             ccCCCHHHHHHHHHhhc
Confidence            99999999999887653

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.09  E-value=7.3e-11  Score=91.10  Aligned_cols=90  Identities=21%  Similarity=0.289  Sum_probs=65.3

Q ss_pred             CCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      ..+.|+.++|||||||++||+.+ |..|++..     ............+...   ..    |...+..+..++..||..
T Consensus       335 ~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~-----~~~~v~~kI~~~~~r~---~~----~~~~p~~~~~~~~~c~~~  402 (474)
T KOG0194|consen  335 NTGIFSFKTDVWSFGVLLWEIFENGAEPYPGM-----KNYEVKAKIVKNGYRM---PI----PSKTPKELAKVMKQCWKK  402 (474)
T ss_pred             ccCccccccchhheeeeEEeeeccCCCCCCCC-----CHHHHHHHHHhcCccC---CC----CCCCHHHHHHHHHHhccC
Confidence            45689999999999999999998 67777532     2222222222444433   22    445555888899999999


Q ss_pred             CCCCCCCHHHHHHHHhcccCCCC
Q 047465           82 SADDRPTVYDVVSMLTNEATTLN  104 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~~~~~~~~  104 (139)
                      +|.+||+|.++.+.|+.+.....
T Consensus       403 ~p~~R~tm~~i~~~l~~~~~~~~  425 (474)
T KOG0194|consen  403 DPEDRPTMSTIKKKLEALEKKKE  425 (474)
T ss_pred             ChhhccCHHHHHHHHHHHHhccc
Confidence            99999999999999998776443

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.09  E-value=3.8e-10  Score=80.50  Aligned_cols=80  Identities=15%  Similarity=0.209  Sum_probs=53.2

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|+++||+++|+.|+.....     ..............   .+    +......+..++..||..+|
T Consensus       181 ~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~~p  248 (263)
T cd06625         181 GEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA-----MAAIFKIATQPTNP---QL----PSHVSPDARNFLRRTFVENA  248 (263)
T ss_pred             cCCCCchhhhHHHHHHHHHHHhCCCCccccch-----HHHHHHHhccCCCC---CC----CccCCHHHHHHHHHHhhcCc
Confidence            34467899999999999999999998753211     11111111111111   11    22233378899999999999


Q ss_pred             CCCCCHHHHHHH
Q 047465           84 DDRPTVYDVVSM   95 (139)
Q Consensus        84 ~~Rps~~~v~~~   95 (139)
                      .+||++.+++..
T Consensus       249 ~~Rpt~~~ll~~  260 (263)
T cd06625         249 KKRPSAEELLRH  260 (263)
T ss_pred             ccCCCHHHHhhC
Confidence            999999998753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.09  E-value=2.4e-10  Score=82.67  Aligned_cols=80  Identities=15%  Similarity=0.272  Sum_probs=54.0

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++||||+|+++||+++|+.|+......     ..... .......   .+.+  +......+..++..||+.+|+
T Consensus       204 ~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~-----~~~~~-~~~~~~~---~~~~--~~~~~~~~~~li~~~l~~~p~  272 (286)
T cd06638         204 STYDARCDVWSLGITAIELGDGDPPLADLHPM-----RALFK-IPRNPPP---TLHQ--PELWSNEFNDFIRKCLTKDYE  272 (286)
T ss_pred             ccccchhhhhhHHHHHHHHhcCCCCCCCCchh-----HHHhh-ccccCCC---cccC--CCCcCHHHHHHHHHHccCCcc
Confidence            34678999999999999999999987532110     11111 1111111   2222  333344788999999999999


Q ss_pred             CCCCHHHHHHH
Q 047465           85 DRPTVYDVVSM   95 (139)
Q Consensus        85 ~Rps~~~v~~~   95 (139)
                      +||++.+++..
T Consensus       273 ~Rps~~ell~~  283 (286)
T cd06638         273 KRPTVSDLLQH  283 (286)
T ss_pred             cCCCHHHHhhc
Confidence            99999999764

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.09  E-value=3.7e-10  Score=80.93  Aligned_cols=83  Identities=20%  Similarity=0.263  Sum_probs=55.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++|+||||++++|+++ |..|+.....  ..    .......+...   ..    +......+.+++.+|++.+
T Consensus       177 ~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~--~~----~~~~~~~~~~~---~~----~~~~~~~l~~li~~~l~~~  243 (262)
T cd05071         177 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--RE----VLDQVERGYRM---PC----PPECPESLHDLMCQCWRKE  243 (262)
T ss_pred             cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh--HH----HHHHHhcCCCC---CC----ccccCHHHHHHHHHHccCC
Confidence            4567889999999999999999 6767643211  11    11111111111   11    1112237889999999999


Q ss_pred             CCCCCCHHHHHHHHhcc
Q 047465           83 ADDRPTVYDVVSMLTNE   99 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~   99 (139)
                      |++||++.+++..|+..
T Consensus       244 p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         244 PEERPTFEYLQAFLEDY  260 (262)
T ss_pred             cccCCCHHHHHHHHHHh
Confidence            99999999999998763

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.09  E-value=4e-10  Score=80.91  Aligned_cols=79  Identities=18%  Similarity=0.247  Sum_probs=51.4

Q ss_pred             CCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCC---CCHHHHHHHHHHhcccC
Q 047465            7 FSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHG---IYGRTTGHWTLLCAQES   82 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~---~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++|+||||+++||+++ |+.|++....  .......   ..... .   ...+  |.   .....+..++..|| .+
T Consensus       186 ~~~~~DiwslG~~l~el~~~g~~p~~~~~~--~~~~~~~---~~~~~-~---~~~~--~~~~~~~~~~~~~l~~~c~-~~  253 (269)
T cd05087         186 QTKESNVWSLGVTIWELFELGSQPYRHLSD--EQVLTYT---VREQQ-L---KLPK--PRLKLPLSDRWYEVMQFCW-LQ  253 (269)
T ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCh--HHHHHHH---hhccc-C---CCCC--CccCCCCChHHHHHHHHHh-cC
Confidence            5789999999999999996 8888854322  1111111   11111 1   1111  22   12236778999999 58


Q ss_pred             CCCCCCHHHHHHHHh
Q 047465           83 ADDRPTVYDVVSMLT   97 (139)
Q Consensus        83 p~~Rps~~~v~~~L~   97 (139)
                      |++||++.+++..|+
T Consensus       254 P~~Rpt~~~l~~~l~  268 (269)
T cd05087         254 PEQRPSAEEVHLLLS  268 (269)
T ss_pred             cccCCCHHHHHHHhc
Confidence            999999999998875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.08  E-value=3.4e-10  Score=81.70  Aligned_cols=85  Identities=20%  Similarity=0.242  Sum_probs=60.3

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .+.++.++|+||||++++|+++ |+.|+.....  ..+.    .....+..     ...  |......+..++..||..+
T Consensus       185 ~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~----~~~~~~~~-----~~~--~~~~~~~~~~~~~~~l~~~  251 (279)
T cd05057         185 HRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA--VEIP----DLLEKGER-----LPQ--PPICTIDVYMVLVKCWMID  251 (279)
T ss_pred             cCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH--HHHH----HHHhCCCC-----CCC--CCCCCHHHHHHHHHHcCCC
Confidence            3467789999999999999998 8888753221  1111    12222221     111  4444447889999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.+++..|+....
T Consensus       252 p~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05057         252 AESRPTFKELINEFSKMAR  270 (279)
T ss_pred             hhhCCCHHHHHHHHHHHHh
Confidence            9999999999999998755

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.08  E-value=3.4e-10  Score=81.80  Aligned_cols=78  Identities=17%  Similarity=0.138  Sum_probs=51.9

Q ss_pred             CCCCccchhhhHhHHHHHHH-hCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEIL-SGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ..++.++||||||+++||++ +|+.|+.....  .....    ......     ..    +......+.+++..||+.+|
T Consensus       196 ~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--~~~~~----~~~~~~-----~~----~~~~~~~~~~li~~cl~~~p  260 (274)
T cd05076         196 NSLSTAADKWSFGTTLLEICFDGEVPLKERTP--SEKER----FYEKKH-----RL----PEPSCKELATLISQCLTYEP  260 (274)
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCccccCh--HHHHH----HHHhcc-----CC----CCCCChHHHHHHHHHcccCh
Confidence            35788999999999999995 57777643211  11111    111111     11    11122378899999999999


Q ss_pred             CCCCCHHHHHHHHh
Q 047465           84 DDRPTVYDVVSMLT   97 (139)
Q Consensus        84 ~~Rps~~~v~~~L~   97 (139)
                      .+||++.+++..|.
T Consensus       261 ~~Rps~~~il~~L~  274 (274)
T cd05076         261 TQRPSFRTILRDLT  274 (274)
T ss_pred             hhCcCHHHHHHhhC
Confidence            99999999998874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.08  E-value=3.2e-10  Score=83.39  Aligned_cols=87  Identities=18%  Similarity=0.208  Sum_probs=59.3

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++|+||||+++||+++ |..|+.....  ..+.    .....+...   ..    +......+.+++.+||+.+
T Consensus       210 ~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~--~~~~----~~~~~~~~~---~~----~~~~~~~l~~li~~cl~~~  276 (314)
T cd05099         210 DRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV--EELF----KLLREGHRM---DK----PSNCTHELYMLMRECWHAV  276 (314)
T ss_pred             cCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH--HHHH----HHHHcCCCC---CC----CCCCCHHHHHHHHHHcCCC
Confidence            3557889999999999999998 7777643211  1111    112222211   11    2222337889999999999


Q ss_pred             CCCCCCHHHHHHHHhcccCCC
Q 047465           83 ADDRPTVYDVVSMLTNEATTL  103 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~~~  103 (139)
                      |.+||++.+++..|.+.....
T Consensus       277 p~~Rps~~~ll~~l~~~~~~~  297 (314)
T cd05099         277 PTQRPTFKQLVEALDKVLAAV  297 (314)
T ss_pred             cccCcCHHHHHHHHHHHHHHh
Confidence            999999999999998876533

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.08  E-value=2.5e-10  Score=82.21  Aligned_cols=89  Identities=20%  Similarity=0.237  Sum_probs=57.5

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchH---------HHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHH
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLI---------FVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHW   74 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l   74 (139)
                      +..++.++|+||||++++|+++|+.|+.........         ...............     ..  +......+.++
T Consensus       186 ~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~l  258 (284)
T cd05038         186 TSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERL-----PR--PPSCPDEVYDL  258 (284)
T ss_pred             cCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcC-----CC--CccCCHHHHHH
Confidence            345678899999999999999999886432111100         001111111111111     11  22223478899


Q ss_pred             HHHhcccCCCCCCCHHHHHHHHhcc
Q 047465           75 TLLCAQESADDRPTVYDVVSMLTNE   99 (139)
Q Consensus        75 ~~~C~~~~p~~Rps~~~v~~~L~~~   99 (139)
                      +.+||+.+|.+||++.+++.+|+++
T Consensus       259 i~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         259 MKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             HHHHhccChhhCCCHHHHHHHHhhc
Confidence            9999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.08  E-value=7.7e-10  Score=82.11  Aligned_cols=85  Identities=20%  Similarity=0.211  Sum_probs=58.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||||++++|+++ |..|+....     ..... .....+...   ..    +......+..++..||+.+
T Consensus       210 ~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~~~~~-~~~~~~~~~---~~----~~~~~~~l~~li~~cl~~~  276 (334)
T cd05100         210 DRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP-----VEELF-KLLKEGHRM---DK----PANCTHELYMIMRECWHAV  276 (334)
T ss_pred             cCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC-----HHHHH-HHHHcCCCC---CC----CCCCCHHHHHHHHHHcccC
Confidence            4457789999999999999998 677764321     11111 112222221   11    2223347889999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.+++..|++...
T Consensus       277 p~~Rps~~ell~~l~~~~~  295 (334)
T cd05100         277 PSQRPTFKQLVEDLDRVLT  295 (334)
T ss_pred             hhhCcCHHHHHHHHHHHhh
Confidence            9999999999999987764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.07  E-value=5e-10  Score=80.07  Aligned_cols=82  Identities=23%  Similarity=0.331  Sum_probs=56.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++|+||||++++++++ |+.|+....  .....    .....+...   ..    +......+.+++.+||+.+
T Consensus       177 ~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~--~~~~~----~~~~~~~~~---~~----~~~~~~~~~~~i~~~l~~~  243 (260)
T cd05073         177 FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--NPEVI----RALERGYRM---PR----PENCPEELYNIMMRCWKNR  243 (260)
T ss_pred             cCCcCccccchHHHHHHHHHHhcCCCCCCCCC--HHHHH----HHHhCCCCC---CC----cccCCHHHHHHHHHHcccC
Confidence            3456789999999999999998 787775321  11111    112222211   11    2222337889999999999


Q ss_pred             CCCCCCHHHHHHHHhc
Q 047465           83 ADDRPTVYDVVSMLTN   98 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~   98 (139)
                      |.+||++.++...|+.
T Consensus       244 p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         244 PEERPTFEYIQSVLDD  259 (260)
T ss_pred             cccCcCHHHHHHHHhc
Confidence            9999999999998875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.06  E-value=2.9e-10  Score=83.31  Aligned_cols=85  Identities=21%  Similarity=0.192  Sum_probs=57.3

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||||++++|+++ |..|+.....  .   ... .....+...   ..    +......+.+++.+||+.+
T Consensus       197 ~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~---~~~-~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~~  263 (303)
T cd05088         197 YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--A---ELY-EKLPQGYRL---EK----PLNCDDEVYDLMRQCWREK  263 (303)
T ss_pred             ccCCcccccchhhhhHHHHHHhcCCCCcccCCh--H---HHH-HHHhcCCcC---CC----CCCCCHHHHHHHHHHcCCC
Confidence            3456789999999999999998 8888742211  1   111 111111111   11    2222337889999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |++||++.+++..|+.+..
T Consensus       264 p~~Rp~~~~il~~l~~~~~  282 (303)
T cd05088         264 PYERPSFAQILVSLNRMLE  282 (303)
T ss_pred             hhhCcCHHHHHHHHHHHHH
Confidence            9999999999999886644

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.06  E-value=5.8e-10  Score=80.01  Aligned_cols=83  Identities=22%  Similarity=0.240  Sum_probs=56.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++|+||||++++|+++ |..|+.....  .....    .+..+...   .  .  +......+..++.+||+.+
T Consensus       183 ~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~--~~~~~----~~~~~~~~---~--~--~~~~~~~~~~li~~~l~~~  249 (267)
T cd05066         183 YRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN--QDVIK----AIEEGYRL---P--A--PMDCPAALHQLMLDCWQKD  249 (267)
T ss_pred             cCccCchhhhHHHHHHHHHHhcCCCCCcccCCH--HHHHH----HHhCCCcC---C--C--CCCCCHHHHHHHHHHcccC
Confidence            4567889999999999999886 8888743211  11111    11122111   1  0  2222337889999999999


Q ss_pred             CCCCCCHHHHHHHHhcc
Q 047465           83 ADDRPTVYDVVSMLTNE   99 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~   99 (139)
                      |.+||++.++++.|++.
T Consensus       250 p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         250 RNERPKFEQIVSILDKL  266 (267)
T ss_pred             chhCCCHHHHHHHHHhh
Confidence            99999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.06  E-value=3.7e-10  Score=81.63  Aligned_cols=79  Identities=15%  Similarity=0.228  Sum_probs=52.3

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++|+||||+++||+++|+.|+.....     ...+.... .....   ....  +......+.+++..||+.+|.
T Consensus       183 ~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-----~~~~~~~~-~~~~~---~~~~--~~~~~~~~~~li~~~l~~~p~  251 (282)
T cd06643         183 RPYDYKADVWSLGITLIEMAQIEPPHHELNP-----MRVLLKIA-KSEPP---TLAQ--PSRWSSEFKDFLKKCLEKNVD  251 (282)
T ss_pred             CCCCccchhhhHHHHHHHHccCCCCccccCH-----HHHHHHHh-hcCCC---CCCC--ccccCHHHHHHHHHHccCChh
Confidence            3466799999999999999999988753221     11111111 11111   1112  332334789999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       252 ~Rp~~~~il~  261 (282)
T cd06643         252 ARWTTTQLLQ  261 (282)
T ss_pred             hCcCHHHHhc
Confidence            9999998854

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.06  E-value=6.5e-10  Score=79.72  Aligned_cols=78  Identities=15%  Similarity=0.244  Sum_probs=51.8

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++|+||+|+++||+++|+.|+......    .. ..... .....   ...   +......+.+++.+||..+|.
T Consensus       191 ~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~----~~-~~~~~-~~~~~---~~~---~~~~~~~~~~li~~~l~~~p~  258 (272)
T cd06637         191 ATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM----RA-LFLIP-RNPAP---RLK---SKKWSKKFQSFIESCLVKNHS  258 (272)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCccccCHH----HH-HHHHh-cCCCC---CCC---CCCcCHHHHHHHHHHcCCChh
Confidence            35778999999999999999999988532211    01 11111 11111   111   122233788999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       259 ~Rpt~~~il~  268 (272)
T cd06637         259 QRPTTEQLMK  268 (272)
T ss_pred             hCCCHHHHhh
Confidence            9999998864

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.05  E-value=4.5e-10  Score=81.00  Aligned_cols=79  Identities=18%  Similarity=0.311  Sum_probs=52.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++|+||||++++|+++|+.|+......  .   .. .....+...   .+    +......+.+++..||+.+|
T Consensus       175 ~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--~---~~-~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~~p  241 (277)
T cd06642         175 QSAYDFKADIWSLGITAIELAKGEPPNSDLHPM--R---VL-FLIPKNSPP---TL----EGQYSKPFKEFVEACLNKDP  241 (277)
T ss_pred             cCCCchhhhHHHHHHHHHHHHhCCCCCcccchh--h---HH-hhhhcCCCC---CC----CcccCHHHHHHHHHHccCCc
Confidence            445788999999999999999999987532211  1   01 111111111   11    11112268889999999999


Q ss_pred             CCCCCHHHHHHH
Q 047465           84 DDRPTVYDVVSM   95 (139)
Q Consensus        84 ~~Rps~~~v~~~   95 (139)
                      .+||++.+++..
T Consensus       242 ~~Rp~~~~il~~  253 (277)
T cd06642         242 RFRPTAKELLKH  253 (277)
T ss_pred             ccCcCHHHHHHh
Confidence            999999999873

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.05  E-value=4.8e-10  Score=80.64  Aligned_cols=79  Identities=15%  Similarity=0.284  Sum_probs=52.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++|||+||+++|++++|+.|+......     ... .........   .+..  .. ....+.+++.+||..+|
T Consensus       172 ~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~-----~~~-~~~~~~~~~---~~~~--~~-~~~~~~~~l~~~l~~~p  239 (274)
T cd06609         172 QSGYDEKADIWSLGITAIELAKGEPPLSDLHPM-----RVL-FLIPKNNPP---SLEG--NK-FSKPFKDFVSLCLNKDP  239 (274)
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCcccCchH-----HHH-HHhhhcCCC---CCcc--cc-cCHHHHHHHHHHhhCCh
Confidence            345788999999999999999999998533211     111 111112211   1111  11 22368889999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      ++||++.+++.
T Consensus       240 ~~Rpt~~~il~  250 (274)
T cd06609         240 KERPSAKELLK  250 (274)
T ss_pred             hhCcCHHHHhh
Confidence            99999999975

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.04  E-value=6.4e-10  Score=80.75  Aligned_cols=85  Identities=22%  Similarity=0.331  Sum_probs=57.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++|+||||++++|+++ +..|+....  .....    .....+...   ..    +......+.+++..|++.+
T Consensus       195 ~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~--~~~~~----~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~~  261 (288)
T cd05061         195 DGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS--NEQVL----KFVMDGGYL---DQ----PDNCPERVTDLMRMCWQFN  261 (288)
T ss_pred             cCCCChHhHHHHHHHHHHHHHhCCCCCCCCCC--HHHHH----HHHHcCCCC---CC----CCCCCHHHHHHHHHHcCCC
Confidence            4567889999999999999998 566664221  11111    111112111   11    2222347899999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |++||++.+++..|++...
T Consensus       262 p~~Rps~~~ll~~l~~~~~  280 (288)
T cd05061         262 PKMRPTFLEIVNLLKDDLH  280 (288)
T ss_pred             hhHCcCHHHHHHHHHhhcC
Confidence            9999999999999988654

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.04  E-value=7.5e-10  Score=78.95  Aligned_cols=82  Identities=23%  Similarity=0.293  Sum_probs=56.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++|+||+|++++++++ |+.|+.....  ....    ..+..+...   ..    +......+.+++.+|++.+
T Consensus       178 ~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--~~~~----~~~~~~~~~---~~----~~~~~~~~~~~i~~~l~~~  244 (261)
T cd05034         178 YGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN--REVL----EQVERGYRM---PR----PPNCPEELYDLMLQCWDKD  244 (261)
T ss_pred             cCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHH----HHHHcCCCC---CC----CCCCCHHHHHHHHHHcccC
Confidence            4557889999999999999998 8888743211  1111    111111111   11    2222347899999999999


Q ss_pred             CCCCCCHHHHHHHHhc
Q 047465           83 ADDRPTVYDVVSMLTN   98 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~   98 (139)
                      |.+||++.++...|+.
T Consensus       245 p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         245 PEERPTFEYLQSFLED  260 (261)
T ss_pred             cccCCCHHHHHHHHhc
Confidence            9999999999998875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.04  E-value=5.6e-10  Score=81.05  Aligned_cols=77  Identities=17%  Similarity=0.308  Sum_probs=51.3

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDR   86 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~R   86 (139)
                      ++.++|+||||+++||+++|+.|+.....     ...... .......   .+.+  +......+.+++.+||+.+|.+|
T Consensus       210 ~~~~~Di~slGvi~~el~~g~~p~~~~~~-----~~~~~~-~~~~~~~---~~~~--~~~~~~~l~~li~~~l~~~p~~R  278 (291)
T cd06639         210 YDARCDVWSLGITAIELGDGDPPLFDMHP-----VKTLFK-IPRNPPP---TLLH--PEKWCRSFNHFISQCLIKDFEAR  278 (291)
T ss_pred             cCCccchHHHHHHHHHHhhCCCCCCCCcH-----HHHHHH-HhcCCCC---CCCc--ccccCHHHHHHHHHHhhcChhhC
Confidence            57899999999999999999998853221     111111 1111111   2212  22222368889999999999999


Q ss_pred             CCHHHHHH
Q 047465           87 PTVYDVVS   94 (139)
Q Consensus        87 ps~~~v~~   94 (139)
                      |++.++++
T Consensus       279 ps~~~il~  286 (291)
T cd06639         279 PSVTHLLE  286 (291)
T ss_pred             cCHHHHhc
Confidence            99999875

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.04  E-value=7.1e-10  Score=79.60  Aligned_cols=85  Identities=20%  Similarity=0.114  Sum_probs=58.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ...++.++||||||++++|+++ |..||.....  ...   . .....+...   ..    +......+.+++.+|+..+
T Consensus       182 ~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~--~~~---~-~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~~  248 (270)
T cd05056         182 FRRFTSASDVWMFGVCMWEILMLGVKPFQGVKN--NDV---I-GRIENGERL---PM----PPNCPPTLYSLMTKCWAYD  248 (270)
T ss_pred             cCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH--HHH---H-HHHHcCCcC---CC----CCCCCHHHHHHHHHHcCCC
Confidence            3457789999999999999986 8888753221  111   1 112222221   11    2222337889999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.+++..|++...
T Consensus       249 P~~Rpt~~~~~~~l~~~~~  267 (270)
T cd05056         249 PSKRPRFTELKAQLSDILQ  267 (270)
T ss_pred             hhhCcCHHHHHHHHHHHHh
Confidence            9999999999999987543

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.04  E-value=6.6e-10  Score=80.15  Aligned_cols=78  Identities=18%  Similarity=0.274  Sum_probs=52.8

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      .++.++|+||+|+++|++++|+.|+.....     ...... ...+...   .+..  +......+.+++..||+.+|.+
T Consensus       184 ~~~~~sDi~slG~il~~l~~g~~p~~~~~~-----~~~~~~-~~~~~~~---~~~~--~~~~~~~~~~li~~~l~~~p~~  252 (280)
T cd06611         184 PYDYKADIWSLGITLIELAQMEPPHHELNP-----MRVLLK-ILKSEPP---TLDQ--PSKWSSSFNDFLKSCLVKDPDD  252 (280)
T ss_pred             CCCccccHHHHHHHHHHHHhCCCCcccCCH-----HHHHHH-HhcCCCC---CcCC--cccCCHHHHHHHHHHhccChhh
Confidence            467789999999999999999998853221     111111 1112111   1111  3333347889999999999999


Q ss_pred             CCCHHHHHH
Q 047465           86 RPTVYDVVS   94 (139)
Q Consensus        86 Rps~~~v~~   94 (139)
                      ||++.++++
T Consensus       253 Rps~~~il~  261 (280)
T cd06611         253 RPTAAELLK  261 (280)
T ss_pred             CcCHHHHhc
Confidence            999999875

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.03  E-value=7e-10  Score=81.10  Aligned_cols=80  Identities=15%  Similarity=0.170  Sum_probs=53.0

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ++.++.++|+||||+++|++++|+.|+......     ....... .....   .+..  +......+.+++.+||..+|
T Consensus       189 ~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~-----~~~~~~~-~~~~~---~~~~--~~~~~~~~~~li~~~l~~dp  257 (296)
T cd06655         189 RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL-----RALYLIA-TNGTP---ELQN--PEKLSPIFRDFLNRCLEMDV  257 (296)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHH-hcCCc---ccCC--cccCCHHHHHHHHHHhhcCh
Confidence            345778999999999999999999998532211     1111111 11111   1111  22223367889999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       258 ~~Rpt~~~il~  268 (296)
T cd06655         258 EKRGSAKELLQ  268 (296)
T ss_pred             hhCCCHHHHhh
Confidence            99999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.03  E-value=5.9e-10  Score=80.45  Aligned_cols=79  Identities=16%  Similarity=0.272  Sum_probs=52.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++|+||||++++|+++|..|+......  .   .. .........   .+    +......+.+++..||+.+|
T Consensus       175 ~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--~---~~-~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~~p  241 (277)
T cd06640         175 QSAYDSKADIWSLGITAIELAKGEPPNSDMHPM--R---VL-FLIPKNNPP---TL----TGEFSKPFKEFIDACLNKDP  241 (277)
T ss_pred             cCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH--h---Hh-hhhhcCCCC---CC----chhhhHHHHHHHHHHcccCc
Confidence            456788999999999999999999987532211  0   01 111111111   11    11112378899999999999


Q ss_pred             CCCCCHHHHHHH
Q 047465           84 DDRPTVYDVVSM   95 (139)
Q Consensus        84 ~~Rps~~~v~~~   95 (139)
                      .+||++.+++..
T Consensus       242 ~~Rp~~~~il~~  253 (277)
T cd06640         242 SFRPTAKELLKH  253 (277)
T ss_pred             ccCcCHHHHHhC
Confidence            999999999754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.03  E-value=8.6e-10  Score=78.45  Aligned_cols=79  Identities=19%  Similarity=0.250  Sum_probs=54.1

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .++.++.++|+||||++++++++|+.|+....     ....+..... +...   ..    +......+..++.+||+.+
T Consensus       174 ~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-----~~~~~~~~~~-~~~~---~~----~~~~~~~~~~li~~~l~~~  240 (256)
T cd08218         174 ENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN-----MKNLVLKIIR-GSYP---PV----SSHYSYDLRNLVSQLFKRN  240 (256)
T ss_pred             CCCCCCCccchhHHHHHHHHHHcCCCCccCCC-----HHHHHHHHhc-CCCC---CC----cccCCHHHHHHHHHHhhCC
Confidence            34567889999999999999999998875321     1122222221 1211   11    2222337889999999999


Q ss_pred             CCCCCCHHHHHH
Q 047465           83 ADDRPTVYDVVS   94 (139)
Q Consensus        83 p~~Rps~~~v~~   94 (139)
                      |.+||++.+++.
T Consensus       241 p~~Rp~~~~vl~  252 (256)
T cd08218         241 PRDRPSVNSILE  252 (256)
T ss_pred             hhhCcCHHHHhh
Confidence            999999999976

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.03  E-value=8.4e-10  Score=80.21  Aligned_cols=78  Identities=14%  Similarity=0.221  Sum_probs=51.4

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      .++.++|+||||+++||+++|+.|+.....     ........ .....   ....  +......+.+++.+||..+|++
T Consensus       191 ~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----~~~~~~~~-~~~~~---~~~~--~~~~~~~~~~li~~~l~~~p~~  259 (292)
T cd06644         191 PYDYKADIWSLGITLIEMAQIEPPHHELNP-----MRVLLKIA-KSEPP---TLSQ--PSKWSMEFRDFLKTALDKHPET  259 (292)
T ss_pred             CCCchhhhHhHHHHHHHHhcCCCCCccccH-----HHHHHHHh-cCCCc---cCCC--CcccCHHHHHHHHHHhcCCccc
Confidence            357789999999999999999988743211     11111111 11111   1111  2222237888999999999999


Q ss_pred             CCCHHHHHH
Q 047465           86 RPTVYDVVS   94 (139)
Q Consensus        86 Rps~~~v~~   94 (139)
                      ||++.+++.
T Consensus       260 Rp~~~~il~  268 (292)
T cd06644         260 RPSAAQLLE  268 (292)
T ss_pred             CcCHHHHhc
Confidence            999998865

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.02  E-value=6.4e-10  Score=79.54  Aligned_cols=78  Identities=14%  Similarity=0.247  Sum_probs=51.3

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      .++.++||||+|++++++++|+.|+..... .    ..... .......   .+..  +......+.+++.+||..+|.+
T Consensus       194 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~----~~~~~-~~~~~~~---~~~~--~~~~~~~~~~li~~~l~~dp~~  262 (275)
T cd06608         194 SYDARSDVWSLGITAIELADGKPPLCDMHP-M----RALFK-IPRNPPP---TLKS--PENWSKKFNDFISECLIKNYEQ  262 (275)
T ss_pred             CccccccHHHhHHHHHHHHhCCCCccccch-H----HHHHH-hhccCCC---CCCc--hhhcCHHHHHHHHHHhhcChhh
Confidence            356789999999999999999999853211 1    11111 1111111   1111  2212237889999999999999


Q ss_pred             CCCHHHHHH
Q 047465           86 RPTVYDVVS   94 (139)
Q Consensus        86 Rps~~~v~~   94 (139)
                      ||++.+++.
T Consensus       263 Rpt~~~ll~  271 (275)
T cd06608         263 RPFMEELLE  271 (275)
T ss_pred             CcCHHHHhc
Confidence            999999875

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.02  E-value=9.2e-10  Score=78.12  Aligned_cols=78  Identities=22%  Similarity=0.290  Sum_probs=52.6

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++||||||+++|++++|+.++.....     ...+..... +...   .+    +......+..++..||+.+|.
T Consensus       176 ~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~-----~~~~~~~~~-~~~~---~~----~~~~~~~l~~li~~~l~~~p~  242 (256)
T cd08220         176 KPYNQKSDIWALGCVLYELASLKRAFEAANL-----PALVLKIMS-GTFA---PI----SDRYSPDLRQLILSMLNLDPS  242 (256)
T ss_pred             CCCCcccchHHHHHHHHHHHhCCCCcccCch-----HHHHHHHHh-cCCC---CC----CCCcCHHHHHHHHHHccCChh
Confidence            4567899999999999999999998853221     111211111 1111   11    111223788999999999999


Q ss_pred             CCCCHHHHHHH
Q 047465           85 DRPTVYDVVSM   95 (139)
Q Consensus        85 ~Rps~~~v~~~   95 (139)
                      +||++.+++..
T Consensus       243 ~Rpt~~~ll~~  253 (256)
T cd08220         243 KRPQLSQIMAQ  253 (256)
T ss_pred             hCCCHHHHhhC
Confidence            99999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.02  E-value=6.1e-10  Score=83.35  Aligned_cols=77  Identities=18%  Similarity=0.182  Sum_probs=50.4

Q ss_pred             CccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCCC
Q 047465            8 SIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRP   87 (139)
Q Consensus         8 s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~Rp   87 (139)
                      +.++|||||||++||+++|+.||......  .......... .....   ..    +......+.+++..||+.+|.+||
T Consensus       251 ~~~~DvwslGvil~el~~g~~pf~~~~~~--~~~~~~~~~~-~~~~~---~~----~~~~~~~l~~li~~~l~~~P~~Rp  320 (353)
T PLN00034        251 GYAGDIWSLGVSILEFYLGRFPFGVGRQG--DWASLMCAIC-MSQPP---EA----PATASREFRHFISCCLQREPAKRW  320 (353)
T ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCCCCc--cHHHHHHHHh-ccCCC---CC----CCccCHHHHHHHHHHccCChhhCc
Confidence            45899999999999999999998622111  1111111111 11111   11    222233789999999999999999


Q ss_pred             CHHHHHH
Q 047465           88 TVYDVVS   94 (139)
Q Consensus        88 s~~~v~~   94 (139)
                      ++.+++.
T Consensus       321 t~~ell~  327 (353)
T PLN00034        321 SAMQLLQ  327 (353)
T ss_pred             CHHHHhc
Confidence            9999976

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.01  E-value=7.2e-10  Score=78.70  Aligned_cols=78  Identities=22%  Similarity=0.304  Sum_probs=53.0

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ++.++.++|+||||++++|+++|+.|+....     ......... .+...   .. .  +. ....+.+++.+||+.+|
T Consensus       176 ~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~-~~~~~---~~-~--~~-~~~~~~~~i~~~l~~~p  242 (257)
T cd08225         176 NRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-----LHQLVLKIC-QGYFA---PI-S--PN-FSRDLRSLISQLFKVSP  242 (257)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHh-cccCC---CC-C--CC-CCHHHHHHHHHHhccCh
Confidence            3457789999999999999999999875321     112222222 11111   11 1  21 22378899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      ++||++.+++.
T Consensus       243 ~~Rpt~~~ll~  253 (257)
T cd08225         243 RDRPSITSILK  253 (257)
T ss_pred             hhCcCHHHHhh
Confidence            99999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.01  E-value=1.1e-09  Score=77.51  Aligned_cols=80  Identities=28%  Similarity=0.343  Sum_probs=55.1

Q ss_pred             CCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ..++.++||||+|++++|+++ |..|+....  .....    .....+...   .  .  +......+..++..||..+|
T Consensus       182 ~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--~~~~~----~~~~~~~~~---~--~--~~~~~~~~~~li~~~l~~~p  248 (262)
T cd00192         182 GIFTSKSDVWSFGVLLWEIFTLGATPYPGLS--NEEVL----EYLRKGYRL---P--K--PEYCPDELYELMLSCWQLDP  248 (262)
T ss_pred             CCcchhhccHHHHHHHHHHHhcCCCCCCCCC--HHHHH----HHHHcCCCC---C--C--CccCChHHHHHHHHHccCCc
Confidence            357789999999999999998 588875431  11111    112112211   1  1  33333488899999999999


Q ss_pred             CCCCCHHHHHHHHh
Q 047465           84 DDRPTVYDVVSMLT   97 (139)
Q Consensus        84 ~~Rps~~~v~~~L~   97 (139)
                      .+||++.+++..|+
T Consensus       249 ~~Rps~~~l~~~l~  262 (262)
T cd00192         249 EDRPTFSELVERLE  262 (262)
T ss_pred             ccCcCHHHHHHhhC
Confidence            99999999998874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.01  E-value=4.2e-10  Score=87.06  Aligned_cols=80  Identities=15%  Similarity=0.176  Sum_probs=58.1

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..|..|+||||+|++.+||+.|+.||..  +   ..+. +...+.....+   ++-.  +......+.++..+|++.|+.
T Consensus       444 k~YG~KVDIWSLGIMaIEMveGEPPYln--E---~Plr-AlyLIa~ng~P---~lk~--~~klS~~~kdFL~~cL~~dv~  512 (550)
T KOG0578|consen  444 KPYGPKVDIWSLGIMAIEMVEGEPPYLN--E---NPLR-ALYLIATNGTP---KLKN--PEKLSPELKDFLDRCLVVDVE  512 (550)
T ss_pred             cccCccccchhhhhHHHHHhcCCCCccC--C---ChHH-HHHHHhhcCCC---CcCC--ccccCHHHHHHHHHHhhcchh
Confidence            4588999999999999999999999842  1   1111 22223333333   4433  555555899999999999999


Q ss_pred             CCCCHHHHHHH
Q 047465           85 DRPTVYDVVSM   95 (139)
Q Consensus        85 ~Rps~~~v~~~   95 (139)
                      +|+++.+++..
T Consensus       513 ~RasA~eLL~H  523 (550)
T KOG0578|consen  513 QRASAKELLEH  523 (550)
T ss_pred             cCCCHHHHhcC
Confidence            99999999763

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.01  E-value=8.6e-10  Score=80.57  Aligned_cols=80  Identities=16%  Similarity=0.223  Sum_probs=52.2

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||||++++++++|+.||..... ....   . .... ....   .+..  +......+.+++.+||..+|
T Consensus       190 ~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~-~~~~---~-~~~~-~~~~---~~~~--~~~~~~~l~~li~~~l~~~p  258 (296)
T cd06654         190 RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP-LRAL---Y-LIAT-NGTP---ELQN--PEKLSAIFRDFLNRCLDMDV  258 (296)
T ss_pred             CCCCCccchHHHHHHHHHHHHhCCCCCCCCCH-HHhH---H-HHhc-CCCC---CCCC--ccccCHHHHHHHHHHCcCCc
Confidence            34567899999999999999999999853221 1111   1 1111 1111   1111  21112267889999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       259 ~~Rpt~~eil~  269 (296)
T cd06654         259 EKRGSAKELLQ  269 (296)
T ss_pred             ccCcCHHHHhh
Confidence            99999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.01  E-value=1.4e-09  Score=78.60  Aligned_cols=89  Identities=16%  Similarity=0.173  Sum_probs=55.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCc----------hHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHH
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDS----------LIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGH   73 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~   73 (139)
                      ++.++.++|+||||++++|++++..+........          .................     ..  +......+.+
T Consensus       185 ~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~  257 (284)
T cd05081         185 ESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRL-----PA--PPGCPAEIYA  257 (284)
T ss_pred             cCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcC-----CC--CCCCCHHHHH
Confidence            3567889999999999999999866542111000          00000000111111111     00  2222337889


Q ss_pred             HHHHhcccCCCCCCCHHHHHHHHhcc
Q 047465           74 WTLLCAQESADDRPTVYDVVSMLTNE   99 (139)
Q Consensus        74 l~~~C~~~~p~~Rps~~~v~~~L~~~   99 (139)
                      ++.+||+.+|.+||++.+++..|+.+
T Consensus       258 li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         258 IMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             HHHHHccCChhhCCCHHHHHHHHHhc
Confidence            99999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.00  E-value=1.1e-09  Score=77.80  Aligned_cols=78  Identities=21%  Similarity=0.188  Sum_probs=53.3

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++|+|+||++++++++|+.|+.....  ..    .......+...   .+    +......+.+++..|++.+|+
T Consensus       185 ~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~----~~~~~~~~~~~---~~----~~~~~~~~~~l~~~~l~~~p~  251 (265)
T cd08217         185 MSYDEKSDIWSLGCLIYELCALSPPFTARNQ--LQ----LASKIKEGKFR---RI----PYRYSSELNEVIKSMLNVDPD  251 (265)
T ss_pred             CCCCchhHHHHHHHHHHHHHHCCCcccCcCH--HH----HHHHHhcCCCC---CC----ccccCHHHHHHHHHHccCCcc
Confidence            4567889999999999999999999864321  11    11112222222   11    212223788999999999999


Q ss_pred             CCCCHHHHHHH
Q 047465           85 DRPTVYDVVSM   95 (139)
Q Consensus        85 ~Rps~~~v~~~   95 (139)
                      +||++.++++.
T Consensus       252 ~Rp~~~~il~~  262 (265)
T cd08217         252 KRPSTEELLQL  262 (265)
T ss_pred             cCCCHHHHhhC
Confidence            99999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.00  E-value=1.6e-09  Score=77.88  Aligned_cols=79  Identities=18%  Similarity=0.231  Sum_probs=49.6

Q ss_pred             CCccchhhhHhHHHHHHHhC-CCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCC---CHHHHHHHHHHhcccC
Q 047465            7 FSIKSDIFSLGVLMLEILSG-KKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGI---YGRTTGHWTLLCAQES   82 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~---~~~~~~~l~~~C~~~~   82 (139)
                      ++.++||||||+++||++++ ..|+....  ..   ........... .   .+.+  |.+   ....+.+++..|| .+
T Consensus       185 ~~~~~DiwslG~~l~el~~~~~~p~~~~~--~~---~~~~~~~~~~~-~---~~~~--~~~~~~~~~~~~~l~~~c~-~~  252 (268)
T cd05086         185 QTKPSNVWALGVTLWELFENAAQPYSHLS--DR---EVLNHVIKDQQ-V---KLFK--PQLELPYSERWYEVLQFCW-LS  252 (268)
T ss_pred             CCCcchhHHHHHHHHHHHhCCCCCCCCCC--HH---HHHHHHHhhcc-c---ccCC--CccCCCCcHHHHHHHHHHh-hC
Confidence            46789999999999999975 44553221  11   11111111111 1   2222  222   2237788899999 67


Q ss_pred             CCCCCCHHHHHHHHh
Q 047465           83 ADDRPTVYDVVSMLT   97 (139)
Q Consensus        83 p~~Rps~~~v~~~L~   97 (139)
                      |++||++.++++.|.
T Consensus       253 P~~Rp~~~~i~~~l~  267 (268)
T cd05086         253 PEKRATAEEVHRLLT  267 (268)
T ss_pred             cccCCCHHHHHHHhc
Confidence            999999999988874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.00  E-value=1.2e-09  Score=80.05  Aligned_cols=79  Identities=18%  Similarity=0.243  Sum_probs=52.0

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +.++.++||||||+++||+++|+.|+.....     ........ .....   .+ .  +......+.+++.+||+.+|.
T Consensus       189 ~~~~~~sDv~s~G~il~el~tg~~p~~~~~~-----~~~~~~~~-~~~~~---~~-~--~~~~~~~~~~li~~~l~~~p~  256 (307)
T cd06607         189 GQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSALYHIA-QNDSP---TL-S--SNDWSDYFRNFVDSCLQKIPQ  256 (307)
T ss_pred             CCCCcccchHHHHHHHHHHHcCCCCCCCccH-----HHHHHHHh-cCCCC---CC-C--chhhCHHHHHHHHHHhcCChh
Confidence            4578899999999999999999988742211     11111111 11111   11 1  111223788999999999999


Q ss_pred             CCCCHHHHHHH
Q 047465           85 DRPTVYDVVSM   95 (139)
Q Consensus        85 ~Rps~~~v~~~   95 (139)
                      +||++.+++..
T Consensus       257 ~Rp~~~~il~~  267 (307)
T cd06607         257 DRPSSEELLKH  267 (307)
T ss_pred             hCcCHHHHhcC
Confidence            99999999753

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.00  E-value=1.3e-09  Score=78.12  Aligned_cols=80  Identities=23%  Similarity=0.230  Sum_probs=50.7

Q ss_pred             CCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCC---CCHHHHHHHHHHhccc
Q 047465            6 VFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHG---IYGRTTGHWTLLCAQE   81 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~---~~~~~~~~l~~~C~~~   81 (139)
                      .++.++||||+|+++||+++ |..|+.....  ...   ......... .   .+.+  +.   .....+..++..|| .
T Consensus       185 ~~~~~~DiwslG~~l~el~~~~~~p~~~~~~--~~~---~~~~~~~~~-~---~~~~--~~~~~~~~~~~~~~~~~~~-~  252 (269)
T cd05042         185 DQTKKSNIWSLGVTMWELFTAADQPYPDLSD--EQV---LKQVVREQD-I---KLPK--PQLDLKYSDRWYEVMQFCW-L  252 (269)
T ss_pred             ccchhhHHHHHHHHHHHHHhCCCCCCCcCCH--HHH---HHHHhhccC-c---cCCC--CcccccCCHHHHHHHHHHh-c
Confidence            46789999999999999998 6666643211  111   111111111 1   1111  21   22236677888999 5


Q ss_pred             CCCCCCCHHHHHHHHh
Q 047465           82 SADDRPTVYDVVSMLT   97 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~   97 (139)
                      +|++||++++|+..|.
T Consensus       253 dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         253 DPETRPTAEEVHELLT  268 (269)
T ss_pred             CcccccCHHHHHHHhc
Confidence            9999999999998764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.00  E-value=5.7e-10  Score=79.40  Aligned_cols=78  Identities=18%  Similarity=0.210  Sum_probs=52.8

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++|+||||++++++++|+.|+....     ....... ...+...   .+    +......+..++.+||+.+|.
T Consensus       175 ~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~-----~~~~~~~-~~~~~~~---~~----~~~~~~~~~~li~~~l~~~P~  241 (255)
T cd08219         175 MPYNNKSDIWSLGCILYELCTLKHPFQANS-----WKNLILK-VCQGSYK---PL----PSHYSYELRSLIKQMFKRNPR  241 (255)
T ss_pred             CCcCchhhhhhhchhheehhhccCCCCCCC-----HHHHHHH-HhcCCCC---CC----CcccCHHHHHHHHHHHhCCcc
Confidence            346789999999999999999999985321     1111111 1122222   11    222223678899999999999


Q ss_pred             CCCCHHHHHHH
Q 047465           85 DRPTVYDVVSM   95 (139)
Q Consensus        85 ~Rps~~~v~~~   95 (139)
                      +||++.+++..
T Consensus       242 ~Rp~~~~il~~  252 (255)
T cd08219         242 SRPSATTILSR  252 (255)
T ss_pred             cCCCHHHHhhc
Confidence            99999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=98.99  E-value=1.6e-09  Score=80.44  Aligned_cols=30  Identities=27%  Similarity=0.463  Sum_probs=26.0

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEF   32 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~   32 (139)
                      .+..++.++||||+|+++||+++|+.|+..
T Consensus       175 ~~~~~~~~~DiwslG~il~el~tg~~p~~~  204 (331)
T cd06649         175 QGTHYSVQSDIWSMGLSLVELAIGRYPIPP  204 (331)
T ss_pred             cCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence            345688999999999999999999999853

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.99  E-value=9.8e-10  Score=79.47  Aligned_cols=84  Identities=18%  Similarity=0.224  Sum_probs=59.1

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +...|+.|+||||+||+++||+..+.||-.     .++.. ....+.++..+   ++.+   .....++.+++..|+..|
T Consensus       201 ~~~~Y~~kSDiWslGCllyEMcaL~~PF~g-----~n~~~-L~~KI~qgd~~---~~p~---~~YS~~l~~li~~ci~vd  268 (375)
T KOG0591|consen  201 HESGYNFKSDIWSLGCLLYEMCALQSPFYG-----DNLLS-LCKKIEQGDYP---PLPD---EHYSTDLRELINMCIAVD  268 (375)
T ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCCCccc-----ccHHH-HHHHHHcCCCC---CCcH---HHhhhHHHHHHHHHccCC
Confidence            456799999999999999999999999842     23333 23345555554   3321   222338889999999999


Q ss_pred             CCCCCCHHHHHHHHhc
Q 047465           83 ADDRPTVYDVVSMLTN   98 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~   98 (139)
                      ++.||+...++..+..
T Consensus       269 ~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  269 PEQRPDTVPYVQDIQS  284 (375)
T ss_pred             cccCCCcchHHHHHHH
Confidence            9999996555555544

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=98.99  E-value=1.7e-09  Score=77.25  Aligned_cols=84  Identities=18%  Similarity=0.251  Sum_probs=53.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++|+||+|++++++++|+.|+.................. .....   .+.   .......+..++..||..+|
T Consensus       173 ~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~---~~~---~~~~~~~~~~li~~~l~~~p  245 (265)
T cd06605         173 GNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIV-NEPPP---RLP---SGKFSPDFQDFVNLCLIKDP  245 (265)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHh-cCCCC---CCC---hhhcCHHHHHHHHHHcCCCc
Confidence            446788999999999999999999988533211111122222111 11111   110   11122378899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       246 ~~Rpt~~~ll~  256 (265)
T cd06605         246 RERPSYKELLE  256 (265)
T ss_pred             hhCcCHHHHhh
Confidence            99999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.99  E-value=1.3e-09  Score=79.45  Aligned_cols=80  Identities=15%  Similarity=0.248  Sum_probs=52.1

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      .++.++|+||||++++++++|+.|+.....   . ......... ....   .+..  .......+.+++.+||+.+|.+
T Consensus       194 ~~~~~~Di~slG~il~el~~g~~p~~~~~~---~-~~~~~~~~~-~~~~---~~~~--~~~~~~~l~~li~~~l~~~p~~  263 (296)
T cd06618         194 KYDIRADVWSLGISLVELATGQFPYKNCKT---E-FEVLTKILQ-EEPP---SLPP--NEGFSPDFCSFVDLCLTKDHRK  263 (296)
T ss_pred             ccccchhHHHHHHHHHHHHhCCCCCCcchh---H-HHHHHHHhc-CCCC---CCCC--CCCCCHHHHHHHHHHccCChhh
Confidence            367899999999999999999999853211   1 111111111 1111   1111  1112337889999999999999


Q ss_pred             CCCHHHHHHH
Q 047465           86 RPTVYDVVSM   95 (139)
Q Consensus        86 Rps~~~v~~~   95 (139)
                      ||++.+++..
T Consensus       264 Rp~~~~il~~  273 (296)
T cd06618         264 RPKYRELLQH  273 (296)
T ss_pred             CCCHHHHhcC
Confidence            9999998753

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=98.99  E-value=1.2e-09  Score=78.93  Aligned_cols=84  Identities=17%  Similarity=0.304  Sum_probs=52.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCc--hHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDS--LIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      +..++.++|+||||+++|++++|+.|+.......  ....... .........   .+.   .......+.+++.+||+.
T Consensus       167 ~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~---~~~~~~~~~~li~~~l~~  239 (279)
T cd06619         167 GEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLL-QCIVDEDPP---VLP---VGQFSEKFVHFITQCMRK  239 (279)
T ss_pred             CCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHH-HHHhccCCC---CCC---CCcCCHHHHHHHHHHhhC
Confidence            4457889999999999999999999985322211  1011111 111111111   110   111223788999999999


Q ss_pred             CCCCCCCHHHHHH
Q 047465           82 SADDRPTVYDVVS   94 (139)
Q Consensus        82 ~p~~Rps~~~v~~   94 (139)
                      +|++||++.+++.
T Consensus       240 ~P~~Rp~~~eil~  252 (279)
T cd06619         240 QPKERPAPENLMD  252 (279)
T ss_pred             ChhhCCCHHHHhc
Confidence            9999999999865

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=98.99  E-value=1.1e-09  Score=85.82  Aligned_cols=79  Identities=19%  Similarity=0.206  Sum_probs=54.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||||+++||+++|+.||...     .......... .+...   .+    |......+..++..||+.+|
T Consensus       219 ~~~~s~k~DVwSlGvilyeLltG~~Pf~~~-----~~~~~~~~~~-~~~~~---~~----~~~~~~~l~~li~~~L~~dP  285 (496)
T PTZ00283        219 RKPYSKKADMFSLGVLLYELLTLKRPFDGE-----NMEEVMHKTL-AGRYD---PL----PPSISPEMQEIVTALLSSDP  285 (496)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHh-cCCCC---CC----CCCCCHHHHHHHHHHcccCh
Confidence            456789999999999999999999998532     1112222212 12211   11    22223378899999999999


Q ss_pred             CCCCCHHHHHHH
Q 047465           84 DDRPTVYDVVSM   95 (139)
Q Consensus        84 ~~Rps~~~v~~~   95 (139)
                      .+||++.+++..
T Consensus       286 ~~RPs~~ell~~  297 (496)
T PTZ00283        286 KRRPSSSKLLNM  297 (496)
T ss_pred             hhCcCHHHHHhC
Confidence            999999998753

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=98.99  E-value=1.1e-09  Score=79.09  Aligned_cols=78  Identities=14%  Similarity=0.186  Sum_probs=51.4

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++|+||+|+++||+++|+.|+......     ....... .....   .+ .  +......+.+++.+||+.+|.
T Consensus       201 ~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~-----~~~~~~~-~~~~~---~~-~--~~~~~~~~~~li~~cl~~~p~  268 (282)
T cd06636         201 ATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM-----RALFLIP-RNPPP---KL-K--SKKWSKKFIDFIEGCLVKNYL  268 (282)
T ss_pred             cCCCcccchhHHHHHHHHHHhCCCCccccCHH-----hhhhhHh-hCCCC---CC-c--ccccCHHHHHHHHHHhCCChh
Confidence            35678999999999999999999988532211     0011111 11111   11 1  112233788999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       269 ~Rp~~~ell~  278 (282)
T cd06636         269 SRPSTEQLLK  278 (282)
T ss_pred             hCcCHHHHhc
Confidence            9999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=98.99  E-value=1.2e-09  Score=78.35  Aligned_cols=78  Identities=18%  Similarity=0.266  Sum_probs=47.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++|+||+|++++|+++|+.|+.....     .............+   .+    |......+..+. .||..+|
T Consensus       183 ~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~---~~----~~~~~~~~~~li-~~~~~~p  249 (266)
T cd06651         183 GEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA-----MAAIFKIATQPTNP---QL----PSHISEHARDFL-GCIFVEA  249 (266)
T ss_pred             CCCCCchhhhHHHHHHHHHHHHCCCCccccch-----HHHHHHHhcCCCCC---CC----chhcCHHHHHHH-HHhcCCh
Confidence            34567899999999999999999999853321     11111111111111   11    111112344444 7888999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      ++||++.+++.
T Consensus       250 ~~Rp~~~eil~  260 (266)
T cd06651         250 RHRPSAEELLR  260 (266)
T ss_pred             hhCcCHHHHhc
Confidence            99999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=98.98  E-value=1.1e-09  Score=77.88  Aligned_cols=80  Identities=14%  Similarity=0.188  Sum_probs=50.9

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      .++.++|+||||++++||++|+.|+....... .    ............  .+..  +......+.+++.+||..+|.+
T Consensus       180 ~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~-~----~~~~~~~~~~~~--~~~~--~~~~~~~~~~li~~~l~~~p~~  250 (262)
T cd06613         180 GYDGKCDIWALGITAIELAELQPPMFDLHPMR-A----LFLISKSNFPPP--KLKD--KEKWSPVFHDFIKKCLTKDPKK  250 (262)
T ss_pred             CcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH-H----HHHHHhccCCCc--cccc--hhhhhHHHHHHHHHHcCCChhh
Confidence            57788999999999999999999885432111 0    111111100110  1101  1111226789999999999999


Q ss_pred             CCCHHHHHH
Q 047465           86 RPTVYDVVS   94 (139)
Q Consensus        86 Rps~~~v~~   94 (139)
                      ||++.+++.
T Consensus       251 Rpt~~~il~  259 (262)
T cd06613         251 RPTATKLLQ  259 (262)
T ss_pred             CCCHHHHhc
Confidence            999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=98.98  E-value=1.3e-09  Score=78.95  Aligned_cols=80  Identities=15%  Similarity=0.207  Sum_probs=53.2

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++|+|+||++++++++|+.|+......     ....... .....   ...+  +......+.+++..||+.+|
T Consensus       190 ~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~-----~~~~~~~-~~~~~---~~~~--~~~~~~~l~~li~~~l~~~p  258 (286)
T cd06614         190 RKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL-----RALFLIT-TKGIP---PLKN--PEKWSPEFKDFLNKCLVKDP  258 (286)
T ss_pred             CCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHH-hcCCC---CCcc--hhhCCHHHHHHHHHHhccCh
Confidence            345788999999999999999999987532211     1111111 11111   2211  22122378899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      ..||++.+++.
T Consensus       259 ~~Rpt~~~il~  269 (286)
T cd06614         259 EKRPSAEELLQ  269 (286)
T ss_pred             hhCcCHHHHhh
Confidence            99999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.98  E-value=1.6e-09  Score=78.46  Aligned_cols=89  Identities=19%  Similarity=0.148  Sum_probs=55.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcC---------chHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHH
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTD---------SLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHW   74 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l   74 (139)
                      ++.++.++||||||++++|+++++.+.......         ..............+...   +.    +......+.++
T Consensus       186 ~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~l  258 (284)
T cd05079         186 QSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRL---PR----PPNCPEEVYQL  258 (284)
T ss_pred             cCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccC---CC----CCCCCHHHHHH
Confidence            356788999999999999999976553211000         000000111111122211   11    22223378999


Q ss_pred             HHHhcccCCCCCCCHHHHHHHHhcc
Q 047465           75 TLLCAQESADDRPTVYDVVSMLTNE   99 (139)
Q Consensus        75 ~~~C~~~~p~~Rps~~~v~~~L~~~   99 (139)
                      +..||+.+|.+||++.+++..|+.+
T Consensus       259 i~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         259 MRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             HHHHccCCcccCcCHHHHHHHHHhh
Confidence            9999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=98.98  E-value=1.4e-09  Score=77.23  Aligned_cols=78  Identities=17%  Similarity=0.217  Sum_probs=52.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ++.++.++|+||+|++++++++|+.|+.....     ........ .+...   .+    +......+.+++.+||+.+|
T Consensus       176 ~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-----~~~~~~~~-~~~~~---~~----~~~~~~~~~~li~~~l~~~p  242 (257)
T cd08223         176 NKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-----NSLVYRII-EGKLP---PM----PKDYSPELGELIATMLSKRP  242 (257)
T ss_pred             CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HHHHHHHH-hcCCC---CC----ccccCHHHHHHHHHHhccCc
Confidence            34567899999999999999999988753211     11111111 12221   11    12222378999999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       243 ~~Rp~~~~~l~  253 (257)
T cd08223         243 EKRPSVKSILR  253 (257)
T ss_pred             ccCCCHHHHhc
Confidence            99999999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=98.98  E-value=1.7e-09  Score=77.33  Aligned_cols=78  Identities=19%  Similarity=0.258  Sum_probs=52.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ++.++.++|+|++|++++++++|+.|+.....     ...+.... .....   .+    +......+..++.+||+.+|
T Consensus       186 ~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~-~~~~~---~~----~~~~~~~~~~li~~~l~~~p  252 (267)
T cd06628         186 QTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ-----LQAIFKIG-ENASP---EI----PSNISSEAIDFLEKTFEIDH  252 (267)
T ss_pred             cCCCCchhhhHHHHHHHHHHhhCCCCCCCccH-----HHHHHHHh-ccCCC---cC----CcccCHHHHHHHHHHccCCc
Confidence            34567889999999999999999999863211     11111111 11111   11    22223378899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       253 ~~Rp~~~~il~  263 (267)
T cd06628         253 NKRPTAAELLK  263 (267)
T ss_pred             hhCcCHHHHhh
Confidence            99999998865

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=98.98  E-value=1.8e-09  Score=77.39  Aligned_cols=77  Identities=19%  Similarity=0.305  Sum_probs=50.9

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDR   86 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~R   86 (139)
                      ++.++|+||||+++|++++|+.|+......  ....+.....  ....   .+    |......+..++.+||+.+|.+|
T Consensus       188 ~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~--~~~~~~~~~~--~~~~---~~----~~~~~~~~~~li~~~l~~~p~~R  256 (268)
T cd06624         188 YGAPADIWSLGCTIVEMATGKPPFIELGEP--QAAMFKVGMF--KIHP---EI----PESLSAEAKNFILRCFEPDPDKR  256 (268)
T ss_pred             CCchhhhHHHHHHHHHHHhCCCCCccccCh--hhhHhhhhhh--ccCC---CC----CcccCHHHHHHHHHHcCCCchhC
Confidence            678999999999999999999987532211  1111111101  1111   11    22222378889999999999999


Q ss_pred             CCHHHHHH
Q 047465           87 PTVYDVVS   94 (139)
Q Consensus        87 ps~~~v~~   94 (139)
                      |++.+++.
T Consensus       257 pt~~~ll~  264 (268)
T cd06624         257 ASAHDLLQ  264 (268)
T ss_pred             CCHHHHHh
Confidence            99999875

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=98.97  E-value=6.1e-10  Score=79.76  Aligned_cols=83  Identities=13%  Similarity=0.169  Sum_probs=51.4

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +.++.++|+||+|++++|+++|+.|+......     .............  ..+.+  +......+.+++.+||+.+|.
T Consensus       184 ~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~-----~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~li~~~l~~~P~  254 (267)
T cd06646         184 GGYNQLCDIWAVGITAIELAELQPPMFDLHPM-----RALFLMSKSNFQP--PKLKD--KTKWSSTFHNFVKISLTKNPK  254 (267)
T ss_pred             CCCcchhhHHHHHHHHHHHHhCCCCccccchh-----hhheeeecCCCCC--CCCcc--ccccCHHHHHHHHHHhhCChh
Confidence            34677899999999999999999887422110     0000000000011  01111  111123788999999999999


Q ss_pred             CCCCHHHHHHHH
Q 047465           85 DRPTVYDVVSML   96 (139)
Q Consensus        85 ~Rps~~~v~~~L   96 (139)
                      +||++.+++..|
T Consensus       255 ~Rp~~~~il~~l  266 (267)
T cd06646         255 KRPTAERLLTHL  266 (267)
T ss_pred             hCcCHHHHhcCC
Confidence            999999987643

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=98.97  E-value=1.3e-09  Score=79.19  Aligned_cols=79  Identities=14%  Similarity=0.129  Sum_probs=52.2

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++||||||++++|+++|+.|+.....     ...... .......   .+..  +......+.+++.+||+.+|.
T Consensus       190 ~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~-----~~~~~~-~~~~~~~---~~~~--~~~~~~~l~~li~~~l~~~p~  258 (285)
T cd06648         190 LPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP-----LQAMKR-IRDNLPP---KLKN--LHKVSPRLRSFLDRMLVRDPA  258 (285)
T ss_pred             CCCCCcccHHHHHHHHHHHHhCCCCCcCCCH-----HHHHHH-HHhcCCC---CCcc--cccCCHHHHHHHHHHcccChh
Confidence            4578899999999999999999998743211     111111 1111111   1111  211223788999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       259 ~Rpt~~~il~  268 (285)
T cd06648         259 QRATAAELLN  268 (285)
T ss_pred             hCcCHHHHcc
Confidence            9999998874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=98.97  E-value=1.6e-09  Score=76.14  Aligned_cols=79  Identities=19%  Similarity=0.263  Sum_probs=52.4

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +..+.++|+|+||++++++++|+.|+.....     ...... .......   .+..  +......+.+++.+||+.+|.
T Consensus       172 ~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~-~~~~~~~---~~~~--~~~~~~~~~~~i~~~l~~~p~  240 (253)
T cd05122         172 KPYDYKADIWSLGITAIELAEGKPPYSELPP-----MKALFK-IATNGPP---GLRN--PEKWSDEFKDFLKKCLQKNPE  240 (253)
T ss_pred             CCCCccccHHHHHHHHHHHHhCCCCCCCCch-----HHHHHH-HHhcCCC---CcCc--ccccCHHHHHHHHHHccCChh
Confidence            4467899999999999999999998753211     111111 1112222   2222  222133788999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       241 ~R~t~~~~l~  250 (253)
T cd05122         241 KRPTAEQLLK  250 (253)
T ss_pred             hCCCHHHHhc
Confidence            9999998864

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.97  E-value=3.2e-10  Score=85.65  Aligned_cols=80  Identities=15%  Similarity=0.237  Sum_probs=55.3

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++..|+.|+||||+|+..+||.+|..|+....+.      .+...+.. ..+   +.++  . .....+.+++..|+..+
T Consensus       184 ~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPm------rvlflIpk-~~P---P~L~--~-~~S~~~kEFV~~CL~k~  250 (467)
T KOG0201|consen  184 KQSGYDTKADIWSLGITAIELAKGEPPHSKLHPM------RVLFLIPK-SAP---PRLD--G-DFSPPFKEFVEACLDKN  250 (467)
T ss_pred             ccccccchhhhhhhhHHHHHHhcCCCCCcccCcc------eEEEeccC-CCC---Cccc--c-ccCHHHHHHHHHHhhcC
Confidence            4457899999999999999999999998543321      11111111 111   1221  1 22237899999999999


Q ss_pred             CCCCCCHHHHHHH
Q 047465           83 ADDRPTVYDVVSM   95 (139)
Q Consensus        83 p~~Rps~~~v~~~   95 (139)
                      |..||+++++++.
T Consensus       251 P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  251 PEFRPSAKELLKH  263 (467)
T ss_pred             cccCcCHHHHhhh
Confidence            9999999999863

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=98.97  E-value=2.4e-09  Score=76.58  Aligned_cols=79  Identities=16%  Similarity=0.295  Sum_probs=52.2

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhc-cchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANS-HIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++|+|++|++++++++|+.|+......     ......... ....   .+    +......+..++..||+.+
T Consensus       182 ~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~---~~----~~~~~~~~~~~i~~~l~~~  249 (265)
T cd06631         182 ESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL-----AAMFYIGAHRGLMP---RL----PDSFSAAAIDFVTSCLTRD  249 (265)
T ss_pred             CCCCcchhhHHHHHHHHHHHHhCCCccccCChH-----HHHHHhhhccCCCC---CC----CCCCCHHHHHHHHHHhcCC
Confidence            345678999999999999999999998532211     111111111 1111   11    2222337889999999999


Q ss_pred             CCCCCCHHHHHH
Q 047465           83 ADDRPTVYDVVS   94 (139)
Q Consensus        83 p~~Rps~~~v~~   94 (139)
                      |.+||++.+++.
T Consensus       250 p~~Rp~~~~~l~  261 (265)
T cd06631         250 QHERPSALQLLR  261 (265)
T ss_pred             cccCCCHHHHhc
Confidence            999999998864

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=98.96  E-value=1.9e-09  Score=76.61  Aligned_cols=78  Identities=19%  Similarity=0.313  Sum_probs=52.9

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++|+||+|+++||+++|+.|+.....     ........ .+...   ..    +......+.+++..||..+|.
T Consensus       176 ~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-----~~~~~~~~-~~~~~---~~----~~~~~~~~~~~i~~~l~~~p~  242 (256)
T cd08221         176 VKYNFKSDIWALGCVLYELLTLKRTFDATNP-----LNLVVKIV-QGNYT---PV----VSVYSSELISLVHSLLQQDPE  242 (256)
T ss_pred             CCCCCcchhHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHH-cCCCC---CC----ccccCHHHHHHHHHHcccCcc
Confidence            3467889999999999999999998853211     12222222 22222   11    111223788899999999999


Q ss_pred             CCCCHHHHHHH
Q 047465           85 DRPTVYDVVSM   95 (139)
Q Consensus        85 ~Rps~~~v~~~   95 (139)
                      +||++.+++..
T Consensus       243 ~R~s~~~ll~~  253 (256)
T cd08221         243 KRPTADEVLDQ  253 (256)
T ss_pred             cCCCHHHHhhC
Confidence            99999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=98.96  E-value=1.9e-09  Score=76.39  Aligned_cols=80  Identities=28%  Similarity=0.344  Sum_probs=53.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++|+|++|++++++++ |+.|+....  ......    ....+...   ..    +......+.+++.+|+..+
T Consensus       178 ~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~--~~~~~~----~~~~~~~~---~~----~~~~~~~~~~~i~~~l~~~  244 (258)
T smart00219      178 DGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS--NEEVLE----YLKKGYRL---PK----PENCPPEIYKLMLQCWAED  244 (258)
T ss_pred             cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHH----HHhcCCCC---CC----CCcCCHHHHHHHHHHCcCC
Confidence            4567889999999999999998 666664211  111111    11222222   11    2333448899999999999


Q ss_pred             CCCCCCHHHHHHHH
Q 047465           83 ADDRPTVYDVVSML   96 (139)
Q Consensus        83 p~~Rps~~~v~~~L   96 (139)
                      |.+||++.+++..|
T Consensus       245 p~~Rpt~~~ll~~l  258 (258)
T smart00219      245 PEDRPTFSELVEIL  258 (258)
T ss_pred             hhhCcCHHHHHhhC
Confidence            99999999998764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.96  E-value=2e-09  Score=78.00  Aligned_cols=81  Identities=17%  Similarity=0.278  Sum_probs=51.9

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      .++.++||||+|+++||+++|+.|+....    .......... .+..+   .+...-+......+.+++..||+.+|.+
T Consensus       186 ~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~l~~li~~~l~~~p~~  257 (288)
T cd06616         186 GYDVRSDVWSLGITLYEVATGKFPYPKWN----SVFDQLTQVV-KGDPP---ILSNSEEREFSPSFVNFINLCLIKDESK  257 (288)
T ss_pred             CCcchhhhhHHHHHHHHHHhCCCCchhcc----hHHHHHhhhc-CCCCC---cCCCcCCCccCHHHHHHHHHHccCChhh
Confidence            57889999999999999999999985321    1111111111 11111   1100000112237889999999999999


Q ss_pred             CCCHHHHHH
Q 047465           86 RPTVYDVVS   94 (139)
Q Consensus        86 Rps~~~v~~   94 (139)
                      ||++.+++.
T Consensus       258 Rpt~~~i~~  266 (288)
T cd06616         258 RPKYKELLE  266 (288)
T ss_pred             CcCHHHHhc
Confidence            999999875

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=98.96  E-value=2.3e-09  Score=77.77  Aligned_cols=84  Identities=18%  Similarity=0.242  Sum_probs=53.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCc---CchHHHHHHHHHhhccchhhhhhhhccCC--CCCHHHHHHHHHHh
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWT---DSLIFVIYYLRVANSHIFLCLWLIINLRH--GIYGRTTGHWTLLC   78 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~d~~p--~~~~~~~~~l~~~C   78 (139)
                      ++.++.++|||++|+++|++++|+.|+.....   .......+.    ......   .+.+..+  ......+.+++..|
T Consensus       177 ~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~~li~~~  249 (287)
T cd06621         177 GKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYI----VNMPNP---ELKDEPGNGIKWSEEFKDFIKQC  249 (287)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHH----hcCCch---hhccCCCCCCchHHHHHHHHHHH
Confidence            45678899999999999999999999864321   011222211    111111   1111000  11123788999999


Q ss_pred             cccCCCCCCCHHHHHH
Q 047465           79 AQESADDRPTVYDVVS   94 (139)
Q Consensus        79 ~~~~p~~Rps~~~v~~   94 (139)
                      |..+|.+||++.+++.
T Consensus       250 l~~~p~~Rpt~~eil~  265 (287)
T cd06621         250 LEKDPTRRPTPWDMLE  265 (287)
T ss_pred             cCCCcccCCCHHHHHh
Confidence            9999999999999976

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=98.95  E-value=1.4e-09  Score=80.34  Aligned_cols=78  Identities=14%  Similarity=0.087  Sum_probs=53.0

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .+..++.++|+||+|++++++++|+.||.....  ..   .. ..+.....    ..    |......+.+++..||+.+
T Consensus       169 ~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~--~~---~~-~~i~~~~~----~~----~~~~~~~~~~li~~~l~~d  234 (318)
T cd05570         169 SYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE--DE---LF-QSILEDEV----RY----PRWLSKEAKSILKSFLTKN  234 (318)
T ss_pred             cCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH--HH---HH-HHHHcCCC----CC----CCcCCHHHHHHHHHHccCC
Confidence            345678899999999999999999999853221  11   11 11111111    00    2223347889999999999


Q ss_pred             CCCCCCH-----HHHHH
Q 047465           83 ADDRPTV-----YDVVS   94 (139)
Q Consensus        83 p~~Rps~-----~~v~~   94 (139)
                      |.+||++     .+++.
T Consensus       235 P~~R~s~~~~~~~~ll~  251 (318)
T cd05570         235 PEKRLGCLPTGEQDIKG  251 (318)
T ss_pred             HHHcCCCCCCCHHHHhc
Confidence            9999999     77764

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.95  E-value=2.1e-09  Score=76.42  Aligned_cols=77  Identities=18%  Similarity=0.165  Sum_probs=51.2

Q ss_pred             CCCccchhhhHhHHHHHHHhC-CCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSG-KKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      .++.++|+||||+++||++++ ..|+......     ... .........         +......+.+++..||..+|.
T Consensus       182 ~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~-----~~~-~~~~~~~~~---------~~~~~~~~~~li~~~l~~~p~  246 (259)
T cd05037         182 SLTIAADKWSFGTTLLEICSNGEEPLSTLSSS-----EKE-RFYQDQHRL---------PMPDCAELANLINQCWTYDPT  246 (259)
T ss_pred             CcchhhHHHHHHHHHHHHHhCCCCCcccCCch-----hHH-HHHhcCCCC---------CCCCchHHHHHHHHHhccChh
Confidence            578899999999999999995 5555322110     111 111111111         111123788999999999999


Q ss_pred             CCCCHHHHHHHHh
Q 047465           85 DRPTVYDVVSMLT   97 (139)
Q Consensus        85 ~Rps~~~v~~~L~   97 (139)
                      +||++.++++.|+
T Consensus       247 ~Rpt~~~il~~l~  259 (259)
T cd05037         247 KRPSFRAILRDLN  259 (259)
T ss_pred             hCCCHHHHHHhcC
Confidence            9999999998774

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=98.94  E-value=2.1e-09  Score=76.68  Aligned_cols=80  Identities=19%  Similarity=0.307  Sum_probs=51.4

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccC-CCCCHHHHHHHHHHhcccCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLR-HGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      .++.++|+||||+++++|++|+.|+..... ......    .... ...   .+.... .......+.+++..||+.+|.
T Consensus       183 ~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-~~~~~~----~~~~-~~~---~~~~~~~~~~~~~~~~~li~~~l~~~p~  253 (267)
T cd06610         183 GYDFKADIWSFGITAIELATGAAPYSKYPP-MKVLML----TLQN-DPP---SLETGADYKKYSKSFRKMISLCLQKDPS  253 (267)
T ss_pred             CcCcccchHhHhHHHHHHHhCCCCccccCh-hhhHHH----HhcC-CCC---CcCCccccccccHHHHHHHHHHcCCChh
Confidence            577889999999999999999999853322 111111    1111 111   110000 011223778999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       254 ~Rp~~~~ll~  263 (267)
T cd06610         254 KRPTAEELLK  263 (267)
T ss_pred             hCcCHHHHhh
Confidence            9999999875

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=98.94  E-value=2.6e-09  Score=77.35  Aligned_cols=86  Identities=20%  Similarity=0.312  Sum_probs=54.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcC------chHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHH
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTD------SLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLL   77 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~   77 (139)
                      ++.++.++|+||||++++++++|+.|+......      .............. ...   .+.   .......+.+++..
T Consensus       176 ~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~---~~~~~~~~~~li~~  248 (284)
T cd06620         176 GGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQE-PPP---RLP---SSDFPEDLRDFVDA  248 (284)
T ss_pred             cCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhc-cCC---CCC---chhcCHHHHHHHHH
Confidence            456788999999999999999999998643221      01111111111111 111   110   01022268889999


Q ss_pred             hcccCCCCCCCHHHHHHHH
Q 047465           78 CAQESADDRPTVYDVVSML   96 (139)
Q Consensus        78 C~~~~p~~Rps~~~v~~~L   96 (139)
                      ||+.+|.+||++.+++.+.
T Consensus       249 ~l~~dp~~Rpt~~e~~~~~  267 (284)
T cd06620         249 CLLKDPTERPTPQQLCAMP  267 (284)
T ss_pred             HhcCCcccCcCHHHHhcCc
Confidence            9999999999999998753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=98.94  E-value=2.5e-09  Score=77.65  Aligned_cols=82  Identities=11%  Similarity=0.066  Sum_probs=52.7

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .+..++.++||||+|+++||+++|+.||.......  ....+.........    ..    +......+..++.+||+.+
T Consensus       174 ~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~----~~----~~~~s~~~~~li~~~l~~~  243 (285)
T cd05631         174 NNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV--KREEVDRRVKEDQE----EY----SEKFSEDAKSICRMLLTKN  243 (285)
T ss_pred             cCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch--hHHHHHHHhhcccc----cC----CccCCHHHHHHHHHHhhcC
Confidence            34568899999999999999999999986432211  01111111111111    11    1122237889999999999


Q ss_pred             CCCCCC-----HHHHHH
Q 047465           83 ADDRPT-----VYDVVS   94 (139)
Q Consensus        83 p~~Rps-----~~~v~~   94 (139)
                      |.+||+     +.+++.
T Consensus       244 P~~R~~~~~~~~~~~~~  260 (285)
T cd05631         244 PKERLGCRGNGAAGVKQ  260 (285)
T ss_pred             HHHhcCCCCCCHHHHhc
Confidence            999997     677764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=98.94  E-value=4e-09  Score=77.46  Aligned_cols=79  Identities=19%  Similarity=0.225  Sum_probs=52.1

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +.++.++||||||+++|++++|+.|+.....     ...... ...+...   ...   +......+..++.+||+.+|.
T Consensus       189 ~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~~~-~~~~~~~---~~~---~~~~~~~~~~li~~cl~~~P~  256 (308)
T cd06634         189 GQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSALYH-IAQNESP---ALQ---SGHWSEYFRNFVDSCLQKIPQ  256 (308)
T ss_pred             CCCCcccchHHHHHHHHHHHcCCCCCccccH-----HHHHHH-HhhcCCC---CcC---cccccHHHHHHHHHHhhCCcc
Confidence            4577899999999999999999988743211     011111 1111111   111   112223678899999999999


Q ss_pred             CCCCHHHHHHH
Q 047465           85 DRPTVYDVVSM   95 (139)
Q Consensus        85 ~Rps~~~v~~~   95 (139)
                      +||++.+++..
T Consensus       257 ~Rp~~~~ll~~  267 (308)
T cd06634         257 DRPTSEVLLKH  267 (308)
T ss_pred             cCCCHHHHhhC
Confidence            99999998765

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=98.94  E-value=4.7e-09  Score=75.44  Aligned_cols=83  Identities=24%  Similarity=0.221  Sum_probs=54.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++..+.++||||+|++++++++ |..|+.....  ..   .+ .....+..    .+..  +......+..++.+||+.+
T Consensus       192 ~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~--~~---~~-~~~~~~~~----~~~~--~~~~~~~l~~~i~~~l~~~  259 (275)
T cd05046         192 EDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD--EE---VL-NRLQAGKL----ELPV--PEGCPSRLYKLMTRCWAVN  259 (275)
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCCccccch--HH---HH-HHHHcCCc----CCCC--CCCCCHHHHHHHHHHcCCC
Confidence            3456788999999999999998 6666642211  11   11 11111111    1111  2223347889999999999


Q ss_pred             CCCCCCHHHHHHHHhc
Q 047465           83 ADDRPTVYDVVSMLTN   98 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~   98 (139)
                      |.+||++.+++..|.+
T Consensus       260 p~~Rp~~~~~l~~l~~  275 (275)
T cd05046         260 PKDRPSFSELVSALGE  275 (275)
T ss_pred             cccCCCHHHHHHHhcC
Confidence            9999999999998763

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=98.93  E-value=4e-09  Score=77.72  Aligned_cols=83  Identities=19%  Similarity=0.267  Sum_probs=54.3

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      .+.++.++||||||++++|+++|+.|+.....  .   .............    . .  .......+..++.+||+.+|
T Consensus       198 ~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~--~---~~~~~~~~~~~~~----~-~--~~~~~~~l~~li~~~l~~~p  265 (317)
T cd06635         198 EGQYDGKVDVWSLGITCIELAERKPPLFNMNA--M---SALYHIAQNESPT----L-Q--SNEWSDYFRNFVDSCLQKIP  265 (317)
T ss_pred             CCCCCccccHHHHHHHHHHHHhCCCCCCCccH--H---HHHHHHHhccCCC----C-C--CccccHHHHHHHHHHccCCc
Confidence            35678899999999999999999988743211  1   1111111111111    1 0  11222367889999999999


Q ss_pred             CCCCCHHHHHHHHhc
Q 047465           84 DDRPTVYDVVSMLTN   98 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~   98 (139)
                      .+||++.+++..+-.
T Consensus       266 ~~Rpt~~~il~~~~~  280 (317)
T cd06635         266 QDRPTSEELLKHMFV  280 (317)
T ss_pred             ccCcCHHHHHhChhh
Confidence            999999999875443

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=98.93  E-value=3.1e-09  Score=75.37  Aligned_cols=76  Identities=24%  Similarity=0.364  Sum_probs=51.2

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDR   86 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~R   86 (139)
                      ++.++|+||||++++++++|+.|+.....     ..............   .+    +......+.+++.+||+.+|.+|
T Consensus       179 ~~~~~D~~slG~~l~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~~p~~R  246 (258)
T cd06632         179 YGLAADIWSLGCTVLEMATGKPPWSQLEG-----VAAVFKIGRSKELP---PI----PDHLSDEAKDFILKCLQRDPSLR  246 (258)
T ss_pred             CCchhhhHHHHHHHHHHHhCCCCcccCcH-----HHHHHHHHhcccCC---Cc----CCCcCHHHHHHHHHHhhcCcccC
Confidence            67889999999999999999999854321     11111111111111   11    11122377889999999999999


Q ss_pred             CCHHHHHH
Q 047465           87 PTVYDVVS   94 (139)
Q Consensus        87 ps~~~v~~   94 (139)
                      |++.+++.
T Consensus       247 p~~~~~l~  254 (258)
T cd06632         247 PTAAELLE  254 (258)
T ss_pred             cCHHHHhc
Confidence            99999864

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=98.92  E-value=3.9e-09  Score=75.21  Aligned_cols=78  Identities=18%  Similarity=0.241  Sum_probs=50.5

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDR   86 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~R   86 (139)
                      .+.++|||+||++++++++|+.|+...... .   ..... ...+...   .+.+  .......+.+++..||+.+|.+|
T Consensus       183 ~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~-~---~~~~~-~~~~~~~---~~~~--~~~~~~~~~~li~~~l~~~p~~R  252 (264)
T cd06626         183 HGRAADIWSLGCVVLEMATGKRPWSELDNE-F---QIMFH-VGAGHKP---PIPD--SLQLSPEGKDFLDRCLESDPKKR  252 (264)
T ss_pred             CCcccchHHHHHHHHHHHhCCCCccCCcch-H---HHHHH-HhcCCCC---CCCc--ccccCHHHHHHHHHHccCCcccC
Confidence            678899999999999999999998533211 1   11111 1111111   1111  11112367889999999999999


Q ss_pred             CCHHHHHH
Q 047465           87 PTVYDVVS   94 (139)
Q Consensus        87 ps~~~v~~   94 (139)
                      |++.+++.
T Consensus       253 ~~~~~i~~  260 (264)
T cd06626         253 PTASELLQ  260 (264)
T ss_pred             CCHHHHhc
Confidence            99998864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=98.92  E-value=4.8e-09  Score=78.02  Aligned_cols=29  Identities=28%  Similarity=0.494  Sum_probs=25.3

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEF   32 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~   32 (139)
                      +..++.++|+||||+++||+++|+.|+..
T Consensus       176 ~~~~~~~~DvwslG~il~~l~~g~~p~~~  204 (333)
T cd06650         176 GTHYSVQSDIWSMGLSLVEMAIGRYPIPP  204 (333)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            44678899999999999999999998853

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=98.92  E-value=3.3e-09  Score=77.56  Aligned_cols=81  Identities=12%  Similarity=0.118  Sum_probs=52.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||||++++|+++|+.|+.....  ...   .. .+......   ....  +......+.+++..||+.+|
T Consensus       191 ~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--~~~---~~-~~~~~~~~---~~~~--~~~~~~~l~~~i~~~l~~~P  259 (297)
T cd06659         191 RTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP--VQA---MK-RLRDSPPP---KLKN--AHKISPVLRDFLERMLTREP  259 (297)
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHH---HH-HHhccCCC---Cccc--cCCCCHHHHHHHHHHhcCCc
Confidence            34578899999999999999999998753211  111   11 11111111   1111  11122367889999999999


Q ss_pred             CCCCCHHHHHHH
Q 047465           84 DDRPTVYDVVSM   95 (139)
Q Consensus        84 ~~Rps~~~v~~~   95 (139)
                      .+||++.++++.
T Consensus       260 ~~Rps~~~ll~~  271 (297)
T cd06659         260 QERATAQELLDH  271 (297)
T ss_pred             ccCcCHHHHhhC
Confidence            999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=98.92  E-value=5.4e-09  Score=75.61  Aligned_cols=79  Identities=16%  Similarity=0.224  Sum_probs=51.9

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      .++.++|+||+|++++++++|+.|+.....  ....... .....+...   .+    +......+..++..||+.+|.+
T Consensus       183 ~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~~-~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~~p~~  252 (286)
T cd06622         183 TYTVQSDVWSLGLSILEMALGRYPYPPETY--ANIFAQL-SAIVDGDPP---TL----PSGYSDDAQDFVAKCLNKIPNR  252 (286)
T ss_pred             CCCcccchHhHHHHHHHHHhCCCCCCCcch--hhHHHHH-HHHhhcCCC---CC----CcccCHHHHHHHHHHcccCccc
Confidence            357899999999999999999999853211  1111111 111111111   11    1112337889999999999999


Q ss_pred             CCCHHHHHH
Q 047465           86 RPTVYDVVS   94 (139)
Q Consensus        86 Rps~~~v~~   94 (139)
                      ||++.+++.
T Consensus       253 Rp~~~~l~~  261 (286)
T cd06622         253 RPTYAQLLE  261 (286)
T ss_pred             CCCHHHHhc
Confidence            999998875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=98.91  E-value=2.6e-09  Score=77.30  Aligned_cols=84  Identities=14%  Similarity=0.109  Sum_probs=53.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ++.++.++||||+|+++||+++|+.|+...... ............ ...    ...   .......+.+++..||+.+|
T Consensus       168 ~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~-~~~~~~~~~~~~-~~~----~~~---~~~~~~~~~~li~~~L~~~P  238 (277)
T cd05607         168 EEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK-VAKEELKRRTLE-DEV----KFE---HQNFTEESKDICRLFLAKKP  238 (277)
T ss_pred             cCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch-hhHHHHHHHhhc-ccc----ccc---cccCCHHHHHHHHHHhccCH
Confidence            445788999999999999999999998543221 111111111111 111    000   11123378899999999999


Q ss_pred             CCCCCHHHHHHHH
Q 047465           84 DDRPTVYDVVSML   96 (139)
Q Consensus        84 ~~Rps~~~v~~~L   96 (139)
                      .+||++.+++..+
T Consensus       239 ~~R~~~~~~~~~~  251 (277)
T cd05607         239 EDRLGSREKNDDP  251 (277)
T ss_pred             hhCCCCccchhhh
Confidence            9999997765433

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=98.91  E-value=4.3e-09  Score=75.96  Aligned_cols=79  Identities=18%  Similarity=0.317  Sum_probs=53.0

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++|+||||++++++++|..|+.....     .... .........   . +   +......+.+++.+||+.+|
T Consensus       175 ~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----~~~~-~~~~~~~~~---~-~---~~~~~~~~~~~i~~~l~~~p  241 (277)
T cd06641         175 QSAYDSKADIWSLGITAIELAKGEPPHSELHP-----MKVL-FLIPKNNPP---T-L---EGNYSKPLKEFVEACLNKEP  241 (277)
T ss_pred             cCCCCchhhHHHHHHHHHHHHcCCCCCCccch-----HHHH-HHHhcCCCC---C-C---CcccCHHHHHHHHHHccCCh
Confidence            34567889999999999999999998753221     1111 111111111   1 1   11122378889999999999


Q ss_pred             CCCCCHHHHHHH
Q 047465           84 DDRPTVYDVVSM   95 (139)
Q Consensus        84 ~~Rps~~~v~~~   95 (139)
                      .+||++.+++..
T Consensus       242 ~~Rp~~~~~l~~  253 (277)
T cd06641         242 SFRPTAKELLKH  253 (277)
T ss_pred             hhCcCHHHHHhC
Confidence            999999999873

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=98.91  E-value=3.1e-09  Score=82.87  Aligned_cols=78  Identities=17%  Similarity=0.088  Sum_probs=53.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|++++||++|+.|+....     .......... +...   ..    |......+.+++..||+.+|
T Consensus       245 ~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~-----~~~~~~~~~~-~~~~---~~----~~~~s~~~~~li~~~L~~dP  311 (478)
T PTZ00267        245 RKRYSKKADMWSLGVILYELLTLHRPFKGPS-----QREIMQQVLY-GKYD---PF----PCPVSSGMKALLDPLLSKNP  311 (478)
T ss_pred             CCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHh-CCCC---CC----CccCCHHHHHHHHHHhccCh
Confidence            4568889999999999999999999985321     1111111111 1111   11    22223378999999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      ++||++.+++.
T Consensus       312 ~~Rps~~~~l~  322 (478)
T PTZ00267        312 ALRPTTQQLLH  322 (478)
T ss_pred             hhCcCHHHHHh
Confidence            99999998864

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=98.91  E-value=2.9e-09  Score=77.70  Aligned_cols=80  Identities=14%  Similarity=0.142  Sum_probs=52.1

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++|+||||++++|+++|+.|+....  .......    .......   .+.+  .......+..++..||..+|.
T Consensus       193 ~~~~~~~Dv~slGvil~el~~g~~p~~~~~--~~~~~~~----~~~~~~~---~~~~--~~~~~~~~~~li~~~l~~~P~  261 (292)
T cd06658         193 LPYGTEVDIWSLGIMVIEMIDGEPPYFNEP--PLQAMRR----IRDNLPP---RVKD--SHKVSSVLRGFLDLMLVREPS  261 (292)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHH----HHhcCCC---cccc--ccccCHHHHHHHHHHccCChh
Confidence            456789999999999999999999875321  1111111    1111111   1111  112223678899999999999


Q ss_pred             CCCCHHHHHHH
Q 047465           85 DRPTVYDVVSM   95 (139)
Q Consensus        85 ~Rps~~~v~~~   95 (139)
                      +||++.++++.
T Consensus       262 ~Rpt~~~il~~  272 (292)
T cd06658         262 QRATAQELLQH  272 (292)
T ss_pred             HCcCHHHHhhC
Confidence            99999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=98.90  E-value=5.4e-09  Score=73.78  Aligned_cols=79  Identities=18%  Similarity=0.236  Sum_probs=53.2

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ...+.++|||++|++++++++|+.|+.....    ...............   .+    +......+.+++.+|++.+|.
T Consensus       178 ~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~---~~----~~~~~~~l~~~i~~~l~~~p~  246 (260)
T cd06606         178 EEYGRAADIWSLGCTVIEMATGKPPWSELGN----PMAALYKIGSSGEPP---EI----PEHLSEEAKDFLRKCLRRDPK  246 (260)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCCc----hHHHHHhccccCCCc---CC----CcccCHHHHHHHHHhCcCChh
Confidence            3467899999999999999999999864331    111111111111111   11    222233788999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       247 ~Rp~~~~ll~  256 (260)
T cd06606         247 KRPTADELLQ  256 (260)
T ss_pred             hCCCHHHHhh
Confidence            9999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=98.90  E-value=3e-09  Score=76.69  Aligned_cols=78  Identities=18%  Similarity=0.340  Sum_probs=51.3

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      .++.++|+|++|++++++++|+.|+..... ...   ...... .+...   .+..  .. .+..+.+++..||..+|++
T Consensus       183 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-~~~---~~~~~~-~~~~~---~~~~--~~-~~~~l~~li~~~l~~~p~~  251 (283)
T cd06617         183 GYDVKSDVWSLGITMIELATGRFPYDSWKT-PFQ---QLKQVV-EEPSP---QLPA--EK-FSPEFQDFVNKCLKKNYKE  251 (283)
T ss_pred             ccCccccchhhHHHHHHHHhCCCCCCcccc-CHH---HHHHHH-hcCCC---CCCc--cc-cCHHHHHHHHHHccCChhh
Confidence            457889999999999999999998853221 111   111111 11111   1111  11 1237889999999999999


Q ss_pred             CCCHHHHHH
Q 047465           86 RPTVYDVVS   94 (139)
Q Consensus        86 Rps~~~v~~   94 (139)
                      ||++.+++.
T Consensus       252 Rp~~~~il~  260 (283)
T cd06617         252 RPNYPELLQ  260 (283)
T ss_pred             CcCHHHHhc
Confidence            999999875

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=98.90  E-value=5.1e-09  Score=75.79  Aligned_cols=89  Identities=13%  Similarity=0.060  Sum_probs=51.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHh------------hccch--hhhhhhhccC------
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVA------------NSHIF--LCLWLIINLR------   63 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~--~~~~~~~d~~------   63 (139)
                      +..++.++|+||+|++++|+++|+.||...... ..+.. +....            .....  ..++......      
T Consensus       175 ~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (287)
T cd07848         175 GAPYGKAVDMWSVGCILGELSDGQPLFPGESEI-DQLFT-IQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRY  252 (287)
T ss_pred             CCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHH-HHHHH-HHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhh
Confidence            456788999999999999999999988642211 11100 00000            00000  0000000000      


Q ss_pred             CCCCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           64 HGIYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        64 p~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      .......+.+++.+|++.+|++||++.+++.
T Consensus       253 ~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         253 LGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             hcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            0011226889999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=98.90  E-value=3.1e-09  Score=75.78  Aligned_cols=82  Identities=12%  Similarity=-0.109  Sum_probs=51.1

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +.++.++||||+|++++++++|..|+.....  ..    .......+....  ....  .......+.+++.+||+.+|+
T Consensus       168 ~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~----~~~~~~~~~~~~--~~~~--~~~~~~~~~~~i~~~l~~~p~  237 (260)
T cd05611         168 VGDDKMSDWWSLGCVIFEFLFGYPPFHAETP--DA----VFDNILSRRINW--PEEV--KEFCSPEAVDLINRLLCMDPA  237 (260)
T ss_pred             CCCcchhhhHHHHHHHHHHHHCCCCCCCCCH--HH----HHHHHHhcccCC--CCcc--cccCCHHHHHHHHHHccCCHH
Confidence            4468899999999999999999999853221  11    111111111100  0000  112233789999999999999


Q ss_pred             CCCCHHHHHHHH
Q 047465           85 DRPTVYDVVSML   96 (139)
Q Consensus        85 ~Rps~~~v~~~L   96 (139)
                      +||++..+.+.|
T Consensus       238 ~R~~~~~~~~~l  249 (260)
T cd05611         238 KRLGANGYQEIK  249 (260)
T ss_pred             HccCCCcHHHHH
Confidence            999776554433

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=98.90  E-value=3.1e-09  Score=77.83  Aligned_cols=84  Identities=10%  Similarity=0.005  Sum_probs=53.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ++.++.++|+||||++++|+++|+.|+.....  .   .............   .. .  +......+..++.+||+.+|
T Consensus       190 ~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~--~---~~~~~~~~~~~~~---~~-~--~~~~~~~~~~li~~~l~~~P  258 (305)
T cd05609         190 RQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP--E---ELFGQVISDDIEW---PE-G--DEALPADAQDLISRLLRQNP  258 (305)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--H---HHHHHHHhcccCC---CC-c--cccCCHHHHHHHHHHhccCh
Confidence            34578899999999999999999998852211  1   1111111111110   00 0  11223378999999999999


Q ss_pred             CCCCCHHHHHHHHhc
Q 047465           84 DDRPTVYDVVSMLTN   98 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~   98 (139)
                      ++||++..+.+.|+.
T Consensus       259 ~~R~~~~~~~~ll~~  273 (305)
T cd05609         259 LERLGTGGAFEVKQH  273 (305)
T ss_pred             hhccCccCHHHHHhC
Confidence            999997666665555

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=98.89  E-value=1.9e-09  Score=79.41  Aligned_cols=72  Identities=15%  Similarity=0.137  Sum_probs=47.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|++++||++|+.||....     .......... ...    .+    |......+.+++..||+.+|
T Consensus       167 ~~~~~~~~DvwslGvil~el~tg~~pf~~~~-----~~~~~~~~~~-~~~----~~----~~~~~~~~~~li~~~L~~dp  232 (312)
T cd05585         167 GHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN-----VNEMYRKILQ-EPL----RF----PDGFDRDAKDLLIGLLSRDP  232 (312)
T ss_pred             CCCCCCccceechhHHHHHHHhCCCCcCCCC-----HHHHHHHHHc-CCC----CC----CCcCCHHHHHHHHHHcCCCH
Confidence            4457889999999999999999999985321     1111111121 111    11    22223378899999999999


Q ss_pred             CCCCCH
Q 047465           84 DDRPTV   89 (139)
Q Consensus        84 ~~Rps~   89 (139)
                      .+||++
T Consensus       233 ~~R~~~  238 (312)
T cd05585         233 TRRLGY  238 (312)
T ss_pred             HHcCCC
Confidence            999864

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=98.89  E-value=5.3e-09  Score=75.06  Aligned_cols=80  Identities=20%  Similarity=0.315  Sum_probs=50.5

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDR   86 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~R   86 (139)
                      ++.++|+||+|++++|+++|..|+.....     ...............+.....  +.+ ...+.+++..||+.+|.+|
T Consensus       189 ~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~li~~~l~~~p~~R  260 (272)
T cd06629         189 YSAKVDIWSLGCVVLEMFAGRRPWSDEEA-----IAAMFKLGNKRSAPPIPPDVS--MNL-SPVALDFLNACFTINPDNR  260 (272)
T ss_pred             CCccchhHHHHHHHHHHHhCCCCCcCcch-----HHHHHHhhccccCCcCCcccc--ccC-CHHHHHHHHHHhcCChhhC
Confidence            67889999999999999999998852211     111111111111110001110  111 2278889999999999999


Q ss_pred             CCHHHHHH
Q 047465           87 PTVYDVVS   94 (139)
Q Consensus        87 ps~~~v~~   94 (139)
                      |++.+++.
T Consensus       261 ps~~~il~  268 (272)
T cd06629         261 PTARELLQ  268 (272)
T ss_pred             CCHHHHhh
Confidence            99999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=98.89  E-value=1.7e-09  Score=78.86  Aligned_cols=81  Identities=15%  Similarity=0.164  Sum_probs=52.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      .+.++.++|+||||+++|++++|+.||......     ....... .....   .+..  +......+.+++.+||+.+|
T Consensus       189 ~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~-----~~~~~~~-~~~~~---~~~~--~~~~~~~l~~li~~~l~~~p  257 (293)
T cd06647         189 RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL-----RALYLIA-TNGTP---ELQN--PEKLSAIFRDFLNRCLEMDV  257 (293)
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCCCCCChh-----hheeehh-cCCCC---CCCC--ccccCHHHHHHHHHHccCCh
Confidence            345678999999999999999999998532211     0000000 01111   1111  11112267889999999999


Q ss_pred             CCCCCHHHHHHH
Q 047465           84 DDRPTVYDVVSM   95 (139)
Q Consensus        84 ~~Rps~~~v~~~   95 (139)
                      .+||++.+++.+
T Consensus       258 ~~Rp~~~~il~h  269 (293)
T cd06647         258 EKRGSAKELLQH  269 (293)
T ss_pred             hhCcCHHHHhcC
Confidence            999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=98.89  E-value=5.4e-09  Score=74.82  Aligned_cols=81  Identities=12%  Similarity=0.173  Sum_probs=50.7

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +.++.++|+||+|++++++++++.|+...... ..    ...........  ..+.+  .......+.+++.+|++.+|.
T Consensus       184 ~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~-~~----~~~~~~~~~~~--~~~~~--~~~~~~~~~~li~~~l~~~P~  254 (267)
T cd06645         184 GGYNQLCDIWAVGITAIELAELQPPMFDLHPM-RA----LFLMTKSNFQP--PKLKD--KMKWSNSFHHFVKMALTKNPK  254 (267)
T ss_pred             CCCCchhhhHHHHHHHHHHhcCCCCcccccch-hh----HHhhhccCCCC--Ccccc--cCCCCHHHHHHHHHHccCCch
Confidence            45778999999999999999999887432211 00    10111111111  01111  111123678899999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       255 ~R~~~~~ll~  264 (267)
T cd06645         255 KRPTAEKLLQ  264 (267)
T ss_pred             hCcCHHHHhc
Confidence            9999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=98.89  E-value=4.8e-09  Score=75.48  Aligned_cols=77  Identities=16%  Similarity=0.249  Sum_probs=51.6

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      .++.++|+||||+++|++++|+.|+.....     ..... ........   .+.   .......+.+++..||+.+|++
T Consensus       178 ~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-----~~~~~-~~~~~~~~---~~~---~~~~~~~~~~~i~~~l~~~p~~  245 (277)
T cd06917         178 YYDTKADIWSLGITIYEMATGNPPYSDVDA-----FRAMM-LIPKSKPP---RLE---DNGYSKLLREFVAACLDEEPKE  245 (277)
T ss_pred             ccccchhHHHHHHHHHHHHhCCCCCCCCCh-----hhhhh-ccccCCCC---CCC---cccCCHHHHHHHHHHcCCCccc
Confidence            457899999999999999999999853221     11111 11111111   111   1112237889999999999999


Q ss_pred             CCCHHHHHH
Q 047465           86 RPTVYDVVS   94 (139)
Q Consensus        86 Rps~~~v~~   94 (139)
                      ||++.+++.
T Consensus       246 R~~~~~il~  254 (277)
T cd06917         246 RLSAEELLK  254 (277)
T ss_pred             CcCHHHHhh
Confidence            999999975

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=98.89  E-value=1.6e-09  Score=79.19  Aligned_cols=80  Identities=15%  Similarity=0.164  Sum_probs=52.3

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++|+||||++++++++|+.|+........     ... .......   .+..  +......+.+++.+||+.+|
T Consensus       189 ~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~-----~~~-~~~~~~~---~~~~--~~~~~~~~~~li~~~l~~~p  257 (297)
T cd06656         189 RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-----LYL-IATNGTP---ELQN--PERLSAVFRDFLNRCLEMDV  257 (297)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh-----eee-eccCCCC---CCCC--ccccCHHHHHHHHHHccCCh
Confidence            34567899999999999999999999853221100     000 0011111   1111  22222367889999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       258 ~~Rps~~~il~  268 (297)
T cd06656         258 DRRGSAKELLQ  268 (297)
T ss_pred             hhCcCHHHHhc
Confidence            99999999976

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=98.89  E-value=4.9e-09  Score=77.54  Aligned_cols=77  Identities=18%  Similarity=0.153  Sum_probs=50.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++|+||||+++|||++|+.|+.....  ..   ............         |......+.+++.+|++.+|
T Consensus       175 ~~~~~~~~DiwslG~il~el~~G~~pf~~~~~--~~---~~~~i~~~~~~~---------p~~~~~~~~~li~~~L~~dP  240 (324)
T cd05589         175 ETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE--EE---VFDSIVNDEVRY---------PRFLSREAISIMRRLLRRNP  240 (324)
T ss_pred             CCCCCcccchhhHHHHHHHHHhCCCCCCCCCH--HH---HHHHHHhCCCCC---------CCCCCHHHHHHHHHHhhcCH
Confidence            45678899999999999999999999853221  11   111111111111         22233478889999999999


Q ss_pred             CCCCC-----HHHHHH
Q 047465           84 DDRPT-----VYDVVS   94 (139)
Q Consensus        84 ~~Rps-----~~~v~~   94 (139)
                      .+||+     +.+++.
T Consensus       241 ~~R~~~~~~~~~~l~~  256 (324)
T cd05589         241 ERRLGSGEKDAEDVKK  256 (324)
T ss_pred             hHcCCCCCCCHHHHhh
Confidence            99994     555544

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=98.89  E-value=4.3e-09  Score=74.56  Aligned_cols=78  Identities=22%  Similarity=0.193  Sum_probs=52.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++|+||+|++++++++|+.|+.....     .... .....+...   .+    +......+..++..|++.+|
T Consensus       175 ~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~~-~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~~p  241 (256)
T cd08530         175 GRPYSYKSDIWSLGCLLYEMATFAPPFEARSM-----QDLR-YKVQRGKYP---PI----PPIYSQDLQNFIRSMLQVKP  241 (256)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHH-HHHhcCCCC---CC----chhhCHHHHHHHHHHcCCCc
Confidence            34567789999999999999999998853221     1111 111222222   11    11222378899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      ++||++.+++.
T Consensus       242 ~~Rp~~~~~l~  252 (256)
T cd08530         242 KLRPNCDKILA  252 (256)
T ss_pred             ccCCCHHHHhc
Confidence            99999999865

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=98.87  E-value=6.2e-09  Score=75.40  Aligned_cols=81  Identities=11%  Similarity=0.140  Sum_probs=50.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ++.++.++||||||++++|+++|+.||...... ............ .. .   .+    +......+.+++..|++.+|
T Consensus       171 ~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~-~~-~---~~----~~~~~~~~~~li~~~l~~~P  240 (280)
T cd05608         171 GEEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRILN-DS-V---TY----PDKFSPASKSFCEALLAKDP  240 (280)
T ss_pred             CCCCCccccHHHHHHHHHHHHhCCCCCCCCCcc-hhHHHHHHhhcc-cC-C---CC----cccCCHHHHHHHHHHhcCCH
Confidence            456788999999999999999999998543211 110111111111 10 0   00    22223378899999999999


Q ss_pred             CCCC-----CHHHHHH
Q 047465           84 DDRP-----TVYDVVS   94 (139)
Q Consensus        84 ~~Rp-----s~~~v~~   94 (139)
                      .+||     ++.+++.
T Consensus       241 ~~R~~~~~~~~~~~l~  256 (280)
T cd05608         241 EKRLGFRDGNCDGLRT  256 (280)
T ss_pred             HHhcCCCCCCHHHHhc
Confidence            9999     5566654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=98.87  E-value=6.9e-09  Score=74.68  Aligned_cols=86  Identities=17%  Similarity=0.059  Sum_probs=51.1

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHh-----------hccchhhhhhhhc--------cCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVA-----------NSHIFLCLWLIIN--------LRHG   65 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~d--------~~p~   65 (139)
                      +.++.++|+||+|++++||++|..|+.....  ...........           ....... ....+        ..+ 
T Consensus       174 ~~~~~~~Di~slGv~l~el~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-  249 (282)
T cd07831         174 GYYGPKMDIWAVGCVFFEILSLFPLFPGTNE--LDQIAKIHDVLGTPDAEVLKKFRKSRHMN-YNFPSKKGTGLRKLLP-  249 (282)
T ss_pred             CCCCcchhHHHHHHHHHHHHcCCcCCCCCCH--HHHHHHHHHHcCCCCHHHHHhhccccccc-ccCcccccccHHHHcc-
Confidence            4567899999999999999999988853211  11111111100           0000000 00000        000 


Q ss_pred             CCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           66 IYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        66 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      .....+.+++.+||+.+|.+||++.+++.
T Consensus       250 ~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         250 NASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             cccHHHHHHHHHHhccCcccccCHHHHhh
Confidence            11237889999999999999999999865

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.87  E-value=1.1e-09  Score=80.87  Aligned_cols=77  Identities=21%  Similarity=0.293  Sum_probs=54.0

Q ss_pred             ccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCCCC
Q 047465            9 IKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRPT   88 (139)
Q Consensus         9 ~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~Rps   88 (139)
                      .++||||+||+++||++|+.|+..+    .....+..........+   .+    |........++...|+..+|..||+
T Consensus       201 ~~sDiWSlGCtVvEM~Tg~~PW~~~----~~~~~~~~~ig~~~~~P---~i----p~~ls~~a~~Fl~~C~~~~p~~Rpt  269 (313)
T KOG0198|consen  201 RESDIWSLGCTVVEMLTGKPPWSEF----FEEAEALLLIGREDSLP---EI----PDSLSDEAKDFLRKCFKRDPEKRPT  269 (313)
T ss_pred             ccchhhhcCCEEEeccCCCCcchhh----cchHHHHHHHhccCCCC---CC----CcccCHHHHHHHHHHhhcCcccCcC
Confidence            4899999999999999999998643    11122222222223223   33    3333447889999999999999999


Q ss_pred             HHHHHHHH
Q 047465           89 VYDVVSML   96 (139)
Q Consensus        89 ~~~v~~~L   96 (139)
                      +.+++...
T Consensus       270 a~eLL~hp  277 (313)
T KOG0198|consen  270 AEELLEHP  277 (313)
T ss_pred             HHHHhhCh
Confidence            99998753

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.87  E-value=5.8e-09  Score=74.40  Aligned_cols=77  Identities=21%  Similarity=0.241  Sum_probs=51.8

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++|+|+||+++|+++++..++....     ......... .+...   .+    +......+.+++.+||..+|+
T Consensus       180 ~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~-----~~~~~~~~~-~~~~~---~~----~~~~~~~~~~li~~~l~~~p~  246 (260)
T cd08222         180 QGYDSKSDIWSLGCILYEMCCLAHAFEGQN-----FLSVVLRIV-EGPTP---SL----PETYSRQLNSIMQSMLNKDPS  246 (260)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHH-cCCCC---CC----cchhcHHHHHHHHHHhcCChh
Confidence            346778999999999999999998875321     111111111 12221   11    112223788899999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       247 ~Rp~~~~il~  256 (260)
T cd08222         247 LRPSAAEILR  256 (260)
T ss_pred             hCcCHHHHhh
Confidence            9999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=98.86  E-value=3.7e-09  Score=78.12  Aligned_cols=77  Identities=14%  Similarity=0.135  Sum_probs=52.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|+++|||++|+.|+.....  .   .............         |......+.+++..|++.+|
T Consensus       170 ~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~--~---~~~~~i~~~~~~~---------p~~~~~~~~~ll~~~L~~dp  235 (321)
T cd05591         170 ELEYGPSVDWWALGVLMYEMMAGQPPFEADNE--D---DLFESILHDDVLY---------PVWLSKEAVSILKAFMTKNP  235 (321)
T ss_pred             CCCCCCccceechhHHHHHHhcCCCCCCCCCH--H---HHHHHHHcCCCCC---------CCCCCHHHHHHHHHHhccCH
Confidence            44678899999999999999999999863221  1   1111111111111         33334478899999999999


Q ss_pred             CCCC-------CHHHHHH
Q 047465           84 DDRP-------TVYDVVS   94 (139)
Q Consensus        84 ~~Rp-------s~~~v~~   94 (139)
                      .+|+       ++.+++.
T Consensus       236 ~~R~~~~~~~~~~~~~~~  253 (321)
T cd05591         236 NKRLGCVASQGGEDAIKQ  253 (321)
T ss_pred             HHcCCCCCCCCCHHHHhc
Confidence            9999       6676664

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=98.86  E-value=1.1e-08  Score=74.24  Aligned_cols=88  Identities=15%  Similarity=0.085  Sum_probs=51.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhh-------hhc---------cCCCCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWL-------IIN---------LRHGIY   67 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d---------~~p~~~   67 (139)
                      +..++.++||||+|++++|+++|+.||.....  ......+...........++.       ...         ..+.+ 
T Consensus       183 ~~~~~~~~DiwslG~il~el~~g~~~f~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  259 (290)
T cd07862         183 QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD--VDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDI-  259 (290)
T ss_pred             CCCCCCccchHHHHHHHHHHHcCCCCcCCCCH--HHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCC-
Confidence            44678899999999999999999988854321  111111111100000000000       000         00111 


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           68 GRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        68 ~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ...+.+++..|++.+|++||++.+++.
T Consensus       260 ~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         260 DELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             CHHHHHHHHHHhccCchhcCCHHHHhc
Confidence            226678999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=98.86  E-value=4.8e-09  Score=77.65  Aligned_cols=78  Identities=13%  Similarity=0.101  Sum_probs=52.3

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .++.++.++||||+|++++|+++|+.|+.....  .   ...........     .+    |......+.+++..|++.+
T Consensus       168 ~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~--~---~~~~~~~~~~~-----~~----p~~~~~~~~~li~~~L~~d  233 (323)
T cd05595         168 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--E---RLFELILMEEI-----RF----PRTLSPEAKSLLAGLLKKD  233 (323)
T ss_pred             cCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH--H---HHHHHHhcCCC-----CC----CCCCCHHHHHHHHHHccCC
Confidence            345678899999999999999999999853221  1   11111111111     11    2223347889999999999


Q ss_pred             CCCCC-----CHHHHHH
Q 047465           83 ADDRP-----TVYDVVS   94 (139)
Q Consensus        83 p~~Rp-----s~~~v~~   94 (139)
                      |.+|+     ++.+++.
T Consensus       234 P~~R~~~~~~~~~~~l~  250 (323)
T cd05595         234 PKQRLGGGPSDAKEVME  250 (323)
T ss_pred             HHHhCCCCCCCHHHHHc
Confidence            99998     7777764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=98.86  E-value=6.4e-09  Score=75.78  Aligned_cols=77  Identities=14%  Similarity=0.019  Sum_probs=51.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|++++||++|+.|+.....     ........ .+..    .+    |......+.+++..|++.||
T Consensus       172 ~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~-----~~~~~~i~-~~~~----~~----~~~~~~~~~~li~~~l~~dp  237 (291)
T cd05612         172 SKGHNKAVDWWALGILIYEMLVGYPPFFDDNP-----FGIYEKIL-AGKL----EF----PRHLDLYAKDLIKKLLVVDR  237 (291)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHH-hCCc----CC----CccCCHHHHHHHHHHcCCCH
Confidence            34567899999999999999999999853211     11111111 1111    11    22223377889999999999


Q ss_pred             CCCCC-----HHHHHH
Q 047465           84 DDRPT-----VYDVVS   94 (139)
Q Consensus        84 ~~Rps-----~~~v~~   94 (139)
                      .+|++     +.+++.
T Consensus       238 ~~R~~~~~~~~~~~l~  253 (291)
T cd05612         238 TRRLGNMKNGADDVKN  253 (291)
T ss_pred             HHccCCccCCHHHHhc
Confidence            99995     777764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=98.86  E-value=7e-09  Score=73.30  Aligned_cols=78  Identities=21%  Similarity=0.298  Sum_probs=53.5

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++|+|++|++++++++|+.|+....     ......... .....   .+    +......+..++.+||..+|
T Consensus       177 ~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~-~~~~~---~~----~~~~~~~~~~~i~~~l~~~p  243 (258)
T cd08215         177 NKPYNYKSDIWSLGCVLYELCTLKHPFEGEN-----LLELALKIL-KGQYP---PI----PSQYSSELRNLVSSLLQKDP  243 (258)
T ss_pred             cCCCCccccHHHHHHHHHHHHcCCCCCCCCc-----HHHHHHHHh-cCCCC---CC----CCCCCHHHHHHHHHHcCCCh
Confidence            3457789999999999999999998875321     111111111 22222   11    22333478899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      ++||++.+++.
T Consensus       244 ~~Rp~~~~ll~  254 (258)
T cd08215         244 EERPSIAQILQ  254 (258)
T ss_pred             hhCcCHHHHhc
Confidence            99999999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=98.86  E-value=7.1e-09  Score=73.78  Aligned_cols=81  Identities=19%  Similarity=0.188  Sum_probs=53.2

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +.++.++|+|+||++++++++|+.|+......  ........ .......   .+ +  .......+..++..|+..+|.
T Consensus       175 ~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--~~~~~~~~-~~~~~~~---~~-~--~~~~~~~l~~li~~~l~~~p~  245 (264)
T cd06623         175 ESYSYAADIWSLGLTLLECALGKFPFLPPGQP--SFFELMQA-ICDGPPP---SL-P--AEEFSPEFRDFISACLQKDPK  245 (264)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCcccccc--CHHHHHHH-HhcCCCC---CC-C--cccCCHHHHHHHHHHccCChh
Confidence            45678899999999999999999998543210  11111111 1111111   11 1  111233788899999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       246 ~R~~~~~ll~  255 (264)
T cd06623         246 KRPSAAELLQ  255 (264)
T ss_pred             hCCCHHHHHh
Confidence            9999999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=98.86  E-value=3.5e-09  Score=78.33  Aligned_cols=77  Identities=10%  Similarity=0.072  Sum_probs=52.0

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|++++||++|+.||.....  .....    .+..+..    .+    |......+.+++..|++.+|
T Consensus       169 ~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--~~~~~----~~~~~~~----~~----p~~~~~~~~~li~~~L~~dP  234 (323)
T cd05571         169 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFE----LILMEEI----RF----PRTLSPEAKSLLAGLLKKDP  234 (323)
T ss_pred             CCCCCccccCcccchhhhhhhcCCCCCCCCCH--HHHHH----HHHcCCC----CC----CCCCCHHHHHHHHHHccCCH
Confidence            45678899999999999999999999853211  11111    1111111    11    22223378899999999999


Q ss_pred             CCCC-----CHHHHHH
Q 047465           84 DDRP-----TVYDVVS   94 (139)
Q Consensus        84 ~~Rp-----s~~~v~~   94 (139)
                      ++||     ++.+++.
T Consensus       235 ~~R~~~~~~~~~~ll~  250 (323)
T cd05571         235 KQRLGGGPEDAKEIME  250 (323)
T ss_pred             HHcCCCCCCCHHHHHc
Confidence            9999     7888764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=98.85  E-value=5.9e-09  Score=77.15  Aligned_cols=77  Identities=14%  Similarity=0.070  Sum_probs=51.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|++++||++|+.||.....     ........ .+..    .+    |......+.+++..|++.+|
T Consensus       174 ~~~~~~~~DiwslG~il~ell~G~~pf~~~~~-----~~~~~~~~-~~~~----~~----~~~~~~~~~~li~~~l~~~p  239 (323)
T cd05584         174 RSGHGKAVDWWSLGALMYDMLTGAPPFTAENR-----KKTIDKIL-KGKL----NL----PPYLTPEARDLLKKLLKRNP  239 (323)
T ss_pred             CCCCCCcceecccHHHHHHHhcCCCCCCCCCH-----HHHHHHHH-cCCC----CC----CCCCCHHHHHHHHHHcccCH
Confidence            34567899999999999999999999853221     11111111 1111    11    22223378899999999999


Q ss_pred             CCCC-----CHHHHHH
Q 047465           84 DDRP-----TVYDVVS   94 (139)
Q Consensus        84 ~~Rp-----s~~~v~~   94 (139)
                      .+||     +..+++.
T Consensus       240 ~~R~~~~~~~~~~l~~  255 (323)
T cd05584         240 SSRLGAGPGDAAEVQS  255 (323)
T ss_pred             hHcCCCCCCCHHHHhc
Confidence            9999     7777765

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=98.85  E-value=6.1e-09  Score=75.63  Aligned_cols=81  Identities=12%  Similarity=0.082  Sum_probs=51.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|+++||+++|+.||......  .....+...+.... .   ..    +......+.+++..||+.||
T Consensus       175 ~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~-~---~~----~~~~~~~~~~li~~~l~~~P  244 (285)
T cd05605         175 NERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK--VKREEVERRVKEDQ-E---EY----SEKFSEAARSICRQLLTKDP  244 (285)
T ss_pred             CCCCCccccchhHHHHHHHHHHCCCCCCCCchh--hHHHHHHHHhhhcc-c---cc----CcccCHHHHHHHHHHccCCH
Confidence            455788999999999999999999998642211  11111111111111 0   10    11122378899999999999


Q ss_pred             CCCC-----CHHHHHH
Q 047465           84 DDRP-----TVYDVVS   94 (139)
Q Consensus        84 ~~Rp-----s~~~v~~   94 (139)
                      .+||     ++.+++.
T Consensus       245 ~~R~~~~~~~~~~l~~  260 (285)
T cd05605         245 GFRLGCRGEGAEEVKA  260 (285)
T ss_pred             HHhcCCCCCCHHHHhc
Confidence            9999     7777754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=98.85  E-value=7.1e-09  Score=76.54  Aligned_cols=76  Identities=14%  Similarity=0.081  Sum_probs=50.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|+++|||++|+.||.....  .   ....... ... .   ..    |......+.+++..||+.+|
T Consensus       170 ~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~--~---~~~~~i~-~~~-~---~~----~~~~~~~~~~ll~~~l~~~P  235 (316)
T cd05592         170 GQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE--D---ELFDSIL-NDR-P---HF----PRWISKEAKDCLSKLFERDP  235 (316)
T ss_pred             CCCCCCcccchhHHHHHHHHHhCCCCCCCCCH--H---HHHHHHH-cCC-C---CC----CCCCCHHHHHHHHHHccCCH
Confidence            45678899999999999999999999853221  1   1111111 111 1   11    22233378889999999999


Q ss_pred             CCCCCHH-HHH
Q 047465           84 DDRPTVY-DVV   93 (139)
Q Consensus        84 ~~Rps~~-~v~   93 (139)
                      .+||++. +++
T Consensus       236 ~~R~~~~~~l~  246 (316)
T cd05592         236 TKRLGVDGDIR  246 (316)
T ss_pred             HHcCCChHHHH
Confidence            9999875 443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=98.85  E-value=5.6e-09  Score=77.14  Aligned_cols=76  Identities=16%  Similarity=0.073  Sum_probs=50.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|+++||+++|+.|+.....  ......    +.... .   . .   |......+.++..+|++.+|
T Consensus       170 ~~~~~~~~DvwslG~il~el~~G~~pf~~~~~--~~~~~~----i~~~~-~---~-~---~~~~~~~~~~li~~~l~~~P  235 (316)
T cd05619         170 GQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE--EELFQS----IRMDN-P---C-Y---PRWLTREAKDILVKLFVREP  235 (316)
T ss_pred             CCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH--HHHHHH----HHhCC-C---C-C---CccCCHHHHHHHHHHhccCH
Confidence            45678899999999999999999999853221  111111    11111 0   0 0   22223377889999999999


Q ss_pred             CCCCCHH-HHH
Q 047465           84 DDRPTVY-DVV   93 (139)
Q Consensus        84 ~~Rps~~-~v~   93 (139)
                      .+|+++. ++.
T Consensus       236 ~~R~~~~~~l~  246 (316)
T cd05619         236 ERRLGVKGDIR  246 (316)
T ss_pred             hhcCCChHHHH
Confidence            9999997 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=98.85  E-value=6.3e-09  Score=77.01  Aligned_cols=27  Identities=30%  Similarity=0.447  Sum_probs=24.3

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCc
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEF   32 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~   32 (139)
                      .++.++||||||++++|+++|+.||..
T Consensus       186 ~~~~~~DiwslG~il~el~~g~~pf~~  212 (327)
T cd08227         186 GYDAKSDIYSVGITACELANGHVPFKD  212 (327)
T ss_pred             CCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence            477899999999999999999999853

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=98.85  E-value=1.1e-08  Score=75.40  Aligned_cols=79  Identities=18%  Similarity=0.244  Sum_probs=51.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      .+.++.++||||||++++++++|..|+.....     ......... ....   ....  +.. ...+..++.+||+.+|
T Consensus       194 ~~~~~~~sDv~slGvil~el~~g~~p~~~~~~-----~~~~~~~~~-~~~~---~~~~--~~~-~~~l~~li~~~l~~~P  261 (313)
T cd06633         194 EGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSALYHIAQ-NDSP---TLQS--NEW-TDSFRGFVDYCLQKIP  261 (313)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHh-cCCC---CCCc--ccc-CHHHHHHHHHHccCCh
Confidence            35578899999999999999999998743211     111111111 1111   1111  111 2267889999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       262 ~~Rp~~~~~l~  272 (313)
T cd06633         262 QERPASAELLR  272 (313)
T ss_pred             hhCcCHHHHhc
Confidence            99999998874

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=98.85  E-value=9.2e-09  Score=73.05  Aligned_cols=84  Identities=17%  Similarity=0.165  Sum_probs=53.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +...+.++|+||+|+++++|++|+.|+.....  .................   ....  .......+.+++..|++.+|
T Consensus       173 ~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~l~~li~~~l~~~p  245 (260)
T PF00069_consen  173 GKKYTRKSDIWSLGIILYELLTGKLPFEESNS--DDQLEIIEKILKRPLPS---SSQQ--SREKSEELRDLIKKMLSKDP  245 (260)
T ss_dssp             TSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH--HHHHHHHHHHHHTHHHH---HTTS--HTTSHHHHHHHHHHHSSSSG
T ss_pred             cccccccccccccccccccccccccccccccc--hhhhhhhhhcccccccc---cccc--cchhHHHHHHHHHHHccCCh
Confidence            45788999999999999999999998864311  01111111111111111   1100  11112488999999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.++++
T Consensus       246 ~~R~~~~~l~~  256 (260)
T PF00069_consen  246 EQRPSAEELLK  256 (260)
T ss_dssp             GGSTTHHHHHT
T ss_pred             hHCcCHHHHhc
Confidence            99999998864

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>PTZ00284 protein kinase; Provisional

Probab=98.85  E-value=3.1e-09  Score=82.49  Aligned_cols=30  Identities=23%  Similarity=0.418  Sum_probs=26.2

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEF   32 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~   32 (139)
                      .+..++.++|||||||++|||++|+.||+.
T Consensus       318 ~~~~~~~~~DiwSlGvil~elltG~~pf~~  347 (467)
T PTZ00284        318 LGLGWMYSTDMWSMGCIIYELYTGKLLYDT  347 (467)
T ss_pred             hcCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            345688899999999999999999999864

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=98.84  E-value=4.7e-09  Score=77.62  Aligned_cols=88  Identities=15%  Similarity=0.057  Sum_probs=50.9

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHh-----------hccchh-hhhhhhccCCC-------
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVA-----------NSHIFL-CLWLIINLRHG-------   65 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-~~~~~~d~~p~-------   65 (139)
                      ..++.++||||+|++++||++|+.||.....  ......+....           ...... .+..+....+.       
T Consensus       183 ~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  260 (338)
T cd07859         183 SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV--VHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFP  260 (338)
T ss_pred             cccCchhHHHHHHHHHHHHHcCCCCCCCCCh--HHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcC
Confidence            4578899999999999999999988853221  01000000000           000000 00000000000       


Q ss_pred             CCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           66 IYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        66 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      .....+.+++..||+.+|.+||++.+++.
T Consensus       261 ~~~~~~~~li~~~l~~~P~~Rpt~~e~l~  289 (338)
T cd07859         261 NADPLALRLLERLLAFDPKDRPTAEEALA  289 (338)
T ss_pred             CCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence            01126788999999999999999999985

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=98.84  E-value=6.9e-09  Score=73.72  Aligned_cols=79  Identities=11%  Similarity=-0.010  Sum_probs=51.7

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCC--HHHHHHHHHHhcccC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIY--GRTTGHWTLLCAQES   82 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~--~~~~~~l~~~C~~~~   82 (139)
                      ...+.++||||||++++++++|..|+.....     ........ .+..    ..    +...  ...+..++..||+.+
T Consensus       176 ~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~-~~~~----~~----~~~~~~~~~~~~~i~~~l~~~  241 (265)
T cd05579         176 QGHSKTVDWWSLGCILYEFLVGIPPFHGETP-----EEIFQNIL-NGKI----EW----PEDVEVSDEAIDLISKLLVPD  241 (265)
T ss_pred             CCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHh-cCCc----CC----CccccCCHHHHHHHHHHhcCC
Confidence            3466789999999999999999999853221     11111111 1111    11    1111  337889999999999


Q ss_pred             CCCCCCHHHHHHHHh
Q 047465           83 ADDRPTVYDVVSMLT   97 (139)
Q Consensus        83 p~~Rps~~~v~~~L~   97 (139)
                      |++||++..+.+.|+
T Consensus       242 p~~Rpt~~~~~~~l~  256 (265)
T cd05579         242 PEKRLGAKSIEEIKN  256 (265)
T ss_pred             HhhcCCCccHHHHhc
Confidence            999999955555444

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.84  E-value=1e-08  Score=74.28  Aligned_cols=83  Identities=14%  Similarity=0.086  Sum_probs=53.8

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDR   86 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~R   86 (139)
                      .+.++|+|+||++++|+++|..|+..... ................     ..    +......+.+++.+||+.+|++|
T Consensus       185 ~~~~~Dv~slG~il~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~-----~~----~~~~~~~l~~li~~~l~~~p~~R  254 (288)
T cd05583         185 HDKAVDWWSLGVLTFELLTGASPFTVDGE-QNSQSEISRRILKSKP-----PF----PKTMSAEARDFIQKLLEKDPKKR  254 (288)
T ss_pred             CcchhhhHHHHHHHHHHHhCCCCcccCcc-cchHHHHHHHHHccCC-----CC----CcccCHHHHHHHHHHhcCCHhhc
Confidence            57789999999999999999998743211 1111111111111111     11    22223378889999999999999


Q ss_pred             CCHHHHHHHHhcc
Q 047465           87 PTVYDVVSMLTNE   99 (139)
Q Consensus        87 ps~~~v~~~L~~~   99 (139)
                      |++.++...|+..
T Consensus       255 ~t~~~~~~~l~~~  267 (288)
T cd05583         255 LGANGADEIKNHP  267 (288)
T ss_pred             cCcchHHHHhcCc
Confidence            9998887766553

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=98.84  E-value=6.2e-09  Score=77.28  Aligned_cols=77  Identities=14%  Similarity=0.042  Sum_probs=51.2

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|+++|||++|+.||.....     .. ....+..+..    .+    |......+.+++..||+.||
T Consensus       189 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~-----~~-~~~~i~~~~~----~~----p~~~~~~~~~li~~~L~~dP  254 (329)
T PTZ00263        189 SKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP-----FR-IYEKILAGRL----KF----PNWFDGRARDLVKGLLQTDH  254 (329)
T ss_pred             CCCCCCcceeechHHHHHHHHcCCCCCCCCCH-----HH-HHHHHhcCCc----CC----CCCCCHHHHHHHHHHhhcCH
Confidence            44568899999999999999999999853211     11 1111212221    11    22233378899999999999


Q ss_pred             CCCCC-----HHHHHH
Q 047465           84 DDRPT-----VYDVVS   94 (139)
Q Consensus        84 ~~Rps-----~~~v~~   94 (139)
                      .+|++     +.+++.
T Consensus       255 ~~R~~~~~~~~~~ll~  270 (329)
T PTZ00263        255 TKRLGTLKGGVADVKN  270 (329)
T ss_pred             HHcCCCCCCCHHHHhc
Confidence            99986     577663

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.83  E-value=9.8e-09  Score=73.99  Aligned_cols=89  Identities=7%  Similarity=-0.062  Sum_probs=49.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhh-------hhhccC-CC-C------CH
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLW-------LIINLR-HG-I------YG   68 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~d~~-p~-~------~~   68 (139)
                      +..++.++|+||||++++||++|+.++.....  ......+...........+.       ...... +. .      ..
T Consensus       180 ~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (287)
T cd07838         180 QSSYATPVDMWSVGCIFAELFRRRPLFRGTSE--ADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEIC  257 (287)
T ss_pred             cCCCCCcchhhhHHHHHHHHHhCCCcccCCCh--HHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhh
Confidence            34567899999999999999999887753221  11111111110000000000       000000 00 0      01


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           69 RTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        69 ~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ..+.+++.+||+.+|.+||++.+++.
T Consensus       258 ~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         258 EEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             HHHHHHHHHHhccCCccCCCHHHHhc
Confidence            15678899999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=98.83  E-value=1.5e-08  Score=74.11  Aligned_cols=86  Identities=14%  Similarity=0.056  Sum_probs=50.7

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccc---hh-------------------hhhhhhccC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHI---FL-------------------CLWLIINLR   63 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~~~~d~~   63 (139)
                      .++.++||||+|++++||++|+.||..... ................   ..                   .+....+  
T Consensus       180 ~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  256 (303)
T cd07869         180 EYSTCLDMWGVGCIFVEMIQGVAAFPGMKD-IQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWN--  256 (303)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCcc-HHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhh--
Confidence            467889999999999999999999864322 1111111111100000   00                   0000000  


Q ss_pred             CCCCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           64 HGIYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        64 p~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      .......+.+++..|++.+|.+||++.+++.
T Consensus       257 ~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         257 KLSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             ccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence            0011125778999999999999999998864

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=98.83  E-value=7.6e-09  Score=76.52  Aligned_cols=72  Identities=14%  Similarity=0.108  Sum_probs=48.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|+++||+++|+.||.....     .... ..+..+..      ..  |......+.+++..|++.+|
T Consensus       170 ~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-----~~~~-~~i~~~~~------~~--~~~~~~~~~~li~~~L~~dP  235 (320)
T cd05590         170 EMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE-----DDLF-EAILNDEV------VY--PTWLSQDAVDILKAFMTKNP  235 (320)
T ss_pred             CCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-----HHHH-HHHhcCCC------CC--CCCCCHHHHHHHHHHcccCH
Confidence            44578899999999999999999999853221     1111 11111111      11  32233378899999999999


Q ss_pred             CCCCCH
Q 047465           84 DDRPTV   89 (139)
Q Consensus        84 ~~Rps~   89 (139)
                      .+|++.
T Consensus       236 ~~R~~~  241 (320)
T cd05590         236 TMRLGS  241 (320)
T ss_pred             HHCCCC
Confidence            999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=98.83  E-value=9.6e-09  Score=75.01  Aligned_cols=80  Identities=14%  Similarity=0.112  Sum_probs=51.5

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++|+||+|++++++++|..|+.....  ......    .......   .+..  .......+..++.+||+.+|
T Consensus       190 ~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~--~~~~~~----~~~~~~~---~~~~--~~~~~~~l~~li~~~l~~~P  258 (292)
T cd06657         190 RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKM----IRDNLPP---KLKN--LHKVSPSLKGFLDRLLVRDP  258 (292)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHH----HHhhCCc---ccCC--cccCCHHHHHHHHHHHhCCc
Confidence            34567899999999999999999998752211  111111    1111111   1100  11112267889999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       259 ~~R~~~~~ll~  269 (292)
T cd06657         259 AQRATAAELLK  269 (292)
T ss_pred             ccCcCHHHHhc
Confidence            99999999876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=98.83  E-value=6.6e-09  Score=76.16  Aligned_cols=88  Identities=15%  Similarity=0.218  Sum_probs=49.8

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHh----hccchhh----hhh----hhc-----cCCCC--
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVA----NSHIFLC----LWL----IIN-----LRHGI--   66 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~----~~~----~~d-----~~p~~--   66 (139)
                      .++.++|+||||+++||+++|+.||...... ...........    .......    ...    ..+     ..+..  
T Consensus       186 ~~~~~~Diws~G~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (314)
T cd08216         186 GYNEKSDIYSVGITACELANGHVPFKDMPAT-QMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYT  264 (314)
T ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchh
Confidence            3678899999999999999999998543211 11111110000    0000000    000    000     00000  


Q ss_pred             --CHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           67 --YGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        67 --~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                        ....+.+++..||+.+|++||++.+++.
T Consensus       265 ~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  294 (314)
T cd08216         265 RTFSEHFHQFVELCLQRDPESRPSASQLLN  294 (314)
T ss_pred             hHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence              0115778999999999999999998875

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.82  E-value=1e-08  Score=77.93  Aligned_cols=83  Identities=18%  Similarity=0.259  Sum_probs=53.5

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhc-cCCCCCHHHHHHHHHHhcccCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIIN-LRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      |+.|+|||||||...|+.+|.-||..+.+.+.     ....+.......+...++ .+-...+..+.++.-.|++.||.+
T Consensus       209 YdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv-----Ll~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~k  283 (516)
T KOG0582|consen  209 YDFKADIWSFGITACELAHGHAPFSKYPPMKV-----LLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSK  283 (516)
T ss_pred             ccchhhhhhhhHHHHHHhcCCCCcccCChHHH-----HHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCccc
Confidence            78899999999999999999999975544211     111121111000001111 001122238889999999999999


Q ss_pred             CCCHHHHHH
Q 047465           86 RPTVYDVVS   94 (139)
Q Consensus        86 Rps~~~v~~   94 (139)
                      ||++++++.
T Consensus       284 RptAskLlk  292 (516)
T KOG0582|consen  284 RPTASKLLK  292 (516)
T ss_pred             CCCHHHHhc
Confidence            999999985

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=98.82  E-value=6.9e-09  Score=77.02  Aligned_cols=77  Identities=10%  Similarity=0.072  Sum_probs=52.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|+++||+++|+.||.....  .   ........ ...    .+    |......+.+++.+|++.+|
T Consensus       169 ~~~~~~~~DiwslGvil~elltG~~Pf~~~~~--~---~~~~~~~~-~~~----~~----p~~~~~~~~~li~~~L~~dP  234 (328)
T cd05593         169 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--E---KLFELILM-EDI----KF----PRTLSADAKSLLSGLLIKDP  234 (328)
T ss_pred             CCCCCccCCccccchHHHHHhhCCCCCCCCCH--H---HHHHHhcc-CCc----cC----CCCCCHHHHHHHHHHcCCCH
Confidence            45678899999999999999999999853211  1   11111111 111    11    22233378899999999999


Q ss_pred             CCCC-----CHHHHHH
Q 047465           84 DDRP-----TVYDVVS   94 (139)
Q Consensus        84 ~~Rp-----s~~~v~~   94 (139)
                      .+|+     ++.+++.
T Consensus       235 ~~R~~~~~~~~~~il~  250 (328)
T cd05593         235 NKRLGGGPDDAKEIMR  250 (328)
T ss_pred             HHcCCCCCCCHHHHhc
Confidence            9997     7888875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=98.82  E-value=1.7e-08  Score=70.34  Aligned_cols=79  Identities=15%  Similarity=0.098  Sum_probs=52.2

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCC-CHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGI-YGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~-~~~~~~~l~~~C~~~~p   83 (139)
                      ..++.++|+|++|+++++++++..|+..... ...    ...........    ...  ... ....+..++.+|+..+|
T Consensus       161 ~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~-~~~----~~~~~~~~~~~----~~~--~~~~~~~~~~~~i~~~l~~~p  229 (244)
T smart00220      161 KGYGKAVDVWSLGVILYELLTGKPPFPGDDQ-LLE----LFKKIGKPKPP----FPP--PEWKISPEAKDLIRKLLVKDP  229 (244)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-HHH----HHHHHhccCCC----Ccc--ccccCCHHHHHHHHHHccCCc
Confidence            4567899999999999999999988753211 111    11112112111    000  110 22378899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      ++||++.+++.
T Consensus       230 ~~Rp~~~~~~~  240 (244)
T smart00220      230 EKRLTAEEALQ  240 (244)
T ss_pred             hhccCHHHHhh
Confidence            99999999875

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=98.81  E-value=1.1e-08  Score=73.94  Aligned_cols=83  Identities=14%  Similarity=0.175  Sum_probs=49.0

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhc-----------------cchhhhhhhhc------c
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANS-----------------HIFLCLWLIIN------L   62 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~d------~   62 (139)
                      .++.++||||||++++|+++|+.++.....  .............                 ...+   ....      .
T Consensus       177 ~~~~~~Dv~slG~~l~el~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  251 (286)
T cd07846         177 KYGRAVDIWAVGCLVTEMLTGEPLFPGDSD--IDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLP---EVKEIEPLEKR  251 (286)
T ss_pred             ccCchHhHHHHHHHHHHHHcCCCCCCCCch--HHHHHHHHHHhCCCchhhHHHhccchHhhccccc---cccCcchHHHh
Confidence            467889999999999999999887743211  1100000000000                 0000   0000      0


Q ss_pred             CCCCCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           63 RHGIYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        63 ~p~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      .+.+ ...+.+++.+||+.+|.+||++.++++
T Consensus       252 ~~~~-~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         252 FPKL-SGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             CCCc-CHHHHHHHHHHhcCCcccchhHHHHhc
Confidence            0111 126888999999999999999998865

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=98.81  E-value=1.2e-08  Score=74.85  Aligned_cols=90  Identities=14%  Similarity=0.266  Sum_probs=51.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccch-----------------hhhhh----hhc-
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIF-----------------LCLWL----IIN-   61 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~----~~d-   61 (139)
                      +..++.++|+||||++++++++|+.|+......  ...............                 ..+.+    +.. 
T Consensus       172 ~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (308)
T cd06615         172 GTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK--ELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNE  249 (308)
T ss_pred             CCCCCccchHHHHHHHHHHHHhCCCCCCCcchh--hHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcC
Confidence            445788999999999999999999987532111  000000000000000                 00000    000 


Q ss_pred             cCCCC----CHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047465           62 LRHGI----YGRTTGHWTLLCAQESADDRPTVYDVVSM   95 (139)
Q Consensus        62 ~~p~~----~~~~~~~l~~~C~~~~p~~Rps~~~v~~~   95 (139)
                      .+|..    ....+.+++.+||..+|++||++.+++..
T Consensus       250 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         250 PPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH  287 (308)
T ss_pred             CCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            00111    22368899999999999999999998754

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=98.81  E-value=1.1e-08  Score=85.21  Aligned_cols=76  Identities=20%  Similarity=0.164  Sum_probs=51.6

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      .++.++|||||||++|||++|+.||.....    ..... ..+......     .   .......+.+++..||+.+|.+
T Consensus       219 ~~s~KSDVWSLG~ILYELLTGk~PF~~~~~----~~qli-~~lk~~p~l-----p---i~~~S~eL~dLI~~~L~~dPee  285 (1021)
T PTZ00266        219 SYDDKSDMWALGCIIYELCSGKTPFHKANN----FSQLI-SELKRGPDL-----P---IKGKSKELNILIKNLLNLSAKE  285 (1021)
T ss_pred             CCCchhHHHHHHHHHHHHHHCCCCCCcCCc----HHHHH-HHHhcCCCC-----C---cCCCCHHHHHHHHHHhcCChhH
Confidence            478899999999999999999999853221    11111 111111111     0   1111237889999999999999


Q ss_pred             CCCHHHHHH
Q 047465           86 RPTVYDVVS   94 (139)
Q Consensus        86 Rps~~~v~~   94 (139)
                      ||++.+++.
T Consensus       286 RPSa~QlL~  294 (1021)
T PTZ00266        286 RPSALQCLG  294 (1021)
T ss_pred             CcCHHHHhc
Confidence            999999983

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=98.81  E-value=1.6e-08  Score=72.97  Aligned_cols=87  Identities=13%  Similarity=0.141  Sum_probs=50.7

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhh------------ccchh--hhhhhhc------cCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVAN------------SHIFL--CLWLIIN------LRHG   65 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~--~~~~~~d------~~p~   65 (139)
                      .++.++|+||||+++|++++|+.++.....  ............            .....  .+.+..+      .-+.
T Consensus       178 ~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (288)
T cd07833         178 NYGKPVDVWAIGCIMAELLDGEPLFPGDSD--IDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPG  255 (288)
T ss_pred             CcCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCC
Confidence            567899999999999999999988753211  110000000000            00000  0000000      0011


Q ss_pred             CCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           66 IYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        66 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      .....+.+++..||..+|++||++.+++.
T Consensus       256 ~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         256 KVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             ccchHHHHHHHHHhccCchhcccHHHHhc
Confidence            22337889999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=98.81  E-value=1.5e-08  Score=73.04  Aligned_cols=80  Identities=15%  Similarity=0.156  Sum_probs=51.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++|+||+|++++|+++|+.|+............+... .  ..     ....  +......+..++..|++.+|
T Consensus       180 ~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~--~~-----~~~~--~~~~~~~~~~li~~~l~~~p  249 (267)
T PHA03390        180 GHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKR-Q--QK-----KLPF--IKNVSKNANDFVQSMLKYNI  249 (267)
T ss_pred             CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHh-h--cc-----cCCc--ccccCHHHHHHHHHHhccCh
Confidence            4567889999999999999999999986322211111111111 1  11     1111  22223378889999999999


Q ss_pred             CCCCC-HHHHH
Q 047465           84 DDRPT-VYDVV   93 (139)
Q Consensus        84 ~~Rps-~~~v~   93 (139)
                      .+|++ +++++
T Consensus       250 ~~R~~~~~~~l  260 (267)
T PHA03390        250 NYRLTNYNEII  260 (267)
T ss_pred             hhCCchHHHHh
Confidence            99995 68776

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=98.80  E-value=1e-08  Score=75.67  Aligned_cols=76  Identities=13%  Similarity=0.052  Sum_probs=50.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|++++||++|+.||.....  ....    ..+.... .   ..    |......+.+++..|++.+|
T Consensus       170 ~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~--~~~~----~~~~~~~-~---~~----~~~~~~~~~~li~~~l~~dP  235 (316)
T cd05620         170 GLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE--DELF----ESIRVDT-P---HY----PRWITKESKDILEKLFERDP  235 (316)
T ss_pred             CCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--HHHH----HHHHhCC-C---CC----CCCCCHHHHHHHHHHccCCH
Confidence            45678899999999999999999999853211  1111    1111111 1   11    22233378889999999999


Q ss_pred             CCCCCHH-HHH
Q 047465           84 DDRPTVY-DVV   93 (139)
Q Consensus        84 ~~Rps~~-~v~   93 (139)
                      .+|+++. ++.
T Consensus       236 ~~R~~~~~~~~  246 (316)
T cd05620         236 TRRLGVVGNIR  246 (316)
T ss_pred             HHcCCChHHHH
Confidence            9999985 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=98.80  E-value=1.1e-08  Score=73.90  Aligned_cols=88  Identities=9%  Similarity=-0.006  Sum_probs=51.0

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhh-------hhc---------cCCCCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWL-------IIN---------LRHGIY   67 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d---------~~p~~~   67 (139)
                      +..++.++||||+|++++|+++|+.+|.....  ..................++.       ...         ..+.. 
T Consensus       181 ~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  257 (288)
T cd07863         181 QSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE--ADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEI-  257 (288)
T ss_pred             CCCCCCcchhhhHHHHHHHHHhCCcCcCCCCH--HHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCc-
Confidence            45678899999999999999999988743221  111111111110000000000       000         00111 


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           68 GRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        68 ~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ...+.+++.+|++.||++||++.+++.
T Consensus       258 ~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         258 EESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             CHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            126778999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.80  E-value=1.4e-08  Score=82.22  Aligned_cols=81  Identities=14%  Similarity=0.095  Sum_probs=53.3

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccc-hhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHI-FLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      .+..++.++|||||||++||+++|+.||.....     ............ .+   .. .  . .....+..++..||..
T Consensus       553 ~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~-----~~~~~~il~~~~~~p---~~-~--~-~~~~~~~~~l~~lL~~  620 (669)
T cd05610         553 LGKPHGPAVDWWALGVCLFEFLTGIPPFNDETP-----QQVFQNILNRDIPWP---EG-E--E-KLSVNAQNAIEILLTM  620 (669)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHhcCCCCC---cc-c--c-cCCHHHHHHHHHHccc
Confidence            445678899999999999999999999853211     111111111111 11   11 0  1 1122677888899999


Q ss_pred             CCCCCCCHHHHHHH
Q 047465           82 SADDRPTVYDVVSM   95 (139)
Q Consensus        82 ~p~~Rps~~~v~~~   95 (139)
                      +|.+||++.+++..
T Consensus       621 dP~~R~ta~e~l~h  634 (669)
T cd05610         621 DPTKRAGLKELKQH  634 (669)
T ss_pred             ChhHCcCHHHHHhC
Confidence            99999999999864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=98.80  E-value=1.5e-08  Score=73.56  Aligned_cols=81  Identities=11%  Similarity=0.096  Sum_probs=50.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ++.++.++|+||+|++++++++|..|+......  .....+.........    . .   +......+.+++..|++.+|
T Consensus       175 ~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~--~~~~~~~~~~~~~~~----~-~---~~~~~~~~~~li~~~l~~~P  244 (285)
T cd05632         175 NQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEK--VKREEVDRRVLETEE----V-Y---SAKFSEEAKSICKMLLTKDP  244 (285)
T ss_pred             CCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhhhcccc----c-c---CccCCHHHHHHHHHHccCCH
Confidence            456788999999999999999999998532211  111111111111110    0 0   11112267889999999999


Q ss_pred             CCCCC-----HHHHHH
Q 047465           84 DDRPT-----VYDVVS   94 (139)
Q Consensus        84 ~~Rps-----~~~v~~   94 (139)
                      .+||+     +.+++.
T Consensus       245 ~~R~~~~~~~~~~l~~  260 (285)
T cd05632         245 KQRLGCQEEGAGEVKR  260 (285)
T ss_pred             hHcCCCcccChHHHHc
Confidence            99999     555554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=98.80  E-value=2.7e-08  Score=71.55  Aligned_cols=86  Identities=14%  Similarity=0.015  Sum_probs=50.3

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccch---hhhh--------hhhc--------cCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIF---LCLW--------LIIN--------LRHGI   66 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--------~~~d--------~~p~~   66 (139)
                      ..+.++|+||+|++++++++|+.++.....  ................   ..+.        ...+        ..+. 
T Consensus       175 ~~~~~~Di~slG~~l~~l~tg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  251 (283)
T cd05118         175 GYSTPVDIWSVGCIFAELLSRRPLFPGKSE--IDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPN-  251 (283)
T ss_pred             CCCchhHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhh-
Confidence            567899999999999999999988753221  1111111111100000   0000        0000        0000 


Q ss_pred             CHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           67 YGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        67 ~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ....+..++..||+.+|.+||++.+++.
T Consensus       252 ~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         252 ASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             hCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence            1127789999999999999999999875

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=98.79  E-value=1.4e-08  Score=74.66  Aligned_cols=79  Identities=11%  Similarity=0.098  Sum_probs=50.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||||+++|++++|+.|+..... ...+    ........     .+..  .......+.+++.+||+.+|
T Consensus       206 ~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~-~~~~----~~~~~~~~-----~~~~--~~~~~~~~~~li~~~l~~~p  273 (316)
T cd05574         206 GDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR-DETF----SNILKKEV-----TFPG--SPPVSSSARDLIRKLLVKDP  273 (316)
T ss_pred             CCCCCchHHHHHHHHHHHHHhhCCCCCCCCch-HHHH----HHHhcCCc-----cCCC--ccccCHHHHHHHHHHccCCH
Confidence            34567899999999999999999999853221 1111    11111111     1111  11123378899999999999


Q ss_pred             CCCCC----HHHHHH
Q 047465           84 DDRPT----VYDVVS   94 (139)
Q Consensus        84 ~~Rps----~~~v~~   94 (139)
                      ++||+    +.+++.
T Consensus       274 ~~R~s~~~~~~~ll~  288 (316)
T cd05574         274 SKRLGSKRGAAEIKQ  288 (316)
T ss_pred             hHCCCchhhHHHHHc
Confidence            99999    665554

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=98.79  E-value=2.2e-08  Score=71.60  Aligned_cols=81  Identities=16%  Similarity=0.253  Sum_probs=51.8

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++|+|++|++++++++|+.|+......  ................   .+    +......+.+++.+|+..+|.
T Consensus       183 ~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~i~~~l~~~p~  253 (268)
T cd06630         183 EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS--NHLALIFKIASATTAP---SI----PEHLSPGLRDVTLRCLELQPE  253 (268)
T ss_pred             CCCCcccchHHHHHHHHHHHhCCCCCCCCCCc--chHHHHHHHhccCCCC---CC----chhhCHHHHHHHHHHcCCCcc
Confidence            45678899999999999999999987532211  1111111111111111   11    111223788899999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       254 ~R~~~~~ll~  263 (268)
T cd06630         254 DRPPSRELLK  263 (268)
T ss_pred             cCcCHHHHhc
Confidence            9999998864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=98.79  E-value=1e-08  Score=74.55  Aligned_cols=81  Identities=11%  Similarity=0.135  Sum_probs=51.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ++.++.++|+||+|++++++++|+.||........  ......... ...    ...   +......+.+++..||+.+|
T Consensus       175 ~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~--~~~~~~~~~-~~~----~~~---~~~~~~~~~~li~~~l~~~p  244 (285)
T cd05630         175 NERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK--REEVERLVK-EVQ----EEY---SEKFSPDARSLCKMLLCKDP  244 (285)
T ss_pred             CCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch--HHHHHhhhh-hhh----hhc---CccCCHHHHHHHHHHhhcCH
Confidence            45678899999999999999999999864321100  000111110 000    100   22222378889999999999


Q ss_pred             CCCCC-----HHHHHH
Q 047465           84 DDRPT-----VYDVVS   94 (139)
Q Consensus        84 ~~Rps-----~~~v~~   94 (139)
                      .+||+     +.+++.
T Consensus       245 ~~R~s~~~~~~~~~~~  260 (285)
T cd05630         245 KERLGCQGGGAREVKE  260 (285)
T ss_pred             HHccCCCCCchHHHHc
Confidence            99999     677765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=98.79  E-value=1.5e-08  Score=73.16  Aligned_cols=87  Identities=10%  Similarity=-0.040  Sum_probs=49.1

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhh---cc----------chhhhhhhh----ccCCCCCH
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVAN---SH----------IFLCLWLII----NLRHGIYG   68 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----------~~~~~~~~~----d~~p~~~~   68 (139)
                      .++.++||||+|++++++++|+.|+..... ........ ....   ..          ....+..+.    ........
T Consensus       178 ~~~~~~Dv~slG~il~~l~tg~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (285)
T cd07861         178 RYSTPVDIWSIGTIFAEMATKKPLFHGDSE-IDQLFRIF-RILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLD  255 (285)
T ss_pred             CcCcHHHHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHH-HHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCC
Confidence            467889999999999999999988753211 00000000 0000   00          000000000    00001112


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           69 RTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        69 ~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ..+.+++.+|++.+|.+||++.+++.
T Consensus       256 ~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         256 EDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             HHHHHHHHHHhcCChhhCCCHHHHhc
Confidence            26778999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=98.79  E-value=1.1e-08  Score=75.80  Aligned_cols=86  Identities=9%  Similarity=-0.058  Sum_probs=53.6

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCC-CCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHG-IYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~-~~~~~~~~l~~~C~~~   81 (139)
                      .+..++.++||||+|++++||++|+.|+.....  ......+.........+   ...+  +. .....+.+++.+|+..
T Consensus       171 ~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~--~~~~~~i~~~~~~~~~~---~~~~--~~~~~s~~~~~li~~~l~~  243 (333)
T cd05600         171 RGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTP--NETWENLKYWKETLQRP---VYDD--PRFNLSDEAWDLITKLIND  243 (333)
T ss_pred             cCCCCCCccceecchHHHhhhhhCCCCCCCCCH--HHHHHHHHhccccccCC---CCCc--cccccCHHHHHHHHHHhhC
Confidence            345678999999999999999999999853221  11111111000000001   1111  11 1123788899999999


Q ss_pred             CCCCCCCHHHHHHH
Q 047465           82 SADDRPTVYDVVSM   95 (139)
Q Consensus        82 ~p~~Rps~~~v~~~   95 (139)
                      +|.+||++.+++..
T Consensus       244 ~~~rr~s~~~ll~h  257 (333)
T cd05600         244 PSRRFGSLEDIKNH  257 (333)
T ss_pred             hhhhcCCHHHHHhC
Confidence            99999999999864

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=98.78  E-value=1.5e-08  Score=73.43  Aligned_cols=80  Identities=14%  Similarity=0.106  Sum_probs=51.7

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++|+||+|++++|+++|+.||...............  .  ....   .+    +......+.++...|+..+|.
T Consensus       171 ~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~--~--~~~~---~~----~~~~~~~~~~li~~~l~~~p~  239 (279)
T cd05633         171 TAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT--L--TVNV---EL----PDSFSPELKSLLEGLLQRDVS  239 (279)
T ss_pred             CCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHh--h--cCCc---CC----ccccCHHHHHHHHHHhcCCHH
Confidence            34788999999999999999999998643322111111110  0  0111   11    111223788899999999999


Q ss_pred             CCC-----CHHHHHHH
Q 047465           85 DRP-----TVYDVVSM   95 (139)
Q Consensus        85 ~Rp-----s~~~v~~~   95 (139)
                      +|+     ++.++++.
T Consensus       240 ~R~~~~~~~~~~~~~h  255 (279)
T cd05633         240 KRLGCLGRGAQEVKEH  255 (279)
T ss_pred             HhcCCCCCCHHHHHhC
Confidence            999     58877653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=98.78  E-value=2.1e-08  Score=72.35  Aligned_cols=85  Identities=11%  Similarity=0.035  Sum_probs=48.8

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccc-------------hhhhhhhhc-----cCCCCCH
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHI-------------FLCLWLIIN-----LRHGIYG   68 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~d-----~~p~~~~   68 (139)
                      ++.++||||||++++|+++|+.|+..... ........ .......             ...++.+..     .-+.+ .
T Consensus       178 ~~~~~Dv~slG~il~~l~tg~~p~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  254 (284)
T cd07860         178 YSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIF-RTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPL-D  254 (284)
T ss_pred             CCcHHHHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHH-HHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccC-C
Confidence            47789999999999999999988753221 11111100 0000000             000000000     00111 1


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           69 RTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        69 ~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ..+.+++.+||+.+|.+||++.+++.
T Consensus       255 ~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         255 EDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             HHHHHHHHHhcCCCcccCCCHHHHhc
Confidence            26678999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=98.78  E-value=2.6e-08  Score=71.68  Aligned_cols=84  Identities=11%  Similarity=0.049  Sum_probs=50.6

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhc---cchh-------------------hhhhhhccC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANS---HIFL-------------------CLWLIINLR   63 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------------~~~~~~d~~   63 (139)
                      .++.++|||+||+++||+++|+.|+......  ............   ....                   .+....   
T Consensus       178 ~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  252 (287)
T cd07840         178 RYGPEVDMWSVGCILAELFLGKPIFQGSTEL--EQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFF---  252 (287)
T ss_pred             cCChHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHh---
Confidence            4678999999999999999999887533221  111111110000   0000                   000000   


Q ss_pred             CCCCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           64 HGIYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        64 p~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      .......+.+++.+||+.+|.+||++.+++.
T Consensus       253 ~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         253 KHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             cccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            0111236788999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=98.78  E-value=1.4e-08  Score=75.11  Aligned_cols=72  Identities=13%  Similarity=0.034  Sum_probs=48.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|+++|||++|+.||.....  .....   . +.....    ..    |......+.+++.+|++.+|
T Consensus       175 ~~~~~~~~DiwslGvil~elltG~~pf~~~~~--~~~~~---~-i~~~~~----~~----~~~~~~~~~~li~~~l~~~P  240 (324)
T cd05587         175 YQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE--DELFQ---S-IMEHNV----SY----PKSLSKEAVSICKGLLTKHP  240 (324)
T ss_pred             CCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--HHHHH---H-HHcCCC----CC----CCCCCHHHHHHHHHHhhcCH
Confidence            45578899999999999999999999853221  11111   1 111111    11    22233378889999999999


Q ss_pred             CCCCCH
Q 047465           84 DDRPTV   89 (139)
Q Consensus        84 ~~Rps~   89 (139)
                      .+|++.
T Consensus       241 ~~R~~~  246 (324)
T cd05587         241 AKRLGC  246 (324)
T ss_pred             HHcCCC
Confidence            999976

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=98.78  E-value=2.4e-08  Score=72.01  Aligned_cols=87  Identities=14%  Similarity=0.152  Sum_probs=50.5

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhh-----------ccchhhhhhhhc--cC-------C
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVAN-----------SHIFLCLWLIIN--LR-------H   64 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~d--~~-------p   64 (139)
                      ..++.++|+||||++++|+++|+.|+...... ... ........           ......-....+  ..       +
T Consensus       176 ~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (286)
T cd07847         176 TQYGPPVDVWAIGCVFAELLTGQPLWPGKSDV-DQL-YLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFP  253 (286)
T ss_pred             CCcCchhhhHHHHHHHHHHHhCCCCCCCCChH-HHH-HHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhc
Confidence            34678999999999999999999888643221 111 00100000           000000000000  00       0


Q ss_pred             CCCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           65 GIYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        65 ~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      .. ...+.+++.+||+.+|++||++.+++.
T Consensus       254 ~~-~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         254 NI-SSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             cC-CHHHHHHHHHHhcCCccccCCHHHHhc
Confidence            11 126789999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=98.78  E-value=1.2e-08  Score=75.45  Aligned_cols=73  Identities=14%  Similarity=0.087  Sum_probs=49.2

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .++.++.++|||||||++|||++|+.|+.....  ...   ..... ....    ..    |......+.+++..|++.+
T Consensus       174 ~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~--~~~---~~~i~-~~~~----~~----p~~~s~~~~~li~~~l~~~  239 (323)
T cd05616         174 AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DEL---FQSIM-EHNV----AY----PKSMSKEAVAICKGLMTKH  239 (323)
T ss_pred             cCCCCCCccchhchhHHHHHHHhCCCCCCCCCH--HHH---HHHHH-hCCC----CC----CCcCCHHHHHHHHHHcccC
Confidence            345678999999999999999999999853221  111   11111 1111    11    2223337889999999999


Q ss_pred             CCCCCCH
Q 047465           83 ADDRPTV   89 (139)
Q Consensus        83 p~~Rps~   89 (139)
                      |.+|++.
T Consensus       240 p~~R~~~  246 (323)
T cd05616         240 PGKRLGC  246 (323)
T ss_pred             HHhcCCC
Confidence            9999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=98.77  E-value=2.3e-08  Score=72.21  Aligned_cols=87  Identities=10%  Similarity=0.004  Sum_probs=49.0

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccc------------hhhhhhhh------ccCCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHI------------FLCLWLII------NLRHGIY   67 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~------d~~p~~~   67 (139)
                      .++.++||||+|++++||++|+.|+..... ................            ...++...      ...+. .
T Consensus       176 ~~~~~~DiwslG~il~~l~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  253 (284)
T cd07839         176 LYSTSIDMWSAGCIFAELANAGRPLFPGND-VDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPK-L  253 (284)
T ss_pred             ccCcHHHHHHHHHHHHHHHhcCCCCcCCCC-HHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhccc-C
Confidence            367899999999999999999888532111 1111111100000000            00000000      00011 1


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           68 GRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        68 ~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ...+.+++.+|++.+|.+||++.+++.
T Consensus       254 ~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         254 NSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             CHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence            126788999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=98.77  E-value=1.9e-08  Score=71.81  Aligned_cols=80  Identities=16%  Similarity=0.224  Sum_probs=51.9

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++|+|++|+++|++++|..|+.......   ..............   ..    |......+..++..||+.+|.
T Consensus       167 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~---~~----~~~~~~~~~~~i~~~l~~~p~  236 (262)
T cd05572         167 KGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP---MEIYNDILKGNGKL---EF----PNYIDKAAKDLIKQLLRRNPE  236 (262)
T ss_pred             CCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH---HHHHHHHhccCCCC---CC----CcccCHHHHHHHHHHccCChh
Confidence            456788999999999999999999885432111   11111111111111   11    222234889999999999999


Q ss_pred             CCCC-----HHHHHH
Q 047465           85 DRPT-----VYDVVS   94 (139)
Q Consensus        85 ~Rps-----~~~v~~   94 (139)
                      +||+     +.++++
T Consensus       237 ~R~~~~~~~~~~l~~  251 (262)
T cd05572         237 ERLGNLKGGIKDIKK  251 (262)
T ss_pred             hCcCCcccCHHHHhc
Confidence            9999     666654

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=98.76  E-value=9.6e-09  Score=74.36  Aligned_cols=81  Identities=19%  Similarity=0.263  Sum_probs=57.7

Q ss_pred             CccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCCC
Q 047465            8 SIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRP   87 (139)
Q Consensus         8 s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~Rp   87 (139)
                      -..+|+|||.+++||+.++.-||.+..+     .+......-++...   .+.   |.+ ...+.+++.-|+..||.+||
T Consensus       367 ~raadmwsfaillwel~trevpfadlsp-----mecgmkialeglrv---~ip---pgi-s~hm~klm~icmnedpgkrp  434 (448)
T KOG0195|consen  367 IRAADMWSFAILLWELNTREVPFADLSP-----MECGMKIALEGLRV---HIP---PGI-SRHMNKLMNICMNEDPGKRP  434 (448)
T ss_pred             hhhhhHHHHHHHHHHhhccccccccCCc-----hhhhhhhhhccccc---cCC---CCc-cHHHHHHHHHHhcCCCCcCC
Confidence            3578999999999999999999964332     12222222334333   221   222 23788999999999999999


Q ss_pred             CHHHHHHHHhccc
Q 047465           88 TVYDVVSMLTNEA  100 (139)
Q Consensus        88 s~~~v~~~L~~~~  100 (139)
                      .|..++-.|++..
T Consensus       435 kfdmivpilekm~  447 (448)
T KOG0195|consen  435 KFDMIVPILEKMI  447 (448)
T ss_pred             CcceehhhHHHhc
Confidence            9999999988753

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.76  E-value=2.2e-08  Score=78.36  Aligned_cols=75  Identities=19%  Similarity=0.267  Sum_probs=54.9

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDR   86 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~R   86 (139)
                      .+..+||||+||++|-++.|+.||..     ..+.+.....-......         |........++....++.+|.+|
T Consensus       195 HsfEvDiWSlGcvmYtLL~G~PPFet-----k~vkety~~Ik~~~Y~~---------P~~ls~~A~dLI~~lL~~~P~~R  260 (592)
T KOG0575|consen  195 HSFEVDIWSLGCVMYTLLVGRPPFET-----KTVKETYNKIKLNEYSM---------PSHLSAEAKDLIRKLLRPNPSER  260 (592)
T ss_pred             CCCchhhhhhhhHHHhhhhCCCCccc-----chHHHHHHHHHhcCccc---------ccccCHHHHHHHHHHhcCCcccC
Confidence            56779999999999999999999952     22222222222222322         55555588899999999999999


Q ss_pred             CCHHHHHHH
Q 047465           87 PTVYDVVSM   95 (139)
Q Consensus        87 ps~~~v~~~   95 (139)
                      |++.+|+..
T Consensus       261 psl~~vL~h  269 (592)
T KOG0575|consen  261 PSLDEVLDH  269 (592)
T ss_pred             CCHHHHhcC
Confidence            999999864

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=98.76  E-value=1.1e-08  Score=76.11  Aligned_cols=81  Identities=17%  Similarity=0.086  Sum_probs=52.2

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+||+++||++|+.||.....     ..............   ....  .......+..++..|+. +|
T Consensus       204 ~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~-----~~~~~~i~~~~~~~---~~p~--~~~~~~~~~~li~~ll~-dp  272 (350)
T cd05573         204 GTPYGLECDWWSLGVILYEMLYGFPPFYSDTL-----QETYNKIINWKESL---RFPP--DPPVSPEAIDLICRLLC-DP  272 (350)
T ss_pred             CCCCCCceeeEecchhhhhhccCCCCCCCCCH-----HHHHHHHhccCCcc---cCCC--CCCCCHHHHHHHHHHcc-Ch
Confidence            44678899999999999999999999853221     11111111100111   1110  11123478889999997 99


Q ss_pred             CCCCC-HHHHHHH
Q 047465           84 DDRPT-VYDVVSM   95 (139)
Q Consensus        84 ~~Rps-~~~v~~~   95 (139)
                      .+|++ +.+++..
T Consensus       273 ~~R~~s~~~ll~h  285 (350)
T cd05573         273 EDRLGSFEEIKSH  285 (350)
T ss_pred             hhcCCCHHHHhcC
Confidence            99999 9999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=98.76  E-value=1.9e-08  Score=72.57  Aligned_cols=87  Identities=8%  Similarity=-0.023  Sum_probs=49.8

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhc------------cchhhhhhhhc-----cCCCCCH
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANS------------HIFLCLWLIIN-----LRHGIYG   68 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~d-----~~p~~~~   68 (139)
                      .++.++|+||||+++|++++|+.|+..... ..............            +....+.....     ..+. ..
T Consensus       176 ~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  253 (283)
T cd07835         176 QYSTPVDIWSIGCIFAEMVNRRPLFPGDSE-IDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPN-LD  253 (283)
T ss_pred             ccCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCC-CC
Confidence            457899999999999999999988753221 11111111000000            00000000000     0011 11


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           69 RTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        69 ~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ..+.+++.+|++.+|.+||++.+++.
T Consensus       254 ~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         254 EDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            26788999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=98.75  E-value=1.6e-08  Score=74.90  Aligned_cols=79  Identities=14%  Similarity=0.081  Sum_probs=50.2

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      .++.++||||||++++||++|+.|+........ . ..+...+.... .   .+    +......+.+++.+|++.+|++
T Consensus       183 ~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~-~~~~~~~~~~~-~---~~----~~~~~~~~~~li~~~l~~dp~~  252 (332)
T cd05614         183 GHGKAVDWWSLGILIFELLTGASPFTLEGERNT-Q-SEVSRRILKCD-P---PF----PSFIGPEAQDLLHKLLRKDPKK  252 (332)
T ss_pred             CCCCccccccchhhhhhhhcCCCCCCCCCCCCC-H-HHHHHHHhcCC-C---CC----CCCCCHHHHHHHHHHcCCCHHH
Confidence            367789999999999999999999853222111 1 11111111111 1   11    2222337889999999999999


Q ss_pred             CC-----CHHHHHH
Q 047465           86 RP-----TVYDVVS   94 (139)
Q Consensus        86 Rp-----s~~~v~~   94 (139)
                      ||     ++.+++.
T Consensus       253 R~~~~~~~~~~~l~  266 (332)
T cd05614         253 RLGAGPQGASEIKE  266 (332)
T ss_pred             cCCCCCCCHHHHHc
Confidence            99     6667764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=98.75  E-value=5.8e-09  Score=77.23  Aligned_cols=80  Identities=16%  Similarity=0.170  Sum_probs=51.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      .+.++.++||||||++++||++|+.||.....     ..............   ...+  .......+.+++..|++ +|
T Consensus       183 ~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-----~~~~~~i~~~~~~~---~~~~--~~~~~~~~~~li~~ll~-~p  251 (330)
T cd05601         183 KGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS-----AKTYNNIMNFQRFL---KFPE--DPKVSSDFLDLIQSLLC-GQ  251 (330)
T ss_pred             cCCCCCcceeecccceeeeeccCCCCCCCCCH-----HHHHHHHHcCCCcc---CCCC--CCCCCHHHHHHHHHHcc-Ch
Confidence            34577899999999999999999999853211     11111111111111   1111  11122377888889997 99


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       252 ~~R~t~~~l~~  262 (330)
T cd05601         252 KERLGYEGLCC  262 (330)
T ss_pred             hhCCCHHHHhC
Confidence            99999999875

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>PLN00181 protein SPA1-RELATED; Provisional

Probab=98.75  E-value=1.9e-08  Score=82.84  Aligned_cols=77  Identities=16%  Similarity=0.180  Sum_probs=49.1

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .+..++.++|||||||+++||+++..++...    .......    .....+   ....  +.  ......++..||+.+
T Consensus       188 ~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~----~~~~~~~----~~~~~~---~~~~--~~--~~~~~~~~~~~L~~~  252 (793)
T PLN00181        188 NGSSSNCASDVYRLGVLLFELFCPVSSREEK----SRTMSSL----RHRVLP---PQIL--LN--WPKEASFCLWLLHPE  252 (793)
T ss_pred             ccCCCCchhhhhhHHHHHHHHhhCCCchhhH----HHHHHHH----HHhhcC---hhhh--hc--CHHHHHHHHHhCCCC
Confidence            4567899999999999999999987665311    1111101    001111   1000  11  114567888999999


Q ss_pred             CCCCCCHHHHHH
Q 047465           83 ADDRPTVYDVVS   94 (139)
Q Consensus        83 p~~Rps~~~v~~   94 (139)
                      |.+||++.+++.
T Consensus       253 P~~Rps~~eil~  264 (793)
T PLN00181        253 PSCRPSMSELLQ  264 (793)
T ss_pred             hhhCcChHHHhh
Confidence            999999999975

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=98.75  E-value=3.5e-08  Score=73.96  Aligned_cols=90  Identities=13%  Similarity=0.007  Sum_probs=52.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHH------------------HHHHhhcc-chh--hhh----h
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIY------------------YLRVANSH-IFL--CLW----L   58 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~-~~~--~~~----~   58 (139)
                      +..++.++||||+|+++|+|++|+.||...... ..+...                  +....... ...  .+.    .
T Consensus       196 ~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (359)
T cd07876         196 GMGYKENVDIWSVGCIMGELVKGSVIFQGTDHI-DQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPD  274 (359)
T ss_pred             CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccc
Confidence            456788999999999999999999998533210 000000                  00000000 000  000    0


Q ss_pred             hhc----cCCCCCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           59 IIN----LRHGIYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        59 ~~d----~~p~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      +..    .+.......+.+++.+|++.+|++||++.+++.
T Consensus       275 ~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  314 (359)
T cd07876         275 WIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR  314 (359)
T ss_pred             cccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence            000    001112236788999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=98.74  E-value=3.3e-08  Score=73.20  Aligned_cols=25  Identities=24%  Similarity=0.482  Sum_probs=23.2

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           70 TTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        70 ~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      .+.+++.+||+.+|.+||++.++++
T Consensus       283 ~~~~li~~~l~~dP~~Rpta~e~l~  307 (328)
T cd08226         283 AFQNLVELCLQQDPEKRPSASSLLS  307 (328)
T ss_pred             HHHHHHHHHccCCcccCCCHHHHhh
Confidence            6789999999999999999999974

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=98.74  E-value=8.7e-09  Score=83.00  Aligned_cols=82  Identities=21%  Similarity=0.191  Sum_probs=58.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +...++|+||||+||++|.++.+..||+..-.  .        .+-.+..    .+.+  .......+..|...|++.+|
T Consensus       232 g~pI~eKsDIWALGclLYkLCy~t~PFe~sg~--l--------aIlng~Y----~~P~--~p~ys~~l~~LI~~mL~~nP  295 (738)
T KOG1989|consen  232 GLPIGEKSDIWALGCLLYKLCYFTTPFEESGK--L--------AILNGNY----SFPP--FPNYSDRLKDLIRTMLQPNP  295 (738)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc--e--------eEEeccc----cCCC--CccHHHHHHHHHHHHhccCc
Confidence            34578999999999999999999999964211  0        0111111    1111  11223378889999999999


Q ss_pred             CCCCCHHHHHHHHhcccC
Q 047465           84 DDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~  101 (139)
                      .+||.+.+|+..+..+..
T Consensus       296 ~~RPnI~Qv~~~~~~l~~  313 (738)
T KOG1989|consen  296 DERPNIYQVLEEIFELAN  313 (738)
T ss_pred             ccCCCHHHHHHHHHHHhc
Confidence            999999999988776544

>PTZ00036 glycogen synthase kinase; Provisional

Probab=98.74  E-value=2.9e-08  Score=76.71  Aligned_cols=84  Identities=13%  Similarity=0.061  Sum_probs=51.6

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhcc---------------chh-----hhhhhhccCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSH---------------IFL-----CLWLIINLRHG   65 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~-----~~~~~~d~~p~   65 (139)
                      .++.++||||+||++|||++|..||..... ...+.... ......               ...     .+...+   |.
T Consensus       247 ~~~~~~DiwSlGvil~elltG~~pf~~~~~-~~~~~~i~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---p~  321 (440)
T PTZ00036        247 NYTTHIDLWSLGCIIAEMILGYPIFSGQSS-VDQLVRII-QVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVF---PK  321 (440)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHH-HHhCCCCHHHHHHhchhhhcccCCccCchhHHHHh---cc
Confidence            578999999999999999999988853221 11111111 100000               000     000000   11


Q ss_pred             CCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           66 IYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        66 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      .....+.+++.+||+.+|.+||++.+++.
T Consensus       322 ~~~~~~~~li~~~L~~dP~~R~ta~e~l~  350 (440)
T PTZ00036        322 GTPDDAINFISQFLKYEPLKRLNPIEALA  350 (440)
T ss_pred             CCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence            12237889999999999999999999884

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=98.74  E-value=4.5e-08  Score=70.56  Aligned_cols=83  Identities=16%  Similarity=0.101  Sum_probs=49.6

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhc-------------cch---------hhhhhhhccC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANS-------------HIF---------LCLWLIINLR   63 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~---------~~~~~~~d~~   63 (139)
                      .++.++|+||||++++|+++|+.++....... . ..........             ...         ..+....   
T Consensus       175 ~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  249 (283)
T cd07830         175 SYSSPVDIWALGCIMAELYTLRPLFPGSSEID-Q-LYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLI---  249 (283)
T ss_pred             CcCCccchhhHHHHHHHHHhCCCccCCCChHH-H-HHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHc---
Confidence            46789999999999999999998875322110 0 0000000000             000         0000000   


Q ss_pred             CCCCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           64 HGIYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        64 p~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      +.. ...+..++.+||+.+|.+||++.+++.
T Consensus       250 ~~~-~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         250 PNA-SPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             ccC-CHHHHHHHHHhcccCcccCCCHHHHhh
Confidence            111 237889999999999999999998864

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=98.74  E-value=3.8e-08  Score=69.53  Aligned_cols=76  Identities=21%  Similarity=0.243  Sum_probs=50.7

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      ..+.++|+|++|++++++++|+.|+..... .    ....... .....   .+    +......+..++.+|+..+|++
T Consensus       175 ~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~-~----~~~~~~~-~~~~~---~~----~~~~~~~~~~~i~~~l~~~p~~  241 (254)
T cd06627         175 GASTASDIWSLGCTVIELLTGNPPYYDLNP-M----AALFRIV-QDDHP---PL----PEGISPELKDFLMQCFQKDPNL  241 (254)
T ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCccH-H----HHHHHHh-ccCCC---CC----CCCCCHHHHHHHHHHHhCChhh
Confidence            467889999999999999999988753221 1    1111111 11111   11    1112237889999999999999


Q ss_pred             CCCHHHHHH
Q 047465           86 RPTVYDVVS   94 (139)
Q Consensus        86 Rps~~~v~~   94 (139)
                      ||++.+++.
T Consensus       242 R~~~~~~l~  250 (254)
T cd06627         242 RPTAKQLLK  250 (254)
T ss_pred             CcCHHHHhc
Confidence            999998864

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=98.74  E-value=2.9e-08  Score=74.25  Aligned_cols=29  Identities=24%  Similarity=0.195  Sum_probs=25.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEF   32 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~   32 (139)
                      +..++.++||||+|+++++|++|+.||..
T Consensus       192 ~~~~~~~~DiwslG~il~el~~g~~pf~~  220 (355)
T cd07874         192 GMGYKENVDIWSVGCIMGEMVRHKILFPG  220 (355)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            44578899999999999999999999853

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>PHA03207 serine/threonine kinase US3; Provisional

Probab=98.74  E-value=4.1e-08  Score=74.65  Aligned_cols=90  Identities=14%  Similarity=0.062  Sum_probs=51.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcC-chHHHHHHHHHhh----------------------ccchh--hhhh
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTD-SLIFVIYYLRVAN----------------------SHIFL--CLWL   58 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~-~~~~~~~~~~~~~----------------------~~~~~--~~~~   58 (139)
                      +..++.++||||+||++|||++|+.|+...... .......+.....                      .....  .++.
T Consensus       261 ~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (392)
T PHA03207        261 LDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPP  340 (392)
T ss_pred             CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccc
Confidence            456788999999999999999999988432211 1111111111000                      00000  0000


Q ss_pred             hhccCCCCCHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047465           59 IINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSM   95 (139)
Q Consensus        59 ~~d~~p~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~~   95 (139)
                      .+.  .......+..++..|+..+|.+||++.+++..
T Consensus       341 ~~~--~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        341 VIR--KYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL  375 (392)
T ss_pred             hhh--ccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence            000  01112266778899999999999999998754

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=98.74  E-value=3.3e-08  Score=70.77  Aligned_cols=78  Identities=15%  Similarity=0.170  Sum_probs=48.5

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++|+||||+++||+++|+.|+..... .    .............   .+    |......+..+..+|+. +|
T Consensus       183 ~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-~----~~~~~~~~~~~~~---~~----~~~~~~~~~~~i~~~l~-~p  249 (265)
T cd06652         183 GEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA-M----AAIFKIATQPTNP---VL----PPHVSDHCRDFLKRIFV-EA  249 (265)
T ss_pred             CCCCCcchhHHHHHHHHHHHhhCCCCCCccch-H----HHHHHHhcCCCCC---CC----chhhCHHHHHHHHHHhc-Ch
Confidence            34567899999999999999999999853211 1    1111111111111   11    11111256778888884 89


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||+++++++
T Consensus       250 ~~Rp~~~~il~  260 (265)
T cd06652         250 KLRPSADELLR  260 (265)
T ss_pred             hhCCCHHHHhc
Confidence            99999998864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=98.74  E-value=2.5e-08  Score=74.87  Aligned_cols=29  Identities=24%  Similarity=0.257  Sum_probs=25.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEF   32 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~   32 (139)
                      +..++.++||||+|++++||++|+.||..
T Consensus       199 ~~~~~~~~DiwSlG~il~ell~g~~pf~~  227 (364)
T cd07875         199 GMGYKENVDIWSVGCIMGEMIKGGVLFPG  227 (364)
T ss_pred             CCCCCchhhHHhHHHHHHHHHhCCCCCCC
Confidence            45678899999999999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=98.73  E-value=3.8e-08  Score=73.10  Aligned_cols=89  Identities=16%  Similarity=0.031  Sum_probs=53.4

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhcc-----------------------chhhhhhhhc
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSH-----------------------IFLCLWLIIN   61 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~d   61 (139)
                      ..++.++||||+|++++++++|+.|+.....  ..............                       ....+.... 
T Consensus       185 ~~~~~~~DvwslGvil~el~~G~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  261 (336)
T cd07849         185 KGYTKAIDIWSVGCILAEMLSNRPLFPGKDY--LHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLF-  261 (336)
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHh-
Confidence            3578899999999999999999988853221  11111111100000                       000000000 


Q ss_pred             cCCCCCHHHHHHHHHHhcccCCCCCCCHHHHHHH--Hhcc
Q 047465           62 LRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSM--LTNE   99 (139)
Q Consensus        62 ~~p~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~~--L~~~   99 (139)
                        +.. ...+.+++.+||+.+|.+||++.+++..  ++..
T Consensus       262 --~~~-~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~  298 (336)
T cd07849         262 --PNA-DPKALDLLDKMLTFNPHKRITVEEALAHPYLEQY  298 (336)
T ss_pred             --ccc-CcHHHHHHHHHcCCChhhCcCHHHHhcCcccccc
Confidence              111 1267899999999999999999999875  4443

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.73  E-value=5.7e-08  Score=72.44  Aligned_cols=94  Identities=18%  Similarity=0.083  Sum_probs=54.2

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHh-----------hccchh----hhhhhhc-----cCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVA-----------NSHIFL----CLWLIIN-----LRH   64 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~----~~~~~~d-----~~p   64 (139)
                      ..++.++||||||++++|+++|+.||.....  ...........           ......    .++....     ..+
T Consensus       190 ~~~~~~~Dv~slGvil~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (342)
T cd07879         190 MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY--LDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFP  267 (342)
T ss_pred             cccCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhc
Confidence            3578899999999999999999999853211  11111000000           000000    0000000     001


Q ss_pred             CCCHHHHHHHHHHhcccCCCCCCCHHHHHH--HHhcccC
Q 047465           65 GIYGRTTGHWTLLCAQESADDRPTVYDVVS--MLTNEAT  101 (139)
Q Consensus        65 ~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~--~L~~~~~  101 (139)
                      . ....+.+++.+||+.+|.+||++.+++.  .++....
T Consensus       268 ~-~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~  305 (342)
T cd07879         268 K-ASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD  305 (342)
T ss_pred             C-CCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence            1 1226779999999999999999999985  3555544

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=98.73  E-value=2.6e-08  Score=72.52  Aligned_cols=87  Identities=13%  Similarity=0.028  Sum_probs=50.7

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhh--------c----------cCCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII--------N----------LRHGIY   67 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------d----------~~p~~~   67 (139)
                      .++.++||||+|++++|+++|+.|+.....  ......+...........++.+.        +          ......
T Consensus       194 ~~~~~~Di~slG~~~~el~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (302)
T cd07864         194 RYGPAIDVWSCGCILGELFTKKPIFQANQE--LAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFI  271 (302)
T ss_pred             CCCchhHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCC
Confidence            457889999999999999999988753221  11111111111000000000000        0          000111


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           68 GRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        68 ~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ...+.+++..||+.+|.+||++.+++.
T Consensus       272 ~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         272 PTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            237889999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=98.73  E-value=6.2e-09  Score=76.78  Aligned_cols=74  Identities=14%  Similarity=0.048  Sum_probs=48.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||||++++||++|+.|+.....  .   ........ ...    .+    |......+..++..||+.+|
T Consensus       172 ~~~~~~~~DiwslG~il~el~tg~~p~~~~~~--~---~~~~~i~~-~~~----~~----p~~~~~~~~~li~~~l~~~P  237 (318)
T cd05582         172 RRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR--K---ETMTMILK-AKL----GM----PQFLSPEAQSLLRALFKRNP  237 (318)
T ss_pred             CCCCCCccceeccceEeeeeccCCCCCCCCCH--H---HHHHHHHc-CCC----CC----CCCCCHHHHHHHHHHhhcCH
Confidence            34567899999999999999999999853211  1   11111111 111    11    22223378889999999999


Q ss_pred             CCCCCHHH
Q 047465           84 DDRPTVYD   91 (139)
Q Consensus        84 ~~Rps~~~   91 (139)
                      .+||++.+
T Consensus       238 ~~R~~a~~  245 (318)
T cd05582         238 ANRLGAGP  245 (318)
T ss_pred             hHcCCCCC
Confidence            99999544

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=98.73  E-value=3.4e-08  Score=71.28  Aligned_cols=78  Identities=13%  Similarity=0.130  Sum_probs=48.3

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ++.++.++|+||+|++++++++|+.|+...... ...........  ....   ..    +......+.+++.+||+.+|
T Consensus       168 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~--~~~~---~~----~~~~~~~~~~li~~~l~~~p  237 (277)
T cd05577         168 GEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEK-VEKEELKRRTL--EMAV---EY----PDKFSPEAKDLCEALLQKDP  237 (277)
T ss_pred             CCCCCchhhhHHHHHHHHHHhhCCCCCCCCccc-ccHHHHHhccc--cccc---cC----CccCCHHHHHHHHHHccCCh
Confidence            445778999999999999999999998543221 00001110001  0111   11    22223378899999999999


Q ss_pred             CCCCCHHH
Q 047465           84 DDRPTVYD   91 (139)
Q Consensus        84 ~~Rps~~~   91 (139)
                      .+||++.+
T Consensus       238 ~~R~~~~~  245 (277)
T cd05577         238 EKRLGCRG  245 (277)
T ss_pred             hHccCCCc
Confidence            99994443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=98.73  E-value=2e-08  Score=74.57  Aligned_cols=78  Identities=15%  Similarity=0.187  Sum_probs=49.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcC---chHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTD---SLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQ   80 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~   80 (139)
                      +..++.++||||||++++|+++|+.||......   ......+..........    .+    |......+..++.+|++
T Consensus       170 ~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~----~~----p~~~~~~~~~ll~~~L~  241 (329)
T cd05618         170 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI----RI----PRSLSVKAASVLKSFLN  241 (329)
T ss_pred             CCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC----CC----CCCCCHHHHHHHHHHhc
Confidence            456788999999999999999999998532111   11111222222211111    11    33233377889999999


Q ss_pred             cCCCCCCCH
Q 047465           81 ESADDRPTV   89 (139)
Q Consensus        81 ~~p~~Rps~   89 (139)
                      .+|++|++.
T Consensus       242 ~dP~~R~~~  250 (329)
T cd05618         242 KDPKERLGC  250 (329)
T ss_pred             CCHHHcCCC
Confidence            999999983

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=98.73  E-value=1.1e-08  Score=75.62  Aligned_cols=73  Identities=16%  Similarity=0.120  Sum_probs=48.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|++++||++|+.||....     .......... +..    .+ .  +.. ...+.+++..|++.+|
T Consensus       170 ~~~~~~~~DvwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~-~~~----~~-~--~~~-~~~~~~li~~~l~~~p  235 (323)
T cd05575         170 KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-----TAEMYDNILN-KPL----RL-K--PNI-SVSARHLLEGLLQKDR  235 (323)
T ss_pred             CCCCCccccccccchhhhhhhcCCCCCCCCC-----HHHHHHHHHc-CCC----CC-C--CCC-CHHHHHHHHHHhhcCH
Confidence            4567889999999999999999999985321     1111111111 111    11 0  222 3378899999999999


Q ss_pred             CCCCCHH
Q 047465           84 DDRPTVY   90 (139)
Q Consensus        84 ~~Rps~~   90 (139)
                      .+||++.
T Consensus       236 ~~R~~~~  242 (323)
T cd05575         236 TKRLGAK  242 (323)
T ss_pred             HhCCCCC
Confidence            9999874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=98.72  E-value=9.1e-08  Score=69.58  Aligned_cols=87  Identities=8%  Similarity=-0.036  Sum_probs=49.6

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhcc---chhhhhhhhc-----cCC--------CCCHH
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSH---IFLCLWLIIN-----LRH--------GIYGR   69 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d-----~~p--------~~~~~   69 (139)
                      .++.++|+||||++++|+++|..++.....  ..............   ....+....+     ..+        .....
T Consensus       179 ~~~~~~Dv~slG~il~e~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (298)
T cd07841         179 HYGVGVDMWSVGCIFAELLLRVPFLPGDSD--IDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASD  256 (298)
T ss_pred             CCCcHHHHHHHHHHHHHHHcCCccccCCcc--HHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccH
Confidence            467899999999999999999766543221  11111111100000   0000000000     000        01122


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           70 TTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        70 ~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      .+.+++..||+.+|++||++.+++.
T Consensus       257 ~~~~li~~~l~~~P~~R~s~~e~l~  281 (298)
T cd07841         257 DALDLLQRLLTLNPNKRITARQALE  281 (298)
T ss_pred             HHHHHHHHHhcCCcccCcCHHHHhh
Confidence            6788999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=98.72  E-value=4.1e-08  Score=72.92  Aligned_cols=85  Identities=15%  Similarity=-0.005  Sum_probs=51.3

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHH-----------------------hhccchhhhhhhhc
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRV-----------------------ANSHIFLCLWLIIN   61 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~d   61 (139)
                      ..++.++|+||||+++|++++|+.|+......  .........                       ........+..+. 
T Consensus       188 ~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  264 (337)
T cd07852         188 TRYTKGVDMWSVGCILGEMLLGKPLFPGTSTL--NQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELL-  264 (337)
T ss_pred             ccccccchHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhc-
Confidence            34678899999999999999999887532211  000000000                       0000000000000 


Q ss_pred             cCCCCCHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047465           62 LRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSM   95 (139)
Q Consensus        62 ~~p~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~~   95 (139)
                        +. ....+.+++..||+.+|.+||++.+++..
T Consensus       265 --~~-~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         265 --PK-ASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             --cC-CCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence              11 12378889999999999999999999863

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.72  E-value=2.9e-08  Score=76.06  Aligned_cols=88  Identities=14%  Similarity=0.041  Sum_probs=58.3

Q ss_pred             CCCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhh----------------------hh
Q 047465            2 ALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLW----------------------LI   59 (139)
Q Consensus         2 ~~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~   59 (139)
                      ++.+.|+.+.|+||+||++.|+.+.+..|+...+  .+-+..++..+.......|+                      .+
T Consensus       182 Lrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE--~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L  259 (538)
T KOG0661|consen  182 LRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASE--IDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDL  259 (538)
T ss_pred             hhccccCCchHHHHHHHHHHHHHHhcccCCCCcH--HHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHh
Confidence            4678899999999999999999999988875433  12222222322211111000                      11


Q ss_pred             hccCCCCCHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047465           60 INLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSM   95 (139)
Q Consensus        60 ~d~~p~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~~   95 (139)
                      +   |. ...++..++.+|++.||++||++.+.++.
T Consensus       260 ~---p~-~s~~~~~li~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  260 L---PN-ASSEAASLIERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             C---cc-cCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence            1   11 12278899999999999999999998864

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.72  E-value=3e-08  Score=75.70  Aligned_cols=79  Identities=16%  Similarity=0.270  Sum_probs=57.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +-.|..|+|+||+||+++||++-+.+|....     ....+.... .+...   ++    |.....++..++..|++.+|
T Consensus       180 d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~-----m~~Li~ki~-~~~~~---Pl----p~~ys~el~~lv~~~l~~~P  246 (426)
T KOG0589|consen  180 DIPYNEKSDIWSLGCCLYEMCTLKPAFKASN-----MSELILKIN-RGLYS---PL----PSMYSSELRSLVKSMLRKNP  246 (426)
T ss_pred             CCCCCccCcchhhcchHHHHHhcccccCccc-----hHHHHHHHh-hccCC---CC----CccccHHHHHHHHHHhhcCC
Confidence            4568999999999999999999999986432     222222222 22222   22    44445588899999999999


Q ss_pred             CCCCCHHHHHHH
Q 047465           84 DDRPTVYDVVSM   95 (139)
Q Consensus        84 ~~Rps~~~v~~~   95 (139)
                      ..||++.+++..
T Consensus       247 ~~RPsa~~LL~~  258 (426)
T KOG0589|consen  247 EHRPSALELLRR  258 (426)
T ss_pred             ccCCCHHHHhhC
Confidence            999999999875

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=98.72  E-value=2.7e-08  Score=72.32  Aligned_cols=87  Identities=10%  Similarity=0.006  Sum_probs=51.1

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhh---------h----------ccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLI---------I----------NLRHG   65 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~----------d~~p~   65 (139)
                      ..++.++||||+|++++|+++|+.||......  .................++.+         .          +..+.
T Consensus       179 ~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (288)
T cd07871         179 TEYSTPIDMWGVGCILYEMATGRPMFPGSTVK--EELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPR  256 (288)
T ss_pred             cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCC
Confidence            45788999999999999999999988532211  111111111100000000000         0          00011


Q ss_pred             CCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           66 IYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        66 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                       ......++...|++.+|.+||++.+++.
T Consensus       257 -~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         257 -LDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             -CCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence             1226788999999999999999999864

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=98.72  E-value=2.3e-08  Score=72.89  Aligned_cols=84  Identities=6%  Similarity=-0.076  Sum_probs=49.5

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhh---cc-------------------chhhhhhhhccCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVAN---SH-------------------IFLCLWLIINLRH   64 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~~~~~~~d~~p   64 (139)
                      ++.++|+||||++++|+++|+.++.....  ............   ..                   ....+...+.  +
T Consensus       201 ~~~~~Di~slG~~l~el~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~  276 (310)
T cd07865         201 YGPPIDMWGAGCIMAEMWTRSPIMQGNTE--QHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLK--P  276 (310)
T ss_pred             cCchhhhHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcc--c
Confidence            57889999999999999999988753221  111111111000   00                   0000000000  1


Q ss_pred             CCCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           65 GIYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        65 ~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ......+.+++..||..+|.+||++.+++.
T Consensus       277 ~~~~~~~~dli~~~l~~~P~~R~t~~e~l~  306 (310)
T cd07865         277 YVKDPHALDLIDKLLVLDPAKRIDADTALN  306 (310)
T ss_pred             ccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence            122236678999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=98.72  E-value=5.4e-08  Score=73.33  Aligned_cols=86  Identities=14%  Similarity=0.060  Sum_probs=51.1

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhh--------------------ccc-hhhhhhhhccCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVAN--------------------SHI-FLCLWLIINLRH   64 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~-~~~~~~~~d~~p   64 (139)
                      .++.++||||+|++++||++|+.||......  .....+.....                    ... ...+...... .
T Consensus       181 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  257 (372)
T cd07853         181 HYTSAVDIWSVGCIFAELLGRRILFQAQSPI--QQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTL-S  257 (372)
T ss_pred             CCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH--HHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhccc-C
Confidence            4678999999999999999999998543221  11111100000                    000 0000000000 0


Q ss_pred             CCCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           65 GIYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        65 ~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ......+.+++.+|++.||.+||++.+++.
T Consensus       258 ~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  287 (372)
T cd07853         258 SQATHEAVHLLCRMLVFDPDKRISAADALA  287 (372)
T ss_pred             CCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence            111237788999999999999999999986

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=98.71  E-value=6.2e-08  Score=70.28  Aligned_cols=87  Identities=13%  Similarity=0.028  Sum_probs=49.9

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhh-------------ccchhhhh--------hhhccCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVAN-------------SHIFLCLW--------LIINLRH   64 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~--------~~~d~~p   64 (139)
                      .++.++||||+|+++||+++|+.|+....... .....++....             ......+.        ..+. +.
T Consensus       180 ~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  257 (291)
T cd07870         180 DYSSALDIWGAGCIFIEMLQGQPAFPGVSDVF-EQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVW-KR  257 (291)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCchhHH-HHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhc-cc
Confidence            36778999999999999999999885432211 11111110000             00000000        0000 00


Q ss_pred             CCCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           65 GIYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        65 ~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ......+.+++..|++.+|.+||++.+++.
T Consensus       258 ~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         258 LSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             cCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence            011226788999999999999999998864

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=98.71  E-value=2.6e-08  Score=72.75  Aligned_cols=86  Identities=10%  Similarity=0.049  Sum_probs=50.5

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhc-------------------cCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIIN-------------------LRHGI   66 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-------------------~~p~~   66 (139)
                      .++.++||||+|++++||++|+.||.....  ..................+..+.+                   .++. 
T Consensus       181 ~~~~~~Dv~slG~~l~el~tg~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  257 (301)
T cd07873         181 DYSTQIDMWGVGCIFYEMSTGRPLFPGSTV--EEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPR-  257 (301)
T ss_pred             CCccHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCC-
Confidence            467789999999999999999988853321  111111111100000000000000                   0011 


Q ss_pred             CHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           67 YGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        67 ~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ....+.+++.+|++.+|.+||++.+++.
T Consensus       258 ~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         258 LDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             CCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            1226788999999999999999999976

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=98.71  E-value=3.4e-08  Score=72.42  Aligned_cols=27  Identities=19%  Similarity=0.416  Sum_probs=24.1

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTE   31 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~   31 (139)
                      ..++.++||||+|++++||++|+.||.
T Consensus       191 ~~~~~~~DiwSlG~il~el~tg~~~f~  217 (317)
T cd07867         191 RHYTKAIDIWAIGCIFAELLTSEPIFH  217 (317)
T ss_pred             CccCcHHHHHhHHHHHHHHHhCCCCcc
Confidence            347889999999999999999998875

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=98.71  E-value=2.8e-08  Score=73.74  Aligned_cols=83  Identities=17%  Similarity=0.184  Sum_probs=52.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcC---chHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTD---SLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQ   80 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~   80 (139)
                      +..++.++|+||+|+++||+++|+.||+.....   ......+....+.....    .+    |......+..++.+|++
T Consensus       170 ~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~----~~----p~~~~~~~~~li~~~L~  241 (329)
T cd05588         170 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI----RI----PRSLSVKASSVLKGFLN  241 (329)
T ss_pred             CCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC----CC----CCCCCHHHHHHHHHHhc
Confidence            456788999999999999999999998532111   11111222222211111    11    22233378889999999


Q ss_pred             cCCCCCCC------HHHHHH
Q 047465           81 ESADDRPT------VYDVVS   94 (139)
Q Consensus        81 ~~p~~Rps------~~~v~~   94 (139)
                      .+|.+|++      +.+++.
T Consensus       242 ~dP~~R~~~~~~~~~~~i~~  261 (329)
T cd05588         242 KDPKERLGCHPQTGFRDIKS  261 (329)
T ss_pred             cCHHHcCCCCCCCCHHHHhc
Confidence            99999987      566653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=98.71  E-value=2.7e-08  Score=73.76  Aligned_cols=79  Identities=16%  Similarity=0.235  Sum_probs=50.7

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcC-chHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTD-SLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      .+..++.++||||+|++++||++|+.||...... ................ .   .+    |......+..++..|++.
T Consensus       169 ~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~---~~----p~~~~~~~~~li~~~L~~  240 (327)
T cd05617         169 RGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKP-I---RI----PRFLSVKASHVLKGFLNK  240 (327)
T ss_pred             CCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCC-C---CC----CCCCCHHHHHHHHHHhcc
Confidence            3456788999999999999999999998532211 1111122222221111 1   11    333334778899999999


Q ss_pred             CCCCCCCH
Q 047465           82 SADDRPTV   89 (139)
Q Consensus        82 ~p~~Rps~   89 (139)
                      +|.+|+++
T Consensus       241 dP~~R~~~  248 (327)
T cd05617         241 DPKERLGC  248 (327)
T ss_pred             CHHHcCCC
Confidence            99999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=98.71  E-value=6.9e-08  Score=71.80  Aligned_cols=92  Identities=13%  Similarity=-0.007  Sum_probs=53.3

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhh-----------ccchh----hhhhhhc-----cCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVAN-----------SHIFL----CLWLIIN-----LRH   64 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~----~~~~~~d-----~~p   64 (139)
                      ..++.++|+||||++++++++|+.|+.....  ............           .....    .++...+     ..+
T Consensus       184 ~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (337)
T cd07858         184 SEYTTAIDVWSVGCIFAELLGRKPLFPGKDY--VHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFP  261 (337)
T ss_pred             CCCCCcccHHHHHHHHHHHHcCCCCCCCCCh--HHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcc
Confidence            3578899999999999999999988853211  000000000000           00000    0000000     001


Q ss_pred             CCCHHHHHHHHHHhcccCCCCCCCHHHHHHH--Hhcc
Q 047465           65 GIYGRTTGHWTLLCAQESADDRPTVYDVVSM--LTNE   99 (139)
Q Consensus        65 ~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~~--L~~~   99 (139)
                      . ....+.+++.+|++.+|.+||++.+++..  ++..
T Consensus       262 ~-~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~  297 (337)
T cd07858         262 H-ANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL  297 (337)
T ss_pred             c-CCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence            1 12267899999999999999999999865  5543

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=98.71  E-value=4.2e-08  Score=70.39  Aligned_cols=76  Identities=13%  Similarity=0.096  Sum_probs=50.4

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +..+.++|+|++|++++++++|+.|+..... . .    ..........    .+    +......+..++..||+.+|.
T Consensus       197 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-~-~----~~~~~~~~~~----~~----~~~~~~~~~~li~~~l~~~p~  262 (280)
T cd05581         197 KPAGKSSDLWALGCIIYQMLTGKPPFRGSNE-Y-L----TFQKILKLEY----SF----PPNFPPDAKDLIEKLLVLDPQ  262 (280)
T ss_pred             CCCChhhhHHHHHHHHHHHHhCCCCCCCccH-H-H----HHHHHHhcCC----CC----CCccCHHHHHHHHHHhcCCHh
Confidence            3467889999999999999999998853221 0 1    1111111111    11    222233788999999999999


Q ss_pred             CCCCH----HHHHH
Q 047465           85 DRPTV----YDVVS   94 (139)
Q Consensus        85 ~Rps~----~~v~~   94 (139)
                      +||++    .+++.
T Consensus       263 ~R~~~~~~~~~ll~  276 (280)
T cd05581         263 DRLGVNEGYDELKA  276 (280)
T ss_pred             hCCCcccCHHHHhc
Confidence            99999    66653

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=98.70  E-value=3.2e-08  Score=72.17  Aligned_cols=87  Identities=10%  Similarity=0.037  Sum_probs=49.6

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhcc---chhh---hhhh----hc--cCCC------CC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSH---IFLC---LWLI----IN--LRHG------IY   67 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~----~d--~~p~------~~   67 (139)
                      .++.++||||||++++|+++|+.++.....  ..............   ....   ++..    ..  ..+.      ..
T Consensus       203 ~~~~~~Dv~slG~il~el~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (311)
T cd07866         203 RYTTAVDIWGIGCVFAEMFTRRPILQGKSD--IDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKL  280 (311)
T ss_pred             ccCchhHhHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccC
Confidence            467889999999999999999988753221  11111111110000   0000   0000    00  0000      00


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           68 GRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        68 ~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ...+.+++.+|++.+|.+||++.+++.
T Consensus       281 ~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         281 GPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             ChhHHHHHHHHcccCcccCcCHHHHhc
Confidence            126778999999999999999998864

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=98.70  E-value=2.7e-08  Score=70.87  Aligned_cols=78  Identities=17%  Similarity=0.063  Sum_probs=50.9

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++|+||+|++++++++|+.|+......   ........... ...   ..    |......+.+++.+||+.+|.
T Consensus       174 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~-~~~---~~----~~~~~~~~~~~i~~~l~~~p~  242 (258)
T cd05578         174 QGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT---IRDQIRAKQET-ADV---LY----PATWSTEAIDAINKLLERDPQ  242 (258)
T ss_pred             cCCCCcccchhhHHHHHHHHhCCCCCCCCCcc---HHHHHHHHhcc-ccc---cC----cccCcHHHHHHHHHHccCChh
Confidence            34688999999999999999999998633221   11111111111 111   11    222234788999999999999


Q ss_pred             CCCCH--HHHH
Q 047465           85 DRPTV--YDVV   93 (139)
Q Consensus        85 ~Rps~--~~v~   93 (139)
                      +||++  .+++
T Consensus       243 ~R~~~~~~~l~  253 (258)
T cd05578         243 KRLGDNLKDLK  253 (258)
T ss_pred             HcCCccHHHHh
Confidence            99999  5543

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.70  E-value=4.6e-08  Score=69.15  Aligned_cols=73  Identities=16%  Similarity=0.083  Sum_probs=49.1

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ...+.++|+|+||++++++++|+.|+.....  .....   .... ...    .+    +......+.+++..||..+|+
T Consensus       168 ~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--~~~~~---~~~~-~~~----~~----~~~~~~~l~~~i~~~l~~~p~  233 (250)
T cd05123         168 KGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--KEIYE---KILK-DPL----RF----PEFLSPEARDLISGLLQKDPT  233 (250)
T ss_pred             CCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHH---HHhc-CCC----CC----CCCCCHHHHHHHHHHhcCCHh
Confidence            3457789999999999999999999853321  11111   1111 111    11    222234788999999999999


Q ss_pred             CCCCHHH
Q 047465           85 DRPTVYD   91 (139)
Q Consensus        85 ~Rps~~~   91 (139)
                      +||++.+
T Consensus       234 ~R~~~~~  240 (250)
T cd05123         234 KRLGSGG  240 (250)
T ss_pred             hCCCccc
Confidence            9999944

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=98.70  E-value=7.7e-09  Score=76.55  Aligned_cols=77  Identities=12%  Similarity=0.119  Sum_probs=52.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ++.++.++||||+|++++||++|+.||.....  ...   .........     .+    |......+.+++.+|++.+|
T Consensus       170 ~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~--~~~---~~~i~~~~~-----~~----p~~~~~~~~~li~~~L~~dP  235 (325)
T cd05594         170 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKL---FELILMEEI-----RF----PRTLSPEAKSLLSGLLKKDP  235 (325)
T ss_pred             cCCCCCccccccccceeeeeccCCCCCCCCCH--HHH---HHHHhcCCC-----CC----CCCCCHHHHHHHHHHhhcCH
Confidence            45678999999999999999999999853211  111   111111111     11    22233378899999999999


Q ss_pred             CCCC-----CHHHHHH
Q 047465           84 DDRP-----TVYDVVS   94 (139)
Q Consensus        84 ~~Rp-----s~~~v~~   94 (139)
                      ++|+     ++.+++.
T Consensus       236 ~~R~~~~~~~~~~il~  251 (325)
T cd05594         236 KQRLGGGPDDAKEIMQ  251 (325)
T ss_pred             HHhCCCCCCCHHHHhc
Confidence            9996     8888874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.70  E-value=4.4e-08  Score=73.04  Aligned_cols=87  Identities=14%  Similarity=0.067  Sum_probs=50.1

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhc-----------cchh-hhhhhhc-cCC------CC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANS-----------HIFL-CLWLIIN-LRH------GI   66 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~-~~~~~~d-~~p------~~   66 (139)
                      .++.++||||+|++++|+++|+.|+.....  .............           .... .+..+.. .++      ..
T Consensus       192 ~~~~~~DvwslGv~l~elltg~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (343)
T cd07851         192 HYNQTVDIWSVGCIMAELLTGKTLFPGSDH--IDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSG  269 (343)
T ss_pred             CCCchHhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhcc
Confidence            467899999999999999999998853221  1100000000000           0000 0000000 000      01


Q ss_pred             CHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           67 YGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        67 ~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ....+.+++.+|++.+|.+||++.+++.
T Consensus       270 ~s~~l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         270 ANPLAIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             CCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence            1237789999999999999999999865

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=98.70  E-value=2.2e-08  Score=72.45  Aligned_cols=79  Identities=18%  Similarity=0.323  Sum_probs=54.5

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCC-CHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGI-YGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~-~~~~~~~l~~~C~~~~p   83 (139)
                      ..|..++||||||+.++|+.+|+.|+.....+. ....   ...+ .. +   +.++  +.. ....+.++...|++.|+
T Consensus       269 ~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdF-e~lt---kvln-~e-P---P~L~--~~~gFSp~F~~fv~~CL~kd~  337 (391)
T KOG0983|consen  269 PKYDIRADVWSLGITLVELATGQYPYKGCKTDF-EVLT---KVLN-EE-P---PLLP--GHMGFSPDFQSFVKDCLTKDH  337 (391)
T ss_pred             CccchhhhhhhhccchhhhhcccCCCCCCCccH-HHHH---HHHh-cC-C---CCCC--cccCcCHHHHHHHHHHhhcCc
Confidence            357889999999999999999999997543321 1111   1121 11 1   2222  222 33488999999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||...++++
T Consensus       338 r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  338 RKRPKYNKLLE  348 (391)
T ss_pred             ccCcchHHHhc
Confidence            99999998865

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=98.69  E-value=3.1e-08  Score=72.69  Aligned_cols=87  Identities=14%  Similarity=0.077  Sum_probs=51.1

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhh-------------------hccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLI-------------------INLRHG   65 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~d~~p~   65 (139)
                      ..++.++||||+|++++||++|+.||......  .................++.+                   .+..+.
T Consensus       180 ~~~~~~~DiwslG~il~el~tg~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (309)
T cd07872         180 SEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE--DELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPR  257 (309)
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccC
Confidence            35788999999999999999999988533211  111111110000000000000                   000011


Q ss_pred             CCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           66 IYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        66 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      + ...+.+++.+|++.+|.+||++.+++.
T Consensus       258 ~-~~~~~~li~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         258 L-DTEGIELLTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             C-CHHHHHHHHHhccCChhhCCCHHHHhc
Confidence            1 226788999999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=98.69  E-value=2e-08  Score=74.36  Aligned_cols=77  Identities=18%  Similarity=0.144  Sum_probs=50.3

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|+++|||++|+.||.....  .   ........ ...    . ..  +.+ ...+.++...|++.+|
T Consensus       170 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~---~~~~~i~~-~~~----~-~~--~~~-~~~~~~li~~~l~~~p  235 (325)
T cd05602         170 KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT--A---EMYDNILN-KPL----Q-LK--PNI-TNSARHLLEGLLQKDR  235 (325)
T ss_pred             CCCCCCccccccccHHHHHHhcCCCCCCCCCH--H---HHHHHHHh-CCc----C-CC--CCC-CHHHHHHHHHHcccCH
Confidence            45678899999999999999999999853211  1   11111111 111    1 01  222 2377889999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+|++..+.+.
T Consensus       236 ~~R~~~~~~~~  246 (325)
T cd05602         236 TKRLGAKDDFM  246 (325)
T ss_pred             HHCCCCCCCHH
Confidence            99998875443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=98.69  E-value=3.8e-08  Score=74.34  Aligned_cols=80  Identities=16%  Similarity=0.146  Sum_probs=52.2

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      .++.++||||+||+++||++|+.||.....     ..............   .+.+  .......+.+++..|++.+|.+
T Consensus       223 ~~~~~~DiwSlGvilyelltG~~Pf~~~~~-----~~~~~~i~~~~~~~---~~~~--~~~~s~~~~~li~~~L~~~p~r  292 (370)
T cd05596         223 YYGRECDWWSVGVFLYEMLVGDTPFYADSL-----VGTYSKIMDHKNSL---TFPD--DIEISKQAKDLICAFLTDREVR  292 (370)
T ss_pred             CCCCceeeeehhHHHHHHHhCCCCcCCCCH-----HHHHHHHHcCCCcC---CCCC--cCCCCHHHHHHHHHHccChhhc
Confidence            477899999999999999999999853211     11111222111111   1111  1122347888999999988987


Q ss_pred             --CCCHHHHHHH
Q 047465           86 --RPTVYDVVSM   95 (139)
Q Consensus        86 --Rps~~~v~~~   95 (139)
                        |+++.+++..
T Consensus       293 ~~R~s~~ell~h  304 (370)
T cd05596         293 LGRNGVDEIKSH  304 (370)
T ss_pred             cCCCCHHHHhcC
Confidence              9999999753

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.69  E-value=3.7e-08  Score=77.46  Aligned_cols=76  Identities=16%  Similarity=0.093  Sum_probs=54.0

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ...+++++|+||+|+++++|++|+.|+.....+    .+ +...+..+....  .+.+        ...++..+|++.+|
T Consensus       487 ~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~----~e-i~~~i~~~~~s~--~vS~--------~AKdLl~~LL~~dP  551 (612)
T KOG0603|consen  487 IQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG----IE-IHTRIQMPKFSE--CVSD--------EAKDLLQQLLQVDP  551 (612)
T ss_pred             cCCCCcchhhHHHHHHHHHHHhCCCccccCCch----HH-HHHhhcCCcccc--ccCH--------HHHHHHHHhccCCh
Confidence            446899999999999999999999998644332    11 222222222110  2222        78889999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+|+++.++..
T Consensus       552 ~~Rl~~~~i~~  562 (612)
T KOG0603|consen  552 ALRLGADEIGA  562 (612)
T ss_pred             hhCcChhhhcc
Confidence            99999998864

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.69  E-value=5.3e-08  Score=72.61  Aligned_cols=85  Identities=13%  Similarity=0.050  Sum_probs=50.1

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHH------------------HHhh-ccch--hhhhhhhccC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYL------------------RVAN-SHIF--LCLWLIINLR   63 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~------------------~~~~-~~~~--~~~~~~~d~~   63 (139)
                      ..++.++||||+|++++++++|+.||....... .......                  .... ....  ..+..+.   
T Consensus       194 ~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  269 (342)
T cd07854         194 NNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELE-QMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLL---  269 (342)
T ss_pred             cccCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHc---
Confidence            346788999999999999999999985322110 0000000                  0000 0000  0000000   


Q ss_pred             CCCCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           64 HGIYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        64 p~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      +. ....+.+++..|++.+|.+||++.+++.
T Consensus       270 ~~-~~~~~~~li~~~L~~dP~~R~t~~ell~  299 (342)
T cd07854         270 PG-VNPEALDFLEQILTFNPMDRLTAEEALM  299 (342)
T ss_pred             cC-CCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence            11 1126778999999999999999999974

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=98.68  E-value=7.1e-08  Score=69.99  Aligned_cols=86  Identities=8%  Similarity=-0.029  Sum_probs=49.6

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhh------------h-----hhccCCCCCH
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLW------------L-----IINLRHGIYG   68 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~-----~~d~~p~~~~   68 (139)
                      .++.++|+||||++++++++|..|+..... ...... +...........+.            .     ....++. ..
T Consensus       188 ~~~~~~Di~slG~~l~~l~~g~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  264 (295)
T cd07837         188 HYSTPVDIWSVGCIFAEMSRKQPLFPGDSE-LQQLLH-IFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPD-LS  264 (295)
T ss_pred             CCCchHHHHHHHHHHHHHHcCCCCCCCCCH-HHHHHH-HHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccc-cC
Confidence            467899999999999999999988753211 111111 00000000000000            0     0000011 12


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           69 RTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        69 ~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ..+.+++.+|+..+|.+||++.+++.
T Consensus       265 ~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         265 PEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             HHHHHHHHHHccCChhhcCCHHHHhc
Confidence            26788999999999999999998864

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>PHA03209 serine/threonine kinase US3; Provisional

Probab=98.68  E-value=6e-08  Score=72.85  Aligned_cols=28  Identities=25%  Similarity=0.504  Sum_probs=23.1

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNT   30 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~   30 (139)
                      .+..++.++||||||+++||++++..++
T Consensus       229 ~~~~~~~~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        229 ARDKYNSKADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             CCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence            3456789999999999999999865554

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=98.66  E-value=9.3e-08  Score=69.30  Aligned_cols=88  Identities=14%  Similarity=0.041  Sum_probs=49.8

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhh-------------------hhhccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLW-------------------LIINLRHGI   66 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~d~~p~~   66 (139)
                      .++.++||||+|+++|+|++|+.++...... ..........+.......+.                   .+....+.+
T Consensus       180 ~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (291)
T cd07844         180 EYSTSLDMWGVGCIFYEMATGRPLFPGSTDV-EDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRL  258 (291)
T ss_pred             ccCcHHHHHHHHHHHHHHHhCCCCCCCCccH-HHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCC
Confidence            4678899999999999999999888533211 11111111110000000000                   000000111


Q ss_pred             C-HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           67 Y-GRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        67 ~-~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      . ...+.+++..|++.+|.+||++.+++.
T Consensus       259 ~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         259 DRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             CCchhHHHHHHHHhccCcccccCHHHHhc
Confidence            1 026678999999999999999998764

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=98.66  E-value=4.4e-08  Score=72.55  Aligned_cols=72  Identities=13%  Similarity=0.075  Sum_probs=48.2

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ++.++.++|+||+|+++|||++|+.|+.....  ..   ....... ...    ..    |......+.+++.+|++.+|
T Consensus       175 ~~~~~~~~DiwslGvil~elltG~~pf~~~~~--~~---~~~~i~~-~~~----~~----p~~~~~~~~~li~~~l~~~p  240 (323)
T cd05615         175 YQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE--DE---LFQSIME-HNV----SY----PKSLSKEAVSICKGLMTKHP  240 (323)
T ss_pred             CCCCCCccchhhhHHHHHHHHhCCCCCCCCCH--HH---HHHHHHh-CCC----CC----CccCCHHHHHHHHHHcccCH
Confidence            45678899999999999999999999853221  11   1111111 111    11    22223377889999999999


Q ss_pred             CCCCCH
Q 047465           84 DDRPTV   89 (139)
Q Consensus        84 ~~Rps~   89 (139)
                      .+|++.
T Consensus       241 ~~R~~~  246 (323)
T cd05615         241 SKRLGC  246 (323)
T ss_pred             hhCCCC
Confidence            999975

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=98.66  E-value=4.5e-08  Score=73.18  Aligned_cols=78  Identities=15%  Similarity=0.106  Sum_probs=52.0

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++|+||+|+++|||++|+.||.....  .   . ....+..+..    ..    |......+.+++..|++.+|
T Consensus       202 ~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~--~---~-~~~~i~~~~~----~~----p~~~~~~~~~li~~~l~~dp  267 (340)
T PTZ00426        202 NVGHGKAADWWTLGIFIYEILVGCPPFYANEP--L---L-IYQKILEGII----YF----PKFLDNNCKHLMKKLLSHDL  267 (340)
T ss_pred             CCCCCccccccchhhHHHHHhcCCCCCCCCCH--H---H-HHHHHhcCCC----CC----CCCCCHHHHHHHHHHcccCH
Confidence            34567899999999999999999999853211  1   1 1111111211    11    22223377889999999999


Q ss_pred             CCCC-----CHHHHHHH
Q 047465           84 DDRP-----TVYDVVSM   95 (139)
Q Consensus        84 ~~Rp-----s~~~v~~~   95 (139)
                      .+|+     ++.+++..
T Consensus       268 ~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        268 TKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             HHcCCCCCCCHHHHHcC
Confidence            9995     78887653

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=98.66  E-value=7.2e-08  Score=69.76  Aligned_cols=78  Identities=15%  Similarity=0.148  Sum_probs=51.7

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      .++.++|+||+|++++|+++|+.|+.........  . ...... ....   .+    |......+.++..+|+..+|.+
T Consensus       172 ~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~--~-~~~~~~-~~~~---~~----~~~~s~~~~~li~~~l~~~p~~  240 (278)
T cd05606         172 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--E-IDRMTL-TMAV---EL----PDSFSPELRSLLEGLLQRDVNR  240 (278)
T ss_pred             CCCcccchHhHHHHHHHHHhCCCCCCCCCccchH--H-HHHHhh-ccCC---CC----CCcCCHHHHHHHHHHhhcCHHh
Confidence            5788999999999999999999998643221111  1 111110 1111   11    2222347888999999999999


Q ss_pred             CC-----CHHHHHH
Q 047465           86 RP-----TVYDVVS   94 (139)
Q Consensus        86 Rp-----s~~~v~~   94 (139)
                      ||     ++.+++.
T Consensus       241 R~~~~~~~~~~ll~  254 (278)
T cd05606         241 RLGCLGRGAQEVKE  254 (278)
T ss_pred             ccCCCCCCHHHHHh
Confidence            99     8888864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=98.66  E-value=9.3e-08  Score=70.63  Aligned_cols=90  Identities=14%  Similarity=0.005  Sum_probs=53.9

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhh-----------------------ccchhhhhhhhcc
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVAN-----------------------SHIFLCLWLIINL   62 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~d~   62 (139)
                      .++.++|+||+|++++++++|+.||......  .....+.....                       ......+....  
T Consensus       183 ~~~~~sDi~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  258 (330)
T cd07834         183 RYTKAIDIWSVGCIFAELLTRKPLFPGRDYI--DQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLF--  258 (330)
T ss_pred             CCCcchhHHHHHHHHHHHHcCCCCcCCCCHH--HHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhc--
Confidence            5678899999999999999999988533211  00011100000                       00000000000  


Q ss_pred             CCCCCHHHHHHHHHHhcccCCCCCCCHHHHHH--HHhcccC
Q 047465           63 RHGIYGRTTGHWTLLCAQESADDRPTVYDVVS--MLTNEAT  101 (139)
Q Consensus        63 ~p~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~--~L~~~~~  101 (139)
                       +. ....+.+++.+||+.+|.+||++.+++.  ++++...
T Consensus       259 -~~-~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~  297 (330)
T cd07834         259 -PG-ASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD  297 (330)
T ss_pred             -cc-CCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence             11 1226788999999999999999999986  3554433

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.66  E-value=9.4e-09  Score=82.28  Aligned_cols=75  Identities=19%  Similarity=0.293  Sum_probs=52.1

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCH---HHHHHHHHHhcccCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYG---RTTGHWTLLCAQESA   83 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~---~~~~~l~~~C~~~~p   83 (139)
                      |..++|||||||.+.||.+|+.||-....  .   ..+....  |-..     ..  |.+++   .....+.++|+..+|
T Consensus       755 YG~aADIWS~GCT~vEMATGrPPF~Elgs--p---qAAMFkV--GmyK-----vH--P~iPeelsaeak~FilrcFepd~  820 (1226)
T KOG4279|consen  755 YGKAADIWSFGCTMVEMATGRPPFVELGS--P---QAAMFKV--GMYK-----VH--PPIPEELSAEAKNFILRCFEPDP  820 (1226)
T ss_pred             CCchhhhhhccceeEeeccCCCCeeecCC--h---hHhhhhh--ccee-----cC--CCCcHHHHHHHHHHHHHHcCCCc
Confidence            77899999999999999999999853222  1   1111111  1100     01  33333   277889999999999


Q ss_pred             CCCCCHHHHHHH
Q 047465           84 DDRPTVYDVVSM   95 (139)
Q Consensus        84 ~~Rps~~~v~~~   95 (139)
                      .+||++++++..
T Consensus       821 ~~R~sA~~LL~D  832 (1226)
T KOG4279|consen  821 CDRPSAKDLLQD  832 (1226)
T ss_pred             ccCccHHHhccC
Confidence            999999999864

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=98.65  E-value=1.7e-08  Score=74.76  Aligned_cols=75  Identities=13%  Similarity=0.107  Sum_probs=49.2

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .++.++.++||||+|++++||++|+.||.....     ......... ....     ..  +.. ...+.+++..|++.+
T Consensus       169 ~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~-----~~~~~~~~~-~~~~-----~~--~~~-~~~~~~ll~~ll~~~  234 (325)
T cd05604         169 RKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV-----AEMYDNILH-KPLV-----LR--PGA-SLTAWSILEELLEKD  234 (325)
T ss_pred             cCCCCCCcCccccccceehhhhcCCCCCCCCCH-----HHHHHHHHc-CCcc-----CC--CCC-CHHHHHHHHHHhccC
Confidence            345678899999999999999999999853211     111111111 1111     01  222 236788999999999


Q ss_pred             CCCCCCHHH
Q 047465           83 ADDRPTVYD   91 (139)
Q Consensus        83 p~~Rps~~~   91 (139)
                      |.+||++.+
T Consensus       235 p~~R~~~~~  243 (325)
T cd05604         235 RQRRLGAKE  243 (325)
T ss_pred             HHhcCCCCC
Confidence            999998754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=98.65  E-value=3.3e-08  Score=73.02  Aligned_cols=73  Identities=14%  Similarity=0.076  Sum_probs=48.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|++++||++|+.||....     .......... .. .   .+    |......+.+++..|++.+|
T Consensus       170 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i~~-~~-~---~~----~~~~~~~~~~li~~~l~~~p  235 (321)
T cd05603         170 KEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-----VSQMYDNILH-KP-L---QL----PGGKTVAACDLLVGLLHKDQ  235 (321)
T ss_pred             CCCCCCcCcccccchhhhhhhcCCCCCCCCC-----HHHHHHHHhc-CC-C---CC----CCCCCHHHHHHHHHHccCCH
Confidence            4467889999999999999999999985321     1111111111 11 1   11    22223378889999999999


Q ss_pred             CCCCCHH
Q 047465           84 DDRPTVY   90 (139)
Q Consensus        84 ~~Rps~~   90 (139)
                      .+|++..
T Consensus       236 ~~R~~~~  242 (321)
T cd05603         236 RRRLGAK  242 (321)
T ss_pred             hhcCCCC
Confidence            9998764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=98.65  E-value=1.2e-07  Score=68.89  Aligned_cols=86  Identities=13%  Similarity=-0.002  Sum_probs=49.8

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhh------hhh-------hhc-----cCCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLC------LWL-------IIN-----LRHGIY   67 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-------~~d-----~~p~~~   67 (139)
                      .++.++||||+|++++++++|+.|+.....  ..................      ++.       +..     ..+.. 
T Consensus       180 ~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  256 (294)
T PLN00009        180 HYSTPVDIWSVGCIFAEMVNQKPLFPGDSE--IDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTL-  256 (294)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCC-
Confidence            467899999999999999999988753211  110100100000000000      000       000     00111 


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           68 GRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        68 ~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ...+.+++.+|++.+|.+||++.+++.
T Consensus       257 ~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        257 EPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             ChHHHHHHHHHccCChhhCcCHHHHhc
Confidence            126788999999999999999999875

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.65  E-value=5e-08  Score=76.69  Aligned_cols=79  Identities=11%  Similarity=0.177  Sum_probs=57.0

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..|.+.+|||||||+++||+|+.-|+.     .......++..+..|..+   .-+.   .+...++.++..+|+.. ..
T Consensus       218 E~YnE~VDVYaFGMCmLEMvT~eYPYs-----EC~n~AQIYKKV~SGiKP---~sl~---kV~dPevr~fIekCl~~-~~  285 (632)
T KOG0584|consen  218 ENYNELVDVYAFGMCMLEMVTSEYPYS-----ECTNPAQIYKKVTSGIKP---AALS---KVKDPEVREFIEKCLAT-KS  285 (632)
T ss_pred             hhcchhhhhhhhhHHHHHHHhccCChh-----hhCCHHHHHHHHHcCCCH---HHhh---ccCCHHHHHHHHHHhcC-ch
Confidence            458899999999999999999999986     222233344444445443   2221   22223889999999998 89


Q ss_pred             CCCCHHHHHHH
Q 047465           85 DRPTVYDVVSM   95 (139)
Q Consensus        85 ~Rps~~~v~~~   95 (139)
                      +|+++.+++..
T Consensus       286 ~R~sa~eLL~d  296 (632)
T KOG0584|consen  286 ERLSAKELLKD  296 (632)
T ss_pred             hccCHHHHhhC
Confidence            99999999863

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=98.64  E-value=8e-08  Score=71.33  Aligned_cols=87  Identities=14%  Similarity=0.032  Sum_probs=50.9

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHh-----------hccchhhhhhhhccC---------C
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVA-----------NSHIFLCLWLIINLR---------H   64 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~d~~---------p   64 (139)
                      ..++.++||||||++++|+++|+.||......  ..........           ..............+         +
T Consensus       187 ~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (334)
T cd07855         187 PEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV--HQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFP  264 (334)
T ss_pred             cccccccchHHHHHHHHHHHcCCCccCCCChH--HHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcc
Confidence            34678999999999999999999998532211  0000000000           000000000000000         1


Q ss_pred             CCCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           65 GIYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        65 ~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      .. ...+..++.+|++.+|.+||++.+++.
T Consensus       265 ~~-~~~~~~li~~~l~~~P~~Rpt~~~~l~  293 (334)
T cd07855         265 KA-SPEALDLLSQMLQFDPEERITVEQALQ  293 (334)
T ss_pred             cC-CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            11 227889999999999999999999876

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.64  E-value=1.3e-07  Score=67.72  Aligned_cols=78  Identities=14%  Similarity=0.152  Sum_probs=50.0

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++|+||||++++++++|+.|+.....     ...+..........   .+    |......+.+++.+||+ ++
T Consensus       183 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~---~~----p~~~~~~~~~~i~~~l~-~~  249 (264)
T cd06653         183 GEGYGRKADVWSVACTVVEMLTEKPPWAEYEA-----MAAIFKIATQPTKP---ML----PDGVSDACRDFLKQIFV-EE  249 (264)
T ss_pred             CCCCCccccHHHHHHHHHHHHhCCCCCCccCH-----HHHHHHHHcCCCCC---CC----CcccCHHHHHHHHHHhc-Cc
Confidence            34567889999999999999999999853211     11111111111111   11    22222378889999999 57


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      ..||+..+++.
T Consensus       250 ~~r~~~~~~~~  260 (264)
T cd06653         250 KRRPTAEFLLR  260 (264)
T ss_pred             ccCccHHHHhc
Confidence            99999997754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=98.64  E-value=8.3e-08  Score=71.81  Aligned_cols=29  Identities=24%  Similarity=0.267  Sum_probs=25.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEF   32 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~   32 (139)
                      +..++.++||||+|+++++|++|+.||..
T Consensus       191 ~~~~~~~~DvwslG~~l~~l~~g~~pf~~  219 (353)
T cd07850         191 GMGYKENVDIWSVGCIMGEMIRGTVLFPG  219 (353)
T ss_pred             CCCCCCchhhHhHHHHHHHHHHCCCCCCC
Confidence            34578899999999999999999988853

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=98.64  E-value=6.1e-08  Score=70.93  Aligned_cols=88  Identities=18%  Similarity=0.175  Sum_probs=53.7

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcC-chHHHHHHHH--------Hhhcc-ch--hhhhhhhccCCCCCHH---
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTD-SLIFVIYYLR--------VANSH-IF--LCLWLIINLRHGIYGR---   69 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~-~~~~~~~~~~--------~~~~~-~~--~~~~~~~d~~p~~~~~---   69 (139)
                      ..|...+||||+||++.||++|..-|+...+- .++++..+..        .+... ..  .-+++.-+  +...+.   
T Consensus       177 tqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~--~epLe~k~p  254 (396)
T KOG0593|consen  177 TQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEH--PEPLERKYP  254 (396)
T ss_pred             CcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCC--ccchhhhcc
Confidence            46889999999999999999999887643221 2232222211        01110 00  00001111  111111   


Q ss_pred             ----HHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           70 ----TTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        70 ----~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                          .+.+++..|+++||++|++.++++.
T Consensus       255 ~~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  255 KISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             cchHHHHHHHHHHhcCCccccccHHHHhc
Confidence                6789999999999999999999874

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=98.63  E-value=1.9e-07  Score=67.04  Aligned_cols=86  Identities=12%  Similarity=0.050  Sum_probs=50.1

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhh-------------hhh-----ccCCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLW-------------LII-----NLRHGIY   67 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~-----d~~p~~~   67 (139)
                      .++.++|||++|++++|+++|+.++.....  ......+...........+.             ...     +.-+.. 
T Consensus       175 ~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  251 (282)
T cd07829         175 HYSTAVDIWSVGCIFAEMITGKPLFPGDSE--IDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRL-  251 (282)
T ss_pred             CCCccccHHHHHHHHHHHHhCCCCCCCccH--HHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccc-
Confidence            677899999999999999999888743211  11111110000000000000             000     000111 


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           68 GRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        68 ~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ...+.+++..||..+|.+||++.+++.
T Consensus       252 ~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         252 DPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             cHHHHHHHHHhhccCcccCCCHHHHhh
Confidence            227889999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=98.62  E-value=1.1e-07  Score=69.05  Aligned_cols=75  Identities=15%  Similarity=0.096  Sum_probs=49.1

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ...+.++|+||+|++++++++|+.|+.....     .. .......+. .   .+    |......+.++...||+.+|.
T Consensus       173 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~-~~~~~~~~~-~---~~----~~~~~~~l~~li~~~l~~~p~  238 (290)
T cd05580         173 KGYGKAVDWWALGILIYEMLAGYPPFFDDNP-----IQ-IYEKILEGK-V---RF----PSFFSPDAKDLIRNLLQVDLT  238 (290)
T ss_pred             CCCCccccHHHHHHHHHHHHhCCCCCCCCCH-----HH-HHHHHhcCC-c---cC----CccCCHHHHHHHHHHccCCHH
Confidence            3467789999999999999999998853221     11 111111111 1   11    222233788899999999999


Q ss_pred             CCC-----CHHHHH
Q 047465           85 DRP-----TVYDVV   93 (139)
Q Consensus        85 ~Rp-----s~~~v~   93 (139)
                      +|+     ++.+++
T Consensus       239 ~R~~~~~~~~~~l~  252 (290)
T cd05580         239 KRLGNLKNGVNDIK  252 (290)
T ss_pred             HccCcccCCHHHHH
Confidence            998     666665

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=98.62  E-value=1.1e-07  Score=69.95  Aligned_cols=26  Identities=19%  Similarity=0.445  Sum_probs=23.7

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTE   31 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~   31 (139)
                      .++.++||||+|++++||++|+.||.
T Consensus       192 ~~~~~~DiwslG~il~el~~g~~~f~  217 (317)
T cd07868         192 HYTKAIDIWAIGCIFAELLTSEPIFH  217 (317)
T ss_pred             CcCchhhHHHHHHHHHHHHhCCCCcc
Confidence            47889999999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=98.61  E-value=7.6e-08  Score=69.90  Aligned_cols=84  Identities=12%  Similarity=0.020  Sum_probs=49.3

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhh-----------c------c-----chhhhhhhhccCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVAN-----------S------H-----IFLCLWLIINLRH   64 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~------~-----~~~~~~~~~d~~p   64 (139)
                      ++.++|+||+|++++|+++|+.++.....  ......+.....           .      .     ....+...+.  .
T Consensus       184 ~~~~~Di~slG~~l~~l~~g~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  259 (293)
T cd07843         184 YSTAIDMWSVGCIFAELLTKKPLFPGKSE--IDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFP--A  259 (293)
T ss_pred             ccchhhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhcccc--c
Confidence            57889999999999999999988753221  111111100000           0      0     0000000000  0


Q ss_pred             CCCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           65 GIYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        65 ~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ......+.+++.+||+.+|++||++.+++.
T Consensus       260 ~~~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         260 LSLSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             cCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence            101226778999999999999999999864

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=98.61  E-value=1.6e-07  Score=67.74  Aligned_cols=86  Identities=9%  Similarity=-0.016  Sum_probs=49.4

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhh---------hhhc----------cCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLW---------LIIN----------LRHGI   66 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~d----------~~p~~   66 (139)
                      .++.++||||+|++++|+++|+.++.....  ..................++         .+..          ..+..
T Consensus       177 ~~~~~~Di~slG~~l~~l~tg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (286)
T cd07832         177 KYDPGVDLWAVGCIFAELLNGSPLFPGEND--IEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDA  254 (286)
T ss_pred             cCCchhHHHHHHHHHHHHHcCCcCcCCCCH--HHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCc
Confidence            357899999999999999999766642211  11111111111000000000         0000          00111


Q ss_pred             CHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           67 YGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        67 ~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                       ...+.+++..|++.+|.+||++++++.
T Consensus       255 -~~~~~~li~~~l~~~p~~R~~~~~~l~  281 (286)
T cd07832         255 -SPEALDLLKGLLVYDPSKRLSAAEALR  281 (286)
T ss_pred             -cHHHHHHHHHHhccChhhCCCHHHHhh
Confidence             137788999999999999999998875

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=98.61  E-value=1.3e-07  Score=69.36  Aligned_cols=87  Identities=8%  Similarity=0.026  Sum_probs=50.4

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhh-----------hhhc-------cCCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLW-----------LIIN-------LRHGIY   67 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~d-------~~p~~~   67 (139)
                      .++.++||||+|+++||+++|+.|+.....  ......+...........++           .+..       .+....
T Consensus       185 ~~~~~~DvwslG~il~el~~g~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (309)
T cd07845         185 TYTTAIDMWAVGCILAELLAHKPLLPGKSE--IEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWL  262 (309)
T ss_pred             CcCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhcccc
Confidence            467899999999999999999988853221  11111111100000000000           0000       000001


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           68 GRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        68 ~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ...+.+++..|++.||.+||++.+++.
T Consensus       263 ~~~~~~li~~ml~~dp~~R~t~~~il~  289 (309)
T cd07845         263 SEAGLRLLNFLLMYDPKKRATAEEALE  289 (309)
T ss_pred             CHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            236778999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=98.61  E-value=1.3e-07  Score=70.29  Aligned_cols=88  Identities=15%  Similarity=0.018  Sum_probs=50.2

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhc-----------cchh----hhhhhhc----cCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANS-----------HIFL----CLWLIIN----LRHG   65 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~----~~~~~~d----~~p~   65 (139)
                      ..++.++||||+|+++++|++|+.||.....  .............           ....    .+.....    ....
T Consensus       191 ~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (343)
T cd07878         191 MHYNQTVDIWSVGCIMAELLKGKALFPGNDY--IDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFR  268 (343)
T ss_pred             ccCCchhhhHhHHHHHHHHHHCCCCCCCCCH--HHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhcc
Confidence            3578899999999999999999998853221  1101101000000           0000    0000000    0000


Q ss_pred             CCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           66 IYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        66 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      .....+.+++.+|+..+|.+||++.+++.
T Consensus       269 ~~~~~~~~li~~mL~~dp~~R~s~~ell~  297 (343)
T cd07878         269 GANPLAIDLLEKMLVLDSDKRISASEALA  297 (343)
T ss_pred             CCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            01125678999999999999999999985

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=98.60  E-value=1.1e-07  Score=69.52  Aligned_cols=27  Identities=19%  Similarity=0.315  Sum_probs=23.9

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCc
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEF   32 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~   32 (139)
                      .++.++||||||++++++++|+.|+..
T Consensus       192 ~~~~~~Dv~slG~~l~~l~~~~~~~~~  218 (316)
T cd07842         192 HYTKAIDIWAIGCIFAELLTLEPIFKG  218 (316)
T ss_pred             CCCcHHHHHHHHHHHHHHHhcCCCCcC
Confidence            467889999999999999999988853

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>PHA03212 serine/threonine kinase US3; Provisional

Probab=98.60  E-value=1.5e-07  Score=71.79  Aligned_cols=27  Identities=19%  Similarity=0.432  Sum_probs=23.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNT   30 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~   30 (139)
                      +..++.++||||+|+++||+++|+.|+
T Consensus       257 ~~~~~~~~DiwSlGvil~elltg~~p~  283 (391)
T PHA03212        257 RDPYGPAVDIWSAGIVLFEMATCHDSL  283 (391)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHCCCCc
Confidence            456788999999999999999998775

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=98.60  E-value=5.4e-08  Score=80.74  Aligned_cols=87  Identities=14%  Similarity=0.044  Sum_probs=53.6

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .+..++.++||||+|++++||++|+.|+........  ..  .....  ...   ....  ....+..+..++.+|++.+
T Consensus       204 ~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki--~~--~~~i~--~P~---~~~p--~~~iP~~L~~LI~rcL~~D  272 (932)
T PRK13184        204 LGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKI--SY--RDVIL--SPI---EVAP--YREIPPFLSQIAMKALAVD  272 (932)
T ss_pred             cCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhh--hh--hhhcc--Chh---hccc--cccCCHHHHHHHHHHccCC
Confidence            345678899999999999999999999853211100  00  00000  000   1100  1111226788999999999


Q ss_pred             CCCCC-CHHHHHHHHhccc
Q 047465           83 ADDRP-TVYDVVSMLTNEA  100 (139)
Q Consensus        83 p~~Rp-s~~~v~~~L~~~~  100 (139)
                      |++|+ ++.++...|+...
T Consensus       273 P~kR~ss~eeLl~~Le~~l  291 (932)
T PRK13184        273 PAERYSSVQELKQDLEPHL  291 (932)
T ss_pred             hhhCcCHHHHHHHHHHHHH
Confidence            99995 5666666666543

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=98.60  E-value=1.2e-07  Score=71.87  Aligned_cols=82  Identities=20%  Similarity=0.148  Sum_probs=49.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHH--hccc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLL--CAQE   81 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~--C~~~   81 (139)
                      +..++.++||||+||+++||++|+.||......     .............   .+..  .......+.+++.+  |+..
T Consensus       222 ~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~-----~~~~~i~~~~~~~---~~~~--~~~~s~~~~dli~~ll~~~~  291 (381)
T cd05626         222 RKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPT-----ETQLKVINWENTL---HIPP--QVKLSPEAVDLITKLCCSAE  291 (381)
T ss_pred             CCCCCCccceeehhhHHHHHHhCCCCCcCCCHH-----HHHHHHHcccccc---CCCC--CCCCCHHHHHHHHHHccCcc
Confidence            345788999999999999999999998643211     1111111111111   1111  11122256666654  6777


Q ss_pred             CCCCCCCHHHHHHH
Q 047465           82 SADDRPTVYDVVSM   95 (139)
Q Consensus        82 ~p~~Rps~~~v~~~   95 (139)
                      ++..|+++.+++..
T Consensus       292 ~~~~R~~~~~~l~h  305 (381)
T cd05626         292 ERLGRNGADDIKAH  305 (381)
T ss_pred             cccCCCCHHHHhcC
Confidence            77789999999863

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.59  E-value=1.3e-07  Score=75.37  Aligned_cols=81  Identities=15%  Similarity=0.247  Sum_probs=60.3

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ....|.-++||||||+.+.||..+..|.....+      ..+...+.....+   .++.  |......+.++...|+..|
T Consensus       208 KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp------MRVllKiaKSePP---TLlq--PS~Ws~~F~DfLk~cL~Kn  276 (1187)
T KOG0579|consen  208 KDQPYDYKADIWSLGITLIEMAQIEPPHHELNP------MRVLLKIAKSEPP---TLLQ--PSHWSRSFSDFLKRCLVKN  276 (1187)
T ss_pred             cCCCchhhhhHHhhhhHHHHHhccCCCccccch------HHHHHHHhhcCCC---cccC--cchhhhHHHHHHHHHHhcC
Confidence            345688999999999999999999988653221      1222223334444   5555  6666668999999999999


Q ss_pred             CCCCCCHHHHHH
Q 047465           83 ADDRPTVYDVVS   94 (139)
Q Consensus        83 p~~Rps~~~v~~   94 (139)
                      |+.||+..++++
T Consensus       277 p~~Rp~aaqll~  288 (1187)
T KOG0579|consen  277 PRNRPPAAQLLK  288 (1187)
T ss_pred             CccCCCHHHHhh
Confidence            999999998875

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.58  E-value=1.8e-07  Score=67.88  Aligned_cols=77  Identities=16%  Similarity=0.067  Sum_probs=47.8

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDR   86 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~R   86 (139)
                      ++.++|||+||++++++++|+.|+..... ................     ..    +......+..++.+||+.+|++|
T Consensus       185 ~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-~~~~~~~~~~~~~~~~-----~~----~~~~~~~~~~ll~~~l~~~p~~R  254 (290)
T cd05613         185 HDKAVDWWSMGVLMYELLTGASPFTVDGE-KNSQAEISRRILKSEP-----PY----PQEMSALAKDIIQRLLMKDPKKR  254 (290)
T ss_pred             CCccccHHHHHHHHHHHhcCCCCCCcCCc-cccHHHHHHHhhccCC-----CC----CccCCHHHHHHHHHHhcCCHHHh
Confidence            56789999999999999999998853211 1111111111111111     11    22222377889999999999999


Q ss_pred             C-----CHHHHH
Q 047465           87 P-----TVYDVV   93 (139)
Q Consensus        87 p-----s~~~v~   93 (139)
                      |     +..+++
T Consensus       255 ~~~~~~~~~~l~  266 (290)
T cd05613         255 LGCGPSDADEIK  266 (290)
T ss_pred             cCCCCCCHHHHH
Confidence            7     555553

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PHA03211 serine/threonine kinase US3; Provisional

Probab=98.57  E-value=1.4e-07  Score=73.40  Aligned_cols=26  Identities=8%  Similarity=0.118  Sum_probs=23.3

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHH
Q 047465           70 TTGHWTLLCAQESADDRPTVYDVVSM   95 (139)
Q Consensus        70 ~~~~l~~~C~~~~p~~Rps~~~v~~~   95 (139)
                      .+.+++..|++.||.+||++.+++..
T Consensus       430 ~~~dli~~mL~~DP~~RPsa~elL~h  455 (461)
T PHA03211        430 DVEYLVCRALTFDGARRPSAAELLRL  455 (461)
T ss_pred             hHHHHHHHHcccChhhCcCHHHHhhC
Confidence            67789999999999999999999763

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=98.57  E-value=1.4e-07  Score=73.33  Aligned_cols=92  Identities=21%  Similarity=0.117  Sum_probs=59.2

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDR   86 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~R   86 (139)
                      .+.++|+||||++++|+++++.|++........ ...+......+....-+.+..  .......+..++..||..+|.+|
T Consensus       135 ~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~-~eii~~~~~~~~~~~rP~i~~--~~e~~~~l~~l~~~cw~e~P~~r  211 (484)
T KOG1023|consen  135 LTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDP-DEIILRVKKGGSNPFRPSIEL--LNELPPELLLLVARCWEEIPEKR  211 (484)
T ss_pred             ccccCCeehHHHHHHHHHhccCccccccccCCh-HHHHHHHHhcCCCCcCcchhh--hhhcchHHHHHHHHhcccChhhC
Confidence            578899999999999999999999753332111 122222111122110002221  10111168899999999999999


Q ss_pred             CCHHHHHHHHhcccC
Q 047465           87 PTVYDVVSMLTNEAT  101 (139)
Q Consensus        87 ps~~~v~~~L~~~~~  101 (139)
                      |++.++-..++....
T Consensus       212 Ps~~~i~~~~~~~~~  226 (484)
T KOG1023|consen  212 PSIEQIRSKLLTINK  226 (484)
T ss_pred             ccHHHHHhhhhhhcc
Confidence            999999888887665

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.57  E-value=1.9e-07  Score=69.31  Aligned_cols=89  Identities=15%  Similarity=0.039  Sum_probs=51.4

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHh-----------hccchh-hhhhhhccCC-------C
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVA-----------NSHIFL-CLWLIINLRH-------G   65 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-~~~~~~d~~p-------~   65 (139)
                      ..++.++|+|++|++++++++|+.|+...... ..+.. .....           ...... .+.......+       .
T Consensus       181 ~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (328)
T cd07856         181 QKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHV-NQFSI-ITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFK  258 (328)
T ss_pred             CCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHH-HHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcC
Confidence            35788999999999999999999888543221 00000 00000           000000 0000000000       0


Q ss_pred             CCHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047465           66 IYGRTTGHWTLLCAQESADDRPTVYDVVSM   95 (139)
Q Consensus        66 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~~   95 (139)
                      .....+..++.+|++.+|.+||++.+++..
T Consensus       259 ~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         259 NADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             CCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            112378899999999999999999988653

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=98.57  E-value=1.5e-07  Score=67.91  Aligned_cols=86  Identities=15%  Similarity=0.082  Sum_probs=49.2

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhcc---------chhhh-hhhh---c-----cCCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSH---------IFLCL-WLII---N-----LRHGIY   67 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~-~~~~---d-----~~p~~~   67 (139)
                      .++.++|+|++|++++++++|+.|+......  .............         ....+ ....   +     ..+.. 
T Consensus       177 ~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  253 (284)
T cd07836         177 TYSTSIDIWSVGCIMAEMITGRPLFPGTNNE--DQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHA-  253 (284)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH--HHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhc-
Confidence            4578999999999999999999887532211  1111010000000         00000 0000   0     00111 


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           68 GRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        68 ~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ...+.+++..|++.+|.+||++.+++.
T Consensus       254 ~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         254 DPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             CcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            126678999999999999999998864

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=98.56  E-value=3.1e-07  Score=68.07  Aligned_cols=87  Identities=9%  Similarity=-0.020  Sum_probs=50.6

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhh--------hc-cC-------CCCCHH
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLI--------IN-LR-------HGIYGR   69 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~d-~~-------p~~~~~   69 (139)
                      .++.++|+||+|++++|+++|+.|+.....  ......+..........-++..        .. ..       ......
T Consensus       210 ~~~~~~Dv~slG~~l~el~tg~~p~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (335)
T PTZ00024        210 KYHFAVDMWSVGCIFAELLTGKPLFPGENE--IDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASD  287 (335)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCCh
Confidence            367899999999999999999988753321  1111111111100000000000        00 00       001122


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           70 TTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        70 ~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      .+.+++..|++.+|.+||++.+++.
T Consensus       288 ~~~~li~~~l~~~P~~R~s~~~~l~  312 (335)
T PTZ00024        288 DAIDLLQSLLKLNPLERISAKEALK  312 (335)
T ss_pred             HHHHHHHHHcCCCchhccCHHHHhc
Confidence            6788999999999999999999975

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=98.55  E-value=2.5e-07  Score=71.97  Aligned_cols=79  Identities=15%  Similarity=0.157  Sum_probs=54.2

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ..+..+..+|+|+|||++++|+.|..||....+ ...+..    .+.-..     ++    |......+.+|....+..+
T Consensus       260 ~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne-yliFqk----I~~l~y-----~f----p~~fp~~a~dLv~KLLv~d  325 (604)
T KOG0592|consen  260 NDSPAGPSSDLWALGCILYQMLAGQPPFRAANE-YLIFQK----IQALDY-----EF----PEGFPEDARDLIKKLLVRD  325 (604)
T ss_pred             cCCCCCcccchHHHHHHHHHHhcCCCCCccccH-HHHHHH----HHHhcc-----cC----CCCCCHHHHHHHHHHHccC
Confidence            456678899999999999999999999954322 111111    111111     11    2222236778888999999


Q ss_pred             CCCCCCHHHHHHH
Q 047465           83 ADDRPTVYDVVSM   95 (139)
Q Consensus        83 p~~Rps~~~v~~~   95 (139)
                      |.+|.+..++.+.
T Consensus       326 p~~Rlt~~qIk~H  338 (604)
T KOG0592|consen  326 PSDRLTSQQIKAH  338 (604)
T ss_pred             ccccccHHHHhhC
Confidence            9999999988764

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=98.55  E-value=8.2e-08  Score=71.15  Aligned_cols=103  Identities=14%  Similarity=0.006  Sum_probs=60.5

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcC-chHHHHHHHH--------Hhhccchh-hhhhhhccCCCCC-----
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTD-SLIFVIYYLR--------VANSHIFL-CLWLIINLRHGIY-----   67 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~-~~~~~~~~~~--------~~~~~~~~-~~~~~~d~~p~~~-----   67 (139)
                      ....|+.+.||||.||++.||++|+.-|+..+.- +..++..+..        .+...... -+.... .+|...     
T Consensus       201 ~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp-~~p~~~f~~~f  279 (359)
T KOG0660|consen  201 NSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLP-QIPKQPFSSIF  279 (359)
T ss_pred             ccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCC-CCCCCCHHHHc
Confidence            4557899999999999999999999988754332 2222111110        01100000 000010 001111     


Q ss_pred             ---HHHHHHHHHHhcccCCCCCCCHHHHHHH--HhcccCCCCCC
Q 047465           68 ---GRTTGHWTLLCAQESADDRPTVYDVVSM--LTNEATTLNPS  106 (139)
Q Consensus        68 ---~~~~~~l~~~C~~~~p~~Rps~~~v~~~--L~~~~~~~~~~  106 (139)
                         .....++..+.+..||.+|.|.++.+..  |+..+..-.+|
T Consensus       280 p~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP  323 (359)
T KOG0660|consen  280 PNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEP  323 (359)
T ss_pred             CCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCC
Confidence               1177889999999999999999998763  55555544444

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.54  E-value=1.3e-07  Score=70.98  Aligned_cols=80  Identities=20%  Similarity=0.140  Sum_probs=49.2

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ...++.++||||+||+++||++|..||.....     ..............   ...+  .......+.+++.+|+. +|
T Consensus       213 ~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~-----~~~~~~i~~~~~~~---~~~~--~~~~s~~~~~li~~ll~-~p  281 (364)
T cd05599         213 QTGYNKECDWWSLGVIMYEMLVGYPPFCSDNP-----QETYRKIINWKETL---QFPD--EVPLSPEAKDLIKRLCC-EA  281 (364)
T ss_pred             CCCCCCeeeeecchhHHHHhhcCCCCCCCCCH-----HHHHHHHHcCCCcc---CCCC--CCCCCHHHHHHHHHHcc-CH
Confidence            34578899999999999999999999853221     11111111111111   1111  11122367788888886 89


Q ss_pred             CCCCC---HHHHHH
Q 047465           84 DDRPT---VYDVVS   94 (139)
Q Consensus        84 ~~Rps---~~~v~~   94 (139)
                      .+|++   +.+++.
T Consensus       282 ~~R~~~~~~~~ll~  295 (364)
T cd05599         282 ERRLGNNGVNEIKS  295 (364)
T ss_pred             hhcCCCCCHHHHhc
Confidence            99998   887765

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.53  E-value=3.8e-07  Score=71.70  Aligned_cols=25  Identities=8%  Similarity=-0.104  Sum_probs=22.2

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           70 TTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        70 ~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      .+.++..+|++.||.+||++.+++.
T Consensus       429 ~~~~li~kmL~~DP~~Rpsa~elL~  453 (501)
T PHA03210        429 DFEYPLVKMLTFDWHLRPGAAELLA  453 (501)
T ss_pred             HHHHHHHHHhccCcccCcCHHHHhh
Confidence            5667788999999999999999986

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.51  E-value=3.9e-07  Score=69.18  Aligned_cols=73  Identities=16%  Similarity=0.210  Sum_probs=52.7

Q ss_pred             CccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCC-HHHHHHHHHHhcccCCCCC
Q 047465            8 SIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIY-GRTTGHWTLLCAQESADDR   86 (139)
Q Consensus         8 s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~-~~~~~~l~~~C~~~~p~~R   86 (139)
                      ..++||||+||+++.|++|+.||+..     ........ +..+...    +    |... ..++..+...|+..+|..|
T Consensus       201 g~~aDvWS~GViLy~ml~G~~PF~d~-----~~~~l~~k-i~~~~~~----~----p~~~~S~~~~~Li~~mL~~~P~~R  266 (370)
T KOG0583|consen  201 GKAADVWSLGVILYVLLCGRLPFDDS-----NVPNLYRK-IRKGEFK----I----PSYLLSPEARSLIEKMLVPDPSTR  266 (370)
T ss_pred             CchhhhhhhHHHHHHHHhCCCCCCCc-----cHHHHHHH-HhcCCcc----C----CCCcCCHHHHHHHHHHcCCCcccC
Confidence            58899999999999999999999742     11111111 2223221    1    3333 5588899999999999999


Q ss_pred             CCHHHHHH
Q 047465           87 PTVYDVVS   94 (139)
Q Consensus        87 ps~~~v~~   94 (139)
                      +++.+++.
T Consensus       267 ~t~~~i~~  274 (370)
T KOG0583|consen  267 ITLLEILE  274 (370)
T ss_pred             CCHHHHhh
Confidence            99999983

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=98.49  E-value=3.2e-07  Score=69.39  Aligned_cols=80  Identities=16%  Similarity=0.176  Sum_probs=48.7

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      .++.++||||+||+++||++|+.||....     ...............   .+.+  .......+..+...|+...+.+
T Consensus       223 ~~~~~~DiwSlGvilyell~G~~Pf~~~~-----~~~~~~~i~~~~~~~---~~~~--~~~~s~~~~~li~~~L~~~~~r  292 (371)
T cd05622         223 YYGRECDWWSVGVFLYEMLVGDTPFYADS-----LVGTYSKIMNHKNSL---TFPD--DNDISKEAKNLICAFLTDREVR  292 (371)
T ss_pred             cCCCccceeehhHHHHHHHhCCCCCCCCC-----HHHHHHHHHcCCCcc---cCCC--cCCCCHHHHHHHHHHcCChhhh
Confidence            37889999999999999999999985321     111111222222212   2222  2222336778888888743332


Q ss_pred             --CCCHHHHHHH
Q 047465           86 --RPTVYDVVSM   95 (139)
Q Consensus        86 --Rps~~~v~~~   95 (139)
                        |+++.+++..
T Consensus       293 ~~r~~~~ei~~h  304 (371)
T cd05622         293 LGRNGVEEIKRH  304 (371)
T ss_pred             cCCCCHHHHhcC
Confidence              6788888764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.49  E-value=3.4e-07  Score=72.86  Aligned_cols=74  Identities=15%  Similarity=0.188  Sum_probs=53.8

Q ss_pred             CccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCCC
Q 047465            8 SIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRP   87 (139)
Q Consensus         8 s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~Rp   87 (139)
                      +.++||||.||+++.+++|+.||++..  ...+...+    ..|..    ++    |.....+++++..+++..||..|-
T Consensus       190 G~~sDVWSCGVILfALLtG~LPFdDdN--ir~LLlKV----~~G~f----~M----Ps~Is~eaQdLLr~ml~VDp~~Ri  255 (786)
T KOG0588|consen  190 GRPSDVWSCGVILFALLTGKLPFDDDN--IRVLLLKV----QRGVF----EM----PSNISSEAQDLLRRMLDVDPSTRI  255 (786)
T ss_pred             CCccccchhHHHHHHHHhCCCCCCCcc--HHHHHHHH----HcCcc----cC----CCcCCHHHHHHHHHHhccCccccc
Confidence            578999999999999999999997311  22222222    22322    22    433344889999999999999999


Q ss_pred             CHHHHHHH
Q 047465           88 TVYDVVSM   95 (139)
Q Consensus        88 s~~~v~~~   95 (139)
                      ++.+|.+.
T Consensus       256 T~~eI~kH  263 (786)
T KOG0588|consen  256 TTEEILKH  263 (786)
T ss_pred             cHHHHhhC
Confidence            99999874

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=98.47  E-value=5.4e-07  Score=67.75  Aligned_cols=28  Identities=32%  Similarity=0.419  Sum_probs=25.2

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTE   31 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~   31 (139)
                      +..++.++|||||||+++||++|+.||.
T Consensus       210 ~~~~~~~~DvwSlGvil~ell~G~~Pf~  237 (363)
T cd05628         210 QTGYNKLCDWWSLGVIMYEMLIGYPPFC  237 (363)
T ss_pred             CCCCCCchhhhhhHHHHHHHHhCCCCCC
Confidence            4567889999999999999999999985

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.45  E-value=1.2e-06  Score=65.04  Aligned_cols=83  Identities=13%  Similarity=-0.001  Sum_probs=50.1

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHh------------h-----------ccchhhhhhhhcc
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVA------------N-----------SHIFLCLWLIINL   62 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~------------~-----------~~~~~~~~~~~d~   62 (139)
                      .++.++|+||+|++++++++|+.|+.....  ...........            .           ......+ .... 
T Consensus       186 ~~~~~~Di~slGv~l~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-  261 (332)
T cd07857         186 SYTKAIDVWSVGCILAELLGRKPVFKGKDY--VDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPF-ESIF-  261 (332)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCcCCCCCCH--HHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcch-HhhC-
Confidence            467889999999999999999988753221  11111000000            0           0000000 0000 


Q ss_pred             CCCCCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           63 RHGIYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        63 ~p~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                       +.. ...+.+++.+|++.+|.+||++.+++.
T Consensus       262 -~~~-~~~~~~li~~~l~~~P~~R~t~~~ll~  291 (332)
T cd07857         262 -PNA-NPLALDLLEKLLAFDPTKRISVEEALE  291 (332)
T ss_pred             -CCC-CHHHHHHHHHHccCCcccCCCHHHHhc
Confidence             111 237889999999999999999999874

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.45  E-value=4.7e-07  Score=67.63  Aligned_cols=89  Identities=15%  Similarity=-0.006  Sum_probs=50.7

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHH----------Hhhccc----hhhhhhhhc----cCCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLR----------VANSHI----FLCLWLIIN----LRHGIY   67 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~----~~~~~~~~d----~~p~~~   67 (139)
                      .++.++||||+|++++|+++|+.|+...... ..+......          ......    ...++...+    .+....
T Consensus       194 ~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (345)
T cd07877         194 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA  272 (345)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCC
Confidence            4678999999999999999999988532211 111110000          000000    000000000    000011


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047465           68 GRTTGHWTLLCAQESADDRPTVYDVVSM   95 (139)
Q Consensus        68 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~   95 (139)
                      ...+.+++..|++.+|.+||++.+++..
T Consensus       273 ~~~~~~li~~~L~~dp~~R~t~~e~l~h  300 (345)
T cd07877         273 NPLAVDLLEKMLVLDSDKRITAAQALAH  300 (345)
T ss_pred             CHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence            2367889999999999999999988753

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.44  E-value=1.1e-06  Score=65.66  Aligned_cols=88  Identities=16%  Similarity=-0.025  Sum_probs=49.6

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHH----------HHhhccch----hhhhhhhc----cCCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYL----------RVANSHIF----LCLWLIIN----LRHGIY   67 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~----~~~~~~~d----~~p~~~   67 (139)
                      .++.++|+||+|++++++++|+.|+...... ........          ..+.....    ..++....    ......
T Consensus       192 ~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (343)
T cd07880         192 HYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL-DQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNA  270 (343)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCC
Confidence            4678999999999999999999988532210 00000000          00000000    00000000    000011


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           68 GRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        68 ~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ...+.+++.+|++.+|.+||++.+++.
T Consensus       271 ~~~~~~li~~~l~~dP~~R~t~~~~l~  297 (343)
T cd07880         271 NPLAVNVLEKMLVLDAESRITAAEALA  297 (343)
T ss_pred             ChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            126778999999999999999999884

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.43  E-value=5.1e-08  Score=82.02  Aligned_cols=74  Identities=18%  Similarity=0.175  Sum_probs=51.3

Q ss_pred             ccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHH-HHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCCC
Q 047465            9 IKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYL-RVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRP   87 (139)
Q Consensus         9 ~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~Rp   87 (139)
                      .+.||||+|||++||++|++|+...+..      |.. .+...|..+   .+.    .-....-.++...|++.||++|.
T Consensus      1420 ~A~DiWslGCVVlEM~tGkrPW~~~dne------~aIMy~V~~gh~P---q~P----~~ls~~g~dFle~Cl~~dP~~Rw 1486 (1509)
T KOG4645|consen 1420 GAADIWSLGCVVLEMATGKRPWAELDNE------WAIMYHVAAGHKP---QIP----ERLSSEGRDFLEHCLEQDPKMRW 1486 (1509)
T ss_pred             cchhhhcccceEEEeecCCCchhhccch------hHHHhHHhccCCC---CCc----hhhhHhHHHHHHHHHhcCchhhh
Confidence            5789999999999999999999755432      222 222333333   332    11233667888899999999998


Q ss_pred             CHHHHHHH
Q 047465           88 TVYDVVSM   95 (139)
Q Consensus        88 s~~~v~~~   95 (139)
                      ++.+++..
T Consensus      1487 ~~~qlle~ 1494 (1509)
T KOG4645|consen 1487 TASQLLEH 1494 (1509)
T ss_pred             HHHHHHHh
Confidence            88776543

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=98.42  E-value=9.8e-08  Score=70.73  Aligned_cols=76  Identities=14%  Similarity=0.093  Sum_probs=48.5

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      .++.++||||+|++++||++|+.||.....     .. ....+..+..    .+.   .......+..++..|++.+|.+
T Consensus       173 ~~~~~~DvwslGvil~elltG~~Pf~~~~~-----~~-~~~~i~~~~~----~~~---~~~~~~~~~~li~~~L~~~P~~  239 (330)
T cd05586         173 GYTKHVDFWSLGVLVFEMCCGWSPFYAEDT-----QQ-MYRNIAFGKV----RFP---KNVLSDEGRQFVKGLLNRNPQH  239 (330)
T ss_pred             CCCCccceeccccEEEEeccCCCCCCCCCH-----HH-HHHHHHcCCC----CCC---CccCCHHHHHHHHHHcCCCHHH
Confidence            368899999999999999999999853211     11 1111111111    111   1112237788999999999999


Q ss_pred             CCC----HHHHHH
Q 047465           86 RPT----VYDVVS   94 (139)
Q Consensus        86 Rps----~~~v~~   94 (139)
                      ||+    +.+++.
T Consensus       240 R~~~~~~~~~ll~  252 (330)
T cd05586         240 RLGAHRDAVELKE  252 (330)
T ss_pred             CCCCCCCHHHHhc
Confidence            984    555543

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=98.41  E-value=2e-07  Score=70.27  Aligned_cols=81  Identities=21%  Similarity=0.197  Sum_probs=47.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+||+++||++|+.||......     .............   .+..  .......+.+++.+|+ .+|
T Consensus       218 ~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-----~~~~~i~~~~~~~---~~~~--~~~~s~~~~~li~~l~-~~p  286 (376)
T cd05598         218 RTGYTQLCDWWSVGVILYEMLVGQPPFLADTPA-----ETQLKVINWETTL---HIPS--QAKLSREASDLILRLC-CGA  286 (376)
T ss_pred             CCCCCcceeeeeccceeeehhhCCCCCCCCCHH-----HHHHHHhccCccc---cCCC--CCCCCHHHHHHHHHHh-cCH
Confidence            345778999999999999999999998643211     1111111101111   1111  1111225566666655 499


Q ss_pred             CCCC---CHHHHHHH
Q 047465           84 DDRP---TVYDVVSM   95 (139)
Q Consensus        84 ~~Rp---s~~~v~~~   95 (139)
                      .+|+   ++.+++..
T Consensus       287 ~~R~~~~t~~ell~h  301 (376)
T cd05598         287 EDRLGKNGADEIKAH  301 (376)
T ss_pred             hhcCCCCCHHHHhCC
Confidence            9999   88888754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=98.41  E-value=3e-07  Score=65.00  Aligned_cols=69  Identities=22%  Similarity=0.164  Sum_probs=45.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ++.++.++|+||+|++++|+++|+.++......           .......   .+    |......+..++..|++.||
T Consensus       156 ~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----------~~~~~~~---~~----~~~~~~~~~~li~~~l~~dp  217 (237)
T cd05576         156 ISEETEACDWWSLGAILFELLTGKTLVECHPSG-----------INTHTTL---NI----PEWVSEEARSLLQQLLQFNP  217 (237)
T ss_pred             CCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----------ccccccc---CC----cccCCHHHHHHHHHHccCCH
Confidence            345678999999999999999998765321110           0000001   11    22222367889999999999


Q ss_pred             CCCCCHH
Q 047465           84 DDRPTVY   90 (139)
Q Consensus        84 ~~Rps~~   90 (139)
                      .+|+++.
T Consensus       218 ~~R~~~~  224 (237)
T cd05576         218 TERLGAG  224 (237)
T ss_pred             HHhcCCC
Confidence            9999963

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.41  E-value=3.7e-07  Score=68.92  Aligned_cols=81  Identities=17%  Similarity=0.111  Sum_probs=48.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+||+++||++|+.||.....  .   .............   .+.+  .......+.+++..|+. +|
T Consensus       222 ~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~--~---~~~~~i~~~~~~~---~~p~--~~~~s~~~~dli~~lL~-~~  290 (377)
T cd05629         222 QQGYGQECDWWSLGAIMFECLIGWPPFCSENS--H---ETYRKIINWRETL---YFPD--DIHLSVEAEDLIRRLIT-NA  290 (377)
T ss_pred             cCCCCCceeeEecchhhhhhhcCCCCCCCCCH--H---HHHHHHHccCCcc---CCCC--CCCCCHHHHHHHHHHhc-CH
Confidence            34578899999999999999999999853221  1   1111111111111   1111  11223367788888887 66


Q ss_pred             CCC---CCHHHHHHH
Q 047465           84 DDR---PTVYDVVSM   95 (139)
Q Consensus        84 ~~R---ps~~~v~~~   95 (139)
                      .+|   +++.+++..
T Consensus       291 ~~r~~r~~~~~~l~h  305 (377)
T cd05629         291 ENRLGRGGAHEIKSH  305 (377)
T ss_pred             hhcCCCCCHHHHhcC
Confidence            665   588887764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=98.40  E-value=4.6e-07  Score=68.53  Aligned_cols=29  Identities=24%  Similarity=0.383  Sum_probs=25.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEF   32 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~   32 (139)
                      +..++.++||||+||+++||++|+.||..
T Consensus       222 ~~~~~~~~DiwSlGvil~elltG~~Pf~~  250 (382)
T cd05625         222 RTGYTQLCDWWSVGVILYEMLVGQPPFLA  250 (382)
T ss_pred             CCCCCCeeeEEechHHHHHHHhCCCCCCC
Confidence            44578899999999999999999999863

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=98.40  E-value=6.7e-07  Score=67.66  Aligned_cols=80  Identities=15%  Similarity=0.143  Sum_probs=47.8

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC-
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD-   84 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~-   84 (139)
                      .++.++|+||+|++++||++|+.||.....     ..............   .+.+  .......+..+...|+..++. 
T Consensus       223 ~~~~~~DiwSlG~ilyell~G~~Pf~~~~~-----~~~~~~i~~~~~~~---~~p~--~~~~s~~~~~li~~~L~~~~~r  292 (370)
T cd05621         223 YYGRECDWWSVGVFLFEMLVGDTPFYADSL-----VGTYSKIMDHKNSL---NFPE--DVEISKHAKNLICAFLTDREVR  292 (370)
T ss_pred             CCCcccCEEeehHHHHHHHhCCCCCCCCCH-----HHHHHHHHhCCccc---CCCC--cccCCHHHHHHHHHHccCchhc
Confidence            377899999999999999999999853211     11111222211111   1111  111222566777778865443 


Q ss_pred             -CCCCHHHHHHH
Q 047465           85 -DRPTVYDVVSM   95 (139)
Q Consensus        85 -~Rps~~~v~~~   95 (139)
                       .|+++.+++..
T Consensus       293 ~~R~~~~e~l~h  304 (370)
T cd05621         293 LGRNGVEEIKQH  304 (370)
T ss_pred             cCCCCHHHHhcC
Confidence             38899988764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=98.36  E-value=9.2e-08  Score=72.27  Aligned_cols=75  Identities=19%  Similarity=0.182  Sum_probs=52.6

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhh----hhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLC----LWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++|+||+||+++-+++|-.||...... ..+.    ..+..|...+    |.++.+        +..++..+.+..|
T Consensus       358 ~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~-~sl~----eQI~~G~y~f~p~~w~~Ise--------ea~dlI~~mL~Vd  424 (475)
T KOG0615|consen  358 YPSKVDIWSLGCVLFVCLSGYPPFSEEYTD-PSLK----EQILKGRYAFGPLQWDRISE--------EALDLINWMLVVD  424 (475)
T ss_pred             ccchheeeeccceEEEEeccCCCcccccCC-ccHH----HHHhcCcccccChhhhhhhH--------HHHHHHHHhhEeC
Confidence            345899999999999999999999654442 2112    2223333221    002222        7888999999999


Q ss_pred             CCCCCCHHHHHH
Q 047465           83 ADDRPTVYDVVS   94 (139)
Q Consensus        83 p~~Rps~~~v~~   94 (139)
                      |++||++.+++.
T Consensus       425 P~~R~s~~eaL~  436 (475)
T KOG0615|consen  425 PENRPSADEALN  436 (475)
T ss_pred             cccCcCHHHHhc
Confidence            999999999875

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=98.33  E-value=1.9e-06  Score=68.75  Aligned_cols=81  Identities=9%  Similarity=0.115  Sum_probs=45.6

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhcc-chhhhhhhhccCCCC-------------CHHHH
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSH-IFLCLWLIINLRHGI-------------YGRTT   71 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~p~~-------------~~~~~   71 (139)
                      .+..++||||+||+++||+++..+.+.      ....+.......+ ....|.....  +..             .....
T Consensus       355 ~~~~k~DVwSlGviL~el~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~~~~~  426 (566)
T PLN03225        355 NLPDRFDIYSAGLIFLQMAFPNLRSDS------NLIQFNRQLKRNDYDLVAWRKLVE--PRASPDLRRGFEVLDLDGGAG  426 (566)
T ss_pred             cCCCCcccHHHHHHHHHHHhCcCCCch------HHHHHHHHHHhcCCcHHHHHHhhc--cccchhhhhhhhhccccchHH
Confidence            355678999999999999987655421      1111110000000 0000001111  110             01134


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHH
Q 047465           72 GHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        72 ~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      .+++..|++.||.+||++.++++
T Consensus       427 ~dLi~~mL~~dP~kR~ta~e~L~  449 (566)
T PLN03225        427 WELLKSMMRFKGRQRISAKAALA  449 (566)
T ss_pred             HHHHHHHccCCcccCCCHHHHhC
Confidence            57999999999999999999976

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=98.27  E-value=7.3e-07  Score=66.93  Aligned_cols=29  Identities=31%  Similarity=0.372  Sum_probs=25.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEF   32 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~   32 (139)
                      +..++.++|+||+||+++||++|+.||..
T Consensus       210 ~~~~~~~~DiwSlGvilyel~tG~~Pf~~  238 (360)
T cd05627         210 QTGYNKLCDWWSLGVIMYEMLIGYPPFCS  238 (360)
T ss_pred             CCCCCCcceeccccceeeecccCCCCCCC
Confidence            44578899999999999999999999853

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.23  E-value=2e-06  Score=67.26  Aligned_cols=79  Identities=15%  Similarity=0.172  Sum_probs=54.7

Q ss_pred             CccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCCC
Q 047465            8 SIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRP   87 (139)
Q Consensus         8 s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~Rp   87 (139)
                      ..++||||+|+++|.+++|+.||..... ..-    ....+......         |..-..++.++...++..+|++|.
T Consensus       197 APAVDiWSLGVILyMLVCGq~PFqeAND-SET----LTmImDCKYtv---------PshvS~eCrdLI~sMLvRdPkkRA  262 (864)
T KOG4717|consen  197 APAVDIWSLGVILYMLVCGQPPFQEAND-SET----LTMIMDCKYTV---------PSHVSKECRDLIQSMLVRDPKKRA  262 (864)
T ss_pred             CcchhhhHHHHHHHHHHhCCCccccccc-hhh----hhhhhcccccC---------chhhhHHHHHHHHHHHhcCchhhc
Confidence            4789999999999999999999964322 111    11222222211         444444888999999999999999


Q ss_pred             CHHHHHH--HHhccc
Q 047465           88 TVYDVVS--MLTNEA  100 (139)
Q Consensus        88 s~~~v~~--~L~~~~  100 (139)
                      +.++++.  ||+..-
T Consensus       263 slEeI~s~~Wlq~~D  277 (864)
T KOG4717|consen  263 SLEEIVSTSWLQAGD  277 (864)
T ss_pred             cHHHHhccccccCCC
Confidence            9999874  555443

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=98.23  E-value=2.1e-06  Score=63.77  Aligned_cols=82  Identities=17%  Similarity=0.099  Sum_probs=46.7

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc--C
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE--S   82 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~--~   82 (139)
                      +.++.++||||||+++|||++|+.||....     ...............   .+.. ........+.+++.+|+..  +
T Consensus       183 ~~~~~~~DvwSlGvil~ell~g~~Pf~~~~-----~~~~~~~i~~~~~~~---~~p~-~~~~~s~~~~~li~~ll~~~~~  253 (332)
T cd05623         183 GKYGPECDWWSLGVCMYEMLYGETPFYAES-----LVETYGKIMNHKERF---QFPA-QVTDVSEDAKDLIRRLICSREH  253 (332)
T ss_pred             CCCCCcCCEEeeHHHHHHHhcCCCCCCCCC-----HHHHHHHHhCCCccc---cCCC-ccccCCHHHHHHHHHHccChhh
Confidence            357889999999999999999999985321     111121222111111   1110 0111223667777776644  3


Q ss_pred             CCCCCCHHHHHHH
Q 047465           83 ADDRPTVYDVVSM   95 (139)
Q Consensus        83 p~~Rps~~~v~~~   95 (139)
                      +..|+++.+++..
T Consensus       254 r~~r~~~~~~~~h  266 (332)
T cd05623         254 RLGQNGIEDFKQH  266 (332)
T ss_pred             hcCCCCHHHHhCC
Confidence            3446788888754

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=98.23  E-value=3.2e-06  Score=62.82  Aligned_cols=82  Identities=20%  Similarity=0.128  Sum_probs=45.7

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhc--ccC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCA--QES   82 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~--~~~   82 (139)
                      +.++.++||||+|+++|||++|+.||....     ...............   .+... .......+..++.+|+  ..+
T Consensus       183 ~~~~~~~DiwslG~~l~el~~g~~Pf~~~~-----~~~~~~~i~~~~~~~---~~~~~-~~~~~~~~~~li~~ll~~~~~  253 (331)
T cd05597         183 GRYGPECDWWSLGVCMYEMLYGETPFYAES-----LVETYGKIMNHKEHF---QFPPD-VTDVSEEAKDLIRRLICSPET  253 (331)
T ss_pred             cCCCCcceeehhhhHHHHHhhCCCCCCCCC-----HHHHHHHHHcCCCcc---cCCCc-cCCCCHHHHHHHHHHccCccc
Confidence            346789999999999999999999985321     111111111111111   11110 1111225666776655  444


Q ss_pred             CCCCCCHHHHHHH
Q 047465           83 ADDRPTVYDVVSM   95 (139)
Q Consensus        83 p~~Rps~~~v~~~   95 (139)
                      +..|+++.+++..
T Consensus       254 r~~r~~~~~~l~h  266 (331)
T cd05597         254 RLGRNGLQDFKDH  266 (331)
T ss_pred             ccCCCCHHHHhcC
Confidence            4447888888764

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=98.22  E-value=6.7e-07  Score=64.60  Aligned_cols=78  Identities=19%  Similarity=0.248  Sum_probs=53.0

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCC---CHHHHHHHHHHhcccCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGI---YGRTTGHWTLLCAQESA   83 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~---~~~~~~~l~~~C~~~~p   83 (139)
                      |..++||||+|+.++|+.+|+-|+..    .....+.+.+.. .+..+   .+..  +..   ....+..+...|+.++-
T Consensus       246 yDiRSDvWSLGITL~EvAtG~fPyr~----w~svfeql~~Vv-~gdpp---~l~~--~~~~~~~s~~~~~fintCl~Kd~  315 (361)
T KOG1006|consen  246 YDIRSDVWSLGITLYEVATGNFPYRK----WDSVFEQLCQVV-IGDPP---ILLF--DKECVHYSFSMVRFINTCLIKDR  315 (361)
T ss_pred             cchhhhhhhhcceEeeeecCCCCcch----HHHHHHHHHHHH-cCCCC---eecC--cccccccCHHHHHHHHHHhhccc
Confidence            77899999999999999999998742    222333333322 22222   2221  111   12278889999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      ..||++.++..
T Consensus       316 ~~Rpky~~Lk~  326 (361)
T KOG1006|consen  316 SDRPKYDDLKK  326 (361)
T ss_pred             ccCcchhhhhc
Confidence            99999998764

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.21  E-value=5.2e-07  Score=68.86  Aligned_cols=83  Identities=17%  Similarity=0.139  Sum_probs=52.9

Q ss_pred             ccchhhhHhHHHHHHHhCC----------CCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHH--------H
Q 047465            9 IKSDIFSLGVLMLEILSGK----------KNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGR--------T   70 (139)
Q Consensus         9 ~k~Dv~s~G~~l~ei~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~--------~   70 (139)
                      ..+||||||.++||+.-+.          .||-+..+..+. .+.+...+...+         .||.+...        .
T Consensus       405 k~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs-~eeMrkVVCv~~---------~RP~ipnrW~s~~~l~~  474 (513)
T KOG2052|consen  405 KRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPS-FEEMRKVVCVQK---------LRPNIPNRWKSDPALRV  474 (513)
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCC-HHHHhcceeecc---------cCCCCCcccccCHHHHH
Confidence            4689999999999998643          233211111111 111222221111         33444433        7


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHhcccC
Q 047465           71 TGHWTLLCAQESADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        71 ~~~l~~~C~~~~p~~Rps~~~v~~~L~~~~~  101 (139)
                      +.++|..||..||..|-++-.+.+.|.++.+
T Consensus       475 m~klMkeCW~~Np~aRltALriKKtl~~l~~  505 (513)
T KOG2052|consen  475 MAKLMKECWYANPAARLTALRIKKTLAKLSN  505 (513)
T ss_pred             HHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence            8899999999999999999988888887765

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=98.14  E-value=6.1e-06  Score=65.15  Aligned_cols=78  Identities=14%  Similarity=0.130  Sum_probs=56.7

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .++.|+..+|.||+||++||+..|+.||-     ...+...+.....+....         |......+..+....+.+|
T Consensus       173 ~e~pyd~~sDlWslGcilYE~~~G~PPF~-----a~si~~Lv~~I~~d~v~~---------p~~~S~~f~nfl~gLL~kd  238 (808)
T KOG0597|consen  173 EEQPYDHTSDLWSLGCILYELYVGQPPFY-----ARSITQLVKSILKDPVKP---------PSTASSSFVNFLQGLLIKD  238 (808)
T ss_pred             cCCCccchhhHHHHHHHHHHHhcCCCCch-----HHHHHHHHHHHhcCCCCC---------cccccHHHHHHHHHHhhcC
Confidence            45678999999999999999999999983     223333343333333322         3333347888889999999


Q ss_pred             CCCCCCHHHHHH
Q 047465           83 ADDRPTVYDVVS   94 (139)
Q Consensus        83 p~~Rps~~~v~~   94 (139)
                      |..|-+-.+++.
T Consensus       239 P~~RltW~~Ll~  250 (808)
T KOG0597|consen  239 PAQRLTWTDLLG  250 (808)
T ss_pred             hhhcccHHHHhc
Confidence            999999888875

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=98.14  E-value=9.7e-06  Score=59.04  Aligned_cols=78  Identities=17%  Similarity=0.121  Sum_probs=52.7

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhh-hhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLC-LWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      -|+..+|+|+.|++|+.++.|..||=   ...   ...+.+.+.+|...+ -++|-|     ...++.++..+|++.||.
T Consensus       204 GYs~EVD~Wa~GVImyTLLaGcpPFw---HRk---QmlMLR~ImeGkyqF~speWad-----is~~~KdLIsrlLqVdp~  272 (411)
T KOG0599|consen  204 GYSKEVDEWACGVIMYTLLAGCPPFW---HRK---QMLMLRMIMEGKYQFRSPEWAD-----ISATVKDLISRLLQVDPT  272 (411)
T ss_pred             CccchhhHHHHHHHHHHHHcCCCchh---HHH---HHHHHHHHHhcccccCCcchhh-----ccccHHHHHHHHHeeCch
Confidence            47888999999999999999999872   111   111223334443310 002222     111778899999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +|-+.+++++
T Consensus       273 ~Ritake~La  282 (411)
T KOG0599|consen  273 KRITAKEALA  282 (411)
T ss_pred             hcccHHHHhc
Confidence            9999999875

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.14  E-value=6e-06  Score=65.87  Aligned_cols=74  Identities=15%  Similarity=0.080  Sum_probs=53.9

Q ss_pred             CCCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            2 ALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         2 ~~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      +.+..|+..+|=|||||++|||+.|..||+..++  ..+.+.+   .....       .-  |.-...+...++.+.+..
T Consensus       540 l~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddE--ee~FdsI---~~d~~-------~y--P~~ls~ea~~il~~ll~k  605 (694)
T KOG0694|consen  540 LTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDE--EEVFDSI---VNDEV-------RY--PRFLSKEAIAIMRRLLRK  605 (694)
T ss_pred             hccCcccchhhHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHH---hcCCC-------CC--CCcccHHHHHHHHHHhcc
Confidence            3567899999999999999999999999974433  1222211   12221       11  666666889999999999


Q ss_pred             CCCCCCCH
Q 047465           82 SADDRPTV   89 (139)
Q Consensus        82 ~p~~Rps~   89 (139)
                      +|.+|--.
T Consensus       606 ~p~kRLG~  613 (694)
T KOG0694|consen  606 NPEKRLGS  613 (694)
T ss_pred             CcccccCC
Confidence            99999765

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=98.13  E-value=9.5e-06  Score=58.57  Aligned_cols=89  Identities=8%  Similarity=-0.007  Sum_probs=54.6

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHh---hccchhhhhhhhc---cC--CCCC--------H
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVA---NSHIFLCLWLIIN---LR--HGIY--------G   68 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~d---~~--p~~~--------~   68 (139)
                      ..|+..+|+||.||++.|++-|..-++...  ..+-...+...+   ....++.+..+.|   .+  |...        +
T Consensus       177 r~Yg~~VDmWavGCI~AELllr~P~fpG~s--DidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas  254 (318)
T KOG0659|consen  177 RQYGTGVDMWAVGCIFAELLLRVPFFPGDS--DIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAAS  254 (318)
T ss_pred             hhcCCcchhhhHHHHHHHHHccCCCCCCCc--hHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCcccccccccc
Confidence            468899999999999999998876554321  222222232322   2222221112211   00  1100        1


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047465           69 RTTGHWTLLCAQESADDRPTVYDVVSM   95 (139)
Q Consensus        69 ~~~~~l~~~C~~~~p~~Rps~~~v~~~   95 (139)
                      ....+++...+..||.+|.++.+.+++
T Consensus       255 ~d~ldLl~~m~~ynP~~Rita~qaL~~  281 (318)
T KOG0659|consen  255 SDALDLLSKMLTYNPKKRITASQALKH  281 (318)
T ss_pred             HHHHHHHHhhhccCchhcccHHHHhcc
Confidence            177999999999999999999988754

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.12  E-value=3e-06  Score=67.22  Aligned_cols=79  Identities=19%  Similarity=0.262  Sum_probs=51.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      .|.|+-|+||||+||.+.|+..++.|.-     .++.... ..++.+...+    ++.  .......+..++-.|+++-|
T Consensus       199 EGqYdgkvDvWSLGITCIELAERkPPlF-----nMNAMSA-LYHIAQNesP----tLq--s~eWS~~F~~Fvd~CLqKip  266 (948)
T KOG0577|consen  199 EGQYDGKVDVWSLGITCIELAERKPPLF-----NMNAMSA-LYHIAQNESP----TLQ--SNEWSDYFRNFVDSCLQKIP  266 (948)
T ss_pred             ccccCCccceeeccchhhhhhhcCCCcc-----CchHHHH-HHHHHhcCCC----CCC--CchhHHHHHHHHHHHHhhCc
Confidence            5789999999999999999988887752     2222221 1222222221    111  11112277888899999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||+..+++.
T Consensus       267 qeRptse~ll~  277 (948)
T KOG0577|consen  267 QERPTSEELLK  277 (948)
T ss_pred             ccCCcHHHHhh
Confidence            99999887764

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=98.11  E-value=1.2e-05  Score=60.95  Aligned_cols=81  Identities=15%  Similarity=0.260  Sum_probs=51.3

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccc-hhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHI-FLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      ..++|+.|+|+||.|+++|++++|+.||...-  ...+..++    +.+. ..   ..+   +........++...-++.
T Consensus       187 ~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t--~~eL~~~~----~k~~~~~---~~~---~~~~s~~~~~Ll~~ll~~  254 (429)
T KOG0595|consen  187 MSQQYDAKADLWSIGTILYQCLTGKPPFDAET--PKELLLYI----KKGNEIV---PVL---PAELSNPLRELLISLLQR  254 (429)
T ss_pred             HhccccchhhHHHHHHHHHHHHhCCCCccccC--HHHHHHHH----hcccccc---Cch---hhhccCchhhhhhHHHhc
Confidence            46789999999999999999999999986322  22233222    1121 11   111   111222455677777788


Q ss_pred             CCCCCCCHHHHHHH
Q 047465           82 SADDRPTVYDVVSM   95 (139)
Q Consensus        82 ~p~~Rps~~~v~~~   95 (139)
                      ++.+|-++.+....
T Consensus       255 ~~~~~~~~~~~~~~  268 (429)
T KOG0595|consen  255 NPKDRISFEDFFDH  268 (429)
T ss_pred             CccccCchHHhhhh
Confidence            88889887766543

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.11  E-value=1.7e-05  Score=56.51  Aligned_cols=77  Identities=16%  Similarity=0.051  Sum_probs=55.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +...+..+|+|++|++++|++.|..||....      .+.....+..   .   ++..  |..-...+.++...|+..+|
T Consensus       196 ~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~------~~etYkrI~k---~---~~~~--p~~is~~a~dlI~~ll~~~p  261 (281)
T KOG0580|consen  196 GRGHDKFVDLWSLGVLCYEFLVGLPPFESQS------HSETYKRIRK---V---DLKF--PSTISGGAADLISRLLVKNP  261 (281)
T ss_pred             CCCccchhhHHHHHHHHHHHHhcCCchhhhh------hHHHHHHHHH---c---cccC--CcccChhHHHHHHHHhccCc
Confidence            4457789999999999999999999995321      2222222211   1   2333  54444488999999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+|....+++.
T Consensus       262 ~~r~~l~~v~~  272 (281)
T KOG0580|consen  262 IERLALTEVMD  272 (281)
T ss_pred             cccccHHHHhh
Confidence            99999998875

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=98.06  E-value=5.5e-06  Score=65.50  Aligned_cols=31  Identities=23%  Similarity=0.358  Sum_probs=27.1

Q ss_pred             CCCCCCCccchhhhHhHHHHHHHhCCCCCCc
Q 047465            2 ALEGVFSIKSDIFSLGVLMLEILSGKKNTEF   32 (139)
Q Consensus         2 ~~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~   32 (139)
                      +.|..|+.+.|||||||++.||++|...|+.
T Consensus       360 ILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG  390 (586)
T KOG0667|consen  360 ILGLPYDTAIDMWSLGCILAELFTGEPLFPG  390 (586)
T ss_pred             hccCCCCCccceeehhhhHHhHhcCccccCC
Confidence            5678899999999999999999999766653

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=98.05  E-value=6e-06  Score=61.36  Aligned_cols=81  Identities=17%  Similarity=0.099  Sum_probs=45.5

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +.++.++|+||+|+++|||++|+.||.....     ..............   .+... .......+.+++.+|+...++
T Consensus       183 ~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~-----~~~~~~i~~~~~~~---~~p~~-~~~~~~~~~~li~~ll~~~~~  253 (331)
T cd05624         183 GKYGPECDWWSLGVCMYEMLYGETPFYAESL-----VETYGKIMNHEERF---QFPSH-ITDVSEEAKDLIQRLICSRER  253 (331)
T ss_pred             CCCCCcccEEeeehhhhhhhhCCCCccCCCH-----HHHHHHHHcCCCcc---cCCCc-cccCCHHHHHHHHHHccCchh
Confidence            4577899999999999999999999853211     11111111111111   11000 000122677788887775443


Q ss_pred             C--CCCHHHHHH
Q 047465           85 D--RPTVYDVVS   94 (139)
Q Consensus        85 ~--Rps~~~v~~   94 (139)
                      .  |+++.+++.
T Consensus       254 ~~~~~~~~~~~~  265 (331)
T cd05624         254 RLGQNGIEDFKK  265 (331)
T ss_pred             hcCCCCHHHHhc
Confidence            3  457777764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=98.01  E-value=8.4e-06  Score=60.77  Aligned_cols=72  Identities=19%  Similarity=0.164  Sum_probs=49.2

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .+.-++..+|-||+|++++||++|..||..     .+....... +..+...   ..    |........++....++.+
T Consensus       198 ~~~gy~~~vDWWsLGillYeML~G~pPF~~-----~~~~~~~~~-I~~~k~~---~~----p~~ls~~ardll~~LL~rd  264 (357)
T KOG0598|consen  198 LGKGYDKAVDWWSLGILLYEMLTGKPPFYA-----EDVKKMYDK-ILKGKLP---LP----PGYLSEEARDLLKKLLKRD  264 (357)
T ss_pred             hcCCCCcccchHhHHHHHHHHhhCCCCCcC-----ccHHHHHHH-HhcCcCC---CC----CccCCHHHHHHHHHHhccC
Confidence            345688999999999999999999999852     222222322 2223322   10    3333447888999999999


Q ss_pred             CCCCC
Q 047465           83 ADDRP   87 (139)
Q Consensus        83 p~~Rp   87 (139)
                      |++|-
T Consensus       265 p~~RL  269 (357)
T KOG0598|consen  265 PRQRL  269 (357)
T ss_pred             HHHhc
Confidence            99994

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.93  E-value=1.3e-05  Score=62.21  Aligned_cols=88  Identities=11%  Similarity=0.074  Sum_probs=53.0

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcC-chHHHHHHHHHhhccchhhhhhhhc---cCCCCC------------HH
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTD-SLIFVIYYLRVANSHIFLCLWLIIN---LRHGIY------------GR   69 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d---~~p~~~------------~~   69 (139)
                      .|+.++|+||.||++.||+.|+..+....+. +++.+...+....+..+. ...+..   .+|...            ..
T Consensus       296 ~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~-~~kLP~~~~~kp~~~y~r~l~E~~~~~~~  374 (560)
T KOG0600|consen  296 SYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWP-VSKLPHATIFKPQQPYKRRLRETFKDFPA  374 (560)
T ss_pred             ccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccc-cccCCcccccCCCCcccchHHHHhccCCH
Confidence            6899999999999999999999887643321 222222222111111111 001100   001111            11


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           70 TTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        70 ~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ...+++...+..||++|.++.+++.
T Consensus       375 ~~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  375 SALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             HHHHHHHHHhccCccccccHHHHhc
Confidence            6788888999999999999988764

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=97.91  E-value=2.3e-06  Score=63.02  Aligned_cols=78  Identities=14%  Similarity=0.204  Sum_probs=52.7

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDR   86 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~R   86 (139)
                      |..++||||+|+...||..|+.|+.+..+.      .+...+.....+   .+-.  |......+-++...|+-.+|++|
T Consensus       206 Y~~~ADIWSLGITaIEMAEG~PPYsDIHPM------RAIFMIPT~PPP---TF~K--PE~WS~~F~DFi~~CLiK~PE~R  274 (502)
T KOG0574|consen  206 YDTKADIWSLGITAIEMAEGRPPYSDIHPM------RAIFMIPTKPPP---TFKK--PEEWSSEFNDFIRSCLIKKPEER  274 (502)
T ss_pred             cchhhhHhhhcchhhhhhcCCCCccccccc------ceeEeccCCCCC---CCCC--hHhhhhHHHHHHHHHhcCCHHHH
Confidence            678999999999999999999998644321      111111111111   1111  33344488999999999999999


Q ss_pred             CCHHHHHHH
Q 047465           87 PTVYDVVSM   95 (139)
Q Consensus        87 ps~~~v~~~   95 (139)
                      -++.++++.
T Consensus       275 ~TA~~L~~H  283 (502)
T KOG0574|consen  275 KTALRLCEH  283 (502)
T ss_pred             HHHHHHhhh
Confidence            998877653

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=97.91  E-value=2.5e-05  Score=60.45  Aligned_cols=78  Identities=15%  Similarity=0.114  Sum_probs=51.3

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDR   86 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~R   86 (139)
                      -+.+.||||+||.+|.++.|+.||...     ..........+....     +.. .|.+ ...+.++..+.+.+||..|
T Consensus       296 ~g~a~DiWalGVTLYCllfG~~PF~~~-----~~~~l~~KIvn~pL~-----fP~-~pe~-~e~~kDli~~lL~KdP~~R  363 (576)
T KOG0585|consen  296 SGFALDIWALGVTLYCLLFGQLPFFDD-----FELELFDKIVNDPLE-----FPE-NPEI-NEDLKDLIKRLLEKDPEQR  363 (576)
T ss_pred             cchhhhhhhhhhhHHHhhhccCCcccc-----hHHHHHHHHhcCccc-----CCC-cccc-cHHHHHHHHHHhhcChhhe
Confidence            357789999999999999999998521     111222222322221     111 0212 2267889999999999999


Q ss_pred             CCHHHHHHHH
Q 047465           87 PTVYDVVSML   96 (139)
Q Consensus        87 ps~~~v~~~L   96 (139)
                      .++.+|....
T Consensus       364 i~l~~ik~Hp  373 (576)
T KOG0585|consen  364 ITLPDIKLHP  373 (576)
T ss_pred             eehhhheecc
Confidence            9999886543

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=97.91  E-value=1.2e-05  Score=67.84  Aligned_cols=77  Identities=14%  Similarity=0.122  Sum_probs=48.3

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      .|+.|+|+||+||++.||+..   |....+    -.. +...+..+..++-..+.+  +...  .-..+..+.++.||.+
T Consensus       794 ~Yn~KiDmYSLGIVlFEM~yP---F~TsME----Ra~-iL~~LR~g~iP~~~~f~~--~~~~--~e~slI~~Ll~hdP~k  861 (1351)
T KOG1035|consen  794 KYNSKIDMYSLGIVLFEMLYP---FGTSME----RAS-ILTNLRKGSIPEPADFFD--PEHP--EEASLIRWLLSHDPSK  861 (1351)
T ss_pred             cccchhhhHHHHHHHHHHhcc---CCchHH----HHH-HHHhcccCCCCCCccccc--ccch--HHHHHHHHHhcCCCcc
Confidence            689999999999999999865   433222    111 112233333331002233  3333  4456777888999999


Q ss_pred             CCCHHHHHH
Q 047465           86 RPTVYDVVS   94 (139)
Q Consensus        86 Rps~~~v~~   94 (139)
                      ||++.+++.
T Consensus       862 RPtA~eLL~  870 (1351)
T KOG1035|consen  862 RPTATELLN  870 (1351)
T ss_pred             CCCHHHHhh
Confidence            999998864

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=97.90  E-value=3.3e-05  Score=55.52  Aligned_cols=80  Identities=13%  Similarity=0.040  Sum_probs=52.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhh-hhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLW-LIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ...|+..+|||+.|++++-++.|..||-.-  ....    ....+..+....-+ .+    +.+.+ ....+..+++..|
T Consensus       186 kdpy~kpvDiW~cGViLfiLL~G~~PF~~~--~~~r----lye~I~~g~yd~~~~~w----~~is~-~Ak~LvrrML~~d  254 (355)
T KOG0033|consen  186 KDPYSKPVDIWACGVILYILLVGYPPFWDE--DQHR----LYEQIKAGAYDYPSPEW----DTVTP-EAKSLIRRMLTVN  254 (355)
T ss_pred             cCCCCCcchhhhhhHHHHHHHhCCCCCCCc--cHHH----HHHHHhccccCCCCccc----CcCCH-HHHHHHHHHhccC
Confidence            446888999999999999999999998421  1111    22222222211000 11    12222 7788999999999


Q ss_pred             CCCCCCHHHHHH
Q 047465           83 ADDRPTVYDVVS   94 (139)
Q Consensus        83 p~~Rps~~~v~~   94 (139)
                      |.+|.++.|.+.
T Consensus       255 P~kRIta~EAL~  266 (355)
T KOG0033|consen  255 PKKRITADEALK  266 (355)
T ss_pred             hhhhccHHHHhC
Confidence            999999988763

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=97.90  E-value=1.8e-05  Score=60.37  Aligned_cols=81  Identities=16%  Similarity=0.076  Sum_probs=53.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..|+..+||||.|++++.|++|..||..... ...+.     .+..+...+-.+..   +.+ ...+.++...++..+|
T Consensus       212 ~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~-~~~~~-----~i~~~~~~f~~~~w---~~i-s~~akd~i~~ll~~dp  281 (382)
T KOG0032|consen  212 GRPYGDEVDVWSIGVILYILLSGVPPFWGETE-FEIFL-----AILRGDFDFTSEPW---DDI-SESAKDFIRKLLEFDP  281 (382)
T ss_pred             CCCCCcccchhHHHHHHHHHhhCCCCCcCCCh-hHHHH-----HHHcCCCCCCCCCc---ccc-CHHHHHHHHHhcccCc
Confidence            35789999999999999999999999853221 11111     11112111000111   111 2278889999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      ..|+++.++++
T Consensus       282 ~~R~ta~~~L~  292 (382)
T KOG0032|consen  282 RKRLTAAQALQ  292 (382)
T ss_pred             ccCCCHHHHhc
Confidence            99999999987

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=97.90  E-value=7.8e-06  Score=63.07  Aligned_cols=79  Identities=16%  Similarity=0.180  Sum_probs=48.3

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      +.+.|+||||+||+++.+++|++||...... ..++..- ..+. ....   .+. ..|.+. ....++..+|++..-.+
T Consensus       660 KIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ-QdILqeN-TIlk-AtEV---qFP-~KPvVs-seAkaFIRRCLaYRKeD  731 (775)
T KOG1151|consen  660 KISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ-QDILQEN-TILK-ATEV---QFP-PKPVVS-SEAKAFIRRCLAYRKED  731 (775)
T ss_pred             ccccceeeEeeehhhhhhhccCCCCCCchhH-HHHHhhh-chhc-ceec---cCC-CCCccC-HHHHHHHHHHHHhhhhh
Confidence            5689999999999999999999999644331 1111110 0111 1111   111 113333 27788999999998888


Q ss_pred             CCCHHHH
Q 047465           86 RPTVYDV   92 (139)
Q Consensus        86 Rps~~~v   92 (139)
                      |...-++
T Consensus       732 R~DV~qL  738 (775)
T KOG1151|consen  732 RIDVQQL  738 (775)
T ss_pred             hhhHHHH
Confidence            8654443

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=97.87  E-value=2.6e-05  Score=57.82  Aligned_cols=85  Identities=12%  Similarity=0.063  Sum_probs=52.9

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhh---ccchhhhhhhh---ccC--------CCCCH---
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVAN---SHIFLCLWLII---NLR--------HGIYG---   68 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~---d~~--------p~~~~---   68 (139)
                      .|+...||||+||++.||++++..|+....  ......+...+.   +..++   .+.   +.+        +....   
T Consensus       197 ~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se--~~ql~~If~~lGtP~e~~Wp---~v~~~~~~k~~f~~~~~~~~l~~~~  271 (323)
T KOG0594|consen  197 SYSTSVDIWSLGCIFAEMFTRRPLFPGDSE--IDQLFRIFRLLGTPNEKDWP---GVSSLPDYKAPFPKWPGPKDLSSIL  271 (323)
T ss_pred             cCCCCcchHhHHHHHHHHHhCCCCCCCCcH--HHHHHHHHHHcCCCCccCCC---CccccccccccCcCCCCccchHHhc
Confidence            689999999999999999998887764322  111222222221   11221   221   100        11110   


Q ss_pred             ----HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047465           69 ----RTTGHWTLLCAQESADDRPTVYDVVSM   95 (139)
Q Consensus        69 ----~~~~~l~~~C~~~~p~~Rps~~~v~~~   95 (139)
                          ....++...+++.+|.+|.++...+.+
T Consensus       272 ~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  272 PKLDPDGIELLSKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             cccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence                167788999999999999999877654

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=97.86  E-value=5e-05  Score=56.73  Aligned_cols=89  Identities=16%  Similarity=0.056  Sum_probs=54.0

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHH----------hhccch-hhhhhhhc---cC--CCCCH
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRV----------ANSHIF-LCLWLIIN---LR--HGIYG   68 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~-~~~~~~~d---~~--p~~~~   68 (139)
                      ..|+.+.||||.||++.||+.|+..|+.-.. ...+...+.-.          ++.... ...+.+..   .+  ....+
T Consensus       201 ~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~-~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~  279 (364)
T KOG0658|consen  201 TEYTTSIDIWSAGCVMAELLKGQPLFPGDSS-VDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLP  279 (364)
T ss_pred             cccCceeEEhhhhHHHHHHhcCCcccCCCCH-HHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCC
Confidence            3689999999999999999999988875322 22333322111          100000 00001110   00  01112


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           69 RTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        69 ~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      .+..+++.++++.+|.+|-+..+++.
T Consensus       280 ~d~~dll~~~L~Y~P~~R~~~~~~l~  305 (364)
T KOG0658|consen  280 PDALDLLSKLLQYSPSKRLSALEALA  305 (364)
T ss_pred             HHHHHHHHHHhccChhhcCCHHHHhc
Confidence            28899999999999999999888875

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=97.85  E-value=4.3e-05  Score=56.93  Aligned_cols=88  Identities=11%  Similarity=-0.052  Sum_probs=52.5

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhc-------cCCCC-----------
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIIN-------LRHGI-----------   66 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-------~~p~~-----------   66 (139)
                      ..|++..|+||+||++.|++.++..|+...  ..+-++.+...+.......|+.+..       +.+..           
T Consensus       253 ~tyst~iDMWSvGCI~aE~l~~kPlf~G~s--E~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~  330 (419)
T KOG0663|consen  253 KTYSTAVDMWSVGCIFAELLTQKPLFPGKS--EIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGA  330 (419)
T ss_pred             cccCcchhhhhHHHHHHHHHhcCCCCCCCc--hHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccc
Confidence            368999999999999999999998775422  2222222222221111110111111       00000           


Q ss_pred             --CHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           67 --YGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        67 --~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                        ....-+.++...+..||++|-++++.+.
T Consensus       331 ~~lse~g~~Lln~llt~dP~kR~tA~~~L~  360 (419)
T KOG0663|consen  331 LSLSEQGFDLLNKLLTYDPGKRITAEDGLK  360 (419)
T ss_pred             cccchhHHHHHHHHhccCccccccHHHhhc
Confidence              0115567888999999999999998764

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.80  E-value=5.3e-05  Score=58.86  Aligned_cols=97  Identities=16%  Similarity=0.109  Sum_probs=57.9

Q ss_pred             CCCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcC----chHHHHHHHHH--------hhcc-chhhhhhhhc-------
Q 047465            2 ALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTD----SLIFVIYYLRV--------ANSH-IFLCLWLIIN-------   61 (139)
Q Consensus         2 ~~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~----~~~~~~~~~~~--------~~~~-~~~~~~~~~d-------   61 (139)
                      +.+..|+..+|||||+|+++|++||--.|+.....    ....+..+...        ...| ...   ++++       
T Consensus       423 llGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SR---dFFnr~G~Lrh  499 (590)
T KOG1290|consen  423 LLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSR---DFFNRRGELRH  499 (590)
T ss_pred             eecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchH---hhhccccceec
Confidence            45678999999999999999999997766432221    22222222111        1111 111   2222       


Q ss_pred             ---cCCCCCHH--------------HHHHHHHHhcccCCCCCCCHHHHHH--HHhcccC
Q 047465           62 ---LRHGIYGR--------------TTGHWTLLCAQESADDRPTVYDVVS--MLTNEAT  101 (139)
Q Consensus        62 ---~~p~~~~~--------------~~~~l~~~C~~~~p~~Rps~~~v~~--~L~~~~~  101 (139)
                         .++.....              ++.++..-.++.+|.+||++++.+.  +|.....
T Consensus       500 I~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~~~~  558 (590)
T KOG1290|consen  500 IRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKHPWLNPVAG  558 (590)
T ss_pred             ccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcCccccCCCC
Confidence               11111111              7778888999999999999998874  4544433

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=97.77  E-value=9.3e-05  Score=57.21  Aligned_cols=85  Identities=16%  Similarity=0.110  Sum_probs=52.5

Q ss_pred             ccchhhhHhHHHHHHHhCCCCCC--cCCcCchHHH---------HHHHHH-hhccchhhhhhhhccCCCCCHH-------
Q 047465            9 IKSDIFSLGVLMLEILSGKKNTE--FYWTDSLIFV---------IYYLRV-ANSHIFLCLWLIINLRHGIYGR-------   69 (139)
Q Consensus         9 ~k~Dv~s~G~~l~ei~~~~~~~~--~~~~~~~~~~---------~~~~~~-~~~~~~~~~~~~~d~~p~~~~~-------   69 (139)
                      .+.||||+|.++|||+++..-..  ...+..+.+-         +.++.. ....          .||.+...       
T Consensus       403 kr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK----------~RP~~p~~W~~h~~~  472 (534)
T KOG3653|consen  403 KRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKK----------QRPKIPDAWRKHAGM  472 (534)
T ss_pred             HHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhc----------cCCCChhhhhcCccH
Confidence            36799999999999999765432  1111011111         111111 1122          22333322       


Q ss_pred             -HHHHHHHHhcccCCCCCCCHHHHHHHHhcccCCC
Q 047465           70 -TTGHWTLLCAQESADDRPTVYDVVSMLTNEATTL  103 (139)
Q Consensus        70 -~~~~l~~~C~~~~p~~Rps~~~v~~~L~~~~~~~  103 (139)
                       .+.+.+..||..|++.|-|+.=+...+..+....
T Consensus       473 ~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~  507 (534)
T KOG3653|consen  473 AVLCETIEECWDHDAEARLTAGCVEERMAELMMLW  507 (534)
T ss_pred             HHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence             6678889999999999999988888777776643

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=97.76  E-value=5e-06  Score=62.42  Aligned_cols=31  Identities=19%  Similarity=0.312  Sum_probs=25.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYW   34 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~   34 (139)
                      +--++..+||||+||++.|+.+|...|...+
T Consensus       283 gLGwS~pCDvWSiGCIL~ElytG~~LFqtHe  313 (415)
T KOG0671|consen  283 GLGWSQPCDVWSIGCILVELYTGETLFQTHE  313 (415)
T ss_pred             ccCcCCccCceeeeeEEEEeeccceecccCC
Confidence            3346889999999999999999988775443

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=97.72  E-value=5.8e-05  Score=58.95  Aligned_cols=78  Identities=14%  Similarity=0.048  Sum_probs=48.3

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcC--chHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTD--SLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      +.-|+..+|-||+||+++||+.|-.||....+.  ...+..|.       ...   ...+  ......+..+++.+|+. 
T Consensus       362 ~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr-------~~l---~fP~--~~~~s~eA~DLI~rll~-  428 (550)
T KOG0605|consen  362 GKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWR-------ETL---KFPE--EVDLSDEAKDLITRLLC-  428 (550)
T ss_pred             cCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh-------hhc---cCCC--cCcccHHHHHHHHHHhc-
Confidence            445888999999999999999999998532221  11122221       001   1111  22223478888888887 


Q ss_pred             CCCCCCC---HHHHHH
Q 047465           82 SADDRPT---VYDVVS   94 (139)
Q Consensus        82 ~p~~Rps---~~~v~~   94 (139)
                      ||..|--   +.||.+
T Consensus       429 d~~~RLG~~G~~EIK~  444 (550)
T KOG0605|consen  429 DPENRLGSKGAEEIKK  444 (550)
T ss_pred             CHHHhcCcccHHHHhc
Confidence            8999954   455543

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.71  E-value=8e-05  Score=53.83  Aligned_cols=91  Identities=11%  Similarity=0.084  Sum_probs=53.5

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcC-chHHHHHHHHHhhccchh-----hhhhhh--c-------------c
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTD-SLIFVIYYLRVANSHIFL-----CLWLII--N-------------L   62 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~--d-------------~   62 (139)
                      ...|+.+.|+|+-||++.||+++...+...-.. ..+++...+..+....++     +++.-+  .             .
T Consensus       203 ~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~  282 (376)
T KOG0669|consen  203 DREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRL  282 (376)
T ss_pred             ccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhc
Confidence            346889999999999999999998665432211 223333222222222111     000000  0             0


Q ss_pred             CCCCCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           63 RHGIYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        63 ~p~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      +|-.......+++...+..||++|+...+++.
T Consensus       283 kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln  314 (376)
T KOG0669|consen  283 KPYVKDDEALDLLEKLLKLDPTKRIDADQALN  314 (376)
T ss_pred             ccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence            01111226788999999999999999988764

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=97.70  E-value=8.3e-05  Score=56.62  Aligned_cols=80  Identities=8%  Similarity=0.007  Sum_probs=51.5

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .|.-.+.++|=|+|||++|||+.|..||..... ..-+.+.+    .+..     ...+  ...-...+.+++...+.+|
T Consensus       308 ~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~-~~Tl~NIv----~~~l-----~Fp~--~~~vs~~akDLIr~LLvKd  375 (459)
T KOG0610|consen  308 RGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNN-KETLRNIV----GQPL-----KFPE--EPEVSSAAKDLIRKLLVKD  375 (459)
T ss_pred             ecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCc-hhhHHHHh----cCCC-----cCCC--CCcchhHHHHHHHHHhccC
Confidence            444567889999999999999999999964322 22222222    1111     1111  1111227788999999999


Q ss_pred             CCCCCC----HHHHHH
Q 047465           83 ADDRPT----VYDVVS   94 (139)
Q Consensus        83 p~~Rps----~~~v~~   94 (139)
                      |.+|--    +.||.+
T Consensus       376 P~kRlg~~rGA~eIK~  391 (459)
T KOG0610|consen  376 PSKRLGSKRGAAEIKR  391 (459)
T ss_pred             hhhhhccccchHHhhc
Confidence            999987    555554

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=97.69  E-value=0.00013  Score=55.89  Aligned_cols=72  Identities=15%  Similarity=0.098  Sum_probs=50.6

Q ss_pred             CccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCCC
Q 047465            8 SIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRP   87 (139)
Q Consensus         8 s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~Rp   87 (139)
                      ...+|.||+|+++|-++.|.-||+..+     +...+.+ +..|...   +     |.-. .+...+..+.+..||+.|-
T Consensus       231 GPEVDsWsLGvLLYtLVyGtMPFDG~D-----hk~lvrQ-Is~GaYr---E-----P~~P-SdA~gLIRwmLmVNP~RRA  295 (668)
T KOG0611|consen  231 GPEVDSWSLGVLLYTLVYGTMPFDGRD-----HKRLVRQ-ISRGAYR---E-----PETP-SDASGLIRWMLMVNPERRA  295 (668)
T ss_pred             CCccchhhHHHHHHHHhhcccccCCch-----HHHHHHH-hhccccc---C-----CCCC-chHHHHHHHHHhcCcccch
Confidence            578899999999999999999998443     2333433 3334332   1     2222 2455667778889999999


Q ss_pred             CHHHHHH
Q 047465           88 TVYDVVS   94 (139)
Q Consensus        88 s~~~v~~   94 (139)
                      ++.++..
T Consensus       296 TieDiAs  302 (668)
T KOG0611|consen  296 TIEDIAS  302 (668)
T ss_pred             hHHHHhh
Confidence            9999875

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.62  E-value=0.00016  Score=55.53  Aligned_cols=71  Identities=14%  Similarity=0.074  Sum_probs=47.0

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .+..|+..+|-||||++++||+.|+.||+.-++.  .+..    .+.+...      .-  |.....+...++..-+...
T Consensus       523 ~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~--elF~----aI~ehnv------sy--PKslSkEAv~ickg~ltK~  588 (683)
T KOG0696|consen  523 AYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED--ELFQ----AIMEHNV------SY--PKSLSKEAVAICKGLLTKH  588 (683)
T ss_pred             EecccccchhHHHHHHHHHHHHcCCCCCCCCCHH--HHHH----HHHHccC------cC--cccccHHHHHHHHHHhhcC
Confidence            4667889999999999999999999999754331  2111    1111111      11  4444446777777778888


Q ss_pred             CCCCC
Q 047465           83 ADDRP   87 (139)
Q Consensus        83 p~~Rp   87 (139)
                      |.+|-
T Consensus       589 P~kRL  593 (683)
T KOG0696|consen  589 PGKRL  593 (683)
T ss_pred             Ccccc
Confidence            87773

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=97.52  E-value=0.00015  Score=48.90  Aligned_cols=45  Identities=29%  Similarity=0.471  Sum_probs=36.3

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      ..+.+.|+|++|++++++                              .               .+.++...|++.+|.+
T Consensus       170 ~~~~~~D~~~lg~~~~~l------------------------------~---------------~~~~~l~~~l~~~p~~  204 (215)
T cd00180         170 YYSEKSDIWSLGVILYEL------------------------------P---------------ELKDLIRKMLQKDPEK  204 (215)
T ss_pred             CCCchhhhHHHHHHHHHH------------------------------H---------------HHHHHHHHHhhCCccc
Confidence            556789999999999998                              1               2344556899999999


Q ss_pred             CCCHHHHHHH
Q 047465           86 RPTVYDVVSM   95 (139)
Q Consensus        86 Rps~~~v~~~   95 (139)
                      ||++.+++..
T Consensus       205 R~~~~~l~~~  214 (215)
T cd00180         205 RPSAKEILEH  214 (215)
T ss_pred             CcCHHHHhhC
Confidence            9999988754

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.41  E-value=0.0003  Score=52.86  Aligned_cols=78  Identities=18%  Similarity=0.225  Sum_probs=49.5

Q ss_pred             CCCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcC--chHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhc
Q 047465            2 ALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTD--SLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCA   79 (139)
Q Consensus         2 ~~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~   79 (139)
                      +++..|...+|-|++|++++||+.|+.||+-....  ..+--++..+.+-+...    .+    |+........+...-+
T Consensus       423 lrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi----ri----prslsvkas~vlkgfl  494 (593)
T KOG0695|consen  423 LRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI----RI----PRSLSVKASHVLKGFL  494 (593)
T ss_pred             hcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc----cc----cceeehhhHHHHHHhh
Confidence            35667889999999999999999999999643221  22223333333322222    11    4433335556667788


Q ss_pred             ccCCCCCC
Q 047465           80 QESADDRP   87 (139)
Q Consensus        80 ~~~p~~Rp   87 (139)
                      .+||++|-
T Consensus       495 nkdp~erl  502 (593)
T KOG0695|consen  495 NKDPKERL  502 (593)
T ss_pred             cCCcHHhc
Confidence            88998874

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=97.33  E-value=0.00038  Score=54.70  Aligned_cols=69  Identities=14%  Similarity=0.122  Sum_probs=43.8

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccc-hhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHI-FLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      ....+|.||+|++++|+++|..||...++..      .+..+-.|. ..   .+    |+--.+...+++......+|.+
T Consensus       596 HD~avDyWaLGIli~ELL~G~pPFs~~dpmk------tYn~ILkGid~i---~~----Pr~I~k~a~~Lik~LCr~~P~E  662 (732)
T KOG0614|consen  596 HDRAVDYWALGILIYELLTGSPPFSGVDPMK------TYNLILKGIDKI---EF----PRRITKTATDLIKKLCRDNPTE  662 (732)
T ss_pred             cchhhHHHHHHHHHHHHHcCCCCCCCCchHH------HHHHHHhhhhhh---hc----ccccchhHHHHHHHHHhcCcHh
Confidence            3567899999999999999999997544321      111111111 11   22    3333336677777666778988


Q ss_pred             CCC
Q 047465           86 RPT   88 (139)
Q Consensus        86 Rps   88 (139)
                      |--
T Consensus       663 RLG  665 (732)
T KOG0614|consen  663 RLG  665 (732)
T ss_pred             hhc
Confidence            864

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=97.31  E-value=0.00053  Score=50.49  Aligned_cols=69  Identities=14%  Similarity=0.072  Sum_probs=43.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ..-+..++|=|||||+++||+.|..||-...+     .. +...+-.+...+        |......+.++....++.|-
T Consensus       215 sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~-----~~-iY~KI~~~~v~f--------P~~fs~~~kdLl~~LL~vD~  280 (355)
T KOG0616|consen  215 SKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP-----IQ-IYEKILEGKVKF--------PSYFSSDAKDLLKKLLQVDL  280 (355)
T ss_pred             cCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh-----HH-HHHHHHhCcccC--------CcccCHHHHHHHHHHHhhhh
Confidence            44577889999999999999999999842211     22 222222232210        44444466667767777766


Q ss_pred             CCC
Q 047465           84 DDR   86 (139)
Q Consensus        84 ~~R   86 (139)
                      ..|
T Consensus       281 t~R  283 (355)
T KOG0616|consen  281 TKR  283 (355)
T ss_pred             Hhh
Confidence            666

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.31  E-value=0.00038  Score=52.10  Aligned_cols=68  Identities=12%  Similarity=0.099  Sum_probs=44.5

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      -|..++|-|++|+++|||++|+.||-..+..  .+...+  .+.+-+.          |+....+...+....+..+|++
T Consensus       344 DYgraVDWWG~GVVMYEMmCGRLPFyn~dh~--kLFeLI--l~ed~kF----------Pr~ls~eAktLLsGLL~kdP~k  409 (516)
T KOG0690|consen  344 DYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE--KLFELI--LMEDLKF----------PRTLSPEAKTLLSGLLKKDPKK  409 (516)
T ss_pred             cccceeehhhhhHHHHHHHhccCcccccchh--HHHHHH--HhhhccC----------CccCCHHHHHHHHHHhhcChHh
Confidence            4778899999999999999999998433221  111211  1111222          3333336677777888999998


Q ss_pred             CC
Q 047465           86 RP   87 (139)
Q Consensus        86 Rp   87 (139)
                      |-
T Consensus       410 RL  411 (516)
T KOG0690|consen  410 RL  411 (516)
T ss_pred             hc
Confidence            84

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=97.26  E-value=0.00056  Score=50.58  Aligned_cols=81  Identities=16%  Similarity=0.136  Sum_probs=52.5

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccch----hhhhhhhccCCCCCHHHHHHHHHHhc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIF----LCLWLIINLRHGIYGRTTGHWTLLCA   79 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~d~~p~~~~~~~~~l~~~C~   79 (139)
                      ..+|+...|+||+||++|-+++|-.||=...+  .-+.-.+...+..+..    .+|..+..        ...++....+
T Consensus       237 ~eKydkscdmwSlgVimYIlLCGyPPFYS~hg--~aispgMk~rI~~gqy~FP~pEWs~VSe--------~aKdlIR~LL  306 (400)
T KOG0604|consen  237 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG--LAISPGMKRRIRTGQYEFPEPEWSCVSE--------AAKDLIRKLL  306 (400)
T ss_pred             chhcCCCCCccchhHHHHHhhcCCCcccccCC--ccCChhHHhHhhccCccCCChhHhHHHH--------HHHHHHHHHh
Confidence            34688889999999999999999988732221  1111112233333332    11112222        6677888888


Q ss_pred             ccCCCCCCCHHHHHH
Q 047465           80 QESADDRPTVYDVVS   94 (139)
Q Consensus        80 ~~~p~~Rps~~~v~~   94 (139)
                      ..+|.+|-++.+++.
T Consensus       307 kt~PteRlTI~~~m~  321 (400)
T KOG0604|consen  307 KTEPTERLTIEEVMD  321 (400)
T ss_pred             cCCchhheeHHHhhc
Confidence            999999999999975

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=97.23  E-value=0.00047  Score=53.44  Aligned_cols=76  Identities=14%  Similarity=0.128  Sum_probs=47.6

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHH-HhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLR-VANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      ..+.|+...|=|++||++|||+.|+.||-.....  .-..-+.+ ..+...     +.    +.-...+...++...++.
T Consensus       359 ~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK--vk~eEvdrr~~~~~~-----ey----~~kFS~eakslc~~LL~K  427 (591)
T KOG0986|consen  359 QNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK--VKREEVDRRTLEDPE-----EY----SDKFSEEAKSLCEGLLTK  427 (591)
T ss_pred             cCCcccCCccHHHHHhHHHHHHcccCchhhhhhh--hhHHHHHHHHhcchh-----hc----ccccCHHHHHHHHHHHcc
Confidence            4567999999999999999999999998543321  10111111 111111     00    112222777888889999


Q ss_pred             CCCCCCCH
Q 047465           82 SADDRPTV   89 (139)
Q Consensus        82 ~p~~Rps~   89 (139)
                      ||.+|--.
T Consensus       428 dp~~RLGc  435 (591)
T KOG0986|consen  428 DPEKRLGC  435 (591)
T ss_pred             CHHHhccC
Confidence            99888543

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=97.13  E-value=0.00022  Score=58.74  Aligned_cols=78  Identities=14%  Similarity=0.247  Sum_probs=53.0

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      .|+.++|+||+|++..||..|..|+.+..+     .. +...+.....+   .+-.  |......+-+++..|+..+-..
T Consensus       204 tyd~R~D~WsLGITaIEladG~PPl~DmHP-----mr-aLF~IpRNPPP---kLkr--p~kWs~~FndFIs~cL~Kd~e~  272 (953)
T KOG0587|consen  204 TYDYRSDLWSLGITAIEMAEGAPPLCDMHP-----MR-ALFLIPRNPPP---KLKR--PKKWSKKFNDFISTCLVKDYEQ  272 (953)
T ss_pred             CcccccchhhccceeehhcCCCCCccCcch-----hh-hhccCCCCCCc---cccc--hhhHHHHHHHHHHHHHhhcccc
Confidence            578899999999999999999988753221     11 11112112111   2211  3333448889999999999999


Q ss_pred             CCCHHHHHH
Q 047465           86 RPTVYDVVS   94 (139)
Q Consensus        86 Rps~~~v~~   94 (139)
                      ||++.++++
T Consensus       273 RP~~~~ll~  281 (953)
T KOG0587|consen  273 RPSTEELLK  281 (953)
T ss_pred             Ccchhhhcc
Confidence            999998875

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=97.07  E-value=0.0015  Score=48.63  Aligned_cols=26  Identities=15%  Similarity=0.379  Sum_probs=22.7

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTE   31 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~   31 (139)
                      -|+.+.||||.||++.|+++.+..|.
T Consensus       216 hYT~AiDvWAiGCIfaElLtl~PlF~  241 (438)
T KOG0666|consen  216 HYTKAIDVWAIGCIFAELLTLEPLFK  241 (438)
T ss_pred             cccchhhhHHHHHHHHHHHccCcccc
Confidence            58899999999999999999776653

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=97.04  E-value=0.0029  Score=53.90  Aligned_cols=79  Identities=20%  Similarity=0.198  Sum_probs=47.9

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      |.|+..+|-||+||++|||+.|..||-     ...++.-.-..++.....   .+++  ...-+.....+...-+ .+|.
T Consensus       256 g~yG~ecDwWSlGV~~YEMlyG~TPFY-----adslveTY~KIm~hk~~l---~FP~--~~~VSeeakdLI~~ll-~~~e  324 (1317)
T KOG0612|consen  256 GEYGRECDWWSLGVFMYEMLYGETPFY-----ADSLVETYGKIMNHKESL---SFPD--ETDVSEEAKDLIEALL-CDRE  324 (1317)
T ss_pred             cccCCccchhhhHHHHHHHHcCCCcch-----HHHHHHHHHHHhchhhhc---CCCc--ccccCHHHHHHHHHHh-cChh
Confidence            789999999999999999999999982     223344333444443333   2322  1222224555554333 3566


Q ss_pred             CCCC---HHHHHH
Q 047465           85 DRPT---VYDVVS   94 (139)
Q Consensus        85 ~Rps---~~~v~~   94 (139)
                      .|-.   +.++..
T Consensus       325 ~RLgrngiedik~  337 (1317)
T KOG0612|consen  325 VRLGRNGIEDIKN  337 (1317)
T ss_pred             hhcccccHHHHHh
Confidence            6766   777654

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=97.02  E-value=0.0012  Score=49.06  Aligned_cols=26  Identities=27%  Similarity=0.399  Sum_probs=23.2

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTE   31 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~   31 (139)
                      .+.+.+||||.||++.||+.|+--|+
T Consensus       193 ~~ke~vdiwSvGci~gEli~~~Vlf~  218 (369)
T KOG0665|consen  193 GYKENVDIWSVGCIMGELILGTVLFP  218 (369)
T ss_pred             CCcccchhhhhhhHHHHHhhceEEec
Confidence            48899999999999999999887665

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=97.00  E-value=0.00062  Score=55.00  Aligned_cols=31  Identities=19%  Similarity=0.330  Sum_probs=27.0

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYW   34 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~   34 (139)
                      .+.|+..+|.||||+++|+++||..||-.+.
T Consensus       198 q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~  228 (732)
T KOG4250|consen  198 QKKYTATVDLWSFGVTLYECATGELPFIPFG  228 (732)
T ss_pred             ccCcCceeehhhhhhHHHHHhccCCCCCcCC
Confidence            3678999999999999999999999995443

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=97.00  E-value=0.0009  Score=56.86  Aligned_cols=80  Identities=18%  Similarity=0.174  Sum_probs=50.6

Q ss_pred             CCccchhhhHhHHHHHHHhC-CCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSG-KKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      ++.+.||||.||++.|+++. +.+|.     -..+..+  +..+.....   .++   ..+....+..+.+.+++.+|.+
T Consensus       215 L~paMDIFS~GCViaELf~Eg~PlF~-----LSQL~aY--r~~~~~~~e---~~L---e~Ied~~~Rnlil~Mi~rdPs~  281 (1431)
T KOG1240|consen  215 LTPAMDIFSAGCVIAELFLEGRPLFT-----LSQLLAY--RSGNADDPE---QLL---EKIEDVSLRNLILSMIQRDPSK  281 (1431)
T ss_pred             cChhhhhhhhhHHHHHHHhcCCCccc-----HHHHHhH--hccCccCHH---HHH---HhCcCccHHHHHHHHHccCchh
Confidence            67899999999999999885 55553     2222222  212111110   111   1122225677888999999999


Q ss_pred             CCCHHHHHHHHhcc
Q 047465           86 RPTVYDVVSMLTNE   99 (139)
Q Consensus        86 Rps~~~v~~~L~~~   99 (139)
                      |-++.+.++.-.+.
T Consensus       282 RlSAedyL~~yrG~  295 (1431)
T KOG1240|consen  282 RLSAEDYLQKYRGL  295 (1431)
T ss_pred             ccCHHHHHHhhhcc
Confidence            99999998874433

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=96.93  E-value=0.00072  Score=47.67  Aligned_cols=28  Identities=36%  Similarity=0.484  Sum_probs=25.2

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCc
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEF   32 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~   32 (139)
                      .-|+-|+||||+|+.+.||.+++-|++.
T Consensus       227 ~gY~vksDvWSLGItmiElA~lr~PY~~  254 (282)
T KOG0984|consen  227 KGYSVKSDVWSLGITMIEMAILRFPYES  254 (282)
T ss_pred             ccceeehhhhhhhhhhhhhhhccccccc
Confidence            3588999999999999999999999864

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=96.89  E-value=0.00043  Score=54.89  Aligned_cols=76  Identities=13%  Similarity=0.035  Sum_probs=50.6

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      ...+.+|+|++|+++|-++.|..||+...     +...-.+.+......         |-....++.++....+-.+|.+
T Consensus       231 y~gpe~D~Wslgvvly~LV~GsLPFDG~~-----lk~Lr~rvl~gk~rI---------p~~ms~dce~lLrk~lvl~Psk  296 (596)
T KOG0586|consen  231 YDGPEVDIWSLGVVLYALVEGSLPFDGQN-----LKELRPRVLRGKYRI---------PFYMSCDCEDLLRKFLVLNPSK  296 (596)
T ss_pred             cCCcceehhhhhhhheeeeecccccCCcc-----cccccchheeeeecc---------cceeechhHHHHHHhhccCccc
Confidence            34688999999999999999999997322     111111111111111         2222236777888888999999


Q ss_pred             CCCHHHHHHH
Q 047465           86 RPTVYDVVSM   95 (139)
Q Consensus        86 Rps~~~v~~~   95 (139)
                      |+++.++...
T Consensus       297 r~~~dqim~~  306 (596)
T KOG0586|consen  297 RGPCDQIMKD  306 (596)
T ss_pred             cCCHHHhhhh
Confidence            9999998753

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=96.75  E-value=0.003  Score=50.09  Aligned_cols=79  Identities=10%  Similarity=0.040  Sum_probs=42.2

Q ss_pred             cchhhhHhHHHHHHHhCCC-CCCcCCcCchHHHH--H---HHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465           10 KSDIFSLGVLMLEILSGKK-NTEFYWTDSLIFVI--Y---YLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus        10 k~Dv~s~G~~l~ei~~~~~-~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +.|+||+||++++|+++.. ++.........+..  .   .+.........+  ...+  .  ......+++..++..+|
T Consensus       412 ~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~--~~~d--~--~s~~~~dLi~~LL~~~~  485 (507)
T PLN03224        412 LFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDF--SLLD--R--NKEAGWDLACKLITKRD  485 (507)
T ss_pred             ccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCc--cccc--c--cChHHHHHHHHHhccCC
Confidence            5799999999999999864 44211110111000  0   011111111100  1111  1  12266778888888765


Q ss_pred             ---CCCCCHHHHHH
Q 047465           84 ---DDRPTVYDVVS   94 (139)
Q Consensus        84 ---~~Rps~~~v~~   94 (139)
                         .+|+++.+++.
T Consensus       486 ~~~~~RlSa~eaL~  499 (507)
T PLN03224        486 QANRGRLSVGQALS  499 (507)
T ss_pred             CCcccCCCHHHHhC
Confidence               68999998864

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=96.74  E-value=0.0014  Score=45.03  Aligned_cols=27  Identities=33%  Similarity=0.525  Sum_probs=23.8

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTE   31 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~   31 (139)
                      ..++.++|+|+||++++|+++|+.||.
T Consensus       175 ~~~~~~~Dv~~lG~~~~~l~~g~~pf~  201 (225)
T smart00221      175 KGYGEAVDIWSLGVILYELLWGPEPFS  201 (225)
T ss_pred             CCCCchhhHHHHHHHHHHHHHCCCCcc
Confidence            355679999999999999999999985

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=96.73  E-value=0.00064  Score=55.84  Aligned_cols=74  Identities=16%  Similarity=0.153  Sum_probs=46.9

Q ss_pred             CCCccchhhhHhHHHHHHHhC-CCCCCcCCcCchHHHHHHHHHhhcc-chhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSG-KKNTEFYWTDSLIFVIYYLRVANSH-IFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      .-+..+|+|++||+++.+++| ..||......+.+       ..... ...   .+ .  +.. .+...++..+.++.+|
T Consensus       690 ~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~N-------Il~~~~~L~---~L-~--~~~-d~eA~dLI~~ml~~dP  755 (903)
T KOG1027|consen  690 RKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQAN-------ILTGNYTLV---HL-E--PLP-DCEAKDLISRMLNPDP  755 (903)
T ss_pred             ccCcccchhhcCceEEEEecCCccCCCchHHhhhh-------hhcCcccee---ee-c--cCc-hHHHHHHHHHhcCCCc
Confidence            345678999999999999886 6676432211111       11111 111   11 1  211 1166788999999999


Q ss_pred             CCCCCHHHHH
Q 047465           84 DDRPTVYDVV   93 (139)
Q Consensus        84 ~~Rps~~~v~   93 (139)
                      ..||++.+|+
T Consensus       756 ~~RPsa~~VL  765 (903)
T KOG1027|consen  756 QLRPSATDVL  765 (903)
T ss_pred             ccCCCHHHHh
Confidence            9999999986

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=96.67  E-value=0.008  Score=43.18  Aligned_cols=90  Identities=12%  Similarity=0.040  Sum_probs=50.9

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHH-----------------------hhccchhhhhhhhc
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRV-----------------------ANSHIFLCLWLIIN   61 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~d   61 (139)
                      ..|.-.-|+|||||++.+|+.++.||-........++..+.-.                       +.......|..++.
T Consensus       208 ~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~  287 (338)
T KOG0668|consen  208 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFIN  287 (338)
T ss_pred             hhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCC
Confidence            3456678999999999999999999843222222333322110                       00001110112221


Q ss_pred             -cCCCCCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           62 -LRHGIYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        62 -~~p~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                       .+..+-..+..++.-..+..|-.+|+++.|.+.
T Consensus       288 ~~n~hl~~peaiDlldklLrYDHqeRlTakEam~  321 (338)
T KOG0668|consen  288 SENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA  321 (338)
T ss_pred             ccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence             001111226778888888889999999887753

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=96.50  E-value=0.0032  Score=51.01  Aligned_cols=81  Identities=14%  Similarity=0.140  Sum_probs=51.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccch-hhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIF-LCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .|-|..++|||+.|+...|+...+.|.....+      ..+...+..... +  +.+-|  +.-....+.++...|+..+
T Consensus       189 kggynqlcdiwa~gitAiel~eLqpplfdlhp------mr~l~LmTkS~~qp--p~lkD--k~kws~~fh~fvK~altkn  258 (829)
T KOG0576|consen  189 KGGYNQLCDIWALGITAIELGELQPPLFDLHP------MRALFLMTKSGFQP--PTLKD--KTKWSEFFHNFVKGALTKN  258 (829)
T ss_pred             cccccccccccccccchhhhhhcCCcccccch------HHHHHHhhccCCCC--CcccC--CccchHHHHHHHHHHhcCC
Confidence            45688999999999999998777766422111      112222222221 1  02223  3333347888999999999


Q ss_pred             CCCCCCHHHHHH
Q 047465           83 ADDRPTVYDVVS   94 (139)
Q Consensus        83 p~~Rps~~~v~~   94 (139)
                      |++||+...++.
T Consensus       259 pKkRptaeklL~  270 (829)
T KOG0576|consen  259 PKKRPTAEKLLQ  270 (829)
T ss_pred             CccCCChhhhee
Confidence            999999987664

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=96.47  E-value=0.007  Score=47.54  Aligned_cols=74  Identities=20%  Similarity=0.197  Sum_probs=45.0

Q ss_pred             CCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      ++..|+.|+|||++|.+++|++. -...+.     ..    .+...+..+.++   +..-  ..  .+.-+.++++.+.+
T Consensus       435 ~g~~y~~kvdIyaLGlil~EL~~~f~T~~e-----r~----~t~~d~r~g~ip---~~~~--~d--~p~e~~ll~~lls~  498 (516)
T KOG1033|consen  435 RGQQYSEKVDIYALGLILAELLIQFSTQFE-----RI----ATLTDIRDGIIP---PEFL--QD--YPEEYTLLQQLLSP  498 (516)
T ss_pred             hhhhhhhhcchhhHHHHHHHHHHHhccHHH-----HH----HhhhhhhcCCCC---hHHh--hc--CcHHHHHHHHhcCC
Confidence            56789999999999999999987 222221     00    111223333333   1110  00  11456788899999


Q ss_pred             CCCCCCCHHHH
Q 047465           82 SADDRPTVYDV   92 (139)
Q Consensus        82 ~p~~Rps~~~v   92 (139)
                      .|.+||++.++
T Consensus       499 ~p~~RP~~~~~  509 (516)
T KOG1033|consen  499 SPEERPSAIEV  509 (516)
T ss_pred             CcccCchHHHH
Confidence            99999955443

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.29  E-value=0.0029  Score=46.49  Aligned_cols=28  Identities=25%  Similarity=0.343  Sum_probs=24.4

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCc
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEF   32 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~   32 (139)
                      ..|+.+.||||+||++.|++.++..|..
T Consensus       233 RhYs~AvDiWSVGCIFaELLgRrILFQA  260 (449)
T KOG0664|consen  233 RRYTGAVDIWSVGCIFAELLQRKILFQA  260 (449)
T ss_pred             hhhcCccceehhhHHHHHHHhhhhhhhc
Confidence            4689999999999999999998877654

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=96.28  E-value=0.0091  Score=41.40  Aligned_cols=27  Identities=19%  Similarity=0.345  Sum_probs=21.2

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCC-CCc
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKN-TEF   32 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~-~~~   32 (139)
                      -|+...|+||-||++.|+....+| |+.
T Consensus       178 ly~tsidmwsagcifaelanagrplfpg  205 (292)
T KOG0662|consen  178 LYSTSIDMWSAGCIFAELANAGRPLFPG  205 (292)
T ss_pred             hhccchHhhhcchHHHHHhhcCCCCCCC
Confidence            467888999999999999875444 443

>PF11883 DUF3403: Domain of unknown function (DUF3403); InterPro: IPR021820 This functionally uncharacterised domain of around 50 amino acids is found in the C terminus of eukaryotic S-locus receptor kinase proteins

Probab=96.23  E-value=0.0054  Score=32.84  Aligned_cols=39  Identities=54%  Similarity=0.752  Sum_probs=28.6

Q ss_pred             CCCCCCCCCCcccccc---C-CCCCCC--CcccccceeeccccCC
Q 047465          101 TTLNPSNRPAFSYNIS---T-SSASKT--EDCSINQVTISLLEAR  139 (139)
Q Consensus       101 ~~~~~~~~~~~~~~~~---~-~~~~~~--~~~~~~~~~~~~~~~~  139 (139)
                      ..++.|+.|.|+....   . +++...  ...|.|++|.+.+++|
T Consensus         4 ~~LP~PKqPgF~~~r~~~e~~sSss~~~~~~~SvNevTiT~l~~R   48 (48)
T PF11883_consen    4 ATLPQPKQPGFFTGRSPSETDSSSSKQRDESCSVNEVTITMLEAR   48 (48)
T ss_pred             ccCCCCCCCCEEeEcCCCCcCCCcccccCCCCCeeeEEEEeEecC
Confidence            3478999999998832   2 223223  4789999999999998

; GO: 0004674 protein serine/threonine kinase activity

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=96.23  E-value=0.0024  Score=50.52  Aligned_cols=31  Identities=23%  Similarity=0.251  Sum_probs=26.5

Q ss_pred             CCCCCCCccchhhhHhHHHHHHHhCCCCCCc
Q 047465            2 ALEGVFSIKSDIFSLGVLMLEILSGKKNTEF   32 (139)
Q Consensus         2 ~~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~   32 (139)
                      +.|-.|+-.-|+||+||++||+.+|+..|+.
T Consensus       607 iLG~~yd~~iD~WSvgctLYElYtGkIlFpG  637 (752)
T KOG0670|consen  607 ILGLPYDYPIDTWSVGCTLYELYTGKILFPG  637 (752)
T ss_pred             eecCcccCCccceeeceeeEEeeccceecCC
Confidence            3566788889999999999999999987764

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=95.94  E-value=0.024  Score=42.63  Aligned_cols=85  Identities=13%  Similarity=0.107  Sum_probs=51.4

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCc---------hHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHH
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDS---------LIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTL   76 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~   76 (139)
                      .|..+.|.||+||++|=|++|-.||-..++..         ..........+.+|..    ++.|.-=..-.....++..
T Consensus       267 ~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkY----eFPdkdWahIS~eakdlis  342 (463)
T KOG0607|consen  267 FYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKY----EFPDKDWAHISSEAKDLIS  342 (463)
T ss_pred             cccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCC----cCChhhhHHhhHHHHHHHH
Confidence            57899999999999999999999986554431         1111112223333332    1111000011115566777


Q ss_pred             HhcccCCCCCCCHHHHHH
Q 047465           77 LCAQESADDRPTVYDVVS   94 (139)
Q Consensus        77 ~C~~~~p~~Rps~~~v~~   94 (139)
                      ..+..++.+|-++..++.
T Consensus       343 nLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  343 NLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             HHHhccHHhhhhhhhccC
Confidence            777889999988887765

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=95.85  E-value=0.016  Score=44.80  Aligned_cols=71  Identities=10%  Similarity=0.049  Sum_probs=46.7

Q ss_pred             ccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCCCC
Q 047465            9 IKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRPT   88 (139)
Q Consensus         9 ~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~Rps   88 (139)
                      +|+|.|+.|.+.||+++...||=  ..++..+-..   .+.+...+   .+    |.-.+..+.+++...++.+|.+|++
T Consensus       436 ~kAD~WA~GalaYEIfg~~NPFY--~rGem~L~~r---~Yqe~qLP---al----p~~vpp~~rqlV~~lL~r~pskRvs  503 (598)
T KOG4158|consen  436 EKADTWAAGALAYEIFGRSNPFY--KRGEMLLDTR---TYQESQLP---AL----PSRVPPVARQLVFDLLKRDPSKRVS  503 (598)
T ss_pred             chhhhhhhhhhHHHHhccCCccc--ccchheechh---hhhhhhCC---CC----cccCChHHHHHHHHHhcCCccccCC
Confidence            68999999999999999998872  2212221111   12333333   33    2222237788888999999999988


Q ss_pred             HHH
Q 047465           89 VYD   91 (139)
Q Consensus        89 ~~~   91 (139)
                      ..-
T Consensus       504 p~i  506 (598)
T KOG4158|consen  504 PNI  506 (598)
T ss_pred             ccH
Confidence            653

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=95.74  E-value=0.0083  Score=44.07  Aligned_cols=80  Identities=13%  Similarity=0.039  Sum_probs=45.6

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDR   86 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~R   86 (139)
                      .....|+|.||++++.+++|+.|+.-..........  +..+..+..+.+++.+.  +  ....++.+-.+-+..++.+|
T Consensus       202 ~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~--~~~w~~rk~~~~P~~F~--~--fs~~a~r~Fkk~lt~~~~dr  275 (378)
T KOG1345|consen  202 VNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWE--WEQWLKRKNPALPKKFN--P--FSEKALRLFKKSLTPRFKDR  275 (378)
T ss_pred             ecccccchheeeeeeeeecCCCcchhhhccCchHHH--HHHHhcccCccCchhhc--c--cCHHHHHHHHHhcCCccccc
Confidence            456789999999999999999998522211222222  33344444431112222  1  12255555666678888888


Q ss_pred             CCHHHH
Q 047465           87 PTVYDV   92 (139)
Q Consensus        87 ps~~~v   92 (139)
                      =.+.++
T Consensus       276 cki~~~  281 (378)
T KOG1345|consen  276 CKIWTA  281 (378)
T ss_pred             chhHHH
Confidence            333333

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=95.43  E-value=0.016  Score=42.73  Aligned_cols=63  Identities=13%  Similarity=0.146  Sum_probs=37.6

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      .++.+.|.|++|+++|.|++++.|++........  .+        ...   .     -...+..+..+..+.++.+|.+
T Consensus       226 ~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~--~~--------~f~---~-----C~~~Pe~v~~LI~~lL~~~~~~  287 (288)
T PF14531_consen  226 PYTFATDAWQLGITLYSLWCGRLPFGLSSPEADP--EW--------DFS---R-----CRDMPEPVQFLIRGLLQRNPED  287 (288)
T ss_dssp             EE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTS--GG--------GGT---T-----SS---HHHHHHHHHHT-SSGGG
T ss_pred             eeeeccCHHHHHHHHHHHHHccCCCCCCCccccc--cc--------cch---h-----cCCcCHHHHHHHHHHccCCccc
Confidence            4678899999999999999999998643221000  00        000   1     1112226777888888888887


Q ss_pred             C
Q 047465           86 R   86 (139)
Q Consensus        86 R   86 (139)
                      |
T Consensus       288 R  288 (288)
T PF14531_consen  288 R  288 (288)
T ss_dssp             S
T ss_pred             C
Confidence            6

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=94.97  E-value=0.027  Score=43.15  Aligned_cols=29  Identities=28%  Similarity=0.255  Sum_probs=24.6

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTE   31 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~   31 (139)
                      +.+.-+++.||||.|++++.+++++-||-
T Consensus       251 k~~~QttaiDiws~GVI~Lslls~~~PFf  279 (418)
T KOG1167|consen  251 RCPRQTTAIDIWSAGVILLSLLSRRYPFF  279 (418)
T ss_pred             hccCcCCccceeeccceeehhhccccccc
Confidence            34456788999999999999999999874

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=93.53  E-value=0.017  Score=46.83  Aligned_cols=83  Identities=13%  Similarity=0.099  Sum_probs=49.5

Q ss_pred             ccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHH---HHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            9 IKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYY---LRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         9 ~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      ...||||.|+++..|++|+.|+.........+....   +.....+..    .+.    ...+.....++-+.++.+|.+
T Consensus       504 r~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~----~~~----~~lp~~~~~~~~~~l~~~P~~  575 (601)
T KOG0590|consen  504 RAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPN----RLL----SLLPRETRIIIYRMLQLDPTK  575 (601)
T ss_pred             chhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChH----HHH----HhchhhHHHHHHHHccCChhh
Confidence            457999999999999999998854322211110000   000001111    110    111125677888999999999


Q ss_pred             CCCHHHHHH--HHhcc
Q 047465           86 RPTVYDVVS--MLTNE   99 (139)
Q Consensus        86 Rps~~~v~~--~L~~~   99 (139)
                      |-++.++++  |+..+
T Consensus       576 R~ti~~i~~d~W~~~i  591 (601)
T KOG0590|consen  576 RITIEQILNDEWIRSI  591 (601)
T ss_pred             eecHHHHhhChHhhhc
Confidence            999999985  44443

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=93.00  E-value=0.14  Score=38.91  Aligned_cols=71  Identities=13%  Similarity=0.060  Sum_probs=39.1

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcC--chHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTD--SLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      .+..+|||+||++.+||..+.-........  ...-+..+......+.-                  ..+...|++-.|.
T Consensus       259 ~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~len~lq------------------r~~i~kcl~~eP~  320 (458)
T KOG1266|consen  259 TTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGLENGLQ------------------RGSITKCLEGEPN  320 (458)
T ss_pred             cccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeeccCccc------------------cCcCcccccCCCC
Confidence            456789999999999997765432111110  00001111111111111                  1233479999999


Q ss_pred             CCCCHHHHHHH
Q 047465           85 DRPTVYDVVSM   95 (139)
Q Consensus        85 ~Rps~~~v~~~   95 (139)
                      +||++.+++..
T Consensus       321 ~rp~ar~llfH  331 (458)
T KOG1266|consen  321 GRPDARLLLFH  331 (458)
T ss_pred             CCcchhhhhcC
Confidence            99999887643

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=91.70  E-value=0.11  Score=42.53  Aligned_cols=27  Identities=26%  Similarity=0.426  Sum_probs=24.0

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFY   33 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~   33 (139)
                      ++..+|-|+.||+++||+.|+.||...
T Consensus       848 ~~q~cdwws~gvil~em~~g~~pf~~~  874 (1034)
T KOG0608|consen  848 YTQLCDWWSVGVILYEMLVGQPPFLAD  874 (1034)
T ss_pred             ccccchhhHhhHHHHHHhhCCCCccCC
Confidence            567889999999999999999999654

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=87.49  E-value=0.76  Score=37.29  Aligned_cols=25  Identities=32%  Similarity=0.472  Sum_probs=22.2

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTE   31 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~   31 (139)
                      ....+|.|+||++++|+++|..||.
T Consensus       168 h~~a~D~ws~gvl~felltg~~pf~  192 (612)
T KOG0603|consen  168 HLSAADWWSFGVLAFELLTGTLPFG  192 (612)
T ss_pred             cCCcccchhhhhhHHHHhhCCCCCc
Confidence            4567899999999999999999884

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=86.25  E-value=4.3  Score=28.53  Aligned_cols=85  Identities=16%  Similarity=0.119  Sum_probs=49.4

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcC--chHHHHHHHHHhhccchhhhhhhhccCCCCC---HHHHHHHHHHhc
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTD--SLIFVIYYLRVANSHIFLCLWLIINLRHGIY---GRTTGHWTLLCA   79 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~---~~~~~~l~~~C~   79 (139)
                      ..++...|+|++|+++++++.+..|+......  .......+...... ...   ....  +...   ...+..+...|.
T Consensus       186 ~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~--~~~~~~~~~~~~~~~~~~~  259 (384)
T COG0515         186 AYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP-SLA---SPLS--PSNPELISKAASDLLKKLL  259 (384)
T ss_pred             CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc-ccc---cccC--ccccchhhHHHHHHHHHHH
Confidence            46778899999999999999999886432210  01111111111100 000   0000  1100   125678888999


Q ss_pred             ccCCCCCCCHHHHHHH
Q 047465           80 QESADDRPTVYDVVSM   95 (139)
Q Consensus        80 ~~~p~~Rps~~~v~~~   95 (139)
                      ..+|..|.+.......
T Consensus       260 ~~~~~~r~~~~~~~~~  275 (384)
T COG0515         260 AKDPKNRLSSSSDLSH  275 (384)
T ss_pred             hcCchhcCCHHHHhhc
Confidence            9999999888776653

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=85.33  E-value=0.087  Score=42.27  Aligned_cols=76  Identities=14%  Similarity=-0.031  Sum_probs=44.9

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      -|...-|+||+|+++|--++|.-||+...+ ..+-+..+...+....+.   ++..        ...++....++..-.+
T Consensus       742 GyNrSLDMWSVGVIiYVsLSGTFPFNEdEd-IndQIQNAaFMyPp~PW~---eis~--------~AidlIn~LLqVkm~k  809 (888)
T KOG4236|consen  742 GYNRSLDMWSVGVIIYVSLSGTFPFNEDED-INDQIQNAAFMYPPNPWS---EISP--------EAIDLINNLLQVKMRK  809 (888)
T ss_pred             cccccccceeeeEEEEEEecccccCCCccc-hhHHhhccccccCCCchh---hcCH--------HHHHHHHHHHHHHHHH
Confidence            366777999999999999999998864222 111111110011111111   2221        6677888888888788


Q ss_pred             CCCHHHHH
Q 047465           86 RPTVYDVV   93 (139)
Q Consensus        86 Rps~~~v~   93 (139)
                      |-+..+.+
T Consensus       810 Rysvdk~l  817 (888)
T KOG4236|consen  810 RYSVDKSL  817 (888)
T ss_pred             hcchHhhc
Confidence            87776554

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=82.50  E-value=1.3  Score=35.98  Aligned_cols=23  Identities=39%  Similarity=0.618  Sum_probs=19.0

Q ss_pred             CccchhhhHhHHHHHHHhCCCCC
Q 047465            8 SIKSDIFSLGVLMLEILSGKKNT   30 (139)
Q Consensus         8 s~k~Dv~s~G~~l~ei~~~~~~~   30 (139)
                      ..|+|||++|.++.|+.-|...+
T Consensus       109 ~pKsdVwsl~~i~~el~L~~~l~  131 (725)
T KOG1093|consen  109 GPKSDVWSLGFIILELYLGISLE  131 (725)
T ss_pred             CcchhhhhHHHHHHHHHHhhHHH
Confidence            36999999999999998776543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	139
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-10
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	2e-09
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	6e-08
3soc_A	322	Activin receptor type-2A; structural genomics cons	4e-07
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	6e-06
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	8e-06
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	9e-06
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	2e-05
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-04
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	1e-04
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-04
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-04
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-04
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-04
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	4e-04
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	4e-04
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	4e-04
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	5e-04
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	6e-04
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	7e-04
3pls_A	298	Macrophage-stimulating protein receptor; protein k	7e-04
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	7e-04
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	7e-04
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	8e-04
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	8e-04
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	8e-04
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	8e-04
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	8e-04
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	8e-04
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	8e-04
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	9e-04

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 56.0 bits (136), Expect = 2e-10
 Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 11/106 (10%)

Query: 3   LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTD-SLI-FVIYYLRVANSHIFLCLWLII 60
           L G  + KSDI+S GV++LEI++G    + +     L+           +     +   I
Sbjct: 207 LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKT-----IEDYI 261

Query: 61  NLRHGIYGRT----TGHWTLLCAQESADDRPTVYDVVSMLTNEATT 102
           + +      T           C  E  + RP +  V  +L     +
Sbjct: 262 DKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 53.4 bits (129), Expect = 2e-09
 Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 27/116 (23%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLW--- 57
           Y   G  S K+D+F  GV++LE+++G++  +     +           +  + L  W   
Sbjct: 206 YLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN-----------DDDVMLLDWVKG 254

Query: 58  LIINLRH---------GIYGRTTGHWTLLCA----QESADDRPTVYDVVSMLTNEA 100
           L+   +          G Y        +  A    Q S  +RP + +VV ML  + 
Sbjct: 255 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 49.1 bits (118), Expect = 6e-08
 Identities = 20/111 (18%), Positives = 41/111 (36%), Gaps = 27/111 (24%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFY----------WTDSLIFVIYYLRVANS 50
           Y ++G  + KSD++S GV++ E+L  +                W           ++ + 
Sbjct: 212 YFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDP 271

Query: 51  HI-----FLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSML 96
           ++        L    +              + C   S++DRP++ DV+  L
Sbjct: 272 NLADKIRPESLRKFGDT------------AVKCLALSSEDRPSMGDVLWKL 310

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 46.6 bits (111), Expect = 4e-07
 Identities = 11/107 (10%), Positives = 36/107 (33%), Gaps = 13/107 (12%)

Query: 3   LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII-- 60
            +    ++ D++++G+++ E+ S     +    + ++   +   +        +  ++  
Sbjct: 211 FQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYML--PFEEEIGQHPSLEDMQEVVVH 268

Query: 61  -NLRHGIYGRTTGHWTLL--------CAQESADDRPTVYDVVSMLTN 98
              R  +      H  +         C    A+ R +   V   +T 
Sbjct: 269 KKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQ 315

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 43.1 bits (102), Expect = 6e-06
 Identities = 18/113 (15%), Positives = 39/113 (34%), Gaps = 28/113 (24%)

Query: 1   YALE----GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLC 55
           YA E      F I SD++S GV + E+L+    ++        +    + ++  +     
Sbjct: 196 YAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTR---- 251

Query: 56  LWLIINLRHG------------IYGRTTGHWTLLCAQESADDRPTVYDVVSML 96
             L+  L+ G            +Y          C +    +R +  +++   
Sbjct: 252 --LVNTLKEGKRLPCPPNCPDEVY-----QLMRKCWEFQPSNRTSFQNLIEGF 297

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 42.7 bits (101), Expect = 8e-06
 Identities = 26/129 (20%), Positives = 43/129 (33%), Gaps = 28/129 (21%)

Query: 1   YALE----GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLC 55
           YA E     +FS +SD++S GV++ E+ +   K+         +        A S     
Sbjct: 197 YAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSR---- 252

Query: 56  LWLIINLRHG------------IYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTL 103
             L+  L  G            ++         LC   S  DRP+   +   L    +  
Sbjct: 253 --LLELLEEGQRLPAPPACPAEVH-----ELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305

Query: 104 NPSNRPAFS 112
                 AF+
Sbjct: 306 RGCETHAFT 314

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 42.5 bits (100), Expect = 9e-06
 Identities = 13/120 (10%), Positives = 36/120 (30%), Gaps = 12/120 (10%)

Query: 7   FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII---NLR 63
              + D+++LG++  EI     +     +     + +   V N   F  + +++     R
Sbjct: 212 ALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQR 271

Query: 64  HGIYGRTTGHWTLL---------CAQESADDRPTVYDVVSMLTNEATTLNPSNRPAFSYN 114
                    +   +         C  + A+ R T       +         +   + + +
Sbjct: 272 PKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKSVSPTAH 331

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 41.9 bits (99), Expect = 2e-05
 Identities = 23/115 (20%), Positives = 38/115 (33%), Gaps = 28/115 (24%)

Query: 1   YALE----GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLC 55
           YA E      F   SD++S GV + E+L+    +         +  I   ++        
Sbjct: 204 YAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLR---- 259

Query: 56  LWLIINLRHG------------IYGRTTGHWTLLCAQESADDRPTVYDVVSMLTN 98
             L   L  G            +Y     H    C +  A  RPT  +++ +L  
Sbjct: 260 --LTELLERGERLPRPDKCPAEVY-----HLMKNCWETEASFRPTFENLIPILKT 307

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 39.2 bits (92), Expect = 1e-04
 Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 29/116 (25%)

Query: 1   YALE----GVFSIKSDIFSLGVLMLEILS--GKKNTEFYWTDSLIFVIYYLRVANSHIFL 54
           YA E      FS+ SD++S GV++ E+ +   K  +       +I      ++   H   
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH--- 240

Query: 55  CLWLIINLRHG------------IYGRTTGHWTLLCAQESADDRPTVYDVVSMLTN 98
              LI  L++             IY          C   + + RP+  D+   +  
Sbjct: 241 ---LIELLKNNGRLPRPDGCPDEIY-----MIMTECWNNNVNQRPSFRDLALRVDQ 288

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 39.2 bits (92), Expect = 1e-04
 Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 7/37 (18%)

Query: 2   ALEGVFSIKSDIFSLGVLMLEILS-------GKKNTE 31
              G +S +SD++S G+L+ E  S          N +
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ 323

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 39.3 bits (92), Expect = 1e-04
 Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 29/116 (25%)

Query: 1   YALE----GVFSIKSDIFSLGVLMLEILS--GKKNTEFYWTDSLIFVIYYLRVANSHIFL 54
           YA E      FS+ SD++S GV++ E+ +   K  +       +I      ++   H   
Sbjct: 215 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH--- 271

Query: 55  CLWLIINLRHG------------IYGRTTGHWTLLCAQESADDRPTVYDVVSMLTN 98
              LI  L++             IY          C   + + RP+  D+   +  
Sbjct: 272 ---LIELLKNNGRLPRPDGCPDEIY-----MIMTECWNNNVNQRPSFRDLALRVDQ 319

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 9/26 (34%), Positives = 17/26 (65%)

Query: 3   LEGVFSIKSDIFSLGVLMLEILSGKK 28
           L+G +   +D+FSLG+ +LE+    +
Sbjct: 228 LQGSYGTAADVFSLGLTILEVACNME 253

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 38.4 bits (90), Expect = 2e-04
 Identities = 27/130 (20%), Positives = 44/130 (33%), Gaps = 28/130 (21%)

Query: 3   LEGVFSIKSDIFSLGVLMLEILS-------GKKNTEFYWTDSLIFVIYYLRVANSHIFLC 55
           +EG+F+ K+D +S GVL+ EI S        K N E         V+ ++          
Sbjct: 218 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE---------VLEFVTSGGR----- 263

Query: 56  LWLIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRPAFSYNI 115
           +    N    +Y          C Q   +DRP    ++  +  E  T +P          
Sbjct: 264 MDPPKNCPGPVY-----RIMTQCWQHQPEDRPNFAIILERI--EYCTQDPDVINTALPIE 316

Query: 116 STSSASKTED 125
                 + E 
Sbjct: 317 YGPLVEEEEK 326

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 38.0 bits (89), Expect = 4e-04
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 16/52 (30%)

Query: 2   ALEGVFSIKSDIFSLGVLMLEILS-------GKKNTEFYWTDSLIFVIYYLR 46
            +   F+ +SD++S GV++ EI +          NTE         VI  + 
Sbjct: 207 IMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE---------VIECIT 249

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 38.0 bits (89), Expect = 4e-04
 Identities = 11/24 (45%), Positives = 18/24 (75%)

Query: 2   ALEGVFSIKSDIFSLGVLMLEILS 25
              G F+IKSD++S G+L+ EI++
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVT 205

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 37.6 bits (88), Expect = 4e-04
 Identities = 13/24 (54%), Positives = 16/24 (66%)

Query: 2   ALEGVFSIKSDIFSLGVLMLEILS 25
            +   FS KSDI++ GVLM EI S
Sbjct: 193 LMYSKFSSKSDIWAFGVLMWEIYS 216

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 37.6 bits (88), Expect = 5e-04
 Identities = 12/23 (52%), Positives = 17/23 (73%)

Query: 3   LEGVFSIKSDIFSLGVLMLEILS 25
           + G FSI SDI+S GV++ E+ S
Sbjct: 203 MYGKFSIDSDIWSYGVVLWEVFS 225

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 37.7 bits (88), Expect = 6e-04
 Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 7/38 (18%)

Query: 3   LEGVFSIKSDIFSLGVLMLEILS-------GKKNTEFY 33
               ++ +SD+++ GV++ EI S       G  + E  
Sbjct: 249 FYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVI 286

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 37.2 bits (87), Expect = 7e-04
 Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 11/42 (26%)

Query: 1   YALE----GVFSIKSDIFSLGVLMLEILS-------GKKNTE 31
            ALE     +++ +SD++S GV + E+++       G   +E
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 37.2 bits (87), Expect = 7e-04
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 2   ALEGVFSIKSDIFSLGVLMLEILS 25
                F+ KSD++S GVL+ E+L+
Sbjct: 200 LQTYRFTTKSDVWSFGVLLWELLT 223

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 37.2 bits (87), Expect = 7e-04
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query: 2   ALEGVFSIKSDIFSLGVLMLEILS 25
                +S KSD+++ G+LM E+ S
Sbjct: 177 FHYFKYSSKSDVWAFGILMWEVFS 200

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 37.4 bits (87), Expect = 7e-04
 Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 28/111 (25%)

Query: 3   LEGVFSIKSDIFSLGVLMLEILS-------GKKNTEFYWTDSLIFVIYYLRVANSHIFLC 55
           +EG+F+ K+D +S GVL+ EI S        K N E         V+ ++          
Sbjct: 259 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE---------VLEFVTSGGR----- 304

Query: 56  LWLIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPS 106
           +    N    +Y          C Q   +DRP    ++  +  E  T +P 
Sbjct: 305 MDPPKNCPGPVY-----RIMTQCWQHQPEDRPNFAIILERI--EYCTQDPD 348

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 37.0 bits (86), Expect = 8e-04
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 7/38 (18%)

Query: 3   LEGVFSIKSDIFSLGVLMLEILS-------GKKNTEFY 33
            + V++ +SD++S GVLM EI +       G    E +
Sbjct: 278 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 315

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 36.8 bits (86), Expect = 8e-04
 Identities = 11/24 (45%), Positives = 16/24 (66%)

Query: 2   ALEGVFSIKSDIFSLGVLMLEILS 25
                FSIKSD+++ GVL+ EI +
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIAT 207

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 37.2 bits (87), Expect = 8e-04
 Identities = 9/38 (23%), Positives = 20/38 (52%), Gaps = 7/38 (18%)

Query: 3   LEGVFSIKSDIFSLGVLMLEILS-------GKKNTEFY 33
            + +++ +SD++S GVL+ EI++       G      +
Sbjct: 225 FDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLF 262

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 36.9 bits (86), Expect = 8e-04
 Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 7/34 (20%)

Query: 5   GVFSIKSDIFSLGVLMLEILS-------GKKNTE 31
             F+  SD++S G++M E+++          N E
Sbjct: 225 RKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE 258

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 36.9 bits (86), Expect = 8e-04
 Identities = 17/125 (13%), Positives = 41/125 (32%), Gaps = 17/125 (13%)

Query: 7   FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGI 66
           +S K D+FS G+++ E+++ +   + +             V N             R  +
Sbjct: 180 YSEKCDVFSWGIILWEVITRR---KPFDEIGGPAFRIMWAVHN-----------GTRPPL 225

Query: 67  YGRTTGHWTLL---CAQESADDRPTVYDVVSMLTNEATTLNPSNRPAFSYNISTSSASKT 123
                     L   C  +    RP++ ++V ++T+       ++ P       +    + 
Sbjct: 226 IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYPCQHSLPPGED 285

Query: 124 EDCSI 128
                
Sbjct: 286 GRVEP 290

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 36.8 bits (86), Expect = 8e-04
 Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 11/42 (26%)

Query: 1   YALE----GVFSIKSDIFSLGVLMLEILS-------GKKNTE 31
            + E      F+  SD++   V M EILS         +N +
Sbjct: 181 MSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD 222

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 36.8 bits (86), Expect = 8e-04
 Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 7/34 (20%)

Query: 5   GVFSIKSDIFSLGVLMLEILS-------GKKNTE 31
             F+  SD++  GV M EIL        G KN +
Sbjct: 192 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 225

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 37.0 bits (86), Expect = 9e-04
 Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 7/38 (18%)

Query: 3   LEGVFSIKSDIFSLGVLMLEILS-------GKKNTEFY 33
            + +++ +SD++S GVL+ EI +       G    E +
Sbjct: 266 FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 303

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	139
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.66
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.64
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.63
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.62
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.61
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.51
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.43
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.41
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.38
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.37
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.37
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.36
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.35
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.35
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.34
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.33
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.32
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.31
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.31
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.31
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.31
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.3
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.3
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.29
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.29
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.29
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.28
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.28
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.28
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.27
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.27
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.26
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.26
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.25
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.25
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.25
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.24
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.24
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.24
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.24
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.24
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.23
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.23
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.23
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.23
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.23
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.23
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.22
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.22
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.22
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.21
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.21
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.21
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.2
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.2
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.2
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.2
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.2
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.2
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.19
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.19
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.19
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.19
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.19
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.19
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.19
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.18
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.18
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.18
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.18
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.18
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.18
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.18
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.17
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.17
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.16
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.16
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.16
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.16
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.16
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.16
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.15
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.15
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.15
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.15
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.15
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.15
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.14
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.14
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.14
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.13
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.13
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.13
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.12
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.12
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.12
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.12
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.11
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.11
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.1
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.1
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.1
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.1
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.1
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.1
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.09
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.09
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.09
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.08
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.08
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.08
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.07
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.07
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.07
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.07
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.07
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.07
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.07
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.06
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.06
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.06
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.06
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.05
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.05
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.05
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.04
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.04
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.04
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.04
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.04
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.04
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.04
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.03
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.02
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.02
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.02
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.02
3bhy_A	283	Death-associated protein kinase 3; death associate	99.01
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.01
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.01
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.01
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.01
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.01
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.01
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.01
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.01
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	98.99
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	98.99
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	98.99
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	98.99
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	98.99
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	98.99
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	98.99
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	98.99
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	98.97
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	98.97
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	98.97
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	98.97
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	98.97
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	98.97
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	98.96
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	98.96
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	98.96
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	98.96
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	98.96
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	98.96
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	98.96
3uqc_A	286	Probable conserved transmembrane protein; structur	98.95
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	98.95
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	98.95
3niz_A	311	Rhodanese family protein; structural genomics, str	98.95
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	98.95
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	98.95
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	98.95
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	98.95
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	98.95
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	98.94
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	98.94
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	98.94
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	98.93
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	98.93
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	98.93
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	98.93
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	98.92
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	98.91
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	98.91
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	98.91
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	98.91
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	98.91
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	98.91
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	98.91
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	98.91
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	98.91
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	98.9
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	98.9
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	98.9
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	98.9
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	98.9
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	98.9
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	98.89
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	98.89
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	98.89
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	98.89
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	98.88
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	98.88
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	98.88
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	98.88
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	98.87
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	98.87
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	98.86
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	98.86
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	98.86
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	98.86
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	98.86
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	98.86
3o0g_A	292	Cell division protein kinase 5; kinase activator c	98.85
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	98.85
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	98.85
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	98.85
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	98.85
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	98.84
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	98.84
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	98.84
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	98.84
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	98.83
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	98.83
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	98.82
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	98.8
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	98.8
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	98.8
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	98.79
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	98.78
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	98.78
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	98.76
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	98.72
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	98.71
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	98.68
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	98.68
3rp9_A	458	Mitogen-activated protein kinase; structural genom	98.67
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	98.64
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	98.56
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	98.55
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	98.47
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	98.14
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	94.08

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.66  E-value=2.2e-16  Score=115.45  Aligned_cols=93  Identities=14%  Similarity=0.195  Sum_probs=63.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      .+.|+.++|||||||++|||++|+.||.....  ..   .+......+....  .+.. .+...+..+.+++..||+.+|
T Consensus       211 ~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~--~~---~~~~~~~~~~~~p--~~~~-~~~~~~~~l~~li~~cl~~dP  282 (307)
T 3omv_A          211 NNPFSFQSDVYSYGIVLYELMTGELPYSHINN--RD---QIIFMVGRGYASP--DLSK-LYKNCPKAMKRLVADCVKKVK  282 (307)
T ss_dssp             SCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC--HH---HHHHHHHTTCCCC--CSTT-SCTTSCHHHHHHHHHHTCSSS
T ss_pred             CCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh--HH---HHHHHHhcCCCCC--Cccc-ccccchHHHHHHHHHHcCCCH
Confidence            34689999999999999999999999864321  11   1112222222110  1100 022233488999999999999


Q ss_pred             CCCCCHHHHHHHHhcccCCCC
Q 047465           84 DDRPTVYDVVSMLTNEATTLN  104 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~~~~  104 (139)
                      .+||+|.+++..|+.+...++
T Consensus       283 ~~RPs~~ei~~~Le~l~~~lp  303 (307)
T 3omv_A          283 EERPLFPQILSSIELLQHSLP  303 (307)
T ss_dssp             TTSCCHHHHHHHHHHHHTTCC
T ss_pred             hHCcCHHHHHHHHHHHhccCC
Confidence            999999999999988776553

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.64  E-value=2.2e-16  Score=116.46  Aligned_cols=87  Identities=22%  Similarity=0.179  Sum_probs=64.9

Q ss_pred             CCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      .++.++.++|||||||++|||++ |+.||....  .....    ..+..+...   +.    |...+..+.+++..||+.
T Consensus       233 ~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~--~~~~~----~~i~~g~~~---~~----p~~~~~~~~~li~~cl~~  299 (329)
T 4aoj_A          233 LYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS--NTEAI----DCITQGREL---ER----PRACPPEVYAIMRGCWQR  299 (329)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC--HHHHH----HHHHHTCCC---CC----CTTCCHHHHHHHHHHCCS
T ss_pred             cCCCCCccccccchHHHHHHHHcCCCCCCCCCC--HHHHH----HHHHcCCCC---CC----cccccHHHHHHHHHHcCc
Confidence            45679999999999999999998 899985322  11222    222223322   11    444555899999999999


Q ss_pred             CCCCCCCHHHHHHHHhcccCC
Q 047465           82 SADDRPTVYDVVSMLTNEATT  102 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~~~~~~  102 (139)
                      ||.+||+|.+|+..|+.+.+.
T Consensus       300 dP~~RPs~~ei~~~L~~l~~~  320 (329)
T 4aoj_A          300 EPQQRHSIKDVHARLQALAQA  320 (329)
T ss_dssp             STTTSCCHHHHHHHHHHHHHS
T ss_pred             ChhHCcCHHHHHHHHHHHhhC
Confidence            999999999999999988764

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.63  E-value=2.2e-16  Score=115.54  Aligned_cols=84  Identities=26%  Similarity=0.264  Sum_probs=62.3

Q ss_pred             CCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      .++.|+.++|||||||++|||++ |+.||....  ...    +...+..+...   +.    |..++..+.+++..||+.
T Consensus       220 ~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~--~~~----~~~~i~~~~~~---~~----p~~~~~~~~~li~~C~~~  286 (308)
T 4gt4_A          220 MYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS--NQD----VVEMIRNRQVL---PC----PDDCPAWVYALMIECWNE  286 (308)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC--HHH----HHHHHHTTCCC---CC----CTTCCHHHHHHHHHHTCS
T ss_pred             hCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC--HHH----HHHHHHcCCCC---CC----cccchHHHHHHHHHHcCC
Confidence            45679999999999999999998 788886322  112    22223333333   22    444455899999999999


Q ss_pred             CCCCCCCHHHHHHHHhcc
Q 047465           82 SADDRPTVYDVVSMLTNE   99 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~~~   99 (139)
                      +|.+||+|.+|+..|+..
T Consensus       287 dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          287 FPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             SGGGSCCHHHHHHHHHTS
T ss_pred             ChhHCcCHHHHHHHHHhc
Confidence            999999999999999864

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.62  E-value=2e-16  Score=115.30  Aligned_cols=87  Identities=22%  Similarity=0.241  Sum_probs=64.2

Q ss_pred             CCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      .++.|+.++|||||||++|||++ |+.||....  ...    +...+..+...   ..    |...+..+.+++..||+.
T Consensus       203 ~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~--~~~----~~~~i~~~~~~---~~----p~~~~~~~~~li~~cl~~  269 (299)
T 4asz_A          203 MYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS--NNE----VIECITQGRVL---QR----PRTCPQEVYELMLGCWQR  269 (299)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC--HHH----HHHHHHHTCCC---CC----CTTCCHHHHHHHHHHTCS
T ss_pred             cCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC--HHH----HHHHHHcCCCC---CC----CccchHHHHHHHHHHcCC
Confidence            35678999999999999999998 899986322  111    11222233332   11    444555899999999999


Q ss_pred             CCCCCCCHHHHHHHHhcccCC
Q 047465           82 SADDRPTVYDVVSMLTNEATT  102 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~~~~~~  102 (139)
                      +|.+||++.+++..|+++...
T Consensus       270 dP~~RPs~~~i~~~L~~~~~~  290 (299)
T 4asz_A          270 EPHMRKNIKGIHTLLQNLAKA  290 (299)
T ss_dssp             SGGGSCCHHHHHHHHHHHHHH
T ss_pred             ChhHCcCHHHHHHHHHHHHhc
Confidence            999999999999999987653

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.61  E-value=1.7e-16  Score=118.04  Aligned_cols=87  Identities=24%  Similarity=0.280  Sum_probs=64.3

Q ss_pred             CCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      .++.|+.++|||||||++|||++ |+.||..... ...    +...+..+...   ..    |......+.+++..||+.
T Consensus       260 ~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~-~~~----~~~~i~~g~~~---~~----p~~~~~~~~~li~~c~~~  327 (353)
T 4ase_A          260 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEE----FCRRLKEGTRM---RA----PDYTTPEMYQTMLDCWHG  327 (353)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC-SHH----HHHHHHHTCCC---CC----CTTCCHHHHHHHHHHTCS
T ss_pred             hcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH-HHH----HHHHHHcCCCC---CC----CccCCHHHHHHHHHHcCc
Confidence            35678999999999999999998 8999864322 111    22223333333   22    444455899999999999


Q ss_pred             CCCCCCCHHHHHHHHhcccC
Q 047465           82 SADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~~~~~  101 (139)
                      ||.+||++.+++..|+++.+
T Consensus       328 dP~~RPt~~eil~~L~~llq  347 (353)
T 4ase_A          328 EPSQRPTFSELVEHLGNLLQ  347 (353)
T ss_dssp             SGGGSCCHHHHHHHHHHHHH
T ss_pred             ChhHCcCHHHHHHHHHHHHH
Confidence            99999999999999987654

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.51  E-value=8.2e-15  Score=106.83  Aligned_cols=93  Identities=14%  Similarity=0.013  Sum_probs=57.2

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcC----------chHHHHHHHHHhhccchhhhhhhhccC-CCCCHHHHHHH
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTD----------SLIFVIYYLRVANSHIFLCLWLIINLR-HGIYGRTTGHW   74 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~d~~-p~~~~~~~~~l   74 (139)
                      .++.++|||||||++|||++|+.++......          ..............+..+   .+.+.- .......+.++
T Consensus       194 ~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp---~~p~~~~~~~~~~~l~~l  270 (303)
T 3hmm_A          194 ESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRP---NIPNRWQSCEALRVMAKI  270 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCC---CCCGGGGSSHHHHHHHHH
T ss_pred             ccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCC---CCCccccchHHHHHHHHH
Confidence            4678999999999999999998765322111          011111111112222222   111100 11111267899


Q ss_pred             HHHhcccCCCCCCCHHHHHHHHhcccC
Q 047465           75 TLLCAQESADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        75 ~~~C~~~~p~~Rps~~~v~~~L~~~~~  101 (139)
                      +..||+.||.+||+|.++++.|+++..
T Consensus       271 i~~cl~~dP~~RPt~~ei~~~L~~l~~  297 (303)
T 3hmm_A          271 MRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             HHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence            999999999999999999999987654

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.43  E-value=1.8e-13  Score=101.22  Aligned_cols=91  Identities=15%  Similarity=0.138  Sum_probs=62.2

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .+..|+.++||||+||++|||++|+.||........  ...+   .......  ..+    |......+.+++.+||+.|
T Consensus       229 ~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~--~~~i---~~~~~~~--~~~----~~~~s~~~~~li~~~L~~d  297 (336)
T 4g3f_A          229 MGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL--CLKI---ASEPPPI--REI----PPSCAPLTAQAIQEGLRKE  297 (336)
T ss_dssp             TTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC--HHHH---HHSCCGG--GGS----CTTSCHHHHHHHHHHTCSS
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH--HHHH---HcCCCCc--hhc----CccCCHHHHHHHHHHccCC
Confidence            456789999999999999999999999964332211  1111   1111111  011    2222337889999999999


Q ss_pred             CCCCCCHHHHHHHHhcccCCCC
Q 047465           83 ADDRPTVYDVVSMLTNEATTLN  104 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~~~~  104 (139)
                      |.+||++.++++.|........
T Consensus       298 P~~R~sa~el~~~l~~~l~~~~  319 (336)
T 4g3f_A          298 PVHRASAMELRRKVGKALQEVG  319 (336)
T ss_dssp             GGGSCCHHHHHHHHHHHHHHTT
T ss_pred             HhHCcCHHHHHHHHHHHHhhhh
Confidence            9999999999998876654333

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.41  E-value=3.4e-13  Score=97.89  Aligned_cols=79  Identities=14%  Similarity=0.188  Sum_probs=55.0

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +.|+.++|||||||++|||++|+.||..... .    ..+...+..+..+   ..+   +......+.+++.+||+.||.
T Consensus       204 ~~y~~~~DiwSlGvilyelltg~~Pf~~~~~-~----~~~~~~i~~~~~~---~~~---~~~~~~~~~~li~~~L~~dP~  272 (290)
T 3fpq_A          204 EKYDESVDVYAFGMCMLEMATSEYPYSECQN-A----AQIYRRVTSGVKP---ASF---DKVAIPEVKEIIEGCIRQNKD  272 (290)
T ss_dssp             TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-H----HHHHHHHTTTCCC---GGG---GGCCCHHHHHHHHHHSCSSGG
T ss_pred             CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-H----HHHHHHHHcCCCC---CCC---CccCCHHHHHHHHHHccCChh
Confidence            4689999999999999999999999853221 1    1122223333222   111   122223788999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       273 ~R~s~~e~l~  282 (290)
T 3fpq_A          273 ERYSIKDLLN  282 (290)
T ss_dssp             GSCCHHHHHT
T ss_pred             HCcCHHHHhc
Confidence            9999999875

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.38  E-value=1.4e-12  Score=94.52  Aligned_cols=98  Identities=14%  Similarity=0.225  Sum_probs=67.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||||++++||++|+.|+.........   .... ...+...   ..    +...+..+.+++..||+.+|
T Consensus       177 ~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~---~~~~-~~~~~~~---~~----~~~~~~~l~~li~~~l~~dp  245 (307)
T 2eva_A          177 GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR---IMWA-VHNGTRP---PL----IKNLPKPIESLMTRCWSKDP  245 (307)
T ss_dssp             CCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHH---HHHH-HHTTCCC---CC----BTTCCHHHHHHHHHHTCSSG
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHH---HHHH-HhcCCCC---Cc----ccccCHHHHHHHHHHhcCCh
Confidence            456789999999999999999999998643221111   1111 1112221   11    12223378899999999999


Q ss_pred             CCCCCHHHHHHHHhcccCCCCCCCCCCcc
Q 047465           84 DDRPTVYDVVSMLTNEATTLNPSNRPAFS  112 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~~~~~~~~~~~~  112 (139)
                      .+||++.+++..|+.+....+....|..+
T Consensus       246 ~~Rps~~ell~~L~~~~~~~~~~~~~~~~  274 (307)
T 2eva_A          246 SQRPSMEEIVKIMTHLMRYFPGADEPLQY  274 (307)
T ss_dssp             GGSCCHHHHHHHHHHHGGGCCCTTSCCCC
T ss_pred             hhCcCHHHHHHHHHHHHHhccCCCCcccc
Confidence            99999999999999988766655554433

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.37  E-value=2.1e-12  Score=92.54  Aligned_cols=96  Identities=13%  Similarity=0.047  Sum_probs=63.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcC-chHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTD-SLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||+|++++||++|+.||...... .......+..........   .+.   +. .+..+.+++..||+.+
T Consensus       192 ~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~-~~~~l~~li~~~l~~d  264 (298)
T 1csn_A          192 GREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLR---ELC---AG-FPEEFYKYMHYARNLA  264 (298)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHH---HHT---TT-SCHHHHHHHHHHHHCC
T ss_pred             CCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHH---HHH---hh-CcHHHHHHHHHHhcCC
Confidence            345789999999999999999999998654322 111111111111001111   111   11 2237889999999999


Q ss_pred             CCCCCCHHHHHHHHhcccCCCCCC
Q 047465           83 ADDRPTVYDVVSMLTNEATTLNPS  106 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~~~~~~  106 (139)
                      |.+||++.+++..|+++.......
T Consensus       265 p~~RP~~~~l~~~l~~~~~~~~~~  288 (298)
T 1csn_A          265 FDATPDYDYLQGLFSKVLERLNTT  288 (298)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred             cccCCCHHHHHHHHHHHHHhcCCC
Confidence            999999999999999877655433

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.37  E-value=2.3e-12  Score=92.29  Aligned_cols=95  Identities=14%  Similarity=0.034  Sum_probs=63.0

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcC-chHHHHHH-HHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTD-SLIFVIYY-LRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      +..++.++||||||++++|+++|+.||...... .......+ ...... ..    ...   +...+..+.+++..||+.
T Consensus       189 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~----~~~---~~~~~~~l~~li~~~l~~  260 (296)
T 3uzp_A          189 GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-PI----EVL---CKGYPSEFATYLNFCRSL  260 (296)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-CH----HHH---TTTSCHHHHHHHHHHHTS
T ss_pred             CCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCC-ch----HHH---HhhCCHHHHHHHHHHHhc
Confidence            345788999999999999999999998643221 11111111 111110 00    111   112223788999999999


Q ss_pred             CCCCCCCHHHHHHHHhcccCCCCCC
Q 047465           82 SADDRPTVYDVVSMLTNEATTLNPS  106 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~~~~~~~~~~  106 (139)
                      +|.+||++.+++..|+++......+
T Consensus       261 dp~~Rps~~~l~~~l~~~~~~~~~~  285 (296)
T 3uzp_A          261 RFDDKPDYSYLRQLFRNLFHRQGFS  285 (296)
T ss_dssp             CTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred             CcCcCCCHHHHHHHHHHHHHhcCCc
Confidence            9999999999999999876654443

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.36  E-value=2.2e-12  Score=95.57  Aligned_cols=106  Identities=10%  Similarity=0.051  Sum_probs=68.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhc--cCCCCCHHHHHHHHHHhccc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIIN--LRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~~p~~~~~~~~~l~~~C~~~   81 (139)
                      +..++.++||||||+++|||++|+.||..... .............. ...   .+++  ..+......+..++..||+.
T Consensus       235 ~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~-~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~li~~cl~~  309 (364)
T 3op5_A          235 GVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK-DPKYVRDSKIRYRE-NIA---SLMDKCFPAANAPGEIAKYMETVKLL  309 (364)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT-CHHHHHHHHHHHHH-CHH---HHHHHHSCTTCCCHHHHHHHHHHHTC
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCcccccc-CHHHHHHHHHHhhh-hHH---HHHHHhcccccCHHHHHHHHHHHhcC
Confidence            34578999999999999999999999964322 22222212111111 111   2221  00122334889999999999


Q ss_pred             CCCCCCCHHHHHHHHhcccCCCCCCCCCCcccc
Q 047465           82 SADDRPTVYDVVSMLTNEATTLNPSNRPAFSYN  114 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~~~~~~~~~~~~~~~~~~  114 (139)
                      +|.+||++.+++..|++............+-|.
T Consensus       310 ~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~  342 (364)
T 3op5_A          310 DYTEKPLYENLRDILLQGLKAIGSKDDGKLDLS  342 (364)
T ss_dssp             CTTCCCCHHHHHHHHHHHHHHTTCCCCCCCCC-
T ss_pred             CCCCCCCHHHHHHHHHHHHHHcCCCcCCccceE
Confidence            999999999999999987775555444444443

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.35  E-value=1.5e-12  Score=94.24  Aligned_cols=98  Identities=17%  Similarity=0.185  Sum_probs=58.6

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++||||||++++||++|+.|+.....  .   ... .....+...   ...   +......+..++..||+.+|.
T Consensus       218 ~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~---~~~-~~~~~~~~~---~~~---~~~~~~~l~~li~~~l~~~p~  285 (319)
T 2y4i_B          218 LPFSKHSDVFALGTIWYELHAREWPFKTQPA--E---AII-WQMGTGMKP---NLS---QIGMGKEISDILLFCWAFEQE  285 (319)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH--H---HHH-HHHHTTCCC---CCC---CSSCCTTHHHHHHHHHCSSTT
T ss_pred             cCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--H---HHH-HHhccCCCC---CCC---cCCCCHHHHHHHHHHhcCChh
Confidence            3578899999999999999999999853221  1   111 112222221   111   111223788999999999999


Q ss_pred             CCCCHHHHHHHHhcccCCCCCCCCCCcccc
Q 047465           85 DRPTVYDVVSMLTNEATTLNPSNRPAFSYN  114 (139)
Q Consensus        85 ~Rps~~~v~~~L~~~~~~~~~~~~~~~~~~  114 (139)
                      +||++.+++..|+.+.........|..++.
T Consensus       286 ~Rpt~~~l~~~l~~l~~~~~~~~~~~~~~~  315 (319)
T 2y4i_B          286 ERPTFTKLMDMLEKLPKRNRRLSHPGHFWK  315 (319)
T ss_dssp             TSCCHHHHHHHHTTC---------------
T ss_pred             hCcCHHHHHHHHHHHHHhhccCCCCccccc
Confidence            999999999999998876555445555443

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.34  E-value=1.3e-12  Score=95.06  Aligned_cols=93  Identities=23%  Similarity=0.350  Sum_probs=64.5

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcC-chHHHHHHHHHhhccchhhhhhhhccCCCC----C---HHHHHHHH
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTD-SLIFVIYYLRVANSHIFLCLWLIINLRHGI----Y---GRTTGHWT   75 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~----~---~~~~~~l~   75 (139)
                      ++.++.++||||+|+++||+++|+.|+...... ......+.......+...   .+.+  +..    .   ...+.+++
T Consensus       215 ~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~l~~li  289 (321)
T 2qkw_B          215 KGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE---QIVD--PNLADKIRPESLRKFGDTA  289 (321)
T ss_dssp             HCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCC---SSSS--SSCTTCSCHHHHHHHHHHH
T ss_pred             CCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHH---HhcC--hhhccccCHHHHHHHHHHH
Confidence            345788999999999999999999998643332 223333333333333322   3332  221    1   12788899


Q ss_pred             HHhcccCCCCCCCHHHHHHHHhcccC
Q 047465           76 LLCAQESADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        76 ~~C~~~~p~~Rps~~~v~~~L~~~~~  101 (139)
                      ..||+.+|.+||++.+++..|+....
T Consensus       290 ~~~l~~dP~~Rps~~ell~~L~~~l~  315 (321)
T 2qkw_B          290 VKCLALSSEDRPSMGDVLWKLEYALR  315 (321)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHcCCCcccCcCHHHHHHHHHHHhh
Confidence            99999999999999999999998765

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.33  E-value=1.3e-11  Score=90.85  Aligned_cols=95  Identities=18%  Similarity=0.124  Sum_probs=61.3

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||||+++|||++|+.||......... ...............+.....  .......+.+++..||+.+|
T Consensus       234 ~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp  310 (345)
T 2v62_A          234 GVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA-VQTAKTNLLDELPQSVLKWAP--SGSSCCEIAQFLVCAHSLAY  310 (345)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHH-HHHHHHHHHHTTTHHHHHHSC--TTSCCHHHHHHHHHHHTCCT
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCccccccccHH-HHHHHHhhcccccHHHHhhcc--ccccHHHHHHHHHHHhhcCc
Confidence            345789999999999999999999998532221111 111111111111110001111  11233488999999999999


Q ss_pred             CCCCCHHHHHHHHhcccC
Q 047465           84 DDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~  101 (139)
                      .+||++.+++..|++...
T Consensus       311 ~~Rps~~~l~~~L~~~~~  328 (345)
T 2v62_A          311 DEKPNYQALKKILNPHGI  328 (345)
T ss_dssp             TCCCCHHHHHHHHCTTCC
T ss_pred             ccCCCHHHHHHHHhccCC
Confidence            999999999999998655

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.32  E-value=2.3e-12  Score=93.64  Aligned_cols=87  Identities=16%  Similarity=0.117  Sum_probs=60.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|+++||+++|+.||.....  ...   ...........   .+    |......+.+++..||+.+|
T Consensus       213 ~~~~~~~~DiwslG~il~elltg~~Pf~~~~~--~~~---~~~~~~~~~~~---~~----~~~~~~~l~~li~~~l~~dP  280 (309)
T 3p86_A          213 DEPSNEKSDVYSFGVILWELATLQQPWGNLNP--AQV---VAAVGFKCKRL---EI----PRNLNPQVAAIIEGCWTNEP  280 (309)
T ss_dssp             TCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH--HHH---HHHHHHSCCCC---CC----CTTSCHHHHHHHHHHTCSSG
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHH---HHHHHhcCCCC---CC----CccCCHHHHHHHHHHccCCh
Confidence            45578899999999999999999999863321  111   11111111111   11    33333488999999999999


Q ss_pred             CCCCCHHHHHHHHhcccCC
Q 047465           84 DDRPTVYDVVSMLTNEATT  102 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~~  102 (139)
                      .+||++.++++.|+.+...
T Consensus       281 ~~Rps~~~ll~~L~~~~~~  299 (309)
T 3p86_A          281 WKRPSFATIMDLLRPLIKS  299 (309)
T ss_dssp             GGSCCHHHHHHHHHHHHC-
T ss_pred             hhCcCHHHHHHHHHHHHHh
Confidence            9999999999999987764

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.31  E-value=3.9e-12  Score=97.01  Aligned_cols=87  Identities=21%  Similarity=0.253  Sum_probs=62.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||+++|||++ |+.|+.....  ..    +...+..+...   ..    |...+..+.+++..||+.+
T Consensus       355 ~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--~~----~~~~i~~~~~~---~~----~~~~~~~l~~li~~cl~~d  421 (452)
T 1fmk_A          355 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--RE----VLDQVERGYRM---PC----PPECPESLHDLMCQCWRKE  421 (452)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HH----HHHHHHTTCCC---CC----CTTSCHHHHHHHHHHTCSS
T ss_pred             cCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH--HH----HHHHHHcCCCC---CC----CCCCCHHHHHHHHHHccCC
Confidence            3568899999999999999999 8888753211  11    11222223222   11    3333447899999999999


Q ss_pred             CCCCCCHHHHHHHHhcccCCC
Q 047465           83 ADDRPTVYDVVSMLTNEATTL  103 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~~~  103 (139)
                      |.+||++.+++..|+......
T Consensus       422 P~~Rpt~~~l~~~L~~~~~~~  442 (452)
T 1fmk_A          422 PEERPTFEYLQAFLEDYFTST  442 (452)
T ss_dssp             GGGSCCHHHHHHHHHTTTSCS
T ss_pred             hhhCcCHHHHHHHHHHHhccC
Confidence            999999999999999877643

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.31  E-value=6.2e-12  Score=89.94  Aligned_cols=92  Identities=13%  Similarity=0.039  Sum_probs=61.3

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcC-chHHHHHH-HHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTD-SLIFVIYY-LRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      +..++.++||||+|++++++++|+.||...... ........ ...... ..    ...   ....+..+.+++..||+.
T Consensus       189 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~----~~~---~~~~~~~l~~li~~~l~~  260 (296)
T 4hgt_A          189 GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-PI----EVL---CKGYPSEFATYLNFCRSL  260 (296)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-CH----HHH---TTTSCHHHHHHHHHHHTS
T ss_pred             CCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc-hh----hhh---hccCCHHHHHHHHHHHhc
Confidence            345788999999999999999999998653322 11111111 111110 00    111   111223789999999999


Q ss_pred             CCCCCCCHHHHHHHHhcccCCC
Q 047465           82 SADDRPTVYDVVSMLTNEATTL  103 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~~~~~~~  103 (139)
                      +|.+||++.++++.|+++....
T Consensus       261 ~p~~Rpt~~~l~~~l~~~~~~~  282 (296)
T 4hgt_A          261 RFDDKPDYSYLRQLFRNLFHRQ  282 (296)
T ss_dssp             CTTCCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHh
Confidence            9999999999999998876543

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.31  E-value=1.9e-12  Score=96.06  Aligned_cols=81  Identities=14%  Similarity=0.110  Sum_probs=54.5

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .+..|+.++||||+||++|||++|+.||....  ......    .+......   .+..  +......+.+++.+||+.|
T Consensus       243 ~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~~~----~i~~~~~~---~~~~--~~~~s~~~~dli~~~L~~d  311 (346)
T 4fih_A          243 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--PLKAMK----MIRDNLPP---RLKN--LHKVSPSLKGFLDRLLVRD  311 (346)
T ss_dssp             TTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHH----HHHHSSCC---CCSC--GGGSCHHHHHHHHHHSCSS
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--HHHHHH----HHHcCCCC---CCCc--cccCCHHHHHHHHHHcCCC
Confidence            34568999999999999999999999985321  111111    11112111   1111  1112237889999999999


Q ss_pred             CCCCCCHHHHHH
Q 047465           83 ADDRPTVYDVVS   94 (139)
Q Consensus        83 p~~Rps~~~v~~   94 (139)
                      |.+||++.++++
T Consensus       312 P~~R~ta~e~l~  323 (346)
T 4fih_A          312 PAQRATAAELLK  323 (346)
T ss_dssp             TTTSCCHHHHTT
T ss_pred             hhHCcCHHHHhc
Confidence            999999999865

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.31  E-value=2e-12  Score=96.02  Aligned_cols=79  Identities=20%  Similarity=0.237  Sum_probs=55.8

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .+..|+.++||||+||++|||++|+.||....     .......... +..+   .+    +......+.+++.+||+.|
T Consensus       198 ~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-----~~~~~~~i~~-~~~~---~~----~~~~s~~~~~li~~~L~~d  264 (350)
T 4b9d_A          198 ENKPYNNKSDIWALGCVLYELCTLKHAFEAGS-----MKNLVLKIIS-GSFP---PV----SLHYSYDLRSLVSQLFKRN  264 (350)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHH-TCCC---CC----CTTSCHHHHHHHHHHTCSS
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----HHHHHHHHHc-CCCC---CC----CccCCHHHHHHHHHHccCC
Confidence            45678999999999999999999999996321     1122222222 2222   11    2222337899999999999


Q ss_pred             CCCCCCHHHHHH
Q 047465           83 ADDRPTVYDVVS   94 (139)
Q Consensus        83 p~~Rps~~~v~~   94 (139)
                      |.+||++.++++
T Consensus       265 P~~R~s~~e~l~  276 (350)
T 4b9d_A          265 PRDRPSVNSILE  276 (350)
T ss_dssp             GGGSCCHHHHHT
T ss_pred             hhHCcCHHHHhc
Confidence            999999999975

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.30  E-value=2.8e-12  Score=90.56  Aligned_cols=82  Identities=17%  Similarity=0.201  Sum_probs=57.4

Q ss_pred             CccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCCC
Q 047465            8 SIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRP   87 (139)
Q Consensus         8 s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~Rp   87 (139)
                      +.++||||+|+++||+++|+.|+.....     ..........+...   .+    +......+.+++..||+.+|.+||
T Consensus       189 ~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~~p~~Rp  256 (271)
T 3kmu_A          189 RRSADMWSFAVLLWELVTREVPFADLSN-----MEIGMKVALEGLRP---TI----PPGISPHVSKLMKICMNEDPAKRP  256 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHCSCTTTTSCH-----HHHHHHHHHSCCCC---CC----CTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             CchhhHHHHHHHHHHHHhCCCCccccCh-----HHHHHHHHhcCCCC---CC----CCCCCHHHHHHHHHHcCCChhhCc
Confidence            3479999999999999999999863221     11111222222222   11    222334889999999999999999


Q ss_pred             CHHHHHHHHhcccC
Q 047465           88 TVYDVVSMLTNEAT  101 (139)
Q Consensus        88 s~~~v~~~L~~~~~  101 (139)
                      ++.++++.|+.+..
T Consensus       257 s~~~il~~L~~l~~  270 (271)
T 3kmu_A          257 KFDMIVPILEKMQD  270 (271)
T ss_dssp             CHHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHHhhc
Confidence            99999999987643

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.30  E-value=1.5e-12  Score=97.04  Aligned_cols=83  Identities=18%  Similarity=0.178  Sum_probs=59.8

Q ss_pred             CCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +.++.++||||||+++||+++ |+.|+.....  ..    +......+...   ..    |...+..+.+++..||+.+|
T Consensus       290 ~~~~~~~DvwslG~il~el~t~g~~p~~~~~~--~~----~~~~~~~~~~~---~~----~~~~~~~l~~li~~cl~~dP  356 (377)
T 3cbl_A          290 GRYSSESDVWSFGILLWETFSLGASPYPNLSN--QQ----TREFVEKGGRL---PC----PELCPDAVFRLMEQCWAYEP  356 (377)
T ss_dssp             CEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH--HH----HHHHHHTTCCC---CC----CTTCCHHHHHHHHHHTCSSG
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HH----HHHHHHcCCCC---CC----CCCCCHHHHHHHHHHcCCCc
Confidence            457789999999999999998 8888753221  11    11222223222   11    34444588999999999999


Q ss_pred             CCCCCHHHHHHHHhccc
Q 047465           84 DDRPTVYDVVSMLTNEA  100 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~  100 (139)
                      .+||++.+++..|+.+.
T Consensus       357 ~~Rps~~~i~~~L~~i~  373 (377)
T 3cbl_A          357 GQRPSFSTIYQELQSIR  373 (377)
T ss_dssp             GGSCCHHHHHHHHHHHH
T ss_pred             hhCcCHHHHHHHHHHHH
Confidence            99999999999998764

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.29  E-value=5.8e-12  Score=96.06  Aligned_cols=86  Identities=23%  Similarity=0.314  Sum_probs=62.3

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||+++|||++ |+.|+....  .....    ..+..+...     ..  |......+.+++..||+.+
T Consensus       359 ~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~--~~~~~----~~i~~~~~~-----~~--~~~~~~~l~~li~~cl~~d  425 (454)
T 1qcf_A          359 FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--NPEVI----RALERGYRM-----PR--PENCPEELYNIMMRCWKNR  425 (454)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--HHHHH----HHHHHTCCC-----CC--CTTSCHHHHHHHHHHTCSS
T ss_pred             cCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC--HHHHH----HHHHcCCCC-----CC--CCCCCHHHHHHHHHHccCC
Confidence            3568899999999999999999 888885321  11111    112222221     11  3334458999999999999


Q ss_pred             CCCCCCHHHHHHHHhcccCC
Q 047465           83 ADDRPTVYDVVSMLTNEATT  102 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~~  102 (139)
                      |.+||++.+++..|+.....
T Consensus       426 p~~RPt~~~i~~~L~~~~~~  445 (454)
T 1qcf_A          426 PEERPTFEYIQSVLDDFYTA  445 (454)
T ss_dssp             GGGSCCHHHHHHHHHTSSSS
T ss_pred             hhHCcCHHHHHHHHHHHHhc
Confidence            99999999999999988663

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.29  E-value=8.6e-12  Score=91.89  Aligned_cols=95  Identities=15%  Similarity=0.021  Sum_probs=63.2

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCC----CCHHHHHHHHHHhc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHG----IYGRTTGHWTLLCA   79 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~----~~~~~~~~l~~~C~   79 (139)
                      +..++.++||||||+++|||++|+.||................... . ..   .+.+  +.    .....+.+++..||
T Consensus       242 ~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~-~~---~~~~--~~~~~~~~~~~l~~li~~~l  314 (352)
T 2jii_A          242 GCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVD-K-PG---PFVG--PCGHWIRPSETLQKYLKVVM  314 (352)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHH-S-CC---CEEC--TTSCEECCCHHHHHHHHHHH
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccC-C-hh---hhhh--hccccCCCcHHHHHHHHHHH
Confidence            3467889999999999999999999986433211111111111111 1 11   1111  11    11348899999999


Q ss_pred             ccCCCCCCCHHHHHHHHhcccCCCCC
Q 047465           80 QESADDRPTVYDVVSMLTNEATTLNP  105 (139)
Q Consensus        80 ~~~p~~Rps~~~v~~~L~~~~~~~~~  105 (139)
                      +.+|.+||++.+++..|+++......
T Consensus       315 ~~dp~~Rps~~~l~~~L~~~~~~~~~  340 (352)
T 2jii_A          315 ALTYEEKPPYAMLRNNLEALLQDLRV  340 (352)
T ss_dssp             TCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred             hCChhhCCCHHHHHHHHHHHHHhcCC
Confidence            99999999999999999988765543

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.29  E-value=5.7e-12  Score=89.26  Aligned_cols=83  Identities=24%  Similarity=0.289  Sum_probs=57.9

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++||||+|++++++++|+.|+.....     ..............   ..    +......+.+++..||+.+|.
T Consensus       189 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~~p~  256 (271)
T 3dtc_A          189 SMFSKGSDVWSYGVLLWELLTGEVPFRGIDG-----LAVAYGVAMNKLAL---PI----PSTCPEPFAKLMEDCWNPDPH  256 (271)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH-----HHHHHHHHTSCCCC---CC----CTTCCHHHHHHHHHHTCSSGG
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHhhhcCCCCC---CC----CcccCHHHHHHHHHHhcCCcc
Confidence            4578899999999999999999999863221     11111111111111   11    233334789999999999999


Q ss_pred             CCCCHHHHHHHHhcc
Q 047465           85 DRPTVYDVVSMLTNE   99 (139)
Q Consensus        85 ~Rps~~~v~~~L~~~   99 (139)
                      +||++.++++.|+++
T Consensus       257 ~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          257 SRPSFTNILDQLTTI  271 (271)
T ss_dssp             GSCCHHHHHHHHHC-
T ss_pred             cCcCHHHHHHHHhcC
Confidence            999999999999763

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.28  E-value=7.3e-12  Score=89.47  Aligned_cols=85  Identities=18%  Similarity=0.241  Sum_probs=59.1

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++||||+|+++||+++|+.||..............   ...+...   .+    +......+.+++..||+.+|.
T Consensus       203 ~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~---~~~~~~~---~~----~~~~~~~l~~li~~~l~~dp~  272 (287)
T 4f0f_A          203 ESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI---REEGLRP---TI----PEDCPPRLRNVIELCWSGDPK  272 (287)
T ss_dssp             CEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHH---HHSCCCC---CC----CTTSCHHHHHHHHHHTCSSGG
T ss_pred             CCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHH---hccCCCC---CC----CcccCHHHHHHHHHHhcCChh
Confidence            3467899999999999999999999864433221111111   1112111   11    222334789999999999999


Q ss_pred             CCCCHHHHHHHHhcc
Q 047465           85 DRPTVYDVVSMLTNE   99 (139)
Q Consensus        85 ~Rps~~~v~~~L~~~   99 (139)
                      +||++.++++.|+++
T Consensus       273 ~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          273 KRPHFSYIVKELSEL  287 (287)
T ss_dssp             GSCCHHHHHHHHHTC
T ss_pred             hCcCHHHHHHHHHhC
Confidence            999999999999764

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.28  E-value=9.2e-12  Score=89.27  Aligned_cols=90  Identities=12%  Similarity=0.248  Sum_probs=60.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|++++|+++|+.||..... .......    ...+....  .+... .......+.+++..||+.+|
T Consensus       199 ~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-~~~~~~~----~~~~~~~~--~~~~~-~~~~~~~l~~li~~~l~~~p  270 (289)
T 3og7_A          199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINN-RDQIIEM----VGRGSLSP--DLSKV-RSNCPKRMKRLMAECLKKKR  270 (289)
T ss_dssp             -CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC-HHHHHHH----HHHTSCCC--CTTSS-CTTSCHHHHHHHHHHTCSSG
T ss_pred             CCCCCcccchHHHHHHHHHHHHCCCCccccch-HHHHHHH----hcccccCc--chhhc-cccCCHHHHHHHHHHccCCh
Confidence            44577899999999999999999999864322 1111111    11121110  11000 11223378999999999999


Q ss_pred             CCCCCHHHHHHHHhcccC
Q 047465           84 DDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~  101 (139)
                      .+||++.+++..|+++..
T Consensus       271 ~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          271 DERPSFPRILAEIEELAR  288 (289)
T ss_dssp             GGSCCHHHHHHHHHHTTC
T ss_pred             hhCCCHHHHHHHHHHHhh
Confidence            999999999999988754

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.28  E-value=1.4e-12  Score=94.83  Aligned_cols=94  Identities=24%  Similarity=0.459  Sum_probs=62.2

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCC---cCchHHHHHHHHHhhccchhhhhhhhc--cCCCCCH---HHHHHHHH
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYW---TDSLIFVIYYLRVANSHIFLCLWLIIN--LRHGIYG---RTTGHWTL   76 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d--~~p~~~~---~~~~~l~~   76 (139)
                      +.++.++||||+|++++||++|+.||....   ........++..........   .+.+  .++....   ..+.+++.
T Consensus       210 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~li~  286 (326)
T 3uim_A          210 GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE---ALVDVDLQGNYKDEEVEQLIQVAL  286 (326)
T ss_dssp             SEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCST---TSSCTTCTTSCCHHHHHHHHHHHH
T ss_pred             CCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhh---hhcChhhccccCHHHHHHHHHHHH
Confidence            456789999999999999999999985211   11222333433333222222   2222  0011111   27889999


Q ss_pred             HhcccCCCCCCCHHHHHHHHhcccC
Q 047465           77 LCAQESADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        77 ~C~~~~p~~Rps~~~v~~~L~~~~~  101 (139)
                      .||+.+|.+||++.++++.|++...
T Consensus       287 ~cl~~dP~~Rps~~ell~~L~~~~~  311 (326)
T 3uim_A          287 LCTQSSPMERPKMSEVVRMLEGDGL  311 (326)
T ss_dssp             HHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred             HHhCcCCccCCCHHHHHHHhcCcch
Confidence            9999999999999999999987543

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.27  E-value=3.9e-12  Score=91.29  Aligned_cols=90  Identities=16%  Similarity=0.031  Sum_probs=55.3

Q ss_pred             CCccchhhhHhHHHHHHHhC----------CCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhcc-CCCCCHHHHHHHH
Q 047465            7 FSIKSDIFSLGVLMLEILSG----------KKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINL-RHGIYGRTTGHWT   75 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~p~~~~~~~~~l~   75 (139)
                      ++.++||||||+++|||++|          +.||........................   .+... -+......+.+++
T Consensus       200 ~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~li  276 (301)
T 3q4u_A          200 SYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRP---NIPNRWFSDPTLTSLAKLM  276 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCC---CCCGGGGGSHHHHHHHHHH
T ss_pred             CCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCC---CCChhhccCccHHHHHHHH
Confidence            34689999999999999999          6666433222111111111111111111   11000 0011122788999


Q ss_pred             HHhcccCCCCCCCHHHHHHHHhcc
Q 047465           76 LLCAQESADDRPTVYDVVSMLTNE   99 (139)
Q Consensus        76 ~~C~~~~p~~Rps~~~v~~~L~~~   99 (139)
                      ..||+.+|.+||++.++++.|+++
T Consensus       277 ~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          277 KECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             HHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHhhcChhhCCCHHHHHHHHhcc
Confidence            999999999999999999999864

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.27  E-value=5e-12  Score=96.02  Aligned_cols=81  Identities=14%  Similarity=0.130  Sum_probs=55.2

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .+..|+.++||||+||++|||++|+.||....  .....    ..+......   .+..  +......+.+++.+||+.|
T Consensus       320 ~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~~----~~i~~~~~~---~~~~--~~~~s~~~~dli~~~L~~d  388 (423)
T 4fie_A          320 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--PLKAM----KMIRDNLPP---RLKN--LHKVSPSLKGFLDRLLVRD  388 (423)
T ss_dssp             TTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHH----HHHHHSCCC---CCSC--TTSSCHHHHHHHHHHSCSS
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--HHHHH----HHHHcCCCC---CCcc--cccCCHHHHHHHHHHcCCC
Confidence            35578999999999999999999999985321  11111    112122111   1111  2222348899999999999


Q ss_pred             CCCCCCHHHHHH
Q 047465           83 ADDRPTVYDVVS   94 (139)
Q Consensus        83 p~~Rps~~~v~~   94 (139)
                      |.+||++.++++
T Consensus       389 P~~R~ta~ell~  400 (423)
T 4fie_A          389 PAQRATAAELLK  400 (423)
T ss_dssp             TTTSCCHHHHTT
T ss_pred             hhHCcCHHHHhc
Confidence            999999999865

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.26  E-value=3.4e-12  Score=97.30  Aligned_cols=85  Identities=25%  Similarity=0.195  Sum_probs=61.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||+++|||++ |+.|+......  ...    ..+..+...   ..    |...+..+.+++..||+.+
T Consensus       360 ~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~----~~i~~~~~~---~~----p~~~~~~l~~li~~cl~~d  426 (450)
T 1k9a_A          360 EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVV----PRVEKGYKM---DA----PDGCPPAVYDVMKNCWHLD  426 (450)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--THH----HHHHTTCCC---CC----CTTCCHHHHHHHHHHTCSS
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHH----HHHHcCCCC---CC----CCcCCHHHHHHHHHHcCCC
Confidence            4568899999999999999998 89888643221  111    222223222   11    3344458999999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.+++..|+.+..
T Consensus       427 p~~Rpt~~~l~~~L~~i~~  445 (450)
T 1k9a_A          427 AATRPTFLQLREQLEHIRT  445 (450)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             hhHCcCHHHHHHHHHHHHH
Confidence            9999999999999987654

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.26  E-value=2.9e-12  Score=92.66  Aligned_cols=89  Identities=17%  Similarity=0.219  Sum_probs=59.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||||+++||+++|..++...................        ...   +...+..+.+++..||+.+|
T Consensus       196 ~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~--------~~~---~~~~~~~l~~li~~~l~~dP  264 (310)
T 3s95_A          196 GRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD--------RYC---PPNCPPSFFPITVRCCDLDP  264 (310)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH--------HTC---CTTCCTTHHHHHHHHTCSSG
T ss_pred             CCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc--------ccC---CCCCCHHHHHHHHHHccCCh
Confidence            4567889999999999999999998875433221110000111110        000   22222378889999999999


Q ss_pred             CCCCCHHHHHHHHhcccCCC
Q 047465           84 DDRPTVYDVVSMLTNEATTL  103 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~~~  103 (139)
                      .+||++.++++.|+.+...+
T Consensus       265 ~~Rps~~~l~~~L~~l~~~~  284 (310)
T 3s95_A          265 EKRPSFVKLEHWLETLRMHL  284 (310)
T ss_dssp             GGSCCHHHHHHHHHHHHHHH
T ss_pred             hhCcCHHHHHHHHHHHHHhc
Confidence            99999999999999876543

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.25  E-value=1.4e-11  Score=88.67  Aligned_cols=74  Identities=8%  Similarity=0.129  Sum_probs=52.0

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDR   86 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~R   86 (139)
                      ++.++||||+||+++||++|+.||....  .   .... ..+..+..    .+    |...+..+.+++.+|++.||.+|
T Consensus       189 ~~~~~DiwSlGvily~lltg~~PF~~~~--~---~~~~-~~i~~~~~----~~----p~~~s~~~~~li~~~L~~dP~~R  254 (275)
T 3hyh_A          189 AGPEVDVWSCGVILYVMLCRRLPFDDES--I---PVLF-KNISNGVY----TL----PKFLSPGAAGLIKRMLIVNPLNR  254 (275)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSSCCSS--H---HHHH-HHHHHTCC----CC----CTTSCHHHHHHHHHHSCSSGGGS
T ss_pred             CCChhhhHHHHHHHHHHHHCCCCCCCCC--H---HHHH-HHHHcCCC----CC----CCCCCHHHHHHHHHHccCChhHC
Confidence            4679999999999999999999996321  1   1111 11211211    11    22233478899999999999999


Q ss_pred             CCHHHHHH
Q 047465           87 PTVYDVVS   94 (139)
Q Consensus        87 ps~~~v~~   94 (139)
                      |++.++++
T Consensus       255 ~s~~eil~  262 (275)
T 3hyh_A          255 ISIHEIMQ  262 (275)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHc
Confidence            99999986

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.25  E-value=9.5e-12  Score=96.81  Aligned_cols=87  Identities=21%  Similarity=0.254  Sum_probs=62.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||+++|||++ |+.|+....  ...    +...+..+...   ..    +......+.+++..||+.+
T Consensus       438 ~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~--~~~----~~~~i~~~~~~---~~----~~~~~~~l~~li~~cl~~d  504 (535)
T 2h8h_A          438 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMV--NRE----VLDQVERGYRM---PC----PPECPESLHDLMCQCWRKE  504 (535)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC--HHH----HHHHHHTTCCC---CC----CTTCCHHHHHHHHHHTCSS
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--HHH----HHHHHHcCCCC---CC----CCCCCHHHHHHHHHHcCCC
Confidence            3568899999999999999999 888875321  111    11222223222   11    3333447899999999999


Q ss_pred             CCCCCCHHHHHHHHhcccCCC
Q 047465           83 ADDRPTVYDVVSMLTNEATTL  103 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~~~  103 (139)
                      |.+||++.+++..|+......
T Consensus       505 P~~RPt~~~l~~~L~~~~~~~  525 (535)
T 2h8h_A          505 PEERPTFEYLQAFLEDYFTST  525 (535)
T ss_dssp             GGGSCCHHHHHHHHHTSSCCC
T ss_pred             hhHCcCHHHHHHHHHHHhhcc
Confidence            999999999999999876633

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.25  E-value=3.3e-11  Score=87.96  Aligned_cols=93  Identities=12%  Similarity=0.075  Sum_probs=60.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||||++++||++|+.||........  ...... +.........+...  .. .+ .+..++..||+.+|
T Consensus       191 ~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~--~~~~~~-i~~~~~~~~~~~~~--~~-~p-~~~~li~~~l~~~p  263 (330)
T 2izr_A          191 GKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL--KERYQK-IGDTKRATPIEVLC--EN-FP-EMATYLRYVRRLDF  263 (330)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH--HHHHHH-HHHHHHHSCHHHHT--TT-CH-HHHHHHHHHHHCCT
T ss_pred             CCCCCchhHHHHHHHHHHHHhcCCCCccccccccH--HHHHHH-HHhhhccCCHHHHh--cc-Ch-HHHHHHHHHHhCCC
Confidence            34578899999999999999999999965432211  111111 11111100001111  11 22 78899999999999


Q ss_pred             CCCCCHHHHHHHHhcccCCC
Q 047465           84 DDRPTVYDVVSMLTNEATTL  103 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~~~  103 (139)
                      .+||++.++...|+.+....
T Consensus       264 ~~RP~~~~l~~~l~~~~~~~  283 (330)
T 2izr_A          264 FEKPDYDYLRKLFTDLFDRK  283 (330)
T ss_dssp             TCCCCHHHHHHHHHHHHHHT
T ss_pred             CCCCCHHHHHHHHHHHHHHc
Confidence            99999999999988765433

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.24  E-value=4.7e-12  Score=92.50  Aligned_cols=85  Identities=19%  Similarity=0.238  Sum_probs=60.5

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||+++||+++ |+.|+......  ...    .....+...   .  .  +......+..++..||+.+
T Consensus       193 ~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~----~~~~~~~~~---~--~--~~~~~~~~~~li~~~l~~~  259 (327)
T 3poz_A          193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EIS----SILEKGERL---P--Q--PPICTIDVYMIMVKCWMID  259 (327)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHH----HHHHTTCCC---C--C--CTTBCHHHHHHHHHHTCSC
T ss_pred             cCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--HHH----HHHHcCCCC---C--C--CccCCHHHHHHHHHHcCCC
Confidence            4567899999999999999999 89888643221  111    112222211   1  1  3333448899999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.+++..|+.+..
T Consensus       260 p~~Rps~~ell~~l~~~~~  278 (327)
T 3poz_A          260 ADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             GGGSCCHHHHHHHHHHHHT
T ss_pred             hhhCCCHHHHHHHHHHHHh
Confidence            9999999999999987654

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.24  E-value=1.5e-11  Score=88.31  Aligned_cols=91  Identities=15%  Similarity=0.211  Sum_probs=60.1

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcC----------chHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHH
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTD----------SLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHW   74 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l   74 (139)
                      ..++.++||||+|+++||+++|..|+......          ..............+...   .  .  +......+.++
T Consensus       192 ~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~--~~~~~~~l~~l  264 (295)
T 3ugc_A          192 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL---P--R--PDGCPDEIYMI  264 (295)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCC---C--C--CTTCCHHHHHH
T ss_pred             CCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcC---C--C--CcCcCHHHHHH
Confidence            45788999999999999999998886421100          000000111111111111   1  1  33334489999


Q ss_pred             HHHhcccCCCCCCCHHHHHHHHhcccCC
Q 047465           75 TLLCAQESADDRPTVYDVVSMLTNEATT  102 (139)
Q Consensus        75 ~~~C~~~~p~~Rps~~~v~~~L~~~~~~  102 (139)
                      +..||+.+|.+||++.+++..|+.+...
T Consensus       265 i~~~l~~dp~~Rps~~el~~~L~~l~~~  292 (295)
T 3ugc_A          265 MTECWNNNVNQRPSFRDLALRVDQIRDN  292 (295)
T ss_dssp             HHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence            9999999999999999999999887653

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.24  E-value=6.5e-12  Score=93.49  Aligned_cols=85  Identities=21%  Similarity=0.195  Sum_probs=61.0

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||||+++|||++ |+.|+.....  ....    ..+..+...   ..    |......+..++..||+.+
T Consensus       279 ~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~--~~~~----~~~~~~~~~---~~----~~~~~~~l~~li~~~l~~d  345 (370)
T 2psq_A          279 DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELF----KLLKEGHRM---DK----PANCTNELYMMMRDCWHAV  345 (370)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHH----HHHHTTCCC---CC----CTTSCHHHHHHHHHHTCSS
T ss_pred             CCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH--HHHH----HHHhcCCCC---CC----CCCCCHHHHHHHHHHcCCC
Confidence            4568899999999999999999 8888864322  1111    112222222   11    3333448899999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.+++..|+++..
T Consensus       346 P~~Rpt~~ell~~L~~il~  364 (370)
T 2psq_A          346 PSQRPTFKQLVEDLDRILT  364 (370)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             hhhCcCHHHHHHHHHHHHH
Confidence            9999999999999998654

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.24  E-value=5.1e-12  Score=91.81  Aligned_cols=91  Identities=18%  Similarity=0.108  Sum_probs=60.0

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|+++|||++|+.|+.....     ....    .....     ...  +......+..++..||+.+|
T Consensus       227 ~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----~~~~----~~~~~-----~~~--~~~~~~~~~~li~~~l~~~p  290 (337)
T 3ll6_A          227 NFPIGEKQDIWALGCILYLLCFRQHPFEDGAK-----LRIV----NGKYS-----IPP--HDTQYTVFHSLIRAMLQVNP  290 (337)
T ss_dssp             TSCSSHHHHHHHHHHHHHHHHHSSCCC---------------------CC-----CCT--TCCSSGGGHHHHHHHSCSSG
T ss_pred             cCCCChHHhHHHHHHHHHHHHhCCCCCcchhH-----HHhh----cCccc-----CCc--ccccchHHHHHHHHHccCCh
Confidence            44678899999999999999999999853211     0111    11110     100  11122267889999999999


Q ss_pred             CCCCCHHHHHHHHhcccCCCCCCCCCC
Q 047465           84 DDRPTVYDVVSMLTNEATTLNPSNRPA  110 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~~~~~~~~~~  110 (139)
                      .+||++.+++..|+.+...........
T Consensus       291 ~~Rps~~e~l~~l~~~~~~~~~~~~~~  317 (337)
T 3ll6_A          291 EERLSIAEVVHQLQEIAAARNVNPKSP  317 (337)
T ss_dssp             GGSCCHHHHHHHHHHHHHHTTCCTTSC
T ss_pred             hhCcCHHHHHHHHHHHHhccCCCCCcc
Confidence            999999999999998876554443333

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.24  E-value=1.7e-11  Score=88.32  Aligned_cols=90  Identities=20%  Similarity=0.301  Sum_probs=58.9

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhh-ccchhhhhhhhccCCCCC------HHHHHHHHHHh
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVAN-SHIFLCLWLIINLRHGIY------GRTTGHWTLLC   78 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~p~~~------~~~~~~l~~~C   78 (139)
                      .++.++||||+|++++++++|+.|+....... ....+...... .....   ..++  +...      ...+..++..|
T Consensus       210 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~l~~li~~c  283 (307)
T 2nru_A          210 EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDIKEEIEDEEKTIE---DYID--KKMNDADSTSVEAMYSVASQC  283 (307)
T ss_dssp             EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS-BTTHHHHHHHTTSCCHH---HHSC--SSCSCCCHHHHHHHHHHHHHH
T ss_pred             CCCccchhHHHHHHHHHHHHCCCCcccCcchH-HHHHHHHHhhhhhhhhh---hhcc--ccccccchHHHHHHHHHHHHH
Confidence            36789999999999999999999986433221 11111111111 11111   3332  2111      12688899999


Q ss_pred             cccCCCCCCCHHHHHHHHhcccC
Q 047465           79 AQESADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        79 ~~~~p~~Rps~~~v~~~L~~~~~  101 (139)
                      |+.+|.+||++.+++..|+++..
T Consensus       284 l~~~p~~Rps~~~l~~~L~~l~~  306 (307)
T 2nru_A          284 LHEKKNKRPDIKKVQQLLQEMTA  306 (307)
T ss_dssp             TCSSTTTSCCHHHHHHHHHHHC-
T ss_pred             cCCCcccCcCHHHHHHHHHHHhc
Confidence            99999999999999999987643

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.23  E-value=9.4e-12  Score=98.35  Aligned_cols=85  Identities=21%  Similarity=0.095  Sum_probs=62.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||+++|||++ |+.||.....  ..    +...+..+...   ..    |......+.+++..||+.+
T Consensus       513 ~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--~~----~~~~i~~~~~~---~~----p~~~~~~l~~li~~cl~~d  579 (613)
T 2ozo_A          513 FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PE----VMAFIEQGKRM---EC----PPECPPELYALMSDCWIYK  579 (613)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS--HH----HHHHHHTTCCC---CC----CTTCCHHHHHHHHHTTCSS
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH--HH----HHHHHHcCCCC---CC----CCcCCHHHHHHHHHHcCCC
Confidence            3568899999999999999998 9999864322  12    11222333322   11    3334448999999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.+++..|+....
T Consensus       580 P~~RPs~~~l~~~L~~~~~  598 (613)
T 2ozo_A          580 WEDRPDFLTVEQRMRACYY  598 (613)
T ss_dssp             TTTSCCHHHHHHHHHHHHH
T ss_pred             hhHCcCHHHHHHHHHHHHH
Confidence            9999999999999987654

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.23  E-value=1.2e-11  Score=90.36  Aligned_cols=87  Identities=17%  Similarity=0.174  Sum_probs=61.0

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||+++|||++ |+.|+.....  .   . ....+..+...   ..    +......+.+++..||+.+
T Consensus       250 ~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--~---~-~~~~~~~~~~~---~~----~~~~~~~l~~li~~~l~~~  316 (343)
T 1luf_A          250 YNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH--E---E-VIYYVRDGNIL---AC----PENCPLELYNLMRLCWSKL  316 (343)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--H---H-HHHHHHTTCCC---CC----CTTCCHHHHHHHHHHTCSS
T ss_pred             cCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh--H---H-HHHHHhCCCcC---CC----CCCCCHHHHHHHHHHcccC
Confidence            3467889999999999999998 8888753211  1   1 11122222222   11    3333348899999999999


Q ss_pred             CCCCCCHHHHHHHHhcccCCC
Q 047465           83 ADDRPTVYDVVSMLTNEATTL  103 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~~~  103 (139)
                      |.+||++.+++..|+++....
T Consensus       317 p~~Rps~~~~~~~L~~~~~~~  337 (343)
T 1luf_A          317 PADRPSFCSIHRILQRMCERA  337 (343)
T ss_dssp             GGGSCCHHHHHHHHHHTTC--
T ss_pred             cccCCCHHHHHHHHHHHHhhh
Confidence            999999999999999877633

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.23  E-value=1.1e-11  Score=90.37  Aligned_cols=77  Identities=13%  Similarity=0.091  Sum_probs=52.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..|+.++||||+||++|||++|+.||.....     ......... +..    .+    |...+..+.+++.+||+.||
T Consensus       200 ~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-----~~~~~~i~~-~~~----~~----p~~~s~~~~~li~~~L~~dP  265 (304)
T 3ubd_A          200 RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR-----KETMTMILK-AKL----GM----PQFLSPEAQSLLRMLFKRNP  265 (304)
T ss_dssp             TSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHH-CCC----CC----CTTSCHHHHHHHHHHTCSSG
T ss_pred             cCCCCCCCcccchHHHHHHHHhCCCCCCCcCH-----HHHHHHHHc-CCC----CC----CCcCCHHHHHHHHHHcccCH
Confidence            45688999999999999999999999963211     111112221 111    11    33334488999999999999


Q ss_pred             CCCCCH-----HHHHH
Q 047465           84 DDRPTV-----YDVVS   94 (139)
Q Consensus        84 ~~Rps~-----~~v~~   94 (139)
                      .+||++     .+++.
T Consensus       266 ~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          266 ANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             GGSTTCSTTTHHHHHT
T ss_pred             HHCCCCCcCCHHHHHc
Confidence            999984     56653

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.23  E-value=2.2e-11  Score=93.87  Aligned_cols=90  Identities=13%  Similarity=0.038  Sum_probs=59.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcC-chHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTD-SLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||||+++|||++|+.||...... .......+..........   .+.    ......+.+++..||+.+
T Consensus       187 ~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~---~l~----~~~p~~l~~li~~cl~~d  259 (483)
T 3sv0_A          187 GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIE---ALC----RGYPTEFASYFHYCRSLR  259 (483)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHH---HHH----TTSCHHHHHHHHHHHTCC
T ss_pred             CCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHH---HHh----cCCcHHHHHHHHHHhcCC
Confidence            445788999999999999999999999654332 111111111111001111   111    112237899999999999


Q ss_pred             CCCCCCHHHHHHHHhccc
Q 047465           83 ADDRPTVYDVVSMLTNEA  100 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~  100 (139)
                      |.+||++.+++..|+.+.
T Consensus       260 P~~RPs~~el~~~L~~l~  277 (483)
T 3sv0_A          260 FDDKPDYSYLKRLFRDLF  277 (483)
T ss_dssp             TTCCCCHHHHHHHHHHHH
T ss_pred             hhhCcCHHHHHHHHHHHH
Confidence            999999999999887763

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.23  E-value=1.1e-11  Score=92.35  Aligned_cols=87  Identities=17%  Similarity=0.169  Sum_probs=62.3

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||||++++|+++ |+.|+.....  .   . ....+..+...   ..    +......+..++..||+.+
T Consensus       267 ~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~--~---~-~~~~~~~~~~~---~~----~~~~~~~l~~li~~~l~~d  333 (382)
T 3tt0_A          267 DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--E---E-LFKLLKEGHRM---DK----PSNCTNELYMMMRDCWHAV  333 (382)
T ss_dssp             SCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--H---H-HHHHHHTTCCC---CC----CSSCCHHHHHHHHHHTCSS
T ss_pred             CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--H---H-HHHHHHcCCCC---CC----CccCCHHHHHHHHHHcCCC
Confidence            4567889999999999999999 8888753221  1   1 11222222222   11    3333448899999999999


Q ss_pred             CCCCCCHHHHHHHHhcccCCC
Q 047465           83 ADDRPTVYDVVSMLTNEATTL  103 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~~~  103 (139)
                      |.+||++.+++..|+.+....
T Consensus       334 P~~Rps~~ell~~L~~~~~~~  354 (382)
T 3tt0_A          334 PSQRPTFKQLVEDLDRIVALT  354 (382)
T ss_dssp             GGGSCCHHHHHHHHHHHHHHS
T ss_pred             hhhCcCHHHHHHHHHHHHHHH
Confidence            999999999999999887644

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.23  E-value=6e-12  Score=92.58  Aligned_cols=86  Identities=26%  Similarity=0.292  Sum_probs=60.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||+|++++||++ |+.|+...... ..    .......+...   ..    +......+.+++..||+.+
T Consensus       269 ~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~----~~~~~~~~~~~---~~----~~~~~~~l~~li~~~l~~d  336 (359)
T 3vhe_A          269 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EE----FCRRLKEGTRM---RA----PDYTTPEMYQTMLDCWHGE  336 (359)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-HH----HHHHHHHTCCC---CC----CTTCCHHHHHHHHHHTCSS
T ss_pred             CCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh-HH----HHHHHHcCCCC---CC----CCCCCHHHHHHHHHHccCC
Confidence            3567889999999999999998 99888643221 11    11112222211   11    3333448899999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.+++..|+.+..
T Consensus       337 P~~Rps~~ell~~L~~~~~  355 (359)
T 3vhe_A          337 PSQRPTFSELVEHLGNLLQ  355 (359)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             hhhCCCHHHHHHHHHHHHH
Confidence            9999999999999987654

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.22  E-value=1e-11  Score=90.59  Aligned_cols=94  Identities=13%  Similarity=-0.007  Sum_probs=57.4

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcC-chH----------HHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHH
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTD-SLI----------FVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHW   74 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~-~~~----------~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l   74 (139)
                      .++.++||||||+++|||++|+.||...... ...          ..............+.+.....  +......+.++
T Consensus       214 ~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~l  291 (322)
T 3soc_A          214 DAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQ--KHAGMAMLCET  291 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGG--SSHHHHHHHHH
T ss_pred             CCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCcccccc--ccchHHHHHHH
Confidence            3456789999999999999999998543221 111          1111111111111110001111  11111258899


Q ss_pred             HHHhcccCCCCCCCHHHHHHHHhcccC
Q 047465           75 TLLCAQESADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        75 ~~~C~~~~p~~Rps~~~v~~~L~~~~~  101 (139)
                      +..||+.+|.+||++.++++.|+++..
T Consensus       292 i~~cl~~dP~~Rps~~ell~~L~~l~~  318 (322)
T 3soc_A          292 IEECWDHDAEARLSAGCVGERITQMQR  318 (322)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            999999999999999999999987654

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.22  E-value=5.9e-12  Score=91.16  Aligned_cols=87  Identities=11%  Similarity=0.145  Sum_probs=58.9

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDR   86 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~R   86 (139)
                      ++.++||||||+++||+++|+.|+...........    .......     ....  +......+.+++..||+.+|.+|
T Consensus       223 ~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~----~~~~~~~-----~~~~--~~~~~~~l~~li~~~l~~dp~~R  291 (317)
T 2buj_A          223 IDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVA----LAVQNQL-----SIPQ--SPRHSSALWQLLNSMMTVDPHQR  291 (317)
T ss_dssp             ECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHH----HHHHCC-------CCC--CTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             CCchhhHHHHHHHHHHHHhCCCChhhhhcccchhh----HHhhccC-----CCCc--cccCCHHHHHHHHHHhhcChhhC
Confidence            57899999999999999999999843111000111    1111111     1111  22223378999999999999999


Q ss_pred             CCHHHHHHHHhcccCCCC
Q 047465           87 PTVYDVVSMLTNEATTLN  104 (139)
Q Consensus        87 ps~~~v~~~L~~~~~~~~  104 (139)
                      |++.+++..|+.+....+
T Consensus       292 ps~~~ll~~L~~~~~~~~  309 (317)
T 2buj_A          292 PHIPLLLSQLEALQPPAP  309 (317)
T ss_dssp             CCHHHHHHHHHHTCCCCC
T ss_pred             CCHHHHHHHhhhcCCCCC
Confidence            999999999998876443

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.22  E-value=5.1e-12  Score=92.16  Aligned_cols=84  Identities=19%  Similarity=0.171  Sum_probs=59.5

Q ss_pred             CCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +.++.++||||+|+++||+++ |+.|+.....  .....    .+..+...   ..    +......+..++..||+.+|
T Consensus       192 ~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~----~~~~~~~~---~~----~~~~~~~~~~li~~~l~~dp  258 (325)
T 3kex_A          192 GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL--AEVPD----LLEKGERL---AQ----PQICTIDVYMVMVKCWMIDE  258 (325)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT--THHHH----HHHTTCBC---CC----CTTBCTTTTHHHHHHTCSCT
T ss_pred             CCCChhhHhHHhHHHHHHHHhCCCCCccccCH--HHHHH----HHHcCCCC---CC----CCcCcHHHHHHHHHHcCCCh
Confidence            567889999999999999999 9999864322  11111    12222211   11    22223367889999999999


Q ss_pred             CCCCCHHHHHHHHhcccC
Q 047465           84 DDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~  101 (139)
                      .+||++.+++..|+.+..
T Consensus       259 ~~Rps~~el~~~l~~~~~  276 (325)
T 3kex_A          259 NIRPTFKELANEFTRMAR  276 (325)
T ss_dssp             TTSCCHHHHHHHHHHHTT
T ss_pred             hhCcCHHHHHHHHHHHHh
Confidence            999999999999988755

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.21  E-value=8.8e-12  Score=96.15  Aligned_cols=84  Identities=20%  Similarity=0.184  Sum_probs=60.4

Q ss_pred             CCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +.++.++||||||+++|||++ |+.|+.....  ....    ..+..+...   ..    |......+.+++..||+.+|
T Consensus       394 ~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~--~~~~----~~~~~~~~~---~~----~~~~~~~l~~li~~cl~~dP  460 (495)
T 1opk_A          394 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVY----ELLEKDYRM---ER----PEGCPEKVYELMRACWQWNP  460 (495)
T ss_dssp             CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHH----HHHHTTCCC---CC----CTTCCHHHHHHHHHHTCSSG
T ss_pred             CCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH--HHHH----HHHHcCCCC---CC----CCCCCHHHHHHHHHHcCcCh
Confidence            457889999999999999999 8888754321  1111    222222222   11    33344488999999999999


Q ss_pred             CCCCCHHHHHHHHhcccC
Q 047465           84 DDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~  101 (139)
                      .+||++.+++..|+.+..
T Consensus       461 ~~RPs~~el~~~L~~~~~  478 (495)
T 1opk_A          461 SDRPSFAEIHQAFETMFQ  478 (495)
T ss_dssp             GGSCCHHHHHHHHHTSCS
T ss_pred             hHCcCHHHHHHHHHHHHh
Confidence            999999999999998754

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.21  E-value=1.7e-11  Score=86.75  Aligned_cols=83  Identities=24%  Similarity=0.314  Sum_probs=59.4

Q ss_pred             CCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      .++.++||||+|++++++++ |+.|+.....  .   ... .....+...     ..  +......+.+++..||+.+|.
T Consensus       181 ~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~---~~~-~~~~~~~~~-----~~--~~~~~~~l~~li~~~l~~~p~  247 (268)
T 3sxs_A          181 KYSSKSDVWAFGILMWEVFSLGKMPYDLYTN--S---EVV-LKVSQGHRL-----YR--PHLASDTIYQIMYSCWHELPE  247 (268)
T ss_dssp             EEETTHHHHHHHHHHHHHHTTTCCTTTTSCH--H---HHH-HHHHTTCCC-----CC--CTTSCHHHHHHHHHTTCSSGG
T ss_pred             CCchhhhhHHHHHHHHHHHcCCCCCccccCh--H---HHH-HHHHcCCCC-----CC--CCcChHHHHHHHHHHcCCChh
Confidence            46789999999999999998 8888853221  1   111 111122211     11  434445889999999999999


Q ss_pred             CCCCHHHHHHHHhcccC
Q 047465           85 DRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        85 ~Rps~~~v~~~L~~~~~  101 (139)
                      +||++.++++.|+.+..
T Consensus       248 ~Rps~~~ll~~L~~l~~  264 (268)
T 3sxs_A          248 KRPTFQQLLSSIEPLRE  264 (268)
T ss_dssp             GSCCHHHHHHHHGGGCC
T ss_pred             hCcCHHHHHHHHHHhhh
Confidence            99999999999998765

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.21  E-value=1e-11  Score=90.78  Aligned_cols=85  Identities=22%  Similarity=0.240  Sum_probs=60.4

Q ss_pred             CCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ..++.++||||+|+++||+++ |+.|+.....  ..    ....+..+...   .  .  +......+.+++..||+.+|
T Consensus       229 ~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~----~~~~~~~~~~~---~--~--~~~~~~~l~~li~~~l~~dp  295 (325)
T 3kul_A          229 RTFSSASDVWSFGVVMWEVLAYGERPYWNMTN--RD----VISSVEEGYRL---P--A--PMGCPHALHQLMLDCWHKDR  295 (325)
T ss_dssp             CEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH--HH----HHHHHHTTCCC---C--C--CTTCCHHHHHHHHHHTCSSG
T ss_pred             CCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH--HH----HHHHHHcCCCC---C--C--CCCcCHHHHHHHHHHccCCh
Confidence            456789999999999999999 8888853211  11    11112222211   1  1  33333488999999999999


Q ss_pred             CCCCCHHHHHHHHhcccCC
Q 047465           84 DDRPTVYDVVSMLTNEATT  102 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~~  102 (139)
                      .+||++.+++..|+.+...
T Consensus       296 ~~Rps~~eil~~L~~l~~~  314 (325)
T 3kul_A          296 AQRPRFSQIVSVLDALIRS  314 (325)
T ss_dssp             GGSCCHHHHHHHHHHHHHS
T ss_pred             hhCcCHHHHHHHHHHHHhC
Confidence            9999999999999988763

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.20  E-value=1.7e-11  Score=91.13  Aligned_cols=85  Identities=24%  Similarity=0.227  Sum_probs=59.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||++++||++ |..|+....  ...    ....+..+...   ..    +......+.+++..||+.+
T Consensus       260 ~~~~~~~~DvwslG~il~ellt~g~~pf~~~~--~~~----~~~~i~~~~~~---~~----~~~~~~~l~~li~~~l~~d  326 (367)
T 3l9p_A          260 EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS--NQE----VLEFVTSGGRM---DP----PKNCPGPVYRIMTQCWQHQ  326 (367)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--HHH----HHHHHHTTCCC---CC----CTTCCHHHHHHHHHHTCSS
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC--HHH----HHHHHHcCCCC---CC----CccCCHHHHHHHHHHcCCC
Confidence            4567899999999999999998 888875321  111    11122222221   11    2333347899999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.++++.|+....
T Consensus       327 P~~Rps~~eil~~l~~~~~  345 (367)
T 3l9p_A          327 PEDRPNFAIILERIEYCTQ  345 (367)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             HhHCcCHHHHHHHHHHHhh
Confidence            9999999999999987655

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.20  E-value=3.2e-11  Score=88.35  Aligned_cols=85  Identities=21%  Similarity=0.270  Sum_probs=60.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||+|+++||+++ |+.|+.....  ..    +...+..+...   .  .  +......+.+++..||+.+
T Consensus       224 ~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--~~----~~~~~~~~~~~---~--~--~~~~~~~l~~li~~~l~~~  290 (333)
T 1mqb_A          224 YRKFTSASDVWSFGIVMWEVMTYGERPYWELSN--HE----VMKAINDGFRL---P--T--PMDCPSAIYQLMMQCWQQE  290 (333)
T ss_dssp             SCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HH----HHHHHHTTCCC---C--C--CTTCBHHHHHHHHHHTCSS
T ss_pred             cCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH--HH----HHHHHHCCCcC---C--C--cccCCHHHHHHHHHHcCCC
Confidence            3567889999999999999998 8888853211  11    11222222211   1  1  2233347899999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.+++..|+++..
T Consensus       291 p~~Rps~~~l~~~L~~~~~  309 (333)
T 1mqb_A          291 RARRPKFADIVSILDKLIR  309 (333)
T ss_dssp             TTTSCCHHHHHHHHHHHHH
T ss_pred             hhhCcCHHHHHHHHHHHHh
Confidence            9999999999999987765

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.20  E-value=2.6e-11  Score=86.88  Aligned_cols=89  Identities=19%  Similarity=0.171  Sum_probs=60.5

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|++++++++|..|+..... .......    ...+...   .  .  +......+.+++..||+.+|
T Consensus       202 ~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~-~~~~~~~----~~~~~~~---~--~--~~~~~~~l~~li~~~l~~~p  269 (298)
T 3pls_A          202 TYRFTTKSDVWSFGVLLWELLTRGAPPYRHID-PFDLTHF----LAQGRRL---P--Q--PEYCPDSLYQVMQQCWEADP  269 (298)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-GGGHHHH----HHTTCCC---C--C--CTTCCHHHHHHHHHHTCSSG
T ss_pred             cCCCChhhchhhHHHHHHHHhhCCCCCCccCC-HHHHHHH----hhcCCCC---C--C--CccchHHHHHHHHHHccCCh
Confidence            44678899999999999999997666432111 1111111    1112111   1  1  33333478999999999999


Q ss_pred             CCCCCHHHHHHHHhcccCCCC
Q 047465           84 DDRPTVYDVVSMLTNEATTLN  104 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~~~~  104 (139)
                      .+||++.+++..|+++...+.
T Consensus       270 ~~Rps~~~ll~~l~~~~~~l~  290 (298)
T 3pls_A          270 AVRPTFRVLVGEVEQIVSALL  290 (298)
T ss_dssp             GGSCCHHHHHHHHHHHHHHCC
T ss_pred             hhCcCHHHHHHHHHHHHHHHh
Confidence            999999999999998766554

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.20  E-value=2.7e-11  Score=88.15  Aligned_cols=90  Identities=12%  Similarity=0.080  Sum_probs=54.3

Q ss_pred             cchhhhHhHHHHHHHhC----------CCCCCcCCcCchHHHHHHHHHhhccc-hhhhhhhhccCCCCCHHHHHHHHHHh
Q 047465           10 KSDIFSLGVLMLEILSG----------KKNTEFYWTDSLIFVIYYLRVANSHI-FLCLWLIINLRHGIYGRTTGHWTLLC   78 (139)
Q Consensus        10 k~Dv~s~G~~l~ei~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~p~~~~~~~~~l~~~C   78 (139)
                      ++||||||+++|||++|          +.|+............ ......... ...++....  +......+.+++..|
T Consensus       232 ~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~  308 (337)
T 3mdy_A          232 MADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYED-MREIVCIKKLRPSFPNRWS--SDECLRQMGKLMTEC  308 (337)
T ss_dssp             HHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHH-HHHHHTTSCCCCCCCGGGG--GSHHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhh-hHHHHhhhccCccccccch--hhHHHHHHHHHHHHh
Confidence            48999999999999999          5555332221111111 111111111 110000000  111122688999999


Q ss_pred             cccCCCCCCCHHHHHHHHhcccCC
Q 047465           79 AQESADDRPTVYDVVSMLTNEATT  102 (139)
Q Consensus        79 ~~~~p~~Rps~~~v~~~L~~~~~~  102 (139)
                      |+.+|.+||++.++++.|+++...
T Consensus       309 l~~dP~~Rps~~ell~~L~~l~~~  332 (337)
T 3mdy_A          309 WAHNPASRLTALRVKKTLAKMSES  332 (337)
T ss_dssp             SCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             hhhChhhCCCHHHHHHHHHHHHhh
Confidence            999999999999999999987663

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.20  E-value=1.7e-11  Score=87.95  Aligned_cols=83  Identities=27%  Similarity=0.181  Sum_probs=58.7

Q ss_pred             CCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      .++.++||||+|++++++++ |+.|+.....  ..    +......+...   ..    +......+.+++..||+.+|.
T Consensus       196 ~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~----~~~~~~~~~~~---~~----~~~~~~~l~~li~~~l~~dp~  262 (291)
T 1xbb_A          196 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--SE----VTAMLEKGERM---GC----PAGCPREMYDLMNLCWTYDVE  262 (291)
T ss_dssp             EEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HH----HHHHHHTTCCC---CC----CTTCCHHHHHHHHHHTCSSTT
T ss_pred             CCChhhhHHHHHHHHHHHHhcCCCCCCCCCH--HH----HHHHHHcCCCC---CC----CCCCCHHHHHHHHHHcCCChh
Confidence            45678999999999999999 9988853221  11    11222222222   11    222334889999999999999


Q ss_pred             CCCCHHHHHHHHhcccC
Q 047465           85 DRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        85 ~Rps~~~v~~~L~~~~~  101 (139)
                      +||++.+++..|++...
T Consensus       263 ~Rps~~~l~~~L~~~~~  279 (291)
T 1xbb_A          263 NRPGFAAVELRLRNYYY  279 (291)
T ss_dssp             TSCCHHHHHHHHHHHHH
T ss_pred             hCcCHHHHHHHHHHHHH
Confidence            99999999999987654

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.20  E-value=1.2e-11  Score=90.49  Aligned_cols=88  Identities=20%  Similarity=0.246  Sum_probs=60.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||++++||++ |+.|+..... ...    .......+...   ..    +......+..++..||+.+
T Consensus       248 ~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-~~~----~~~~~~~~~~~---~~----~~~~~~~l~~li~~~l~~d  315 (344)
T 1rjb_A          248 EGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV-DAN----FYKLIQNGFKM---DQ----PFYATEEIYIIMQSCWAFD  315 (344)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC-SHH----HHHHHHTTCCC---CC----CTTCCHHHHHHHHHHTCSS
T ss_pred             cCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc-HHH----HHHHHhcCCCC---CC----CCCCCHHHHHHHHHHcCCC
Confidence            3567889999999999999998 8888854322 111    11222222211   11    3333448899999999999


Q ss_pred             CCCCCCHHHHHHHHhcccCCC
Q 047465           83 ADDRPTVYDVVSMLTNEATTL  103 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~~~  103 (139)
                      |.+||++.+++..|+......
T Consensus       316 p~~Rps~~~l~~~l~~~~~~~  336 (344)
T 1rjb_A          316 SRKRPSFPNLTSFLGCQLADA  336 (344)
T ss_dssp             GGGSCCHHHHHHHHHHHC---
T ss_pred             chhCcCHHHHHHHHHHHHHHH
Confidence            999999999999999876643

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.19  E-value=1.6e-11  Score=91.44  Aligned_cols=85  Identities=20%  Similarity=0.234  Sum_probs=58.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||+++||+++ |+.|+....  ...    +...+..+...   .  .  +......+.+++..||+.+
T Consensus       224 ~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~--~~~----~~~~i~~~~~~---~--~--~~~~~~~l~~li~~cl~~d  290 (373)
T 2qol_A          224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMS--NQD----VIKAVDEGYRL---P--P--PMDCPAALYQLMLDCWQKD  290 (373)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC--HHH----HHHHHHTTEEC---C--C--CTTCBHHHHHHHHHHTCSS
T ss_pred             cCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC--HHH----HHHHHHcCCCC---C--C--CccccHHHHHHHHHHhCcC
Confidence            3567889999999999999998 888885321  111    11222222211   1  1  2233348899999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.+++..|+++..
T Consensus       291 p~~RPs~~~i~~~L~~~~~  309 (373)
T 2qol_A          291 RNNRPKFEQIVSILDKLIR  309 (373)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             hhhCcCHHHHHHHHHHHHh
Confidence            9999999999999987654

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.19  E-value=2.6e-11  Score=85.93  Aligned_cols=84  Identities=25%  Similarity=0.290  Sum_probs=59.8

Q ss_pred             CCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ..++.++||||+|++++++++ |+.|+.....  .   ... .....+..     ...  +......+.+++..||+.+|
T Consensus       182 ~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~--~---~~~-~~~~~~~~-----~~~--~~~~~~~~~~li~~~l~~~p  248 (269)
T 4hcu_A          182 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--S---EVV-EDISTGFR-----LYK--PRLASTHVYQIMNHCWRERP  248 (269)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--H---HHH-HHHHTTCC-----CCC--CTTSCHHHHHHHHHHTCSSG
T ss_pred             CCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH--H---HHH-HHHhcCcc-----CCC--CCcCCHHHHHHHHHHccCCc
Confidence            467889999999999999999 8888753211  1   111 11222211     111  44444588999999999999


Q ss_pred             CCCCCHHHHHHHHhcccC
Q 047465           84 DDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~  101 (139)
                      .+||++.++++.|+++..
T Consensus       249 ~~Rps~~~ll~~l~~l~~  266 (269)
T 4hcu_A          249 EDRPAFSRLLRQLAEIAE  266 (269)
T ss_dssp             GGSCCHHHHHHHHHHHHH
T ss_pred             ccCcCHHHHHHHHHHHHH
Confidence            999999999999987654

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.19  E-value=2.6e-11  Score=96.27  Aligned_cols=84  Identities=26%  Similarity=0.160  Sum_probs=60.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||||+++|||++ |+.||.....  ..    +...+..+...   ..    |......+.+++..||+.+
T Consensus       546 ~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--~~----~~~~i~~~~~~---~~----p~~~~~~l~~li~~cl~~d  612 (635)
T 4fl3_A          546 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--SE----VTAMLEKGERM---GC----PAGCPREMYDLMNLCWTYD  612 (635)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HH----HHHHHHTTCCC---CC----CTTCCHHHHHHHHHHTCSS
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--HH----HHHHHHcCCCC---CC----CCCCCHHHHHHHHHHcCCC
Confidence            3468899999999999999998 9999853221  11    22222233322   11    3334458999999999999


Q ss_pred             CCCCCCHHHHHHHHhccc
Q 047465           83 ADDRPTVYDVVSMLTNEA  100 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~  100 (139)
                      |.+||++.+++..|++..
T Consensus       613 P~~RPs~~~l~~~L~~~~  630 (635)
T 4fl3_A          613 VENRPGFAAVELRLRNYY  630 (635)
T ss_dssp             TTTSCCHHHHHHHHHHHH
T ss_pred             HhHCcCHHHHHHHHHHHH
Confidence            999999999999998653

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.19  E-value=1.6e-11  Score=88.67  Aligned_cols=92  Identities=17%  Similarity=0.193  Sum_probs=61.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ++.++.++||||||++++++++|+.|+.....   ...... .........   ...   +......+..++..||+.+|
T Consensus       210 ~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~-~~~~~~~~~---~~~---~~~~~~~l~~li~~~l~~dp  279 (310)
T 2wqm_A          210 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYSLC-KKIEQCDYP---PLP---SDHYSEELRQLVNMCINPDP  279 (310)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCTTC---C---CHHHHH-HHHHTTCSC---CCC---TTTSCHHHHHHHHHHTCSSG
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCcccch---hHHHHH-HHhhcccCC---CCc---ccccCHHHHHHHHHHcCCCh
Confidence            45678899999999999999999999853211   111111 112222221   111   12223378999999999999


Q ss_pred             CCCCCHHHHHHHHhcccCCCCC
Q 047465           84 DDRPTVYDVVSMLTNEATTLNP  105 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~~~~~  105 (139)
                      .+||++.+++..|+++......
T Consensus       280 ~~Rps~~~il~~l~~l~~~~~~  301 (310)
T 2wqm_A          280 EKRPDVTYVYDVAKRMHACTAS  301 (310)
T ss_dssp             GGSCCHHHHHHHHHHHHHHHC-
T ss_pred             hhCCCHHHHHHHHHHHHHhhhh
Confidence            9999999999999988764433

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.19  E-value=2.9e-11  Score=87.14  Aligned_cols=86  Identities=16%  Similarity=0.257  Sum_probs=59.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||+|++++||++ |+.|+..... ......    ....+...     ..  +......+.+++..||+.+
T Consensus       221 ~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-~~~~~~----~~~~~~~~-----~~--~~~~~~~l~~li~~~l~~d  288 (313)
T 1t46_A          221 NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV-DSKFYK----MIKEGFRM-----LS--PEHAPAEMYDIMKTCWDAD  288 (313)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS-SHHHHH----HHHHTCCC-----CC--CTTSCHHHHHHHHHHTCSS
T ss_pred             CCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc-hhHHHH----HhccCCCC-----CC--cccCCHHHHHHHHHHcCCC
Confidence            3457889999999999999998 8888754322 111111    11111111     11  2223348899999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.++++.|++...
T Consensus       289 p~~Rps~~ell~~L~~~~~  307 (313)
T 1t46_A          289 PLKRPTFKQIVQLIEKQIS  307 (313)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             chhCcCHHHHHHHHHHHHH
Confidence            9999999999999987654

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.19  E-value=1.6e-11  Score=88.66  Aligned_cols=86  Identities=26%  Similarity=0.289  Sum_probs=60.2

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||+|++++|+++ |+.|+..... .....    .....+...   ..    +......+..++..||+.+
T Consensus       224 ~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-~~~~~----~~~~~~~~~---~~----~~~~~~~l~~li~~~l~~d  291 (316)
T 2xir_A          224 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFC----RRLKEGTRM---RA----PDYTTPEMYQTMLDCWHGE  291 (316)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC-SHHHH----HHHHHTCCC---CC----CTTCCHHHHHHHHHHTCSS
T ss_pred             cccccchhHHHHHHHHHHHHHhCCCCCCcccch-hHHHH----HHhccCccC---CC----CCCCCHHHHHHHHHHcCCC
Confidence            3457889999999999999998 8888854322 11111    112122211   11    2233347899999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.+++..|+.+..
T Consensus       292 p~~Rps~~ell~~L~~~~~  310 (316)
T 2xir_A          292 PSQRPTFSELVEHLGNLLQ  310 (316)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             hhhCcCHHHHHHHHHHHHh
Confidence            9999999999999987654

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.19  E-value=2.1e-11  Score=88.17  Aligned_cols=87  Identities=22%  Similarity=0.138  Sum_probs=60.2

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||||+++++|++ |..|+.....  ......    ...+...   ..    +......+.+++..||+.+
T Consensus       223 ~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~----~~~~~~~---~~----~~~~~~~l~~li~~~l~~d  289 (313)
T 3brb_A          223 DRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN--HEMYDY----LLHGHRL---KQ----PEDCLDELYEIMYSCWRTD  289 (313)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHH----HHTTCCC---CC----BTTCCHHHHHHHHHTTCSS
T ss_pred             CCCccchhhhHHHHHHHHHHHhcCCCCCccCCH--HHHHHH----HHcCCCC---CC----CccccHHHHHHHHHHcCCC
Confidence            3457889999999999999999 7777753322  111111    1112111   11    2222337899999999999


Q ss_pred             CCCCCCHHHHHHHHhcccCCC
Q 047465           83 ADDRPTVYDVVSMLTNEATTL  103 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~~~  103 (139)
                      |.+||++.+++..|+++...+
T Consensus       290 p~~Rps~~~l~~~L~~l~~~l  310 (313)
T 3brb_A          290 PLDRPTFSVLRLQLEKLLESL  310 (313)
T ss_dssp             GGGSCCHHHHHHHHHHHHHHC
T ss_pred             hhhCcCHHHHHHHHHHHHHhc
Confidence            999999999999999876544

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.18  E-value=3e-11  Score=85.29  Aligned_cols=84  Identities=26%  Similarity=0.296  Sum_probs=59.2

Q ss_pred             CCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ..++.++||||+|++++++++ |+.|+....  ..   ... ..+..+...     ..  +......+.+++..||+.+|
T Consensus       180 ~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--~~---~~~-~~i~~~~~~-----~~--~~~~~~~l~~li~~~l~~~p  246 (267)
T 3t9t_A          180 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRS--NS---EVV-EDISTGFRL-----YK--PRLASTHVYQIMNHCWRERP  246 (267)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--HH---HHH-HHHHTTCCC-----CC--CTTSCHHHHHHHHHHTCSSG
T ss_pred             CCccchhchhhhHHHHHHHhccCCCCCCCCC--HH---HHH-HHHhcCCcC-----CC--CccCcHHHHHHHHHHccCCh
Confidence            457889999999999999999 788875321  11   111 112222111     11  33344488999999999999


Q ss_pred             CCCCCHHHHHHHHhcccC
Q 047465           84 DDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~  101 (139)
                      .+||++.+++..|+++..
T Consensus       247 ~~Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          247 EDRPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             GGSCCHHHHHHHHHHHHH
T ss_pred             hhCcCHHHHHHHHHHHHh
Confidence            999999999999987653

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.18  E-value=4.1e-11  Score=89.38  Aligned_cols=88  Identities=24%  Similarity=0.286  Sum_probs=61.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||+++||+++ +..|+.......  ....    ...+...     ..  |......+.+++..||+.+
T Consensus       270 ~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--~~~~----~~~~~~~-----~~--p~~~~~~l~~li~~cl~~d  336 (373)
T 3c1x_A          270 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVY----LLQGRRL-----LQ--PEYCPDPLYEVMLKCWHPK  336 (373)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--HHHH----HHTTCCC-----CC--CTTCCHHHHHHHHHHTCSS
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--HHHH----HHcCCCC-----CC--CCCCCHHHHHHHHHHcCCC
Confidence            3567889999999999999999 555654322211  1111    1122211     11  3334448899999999999


Q ss_pred             CCCCCCHHHHHHHHhcccCCCC
Q 047465           83 ADDRPTVYDVVSMLTNEATTLN  104 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~~~~  104 (139)
                      |.+||++.+++..|+.+...+.
T Consensus       337 p~~RPs~~ell~~L~~i~~~~~  358 (373)
T 3c1x_A          337 AEMRPSFSELVSRISAIFSTFI  358 (373)
T ss_dssp             GGGSCCHHHHHHHHHHHHHTCC
T ss_pred             hhhCcCHHHHHHHHHHHHHhcc
Confidence            9999999999999998876554

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.18  E-value=2.8e-11  Score=88.19  Aligned_cols=84  Identities=21%  Similarity=0.314  Sum_probs=58.8

Q ss_pred             CCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +.++.++||||||++++||++ |..|+..... ......    ....+...     ..  +......+..++..||+.+|
T Consensus       241 ~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-~~~~~~----~~~~~~~~-----~~--~~~~~~~l~~li~~~l~~~p  308 (333)
T 2i1m_A          241 CVYTVQSDVWSYGILLWEIFSLGLNPYPGILV-NSKFYK----LVKDGYQM-----AQ--PAFAPKNIYSIMQACWALEP  308 (333)
T ss_dssp             CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCS-SHHHHH----HHHHTCCC-----CC--CTTCCHHHHHHHHHHTCSSG
T ss_pred             CCCChHHHHHHHHHHHHHHHcCCCCCCcccch-hHHHHH----HHhcCCCC-----CC--CCCCCHHHHHHHHHHhccCh
Confidence            457889999999999999998 8888754322 111111    11111111     11  33334488999999999999


Q ss_pred             CCCCCHHHHHHHHhccc
Q 047465           84 DDRPTVYDVVSMLTNEA  100 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~  100 (139)
                      .+||++.+++..|+...
T Consensus       309 ~~Rps~~~l~~~L~~~~  325 (333)
T 2i1m_A          309 THRPTFQQICSFLQEQA  325 (333)
T ss_dssp             GGSCCHHHHHHHHHHHH
T ss_pred             hhCcCHHHHHHHHHHHH
Confidence            99999999999998654

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.18  E-value=2.1e-11  Score=89.01  Aligned_cols=90  Identities=14%  Similarity=0.064  Sum_probs=55.3

Q ss_pred             ccchhhhHhHHHHHHHhC----------CCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhcc-CCCCCHHHHHHHHHH
Q 047465            9 IKSDIFSLGVLMLEILSG----------KKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINL-RHGIYGRTTGHWTLL   77 (139)
Q Consensus         9 ~k~Dv~s~G~~l~ei~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~p~~~~~~~~~l~~~   77 (139)
                      .++||||||+++|||++|          +.|+........................   .+.+. ........+.+++..
T Consensus       236 ~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~li~~  312 (342)
T 1b6c_B          236 KRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRP---NIPNRWQSCEALRVMAKIMRE  312 (342)
T ss_dssp             HHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCC---CCCGGGGTSHHHHHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCC---CCcccccchhHHHHHHHHHHH
Confidence            689999999999999998          5565432221111111111111111111   11000 000111268899999


Q ss_pred             hcccCCCCCCCHHHHHHHHhcccC
Q 047465           78 CAQESADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        78 C~~~~p~~Rps~~~v~~~L~~~~~  101 (139)
                      ||+.+|.+||++.+++..|+++..
T Consensus       313 cl~~dp~~Rps~~~i~~~L~~i~~  336 (342)
T 1b6c_B          313 CWYANGAARLTALRIKKTLSQLSQ  336 (342)
T ss_dssp             HCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HhccChhhCCCHHHHHHHHHHHHH
Confidence            999999999999999999998765

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.18  E-value=1.6e-11  Score=89.86  Aligned_cols=85  Identities=19%  Similarity=0.216  Sum_probs=60.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||+|++++|+++ |+.||......  ....    ....+...   .  .  +......+..++..||+.+
T Consensus       193 ~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~----~~~~~~~~---~--~--~~~~~~~l~~li~~~l~~d  259 (327)
T 3lzb_A          193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISS----ILEKGERL---P--Q--PPICTIDVYMIMRKCWMID  259 (327)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHH----HHHTTCCC---C--C--CTTBCHHHHHHHHHHTCSS
T ss_pred             CCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHH----HHHcCCCC---C--C--CccCCHHHHHHHHHHcCCC
Confidence            3457889999999999999999 99888643221  1111    12222211   1  1  3333447899999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.+++..|+++..
T Consensus       260 p~~Rps~~ell~~L~~~~~  278 (327)
T 3lzb_A          260 ADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             GGGSCCHHHHHHHHHHHHT
T ss_pred             hhHCcCHHHHHHHHHHHHh
Confidence            9999999999999998765

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.18  E-value=3.2e-11  Score=85.95  Aligned_cols=83  Identities=30%  Similarity=0.320  Sum_probs=59.2

Q ss_pred             CCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ..++.++||||+|++++++++ |+.|+.....  .   ... ..+..+...     ..  +......+.+++..||+.+|
T Consensus       196 ~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~--~---~~~-~~~~~~~~~-----~~--~~~~~~~l~~li~~~l~~~p  262 (283)
T 3gen_A          196 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN--S---ETA-EHIAQGLRL-----YR--PHLASEKVYTIMYSCWHEKA  262 (283)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH--H---HHH-HHHHTTCCC-----CC--CTTCCHHHHHHHHHTTCSSG
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCccccCh--h---HHH-HHHhcccCC-----CC--CCcCCHHHHHHHHHHccCCh
Confidence            457889999999999999998 8888853321  1   111 112222211     11  34444588999999999999


Q ss_pred             CCCCCHHHHHHHHhccc
Q 047465           84 DDRPTVYDVVSMLTNEA  100 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~  100 (139)
                      .+||++.+++..|.++.
T Consensus       263 ~~Rps~~~ll~~L~~~~  279 (283)
T 3gen_A          263 DERPTFKILLSNILDVM  279 (283)
T ss_dssp             GGSCCHHHHHHHHHHHH
T ss_pred             hHCcCHHHHHHHHHHHh
Confidence            99999999999998754

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.18  E-value=1.9e-11  Score=87.25  Aligned_cols=83  Identities=18%  Similarity=0.192  Sum_probs=55.6

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++||||+|+++|||++|..++..... ...    ..........     .    +......+.+++..||+.+|.
T Consensus       193 ~~~~~~~DiwslG~il~el~~g~~~~~~~~~-~~~----~~~~~~~~~~-----~----~~~~~~~l~~li~~~l~~dp~  258 (289)
T 4fvq_A          193 KNLNLATDKWSFGTTLWEICSGGDKPLSALD-SQR----KLQFYEDRHQ-----L----PAPKAAELANLINNCMDYEPD  258 (289)
T ss_dssp             GGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-HHH----HHHHHHTTCC-----C----CCCSSCTTHHHHHHHSCSSGG
T ss_pred             CCCCchhHHHHHHHHHHHHHcCCCCCccccc-hHH----HHHHhhccCC-----C----CCCCCHHHHHHHHHHcCCChh
Confidence            4578899999999999999996555422111 111    1111111111     1    111222678899999999999


Q ss_pred             CCCCHHHHHHHHhcccC
Q 047465           85 DRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        85 ~Rps~~~v~~~L~~~~~  101 (139)
                      +||++.+++..|+.+..
T Consensus       259 ~Rps~~~ll~~l~~l~~  275 (289)
T 4fvq_A          259 HRPSFRAIIRDLNSLFT  275 (289)
T ss_dssp             GSCCHHHHHHHHHTCC-
T ss_pred             HCcCHHHHHHHHHHhcC
Confidence            99999999999998877

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.17  E-value=1.8e-11  Score=87.31  Aligned_cols=84  Identities=21%  Similarity=0.197  Sum_probs=59.1

Q ss_pred             CCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ..++.++||||+|++++|+++ |+.|+.....  ......    ...+...   .  .  +......+..++..||+.+|
T Consensus       189 ~~~~~~~Di~slG~il~~llt~g~~p~~~~~~--~~~~~~----~~~~~~~---~--~--~~~~~~~l~~li~~~l~~~p  255 (281)
T 3cc6_A          189 RRFTTASDVWMFAVCMWEILSFGKQPFFWLEN--KDVIGV----LEKGDRL---P--K--PDLCPPVLYTLMTRCWDYDP  255 (281)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG--GGHHHH----HHHTCCC---C--C--CTTCCHHHHHHHHHHTCSSG
T ss_pred             CCCCchhccHHHHHHHHHHHhCCCCCcccCCh--HHHHHH----HhcCCCC---C--C--CCCCCHHHHHHHHHHccCCc
Confidence            457889999999999999998 9988853222  111111    1111111   1  1  33334478899999999999


Q ss_pred             CCCCCHHHHHHHHhcccC
Q 047465           84 DDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~  101 (139)
                      .+||++.+++..|+.+..
T Consensus       256 ~~Rps~~ell~~L~~~~~  273 (281)
T 3cc6_A          256 SDRPRFTELVCSLSDVYQ  273 (281)
T ss_dssp             GGSCCHHHHHHHHHHHHH
T ss_pred             hhCcCHHHHHHHHHHHHH
Confidence            999999999999987643

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.17  E-value=2.5e-11  Score=88.16  Aligned_cols=86  Identities=17%  Similarity=0.160  Sum_probs=60.0

Q ss_pred             CCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ..++.++||||+|++++|+++ |+.|+.....  .....   ... .+...   ..    +......+.+++..||+.+|
T Consensus       214 ~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~~~---~~~-~~~~~---~~----~~~~~~~l~~li~~~l~~dp  280 (323)
T 3qup_A          214 NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN--AEIYN---YLI-GGNRL---KQ----PPECMEEVYDLMYQCWSADP  280 (323)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHH---HHH-TTCCC---CC----CTTCCHHHHHHHHHTTCSSG
T ss_pred             CCCCCccchhhHHHHHHHHHhCCCCCccccCh--HHHHH---HHh-cCCCC---CC----CCccCHHHHHHHHHHccCCh
Confidence            457889999999999999999 8888754322  11111   111 11111   11    22223388999999999999


Q ss_pred             CCCCCHHHHHHHHhcccCCC
Q 047465           84 DDRPTVYDVVSMLTNEATTL  103 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~~~  103 (139)
                      .+||++.+++..|+++...+
T Consensus       281 ~~Rps~~~l~~~l~~~l~~~  300 (323)
T 3qup_A          281 KQRPSFTCLRMELENILGHL  300 (323)
T ss_dssp             GGSCCHHHHHHHHHHHHHC-
T ss_pred             hhCcCHHHHHHHHHHHHHHh
Confidence            99999999999999876643

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.16  E-value=5.4e-11  Score=87.37  Aligned_cols=80  Identities=15%  Similarity=0.208  Sum_probs=54.2

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +.++.++||||+|++++||++|+.||..... .   ..............   ..    +......+.+++..||+.+|.
T Consensus       195 ~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~---~~~~~~~~~~~~~~---~~----~~~~~~~l~~li~~~L~~dp~  263 (343)
T 3dbq_A          195 SKISPKSDVWSLGCILYYMTYGKTPFQQIIN-Q---ISKLHAIIDPNHEI---EF----PDIPEKDLQDVLKCCLKRDPK  263 (343)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHSSCTTTTCCS-H---HHHHHHHHCTTSCC---CC----CCCSCHHHHHHHHHHTCSSTT
T ss_pred             cCCCchhhHHHHHHHHHHHHhCCCcchhhhh-H---HHHHHHHhcCCccc---CC----cccCCHHHHHHHHHHcCCChh
Confidence            5678899999999999999999999864222 1   11111222111111   11    333344788999999999999


Q ss_pred             CCCCHHHHHHH
Q 047465           85 DRPTVYDVVSM   95 (139)
Q Consensus        85 ~Rps~~~v~~~   95 (139)
                      +||++.+++..
T Consensus       264 ~Rpt~~e~l~h  274 (343)
T 3dbq_A          264 QRISIPELLAH  274 (343)
T ss_dssp             TSCCHHHHHTS
T ss_pred             HCCCHHHHHhC
Confidence            99999999863

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.16  E-value=9.3e-11  Score=85.75  Aligned_cols=85  Identities=15%  Similarity=0.091  Sum_probs=56.4

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++||||+|++++||++|+.||.....     ..............   ....  .......+.+++..||+.+|.
T Consensus       251 ~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~li~~~l~~~p~  320 (345)
T 3hko_A          251 ESYGPKCDAWSAGVLLHLLLMGAVPFPGVND-----ADTISQVLNKKLCF---ENPN--YNVLSPLARDLLSNLLNRNVD  320 (345)
T ss_dssp             SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHCCCCT---TSGG--GGGSCHHHHHHHHHHSCSCTT
T ss_pred             CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCh-----HHHHHHHHhccccc---CCcc--cccCCHHHHHHHHHHcCCChh
Confidence            5678899999999999999999999863321     11122222222211   1100  111223788999999999999


Q ss_pred             CCCCHHHHHH--HHhcc
Q 047465           85 DRPTVYDVVS--MLTNE   99 (139)
Q Consensus        85 ~Rps~~~v~~--~L~~~   99 (139)
                      +||++.++++  ++.+.
T Consensus       321 ~Rps~~~~l~hp~~~~~  337 (345)
T 3hko_A          321 ERFDAMRALQHPWISQF  337 (345)
T ss_dssp             TSCCHHHHHHSHHHHTT
T ss_pred             HCCCHHHHhcChhhccC
Confidence            9999999986  34443

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.16  E-value=3.2e-11  Score=87.04  Aligned_cols=80  Identities=16%  Similarity=0.216  Sum_probs=53.5

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|+++|||++|+.||.....  .   .......... ..   ....  +......+.+++..||+.+|
T Consensus       190 ~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~---~~~~~~~~~~-~~---~~~~--~~~~~~~~~~li~~~l~~dp  258 (297)
T 3fxz_A          190 RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP--L---RALYLIATNG-TP---ELQN--PEKLSAIFRDFLNRCLEMDV  258 (297)
T ss_dssp             CSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--H---HHHHHHHHHC-SC---CCSC--GGGSCHHHHHHHHHHSCSST
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--H---HHHHHHHhCC-CC---CCCC--ccccCHHHHHHHHHHccCCh
Confidence            45678999999999999999999999853221  1   1111111111 11   1111  22223378899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.++++
T Consensus       259 ~~Rps~~ell~  269 (297)
T 3fxz_A          259 EKRGSAKELLQ  269 (297)
T ss_dssp             TTSCCHHHHTT
T ss_pred             hHCcCHHHHhh
Confidence            99999999865

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.16  E-value=5.4e-11  Score=86.25  Aligned_cols=85  Identities=22%  Similarity=0.278  Sum_probs=59.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||+|++++++++ |+.|+.....  .   . .......+...   ..    +......+.+++..||+.+
T Consensus       214 ~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~---~-~~~~~~~~~~~---~~----~~~~~~~l~~li~~~l~~d  280 (322)
T 1p4o_A          214 DGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--E---Q-VLRFVMEGGLL---DK----PDNCPDMLFELMRMCWQYN  280 (322)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH--H---H-HHHHHHTTCCC---CC----CTTCCHHHHHHHHHHTCSS
T ss_pred             cCCCCchhhHHHHHHHHHHHHhcCCCccccCCH--H---H-HHHHHHcCCcC---CC----CCCCCHHHHHHHHHHcCCC
Confidence            3467889999999999999999 7777753211  1   1 11112222221   11    2223347889999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.+++..|++...
T Consensus       281 p~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          281 PKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             GGGSCCHHHHHHHHGGGSC
T ss_pred             cccCcCHHHHHHHHHHhhc
Confidence            9999999999999998766

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.16  E-value=5.8e-11  Score=88.97  Aligned_cols=79  Identities=15%  Similarity=0.216  Sum_probs=53.6

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +.++.++||||||+++|||++|+.||..... .   ..............   ..    |......+.+++..||+.+|.
T Consensus       242 ~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-~---~~~~~~~~~~~~~~---~~----~~~~~~~~~~li~~~L~~dP~  310 (390)
T 2zmd_A          242 SKISPKSDVWSLGCILYYMTYGKTPFQQIIN-Q---ISKLHAIIDPNHEI---EF----PDIPEKDLQDVLKCCLKRDPK  310 (390)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-H---HHHHHHHHCTTSCC---CC----CCCSCHHHHHHHHHHTCSSTT
T ss_pred             cCCCChhhHHHHHHHHHHHHHCCCcchhhhH-H---HHHHHHHhCccccC---CC----CccchHHHHHHHHHHcccChh
Confidence            3688999999999999999999999853221 1   11111222211111   11    333344788999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       311 ~Rps~~ell~  320 (390)
T 2zmd_A          311 QRISIPELLA  320 (390)
T ss_dssp             TSCCHHHHHT
T ss_pred             hCCCHHHHhh
Confidence            9999999985

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.16  E-value=7.9e-11  Score=85.28  Aligned_cols=89  Identities=17%  Similarity=0.047  Sum_probs=56.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ++.++.++||||+|++++|+++|+.||....   ..   ............  ....   +...+..+.+++..||+.+|
T Consensus       209 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---~~---~~~~~~~~~~~~--~~~~---~~~~~~~l~~li~~~l~~dP  277 (309)
T 2h34_A          209 ESHATYRADIYALTCVLYECLTGSPPYQGDQ---LS---VMGAHINQAIPR--PSTV---RPGIPVAFDAVIARGMAKNP  277 (309)
T ss_dssp             C----CCCHHHHHHHHHHHHHHSSCSSCSCH---HH---HHHHHHHSCCCC--GGGT---STTCCTHHHHHHHHHTCSSG
T ss_pred             CCCCCchHhHHHHHHHHHHHHHCCCCCCCch---HH---HHHHHhccCCCC--cccc---CCCCCHHHHHHHHHhccCCH
Confidence            4567889999999999999999999985321   11   111122111111  0111   11122378899999999999


Q ss_pred             CCCC-CHHHHHHHHhcccCCC
Q 047465           84 DDRP-TVYDVVSMLTNEATTL  103 (139)
Q Consensus        84 ~~Rp-s~~~v~~~L~~~~~~~  103 (139)
                      .+|| ++.+++..|++.....
T Consensus       278 ~~Rp~s~~~l~~~l~~~l~~~  298 (309)
T 2h34_A          278 EDRYVTCGDLSAAAHAALATA  298 (309)
T ss_dssp             GGSCSSHHHHHHHHHHTCC--
T ss_pred             HHHHHhHHHHHHHHHHHHHhh
Confidence            9999 9999999999876633

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.15  E-value=2.7e-11  Score=86.22  Aligned_cols=84  Identities=23%  Similarity=0.158  Sum_probs=59.0

Q ss_pred             CCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ..++.++||||+|++++|+++ |+.|+.....  ....    .....+...   ..    +......+.+++..||+.+|
T Consensus       189 ~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--~~~~----~~~~~~~~~---~~----~~~~~~~l~~li~~~l~~~p  255 (278)
T 1byg_A          189 KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVV----PRVEKGYKM---DA----PDGCPPAVYEVMKNCWHLDA  255 (278)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG--GGHH----HHHTTTCCC---CC----CTTCCHHHHHHHHHHTCSSG
T ss_pred             CCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH--HHHH----HHHhcCCCC---CC----cccCCHHHHHHHHHHhcCCh
Confidence            457889999999999999998 8888754321  1111    112222211   11    22233478899999999999


Q ss_pred             CCCCCHHHHHHHHhcccC
Q 047465           84 DDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~  101 (139)
                      .+||++.+++..|+.+..
T Consensus       256 ~~Rps~~~l~~~L~~i~~  273 (278)
T 1byg_A          256 AMRPSFLQLREQLEHIKT  273 (278)
T ss_dssp             GGSCCHHHHHHHHHHHHH
T ss_pred             hhCCCHHHHHHHHHHHHh
Confidence            999999999999987643

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.15  E-value=2.8e-11  Score=86.35  Aligned_cols=83  Identities=20%  Similarity=0.123  Sum_probs=58.2

Q ss_pred             CCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ..++.++||||+|++++|+++ |..||.....  .....    .+..+...   ..    +......+.+++..||+.+|
T Consensus       192 ~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~--~~~~~----~i~~~~~~---~~----~~~~~~~l~~li~~~l~~~p  258 (281)
T 1mp8_A          192 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--NDVIG----RIENGERL---PM----PPNCPPTLYSLMTKCWAYDP  258 (281)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHH----HHHTTCCC---CC----CTTCCHHHHHHHHHHTCSSG
T ss_pred             CCCCCccCchHHHHHHHHHHhcCCCCCCcCCH--HHHHH----HHHcCCCC---CC----CCCCCHHHHHHHHHHccCCh
Confidence            457889999999999999997 8888754322  11111    11122211   11    22233478899999999999


Q ss_pred             CCCCCHHHHHHHHhccc
Q 047465           84 DDRPTVYDVVSMLTNEA  100 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~  100 (139)
                      .+||++.+++..|+++.
T Consensus       259 ~~Rps~~~l~~~l~~~~  275 (281)
T 1mp8_A          259 SRRPRFTELKAQLSTIL  275 (281)
T ss_dssp             GGSCCHHHHHHHHHHHH
T ss_pred             hhCcCHHHHHHHHHHHH
Confidence            99999999999998764

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.15  E-value=2.5e-11  Score=86.85  Aligned_cols=86  Identities=22%  Similarity=0.130  Sum_probs=60.6

Q ss_pred             CCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ..++.++||||+|++++||++ |+.|+.....  ....    ..+..+...   ..    +......+.+++..||+.+|
T Consensus       188 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~----~~i~~~~~~---~~----~~~~~~~l~~li~~~l~~~p  254 (287)
T 1u59_A          188 RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVM----AFIEQGKRM---EC----PPECPPELYALMSDCWIYKW  254 (287)
T ss_dssp             CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT--HHHH----HHHHTTCCC---CC----CTTCCHHHHHHHHHTTCSSG
T ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--HHHH----HHHhcCCcC---CC----CCCcCHHHHHHHHHHcCCCh
Confidence            346789999999999999998 9998854321  1111    122222222   11    22233488999999999999


Q ss_pred             CCCCCHHHHHHHHhcccCCC
Q 047465           84 DDRPTVYDVVSMLTNEATTL  103 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~~~  103 (139)
                      .+||++.+++..|+.+....
T Consensus       255 ~~Rps~~~l~~~l~~~~~~~  274 (287)
T 1u59_A          255 EDRPDFLTVEQRMRACYYSL  274 (287)
T ss_dssp             GGSCCHHHHHHHHHHHHHHH
T ss_pred             hhCcCHHHHHHHHHHHHHhc
Confidence            99999999999998875543

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.15  E-value=1.9e-11  Score=88.22  Aligned_cols=84  Identities=19%  Similarity=0.254  Sum_probs=59.1

Q ss_pred             CCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ..++.++||||+|++++||++ |+.|+.....  ....    ..+..+...   ..    +......+.+++..||+.+|
T Consensus       227 ~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--~~~~----~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~dp  293 (314)
T 2ivs_A          227 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP--ERLF----NLLKTGHRM---ER----PDNCSEEMYRLMLQCWKQEP  293 (314)
T ss_dssp             CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHH----HHHHTTCCC---CC----CTTCCHHHHHHHHHHTCSSG
T ss_pred             CCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHH----HHhhcCCcC---CC----CccCCHHHHHHHHHHccCCh
Confidence            346789999999999999999 8888854322  1111    112222211   11    22333488999999999999


Q ss_pred             CCCCCHHHHHHHHhcccC
Q 047465           84 DDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~  101 (139)
                      .+||++.+++..|+++..
T Consensus       294 ~~Rps~~~l~~~l~~~~~  311 (314)
T 2ivs_A          294 DKRPVFADISKDLEKMMV  311 (314)
T ss_dssp             GGSCCHHHHHHHHHHHHH
T ss_pred             hhCcCHHHHHHHHHHHHh
Confidence            999999999999987644

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.15  E-value=2.6e-11  Score=86.30  Aligned_cols=86  Identities=26%  Similarity=0.320  Sum_probs=59.6

Q ss_pred             CCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +.++.++||||+|++++||++ |+.|+....  ....   . ..+..+...     ..  +......+..++..||+.+|
T Consensus       185 ~~~~~~~Di~slG~il~el~~~g~~p~~~~~--~~~~---~-~~~~~~~~~-----~~--~~~~~~~l~~li~~~l~~~p  251 (279)
T 1qpc_A          185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--NPEV---I-QNLERGYRM-----VR--PDNCPEELYQLMRLCWKERP  251 (279)
T ss_dssp             CEECHHHHHHHHHHHHHHHHTTTCCSSTTCC--HHHH---H-HHHHTTCCC-----CC--CTTCCHHHHHHHHHHTCSSG
T ss_pred             CCCCchhhhHHHHHHHHHHHhCCCCCCcccC--HHHH---H-HHHhcccCC-----CC--cccccHHHHHHHHHHhccCh
Confidence            446789999999999999999 888875321  1111   1 112222111     11  33333488999999999999


Q ss_pred             CCCCCHHHHHHHHhcccCCC
Q 047465           84 DDRPTVYDVVSMLTNEATTL  103 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~~~  103 (139)
                      .+||++.+++..|+......
T Consensus       252 ~~Rps~~~l~~~l~~~~~~~  271 (279)
T 1qpc_A          252 EDRPTFDYLRSVLEDFFTAT  271 (279)
T ss_dssp             GGSCCHHHHHHHHHHHHHHC
T ss_pred             hhCCCHHHHHHHHHHHHHhc
Confidence            99999999999998876533

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.15  E-value=3.9e-11  Score=85.65  Aligned_cols=84  Identities=18%  Similarity=0.191  Sum_probs=58.0

Q ss_pred             CCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      .++.++||||+|++++++++ |+.|+.....     ..............   .  .  +......+.+++..||+.+|.
T Consensus       200 ~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~~~~~~~~~---~--~--~~~~~~~l~~li~~~l~~~p~  267 (291)
T 1u46_A          200 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-----SQILHKIDKEGERL---P--R--PEDCPQDIYNVMVQCWAHKPE  267 (291)
T ss_dssp             EEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHHHHTSCCCC---C--C--CTTCCHHHHHHHHHHTCSSGG
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCcccCCH-----HHHHHHHHccCCCC---C--C--CcCcCHHHHHHHHHHccCCcc
Confidence            45778999999999999999 8988853221     11121112111111   1  1  223334789999999999999


Q ss_pred             CCCCHHHHHHHHhcccC
Q 047465           85 DRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        85 ~Rps~~~v~~~L~~~~~  101 (139)
                      +||++.+++..|++...
T Consensus       268 ~Rps~~~l~~~l~~~~~  284 (291)
T 1u46_A          268 DRPTFVALRDFLLEAQP  284 (291)
T ss_dssp             GSCCHHHHHHHHHHHC-
T ss_pred             cCcCHHHHHHHHHHhCc
Confidence            99999999999987655

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.14  E-value=2.9e-11  Score=88.37  Aligned_cols=85  Identities=21%  Similarity=0.180  Sum_probs=59.6

Q ss_pred             CCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +.++.++||||+|++++||++ |+.|+.....  ....    ..+..+...   ..    +......+..++..||+.+|
T Consensus       234 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~----~~~~~~~~~---~~----~~~~~~~l~~li~~~l~~dp  300 (334)
T 2pvf_A          234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELF----KLLKEGHRM---DK----PANCTNELYMMMRDCWHAVP  300 (334)
T ss_dssp             CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHH----HHHHHTCCC---CC----CTTCCHHHHHHHHHHTCSSG
T ss_pred             CCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH--HHHH----HHHhcCCCC---CC----CccCCHHHHHHHHHHccCCh
Confidence            346789999999999999999 8888753211  1111    111112111   11    22333488999999999999


Q ss_pred             CCCCCHHHHHHHHhcccCC
Q 047465           84 DDRPTVYDVVSMLTNEATT  102 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~~  102 (139)
                      .+||++.+++..|+++...
T Consensus       301 ~~Rps~~ell~~L~~l~~~  319 (334)
T 2pvf_A          301 SQRPTFKQLVEDLDRILTL  319 (334)
T ss_dssp             GGSCCHHHHHHHHHHHHHH
T ss_pred             hhCcCHHHHHHHHHHHHhc
Confidence            9999999999999987653

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.14  E-value=4.2e-11  Score=87.23  Aligned_cols=92  Identities=18%  Similarity=0.168  Sum_probs=57.4

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCc---------hHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHH
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDS---------LIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTL   76 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~   76 (139)
                      .++.++||||+|++++++++|+.|+.......         .............+...   ..    +......+.+++.
T Consensus       206 ~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~l~~li~  278 (327)
T 3lxl_A          206 IFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRL---PA----PPACPAEVHELMK  278 (327)
T ss_dssp             EEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCC---CC----CTTCCHHHHHHHH
T ss_pred             CCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCC---CC----CCcccHHHHHHHH
Confidence            45779999999999999999998874211100         00001111111111111   00    2233348899999


Q ss_pred             HhcccCCCCCCCHHHHHHHHhcccCCCC
Q 047465           77 LCAQESADDRPTVYDVVSMLTNEATTLN  104 (139)
Q Consensus        77 ~C~~~~p~~Rps~~~v~~~L~~~~~~~~  104 (139)
                      .||+.+|.+||++.+++..|+.+.....
T Consensus       279 ~~l~~dP~~Rps~~ell~~L~~~~~~~~  306 (327)
T 3lxl_A          279 LCWAPSPQDRPSFSALGPQLDMLWSGSR  306 (327)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred             HHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence            9999999999999999999998876443

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.13  E-value=4.9e-11  Score=86.89  Aligned_cols=84  Identities=20%  Similarity=0.188  Sum_probs=59.3

Q ss_pred             CCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      .++.++||||+|++++||++ |+.|+.....     .. ....+..+...   .  .  +......+.+++..||+.+|.
T Consensus       217 ~~~~~~Di~slG~il~ellt~g~~pf~~~~~-----~~-~~~~~~~~~~~---~--~--~~~~~~~l~~li~~~l~~dp~  283 (327)
T 1fvr_A          217 VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-----AE-LYEKLPQGYRL---E--K--PLNCDDEVYDLMRQCWREKPY  283 (327)
T ss_dssp             EECHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HH-HHHHGGGTCCC---C--C--CTTBCHHHHHHHHHHTCSSGG
T ss_pred             cCCchhcchHHHHHHHHHHcCCCCCCCCCcH-----HH-HHHHhhcCCCC---C--C--CCCCCHHHHHHHHHHccCChh
Confidence            46789999999999999998 9988853211     11 11222222211   1  1  223334889999999999999


Q ss_pred             CCCCHHHHHHHHhcccCC
Q 047465           85 DRPTVYDVVSMLTNEATT  102 (139)
Q Consensus        85 ~Rps~~~v~~~L~~~~~~  102 (139)
                      +||++.+++..|+.+...
T Consensus       284 ~Rps~~ell~~L~~~~~~  301 (327)
T 1fvr_A          284 ERPSFAQILVSLNRMLEE  301 (327)
T ss_dssp             GSCCHHHHHHHHHHHHHS
T ss_pred             hCcCHHHHHHHHHHHHHh
Confidence            999999999999887663

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.13  E-value=6.3e-11  Score=86.40  Aligned_cols=80  Identities=13%  Similarity=0.152  Sum_probs=53.2

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ++.++.++||||+|++++||++|+.|+.....  .....    .+......   .+..  +......+.+++..||+.+|
T Consensus       215 ~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~--~~~~~----~~~~~~~~---~~~~--~~~~~~~l~~li~~~l~~dp  283 (321)
T 2c30_A          215 RSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP--VQAMK----RLRDSPPP---KLKN--SHKVSPVLRDFLERMLVRDP  283 (321)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHH----HHHHSSCC---CCTT--GGGSCHHHHHHHHHHSCSST
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHH----HHhcCCCC---CcCc--cccCCHHHHHHHHHHccCCh
Confidence            45678899999999999999999999853211  11111    11111111   1111  11122378899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       284 ~~Rps~~ell~  294 (321)
T 2c30_A          284 QERATAQELLD  294 (321)
T ss_dssp             TTSCCHHHHHT
T ss_pred             hhCcCHHHHhc
Confidence            99999999976

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.13  E-value=1e-11  Score=90.28  Aligned_cols=91  Identities=20%  Similarity=0.197  Sum_probs=59.3

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCc---------hHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHH
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDS---------LIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTL   76 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~   76 (139)
                      .++.++||||+|++++++++|+.|+.......         .............+...   .  .  +......+.+++.
T Consensus       213 ~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~--~~~~~~~l~~li~  285 (318)
T 3lxp_A          213 KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERL---P--R--PDKCPAEVYHLMK  285 (318)
T ss_dssp             EEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCC---C--C--CTTCCHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCC---C--C--CccccHHHHHHHH
Confidence            45678999999999999999998874321100         00000011111111111   0  0  2333348899999


Q ss_pred             HhcccCCCCCCCHHHHHHHHhcccCCC
Q 047465           77 LCAQESADDRPTVYDVVSMLTNEATTL  103 (139)
Q Consensus        77 ~C~~~~p~~Rps~~~v~~~L~~~~~~~  103 (139)
                      .||+.+|.+||++.+++..|+.+....
T Consensus       286 ~~l~~dP~~Rps~~ell~~L~~l~~~~  312 (318)
T 3lxp_A          286 NCWETEASFRPTFENLIPILKTVHEKY  312 (318)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence            999999999999999999998876544

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.12  E-value=7.1e-11  Score=84.73  Aligned_cols=87  Identities=23%  Similarity=0.267  Sum_probs=59.0

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCC-CCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKK-NTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ..++.++||||+|++++++++|.. |+.....  ......    ...+...     ..  +...+..+.+++..||+.+|
T Consensus       207 ~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~--~~~~~~----~~~~~~~-----~~--~~~~~~~l~~li~~~l~~~p  273 (298)
T 3f66_A          207 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--FDITVY----LLQGRRL-----LQ--PEYCPDPLYEVMLKCWHPKA  273 (298)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT--TTHHHH----HHTTCCC-----CC--CTTCCHHHHHHHHHHTCSSG
T ss_pred             CCCChHHHHHHHHHHHHHHHhCCCCCCccCCH--HHHHHH----HhcCCCC-----CC--CccCCHHHHHHHHHHcCCCh
Confidence            457889999999999999999554 4432211  111111    1112111     11  33334478999999999999


Q ss_pred             CCCCCHHHHHHHHhcccCCCC
Q 047465           84 DDRPTVYDVVSMLTNEATTLN  104 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~~~~  104 (139)
                      .+||++.++++.|+.+...+.
T Consensus       274 ~~Rps~~ell~~L~~~~~~~~  294 (298)
T 3f66_A          274 EMRPSFSELVSRISAIFSTFI  294 (298)
T ss_dssp             GGSCCHHHHHHHHHHHHHTSC
T ss_pred             hhCcCHHHHHHHHHHHHHhhc
Confidence            999999999999998766443

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.12  E-value=6.5e-11  Score=86.21  Aligned_cols=85  Identities=22%  Similarity=0.223  Sum_probs=59.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||+|+++++|++ |+.|+....  .....    .....+...   ..    +......+..++..||+.+
T Consensus       219 ~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--~~~~~----~~~~~~~~~---~~----~~~~~~~l~~li~~~l~~d  285 (327)
T 2yfx_A          219 EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS--NQEVL----EFVTSGGRM---DP----PKNCPGPVYRIMTQCWQHQ  285 (327)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--HHHHH----HHHHTTCCC---CC----CTTCCHHHHHHHHHHTCSS
T ss_pred             CCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC--HHHHH----HHHhcCCCC---CC----CCCCCHHHHHHHHHHhcCC
Confidence            3467889999999999999998 888875321  11111    112222211   11    2223347889999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.+++..|+....
T Consensus       286 p~~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          286 PEDRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             hhhCcCHHHHHHHHHHHhc
Confidence            9999999999999987654

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.12  E-value=1.3e-10  Score=84.14  Aligned_cols=79  Identities=15%  Similarity=0.216  Sum_probs=53.9

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++||||+|++++||++|+.|+..... .   ..............   ..    +......+.+++..||+.+|.
T Consensus       214 ~~~~~~~Di~slG~il~el~~g~~pf~~~~~-~---~~~~~~~~~~~~~~---~~----~~~~~~~l~~li~~~l~~dp~  282 (313)
T 3cek_A          214 SKISPKSDVWSLGCILYYMTYGKTPFQQIIN-Q---ISKLHAIIDPNHEI---EF----PDIPEKDLQDVLKCCLKRDPK  282 (313)
T ss_dssp             -CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-H---HHHHHHHHCTTSCC---CC----CCCSCHHHHHHHHHHTCSSTT
T ss_pred             ccCCchHHHHHHHHHHHHHHhCCCchhhHHH-H---HHHHHHHHhccccc---CC----cccchHHHHHHHHHHccCCcc
Confidence            4678899999999999999999999853221 1   11111122211111   11    333344788999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       283 ~Rps~~ell~  292 (313)
T 3cek_A          283 QRISIPELLA  292 (313)
T ss_dssp             TSCCHHHHHT
T ss_pred             cCcCHHHHhc
Confidence            9999999975

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.12  E-value=6.5e-11  Score=84.09  Aligned_cols=82  Identities=18%  Similarity=0.113  Sum_probs=56.1

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++||||+|++++++++|+.|+.....  ....    ..+..+...   .+    +......+.+++..||+.+|.
T Consensus       191 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~----~~i~~~~~~---~~----~~~~~~~l~~li~~~l~~~p~  257 (279)
T 2w5a_A          191 MSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--KELA----GKIREGKFR---RI----PYRYSDELNEIITRMLNLKDY  257 (279)
T ss_dssp             C-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH----HHHHHTCCC---CC----CTTSCHHHHHHHHHHTCSSGG
T ss_pred             CCCCchhhHHHHHHHHHHHHHCCCCCcccCH--HHHH----HHHhhcccc---cC----CcccCHHHHHHHHHHcCCCcc
Confidence            4578899999999999999999999864321  1111    112222221   11    222234788999999999999


Q ss_pred             CCCCHHHHHHHHhcc
Q 047465           85 DRPTVYDVVSMLTNE   99 (139)
Q Consensus        85 ~Rps~~~v~~~L~~~   99 (139)
                      +||++.+++..+...
T Consensus       258 ~Rps~~~ll~~~~~~  272 (279)
T 2w5a_A          258 HRPSVEEILENPLIL  272 (279)
T ss_dssp             GSCCHHHHHTSTTCC
T ss_pred             cCCCHHHHHhChhhh
Confidence            999999998766543

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.11  E-value=1e-10  Score=86.35  Aligned_cols=79  Identities=22%  Similarity=0.291  Sum_probs=54.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      .+.++.++||||||++++||++|+.|+.....     ............ .   ...   +......+.+++..||+.+|
T Consensus       227 ~~~~~~~~DiwslG~il~ell~g~~p~~~~~~-----~~~~~~~~~~~~-~---~~~---~~~~~~~l~~li~~~l~~dP  294 (348)
T 1u5q_A          227 EGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSALYHIAQNES-P---ALQ---SGHWSEYFRNFVDSCLQKIP  294 (348)
T ss_dssp             SCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHHHHSCC-C---CCC---CTTSCHHHHHHHHHHTCSSG
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHhcCC-C---CCC---CCCCCHHHHHHHHHHcccCh
Confidence            45788999999999999999999999853211     111111121111 1   111   22233478899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       295 ~~Rps~~~ll~  305 (348)
T 1u5q_A          295 QDRPTSEVLLK  305 (348)
T ss_dssp             GGSCCHHHHTT
T ss_pred             hhCcCHHHHhh
Confidence            99999999875

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.11  E-value=3.5e-11  Score=88.07  Aligned_cols=76  Identities=11%  Similarity=0.083  Sum_probs=52.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..|+.++||||+||+++||++|+.||....  ...   ....... +..    .+    |......+.+++.+|++.||
T Consensus       208 ~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~---~~~~i~~-~~~----~~----p~~~s~~~~dli~~lL~~dp  273 (311)
T 4aw0_A          208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGN--EGL---IFAKIIK-LEY----DF----PEKFFPKARDLVEKLLVLDA  273 (311)
T ss_dssp             HSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHH---HHHHHHH-TCC----CC----CTTCCHHHHHHHHHHSCSSG
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHH---HHHHHHc-CCC----CC----CcccCHHHHHHHHHHccCCH
Confidence            4568899999999999999999999995321  111   1111121 111    11    22223378899999999999


Q ss_pred             CCCCCHHHHH
Q 047465           84 DDRPTVYDVV   93 (139)
Q Consensus        84 ~~Rps~~~v~   93 (139)
                      .+||++.++.
T Consensus       274 ~~R~t~~e~~  283 (311)
T 4aw0_A          274 TKRLGCEEME  283 (311)
T ss_dssp             GGSTTSGGGT
T ss_pred             hHCcChHHHc
Confidence            9999998763

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.10  E-value=9.6e-11  Score=83.59  Aligned_cols=84  Identities=20%  Similarity=0.183  Sum_probs=58.8

Q ss_pred             CCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +.++.++||||+|++++++++ |..|+.....  .....    ........   .  .  +......+.+++..|++.+|
T Consensus       187 ~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~--~~~~~----~~~~~~~~---~--~--~~~~~~~l~~li~~~l~~dp  253 (288)
T 3kfa_A          187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYE----LLEKDYRM---E--R--PEGCPEKVYELMRACWQWNP  253 (288)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHH----HHHTTCCC---C--C--CTTCCHHHHHHHHHHTCSSG
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHH----HHhccCCC---C--C--CCCCCHHHHHHHHHHhCCCh
Confidence            457889999999999999999 8888754322  11111    11112111   1  1  33333488999999999999


Q ss_pred             CCCCCHHHHHHHHhcccC
Q 047465           84 DDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~  101 (139)
                      .+||++.++++.|+....
T Consensus       254 ~~Rps~~~~~~~l~~~~~  271 (288)
T 3kfa_A          254 SDRPSFAEIHQAFETMFQ  271 (288)
T ss_dssp             GGSCCHHHHHHHHHHHHH
T ss_pred             hhCcCHHHHHHHHHHHHH
Confidence            999999999999887543

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.10  E-value=1.9e-10  Score=83.30  Aligned_cols=88  Identities=15%  Similarity=0.123  Sum_probs=56.0

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|+++|||++|+.||.....     ..............   ....  .......+.+++..||+.+|
T Consensus       193 ~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~-----~~~~~~~~~~~~~~---~~~~--~~~~~~~l~~li~~~l~~dP  262 (311)
T 3ork_A          193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP-----VSVAYQHVREDPIP---PSAR--HEGLSADLDAVVLKALAKNP  262 (311)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHCCCCC---HHHH--STTCCHHHHHHHHHHTCSSG
T ss_pred             CCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHhcCCCCC---cccc--cCCCCHHHHHHHHHHHhcCH
Confidence            34678899999999999999999999853221     11122222222221   1111  12223378899999999999


Q ss_pred             CCCCCHHHHH-HHHhcccC
Q 047465           84 DDRPTVYDVV-SMLTNEAT  101 (139)
Q Consensus        84 ~~Rps~~~v~-~~L~~~~~  101 (139)
                      .+||+..+++ ..+.....
T Consensus       263 ~~R~~~~~~l~~~l~~~~~  281 (311)
T 3ork_A          263 ENRYQTAAEMRADLVRVHN  281 (311)
T ss_dssp             GGSCSSHHHHHHHHHHHHT
T ss_pred             hhChhhHHHHHHHHHHHhc
Confidence            9999766554 45555444

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.10  E-value=5.8e-11  Score=84.73  Aligned_cols=80  Identities=21%  Similarity=0.288  Sum_probs=52.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|++++++++|+.|+........    ...........    ...   +......+.+++..||+.+|
T Consensus       187 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~----~~~---~~~~~~~~~~li~~~l~~~p  255 (290)
T 3fme_A          187 QKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ----QLKQVVEEPSP----QLP---ADKFSAEFVDFTSQCLKKNS  255 (290)
T ss_dssp             C--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH----HHHHHHHSCCC----CCC---TTTSCHHHHHHHHHHTCSSG
T ss_pred             CcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHH----HHHHHhccCCC----Ccc---cccCCHHHHHHHHHHhhcCh
Confidence            44678899999999999999999999864222111    11111111111    111   11223378899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.++++
T Consensus       256 ~~Rpt~~e~l~  266 (290)
T 3fme_A          256 KERPTYPELMQ  266 (290)
T ss_dssp             GGSCCHHHHTT
T ss_pred             hhCcCHHHHHh
Confidence            99999999875

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.10  E-value=1.9e-10  Score=81.88  Aligned_cols=77  Identities=22%  Similarity=0.243  Sum_probs=53.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|++++++++|+.|+.....     .... ..+.....    ..    |......+.+++..||+.+|
T Consensus       181 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~-~~~~~~~~----~~----~~~~~~~~~~li~~~l~~~p  246 (279)
T 3fdn_A          181 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-----QETY-KRISRVEF----TF----PDFVTEGARDLISRLLKHNP  246 (279)
T ss_dssp             TCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHH-HHHHHTCC----CC----CTTSCHHHHHHHHHHCCSSG
T ss_pred             cCCCCccchhHhHHHHHHHHHHCCCCCCCCcH-----HHHH-HHHHhCCC----CC----CCcCCHHHHHHHHHHhccCh
Confidence            44567899999999999999999999863211     1111 11111111    11    22233478899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       247 ~~Rps~~e~l~  257 (279)
T 3fdn_A          247 SQRPMLREVLE  257 (279)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hhCCCHHHHhh
Confidence            99999999986

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.10  E-value=1.6e-10  Score=82.69  Aligned_cols=79  Identities=14%  Similarity=0.191  Sum_probs=53.8

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +.++.++||||+|+++++|++|+.|+..... .   .. .......+...   ...   +......+.+++..||+.+|.
T Consensus       204 ~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-~---~~-~~~~~~~~~~~---~~~---~~~~~~~l~~li~~~l~~dp~  272 (290)
T 1t4h_A          204 EKYDESVDVYAFGMCMLEMATSEYPYSECQN-A---AQ-IYRRVTSGVKP---ASF---DKVAIPEVKEIIEGCIRQNKD  272 (290)
T ss_dssp             TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-H---HH-HHHHHTTTCCC---GGG---GGCCCHHHHHHHHHHSCSSGG
T ss_pred             ccCCCcchHHHHHHHHHHHHhCCCCCCCcCc-H---HH-HHHHHhccCCc---ccc---CCCCCHHHHHHHHHHccCChh
Confidence            4578899999999999999999999864222 1   11 11222222221   111   122223789999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       273 ~Rps~~ell~  282 (290)
T 1t4h_A          273 ERYSIKDLLN  282 (290)
T ss_dssp             GSCCHHHHHT
T ss_pred             hCCCHHHHhh
Confidence            9999999875

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.09  E-value=1.2e-10  Score=84.13  Aligned_cols=81  Identities=17%  Similarity=0.276  Sum_probs=52.3

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ...++.++||||||++++||++|+.|+..... ...   ....... +...   .+..  .......+..++..||+.+|
T Consensus       203 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~---~~~~~~~-~~~~---~~~~--~~~~~~~l~~li~~~l~~dp  272 (318)
T 2dyl_A          203 KPDYDIRADVWSLGISLVELATGQFPYKNCKT-DFE---VLTKVLQ-EEPP---LLPG--HMGFSGDFQSFVKDCLTKDH  272 (318)
T ss_dssp             ---CCTHHHHHHHHHHHHHHHHSSCTTTTCCS-HHH---HHHHHHH-SCCC---CCCS--SSCCCHHHHHHHHHHTCSCT
T ss_pred             ccCCccccchhhHHHHHHHHHhCCCCCCCCCc-cHH---HHHHHhc-cCCC---CCCc--cCCCCHHHHHHHHHHccCCh
Confidence            34578899999999999999999999864221 111   1111111 1111   1111  11223478899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       273 ~~Rps~~~ll~  283 (318)
T 2dyl_A          273 RKRPKYNKLLE  283 (318)
T ss_dssp             TTSCCHHHHTT
T ss_pred             hHCcCHHHHhh
Confidence            99999999875

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.09  E-value=1.9e-10  Score=81.88  Aligned_cols=81  Identities=11%  Similarity=-0.012  Sum_probs=53.2

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|++++++++|+.|+.....  .....   .........   ....  .......+.+++..|++.+|
T Consensus       181 ~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--~~~~~---~~~~~~~~~---~~~~--~~~~~~~~~~li~~~l~~dp  250 (284)
T 3kk8_A          181 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYA---QIKAGAYDY---PSPE--WDTVTPEAKSLIDSMLTVNP  250 (284)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHH---HHHHTCCCC---CTTT--TTTSCHHHHHHHHHHSCSST
T ss_pred             CCCCCcccchHHHHHHHHHHHHCCCCCCCCch--hHHHH---HHHhccccC---Cchh--hcccCHHHHHHHHHHcccCh
Confidence            44578899999999999999999999853221  11111   111111111   0000  11223378899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       251 ~~Rps~~~~l~  261 (284)
T 3kk8_A          251 KKRITADQALK  261 (284)
T ss_dssp             TTSCCHHHHTT
T ss_pred             hhCCCHHHHhc
Confidence            99999999976

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.09  E-value=1.4e-10  Score=83.32  Aligned_cols=80  Identities=14%  Similarity=0.259  Sum_probs=53.5

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|+++++|++|+.|+.....     ......... ....   ....  +......+..++..||+.+|
T Consensus       196 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~-~~~~---~~~~--~~~~~~~l~~li~~~l~~dp  264 (302)
T 2j7t_A          196 DTPYDYKADIWSLGITLIEMAQIEPPHHELNP-----MRVLLKIAK-SDPP---TLLT--PSKWSVEFRDFLKIALDKNP  264 (302)
T ss_dssp             STTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHHHH-SCCC---CCSS--GGGSCHHHHHHHHHHSCSCT
T ss_pred             CCCCchhhhHHHHHHHHHHHhcCCCCCccCCH-----HHHHHHHhc-cCCc---ccCC--ccccCHHHHHHHHHHcccCh
Confidence            45678899999999999999999999864321     111111111 1111   1111  22223378899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       265 ~~Rps~~~ll~  275 (302)
T 2j7t_A          265 ETRPSAAQLLE  275 (302)
T ss_dssp             TTSCCHHHHTT
T ss_pred             hhCCCHHHHhc
Confidence            99999998854

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.08  E-value=9.1e-11  Score=84.23  Aligned_cols=88  Identities=15%  Similarity=0.115  Sum_probs=56.4

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCc---------CchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHH
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWT---------DSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTL   76 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~   76 (139)
                      .++.++||||+|++++++++|+.|+.....         ...............+...   ..    +......+.+++.
T Consensus       205 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~l~~li~  277 (302)
T 4e5w_A          205 KFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRL---PC----PPNCPDEVYQLMR  277 (302)
T ss_dssp             EEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCC---CC----CTTCCHHHHHHHH
T ss_pred             CCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCC---CC----CCCCCHHHHHHHH
Confidence            456789999999999999999887531100         0000011111111111111   11    2223348899999


Q ss_pred             HhcccCCCCCCCHHHHHHHHhccc
Q 047465           77 LCAQESADDRPTVYDVVSMLTNEA  100 (139)
Q Consensus        77 ~C~~~~p~~Rps~~~v~~~L~~~~  100 (139)
                      .||+.+|.+||++.++++.|+.+.
T Consensus       278 ~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          278 KCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             HTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHcCCCCCCCCCHHHHHHHHHHHh
Confidence            999999999999999999998753

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.08  E-value=1.2e-10  Score=84.82  Aligned_cols=89  Identities=16%  Similarity=0.203  Sum_probs=57.3

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcC----------chHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHH
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTD----------SLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWT   75 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~   75 (139)
                      .++.++||||+|++++|+++|+.|+......          ..............+...   ..    +......+..++
T Consensus       224 ~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~l~~li  296 (326)
T 2w1i_A          224 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL---PR----PDGCPDEIYMIM  296 (326)
T ss_dssp             EEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCC---CC----CTTCCHHHHHHH
T ss_pred             CCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCC---CC----CCcccHHHHHHH
Confidence            3578899999999999999998876421000          000000111111111111   10    223334889999


Q ss_pred             HHhcccCCCCCCCHHHHHHHHhcccC
Q 047465           76 LLCAQESADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        76 ~~C~~~~p~~Rps~~~v~~~L~~~~~  101 (139)
                      ..||+.+|.+||++.+++..|+++..
T Consensus       297 ~~cl~~dP~~Rps~~el~~~L~~l~~  322 (326)
T 2w1i_A          297 TECWNNNVNQRPSFRDLALRVDQIRD  322 (326)
T ss_dssp             HHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            99999999999999999999987643

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.08  E-value=2.3e-10  Score=83.48  Aligned_cols=81  Identities=10%  Similarity=0.029  Sum_probs=53.2

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|+++++|++|+.||.....  ......+. ........   ..    .......+.+++..||+.+|
T Consensus       207 ~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~-~~~~~~~~---~~----~~~~~~~~~~li~~~L~~dP  276 (327)
T 3lm5_A          207 YDPITTATDMWNIGIIAYMLLTHTSPFVGEDN--QETYLNIS-QVNVDYSE---ET----FSSVSQLATDFIQSLLVKNP  276 (327)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHH-HTCCCCCT---TT----TTTSCHHHHHHHHHHSCSSG
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--hHHHHHHH-hcccccCc---hh----hcccCHHHHHHHHHHcCCCh
Confidence            45678899999999999999999999853221  11111111 11111111   10    11223378899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       277 ~~Rpt~~~ll~  287 (327)
T 3lm5_A          277 EKRPTAEICLS  287 (327)
T ss_dssp             GGSCCHHHHTT
T ss_pred             hhCcCHHHHhC
Confidence            99999999875

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.07  E-value=6.9e-10  Score=79.81  Aligned_cols=89  Identities=15%  Similarity=0.167  Sum_probs=59.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|+++|++++|+.||.....     .............. +..-..  +.+ +..+..++.+|++.+|
T Consensus       186 ~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~-----~~~~~~~~~~~~~~-~~~~~~--~~~-~~~l~~li~~~l~~dp  256 (294)
T 4eqm_A          186 GEATDECTDIYSIGIVLYEMLVGEPPFNGETA-----VSIAIKHIQDSVPN-VTTDVR--KDI-PQSLSNVILRATEKDK  256 (294)
T ss_dssp             TCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH-----HHHHHHHHSSCCCC-HHHHSC--TTS-CHHHHHHHHHHSCSSG
T ss_pred             CCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHhhccCCC-cchhcc--cCC-CHHHHHHHHHHhcCCH
Confidence            34577899999999999999999999863221     11111222221111 001111  222 2378899999999999


Q ss_pred             CCCC-CHHHHHHHHhcccC
Q 047465           84 DDRP-TVYDVVSMLTNEAT  101 (139)
Q Consensus        84 ~~Rp-s~~~v~~~L~~~~~  101 (139)
                      .+|| ++.++...|+....
T Consensus       257 ~~R~~~~~~l~~~l~~~~~  275 (294)
T 4eqm_A          257 ANRYKTIQEMKDDLSSVLH  275 (294)
T ss_dssp             GGSCSSHHHHHHHHHTSSS
T ss_pred             hHccccHHHHHHHHHHHHh
Confidence            9998 89999999988765

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.07  E-value=2.5e-10  Score=83.72  Aligned_cols=73  Identities=15%  Similarity=0.095  Sum_probs=51.4

Q ss_pred             CccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCCC
Q 047465            8 SIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRP   87 (139)
Q Consensus         8 s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~Rp   87 (139)
                      +.++||||+|++++||++|+.||....     ...............         |......+..++.+|++.||.+||
T Consensus       192 ~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~~~~---------p~~~s~~~~~li~~~L~~dP~~R~  257 (328)
T 3fe3_A          192 GPEVDVWSLGVILYTLVSGSLPFDGQN-----LKELRERVLRGKYRI---------PFYMSTDCENLLKRFLVLNPIKRG  257 (328)
T ss_dssp             SHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCCC---------CTTSCHHHHHHHHHHCCSSTTTSC
T ss_pred             CchhhhhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCCCC---------CCCCCHHHHHHHHHHCCCChhHCc
Confidence            578999999999999999999986322     111111111111111         333334788999999999999999


Q ss_pred             CHHHHHH
Q 047465           88 TVYDVVS   94 (139)
Q Consensus        88 s~~~v~~   94 (139)
                      ++.++++
T Consensus       258 t~~eil~  264 (328)
T 3fe3_A          258 TLEQIMK  264 (328)
T ss_dssp             CHHHHTT
T ss_pred             CHHHHhc
Confidence            9999875

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.07  E-value=1.9e-10  Score=83.62  Aligned_cols=77  Identities=19%  Similarity=0.194  Sum_probs=48.8

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .+..|+.++||||+||++|||++   ||..    ........ ........+   +...  ..  ......++..||+.|
T Consensus       203 ~~~~y~~~~DiwSlGvilyell~---Pf~~----~~~~~~~~-~~~~~~~~p---~~~~--~~--~~~~~~li~~~L~~d  267 (299)
T 4g31_A          203 HGNSYSHKVDIFSLGLILFELLY---PFST----QMERVRTL-TDVRNLKFP---PLFT--QK--YPCEYVMVQDMLSPS  267 (299)
T ss_dssp             TTCCCCTHHHHHHHHHHHHHHHS---CCSS----HHHHHHHH-HHHHTTCCC---HHHH--HH--CHHHHHHHHHHTCSS
T ss_pred             cCCCCCCHHHHHHHHHHHHHHcc---CCCC----ccHHHHHH-HHHhcCCCC---CCCc--cc--CHHHHHHHHHHcCCC
Confidence            35578999999999999999996   5531    11111111 112222222   1111  00  115677899999999


Q ss_pred             CCCCCCHHHHHH
Q 047465           83 ADDRPTVYDVVS   94 (139)
Q Consensus        83 p~~Rps~~~v~~   94 (139)
                      |.+||++.++++
T Consensus       268 P~~Rps~~eil~  279 (299)
T 4g31_A          268 PMERPEAINIIE  279 (299)
T ss_dssp             GGGSCCHHHHHT
T ss_pred             hhHCcCHHHHhc
Confidence            999999999875

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.07  E-value=2.4e-10  Score=83.43  Aligned_cols=77  Identities=13%  Similarity=0.107  Sum_probs=51.4

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDR   86 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~R   86 (139)
                      .+.++||||+|+++++|++|+.||............+.    ......   ..    .......+.+++.+|++.+|.+|
T Consensus       185 ~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~----~~~~~~---~~----~~~~~~~~~~li~~~L~~dP~~R  253 (323)
T 3tki_A          185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK----EKKTYL---NP----WKKIDSAPLALLHKILVENPSAR  253 (323)
T ss_dssp             CHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHH----TTCTTS---TT----GGGSCHHHHHHHHHHSCSSTTTS
T ss_pred             CCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh----cccccC---Cc----cccCCHHHHHHHHHHccCChhhC
Confidence            36789999999999999999999864332222211111    111111   00    11122378899999999999999


Q ss_pred             CCHHHHHH
Q 047465           87 PTVYDVVS   94 (139)
Q Consensus        87 ps~~~v~~   94 (139)
                      |++.++++
T Consensus       254 ~t~~eil~  261 (323)
T 3tki_A          254 ITIPDIKK  261 (323)
T ss_dssp             CCHHHHTT
T ss_pred             cCHHHHhh
Confidence            99999875

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.07  E-value=2.1e-10  Score=81.95  Aligned_cols=77  Identities=19%  Similarity=0.282  Sum_probs=51.2

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDR   86 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~R   86 (139)
                      ++.++||||||+++|+|++|+.|+.........    ...........   .+    +......+..++..||+.+|.+|
T Consensus       202 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~----~~~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~dp~~R  270 (295)
T 2clq_A          202 YGKAADIWSLGCTIIEMATGKPPFYELGEPQAA----MFKVGMFKVHP---EI----PESMSAEAKAFILKCFEPDPDKR  270 (295)
T ss_dssp             CSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHH----HHHHHHHCCCC---CC----CTTSCHHHHHHHHHTTCSSTTTS
T ss_pred             CCcHHHHHHHHHHHHHHHHCCCCccCCCchhHH----HHhhccccccc---cc----cccCCHHHHHHHHHHccCChhhC
Confidence            678999999999999999999998532211110    11100001111   11    22223378899999999999999


Q ss_pred             CCHHHHHH
Q 047465           87 PTVYDVVS   94 (139)
Q Consensus        87 ps~~~v~~   94 (139)
                      |++.+++.
T Consensus       271 ps~~~ll~  278 (295)
T 2clq_A          271 ACANDLLV  278 (295)
T ss_dssp             CCHHHHHT
T ss_pred             CCHHHHhc
Confidence            99999874

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.06  E-value=2.2e-10  Score=81.94  Aligned_cols=79  Identities=15%  Similarity=0.075  Sum_probs=51.7

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +.++.++||||+|++++||++|+.||.....  .   .............   .. .  .......+.+++..||+.+|.
T Consensus       200 ~~~~~~~Di~slG~il~~ll~g~~pf~~~~~--~---~~~~~~~~~~~~~---~~-~--~~~~~~~~~~li~~~L~~dP~  268 (285)
T 3is5_A          200 RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL--E---EVQQKATYKEPNY---AV-E--CRPLTPQAVDLLKQMLTKDPE  268 (285)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--H---HHHHHHHHCCCCC---CC-----CCCCHHHHHHHHHHTCSCTT
T ss_pred             cCCCcccCeehHHHHHHHHHhCCCCCCCCCH--H---HHHhhhccCCccc---cc-c--cCcCCHHHHHHHHHHccCChh
Confidence            4567899999999999999999999853221  1   1111111111100   00 0  111233788999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       269 ~Rps~~e~l~  278 (285)
T 3is5_A          269 RRPSAAQVLH  278 (285)
T ss_dssp             TSCCHHHHHT
T ss_pred             hCcCHHHHhc
Confidence            9999999875

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.06  E-value=4.3e-10  Score=81.59  Aligned_cols=97  Identities=5%  Similarity=-0.046  Sum_probs=59.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhh-------------hccCCCCC---
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLI-------------INLRHGIY---   67 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~d~~p~~~---   67 (139)
                      +..++.++||||+|+++|||++|+.||...... ..................+..+             ........   
T Consensus       197 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (319)
T 4euu_A          197 QKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP-RRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGL  275 (319)
T ss_dssp             CCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCG-GGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHH
T ss_pred             cCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc-chhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhH
Confidence            457889999999999999999999998543321 1111111111111100000000             00000111   


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHhcccC
Q 047465           68 GRTTGHWTLLCAQESADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        68 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~L~~~~~  101 (139)
                      ...+..++..|++.||.+||++.+++....+...
T Consensus       276 ~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~  309 (319)
T 4euu_A          276 QVLLTPVLANILEADQEKCWGFDQFFAETSDILH  309 (319)
T ss_dssp             HHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred             HHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence            1167789999999999999999999999887655

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.06  E-value=3.1e-10  Score=80.62  Aligned_cols=82  Identities=15%  Similarity=0.248  Sum_probs=57.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|++++||+++..++..    ..   . .......+..          +......+..++..||+.+|
T Consensus       195 ~~~~~~~~Di~slG~il~~l~~~~~~~~~----~~---~-~~~~~~~~~~----------~~~~~~~~~~li~~~l~~dp  256 (284)
T 2a19_B          195 SQDYGKEVDLYALGLILAELLHVCDTAFE----TS---K-FFTDLRDGII----------SDIFDKKEKTLLQKLLSKKP  256 (284)
T ss_dssp             CSCCCTHHHHHHHHHHHHHHHSCCSSHHH----HH---H-HHHHHHTTCC----------CTTSCHHHHHHHHHHTCSSG
T ss_pred             cCCCcchhhhHHHHHHHHHHHhcCCcchh----HH---H-HHHHhhcccc----------cccCCHHHHHHHHHHccCCh
Confidence            34578899999999999999999877521    11   1 1111111111          22223378889999999999


Q ss_pred             CCCCCHHHHHHHHhcccCCC
Q 047465           84 DDRPTVYDVVSMLTNEATTL  103 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~~~  103 (139)
                      .+||++.+++..|.......
T Consensus       257 ~~Rps~~e~l~~l~~~~~~~  276 (284)
T 2a19_B          257 EDRPNTSEILRTLTVWKKSP  276 (284)
T ss_dssp             GGSCCHHHHHHHHHHHTC--
T ss_pred             hhCcCHHHHHHHHHHHhhCC
Confidence            99999999999998776633

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.06  E-value=1e-10  Score=85.20  Aligned_cols=95  Identities=13%  Similarity=0.052  Sum_probs=57.2

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcC---ch----------HHHHHHHHHhhccchhhhhhhhcc--CCCCCHHHH
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTD---SL----------IFVIYYLRVANSHIFLCLWLIINL--RHGIYGRTT   71 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~---~~----------~~~~~~~~~~~~~~~~~~~~~~d~--~p~~~~~~~   71 (139)
                      ++.++||||||+++|||++|+.|+......   ..          ................   .+.+.  ........+
T Consensus       212 ~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l  288 (336)
T 3g2f_A          212 ALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRP---KFPEAWKENSLAVRSL  288 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCC---CCCTTCCCCSHHHHHH
T ss_pred             cccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCC---CCCcccccccchHHHH
Confidence            456899999999999999997765321110   00          0000000111111111   11100  000111268


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHhcccCCCC
Q 047465           72 GHWTLLCAQESADDRPTVYDVVSMLTNEATTLN  104 (139)
Q Consensus        72 ~~l~~~C~~~~p~~Rps~~~v~~~L~~~~~~~~  104 (139)
                      .+++..||+.+|.+||++.+++..|+.+...+.
T Consensus       289 ~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~  321 (336)
T 3g2f_A          289 KETIEDCWDQDAEARLTAQXAEERMAELMMIWE  321 (336)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred             HHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence            899999999999999999999999998876543

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.05  E-value=3.9e-10  Score=80.60  Aligned_cols=80  Identities=14%  Similarity=0.082  Sum_probs=53.1

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +.++.++||||+|++++++++|+.|+.....  ..   .. ..+..+....  ....  .......+..++..||+.+|.
T Consensus       197 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~---~~-~~~~~~~~~~--~~~~--~~~~~~~~~~li~~~l~~dp~  266 (287)
T 2wei_A          197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNE--YD---IL-KRVETGKYAF--DLPQ--WRTISDDAKDLIRKMLTFHPS  266 (287)
T ss_dssp             TCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HH---HH-HHHHHCCCCC--CSGG--GTTSCHHHHHHHHHHTCSSGG
T ss_pred             CCCCCchhhHhHHHHHHHHHhCCCCCCCCCH--HH---HH-HHHHcCCCCC--Cchh--hhhcCHHHHHHHHHHcccChh
Confidence            3478899999999999999999999853211  11   11 1111121110  1111  112233788999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       267 ~Rps~~ell~  276 (287)
T 2wei_A          267 LRITATQCLE  276 (287)
T ss_dssp             GSCCHHHHHH
T ss_pred             hCcCHHHHhc
Confidence            9999999986

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.05  E-value=2.2e-10  Score=82.72  Aligned_cols=80  Identities=16%  Similarity=0.235  Sum_probs=53.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|+++++|++|+.|+.....     ........ .....   ....  +......+.+++..||+.+|
T Consensus       199 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~-~~~~~---~~~~--~~~~~~~l~~li~~~l~~dp  267 (314)
T 3com_A          199 EIGYNCVADIWSLGITAIEMAEGKPPYADIHP-----MRAIFMIP-TNPPP---TFRK--PELWSDNFTDFVKQCLVKSP  267 (314)
T ss_dssp             SSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHHH-HSCCC---CCSS--GGGSCHHHHHHHHHHTCSCT
T ss_pred             CCCCCccccHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHh-cCCCc---ccCC--cccCCHHHHHHHHHHccCCh
Confidence            34578899999999999999999999853221     11111111 11111   1111  22223378899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       268 ~~Rpt~~~ll~  278 (314)
T 3com_A          268 EQRATATQLLQ  278 (314)
T ss_dssp             TTSCCHHHHTT
T ss_pred             hhCcCHHHHHh
Confidence            99999999975

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.05  E-value=5.3e-10  Score=80.51  Aligned_cols=85  Identities=12%  Similarity=0.053  Sum_probs=55.2

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|++++++++|+.|+....  ......    .+..+....  ....  +......+.+++..|++.+|
T Consensus       181 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~----~i~~~~~~~--~~~~--~~~~~~~~~~li~~~l~~dp  250 (304)
T 2jam_A          181 QKPYSKAVDCWSIGVITYILLCGYPPFYEET--ESKLFE----KIKEGYYEF--ESPF--WDDISESAKDFICHLLEKDP  250 (304)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHH----HHHHCCCCC--CTTT--TTTSCHHHHHHHHHHHCSST
T ss_pred             cCCCCchhhHHHHHHHHHHHHHCCCCCCCCC--HHHHHH----HHHcCCCCC--Cccc--cccCCHHHHHHHHHHcCCCh
Confidence            4567889999999999999999999985321  111111    111111100  0000  11122378899999999999


Q ss_pred             CCCCCHHHHHH--HHhc
Q 047465           84 DDRPTVYDVVS--MLTN   98 (139)
Q Consensus        84 ~~Rps~~~v~~--~L~~   98 (139)
                      .+||++.+++.  ++..
T Consensus       251 ~~Rps~~~~l~h~~~~~  267 (304)
T 2jam_A          251 NERYTCEKALSHPWIDG  267 (304)
T ss_dssp             TTSCCHHHHHTSHHHHS
T ss_pred             hHCcCHHHHhcCccccC
Confidence            99999999986  4444

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.04  E-value=3.4e-10  Score=80.70  Aligned_cols=77  Identities=16%  Similarity=0.079  Sum_probs=53.3

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|++++++++|+.|+.....     ......... ...    .+    |......+..++..|++.+|
T Consensus       186 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~~~-~~~----~~----~~~~~~~~~~li~~~l~~~p  251 (284)
T 2vgo_A          186 GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH-----TETHRRIVN-VDL----KF----PPFLSDGSKDLISKLLRYHP  251 (284)
T ss_dssp             TCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHHT-TCC----CC----CTTSCHHHHHHHHHHSCSSG
T ss_pred             cCCCCcccchhhHHHHHHHHHHCCCCCCCCCH-----hHHHHHHhc-ccc----CC----CCcCCHHHHHHHHHHhhcCH
Confidence            34678899999999999999999999853221     111111111 111    11    22223378899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       252 ~~Rps~~~ll~  262 (284)
T 2vgo_A          252 PQRLPLKGVME  262 (284)
T ss_dssp             GGSCCHHHHHT
T ss_pred             hhCCCHHHHhh
Confidence            99999999985

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.04  E-value=5.3e-10  Score=80.33  Aligned_cols=79  Identities=16%  Similarity=0.130  Sum_probs=53.8

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDR   86 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~R   86 (139)
                      ++.++||||+|++++|+++|+.|+.....     .... ..+..+..    .+    +......+.+++..||+.+|.+|
T Consensus       190 ~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~-~~i~~~~~----~~----~~~~~~~l~~li~~~l~~dp~~R  255 (305)
T 2wtk_C          190 SGFKVDIWSAGVTLYNITTGLYPFEGDNI-----YKLF-ENIGKGSY----AI----PGDCGPPLSDLLKGMLEYEPAKR  255 (305)
T ss_dssp             ESHHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHH-HHHHHCCC----CC----CSSSCHHHHHHHHHHTCSSTTTS
T ss_pred             CcchhhHHHHHHHHHHHHhCCCCCCCchH-----HHHH-HHHhcCCC----CC----CCccCHHHHHHHHHHccCChhhC
Confidence            36789999999999999999999853211     1111 11111111    11    22233478899999999999999


Q ss_pred             CCHHHHHH--HHhcc
Q 047465           87 PTVYDVVS--MLTNE   99 (139)
Q Consensus        87 ps~~~v~~--~L~~~   99 (139)
                      |++.++++  ++.+.
T Consensus       256 ps~~~ll~~~~~~~~  270 (305)
T 2wtk_C          256 FSIRQIRQHSWFRKK  270 (305)
T ss_dssp             CCHHHHHHSHHHHSC
T ss_pred             CCHHHHhcCcccccC
Confidence            99999986  45544

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.04  E-value=2.8e-10  Score=83.10  Aligned_cols=81  Identities=14%  Similarity=0.044  Sum_probs=52.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|+++++|++|+.||....  .......+.. .......   ..    .......+.+++..||+.+|
T Consensus       191 ~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~~~~~-~~~~~~~---~~----~~~~~~~~~~li~~~L~~dP  260 (326)
T 2y0a_A          191 YEPLGLEADMWSIGVITYILLSGASPFLGDT--KQETLANVSA-VNYEFED---EY----FSNTSALAKDFIRRLLVKDP  260 (326)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS--HHHHHHHHHH-TCCCCCH---HH----HTTSCHHHHHHHHHHSCSSG
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC--HHHHHHHHHh-cCCCcCc---cc----cccCCHHHHHHHHHHccCCh
Confidence            4567889999999999999999999985321  1111111110 0000001   11    11112277889999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       261 ~~Rpt~~e~l~  271 (326)
T 2y0a_A          261 KKRMTIQDSLQ  271 (326)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hhCCCHHHHhc
Confidence            99999999986

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.04  E-value=2.1e-10  Score=81.21  Aligned_cols=77  Identities=13%  Similarity=0.114  Sum_probs=50.9

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDR   86 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~R   86 (139)
                      ++.++||||+|++++|+++|+.|+............+.    ......   .  .  .......+.+++..||+.+|.+|
T Consensus       185 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~~---~--~--~~~~~~~~~~li~~~l~~~p~~R  253 (276)
T 2yex_A          185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK----EKKTYL---N--P--WKKIDSAPLALLHKILVENPSAR  253 (276)
T ss_dssp             CHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHH----TTCTTS---T--T--GGGSCHHHHHHHHHHSCSSTTTS
T ss_pred             CCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhh----hccccc---C--c--hhhcCHHHHHHHHHHCCCCchhC
Confidence            36789999999999999999999864332212211111    111110   0  0  11122378899999999999999


Q ss_pred             CCHHHHHH
Q 047465           87 PTVYDVVS   94 (139)
Q Consensus        87 ps~~~v~~   94 (139)
                      |++.+++.
T Consensus       254 ps~~~il~  261 (276)
T 2yex_A          254 ITIPDIKK  261 (276)
T ss_dssp             CCHHHHTT
T ss_pred             CCHHHHhc
Confidence            99998864

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.04  E-value=4.9e-10  Score=83.16  Aligned_cols=79  Identities=11%  Similarity=0.105  Sum_probs=51.6

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      .++.++||||+|+++|||++|+.||....  ......   . +..+....  ....  .......+..++..|++.+|.+
T Consensus       281 ~~~~~~Di~slG~il~ell~g~~pf~~~~--~~~~~~---~-i~~~~~~~--~~~~--~~~~~~~~~~li~~~L~~dP~~  350 (365)
T 2y7j_A          281 GYGKEVDLWACGVILFTLLAGSPPFWHRR--QILMLR---M-IMEGQYQF--SSPE--WDDRSSTVKDLISRLLQVDPEA  350 (365)
T ss_dssp             CBCTTHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHH---H-HHHTCCCC--CHHH--HSSSCHHHHHHHHHHSCSSTTT
T ss_pred             CCCchhhHHhHHHHHHHHHHCCCCCCCCC--HHHHHH---H-HHhCCCCC--CCcc--cccCCHHHHHHHHHHcCCChhH
Confidence            57889999999999999999999985321  111111   1 11111100  0000  1111226889999999999999


Q ss_pred             CCCHHHHHH
Q 047465           86 RPTVYDVVS   94 (139)
Q Consensus        86 Rps~~~v~~   94 (139)
                      ||++.+++.
T Consensus       351 Rps~~ell~  359 (365)
T 2y7j_A          351 RLTAEQALQ  359 (365)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHhc
Confidence            999999976

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.04  E-value=2.8e-10  Score=89.43  Aligned_cols=81  Identities=14%  Similarity=-0.002  Sum_probs=54.3

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccc-hhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHI-FLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      .+..|+.++||||+||++|||++|+.||.....  ..   .......... ..   ...   .......+.+|+.+||+.
T Consensus       329 ~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~--~~---~~~~i~~~~~~~~---~~~---~~~~s~~~~dli~~~L~~  397 (573)
T 3uto_A          329 EGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND--DE---TLRNVKSCDWNMD---DSA---FSGISEDGKDFIRKLLLA  397 (573)
T ss_dssp             TTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HH---HHHHHHTTCCCCC---SGG---GTTSCHHHHHHHHTTSCS
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HH---HHHHHHhCCCCCC---ccc---ccCCCHHHHHHHHHHccC
Confidence            355688999999999999999999999863221  11   1111111111 11   000   111223788999999999


Q ss_pred             CCCCCCCHHHHHH
Q 047465           82 SADDRPTVYDVVS   94 (139)
Q Consensus        82 ~p~~Rps~~~v~~   94 (139)
                      ||.+||++.++++
T Consensus       398 dp~~R~t~~e~l~  410 (573)
T 3uto_A          398 DPNTRMTIHQALE  410 (573)
T ss_dssp             SGGGSCCHHHHHH
T ss_pred             ChhHCcCHHHHhc
Confidence            9999999999986

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.04  E-value=2e-10  Score=91.50  Aligned_cols=83  Identities=20%  Similarity=0.137  Sum_probs=58.3

Q ss_pred             CCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ..++.++||||||+++|||++ |..||.....  ....    ..+..+...   ..    +......+.+++..||+.+|
T Consensus       567 ~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~--~~~~----~~i~~~~~~---~~----~~~~~~~l~~li~~~l~~dP  633 (656)
T 2j0j_A          567 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--NDVI----GRIENGERL---PM----PPNCPPTLYSLMTKCWAYDP  633 (656)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHH----HHHHHTCCC---CC----CTTCCHHHHHHHHHHTCSSG
T ss_pred             CCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH--HHHH----HHHHcCCCC---CC----CccccHHHHHHHHHHcCCCh
Confidence            467889999999999999997 8888753221  1111    112122211   11    22333488999999999999


Q ss_pred             CCCCCHHHHHHHHhccc
Q 047465           84 DDRPTVYDVVSMLTNEA  100 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~  100 (139)
                      .+||++.+++..|+++.
T Consensus       634 ~~RPs~~el~~~L~~il  650 (656)
T 2j0j_A          634 SRRPRFTELKAQLSTIL  650 (656)
T ss_dssp             GGSCCHHHHHHHHHHHH
T ss_pred             hHCcCHHHHHHHHHHHH
Confidence            99999999999998754

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.03  E-value=2e-10  Score=83.80  Aligned_cols=85  Identities=16%  Similarity=0.123  Sum_probs=54.7

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++||||+|+++++|++|+.||....  ......   ......... .....   +. ....+.+++..|+..+|.
T Consensus       178 ~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~---~i~~~~~~~-~~~~~---~~-~s~~~~~li~~~L~~dp~  247 (321)
T 1tki_A          178 DVVSTATDMWSLGTLVYVLLSGINPFLAET--NQQIIE---NIMNAEYTF-DEEAF---KE-ISIEAMDFVDRLLVKERK  247 (321)
T ss_dssp             CEECHHHHHHHHHHHHHHHHHSSCTTCCSS--HHHHHH---HHHHTCCCC-CHHHH---TT-SCHHHHHHHHTTSCSSGG
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCcCCC--HHHHHH---HHHcCCCCC-Chhhh---cc-CCHHHHHHHHHHcCCChh
Confidence            346889999999999999999999985321  111111   111111110 00000   11 122788999999999999


Q ss_pred             CCCCHHHHHH--HHhcc
Q 047465           85 DRPTVYDVVS--MLTNE   99 (139)
Q Consensus        85 ~Rps~~~v~~--~L~~~   99 (139)
                      +||++.++++  ++.+.
T Consensus       248 ~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          248 SRMTASEALQHPWLKQK  264 (321)
T ss_dssp             GSCCHHHHHHSHHHHSC
T ss_pred             HCcCHHHHhcChhhccC
Confidence            9999999987  45443

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.02  E-value=3.1e-10  Score=85.32  Aligned_cols=85  Identities=12%  Similarity=-0.001  Sum_probs=55.1

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCc--hHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDS--LIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQ   80 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~   80 (139)
                      .++.++.++||||||+++|||++|+.||.......  ......+.   ......   ....  .......+.+++..||+
T Consensus       236 ~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~---~~~~~~---~~~~--~~~~s~~~~~li~~~L~  307 (400)
T 1nxk_A          236 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR---MGQYEF---PNPE--WSEVSEEVKMLIRNLLK  307 (400)
T ss_dssp             CCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH---HTCCCC---CTTT--TTTSCHHHHHHHHTTSC
T ss_pred             CCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH---cCcccC---CCcc--cccCCHHHHHHHHHHCC
Confidence            35678899999999999999999999985432211  01111111   111100   0000  11122378999999999


Q ss_pred             cCCCCCCCHHHHHHH
Q 047465           81 ESADDRPTVYDVVSM   95 (139)
Q Consensus        81 ~~p~~Rps~~~v~~~   95 (139)
                      .+|.+||++.+++..
T Consensus       308 ~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          308 TEPTQRMTITEFMNH  322 (400)
T ss_dssp             SSGGGSCCHHHHHHS
T ss_pred             CChhHCcCHHHHhcC
Confidence            999999999999873

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.02  E-value=7.1e-10  Score=84.58  Aligned_cols=81  Identities=9%  Similarity=-0.001  Sum_probs=53.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|+++++|++|..||....  ......    .+..+...    ............+.+++..|++.||
T Consensus       187 ~~~~~~~~DIwSlGvilyell~G~~Pf~~~~--~~~~~~----~i~~~~~~----~~~~~~~~~s~~~~~li~~~L~~dP  256 (444)
T 3soa_A          187 KDPYGKPVDLWACGVILYILLVGYPPFWDED--QHRLYQ----QIKAGAYD----FPSPEWDTVTPEAKDLINKMLTINP  256 (444)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHH----HHHHTCCC----CCTTTTTTSCHHHHHHHHHHSCSST
T ss_pred             CCCCCCccccHHHHHHHHHHHhCCCCCCCcc--HHHHHH----HHHhCCCC----CCccccccCCHHHHHHHHHHcCCCh
Confidence            4468899999999999999999999985321  111111    11111111    0000001122378899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.++++
T Consensus       257 ~~Rpta~e~L~  267 (444)
T 3soa_A          257 SKRITAAEALK  267 (444)
T ss_dssp             TTSCCHHHHHH
T ss_pred             hHCCCHHHHhc
Confidence            99999999986

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.02  E-value=2.5e-10  Score=82.17  Aligned_cols=78  Identities=18%  Similarity=0.343  Sum_probs=53.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||||++++++++|+.|+.....  ....    .........   .+    +......+..++..||+.+|
T Consensus       193 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~----~~~~~~~~~---~~----~~~~~~~l~~li~~~l~~dp  259 (303)
T 3a7i_A          193 QSAYDSKADIWSLGITAIELARGEPPHSELHP--MKVL----FLIPKNNPP---TL----EGNYSKPLKEFVEACLNKEP  259 (303)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHH----HHHHHSCCC---CC----CSSCCHHHHHHHHHHCCSSG
T ss_pred             cCCCCchhhhHHHHHHHHHHccCCCCCCCcCH--HHHH----HHhhcCCCC---CC----ccccCHHHHHHHHHHcCCCh
Confidence            45678899999999999999999999853221  1111    111111111   11    22223378899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       260 ~~Rps~~~ll~  270 (303)
T 3a7i_A          260 SFRPTAKELLK  270 (303)
T ss_dssp             GGSCCHHHHTT
T ss_pred             hhCcCHHHHhh
Confidence            99999999975

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.02  E-value=4.4e-10  Score=80.71  Aligned_cols=76  Identities=9%  Similarity=0.017  Sum_probs=50.5

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDR   86 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~R   86 (139)
                      ++.++||||+|++++||++|+.||....  .   .... ..+.....    ...+  .......+.+++.+||+.+|.+|
T Consensus       217 ~~~~~Di~slG~~l~~l~~g~~pf~~~~--~---~~~~-~~~~~~~~----~~~~--~~~~~~~l~~li~~~l~~dp~~R  284 (298)
T 2zv2_A          217 SGKALDVWAMGVTLYCFVFGQCPFMDER--I---MCLH-SKIKSQAL----EFPD--QPDIAEDLKDLITRMLDKNPESR  284 (298)
T ss_dssp             ESHHHHHHHHHHHHHHHHHSSCSSCCSS--H---HHHH-HHHHHCCC----CCCS--SSCCCHHHHHHHHHHTCSCTTTS
T ss_pred             CCchhhhHhHHHHHHHHHHCCCCCCCcc--H---HHHH-HHHhcccC----CCCC--ccccCHHHHHHHHHHhhcChhhC
Confidence            3678899999999999999999985321  1   1111 11111111    1111  12223378999999999999999


Q ss_pred             CCHHHHHH
Q 047465           87 PTVYDVVS   94 (139)
Q Consensus        87 ps~~~v~~   94 (139)
                      |++.+++.
T Consensus       285 ~s~~e~l~  292 (298)
T 2zv2_A          285 IVVPEIKL  292 (298)
T ss_dssp             CCHHHHTT
T ss_pred             CCHHHHhc
Confidence            99999864

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.01  E-value=4.1e-10  Score=80.06  Aligned_cols=86  Identities=10%  Similarity=0.001  Sum_probs=54.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ++.++.++||||+|++++++++|+.|+.....  ...   . ..+...........    .......+.+++..||+.+|
T Consensus       185 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~---~-~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~dp  254 (283)
T 3bhy_A          185 YEPLGLEADMWSIGVITYILLSGASPFLGETK--QET---L-TNISAVNYDFDEEY----FSNTSELAKDFIRRLLVKDP  254 (283)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH--HHH---H-HHHHTTCCCCCHHH----HTTCCHHHHHHHHTTSCSSG
T ss_pred             CCCCCcchhhhhHHHHHHHHHHCCCCCCCcch--HHH---H-HHhHhcccCCcchh----cccCCHHHHHHHHHHccCCH
Confidence            45678899999999999999999999853221  111   1 11111110000011    11112278899999999999


Q ss_pred             CCCCCHHHHHH--HHhcc
Q 047465           84 DDRPTVYDVVS--MLTNE   99 (139)
Q Consensus        84 ~~Rps~~~v~~--~L~~~   99 (139)
                      .+||++.+++.  +++..
T Consensus       255 ~~Rps~~~~l~h~~~~~~  272 (283)
T 3bhy_A          255 KRRMTIAQSLEHSWIKAI  272 (283)
T ss_dssp             GGSCCHHHHHHCHHHHHH
T ss_pred             hHCcCHHHHHhCHHHHHH
Confidence            99999999986  34443

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.01  E-value=5e-10  Score=79.48  Aligned_cols=80  Identities=16%  Similarity=0.070  Sum_probs=51.9

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +.++.++||||+|++++++++|+.|+.....  ..   .... +..+.... +...   .......+.+++..|++.+|.
T Consensus       182 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~---~~~~-~~~~~~~~-~~~~---~~~~~~~~~~li~~~l~~dp~  251 (277)
T 3f3z_A          182 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTD--SE---VMLK-IREGTFTF-PEKD---WLNVSPQAESLIRRLLTKSPK  251 (277)
T ss_dssp             TCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HH---HHHH-HHHCCCCC-CHHH---HTTSCHHHHHHHHHHTCSSTT
T ss_pred             ccCCchhhehhHHHHHHHHHHCCCCCCCCCH--HH---HHHH-HHhCCCCC-Cchh---hhcCCHHHHHHHHHHccCChh
Confidence            3478899999999999999999999853221  11   1111 11111110 0000   001223788999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       252 ~R~s~~~~l~  261 (277)
T 3f3z_A          252 QRITSLQALE  261 (277)
T ss_dssp             TSCCHHHHTT
T ss_pred             hCcCHHHHhc
Confidence            9999999874

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.01  E-value=1.2e-10  Score=82.77  Aligned_cols=77  Identities=14%  Similarity=0.159  Sum_probs=48.2

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|++++|+++|+.|+......  .   ........       ....  |......+.+++..||+.+|
T Consensus       186 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~---~~~~~~~~-------~~~~--~~~~~~~~~~li~~~l~~dp  251 (278)
T 3cok_A          186 RSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK--N---TLNKVVLA-------DYEM--PSFLSIEAKDLIHQLLRRNP  251 (278)
T ss_dssp             ------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------CCSS-------CCCC--CTTSCHHHHHHHHHHSCSSG
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH--H---HHHHHhhc-------ccCC--ccccCHHHHHHHHHHcccCH
Confidence            345678999999999999999999998532211  0   01010100       1111  33333478899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       252 ~~Rps~~~~l~  262 (278)
T 3cok_A          252 ADRLSLSSVLD  262 (278)
T ss_dssp             GGSCCHHHHTT
T ss_pred             hhCCCHHHHhc
Confidence            99999998854

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.01  E-value=6.3e-10  Score=82.07  Aligned_cols=82  Identities=11%  Similarity=0.092  Sum_probs=53.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||||+++|||++|+.|+..... ...    ....+......    ............+.+++..|++.+|
T Consensus       224 ~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~----~~~~i~~~~~~----~~~~~~~~~~~~~~~li~~~L~~dP  294 (349)
T 2w4o_A          224 GCAYGPEVDMWSVGIITYILLCGFEPFYDERG-DQF----MFRRILNCEYY----FISPWWDEVSLNAKDLVRKLIVLDP  294 (349)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC-HHH----HHHHHHTTCCC----CCTTTTTTSCHHHHHHHHTTSCSSG
T ss_pred             CCCCCcccchHHHHHHHHHHHhCCCCCCCCcc-cHH----HHHHHHhCCCc----cCCchhhhCCHHHHHHHHHHccCCh
Confidence            45688999999999999999999999853222 111    11111111111    0000001122378899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       295 ~~Rpt~~e~l~  305 (349)
T 2w4o_A          295 KKRLTTFQALQ  305 (349)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hhCcCHHHHhc
Confidence            99999999876

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.01  E-value=8e-11  Score=87.34  Aligned_cols=85  Identities=6%  Similarity=-0.175  Sum_probs=52.5

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++||||+|+++|||++|+.||........................   ....  .......+.+++..||+.+|.
T Consensus       268 ~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~li~~~L~~dP~  342 (371)
T 3q60_A          268 ATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSL---AFGS--CTPLPDFVKTLIGRFLNFDRR  342 (371)
T ss_dssp             EECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSC---CCTT--SSCCCHHHHHHHHHHTCSSTT
T ss_pred             CCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhcccccc---chhh--ccCCCHHHHHHHHHHcCCChh
Confidence            45789999999999999999999998643221000000000000000000   0000  112234889999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       343 ~Rpt~~e~l~  352 (371)
T 3q60_A          343 RRLLPLEAME  352 (371)
T ss_dssp             TCCCHHHHTT
T ss_pred             hCCCHHHHhc
Confidence            9999999864

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.01  E-value=7.6e-10  Score=80.40  Aligned_cols=81  Identities=12%  Similarity=0.043  Sum_probs=52.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|++++++++|+.|+.....  ...   ... +....... ....   +......+.+++..|++.+|
T Consensus       192 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~---~~~-i~~~~~~~-~~~~---~~~~~~~~~~li~~~l~~dp  261 (321)
T 2a2a_A          192 YEPLGLEADMWSIGVITYILLSGASPFLGDTK--QET---LAN-ITSVSYDF-DEEF---FSHTSELAKDFIRKLLVKET  261 (321)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHH---HHH-HHTTCCCC-CHHH---HTTCCHHHHHHHHTTSCSST
T ss_pred             CCCCCCccccHHHHHHHHHHHHCCCCCCCCCH--HHH---HHH-HHhccccc-Chhh---hcccCHHHHHHHHHHcCCCh
Confidence            45678899999999999999999999853211  111   111 11111000 0000   11122378899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       262 ~~Rps~~e~l~  272 (321)
T 2a2a_A          262 RKRLTIQEALR  272 (321)
T ss_dssp             TTSCCHHHHHH
T ss_pred             hhCcCHHHHhc
Confidence            99999999976

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.01  E-value=6e-10  Score=80.80  Aligned_cols=79  Identities=14%  Similarity=0.263  Sum_probs=52.0

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ++.++.++||||+|+++|++++|+.|+.....  .   ........ ....   ...   +......+..++..||..+|
T Consensus       208 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~---~~~~~~~~-~~~~---~~~---~~~~~~~l~~li~~~l~~dp  275 (326)
T 2x7f_A          208 DATYDFKSDLWSLGITAIEMAEGAPPLCDMHP--M---RALFLIPR-NPAP---RLK---SKKWSKKFQSFIESCLVKNH  275 (326)
T ss_dssp             ---CCTTHHHHHHHHHHHHHHHSSCTTTTSCH--H---HHHHHHHH-SCCC---CCS---CSCSCHHHHHHHHHHCCSSG
T ss_pred             CcCCCccchHHHHHHHHHHHHhCCCCCCCCcH--H---HHHHHhhc-Cccc---cCC---ccccCHHHHHHHHHHhccCh
Confidence            34678899999999999999999999853221  1   11111111 1111   111   22223478899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       276 ~~Rps~~~ll~  286 (326)
T 2x7f_A          276 SQRPATEQLMK  286 (326)
T ss_dssp             GGSCCHHHHHT
T ss_pred             hhCCCHHHHhh
Confidence            99999999976

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.01  E-value=4.6e-10  Score=83.66  Aligned_cols=81  Identities=12%  Similarity=-0.006  Sum_probs=53.2

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ++.++.++||||||++++||++|+.||.....  ..   ............   ....  .......+.+++..|++.+|
T Consensus       262 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~--~~---~~~~i~~~~~~~---~~~~--~~~~~~~~~~li~~~L~~dp  331 (373)
T 2x4f_A          262 YDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND--AE---TLNNILACRWDL---EDEE--FQDISEEAKEFISKLLIKEK  331 (373)
T ss_dssp             TCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH--HH---HHHHHHHTCCCS---CSGG--GTTSCHHHHHHHHTTSCSSG
T ss_pred             CCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH--HH---HHHHHHhccCCC---Chhh--hccCCHHHHHHHHHHcCCCh
Confidence            35578899999999999999999999853221  11   111111111100   0000  11122378899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       332 ~~Rps~~e~l~  342 (373)
T 2x4f_A          332 SWRISASEALK  342 (373)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hhCCCHHHHhc
Confidence            99999999986

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.01  E-value=8.4e-10  Score=80.15  Aligned_cols=82  Identities=15%  Similarity=0.041  Sum_probs=53.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ...++.++||||+|++++++++|+.|+...... ..+...+    ..+.....+...    ......+.+++..||+.+|
T Consensus       193 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~----~~~~~~~~~~~~----~~~~~~~~~li~~~l~~dP  263 (322)
T 2ycf_A          193 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ-VSLKDQI----TSGKYNFIPEVW----AEVSEKALDLVKKLLVVDP  263 (322)
T ss_dssp             TTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS-SCHHHHH----HHTCCCCCHHHH----TTSCHHHHHHHHHHSCSST
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCcccchH-HHHHHHH----HhCccccCchhh----hhcCHHHHHHHHHHcccCH
Confidence            356788999999999999999999998643221 1111111    111111000111    1112278899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       264 ~~Rps~~~~l~  274 (322)
T 2ycf_A          264 KARFTTEEALR  274 (322)
T ss_dssp             TTSCCHHHHHT
T ss_pred             hhCCCHHHHhh
Confidence            99999999874

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.00  E-value=2.8e-10  Score=81.53  Aligned_cols=77  Identities=22%  Similarity=0.316  Sum_probs=53.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|++++++++|+.|+.....     ........ ....    .+    |......+.+++..||+.+|
T Consensus       189 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~-~~~~----~~----~~~~~~~~~~li~~~l~~~p  254 (294)
T 2rku_A          189 KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-----KETYLRIK-KNEY----SI----PKHINPVAASLIQKMLQTDP  254 (294)
T ss_dssp             TSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHH-TTCC----CC----CTTSCHHHHHHHHHHTCSSG
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHh-hccC----CC----ccccCHHHHHHHHHHcccCh
Confidence            34577899999999999999999999853221     11111111 1111    11    22233378899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       255 ~~Rps~~~ll~  265 (294)
T 2rku_A          255 TARPTINELLN  265 (294)
T ss_dssp             GGSCCGGGGGG
T ss_pred             hhCcCHHHHhh
Confidence            99999999986

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.00  E-value=5.7e-10  Score=82.30  Aligned_cols=80  Identities=13%  Similarity=0.077  Sum_probs=52.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|+++++|++|+.||...   ......   .... +.....+..    .......+.+++..||+.+|
T Consensus       207 ~~~~~~~~DiwslG~il~~ll~g~~pf~~~---~~~~~~---~i~~-~~~~~~~~~----~~~~s~~~~~li~~~L~~dP  275 (351)
T 3c0i_A          207 REPYGKPVDVWGCGVILFILLSGCLPFYGT---KERLFE---GIIK-GKYKMNPRQ----WSHISESAKDLVRRMLMLDP  275 (351)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHHSSCSSCSS---HHHHHH---HHHH-TCCCCCHHH----HTTSCHHHHHHHHHHTCSST
T ss_pred             CCCCCchHhhHHHHHHHHHHHHCCCCCCCc---HHHHHH---HHHc-CCCCCCccc----cccCCHHHHHHHHHHCCCCh
Confidence            446789999999999999999999998532   111111   1111 111000000    01112378899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       276 ~~R~s~~e~l~  286 (351)
T 3c0i_A          276 AERITVYEALN  286 (351)
T ss_dssp             TTSCCHHHHHT
T ss_pred             hHCcCHHHHhc
Confidence            99999999985

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.00  E-value=1.8e-10  Score=83.75  Aligned_cols=83  Identities=14%  Similarity=0.231  Sum_probs=50.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||||+++++|++|+.|+......    ...... ...+...   .+...........+..++..||+.+|
T Consensus       203 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~-~~~~~~~---~~~~~~~~~~~~~l~~li~~~l~~dp  274 (327)
T 3aln_A          203 RQGYDVRSDVWSLGITLYELATGRFPYPKWNSV----FDQLTQ-VVKGDPP---QLSNSEEREFSPSFINFVNLCLTKDE  274 (327)
T ss_dssp             ---CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------CC-CCCSCCC---CCCCCSSCCCCHHHHHHHHHHTCSSG
T ss_pred             cCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH----HHHHHH-HhcCCCC---CCCCcccccCCHHHHHHHHHHhhCCh
Confidence            345788999999999999999999998632110    011100 1111111   11100011223378999999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       275 ~~Rps~~ell~  285 (327)
T 3aln_A          275 SKRPKYKELLK  285 (327)
T ss_dssp             GGSCCHHHHTT
T ss_pred             hhCcCHHHHHh
Confidence            99999999975

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.00  E-value=2.7e-10  Score=82.57  Aligned_cols=75  Identities=15%  Similarity=0.154  Sum_probs=51.2

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +.++.++||||||+++|||++|..++..     ...    ...+..+...   ....  +. ....+.+++..|++.+|.
T Consensus       230 ~~~~~~~DiwslG~il~el~~g~~~~~~-----~~~----~~~~~~~~~~---~~~~--~~-~~~~l~~li~~~L~~dP~  294 (311)
T 3p1a_A          230 GSYGTAADVFSLGLTILEVACNMELPHG-----GEG----WQQLRQGYLP---PEFT--AG-LSSELRSVLVMMLEPDPK  294 (311)
T ss_dssp             TCCSTHHHHHHHHHHHHHHHHTCCCCSS-----HHH----HHHHTTTCCC---HHHH--TT-SCHHHHHHHHHHSCSSTT
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCC-----ccH----HHHHhccCCC---cccc--cC-CCHHHHHHHHHHcCCChh
Confidence            3678899999999999999999766531     111    1112222222   1111  22 223788999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       295 ~Rpt~~ell~  304 (311)
T 3p1a_A          295 LRATAEALLA  304 (311)
T ss_dssp             TSCCHHHHHT
T ss_pred             hCcCHHHHHh
Confidence            9999999875

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.00  E-value=8.6e-10  Score=84.63  Aligned_cols=80  Identities=15%  Similarity=0.106  Sum_probs=53.1

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +.++.++||||+|+++|+|++|+.||....  ......   . +..+....  ....  .......+.+++..||+.+|.
T Consensus       197 ~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~---~-i~~~~~~~--~~~~--~~~~s~~~~~li~~~L~~dp~  266 (486)
T 3mwu_A          197 GTYDEKCDVWSAGVILYILLSGTPPFYGKN--EYDILK---R-VETGKYAF--DLPQ--WRTISDDAKDLIRKMLTFHPS  266 (486)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHH---H-HHHTCCCS--CSGG--GGGSCHHHHHHHHHHTCSSTT
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHH---H-HHhCCCCC--CCcc--cCCCCHHHHHHHHHHcCCChh
Confidence            457889999999999999999999985321  111111   1 11111110  1100  111223788999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       267 ~R~t~~~~l~  276 (486)
T 3mwu_A          267 LRITATQCLE  276 (486)
T ss_dssp             TSCCHHHHHH
T ss_pred             hCcCHHHHhc
Confidence            9999999986

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=98.99  E-value=7.1e-10  Score=78.58  Aligned_cols=73  Identities=19%  Similarity=0.253  Sum_probs=50.9

Q ss_pred             CccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCCC
Q 047465            8 SIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRP   87 (139)
Q Consensus         8 s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~Rp   87 (139)
                      +.++||||+|++++++++|+.|+....  ...    ....+..+..    .+    |......+..++..|++.+|.+||
T Consensus       189 ~~~~Di~slG~~l~~l~~g~~p~~~~~--~~~----~~~~~~~~~~----~~----~~~~~~~l~~li~~~l~~~p~~Rp  254 (276)
T 2h6d_A          189 GPEVDIWSCGVILYALLCGTLPFDDEH--VPT----LFKKIRGGVF----YI----PEYLNRSVATLLMHMLQVDPLKRA  254 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCSSCCSS--HHH----HHHHHHHCCC----CC----CTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             CccchHHHHHHHHHHHHhCCCCCCCCc--HHH----HHHHhhcCcc----cC----chhcCHHHHHHHHHHccCChhhCC
Confidence            578999999999999999999985321  111    1111111111    11    222334788999999999999999


Q ss_pred             CHHHHHH
Q 047465           88 TVYDVVS   94 (139)
Q Consensus        88 s~~~v~~   94 (139)
                      ++.+++.
T Consensus       255 s~~~~l~  261 (276)
T 2h6d_A          255 TIKDIRE  261 (276)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHh
Confidence            9999986

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=98.99  E-value=5e-10  Score=80.19  Aligned_cols=80  Identities=14%  Similarity=0.127  Sum_probs=51.9

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++||||+|++++++++|+.|+....  ...   ............   ....  .......+.+++..||+.+|.
T Consensus       204 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--~~~---~~~~~~~~~~~~---~~~~--~~~~~~~l~~li~~~l~~dp~  273 (298)
T 1phk_A          204 PGYGKEVDMWSTGVIMYTLLAGSPPFWHRK--QML---MLRMIMSGNYQF---GSPE--WDDYSDTVKDLVSRFLVVQPQ  273 (298)
T ss_dssp             CCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHH---HHHHHHHTCCCC---CTTT--GGGSCHHHHHHHHHHCCSSGG
T ss_pred             ccCCcccccHhHHHHHHHHHHCCCCCcCcc--HHH---HHHHHhcCCccc---Cccc--ccccCHHHHHHHHHHccCCcc
Confidence            457889999999999999999999985321  111   111111111110   0000  111223788999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       274 ~Rps~~~ll~  283 (298)
T 1phk_A          274 KRYTAEEALA  283 (298)
T ss_dssp             GSCCHHHHTT
T ss_pred             cCCCHHHHHh
Confidence            9999999864

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=98.99  E-value=3.5e-10  Score=82.80  Aligned_cols=76  Identities=22%  Similarity=0.305  Sum_probs=52.5

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++||||||+++|+|++|+.|+.....     ............     .+    +......+..++..||+.+|.
T Consensus       216 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~~~-----~~----~~~~~~~~~~li~~~l~~dp~  281 (335)
T 2owb_A          216 KGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-----KETYLRIKKNEY-----SI----PKHINPVAASLIQKMLQTDPT  281 (335)
T ss_dssp             SCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHHHTCC-----CC----CTTSCHHHHHHHHHHTCSSGG
T ss_pred             CCCCchhhHHHHHHHHHHHHHCcCCCCCCCH-----HHHHHHHhcCCC-----CC----CccCCHHHHHHHHHHccCChh
Confidence            4567899999999999999999999853211     111111111111     11    222333788999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       282 ~Rps~~ell~  291 (335)
T 2owb_A          282 ARPTINELLN  291 (335)
T ss_dssp             GSCCGGGGGG
T ss_pred             HCcCHHHHhc
Confidence            9999999986

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=98.99  E-value=4.6e-10  Score=83.30  Aligned_cols=81  Identities=11%  Similarity=0.000  Sum_probs=52.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|+++|+|++|+.||....  ......   . +..+....  ....  .......+.+++..||+.+|
T Consensus       204 ~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~--~~~~~~---~-i~~~~~~~--~~~~--~~~~~~~~~~li~~~L~~dP  273 (362)
T 2bdw_A          204 KDPYSKPVDIWACGVILYILLVGYPPFWDED--QHRLYA---Q-IKAGAYDY--PSPE--WDTVTPEAKSLIDSMLTVNP  273 (362)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHH---H-HHHTCCCC--CTTG--GGGSCHHHHHHHHHHSCSSG
T ss_pred             cCCCCchhhHHHHHHHHHHHHHCCCCCCCCC--HHHHHH---H-HHhCCCCC--Cccc--ccCCCHHHHHHHHHHcCCCh
Confidence            3468899999999999999999999985321  111111   1 11111100  0000  01112378899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       274 ~~R~t~~e~l~  284 (362)
T 2bdw_A          274 KKRITADQALK  284 (362)
T ss_dssp             GGSCCHHHHTT
T ss_pred             hhCcCHHHHhc
Confidence            99999999875

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=98.99  E-value=1.2e-09  Score=80.38  Aligned_cols=78  Identities=13%  Similarity=0.110  Sum_probs=53.8

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .+..++.++|+||+|++++||++|+.||....  ....   ...........         |......+..++..|++.+
T Consensus       178 ~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--~~~~---~~~i~~~~~~~---------p~~~s~~~~~li~~lL~~d  243 (337)
T 1o6l_A          178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--HERL---FELILMEEIRF---------PRTLSPEAKSLLAGLLKKD  243 (337)
T ss_dssp             SSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS--HHHH---HHHHHHCCCCC---------CTTSCHHHHHHHHHHTCSS
T ss_pred             cCCCCCchhhcccchhHHHHHhcCCCCCCCCC--HHHH---HHHHHcCCCCC---------CCCCCHHHHHHHHHHhhcC
Confidence            34568899999999999999999999985321  1111   11111111111         3333347889999999999


Q ss_pred             CCCCC-----CHHHHHH
Q 047465           83 ADDRP-----TVYDVVS   94 (139)
Q Consensus        83 p~~Rp-----s~~~v~~   94 (139)
                      |.+||     ++.+++.
T Consensus       244 P~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          244 PKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             TTTSTTCSTTTHHHHHT
T ss_pred             HHHhcCCCCCCHHHHHc
Confidence            99999     8888875

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=98.99  E-value=5.1e-10  Score=83.96  Aligned_cols=81  Identities=16%  Similarity=0.064  Sum_probs=53.3

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|+++|||++|+.||....  .......+   .. ....    ............+.+++..||+.+|
T Consensus       224 ~~~~~~~~DiwSlG~il~elltg~~Pf~~~~--~~~~~~~i---~~-~~~~----~~~~~~~~~s~~~~~li~~~L~~dP  293 (387)
T 1kob_A          224 REPVGFYTDMWAIGVLGYVLLSGLSPFAGED--DLETLQNV---KR-CDWE----FDEDAFSSVSPEAKDFIKNLLQKEP  293 (387)
T ss_dssp             TCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS--HHHHHHHH---HH-CCCC----CCSSTTTTSCHHHHHHHHTTSCSSG
T ss_pred             CCCCCCcccEeeHhHHHHHHHhCCCCCCCCC--HHHHHHHH---Hh-CCCC----CCccccccCCHHHHHHHHHHcCCCh
Confidence            4567889999999999999999999985321  11111111   11 1110    0000011123378899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       294 ~~Rpt~~ell~  304 (387)
T 1kob_A          294 RKRLTVHDALE  304 (387)
T ss_dssp             GGSCCHHHHHT
T ss_pred             hHCcCHHHHhh
Confidence            99999999986

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=98.99  E-value=6e-10  Score=85.34  Aligned_cols=80  Identities=15%  Similarity=0.133  Sum_probs=53.2

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +.++.++||||+|+++|+|++|+.||.....  .....   .........   ....  .......+.+++..|++.+|.
T Consensus       202 ~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~---~i~~~~~~~---~~~~--~~~~s~~~~~li~~~L~~dp~  271 (484)
T 3nyv_A          202 GTYDEKCDVWSTGVILYILLSGCPPFNGANE--YDILK---KVEKGKYTF---ELPQ--WKKVSESAKDLIRKMLTYVPS  271 (484)
T ss_dssp             TCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHH---HHHHCCCCC---CSGG--GGGSCHHHHHHHHHHTCSSGG
T ss_pred             CCCCCcceeHHHHHHHHHHHHCCCCCCCCCH--HHHHH---HHHcCCCCC---CCcc--cccCCHHHHHHHHHHCCCChh
Confidence            3578899999999999999999999863221  11111   111111111   1100  111223788999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       272 ~R~s~~e~l~  281 (484)
T 3nyv_A          272 MRISARDALD  281 (484)
T ss_dssp             GSCCHHHHHT
T ss_pred             HCcCHHHHhh
Confidence            9999999985

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=98.99  E-value=1.1e-09  Score=83.20  Aligned_cols=77  Identities=13%  Similarity=0.137  Sum_probs=54.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ++.++.++||||+|++++||++|+.||.....  ..   ............         |......+.+++..||+.||
T Consensus       323 ~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~---~~~~i~~~~~~~---------p~~~~~~~~~li~~~L~~dP  388 (446)
T 4ejn_A          323 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EK---LFELILMEEIRF---------PRTLGPEAKSLLSGLLKKDP  388 (446)
T ss_dssp             TSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HH---HHHHHHHCCCCC---------CTTSCHHHHHHHHHHTCSST
T ss_pred             CCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--HH---HHHHHHhCCCCC---------CccCCHHHHHHHHHHcccCH
Confidence            45688999999999999999999999853221  11   111111111111         33333478899999999999


Q ss_pred             CCCC-----CHHHHHH
Q 047465           84 DDRP-----TVYDVVS   94 (139)
Q Consensus        84 ~~Rp-----s~~~v~~   94 (139)
                      .+||     ++.++++
T Consensus       389 ~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          389 KQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             TTSTTCSTTTHHHHHT
T ss_pred             HHhCCCCCCCHHHHHh
Confidence            9999     9999875

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=98.97  E-value=1.4e-09  Score=78.55  Aligned_cols=85  Identities=13%  Similarity=0.069  Sum_probs=52.3

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCc---------hHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHH
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDS---------LIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTL   76 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~   76 (139)
                      .++.++||||+|++++||++|+.||.......         ..........+..+... ++...   .......+.+++.
T Consensus       202 ~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~---~~~~~~~~~~li~  277 (316)
T 2ac3_A          202 IYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYE-FPDKD---WAHISCAAKDLIS  277 (316)
T ss_dssp             HHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCC-CCHHH---HTTSCHHHHHHHH
T ss_pred             CCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcc-cCchh---cccCCHHHHHHHH
Confidence            36789999999999999999999986432210         00001111111111110 00000   0112237889999


Q ss_pred             HhcccCCCCCCCHHHHHH
Q 047465           77 LCAQESADDRPTVYDVVS   94 (139)
Q Consensus        77 ~C~~~~p~~Rps~~~v~~   94 (139)
                      +|++.||.+||++.++++
T Consensus       278 ~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          278 KLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             HHSCSSTTTSCCHHHHHH
T ss_pred             HHhhCChhhCCCHHHHhc
Confidence            999999999999999986

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=98.97  E-value=7.4e-10  Score=80.46  Aligned_cols=89  Identities=10%  Similarity=0.061  Sum_probs=52.8

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccch------------------------hhhhhhh
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIF------------------------LCLWLII   60 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~   60 (139)
                      ..++.++||||+|++++||++|+.|+.........+.... ........                        ..+....
T Consensus       206 ~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (330)
T 3nsz_A          206 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA-KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV  284 (330)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHH-HHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGC
T ss_pred             CcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHH-HhcCCchhhhHHHHhccccccchhhhhhhccccchhhhc
Confidence            4678899999999999999999999843222111111110 10000000                        0000000


Q ss_pred             c-cCCCCCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           61 N-LRHGIYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        61 d-~~p~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      . ..+......+.+++..|++.||.+||++.++++
T Consensus       285 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          285 HSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             CTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             cccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            0 001112337899999999999999999999976

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=98.97  E-value=2.8e-09  Score=76.25  Aligned_cols=88  Identities=11%  Similarity=0.026  Sum_probs=52.8

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhc---cCC--------------CCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIIN---LRH--------------GIY   67 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---~~p--------------~~~   67 (139)
                      ..++.++||||+|++++||++|+.||.....  ......+...........++.+..   ..+              ...
T Consensus       176 ~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (288)
T 1ob3_A          176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE--ADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGL  253 (288)
T ss_dssp             CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSC
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhc
Confidence            3578999999999999999999999864321  111111111111110000000000   000              111


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           68 GRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        68 ~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ...+.+++.+|++.||.+||++.+++.
T Consensus       254 ~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          254 DESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            237789999999999999999999875

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=98.97  E-value=9.2e-10  Score=81.01  Aligned_cols=29  Identities=21%  Similarity=0.383  Sum_probs=25.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEF   32 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~   32 (139)
                      +..++.++||||+|++++||++|+.||..
T Consensus       233 ~~~~~~~~DiwslG~il~ell~g~~pf~~  261 (360)
T 3llt_A          233 NLGWDVSSDMWSFGCVLAELYTGSLLFRT  261 (360)
T ss_dssp             TCCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence            45688999999999999999999999854

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=98.97  E-value=8.3e-10  Score=83.40  Aligned_cols=81  Identities=15%  Similarity=0.044  Sum_probs=53.5

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++||||+|+++++|++|+.||...... ..+...    +..+.....+...   +. ....+.+++..|++.+|.
T Consensus       319 ~~~~~~~DiwslG~il~~lltg~~pf~~~~~~-~~~~~~----i~~~~~~~~~~~~---~~-~~~~~~~li~~~L~~dP~  389 (419)
T 3i6u_A          319 AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ-VSLKDQ----ITSGKYNFIPEVW---AE-VSEKALDLVKKLLVVDPK  389 (419)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS-CCHHHH----HHTTCCCCCHHHH---TT-SCHHHHHHHHHHSCSSTT
T ss_pred             CCCCchhhhHhHHHHHHHHHHCCCCCCCCcch-HHHHHH----HhcCCCCCCchhh---cc-cCHHHHHHHHHHccCChh
Confidence            45778999999999999999999998643321 111111    1112111000111   11 122788999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.++++
T Consensus       390 ~Rps~~e~l~  399 (419)
T 3i6u_A          390 ARFTTEEALR  399 (419)
T ss_dssp             TSCCHHHHHH
T ss_pred             HCcCHHHHhC
Confidence            9999999876

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=98.97  E-value=1e-09  Score=81.60  Aligned_cols=81  Identities=11%  Similarity=0.051  Sum_probs=52.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|+++++|++|..||....  ......   . +..+....-....    ......+.+++..|+..+|
T Consensus       192 ~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~--~~~~~~---~-i~~~~~~~~~~~~----~~~s~~~~~li~~~L~~dP  261 (361)
T 2yab_A          192 YEPLGLEADMWSIGVITYILLSGASPFLGDT--KQETLA---N-ITAVSYDFDEEFF----SQTSELAKDFIRKLLVKET  261 (361)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS--HHHHHH---H-HHTTCCCCCHHHH----TTSCHHHHHHHHHHSCSST
T ss_pred             CCCCCccccHHHHHHHHHHHHhCCCCCCCCC--HHHHHH---H-HHhcCCCCCchhc----cCCCHHHHHHHHHHCCCCh
Confidence            4567889999999999999999999985321  111111   1 1111110000110    1112278889999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       262 ~~R~t~~e~l~  272 (361)
T 2yab_A          262 RKRLTIQEALR  272 (361)
T ss_dssp             TTSCCHHHHHT
T ss_pred             hHCcCHHHHhc
Confidence            99999999874

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=98.96  E-value=2e-09  Score=82.84  Aligned_cols=79  Identities=16%  Similarity=0.179  Sum_probs=54.6

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDR   86 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~R   86 (139)
                      .+.++||||+|++++||++|+.||.....  ...   ... +..+...    .    |......+.+++..||+.||.+|
T Consensus       193 ~~~~~DiwSlGvil~elltG~~Pf~~~~~--~~~---~~~-i~~~~~~----~----p~~~s~~~~~Li~~~L~~dP~~R  258 (476)
T 2y94_A          193 AGPEVDIWSSGVILYALLCGTLPFDDDHV--PTL---FKK-ICDGIFY----T----PQYLNPSVISLLKHMLQVDPMKR  258 (476)
T ss_dssp             CSHHHHHHHHHHHHHHHHHSSCSSCCSSS--HHH---HHH-HHTTCCC----C----CTTCCHHHHHHHHHHTCSSTTTS
T ss_pred             CCCcceehhhHHHHHHHhhCCCCCCCCCH--HHH---HHH-HhcCCcC----C----CccCCHHHHHHHHHHcCCCchhC
Confidence            36799999999999999999999863221  111   111 1112111    0    33333478899999999999999


Q ss_pred             CCHHHHHH--HHhcc
Q 047465           87 PTVYDVVS--MLTNE   99 (139)
Q Consensus        87 ps~~~v~~--~L~~~   99 (139)
                      |++.+++.  ++...
T Consensus       259 pt~~eil~hp~~~~~  273 (476)
T 2y94_A          259 ATIKDIREHEWFKQD  273 (476)
T ss_dssp             CCHHHHHTCHHHHTT
T ss_pred             cCHHHHHhCHHhhhc
Confidence            99999986  45543

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=98.96  E-value=1.4e-09  Score=80.53  Aligned_cols=78  Identities=14%  Similarity=0.043  Sum_probs=49.7

Q ss_pred             ccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCCCC
Q 047465            9 IKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRPT   88 (139)
Q Consensus         9 ~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~Rps   88 (139)
                      .++||||+|+++|+|++|+.||...... ...............     .+.+  .......+.+++.+||+.+|.+||+
T Consensus       197 ~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~~~~~~~~~~~-----~~~~--~~~~s~~~~~li~~~L~~dP~~Rps  268 (361)
T 3uc3_A          197 KIADVWSCGVTLYVMLVGAYPFEDPEEP-RDYRKTIQRILSVKY-----SIPD--DIRISPECCHLISRIFVADPATRIS  268 (361)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSCC----C-CCHHHHHHHHHTTCC-----CCCT--TSCCCHHHHHHHHHHSCSCTTTSCC
T ss_pred             CeeeeehhHHHHHHHHhCCCCCCCCccH-HHHHHHHHHHhcCCC-----CCCC--cCCCCHHHHHHHHHHccCChhHCcC
Confidence            3489999999999999999998643221 111122222221111     1111  1122337889999999999999999


Q ss_pred             HHHHHH
Q 047465           89 VYDVVS   94 (139)
Q Consensus        89 ~~~v~~   94 (139)
                      +.+++.
T Consensus       269 ~~ell~  274 (361)
T 3uc3_A          269 IPEIKT  274 (361)
T ss_dssp             HHHHHT
T ss_pred             HHHHHh
Confidence            999986

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=98.96  E-value=4.5e-10  Score=80.83  Aligned_cols=91  Identities=13%  Similarity=0.092  Sum_probs=53.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|++++||++|+.||......     . ...........................+..++..||+.+|
T Consensus       172 ~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP  245 (299)
T 3m2w_A          172 GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-----A-ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEP  245 (299)
T ss_dssp             TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSST
T ss_pred             cccCCchhhHHHHHHHHHHHHHCCCCCCCCcch-----h-hhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccCh
Confidence            345788999999999999999999998532110     0 0000000000000000000001122378899999999999


Q ss_pred             CCCCCHHHHHH--HHhccc
Q 047465           84 DDRPTVYDVVS--MLTNEA  100 (139)
Q Consensus        84 ~~Rps~~~v~~--~L~~~~  100 (139)
                      .+||++.+++.  ++.+..
T Consensus       246 ~~Rps~~e~l~hp~~~~~~  264 (299)
T 3m2w_A          246 TQRMTITEFMNHPWIMQST  264 (299)
T ss_dssp             TTSCCHHHHHTSHHHHTGG
T ss_pred             hhCCCHHHHhcChhhcccc
Confidence            99999999986  444443

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=98.96  E-value=6.8e-10  Score=82.53  Aligned_cols=71  Identities=10%  Similarity=-0.025  Sum_probs=49.4

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      .++.++||||||+++|||++|+.||......              ....   .+.. ........+.+++..||+.+|.+
T Consensus       289 ~~~~~~DvwSlG~il~elltg~~Pf~~~~~~--------------~~~~---~~~~-~~~~~~~~~~~li~~~L~~dp~~  350 (377)
T 3byv_A          289 LMTFSFDAWALGLVIYWIWCADLPITKDAAL--------------GGSE---WIFR-SCKNIPQPVRALLEGFLRYPKED  350 (377)
T ss_dssp             ECCHHHHHHHHHHHHHHHHHSSCCC--------------------CCSG---GGGS-SCCCCCHHHHHHHHHHTCSSGGG
T ss_pred             cCChhhhHHHHHHHHHHHHHCCCCCcccccc--------------cchh---hhhh-hccCCCHHHHHHHHHHcCCCchh
Confidence            5789999999999999999999998532110              0000   1110 01122237889999999999999


Q ss_pred             CCCHHHHHH
Q 047465           86 RPTVYDVVS   94 (139)
Q Consensus        86 Rps~~~v~~   94 (139)
                      ||++.++++
T Consensus       351 Rpt~~e~l~  359 (377)
T 3byv_A          351 RLLPLQAME  359 (377)
T ss_dssp             CCCHHHHHT
T ss_pred             CCCHHHHhh
Confidence            999999985

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=98.96  E-value=3.7e-09  Score=76.95  Aligned_cols=95  Identities=11%  Similarity=0.063  Sum_probs=56.9

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhc-----------c-------CCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIIN-----------L-------RHGI   66 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------~-------~p~~   66 (139)
                      ..++.++||||+|+++++|++|+.||.....  ......+...........++....           .       ....
T Consensus       176 ~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (324)
T 3mtl_A          176 TDYSTQIDMWGVGCIFYEMATGRPLFPGSTV--EEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPR  253 (324)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTT
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCC
Confidence            4578999999999999999999999864321  111122212111110000000000           0       0011


Q ss_pred             CHHHHHHHHHHhcccCCCCCCCHHHHHH--HHhcccC
Q 047465           67 YGRTTGHWTLLCAQESADDRPTVYDVVS--MLTNEAT  101 (139)
Q Consensus        67 ~~~~~~~l~~~C~~~~p~~Rps~~~v~~--~L~~~~~  101 (139)
                      ....+.+++..|++.||.+||++.++++  ++.....
T Consensus       254 ~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  290 (324)
T 3mtl_A          254 LDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE  290 (324)
T ss_dssp             SCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCS
T ss_pred             CCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccc
Confidence            1227789999999999999999999986  4555443

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=98.96  E-value=1.6e-09  Score=80.27  Aligned_cols=30  Identities=20%  Similarity=0.269  Sum_probs=26.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFY   33 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~   33 (139)
                      +..++.++||||+|++++||++|+.||...
T Consensus       267 ~~~~~~~~DiwslG~il~elltg~~pf~~~  296 (397)
T 1wak_A          267 GSGYNTPADIWSTACMAFELATGDYLFEPH  296 (397)
T ss_dssp             TSCCCTHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred             CCCCCcHHHHHHHHHHHHHHhhCCCCCCCC
Confidence            445889999999999999999999998643

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=98.96  E-value=1.2e-09  Score=82.33  Aligned_cols=88  Identities=9%  Similarity=-0.052  Sum_probs=52.2

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccch-----------h-hhhhhhccCCC-------
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIF-----------L-CLWLIINLRHG-------   65 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~-~~~~~~d~~p~-------   65 (139)
                      ..++.++||||+||+++||++|+.||.....  ......+.........           . .+..+....+.       
T Consensus       238 ~~~~~~~DiWSlG~il~ell~G~~pF~g~~~--~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (398)
T 4b99_A          238 HEYTQAIDLWSVGCIFGEMLARRQLFPGKNY--VHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYP  315 (398)
T ss_dssp             SCCCTHHHHHHHHHHHHHHHHTSCSSCCSSH--HHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHST
T ss_pred             CCCCChhheehhHHHHHHHHHCCCCCCCCCH--HHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCC
Confidence            3568999999999999999999999864321  1111111111100000           0 00000000000       


Q ss_pred             CCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           66 IYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        66 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      .....+.+++.+|+..||.+||++.++++
T Consensus       316 ~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          316 GADRQALSLLGRMLRFEPSARISAAAALR  344 (398)
T ss_dssp             TCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            01226788999999999999999999875

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=98.95  E-value=1.7e-10  Score=83.06  Aligned_cols=90  Identities=11%  Similarity=0.007  Sum_probs=57.7

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++||||+|+++|||++|+.||.........  ............. . ....  +.+ ...+.+++.+||+.||.
T Consensus       177 ~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~--~~~~~~~~~~~~~-~-~~~~--~~~-~~~l~~li~~~l~~dP~  249 (286)
T 3uqc_A          177 PDANPQDDIRGIGASLYALLVNRWPLPEAGVRSGL--APAERDTAGQPIE-P-ADID--RDI-PFQISAVAARSVQGDGG  249 (286)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCS--EECCBCTTSCBCC-H-HHHC--TTS-CHHHHHHHHHHHCTTSS
T ss_pred             CCCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhh--HHHHHHhccCCCC-h-hhcc--cCC-CHHHHHHHHHHcccCCc
Confidence            35788999999999999999999998643221000  0000000000000 0 1111  222 23788999999999999


Q ss_pred             CCCCHHHHHHHHhcccCC
Q 047465           85 DRPTVYDVVSMLTNEATT  102 (139)
Q Consensus        85 ~Rps~~~v~~~L~~~~~~  102 (139)
                      +| ++.+++..|+.....
T Consensus       250 ~R-s~~el~~~L~~~~~~  266 (286)
T 3uqc_A          250 IR-SASTLLNLMQQATAV  266 (286)
T ss_dssp             CC-CHHHHHHHHHHHHC-
T ss_pred             cC-CHHHHHHHHHHHhcc
Confidence            99 999999999987653

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=98.95  E-value=2.3e-09  Score=77.24  Aligned_cols=86  Identities=12%  Similarity=0.052  Sum_probs=52.5

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhc-----------cchhhhhhhhccCC---------
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANS-----------HIFLCLWLIINLRH---------   64 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~d~~p---------   64 (139)
                      ..++.++||||+|++++++++|+.|+......  .....+......           .....-..+.+  +         
T Consensus       178 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  253 (311)
T 4agu_A          178 TQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV--DQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPD--PEDMEPLELK  253 (311)
T ss_dssp             SCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCC--CSSCCCHHHH
T ss_pred             CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhcccccccccccccccccccCcCCC--ccccchhhhh
Confidence            45789999999999999999999998643221  111111111100           00000000000  0         


Q ss_pred             -CCCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           65 -GIYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        65 -~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                       ......+.+++..||+.+|.+||++.+++.
T Consensus       254 ~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          254 FPNISYPALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             CTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             cccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence             011226889999999999999999999975

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=98.95  E-value=8.1e-10  Score=79.10  Aligned_cols=84  Identities=19%  Similarity=0.294  Sum_probs=51.8

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhc-cCCCCCHHHHHHHHHHhcccCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIIN-LRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      .++.++||||+|++++||++|+.|+....... . ..   ...............+ .........+.+++..||+.+|.
T Consensus       203 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~  277 (303)
T 2vwi_A          203 GYDFKADIWSFGITAIELATGAAPYHKYPPMK-V-LM---LTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPE  277 (303)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG-H-HH---HHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGG
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCccCchhh-H-HH---HHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChh
Confidence            46889999999999999999999986433211 1 11   1111111000000000 00111223788999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       278 ~Rps~~~ll~  287 (303)
T 2vwi_A          278 KRPTAAELLR  287 (303)
T ss_dssp             GSCCHHHHHT
T ss_pred             hCcCHHHHhh
Confidence            9999999875

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=98.95  E-value=2.9e-09  Score=77.15  Aligned_cols=87  Identities=14%  Similarity=0.076  Sum_probs=53.2

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhh-------------c------cCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII-------------N------LRHG   65 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------d------~~p~   65 (139)
                      ..++.++||||+|+++++|++|+.||...... .. ...+...........+..+.             +      ..+.
T Consensus       195 ~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (311)
T 3niz_A          195 KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD-DQ-LPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPG  272 (311)
T ss_dssp             CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTT-TH-HHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTT
T ss_pred             CCCCchHHhHHHHHHHHHHHhCCCCCCCCChH-HH-HHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcc
Confidence            45789999999999999999999998644332 11 11111111111000000000             0      0011


Q ss_pred             CCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           66 IYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        66 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                       ....+.+++..|++.||.+||++.+++.
T Consensus       273 -~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          273 -FCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             -CCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             -cCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence             1126788999999999999999999975

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=98.95  E-value=2.3e-09  Score=77.29  Aligned_cols=88  Identities=8%  Similarity=-0.028  Sum_probs=53.2

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhh-------hhc---------cCCCCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWL-------IIN---------LRHGIY   67 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d---------~~p~~~   67 (139)
                      ++.++.++||||+|++++||++|+.||.....  ......+...........++.       ...         ..+. .
T Consensus       193 ~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  269 (308)
T 3g33_A          193 QSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE--ADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPE-M  269 (308)
T ss_dssp             TSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSH--HHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCS-C
T ss_pred             CCCCCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCcc-c
Confidence            45678999999999999999999999854321  111111111111000000000       000         0011 1


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           68 GRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        68 ~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ...+.+++..|++.||.+||++.++++
T Consensus       270 ~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          270 EESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence            227789999999999999999999865

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=98.95  E-value=3.7e-10  Score=82.81  Aligned_cols=92  Identities=14%  Similarity=0.111  Sum_probs=52.5

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|++++++++|+.||.......  ..............    .............+.+++..||+.+|
T Consensus       203 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~L~~dP  276 (336)
T 3fhr_A          203 PEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQA--ISPGMKRRIRLGQY----GFPNPEWSEVSEDAKQLIRLLLKTDP  276 (336)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------------CCCTTTSTTCCHHHHHHHHHHSCSSG
T ss_pred             CCCCCchhhHHHHHHHHHHHHHCCCCCCCccchh--hhhhHHHhhhcccc----ccCchhhccCCHHHHHHHHHHCCCCh
Confidence            3446778999999999999999999985322210  00000011100110    00000011223378899999999999


Q ss_pred             CCCCCHHHHHH--HHhcccC
Q 047465           84 DDRPTVYDVVS--MLTNEAT  101 (139)
Q Consensus        84 ~~Rps~~~v~~--~L~~~~~  101 (139)
                      .+||++.+++.  ++.....
T Consensus       277 ~~Rpt~~ell~hp~~~~~~~  296 (336)
T 3fhr_A          277 TERLTITQFMNHPWINQSMV  296 (336)
T ss_dssp             GGSCCHHHHHHSHHHHTGGG
T ss_pred             hHCcCHHHHhcCcccccccc
Confidence            99999999997  5555433

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=98.95  E-value=1.7e-09  Score=83.22  Aligned_cols=80  Identities=11%  Similarity=0.052  Sum_probs=52.7

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +.++.++||||+|+++|+|++|+.||.....  ......    +..+....  ....  .......+.+++..||+.+|.
T Consensus       212 ~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~----i~~~~~~~--~~~~--~~~~s~~~~~li~~~L~~dp~  281 (494)
T 3lij_A          212 KKYDEKCDVWSIGVILFILLAGYPPFGGQTD--QEILRK----VEKGKYTF--DSPE--WKNVSEGAKDLIKQMLQFDSQ  281 (494)
T ss_dssp             TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHH----HHHTCCCC--CSGG--GTTSCHHHHHHHHHHTCSSTT
T ss_pred             ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHH----HHhCCCCC--Cchh--cccCCHHHHHHHHHHCCCChh
Confidence            4578899999999999999999999863221  111111    11111110  0000  011223788999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       282 ~R~s~~e~l~  291 (494)
T 3lij_A          282 RRISAQQALE  291 (494)
T ss_dssp             TSCCHHHHHT
T ss_pred             hCccHHHHhc
Confidence            9999999884

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=98.95  E-value=3.8e-10  Score=82.47  Aligned_cols=86  Identities=13%  Similarity=0.054  Sum_probs=51.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcC--chHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTD--SLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      +..++.++||||+|+++++|++|+.||......  ...... ....+..+....-.+.    .......+.+++..|++.
T Consensus       183 ~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~----~~~~s~~~~~li~~~L~~  257 (325)
T 3kn6_A          183 QNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVE-IMKKIKKGDFSFEGEA----WKNVSQEAKDLIQGLLTV  257 (325)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHH-HHHHHTTTCCCCCSHH----HHTSCHHHHHHHHHHHCC
T ss_pred             CCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHH-HHHHHHcCCCCCCccc----ccCCCHHHHHHHHHHCCC
Confidence            456788999999999999999999998643221  011111 1122222221100000    001122788999999999


Q ss_pred             CCCCCCCHHHHHH
Q 047465           82 SADDRPTVYDVVS   94 (139)
Q Consensus        82 ~p~~Rps~~~v~~   94 (139)
                      +|.+||++.+++.
T Consensus       258 dP~~Rpt~~ell~  270 (325)
T 3kn6_A          258 DPNKRLKMSGLRY  270 (325)
T ss_dssp             CTTTCCCTTTSTT
T ss_pred             ChhHCCCHHHHhc
Confidence            9999999998763

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=98.95  E-value=1.8e-09  Score=80.43  Aligned_cols=29  Identities=21%  Similarity=0.390  Sum_probs=25.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEF   32 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~   32 (139)
                      +..++.++||||+|++++||++|+.||..
T Consensus       232 ~~~~~~~~DiwSlG~il~elltg~~pf~~  260 (382)
T 2vx3_A          232 GMPYDLAIDMWSLGCILVEMHTGEPLFSG  260 (382)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            45688999999999999999999999864

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=98.94  E-value=1.6e-09  Score=79.72  Aligned_cols=29  Identities=28%  Similarity=0.503  Sum_probs=25.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEF   32 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~   32 (139)
                      +..++.++||||+|+++++|++|+.||..
T Consensus       204 ~~~~~~~~Di~slG~il~~l~~g~~pf~~  232 (360)
T 3eqc_A          204 GTHYSVQSDIWSMGLSLVEMAVGRYPIPP  232 (360)
T ss_dssp             TCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            45678999999999999999999999864

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=98.94  E-value=2.1e-09  Score=77.92  Aligned_cols=88  Identities=11%  Similarity=0.003  Sum_probs=53.0

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccch------------------------------
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIF------------------------------   53 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------   53 (139)
                      +..++.++||||+|++++|+++|+.||.....  ......+......-..                              
T Consensus       208 ~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (339)
T 1z57_A          208 ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS--KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVS  285 (339)
T ss_dssp             TSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH--HHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHH
T ss_pred             CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhh
Confidence            45678999999999999999999999864322  1111111111100000                              


Q ss_pred             ---hhhhhhhccCCCCCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           54 ---LCLWLIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        54 ---~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                         ..+..... .+......+.+++..||+.||.+||++.+++.
T Consensus       286 ~~~~~~~~~~~-~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  328 (339)
T 1z57_A          286 RACKPLKEFML-SQDVEHERLFDLIQKMLEYDPAKRITLREALK  328 (339)
T ss_dssp             HHCCCGGGGCS-CCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             hcCcchhhhcc-cchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence               00000000 01111236789999999999999999999874

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=98.94  E-value=1.4e-09  Score=83.78  Aligned_cols=85  Identities=13%  Similarity=0.072  Sum_probs=55.1

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +.++.++||||+|+++|++++|+.||.....  ......    +..+....  ....  .......+.+++..|++.+|.
T Consensus       222 ~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~----i~~~~~~~--~~~~--~~~~s~~~~~li~~~L~~dp~  291 (504)
T 3q5i_A          222 KKYNEKCDVWSCGVIMYILLCGYPPFGGQND--QDIIKK----VEKGKYYF--DFND--WKNISDEAKELIKLMLTYDYN  291 (504)
T ss_dssp             TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHH----HHHCCCCC--CHHH--HTTSCHHHHHHHHHHTCSSTT
T ss_pred             cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHH----HHcCCCCC--Cccc--cCCCCHHHHHHHHHHcCCChh
Confidence            4578899999999999999999999863221  111111    11111100  0000  111223788999999999999


Q ss_pred             CCCCHHHHHH--HHhcc
Q 047465           85 DRPTVYDVVS--MLTNE   99 (139)
Q Consensus        85 ~Rps~~~v~~--~L~~~   99 (139)
                      +||++.+++.  ++.+.
T Consensus       292 ~R~t~~e~l~h~~~~~~  308 (504)
T 3q5i_A          292 KRCTAEEALNSRWIKKY  308 (504)
T ss_dssp             TSCCHHHHHTSHHHHHT
T ss_pred             HCCCHHHHhcCHhhhhc
Confidence            9999999985  45443

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=98.93  E-value=9e-10  Score=83.48  Aligned_cols=29  Identities=24%  Similarity=0.427  Sum_probs=25.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEF   32 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~   32 (139)
                      +..++.++|||||||+++||++|+.||..
T Consensus       273 ~~~~~~~~DiwSlG~il~elltG~~pf~~  301 (429)
T 3kvw_A          273 GARYGMPIDMWSLGCILAELLTGYPLLPG  301 (429)
T ss_dssp             TBCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCCCchHHHHhHHHHHHHHHhCCCCCCC
Confidence            45688999999999999999999998864

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=98.93  E-value=2.1e-09  Score=78.55  Aligned_cols=77  Identities=14%  Similarity=0.085  Sum_probs=52.3

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|+++|||++|+.||.....  .   ...........     .+    |......+.+++..||+.+|
T Consensus       195 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~---~~~~~i~~~~~-----~~----p~~~~~~~~~li~~~L~~dp  260 (327)
T 3a62_A          195 RSGHNRAVDWWSLGALMYDMLTGAPPFTGENR--K---KTIDKILKCKL-----NL----PPYLTQEARDLLKKLLKRNA  260 (327)
T ss_dssp             TSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--H---HHHHHHHHTCC-----CC----CTTSCHHHHHHHHHHSCSCG
T ss_pred             CCCCCCcccchhHHHHHHHHHHCCCCCCCCCH--H---HHHHHHHhCCC-----CC----CCCCCHHHHHHHHHHHhcCH
Confidence            45678899999999999999999999853211  1   11111111111     11    22223378899999999999


Q ss_pred             CCCC-----CHHHHHH
Q 047465           84 DDRP-----TVYDVVS   94 (139)
Q Consensus        84 ~~Rp-----s~~~v~~   94 (139)
                      .+||     ++.+++.
T Consensus       261 ~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          261 ASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             GGSTTSSTTTHHHHHH
T ss_pred             hhccCCCCCCHHHHHc
Confidence            9999     6777765

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=98.93  E-value=1.7e-09  Score=79.86  Aligned_cols=80  Identities=16%  Similarity=0.057  Sum_probs=51.6

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      .++.++||||||+++|||++|+.||...... ...............     ..    +......+.+++.+||+.+|.+
T Consensus       238 ~~~~~~DvwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~-----~~----~~~~~~~~~~li~~~L~~dP~~  307 (355)
T 1vzo_A          238 GHDKAVDWWSLGVLMYELLTGASPFTVDGEK-NSQAEISRRILKSEP-----PY----PQEMSALAKDLIQRLLMKDPKK  307 (355)
T ss_dssp             --CTHHHHHHHHHHHHHHHHSSCTTSCTTSC-CCHHHHHHHHHHCCC-----CC----CTTSCHHHHHHHHHHTCSSGGG
T ss_pred             CCCchhhHHHHHHHHHHHHHCCCCCccCCcc-chHHHHHHHHhccCC-----CC----CcccCHHHHHHHHHHhhhCHHH
Confidence            3678999999999999999999998543221 111111111111111     11    2222337888999999999999


Q ss_pred             CC-----CHHHHHHH
Q 047465           86 RP-----TVYDVVSM   95 (139)
Q Consensus        86 Rp-----s~~~v~~~   95 (139)
                      ||     ++.+++..
T Consensus       308 R~~~~~~s~~ell~h  322 (355)
T 1vzo_A          308 RLGCGPRDADEIKEH  322 (355)
T ss_dssp             STTSSTTTHHHHHTS
T ss_pred             hcCCCCCCHHHHHcC
Confidence            99     88888764

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=98.93  E-value=1.1e-09  Score=82.04  Aligned_cols=95  Identities=5%  Similarity=-0.074  Sum_probs=57.1

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhh-------------hhccCCCCC---HH
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWL-------------IINLRHGIY---GR   69 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~d~~p~~~---~~   69 (139)
                      .++.++||||||+++|||++|+.||...... ..................+..             .......+.   ..
T Consensus       199 ~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  277 (396)
T 4eut_A          199 KYGATVDLWSIGVTFYHAATGSLPFRPFEGP-RRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQV  277 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSSCSEECTTCT-TTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcc-cchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHh
Confidence            4567899999999999999999998543321 111111212121110000000             000000111   11


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHhcccC
Q 047465           70 TTGHWTLLCAQESADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        70 ~~~~l~~~C~~~~p~~Rps~~~v~~~L~~~~~  101 (139)
                      .+..++..|++.||.+||++.+++..+..+..
T Consensus       278 ~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~  309 (396)
T 4eut_A          278 LLTPVLANILEADQEKCWGFDQFFAETSDILH  309 (396)
T ss_dssp             HHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred             hchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence            67789999999999999999999998877644

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=98.92  E-value=2e-09  Score=78.58  Aligned_cols=29  Identities=21%  Similarity=0.337  Sum_probs=25.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEF   32 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~   32 (139)
                      +..++.++||||+|++++||++|+.||..
T Consensus       213 ~~~~~~~~Di~slG~il~el~~g~~pf~~  241 (355)
T 2eu9_A          213 ELGWAQPCDVWSIGCILFEYYRGFTLFQT  241 (355)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cCCCCCccchHHHHHHHHHHHhCCCCCCC
Confidence            45678999999999999999999999864

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=98.91  E-value=1.6e-09  Score=80.64  Aligned_cols=29  Identities=28%  Similarity=0.402  Sum_probs=25.7

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFY   33 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~   33 (139)
                      ..++.++||||+|++++||++|+.||...
T Consensus       212 ~~~~~~~DiwslG~il~el~~g~~pf~~~  240 (389)
T 3gni_B          212 QGYDAKSDIYSVGITACELANGHVPFKDM  240 (389)
T ss_dssp             SCBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             CCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence            46889999999999999999999998643

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=98.91  E-value=2.9e-09  Score=77.75  Aligned_cols=77  Identities=17%  Similarity=0.195  Sum_probs=53.2

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++|+||+|++++||++|+.||.....     ..............         |......+..++..|++.+|
T Consensus       177 ~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~i~~~~~~~---------p~~~~~~~~~li~~lL~~dp  242 (318)
T 1fot_A          177 TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-----MKTYEKILNAELRF---------PPFFNEDVKDLLSRLITRDL  242 (318)
T ss_dssp             TCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHHHCCCCC---------CTTSCHHHHHHHHHHTCSCT
T ss_pred             CCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhCCCCC---------CCCCCHHHHHHHHHHhccCH
Confidence            45678899999999999999999999853211     11111222211111         33333478899999999999


Q ss_pred             CCCC-----CHHHHHH
Q 047465           84 DDRP-----TVYDVVS   94 (139)
Q Consensus        84 ~~Rp-----s~~~v~~   94 (139)
                      .+||     ++.+++.
T Consensus       243 ~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          243 SQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             TTCTTSSTTTTHHHHT
T ss_pred             HHcCCCcCCCHHHHhc
Confidence            9999     8888874

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=98.91  E-value=2.6e-09  Score=78.97  Aligned_cols=77  Identities=17%  Similarity=0.133  Sum_probs=53.0

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++|+||+|++++||++|+.||.....  .   ....... .+..    .+    |......+..++..|++.+|
T Consensus       212 ~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~---~~~~~i~-~~~~----~~----p~~~~~~~~~li~~lL~~dp  277 (350)
T 1rdq_E          212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--I---QIYEKIV-SGKV----RF----PSHFSSDLKDLLRNLLQVDL  277 (350)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--H---HHHHHHH-HCCC----CC----CTTCCHHHHHHHHHHSCSCT
T ss_pred             CCCCCCcCCEecccHhHhHHhhCCCCCCCCCH--H---HHHHHHH-cCCC----CC----CCCCCHHHHHHHHHHhhcCH
Confidence            45678999999999999999999999853211  1   1111111 1111    11    22233478899999999999


Q ss_pred             CCCCC-----HHHHHH
Q 047465           84 DDRPT-----VYDVVS   94 (139)
Q Consensus        84 ~~Rps-----~~~v~~   94 (139)
                      .+||+     +.+++.
T Consensus       278 ~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          278 TKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             TTCTTSSTTTTHHHHT
T ss_pred             HhccCCccCCHHHHHh
Confidence            99998     787764

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=98.91  E-value=1.1e-09  Score=80.30  Aligned_cols=68  Identities=13%  Similarity=0.066  Sum_probs=50.8

Q ss_pred             CccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCCC
Q 047465            8 SIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRP   87 (139)
Q Consensus         8 s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~Rp   87 (139)
                      +.++||||+|+++++|++|+.||.....           ....       ....  |......+..++..||+.+|.+||
T Consensus       208 ~~~~DiwslG~il~el~~g~~pf~~~~~-----------~~~~-------~~~~--~~~~~~~l~~li~~~L~~dP~~Rp  267 (335)
T 3dls_A          208 GPELEMWSLGVTLYTLVFEENPFCELEE-----------TVEA-------AIHP--PYLVSKELMSLVSGLLQPVPERRT  267 (335)
T ss_dssp             SHHHHHHHHHHHHHHHHHSSCSCSSGGG-----------GTTT-------CCCC--SSCCCHHHHHHHHHHTCSSGGGSC
T ss_pred             CCcccchhHHHHHHHHHhCCCchhhHHH-----------HHhh-------ccCC--CcccCHHHHHHHHHHccCChhhCc
Confidence            7889999999999999999999853111           0100       1111  333444889999999999999999


Q ss_pred             CHHHHHHH
Q 047465           88 TVYDVVSM   95 (139)
Q Consensus        88 s~~~v~~~   95 (139)
                      ++.+++..
T Consensus       268 s~~ell~h  275 (335)
T 3dls_A          268 TLEKLVTD  275 (335)
T ss_dssp             CHHHHHHC
T ss_pred             CHHHHhcC
Confidence            99999874

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=98.91  E-value=3.5e-09  Score=78.85  Aligned_cols=26  Identities=31%  Similarity=0.446  Sum_probs=24.1

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTE   31 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~   31 (139)
                      .++.++||||+||+++||++|+.||.
T Consensus       223 ~y~~~~DiWSlG~il~ell~G~~Pf~  248 (361)
T 4f9c_A          223 NQTTAIDMWSAGVIFLSLLSGRYPFY  248 (361)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred             CCCCccchhhhHHHHHHHHHCCCCCC
Confidence            57899999999999999999999984

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=98.91  E-value=1.2e-09  Score=82.78  Aligned_cols=81  Identities=19%  Similarity=0.114  Sum_probs=51.3

Q ss_pred             CCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +.++.++||||+|++++||++ |+.|+.....   ..........   ...   ......+......+.+++..||+.+|
T Consensus       214 ~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~---~~~~i~~~~~---~~~---~~~~~~~~~~~~~~~~li~~~L~~dP  284 (434)
T 2rio_A          214 RRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS---RESNIIRGIF---SLD---EMKCLHDRSLIAEATDLISQMIDHDP  284 (434)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT---HHHHHHHTCC---CCC---CCTTCCCHHHHHHHHHHHHHHTCSSG
T ss_pred             cCcchhhhhHhHHHHHHHHHhCCCCCCCCchh---hHHHHhcCCC---Ccc---cccccccccchHHHHHHHHHHhhCCh
Confidence            568899999999999999998 8888753221   1111111000   000   00000000112378899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       285 ~~Rps~~eil~  295 (434)
T 2rio_A          285 LKRPTAMKVLR  295 (434)
T ss_dssp             GGSCCHHHHHT
T ss_pred             hhCCCHHHHHh
Confidence            99999999975

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=98.91  E-value=1.1e-09  Score=83.21  Aligned_cols=78  Identities=13%  Similarity=0.050  Sum_probs=49.8

Q ss_pred             CCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCC-CCHHHHHHHHHHhcccC
Q 047465            5 GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHG-IYGRTTGHWTLLCAQES   82 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~-~~~~~~~~l~~~C~~~~   82 (139)
                      ..++.++||||+||+++||++ |..|+.....   .   ...........    ....  +. .....+.+++..||+.+
T Consensus       204 ~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~---~---~~~~~~~~~~~----~~~~--~~~~~~~~~~~li~~~L~~d  271 (432)
T 3p23_A          204 ENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ---R---QANILLGACSL----DCLH--PEKHEDVIARELIEKMIAMD  271 (432)
T ss_dssp             -CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT---H---HHHHHTTCCCC----TTSC--TTCHHHHHHHHHHHHHSCSS
T ss_pred             cCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH---H---HHHHHhccCCc----cccC--ccccccHHHHHHHHHHHhCC
Confidence            456779999999999999999 7877743211   1   11111111111    1111  11 11225778999999999


Q ss_pred             CCCCCCHHHHHH
Q 047465           83 ADDRPTVYDVVS   94 (139)
Q Consensus        83 p~~Rps~~~v~~   94 (139)
                      |.+||++.++++
T Consensus       272 P~~Rps~~evl~  283 (432)
T 3p23_A          272 PQKRPSAKHVLK  283 (432)
T ss_dssp             GGGSCCHHHHHT
T ss_pred             HhhCCCHHHHHh
Confidence            999999999984

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=98.91  E-value=1.4e-09  Score=79.13  Aligned_cols=67  Identities=19%  Similarity=0.392  Sum_probs=48.7

Q ss_pred             CccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCCC
Q 047465            8 SIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRP   87 (139)
Q Consensus         8 s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~Rp   87 (139)
                      +.++||||||+++|||++|+.|+...     .      .........         +......+..++..||+.+|.+||
T Consensus       227 ~~~~Di~slG~il~el~~g~~pf~~~-----~------~~~~~~~~~---------~~~~~~~~~~li~~~l~~dp~~Rp  286 (320)
T 3a99_A          227 GRSAAVWSLGILLYDMVCGDIPFEHD-----E------EIIRGQVFF---------RQRVSSECQHLIRWCLALRPSDRP  286 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCSCCSH-----H------HHHHCCCCC---------SSCCCHHHHHHHHHHTCSSGGGSC
T ss_pred             CccchHHhHHHHHHHHHHCCCCCCCh-----h------hhhcccccc---------cccCCHHHHHHHHHHccCChhhCc
Confidence            67889999999999999999998521     1      011111110         222233788999999999999999


Q ss_pred             CHHHHHH
Q 047465           88 TVYDVVS   94 (139)
Q Consensus        88 s~~~v~~   94 (139)
                      ++.+++.
T Consensus       287 s~~~ll~  293 (320)
T 3a99_A          287 TFEEIQN  293 (320)
T ss_dssp             CHHHHHT
T ss_pred             CHHHHhc
Confidence            9999975

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=98.91  E-value=3.6e-10  Score=85.26  Aligned_cols=70  Identities=10%  Similarity=-0.041  Sum_probs=48.4

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      .++.++||||||+++|||++|+.||.......              ...   .+... ....+..+.+++..||+.+|.+
T Consensus       293 ~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~--------------~~~---~~~~~-~~~~~~~~~~li~~~l~~dP~~  354 (413)
T 3dzo_A          293 LMTFAFDTWTLGLAIYWIWCADLPNTDDAALG--------------GSE---WIFRS-CKNIPQPVRALLEGFLRYPKED  354 (413)
T ss_dssp             EECHHHHHHHHHHHHHHHHHSSCCCCTTGGGS--------------CSG---GGGSS-CCCCCHHHHHHHHHHTCSSGGG
T ss_pred             CCCchhhHHHHHHHHHHHHHCCCCCCCcchhh--------------hHH---HHHhh-cccCCHHHHHHHHHHccCChhh
Confidence            47789999999999999999999985321110              000   11100 1112237899999999999999


Q ss_pred             CCCHHHHH
Q 047465           86 RPTVYDVV   93 (139)
Q Consensus        86 Rps~~~v~   93 (139)
                      ||++.+++
T Consensus       355 Rpt~~~~l  362 (413)
T 3dzo_A          355 RLLPLQAM  362 (413)
T ss_dssp             SCCHHHHT
T ss_pred             CcCHHHHH
Confidence            99966654

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=98.90  E-value=1.5e-09  Score=79.16  Aligned_cols=87  Identities=9%  Similarity=-0.066  Sum_probs=51.9

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhh------ccC------------CCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII------NLR------------HGIY   67 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~------------p~~~   67 (139)
                      .++.++||||+|++++||++|+.||.....  ......+...........+....      +.-            +...
T Consensus       214 ~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (329)
T 3gbz_A          214 HYSTSVDIWSIACIWAEMLMKTPLFPGDSE--IDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALL  291 (329)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGS
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCcCCCCH--HHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhccccc
Confidence            478999999999999999999999864321  11111111111000000000000      000            0012


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           68 GRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        68 ~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ...+.+++..|++.||.+||++.++++
T Consensus       292 ~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          292 DDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHhC
Confidence            237789999999999999999999875

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=98.90  E-value=2.8e-09  Score=78.53  Aligned_cols=29  Identities=24%  Similarity=0.370  Sum_probs=24.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEF   32 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~   32 (139)
                      +..++.++||||+|++++||++|+.||..
T Consensus       209 ~~~~~~~~Di~slG~il~el~~g~~pf~~  237 (373)
T 1q8y_A          209 GAPWGCGADIWSTACLIFELITGDFLFEP  237 (373)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCCC--
T ss_pred             CCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence            44678999999999999999999999864

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=98.90  E-value=1.5e-09  Score=78.11  Aligned_cols=88  Identities=17%  Similarity=0.047  Sum_probs=52.4

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhc---cchhhh--------h-hhhcc------CCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANS---HIFLCL--------W-LIINL------RHGI   66 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--------~-~~~d~------~p~~   66 (139)
                      ..++.++||||+|++++|+++|+.||.....  ......+......   .....+        . .....      .+..
T Consensus       200 ~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (320)
T 2i6l_A          200 NNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE--LEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPG  277 (320)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTT
T ss_pred             ccCCchhhhHhHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcch
Confidence            5678899999999999999999999864321  1111111110000   000000        0 00000      0011


Q ss_pred             CHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           67 YGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        67 ~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ....+.+++..|++.+|.+||++.+++.
T Consensus       278 ~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          278 ISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             CCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             hhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence            2237889999999999999999999975

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=98.90  E-value=3.2e-09  Score=76.86  Aligned_cols=89  Identities=13%  Similarity=0.017  Sum_probs=53.3

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhh---------------ccCCCCCH
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII---------------NLRHGIYG   68 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------d~~p~~~~   68 (139)
                      ++.++.++||||+|++++++++|+.||.....  ......+...........++...               ..-.....
T Consensus       193 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (326)
T 1blx_A          193 QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD--VDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDID  270 (326)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCC
T ss_pred             cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCC
Confidence            45678999999999999999999999864321  11111111111100000000000               00001122


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           69 RTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        69 ~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ..+.+++.+||+.+|.+||++.+++.
T Consensus       271 ~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          271 ELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            37789999999999999999999984

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=98.90  E-value=9e-10  Score=78.08  Aligned_cols=73  Identities=12%  Similarity=0.103  Sum_probs=50.3

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      .++.++||||+|+++++++++..++..    ... .    ..+..+...   .+    +......+.+++..||+.+|.+
T Consensus       207 ~~~~~~Di~slG~il~~l~~~~~~~~~----~~~-~----~~~~~~~~~---~~----~~~~~~~~~~li~~~l~~dp~~  270 (289)
T 1x8b_A          207 THLPKADIFALALTVVCAAGAEPLPRN----GDQ-W----HEIRQGRLP---RI----PQVLSQEFTELLKVMIHPDPER  270 (289)
T ss_dssp             TTHHHHHHHHHHHHHHHHTTCCCCCSS----SHH-H----HHHHTTCCC---CC----SSCCCHHHHHHHHHHTCSSGGG
T ss_pred             CCCchhhHHHHHHHHHHHhcCCCCCcc----hhH-H----HHHHcCCCC---CC----CcccCHHHHHHHHHHhCCCccc
Confidence            456799999999999999998866531    111 1    112222222   11    2223348899999999999999


Q ss_pred             CCCHHHHHH
Q 047465           86 RPTVYDVVS   94 (139)
Q Consensus        86 Rps~~~v~~   94 (139)
                      ||++.++++
T Consensus       271 Rps~~~ll~  279 (289)
T 1x8b_A          271 RPSAMALVK  279 (289)
T ss_dssp             SCCHHHHHT
T ss_pred             CCCHHHHhh
Confidence            999999864

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=98.90  E-value=3.1e-09  Score=76.85  Aligned_cols=76  Identities=22%  Similarity=0.241  Sum_probs=49.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+|++++||++|..++.       ...... ........+   ....   . ....+.+++..||+.+|
T Consensus       250 ~~~~~~~~Di~slG~il~el~~~~~~~~-------~~~~~~-~~~~~~~~~---~~~~---~-~~~~~~~li~~~l~~~p  314 (332)
T 3qd2_B          250 GNNYSHKVDIFSLGLILFELLYSFSTQM-------ERVRII-TDVRNLKFP---LLFT---Q-KYPQEHMMVQDMLSPSP  314 (332)
T ss_dssp             CCCCCTHHHHHHHHHHHHHHHSCCCCHH-------HHHHHH-HHHHTTCCC---HHHH---H-HCHHHHHHHHHHHCSSG
T ss_pred             CCCCcchhhHHHHHHHHHHHHHcCCChh-------HHHHHH-HHhhccCCC---cccc---c-CChhHHHHHHHHccCCC
Confidence            3467899999999999999999866532       111111 111111111   1110   0 01167889999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.++++
T Consensus       315 ~~Rps~~~~l~  325 (332)
T 3qd2_B          315 TERPEATDIIE  325 (332)
T ss_dssp             GGSCCHHHHHH
T ss_pred             CcCCCHHHHhh
Confidence            99999999875

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=98.89  E-value=4.7e-09  Score=75.12  Aligned_cols=87  Identities=10%  Similarity=0.075  Sum_probs=52.0

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccc---hhhhhhhhccCCC--------------CCH
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHI---FLCLWLIINLRHG--------------IYG   68 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~p~--------------~~~   68 (139)
                      .++.++||||+|++++++++|+.||.....  ......+........   ...+....+.++.              ...
T Consensus       180 ~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (299)
T 2r3i_A          180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSE--IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD  257 (299)
T ss_dssp             SCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCC
T ss_pred             cCChHHHHHHHHHHHHHHHhCCCCCCCccH--HHHHHHHHHHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCC
Confidence            368899999999999999999999864321  111111111111000   0000000000000              112


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           69 RTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        69 ~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ..+.+++.+|++.||.+||++.+++.
T Consensus       258 ~~~~~li~~~L~~dP~~Rpt~~~~l~  283 (299)
T 2r3i_A          258 EDGRSLLSQMLHYDPNKRISAKAALA  283 (299)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            37889999999999999999999986

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=98.89  E-value=1.4e-09  Score=81.08  Aligned_cols=28  Identities=32%  Similarity=0.403  Sum_probs=25.4

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCc
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEF   32 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~   32 (139)
                      ..++.++||||+||+++||++|+.||..
T Consensus       206 ~~~~~~~DiwSlG~il~ell~g~~pf~~  233 (388)
T 3oz6_A          206 TKYTKGIDMWSLGCILGEILCGKPIFPG  233 (388)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCC
Confidence            4688999999999999999999999864

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=98.89  E-value=2.1e-09  Score=78.94  Aligned_cols=87  Identities=13%  Similarity=0.047  Sum_probs=52.6

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccch------------h--------hhhhhhccCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIF------------L--------CLWLIINLRHG   65 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~--------~~~~~~d~~p~   65 (139)
                      .++.++||||+|+++|||++|+.||.....  ......+.........            .        .+.......+.
T Consensus       208 ~~~~~~Di~slG~il~ell~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (360)
T 3e3p_A          208 HYTTAVDIWSVGCIFAEMMLGEPIFRGDNS--AGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSL  285 (360)
T ss_dssp             SCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCC
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCcCCCCh--HHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhc
Confidence            478999999999999999999999864322  1111111111100000            0        00011100001


Q ss_pred             CCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           66 IYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        66 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      .....+.+++..||+.||.+||++.+++.
T Consensus       286 ~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  314 (360)
T 3e3p_A          286 KDAKEAYDLLSALLQYLPEERMKPYEALC  314 (360)
T ss_dssp             TTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             cccHHHHHHHHHHhccCccccCCHHHHhc
Confidence            12337889999999999999999999975

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=98.89  E-value=1.6e-09  Score=79.91  Aligned_cols=81  Identities=21%  Similarity=0.137  Sum_probs=52.0

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDR   86 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~R   86 (139)
                      ++.++||||+|++++||++|+.||........  .. +...+..+...    ............+.+++..|++.||.+|
T Consensus       197 ~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~--~~-~~~~i~~~~~~----~~~~~~~~~s~~~~~li~~~L~~dP~~R  269 (342)
T 2qr7_A          197 YDAACDIWSLGVLLYTMLTGYTPFANGPDDTP--EE-ILARIGSGKFS----LSGGYWNSVSDTAKDLVSKMLHVDPHQR  269 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCH--HH-HHHHHHHCCCC----CCSTTTTTSCHHHHHHHHHHTCSSTTTS
T ss_pred             CCCccCeeeHhHHHHHHhcCCCCCCCCCcCCH--HH-HHHHHccCCcc----cCccccccCCHHHHHHHHHHCCCChhHC
Confidence            56789999999999999999999864322111  11 11112122211    0000011122378899999999999999


Q ss_pred             CCHHHHHH
Q 047465           87 PTVYDVVS   94 (139)
Q Consensus        87 ps~~~v~~   94 (139)
                      |++.+++.
T Consensus       270 ~t~~~il~  277 (342)
T 2qr7_A          270 LTAALVLR  277 (342)
T ss_dssp             CCHHHHTT
T ss_pred             cCHHHHhc
Confidence            99999885

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=98.88  E-value=1.6e-09  Score=79.54  Aligned_cols=88  Identities=9%  Similarity=-0.055  Sum_probs=52.1

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhc------------cCCC-------
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIIN------------LRHG-------   65 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------------~~p~-------   65 (139)
                      ..++.++||||+|++++||++|+.|+.....  ......+...........++.+.+            .+..       
T Consensus       204 ~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (351)
T 3mi9_A          204 RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE--QHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKA  281 (351)
T ss_dssp             CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHH
T ss_pred             CCCCcHhHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhh
Confidence            3478999999999999999999999864322  111111211111000000000000            0000       


Q ss_pred             -CCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           66 -IYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        66 -~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                       .....+.+++.+|++.||.+||++.++++
T Consensus       282 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  311 (351)
T 3mi9_A          282 YVRDPYALDLIDKLLVLDPAQRIDSDDALN  311 (351)
T ss_dssp             HHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence             00125788999999999999999999875

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=98.88  E-value=4.9e-09  Score=76.10  Aligned_cols=88  Identities=13%  Similarity=0.098  Sum_probs=52.9

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhcc---chhhhh------------------hhhc-c
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSH---IFLCLW------------------LIIN-L   62 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~------------------~~~d-~   62 (139)
                      ..++.++||||+|++++||++|+.||.....  ......+.......   ....+.                  ..+. .
T Consensus       184 ~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (317)
T 2pmi_A          184 RTYSTSIDIWSCGCILAEMITGKPLFPGTND--EEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPH  261 (317)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGG
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhccc
Confidence            3578999999999999999999999864322  11111111111100   000000                  0000 0


Q ss_pred             CCCCCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           63 RHGIYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        63 ~p~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      .+......+.+++..|++.||.+||++.+++.
T Consensus       262 ~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          262 TKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             CSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence            01112237889999999999999999998864

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=98.88  E-value=3.8e-09  Score=76.21  Aligned_cols=67  Identities=13%  Similarity=0.305  Sum_probs=48.5

Q ss_pred             CccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCCC
Q 047465            8 SIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRP   87 (139)
Q Consensus         8 s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~Rp   87 (139)
                      +.++||||+|++++|+++|+.|+...     .      .......     .+    +......+.+++..||+.+|.+||
T Consensus       217 ~~~~Di~slG~il~~l~~g~~pf~~~-----~------~~~~~~~-----~~----~~~~~~~~~~li~~~l~~~p~~Rp  276 (312)
T 2iwi_A          217 ALPATVWSLGILLYDMVCGDIPFERD-----Q------EILEAEL-----HF----PAHVSPDCCALIRRCLAPKPSSRP  276 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCSCCSH-----H------HHHHTCC-----CC----CTTSCHHHHHHHHHHTCSSTTTSC
T ss_pred             CccchHHHHHHHHHHHHHCCCCCCCh-----H------HHhhhcc-----CC----cccCCHHHHHHHHHHccCChhhCc
Confidence            45899999999999999999988521     1      0011111     11    222233788999999999999999


Q ss_pred             CHHHHHH
Q 047465           88 TVYDVVS   94 (139)
Q Consensus        88 s~~~v~~   94 (139)
                      ++.+++.
T Consensus       277 s~~e~l~  283 (312)
T 2iwi_A          277 SLEEILL  283 (312)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHhc
Confidence            9999986

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=98.88  E-value=6.8e-09  Score=76.22  Aligned_cols=88  Identities=10%  Similarity=-0.046  Sum_probs=52.6

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhh---c-----cCC--------CCCHH
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII---N-----LRH--------GIYGR   69 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d-----~~p--------~~~~~   69 (139)
                      .++.++||||+|++++||++|..++.....  ......+...........++...   +     ..+        .....
T Consensus       189 ~~~~~~DiwslG~il~ell~g~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (346)
T 1ua2_A          189 MYGVGVDMWAVGCILAELLLRVPFLPGDSD--LDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGD  266 (346)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCH
T ss_pred             CCCchhhhHhHHHHHHHHHHCCCCCCCCCH--HHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCH
Confidence            478899999999999999999988753221  11111111111110000000000   0     000        11123


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHH
Q 047465           70 TTGHWTLLCAQESADDRPTVYDVVSM   95 (139)
Q Consensus        70 ~~~~l~~~C~~~~p~~Rps~~~v~~~   95 (139)
                      .+.+++..|++.+|.+||++.+++..
T Consensus       267 ~~~~li~~~L~~dP~~Rpt~~ell~h  292 (346)
T 1ua2_A          267 DLLDLIQGLFLFNPCARITATQALKM  292 (346)
T ss_dssp             HHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHHHHhccChhhCCCHHHHhcC
Confidence            78899999999999999999999864

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=98.87  E-value=4.7e-09  Score=78.15  Aligned_cols=84  Identities=13%  Similarity=0.026  Sum_probs=52.8

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccch--------------------hhhhhhhccCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIF--------------------LCLWLIINLRHG   65 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~d~~p~   65 (139)
                      .++.++||||+|++++||++|+.||..... ...+...+ ........                    ..+....   +.
T Consensus       218 ~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~~~~i~-~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~  292 (383)
T 3eb0_A          218 EYTPSIDLWSIGCVFGELILGKPLFSGETS-IDQLVRII-QIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKIL---PE  292 (383)
T ss_dssp             SCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHH-HHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHS---CT
T ss_pred             CCCcchhhhhHHHHHHHHHhCCCCCCCCCh-HHHHHHHH-HHhCCCCHHHHHHhCcccccccCCccCcccHHhhC---CC
Confidence            478999999999999999999999864322 11111111 11100000                    0000111   11


Q ss_pred             CCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           66 IYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        66 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      .....+.+++.+||+.+|.+||++.+++.
T Consensus       293 ~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (383)
T 3eb0_A          293 GTPSLAIDLLEQILRYEPDLRINPYEAMA  321 (383)
T ss_dssp             TCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             CCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            12236889999999999999999999985

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=98.87  E-value=5.1e-09  Score=79.07  Aligned_cols=84  Identities=12%  Similarity=-0.002  Sum_probs=53.1

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccch---------------h-----hhhhhhccCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIF---------------L-----CLWLIINLRHG   65 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~-----~~~~~~d~~p~   65 (139)
                      .++.++||||+||++|||++|+.||..... ...+...+ ........               +     .|..++.  +.
T Consensus       233 ~~~~~~DiwSlG~il~ell~G~~pf~~~~~-~~~l~~i~-~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~--~~  308 (420)
T 1j1b_A          233 DYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEII-KVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR--PR  308 (420)
T ss_dssp             SCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHH-HHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSC--TT
T ss_pred             CCCchhhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHH-HHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcC--CC
Confidence            688999999999999999999999864321 11111111 11100000               0     0001111  11


Q ss_pred             CCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           66 IYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        66 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      . ...+.+++.+|++.+|.+||++.+++.
T Consensus       309 ~-~~~~~~Li~~~L~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          309 T-PPEAIALCSRLLEYTPTARLTPLEACA  336 (420)
T ss_dssp             S-CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             C-CHHHHHHHHHhccCChhHCCCHHHHhC
Confidence            1 237889999999999999999999985

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=98.86  E-value=3e-09  Score=77.89  Aligned_cols=93  Identities=11%  Similarity=0.032  Sum_probs=54.6

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccc----hhh-----hhhhhc---cC--------C
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHI----FLC-----LWLIIN---LR--------H   64 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-----~~~~~d---~~--------p   64 (139)
                      ..++.++||||+|++++||++|+.||.....  ......+........    ..+     ..+...   ..        .
T Consensus       198 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (353)
T 2b9h_A          198 AKYSRAMDVWSCGCILAELFLRRPIFPGRDY--RHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMF  275 (353)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHS
T ss_pred             CCccchhhHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhc
Confidence            5678899999999999999999999864321  111111111100000    000     000000   00        0


Q ss_pred             CCCHHHHHHHHHHhcccCCCCCCCHHHHHH--HHhcc
Q 047465           65 GIYGRTTGHWTLLCAQESADDRPTVYDVVS--MLTNE   99 (139)
Q Consensus        65 ~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~--~L~~~   99 (139)
                      ......+.+++.+||+.||.+||++.++++  ++...
T Consensus       276 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  312 (353)
T 2b9h_A          276 PRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTY  312 (353)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             ccCCHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence            112237889999999999999999999986  34443

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=98.86  E-value=5.3e-09  Score=78.31  Aligned_cols=86  Identities=14%  Similarity=0.059  Sum_probs=53.3

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHH----------hhccc----hh-----hhhhhhccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRV----------ANSHI----FL-----CLWLIINLRHGI   66 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~----~~-----~~~~~~d~~p~~   66 (139)
                      .++.++||||+|++++||++|+.||..... ...+.......          .....    ..     .+.....  +. 
T Consensus       218 ~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-  293 (394)
T 4e7w_A          218 NYTTNIDIWSTGCVMAELMQGQPLFPGESG-IDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFR--PR-  293 (394)
T ss_dssp             SCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSC--TT-
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhcc--cc-
Confidence            588999999999999999999999864322 11111111100          00000    00     0001111  11 


Q ss_pred             CHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047465           67 YGRTTGHWTLLCAQESADDRPTVYDVVSM   95 (139)
Q Consensus        67 ~~~~~~~l~~~C~~~~p~~Rps~~~v~~~   95 (139)
                      ....+.+++.+||+.+|.+||++.+++..
T Consensus       294 ~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          294 TPPDAIDLISRLLEYTPSARLTAIEALCH  322 (394)
T ss_dssp             CCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             CCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence            22378899999999999999999999863

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=98.86  E-value=2.6e-10  Score=84.02  Aligned_cols=73  Identities=14%  Similarity=0.232  Sum_probs=50.5

Q ss_pred             CccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCCC
Q 047465            8 SIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDRP   87 (139)
Q Consensus         8 s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~Rp   87 (139)
                      +.++||||+|+++++|++|+.||........  .    .....+..    .+    |......+.+++..|++.||.+||
T Consensus       186 ~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~--~----~~i~~~~~----~~----p~~~s~~~~~li~~~L~~dP~~Rp  251 (336)
T 3h4j_B          186 GPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL--F----KKVNSCVY----VM----PDFLSPGAQSLIRRMIVADPMQRI  251 (336)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC--B----CCCCSSCC----CC----CTTSCHHHHHHHHTTSCSSGGGSC
T ss_pred             CCccchhHHHHHHHHHHhCCCCCCCccHHHH--H----HHHHcCCC----CC----cccCCHHHHHHHHHHcCCChhHCc
Confidence            6789999999999999999999864221100  0    00000100    00    333334788999999999999999


Q ss_pred             CHHHHHH
Q 047465           88 TVYDVVS   94 (139)
Q Consensus        88 s~~~v~~   94 (139)
                      ++.++++
T Consensus       252 t~~eil~  258 (336)
T 3h4j_B          252 TIQEIRR  258 (336)
T ss_dssp             CHHHHTT
T ss_pred             CHHHHHh
Confidence            9999975

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=98.86  E-value=7.9e-09  Score=76.35  Aligned_cols=87  Identities=14%  Similarity=-0.013  Sum_probs=52.2

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchh------------hhhhhhccC-------CCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFL------------CLWLIINLR-------HGI   66 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~d~~-------p~~   66 (139)
                      .++.++||||+|++++||++|+.||......  .....+..........            .........       ...
T Consensus       208 ~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (364)
T 3qyz_A          208 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYL--DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN  285 (364)
T ss_dssp             SCSTHHHHHHHHHHHHHHHHSSCSSCCSSGG--GHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTT
T ss_pred             CCCcchhHHHHHHHHHHHHHCCCCCCCCChH--HHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCC
Confidence            4788999999999999999999998643221  1111111111000000            000000000       011


Q ss_pred             CHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           67 YGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        67 ~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ....+.+++..|++.||.+||++.+++.
T Consensus       286 ~~~~~~~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          286 ADSKALDLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            1237889999999999999999999986

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=98.86  E-value=6e-09  Score=78.11  Aligned_cols=79  Identities=18%  Similarity=0.188  Sum_probs=52.1

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++|+||+|+++|||++|+.||........  ...... ......    ..    |......+..++..||+.+|.
T Consensus       192 ~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~--~~~~~~-~~~~~~----~~----p~~~s~~~~~li~~lL~~dP~  260 (384)
T 4fr4_A          192 AGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS--KEIVHT-FETTVV----TY----PSAWSQEMVSLLKKLLEPNPD  260 (384)
T ss_dssp             CCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH--HHHHHH-HHHCCC----CC----CTTSCHHHHHHHHHHSCSSGG
T ss_pred             CCCCccceeechHHHHHHHHhCCCCCCCCCCccH--HHHHHH-Hhhccc----CC----CCcCCHHHHHHHHHHhcCCHh
Confidence            3578899999999999999999999854322111  111111 111111    11    333334889999999999999


Q ss_pred             CCCC-HHHHHH
Q 047465           85 DRPT-VYDVVS   94 (139)
Q Consensus        85 ~Rps-~~~v~~   94 (139)
                      +||+ +.++..
T Consensus       261 ~R~s~~~~l~~  271 (384)
T 4fr4_A          261 QRFSQLSDVQN  271 (384)
T ss_dssp             GSCCSHHHHHT
T ss_pred             HhcccHHHHHc
Confidence            9998 666653

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=98.86  E-value=5.2e-09  Score=77.54  Aligned_cols=77  Identities=13%  Similarity=0.095  Sum_probs=51.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++|+||+|++++||++|+.||.....  .   .............         |......+..++..|++.+|
T Consensus       195 ~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~---~~~~~i~~~~~~~---------p~~~s~~~~~li~~lL~~dP  260 (353)
T 2i0e_A          195 YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--D---ELFQSIMEHNVAY---------PKSMSKEAVAICKGLMTKHP  260 (353)
T ss_dssp             TCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--H---HHHHHHHHCCCCC---------CTTSCHHHHHHHHHHTCSCT
T ss_pred             CCCcCCcccccchHHHHHHHHcCCCCCCCCCH--H---HHHHHHHhCCCCC---------CCCCCHHHHHHHHHHhhcCH
Confidence            45678899999999999999999999853211  1   1111112111111         22233478899999999999


Q ss_pred             CCCCC-----HHHHHH
Q 047465           84 DDRPT-----VYDVVS   94 (139)
Q Consensus        84 ~~Rps-----~~~v~~   94 (139)
                      .+||+     +.+++.
T Consensus       261 ~~R~~~~~~~~~~i~~  276 (353)
T 2i0e_A          261 GKRLGCGPEGERDIKE  276 (353)
T ss_dssp             TSCTTCSTTHHHHHHT
T ss_pred             HHcCCCCCCCHHHHhc
Confidence            99996     466653

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=98.85  E-value=5.1e-09  Score=74.93  Aligned_cols=88  Identities=9%  Similarity=0.022  Sum_probs=51.2

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccc---hhhhhhhhccC--------------CCCCH
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHI---FLCLWLIINLR--------------HGIYG   68 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~--------------p~~~~   68 (139)
                      .++.++||||+|++++||++|+.|+..... .......+........   ...+....+..              .....
T Consensus       178 ~~~~~~DiwslG~il~~l~~~~~p~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (292)
T 3o0g_A          178 LYSTSIDMWSAGCIFAELANAGRPLFPGND-VDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLN  256 (292)
T ss_dssp             CCCTHHHHHHHHHHHHHHTTTSCCSCCCSS-HHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCC
T ss_pred             CcCchHHHHHHHHHHHHHHHcCCCCcCCCC-HHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccC
Confidence            378999999999999999998888532211 1111222211111100   00000000000              00112


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           69 RTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        69 ~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ..+.+++..|++.||.+||++.++++
T Consensus       257 ~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          257 ATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hHHHHHHHHHhccChhhCCCHHHHhc
Confidence            37789999999999999999999875

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=98.85  E-value=3.4e-09  Score=78.45  Aligned_cols=75  Identities=13%  Similarity=0.132  Sum_probs=51.3

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      .++.++|+||+|++++||++|+.||.....  .   .............         |......+..++..|++.+|.+
T Consensus       200 ~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~---~~~~~i~~~~~~~---------p~~~~~~~~~li~~lL~~dP~~  265 (353)
T 3txo_A          200 LYGPAVDWWAMGVLLYEMLCGHAPFEAENE--D---DLFEAILNDEVVY---------PTWLHEDATGILKSFMTKNPTM  265 (353)
T ss_dssp             HCTTHHHHHHHHHHHHHHHHSSCSSCCSSH--H---HHHHHHHHCCCCC---------CTTSCHHHHHHHHHHTCSSGGG
T ss_pred             CcCCccCCCcchHHHHHHHhCCCCCCCCCH--H---HHHHHHHcCCCCC---------CCCCCHHHHHHHHHHhhhCHHH
Confidence            367899999999999999999999853221  1   1111112111111         3223347889999999999999


Q ss_pred             CCCH------HHHHH
Q 047465           86 RPTV------YDVVS   94 (139)
Q Consensus        86 Rps~------~~v~~   94 (139)
                      ||++      .+++.
T Consensus       266 R~~~~~~~~~~~il~  280 (353)
T 3txo_A          266 RLGSLTQGGEHAILR  280 (353)
T ss_dssp             STTSGGGTCTHHHHT
T ss_pred             ccCCcccCCHHHHhh
Confidence            9998      66664

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=98.85  E-value=4.9e-09  Score=77.76  Aligned_cols=88  Identities=18%  Similarity=0.095  Sum_probs=52.5

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccc-----------hh-hhhhhhc-cC------CC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHI-----------FL-CLWLIIN-LR------HG   65 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~-~~~~~~d-~~------p~   65 (139)
                      ..++.++||||+|+++++|++|+.||.....  ......+........           .. .+..+.. .+      ..
T Consensus       217 ~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (371)
T 4exu_A          217 MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY--LDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFP  294 (371)
T ss_dssp             SCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHST
T ss_pred             CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhcc
Confidence            5678999999999999999999999864321  111111111000000           00 0000000 00      01


Q ss_pred             CCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           66 IYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        66 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      .....+.+++..|++.+|.+||++.+++.
T Consensus       295 ~~~~~~~~li~~~L~~dP~~Rpt~~ell~  323 (371)
T 4exu_A          295 RASPQAADLLEKMLELDVDKRLTAAQALT  323 (371)
T ss_dssp             TSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             ccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence            11237889999999999999999999975

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=98.85  E-value=3.1e-09  Score=79.32  Aligned_cols=74  Identities=18%  Similarity=0.138  Sum_probs=49.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++|+||+|+++|||++|+.||.....  .   ...........     .+    +......+.+++..|++.+|
T Consensus       213 ~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~---~~~~~i~~~~~-----~~----~~~~~~~~~~li~~lL~~dp  278 (373)
T 2r5t_A          213 KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT--A---EMYDNILNKPL-----QL----KPNITNSARHLLEGLLQKDR  278 (373)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH--H---HHHHHHHHSCC-----CC----CSSSCHHHHHHHHHHTCSSG
T ss_pred             CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH--H---HHHHHHHhccc-----CC----CCCCCHHHHHHHHHHcccCH
Confidence            44578899999999999999999999853211  1   11111121111     11    22223378899999999999


Q ss_pred             CCCCCHHH
Q 047465           84 DDRPTVYD   91 (139)
Q Consensus        84 ~~Rps~~~   91 (139)
                      .+||++.+
T Consensus       279 ~~R~~~~~  286 (373)
T 2r5t_A          279 TKRLGAKD  286 (373)
T ss_dssp             GGSTTTTT
T ss_pred             HhCCCCCC
Confidence            99999853

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=98.85  E-value=2.7e-09  Score=77.99  Aligned_cols=83  Identities=14%  Similarity=0.155  Sum_probs=51.5

Q ss_pred             CCCc-cchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhh----hhc-c-------CCCCCHHHHH
Q 047465            6 VFSI-KSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWL----IIN-L-------RHGIYGRTTG   72 (139)
Q Consensus         6 ~~s~-k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d-~-------~p~~~~~~~~   72 (139)
                      .++. ++||||+|++++|+++|+.|+..... ......    .+..+... ++.    ... .       ........+.
T Consensus       227 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~~~----~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  300 (348)
T 2pml_X          227 SYNGAKVDIWSLGICLYVMFYNVVPFSLKIS-LVELFN----NIRTKNIE-YPLDRNHFLYPLTNKKSTCSNNFLSNEDI  300 (348)
T ss_dssp             CEEHHHHHHHHHHHHHHHHHHSSCSSCCSSC-SHHHHH----HHTSCCCC-CCCSSSSSTTTTCC--------CCCHHHH
T ss_pred             CCCcchhhHHHHHHHHHHHHhCCCCCCCCCc-HHHHHH----HHhccCcC-CccchhhhhccccccccccchhhcCHHHH
Confidence            3445 89999999999999999999864322 111111    11111110 000    000 0       0012233788


Q ss_pred             HHHHHhcccCCCCCCCHHHHHH
Q 047465           73 HWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        73 ~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      +++..||+.+|.+||++.+++.
T Consensus       301 ~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          301 DFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             HHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHHHHccCChhhCCCHHHHhc
Confidence            9999999999999999999975

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=98.84  E-value=6.8e-09  Score=77.01  Aligned_cols=87  Identities=13%  Similarity=-0.015  Sum_probs=52.3

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhh-------------------ccc------hh-hhh
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVAN-------------------SHI------FL-CLW   57 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~------~~-~~~   57 (139)
                      +..++.++||||+|++++||++|+.||.....  ......+.....                   ...      .. .++
T Consensus       200 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (371)
T 2xrw_A          200 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH--IDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFP  277 (371)
T ss_dssp             TCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSC
T ss_pred             CCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcc
Confidence            44678999999999999999999999864321  111110100000                   000      00 000


Q ss_pred             hhhccCCCCC------HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           58 LIINLRHGIY------GRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        58 ~~~d~~p~~~------~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ...-  |...      ...+.+++.+|++.||.+||++.+++.
T Consensus       278 ~~~~--~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  318 (371)
T 2xrw_A          278 DVLF--PADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  318 (371)
T ss_dssp             GGGS--CCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             cccC--cccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence            0000  1110      226789999999999999999999986

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=98.84  E-value=8.1e-09  Score=79.05  Aligned_cols=90  Identities=13%  Similarity=-0.048  Sum_probs=53.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccch----------------------hhhhhhhc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIF----------------------LCLWLIIN   61 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~d   61 (139)
                      +..++.++||||+|++++||++|+.||.....  ......+.........                      ..++....
T Consensus       237 ~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~--~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (464)
T 3ttj_A          237 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDY--IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFP  314 (464)
T ss_dssp             TCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCc
Confidence            45688999999999999999999999864321  1111111111100000                      00000000


Q ss_pred             --cCCCCC------HHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047465           62 --LRHGIY------GRTTGHWTLLCAQESADDRPTVYDVVSM   95 (139)
Q Consensus        62 --~~p~~~------~~~~~~l~~~C~~~~p~~Rps~~~v~~~   95 (139)
                        .-+...      ...+.+++.+|++.||.+||++.++++.
T Consensus       315 ~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  356 (464)
T 3ttj_A          315 DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  356 (464)
T ss_dssp             GGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             ccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence              000000      2267889999999999999999999863

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=98.84  E-value=8.6e-09  Score=76.50  Aligned_cols=90  Identities=16%  Similarity=0.047  Sum_probs=55.5

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhcc-----------------------chhhhhhhhc
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSH-----------------------IFLCLWLIIN   61 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~d   61 (139)
                      ..++.++||||+|++++||++|+.||.....  ......+.......                       ....+..+  
T Consensus       201 ~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  276 (367)
T 1cm8_A          201 MRYTQTVDIWSVGCIMAEMITGKTLFKGSDH--LDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASI--  276 (367)
T ss_dssp             TCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGT--
T ss_pred             CCCChhhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHH--
Confidence            4688999999999999999999999864321  11111111100000                       00000000  


Q ss_pred             cCCCCCHHHHHHHHHHhcccCCCCCCCHHHHHH--HHhccc
Q 047465           62 LRHGIYGRTTGHWTLLCAQESADDRPTVYDVVS--MLTNEA  100 (139)
Q Consensus        62 ~~p~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~--~L~~~~  100 (139)
                        .......+.+++.+|++.||.+||++.+++.  .++...
T Consensus       277 --~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~  315 (367)
T 1cm8_A          277 --LTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  315 (367)
T ss_dssp             --CTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             --CCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence              0111237889999999999999999999987  355443

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=98.84  E-value=1.1e-08  Score=75.25  Aligned_cols=88  Identities=18%  Similarity=0.109  Sum_probs=52.4

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhcc-----------chh-hhhhhhc-cC------CC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSH-----------IFL-CLWLIIN-LR------HG   65 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~-~~~~~~d-~~------p~   65 (139)
                      ..++.++||||+|+++++|++|+.||.....  ......+.......           ... .+..+.. .+      ..
T Consensus       199 ~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (353)
T 3coi_A          199 MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY--LDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFP  276 (353)
T ss_dssp             SCCCTTHHHHHHHHHHHHHHHSSCSSBSSCH--HHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCT
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcC
Confidence            4678899999999999999999999864321  11111111100000           000 0000000 00      01


Q ss_pred             CCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           66 IYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        66 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      .....+.+++..|++.+|.+||++.+++.
T Consensus       277 ~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          277 RASPQAADLLEKMLELDVDKRLTAAQALT  305 (353)
T ss_dssp             TSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             CcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            11237889999999999999999999975

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=98.83  E-value=1.5e-09  Score=80.16  Aligned_cols=76  Identities=14%  Similarity=0.141  Sum_probs=51.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++|+||+|++++||++|+.||.....  ...   .........     .+    |......+.+++..|++.+|
T Consensus       192 ~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~---~~~i~~~~~-----~~----p~~~s~~~~~li~~lL~~dp  257 (345)
T 1xjd_A          192 GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--EEL---FHSIRMDNP-----FY----PRWLEKEAKDLLVKLFVREP  257 (345)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHH---HHHHHHCCC-----CC----CTTSCHHHHHHHHHHSCSSG
T ss_pred             CCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH--HHH---HHHHHhCCC-----CC----CcccCHHHHHHHHHHhcCCH
Confidence            45678999999999999999999999853221  111   111111111     11    22233478899999999999


Q ss_pred             CCCCCHH-HHH
Q 047465           84 DDRPTVY-DVV   93 (139)
Q Consensus        84 ~~Rps~~-~v~   93 (139)
                      .+||++. +++
T Consensus       258 ~~R~~~~~~i~  268 (345)
T 1xjd_A          258 EKRLGVRGDIR  268 (345)
T ss_dssp             GGSBTTBSCGG
T ss_pred             hHcCCChHHHH
Confidence            9999987 554

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=98.83  E-value=9.2e-09  Score=77.08  Aligned_cols=28  Identities=18%  Similarity=0.392  Sum_probs=24.9

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCc
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEF   32 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~   32 (139)
                      ..++.++||||+||+++||++|+.||..
T Consensus       211 ~~~~~~~DiwSlG~il~ell~g~~pf~~  238 (405)
T 3rgf_A          211 RHYTKAIDIWAIGCIFAELLTSEPIFHC  238 (405)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             CcccchhhhHHHHHHHHHHHhCCCCCCC
Confidence            3488999999999999999999999853

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=98.82  E-value=2.4e-09  Score=78.11  Aligned_cols=87  Identities=15%  Similarity=0.146  Sum_probs=51.5

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhc-----------c-chh--hhhhhhcc-----CCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANS-----------H-IFL--CLWLIINL-----RHGI   66 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~-~~~--~~~~~~d~-----~p~~   66 (139)
                      .++.++||||+|+++++|++|+.||...... ..... .......           . ...  .++.+...     ....
T Consensus       201 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (331)
T 4aaa_A          201 KYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI-DQLYH-IMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPK  278 (331)
T ss_dssp             TCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHH-HHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTT
T ss_pred             CcchHHHHHHHHHHHHHHHhCCCCCCCCCcH-HHHHH-HHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccc
Confidence            5788999999999999999999998643221 11111 1100000           0 000  00000000     0001


Q ss_pred             CHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           67 YGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        67 ~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ....+.+++..||+.+|.+||++.++++
T Consensus       279 ~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          279 LSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             hhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            1237889999999999999999998875

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=98.80  E-value=1.6e-08  Score=76.13  Aligned_cols=78  Identities=15%  Similarity=0.187  Sum_probs=49.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcC---chHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTD---SLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQ   80 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~   80 (139)
                      +..++.++|+||+|++++||++|+.||......   ...........+.....    .+    |......+..++..|++
T Consensus       227 ~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~----~~----p~~~s~~~~~li~~lL~  298 (396)
T 4dc2_A          227 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI----RI----PRSLSVKAASVLKSFLN  298 (396)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC----CC----CTTSCHHHHHHHHHHTC
T ss_pred             CCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc----CC----CCcCCHHHHHHHHHHhc
Confidence            456789999999999999999999998532111   00011111111111111    11    33333478899999999


Q ss_pred             cCCCCCCCH
Q 047465           81 ESADDRPTV   89 (139)
Q Consensus        81 ~~p~~Rps~   89 (139)
                      .+|.+||++
T Consensus       299 ~dP~~R~~~  307 (396)
T 4dc2_A          299 KDPKERLGC  307 (396)
T ss_dssp             SCTTTSTTC
T ss_pred             CCHhHcCCC
Confidence            999999985

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=98.80  E-value=1.1e-08  Score=76.11  Aligned_cols=88  Identities=17%  Similarity=0.041  Sum_probs=52.7

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhh--------hhhc---cCCC--------
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLW--------LIIN---LRHG--------   65 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~d---~~p~--------   65 (139)
                      ..++.++||||+|++++||++|+.||.....  ......+...........+.        ..+.   ..+.        
T Consensus       205 ~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (367)
T 2fst_X          205 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDH--IDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFI  282 (367)
T ss_dssp             CSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTT
T ss_pred             cCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCC
Confidence            4678999999999999999999999864322  11111111111000000000        0000   0000        


Q ss_pred             CCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           66 IYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        66 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      .....+.+++.+|++.||.+||++.+++.
T Consensus       283 ~~~~~~~dLl~~mL~~dP~~R~t~~e~L~  311 (367)
T 2fst_X          283 GANPLAVDLLEKMLVLDSDKRITAAQALA  311 (367)
T ss_dssp             TCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence            01226789999999999999999999986

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=98.80  E-value=9.3e-09  Score=82.13  Aligned_cols=78  Identities=13%  Similarity=0.101  Sum_probs=53.7

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .+..++.++|+||+|+++|||++|+.||.....     ..............         |......+.+++..|++.+
T Consensus       515 ~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~-----~~~~~~i~~~~~~~---------p~~~s~~~~~li~~lL~~d  580 (674)
T 3pfq_A          515 AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DELFQSIMEHNVAY---------PKSMSKEAVAICKGLMTKH  580 (674)
T ss_dssp             TCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHSSCCCC---------CTTSCHHHHHHHHHHSCSS
T ss_pred             cCCCCCccceEechHHHHHHHHcCCCCCCCCCH-----HHHHHHHHhCCCCC---------CccCCHHHHHHHHHHccCC
Confidence            345688999999999999999999999863221     11122222211111         3333348899999999999


Q ss_pred             CCCCCCH-----HHHHH
Q 047465           83 ADDRPTV-----YDVVS   94 (139)
Q Consensus        83 p~~Rps~-----~~v~~   94 (139)
                      |.+|+++     .+++.
T Consensus       581 P~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          581 PGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             STTCTTCSTTHHHHHHS
T ss_pred             HHHCCCCCCCcHHHHhc
Confidence            9999997     66653

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=98.79  E-value=1.2e-08  Score=75.16  Aligned_cols=88  Identities=10%  Similarity=-0.065  Sum_probs=52.3

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhh--------hhhhhc----cC--------C
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLC--------LWLIIN----LR--------H   64 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~d----~~--------p   64 (139)
                      ..++.++||||+|++++++++|+.||.....  ......+...........        ......    ..        +
T Consensus       209 ~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (362)
T 3pg1_A          209 KGFTKLVDMWSAGCVMAEMFNRKALFRGSTF--YNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVV  286 (362)
T ss_dssp             TTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHS
T ss_pred             CCCCcHhHHHhHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhC
Confidence            4678999999999999999999999864221  111111111110000000        000000    00        0


Q ss_pred             CCCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           65 GIYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        65 ~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ......+.+++..|++.+|.+||++.+++.
T Consensus       287 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  316 (362)
T 3pg1_A          287 PTADPVALDLIAKMLEFNPQRRISTEQALR  316 (362)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence            111226889999999999999999999975

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=98.78  E-value=1.5e-08  Score=72.23  Aligned_cols=78  Identities=15%  Similarity=0.180  Sum_probs=47.4

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +.++.++||||+|+++|||++   |+..    ........ ..+...... ++.-.   +......+..++..||+.||.
T Consensus       206 ~~~~~~~Di~slG~il~~l~~---p~~~----~~~~~~~~-~~~~~~~~~-~~~~~---~~~~~~~~~~li~~~l~~dp~  273 (303)
T 1zy4_A          206 GHYNEKIDMYSLGIIFFEMIY---PFST----GMERVNIL-KKLRSVSIE-FPPDF---DDNKMKVEKKIIRLLIDHDPN  273 (303)
T ss_dssp             SCCCTHHHHHHHHHHHHHHHS---CCSS----HHHHHHHH-HHHHSTTCC-CCTTC---CTTTSHHHHHHHHHHTCSSGG
T ss_pred             CCCcchhhHHHHHHHHHHHHh---ccCC----chhHHHHH-Hhccccccc-cCccc---cccchHHHHHHHHHHHhcCcc
Confidence            367899999999999999998   3321    11111111 111111110 00111   111122678999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       274 ~Rps~~~ll~  283 (303)
T 1zy4_A          274 KRPGARTLLN  283 (303)
T ss_dssp             GSCCHHHHHH
T ss_pred             cCcCHHHHhC
Confidence            9999999975

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=98.78  E-value=1.3e-08  Score=75.05  Aligned_cols=78  Identities=15%  Similarity=0.187  Sum_probs=49.2

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcC---chHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTD---SLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQ   80 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~   80 (139)
                      +..++.++|+||+|++++||++|+.||......   ...........+.....    .+    |......+..++..|++
T Consensus       184 ~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~----~~----p~~~s~~~~~li~~lL~  255 (345)
T 3a8x_A          184 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI----RI----PRSLSVKAASVLKSFLN  255 (345)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC----CC----CTTSCHHHHHHHHHHTC
T ss_pred             CCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC----CC----CCCCCHHHHHHHHHHhc
Confidence            346788999999999999999999998532110   00111111111111111    11    22233478899999999


Q ss_pred             cCCCCCCCH
Q 047465           81 ESADDRPTV   89 (139)
Q Consensus        81 ~~p~~Rps~   89 (139)
                      .+|.+||++
T Consensus       256 ~dP~~R~~~  264 (345)
T 3a8x_A          256 KDPKERLGC  264 (345)
T ss_dssp             SSTTTSTTC
T ss_pred             CCHhHCCCC
Confidence            999999995

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=98.76  E-value=1.1e-08  Score=81.57  Aligned_cols=79  Identities=14%  Similarity=0.098  Sum_probs=52.5

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..|+.++|+||+||++|||++|+.||.........  ...........     .+    |......+.+++..|++.||.
T Consensus       366 ~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~--~i~~~i~~~~~-----~~----p~~~S~~a~dLI~~lL~~dP~  434 (689)
T 3v5w_A          366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EIDRMTLTMAV-----EL----PDSFSPELRSLLEGLLQRDVN  434 (689)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHH--HHHHHHHHCCC-----CC----CTTSCHHHHHHHHHHTCSCGG
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH--HHHHhhcCCCC-----CC----CccCCHHHHHHHHHHccCCHh
Confidence            46899999999999999999999999543221111  11111111111     11    322334789999999999999


Q ss_pred             CCCC-----HHHHHH
Q 047465           85 DRPT-----VYDVVS   94 (139)
Q Consensus        85 ~Rps-----~~~v~~   94 (139)
                      +|++     +.+++.
T Consensus       435 ~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          435 RRLGCLGRGAQEVKE  449 (689)
T ss_dssp             GCTTCSSSTHHHHTT
T ss_pred             HCCCCCCCCHHHHhc
Confidence            9998     566653

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=98.72  E-value=1.9e-08  Score=78.66  Aligned_cols=76  Identities=13%  Similarity=0.161  Sum_probs=49.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++|+||+|+++|||++|+.||...... ...............     ..    |......+..++..|++.+|
T Consensus       363 ~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~-~~~~~~~~~i~~~~~-----~~----p~~~s~~~~~li~~lL~~dP  432 (543)
T 3c4z_A          363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAV-----TY----PDKFSPASKDFCEALLQKDP  432 (543)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCC-CCHHHHHHHHHHCCC-----CC----CTTSCHHHHHHHHHHSCSSG
T ss_pred             CCCCChHHhcCcchHHHHHHHhCCCCCCCCccc-hhHHHHHHHHhhccc-----CC----CcccCHHHHHHHHHhccCCH
Confidence            456889999999999999999999998643221 111111111111111     11    22233478899999999999


Q ss_pred             CCCCCH
Q 047465           84 DDRPTV   89 (139)
Q Consensus        84 ~~Rps~   89 (139)
                      .+||++
T Consensus       433 ~~R~~~  438 (543)
T 3c4z_A          433 EKRLGF  438 (543)
T ss_dssp             GGSCCC
T ss_pred             hHCCCC
Confidence            999975

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=98.71  E-value=1e-08  Score=77.49  Aligned_cols=79  Identities=16%  Similarity=0.169  Sum_probs=51.9

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC-
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD-   85 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~-   85 (139)
                      ++.++|+||+|+++|||++|+.||.....     ..............   ...+  .......+..++..|++.+|.+ 
T Consensus       250 ~~~~~DiwSlGvilyell~G~~Pf~~~~~-----~~~~~~i~~~~~~~---~~p~--~~~~s~~~~~li~~lL~~~~~rl  319 (410)
T 3v8s_A          250 YGRECDWWSVGVFLYEMLVGDTPFYADSL-----VGTYSKIMNHKNSL---TFPD--DNDISKEAKNLICAFLTDREVRL  319 (410)
T ss_dssp             EETHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHHTHHHHC---CCCT--TCCCCHHHHHHHHHHSSCGGGCT
T ss_pred             CCCcceEecchHHHHHHHhCCCCCCCCCh-----hhHHHHHHhccccc---cCCC--cccccHHHHHHHHHHccChhhhC
Confidence            67899999999999999999999853211     11111111111111   1111  1122337889999999988888 


Q ss_pred             -CCCHHHHHHH
Q 047465           86 -RPTVYDVVSM   95 (139)
Q Consensus        86 -Rps~~~v~~~   95 (139)
                       |+++.+++..
T Consensus       320 gR~~~~ei~~H  330 (410)
T 3v8s_A          320 GRNGVEEIKRH  330 (410)
T ss_dssp             TSSCHHHHHTS
T ss_pred             CCCCHHHHhcC
Confidence             9999999863

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=98.68  E-value=1.8e-08  Score=79.29  Aligned_cols=81  Identities=11%  Similarity=0.096  Sum_probs=52.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++|+||+|++++||++|+.||....... .. ..+...+.... .   .+    +......+.+++..|++.+|
T Consensus       359 ~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~-~~-~~i~~~i~~~~-~---~~----p~~~s~~~~dLI~~lL~~dP  428 (576)
T 2acx_A          359 NERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KR-EEVERLVKEVP-E---EY----SERFSPQARSLCSQLLCKDP  428 (576)
T ss_dssp             TCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC-CH-HHHHHHHHHCC-C---CC----CTTSCHHHHHHHHHHTCSSG
T ss_pred             CCCCCccchHHHHHHHHHHHHhCCCCCcccccch-hH-HHHHHHhhccc-c---cC----CccCCHHHHHHHHHhccCCH
Confidence            3457889999999999999999999986432211 10 11111111111 0   11    22223378899999999999


Q ss_pred             CCCC-----CHHHHHH
Q 047465           84 DDRP-----TVYDVVS   94 (139)
Q Consensus        84 ~~Rp-----s~~~v~~   94 (139)
                      .+||     ++.+++.
T Consensus       429 ~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          429 AERLGCRGGSAREVKE  444 (576)
T ss_dssp             GGSTTCSSSHHHHHHT
T ss_pred             HHcCCCCCCCHHHHHh
Confidence            9999     6788774

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=98.68  E-value=5.2e-08  Score=73.76  Aligned_cols=30  Identities=10%  Similarity=0.008  Sum_probs=25.8

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHH--HHhcc
Q 047465           70 TTGHWTLLCAQESADDRPTVYDVVS--MLTNE   99 (139)
Q Consensus        70 ~~~~l~~~C~~~~p~~Rps~~~v~~--~L~~~   99 (139)
                      .+.+++.+||+.||.+||++.+++.  +++..
T Consensus       337 ~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  368 (432)
T 3n9x_A          337 DGINLLESMLKFNPNKRITIDQALDHPYLKDV  368 (432)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTT
T ss_pred             HHHHHHHHHhcCCcccCCCHHHHhcChhhhhc
Confidence            7889999999999999999999986  35544

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=98.67  E-value=6.1e-08  Score=73.67  Aligned_cols=26  Identities=12%  Similarity=0.038  Sum_probs=24.1

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHH
Q 047465           70 TTGHWTLLCAQESADDRPTVYDVVSM   95 (139)
Q Consensus        70 ~~~~l~~~C~~~~p~~Rps~~~v~~~   95 (139)
                      .+.+++.+|+..||.+||++.+++..
T Consensus       372 ~~~dLl~~mL~~dP~~R~t~~e~L~H  397 (458)
T 3rp9_A          372 DAIHLLKRMLVFNPNKRITINECLAH  397 (458)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHHHHhccCccccCCHHHHhcC
Confidence            78899999999999999999999873

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=98.64  E-value=5.1e-08  Score=74.22  Aligned_cols=81  Identities=16%  Similarity=0.108  Sum_probs=51.3

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +.++.++||||+|+++|||++|+.||.....  .   .............   .+.. ........+.+++.+|+..+|+
T Consensus       256 ~~~~~~~DvwSlGvil~elltG~~Pf~~~~~--~---~~~~~i~~~~~~~---~~p~-~~~~~s~~~~dLi~~lL~~~~~  326 (437)
T 4aw2_A          256 GRYGPECDWWSLGVCMYEMLYGETPFYAESL--V---ETYGKIMNHKERF---QFPT-QVTDVSENAKDLIRRLICSREH  326 (437)
T ss_dssp             CEECTHHHHHHHHHHHHHHHHSSCTTCCSSH--H---HHHHHHHTHHHHC---CCCS-SCCCSCHHHHHHHHTTSSCGGG
T ss_pred             CCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh--h---HHHHhhhhccccc---cCCc-ccccCCHHHHHHHHHHhccccc
Confidence            4578899999999999999999999853221  1   1111111111111   1100 0111233788899998887777


Q ss_pred             C--CCCHHHHHH
Q 047465           85 D--RPTVYDVVS   94 (139)
Q Consensus        85 ~--Rps~~~v~~   94 (139)
                      .  |+++.+++.
T Consensus       327 r~~r~~~~eil~  338 (437)
T 4aw2_A          327 RLGQNGIEDFKK  338 (437)
T ss_dssp             CTTTTTTHHHHT
T ss_pred             ccCCCCHHHHhC
Confidence            7  999999886

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=98.56  E-value=4.8e-08  Score=73.82  Aligned_cols=80  Identities=15%  Similarity=0.125  Sum_probs=49.8

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +.++.++|+||+|+++|||++|+.||.....  ..   ............   ..... +......+.+++.+|+. +|.
T Consensus       245 ~~~~~~~DiwSlGvilyelltG~~Pf~~~~~--~~---~~~~i~~~~~~~---~~p~~-~~~~s~~~~dli~~lL~-~p~  314 (412)
T 2vd5_A          245 GSYGPECDWWALGVFAYEMFYGQTPFYADST--AE---TYGKIVHYKEHL---SLPLV-DEGVPEEARDFIQRLLC-PPE  314 (412)
T ss_dssp             SEECTHHHHHHHHHHHHHHHHSSCTTCCSSH--HH---HHHHHHTHHHHC---CCC-----CCCHHHHHHHHTTSS-CGG
T ss_pred             CCCChHHhhhHHhHHHHHHHhCCCCCCCCCH--HH---HHHHHHhcccCc---CCCcc-ccCCCHHHHHHHHHHcC-Chh
Confidence            4578999999999999999999999853221  11   111111111100   00000 11223378899999998 999


Q ss_pred             CC---CCHHHHHH
Q 047465           85 DR---PTVYDVVS   94 (139)
Q Consensus        85 ~R---ps~~~v~~   94 (139)
                      +|   |++.+++.
T Consensus       315 ~Rlgr~~~~ei~~  327 (412)
T 2vd5_A          315 TRLGRGGAGDFRT  327 (412)
T ss_dssp             GCTTTTTHHHHHT
T ss_pred             hcCCCCCHHHHhc
Confidence            88   58888875

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=98.55  E-value=1.3e-07  Score=69.83  Aligned_cols=80  Identities=8%  Similarity=-0.086  Sum_probs=54.0

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||||+++|||++|+.|+.......             ....   ....  .......+.++...|++.+|
T Consensus       259 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-------------~~~~---~~~~--~~~~~~~~~~~~~~~l~~~p  320 (365)
T 3e7e_A          259 NKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE-------------CKPE---GLFR--RLPHLDMWNEFFHVMLNIPD  320 (365)
T ss_dssp             TCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-------------EEEC---SCCT--TCSSHHHHHHHHHHHHCCCC
T ss_pred             CCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-------------eeec---hhcc--ccCcHHHHHHHHHHHcCCCC
Confidence            4568899999999999999999999874321110             0000   1111  11223366778889999999


Q ss_pred             CCC-CCHHHHHHHHhcccC
Q 047465           84 DDR-PTVYDVVSMLTNEAT  101 (139)
Q Consensus        84 ~~R-ps~~~v~~~L~~~~~  101 (139)
                      .+| |++.++...|++...
T Consensus       321 ~~r~~~~~~l~~~l~~~l~  339 (365)
T 3e7e_A          321 CHHLPSLDLLRQKLKKVFQ  339 (365)
T ss_dssp             TTCCCCHHHHHHHHHHHHH
T ss_pred             CCcchHHHHHHHHHHHHHH
Confidence            998 677878777776544

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=98.47  E-value=3.2e-08  Score=79.04  Aligned_cols=83  Identities=13%  Similarity=0.157  Sum_probs=46.4

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHH-------HHH-h----hccchhhhhhhhccCCC-C---
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYY-------LRV-A----NSHIFLCLWLIINLRHG-I---   66 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~-------~~~-~----~~~~~~~~~~~~d~~p~-~---   66 (139)
                      .++.++.++||||+|++++++++|+.||.....    ...|.       ... .    ..+... +..... .+. .   
T Consensus       196 ~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~----~~~~~~~i~~~~~~~~~~~~~l~g~~~-~~~~lp-~p~~l~~~  269 (676)
T 3qa8_A          196 EQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ----PVQWHGKVREKSNEHIVVYDDLTGAVK-FSSVLP-TPNHLSGI  269 (676)
T ss_dssp             CCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH----HHHSSTTCC------CCSCCCCSSSCC-CCSSSC-CSCCCCGG
T ss_pred             ccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc----hhhhhhhhhcccchhhhhhhhhccccc-cccccC-Cchhhchh
Confidence            346788999999999999999999999853211    00100       000 0    000000 000000 011 1   


Q ss_pred             CHHHHHHHHHHhcccCCCCCCCHHH
Q 047465           67 YGRTTGHWTLLCAQESADDRPTVYD   91 (139)
Q Consensus        67 ~~~~~~~l~~~C~~~~p~~Rps~~~   91 (139)
                      ....+.+++..|+..||.+||++.+
T Consensus       270 ls~~L~dLI~~mL~~DP~kRPTa~e  294 (676)
T 3qa8_A          270 LAGKLERWLQCMLMWHQRQRGTDPQ  294 (676)
T ss_dssp             GHHHHHHHHHHHSCSSCC---CCTT
T ss_pred             hhHHHHHHHHHHccCCHhhCcCHHH
Confidence            1237889999999999999999866

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=98.14  E-value=1.1e-06  Score=70.01  Aligned_cols=72  Identities=15%  Similarity=0.178  Sum_probs=46.5

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDR   86 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~R   86 (139)
                      .+.++||||||+++++|++|..++.........         ......   ...        ..+..++.+||+.+|.+|
T Consensus       253 ~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~---------~~~~~~---~~~--------~~l~~li~~~l~~dP~~R  312 (681)
T 2pzi_A          253 PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLP---------EDDPVL---KTY--------DSYGRLLRRAIDPDPRQR  312 (681)
T ss_dssp             SCHHHHHHHHHHHHHHHHSCCCEETTEECSSCC---------TTCHHH---HHC--------HHHHHHHHHHTCSSGGGS
T ss_pred             CCCceehhhhHHHHHHHHhCCCCCccccccccc---------cccccc---ccC--------HHHHHHHhhhccCChhhC
Confidence            377999999999999999997776421110000         000000   111        167789999999999999


Q ss_pred             CC-HHHHHHHHhc
Q 047465           87 PT-VYDVVSMLTN   98 (139)
Q Consensus        87 ps-~~~v~~~L~~   98 (139)
                      |+ +.++...|..
T Consensus       313 ~~~~~~l~~~l~~  325 (681)
T 2pzi_A          313 FTTAEEMSAQLTG  325 (681)
T ss_dssp             CSSHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHH
Confidence            95 5555555554

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=94.08  E-value=0.043  Score=39.45  Aligned_cols=26  Identities=12%  Similarity=-0.141  Sum_probs=19.6

Q ss_pred             CCCccchhhhHhHH-HHHHHhCCCCCC
Q 047465            6 VFSIKSDIFSLGVL-MLEILSGKKNTE   31 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~-l~ei~~~~~~~~   31 (139)
                      ..+.++||||+++. ..+++.|..|+.
T Consensus       252 ~~~~~~Diwsl~~~~~~~~~~g~~p~~  278 (336)
T 2vuw_A          252 DGDYQFDIYRLMKKENNNRWGEYHPYS  278 (336)
T ss_dssp             CSSHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred             CCccceehhhhhCCCCcccccccCCCc
Confidence            34789999998766 666777877763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	139
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	9e-09
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	3e-08
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	7e-08
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	5e-07
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	5e-07
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-06
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-06
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-06
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	8e-06
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	8e-06
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-05
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-05
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-05
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	4e-05
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	6e-05
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	7e-05
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-04
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-04
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-04
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-04
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-04
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-04
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-04
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-04
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-04
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	0.001
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	0.002
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	0.002

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.1 bits (119), Expect = 9e-09
 Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 12/110 (10%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII 60
            AL G F+IKSD++S G+L+ E+ +  +     +   +   +         +        
Sbjct: 185 AALYGRFTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVLDQVERGYRMPCPPECPE 241

Query: 61  NLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRPA 110
           +L   +           C ++  ++RPT   + + L +  T+  P  +P 
Sbjct: 242 SLHDLM---------CQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 282

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.4 bits (115), Expect = 3e-08
 Identities = 15/100 (15%), Positives = 41/100 (41%), Gaps = 8/100 (8%)

Query: 4   EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLR 63
           +  +S +SD+++ G+++ E+++G+     Y   +    I ++            +  N  
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLP---YSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 239

Query: 64  HGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTL 103
             +           C ++  D+RP    +++ +   A +L
Sbjct: 240 KAMK-----RLMAECLKKKRDERPLFPQILASIELLARSL 274

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 7e-08
 Identities = 20/97 (20%), Positives = 38/97 (39%), Gaps = 12/97 (12%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII 60
                 F+ KSD++S GVL+ E+++        + D   F I    +    +    +   
Sbjct: 205 SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDITVYLLQGRRLLQPEYCPD 261

Query: 61  NLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLT 97
            L   +         L C    A+ RP+  ++VS ++
Sbjct: 262 PLYEVM---------LKCWHPKAEMRPSFSELVSRIS 289

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (106), Expect = 5e-07
 Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 12/96 (12%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII 60
                 +S KSD++S GVLM E+ S  K     + +     +         ++       
Sbjct: 173 VFSFSRYSSKSDVWSFGVLMWEVFSEGK---IPYENRSNSEVVEDISTGFRLYKPRLAST 229

Query: 61  NLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSML 96
           ++   +           C +E  +DRP    ++  L
Sbjct: 230 HVYQIM---------NHCWKERPEDRPAFSRLLRQL 256

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (106), Expect = 5e-07
 Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 12/96 (12%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII 60
                 F+  SD++S G++M E+++  +   +  ++  +               C   I 
Sbjct: 184 AISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIY 243

Query: 61  NLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSML 96
            L             + C Q+    RP   D+VS+L
Sbjct: 244 QL------------MMQCWQQERARRPKFADIVSIL 267

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 1e-06
 Identities = 14/102 (13%), Positives = 28/102 (27%), Gaps = 8/102 (7%)

Query: 5   GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRH 64
                ++DI+++G++  EI         +    L +        +      +     LR 
Sbjct: 193 FESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRP 252

Query: 65  GIYGRTTGHWT--------LLCAQESADDRPTVYDVVSMLTN 98
            I  R                C   +   R T   +   L+ 
Sbjct: 253 NIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 2e-06
 Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 16/98 (16%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIF--LCLWL 58
               G F+IKSD++S G+L+ EI++  +    Y   +   VI  L      +    C   
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRI--PYPGMTNPEVIQNLERGYRMVRPDNCPEE 238

Query: 59  IINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSML 96
           +  L              LC +E  +DRPT   + S+L
Sbjct: 239 LYQL------------MRLCWKERPEDRPTFDYLRSVL 264

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (101), Expect = 2e-06
 Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 17/124 (13%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII 60
                V++  SD++S GVL+ EI+S        +       +Y        +   L    
Sbjct: 197 SLNYSVYTTNSDVWSYGVLLWEIVSLGGT---PYCGMTCAELYEKLPQGYRLEKPLNCDD 253

Query: 61  NLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTN----EATTLNPSNRPAFSY-NI 115
            +   +           C +E   +RP+   ++  L        T +N +    F+Y  I
Sbjct: 254 EVYDLM---------RQCWREKPYERPSFAQILVSLNRMLEERKTYVNTTLYEKFTYAGI 304

Query: 116 STSS 119
             S+
Sbjct: 305 DCSA 308

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (97), Expect = 8e-06
 Identities = 16/96 (16%), Positives = 33/96 (34%), Gaps = 12/96 (12%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII 60
              + +++ +SD++S GVL+ EI +   +    +    +  ++ L      +        
Sbjct: 208 ALFDRIYTHQSDVWSFGVLLWEIFTLGGS---PYPGVPVEELFKLLKEGHRMDKPSNCTN 264

Query: 61  NLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSML 96
            L   +           C       RPT   +V  L
Sbjct: 265 ELYMMM---------RDCWHAVPSQRPTFKQLVEDL 291

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 41.8 bits (97), Expect = 8e-06
 Identities = 20/96 (20%), Positives = 40/96 (41%), Gaps = 12/96 (12%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII 60
                 ++ +SD+++ GV++ EI S       Y+  +   VIYY+R   + +       +
Sbjct: 213 SIFYNRYTTESDVWAYGVVLWEIFSYGLQ--PYYGMAHEEVIYYVR-DGNILACPENCPL 269

Query: 61  NLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSML 96
            L + +          LC  +   DRP+   +  +L
Sbjct: 270 ELYNLM---------RLCWSKLPADRPSFCSIHRIL 296

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 2e-05
 Identities = 17/96 (17%), Positives = 30/96 (31%), Gaps = 12/96 (12%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII 60
              E  FS KSD++S G+L+ EI S  +     +    +  +         +        
Sbjct: 171 ALREKKFSTKSDVWSFGILLWEIYSFGR---VPYPRIPLKDVVPRVEKGYKMDAPDGCPP 227

Query: 61  NLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSML 96
            +   +           C    A  RP+   +   L
Sbjct: 228 AVYEVM---------KNCWHLDAAMRPSFLQLREQL 254

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 2e-05
 Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 11/99 (11%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII 60
              EG+++IKSD++S G+L+ EI S   N   Y    +    Y L      +    +   
Sbjct: 237 SLFEGIYTIKSDVWSYGILLWEIFSLGVN--PYPGIPVDANFYKLIQNGFKMDQPFYATE 294

Query: 61  NLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNE 99
            +   +           C    +  RP+  ++ S L  +
Sbjct: 295 EIYIIM---------QSCWAFDSRKRPSFPNLTSFLGCQ 324

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.7 bits (92), Expect = 3e-05
 Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 12/96 (12%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII 60
                 FSIKSD+++ GVL+ EI +   +    +    +  +Y L   +  +        
Sbjct: 187 SLAYNKFSIKSDVWAFGVLLWEIATYGMS---PYPGIDLSQVYELLEKDYRMERPEGCPE 243

Query: 61  NLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSML 96
            +   +           C Q +  DRP+  ++    
Sbjct: 244 KVYELM---------RACWQWNPSDRPSFAEIHQAF 270

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 4e-05
 Identities = 14/97 (14%), Positives = 33/97 (34%), Gaps = 11/97 (11%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII 60
                 FS  SD +  GV + E+ +  +  E +   +   +++ +      +        
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQ--EPWIGLNGSQILHKIDKEGERLPRPEDCPQ 242

Query: 61  NLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLT 97
           ++ + +         + C     +DRPT   +   L 
Sbjct: 243 DIYNVM---------VQCWAHKPEDRPTFVALRDFLL 270

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.1 bits (90), Expect = 6e-05
 Identities = 19/125 (15%), Positives = 36/125 (28%), Gaps = 12/125 (9%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVI---YYLRVANSHIFLCLW 57
             L    S + D+ SLG +++    G    +     +           +++     LC  
Sbjct: 184 THLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKG 243

Query: 58  LIINLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRPAFSYNIST 117
                   +           C     DD+P    +  +  N       S    F +N+  
Sbjct: 244 YPSEFATYL---------NFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 294

Query: 118 SSASK 122
             AS+
Sbjct: 295 FGASR 299

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.0 bits (90), Expect = 7e-05
 Identities = 17/96 (17%), Positives = 35/96 (36%), Gaps = 12/96 (12%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII 60
                 F+  SD++S G++M E++S  +     + D     +      +  +   +    
Sbjct: 204 AIQYRKFTSASDVWSYGIVMWEVMSYGE---RPYWDMTNQDVINAIEQDYRLPPPMDCPS 260

Query: 61  NLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSML 96
            L   +         L C Q+  + RP    +V+ L
Sbjct: 261 ALHQLM---------LDCWQKDRNHRPKFGQIVNTL 287

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 1e-04
 Identities = 8/27 (29%), Positives = 18/27 (66%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGK 27
                 +S++SDI+S+G+ ++E+  G+
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGR 200

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (88), Expect = 1e-04
 Identities = 19/98 (19%), Positives = 30/98 (30%), Gaps = 12/98 (12%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII 60
                 FS KSD++S GVLM E  S  +     +       +  +      +        
Sbjct: 181 CINYYKFSSKSDVWSFGVLMWEAFSYGQ---KPYRGMKGSEVTAMLEKGERMGCPAGCPR 237

Query: 61  NLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTN 98
            +   +          LC     ++RP    V   L N
Sbjct: 238 EMYDLM---------NLCWTYDVENRPGFAAVELRLRN 266

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (88), Expect = 1e-04
 Identities = 17/124 (13%), Positives = 40/124 (32%), Gaps = 14/124 (11%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII 60
             L  +++ +SD++S GV + E+++        +       I  +      +       I
Sbjct: 184 SILHRIYTHQSDVWSYGVTVWELMTFGS---KPYDGIPASEISSILEKGERLPQPPICTI 240

Query: 61  NLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRPAFSYNISTSSA 120
           ++   +         + C    AD RP   +++          +P        +      
Sbjct: 241 DVYMIM---------VKCWMIDADSRPKFRELIIEF--SKMARDPQRYLVIQGDERMHLP 289

Query: 121 SKTE 124
           S T+
Sbjct: 290 SPTD 293

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 1e-04
 Identities = 22/115 (19%), Positives = 45/115 (39%), Gaps = 16/115 (13%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII 60
              +GVF+  SD++S GV++ EI +  +      ++  +               C  ++ 
Sbjct: 206 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 265

Query: 61  NLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNR-PAFSYN 114
            L              +C Q +   RP+  +++S +  E   + P  R  +F Y+
Sbjct: 266 EL------------MRMCWQYNPKMRPSFLEIISSIKEE---MEPGFREVSFYYS 305

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 1e-04
 Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 12/98 (12%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII 60
             +   FS KSDI++ GVLM EI S  K     +T+S         +      L    + 
Sbjct: 172 VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVY 231

Query: 61  NLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTN 98
            +               C  E AD+RPT   ++S + +
Sbjct: 232 TI------------MYSCWHEKADERPTFKILLSNILD 257

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 2e-04
 Identities = 14/94 (14%), Positives = 38/94 (40%), Gaps = 15/94 (15%)

Query: 3   LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII-- 60
            E  +    D+++ G+ MLE+ + +      +++       Y RV +         +   
Sbjct: 185 YEEKYDESVDVYAFGMCMLEMATSEYP----YSECQNAAQIYRRVTSGVKPASFDKVAIP 240

Query: 61  NLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVS 94
            ++  I           C +++ D+R ++ D+++
Sbjct: 241 EVKEII---------EGCIRQNKDERYSIKDLLN 265

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 2e-04
 Identities = 19/96 (19%), Positives = 30/96 (31%), Gaps = 12/96 (12%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII 60
                 FS +SD++S GV M E LS  +    Y       V+ ++      +        
Sbjct: 183 CINFRKFSSRSDVWSYGVTMWEALSYGQK--PYKKMKGPEVMAFIE-QGKRMECPPECPP 239

Query: 61  NLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSML 96
            L   +           C     +DRP    V   +
Sbjct: 240 ELYALM---------SDCWIYKWEDRPDFLTVEQRM 266

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (86), Expect = 2e-04
 Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 11/98 (11%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII 60
              + V++I+SD++S GVL+ EI S   +   Y    +           + +    +   
Sbjct: 207 TIFDRVYTIQSDVWSFGVLLWEIFSLGAS--PYPGVKIDEEFCRRLKEGTRMRAPDYTTP 264

Query: 61  NLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTN 98
            +   +         L C       RPT  ++V  L N
Sbjct: 265 EMYQTM---------LDCWHGEPSQRPTFSELVEHLGN 293

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (86), Expect = 2e-04
 Identities = 14/99 (14%), Positives = 32/99 (32%), Gaps = 11/99 (11%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII 60
                V++ +SD++S G+ + E+ S   +   Y    +    Y +      +        
Sbjct: 218 SIFNCVYTFESDVWSYGIFLWELFSLGSS--PYPGMPVDSKFYKMIKEGFRMLSPEHAPA 275

Query: 61  NLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNE 99
            +   +           C       RPT   +V ++  +
Sbjct: 276 EMYDIM---------KTCWDADPLKRPTFKQIVQLIEKQ 305

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (80), Expect = 0.001
 Identities = 14/98 (14%), Positives = 27/98 (27%), Gaps = 12/98 (12%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLII 60
                 F+  SD++  GV M EIL           ++    +         + +      
Sbjct: 180 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN---DVIGRIENGERLPMPPNCPP 236

Query: 61  NLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTN 98
            L   +           C       RP   ++ + L+ 
Sbjct: 237 TLYSLM---------TKCWAYDPSRRPRFTELKAQLST 265

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 34.8 bits (79), Expect = 0.002
 Identities = 15/112 (13%), Positives = 32/112 (28%), Gaps = 12/112 (10%)

Query: 7   FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSL---IFVIYYLRVANSHIFLCLWLIINLR 63
            S + D+ +LG + +  L G    +     +       I   + +     LC        
Sbjct: 190 QSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFY 249

Query: 64  HGIYGRTTGHWTLLCAQESADDRPTVYDVVSMLTNEATTLNPSNRPAFSYNI 115
             +               + D  P    +  + +     LN +    F +N+
Sbjct: 250 KYM---------HYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDWNL 292

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (79), Expect = 0.002
 Identities = 8/27 (29%), Positives = 16/27 (59%)

Query: 1   YALEGVFSIKSDIFSLGVLMLEILSGK 27
                 +  K DI+SLG++ +E++ G+
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGE 213

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	139
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.61
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.56
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.54
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.52
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.52
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.52
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.52
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.51
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.5
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.5
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.5
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.5
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.5
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.49
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.49
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.48
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.46
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.46
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.46
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.45
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.44
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.44
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.41
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.38
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.38
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.37
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.36
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.33
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.32
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.32
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.3
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.3
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.29
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.26
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.22
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.21
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.2
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.2
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.18
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.17
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.16
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.16
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.14
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.13
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.13
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.13
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.13
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.12
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.12
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.1
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.1
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.08
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.06
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.03
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	98.95
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	98.95
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	98.94
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	98.86
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	98.86
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	98.76
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.76

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=6.1e-16  Score=109.77  Aligned_cols=92  Identities=13%  Similarity=0.245  Sum_probs=62.8

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +.++.++|||||||++|||++|+.||..... ...    +......+....  ..... +...+..+.+++.+||+.+|.
T Consensus       184 ~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~-~~~----~~~~~~~~~~~p--~~~~~-~~~~~~~l~~li~~cl~~dp~  255 (276)
T d1uwha_         184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINN-RDQ----IIFMVGRGYLSP--DLSKV-RSNCPKAMKRLMAECLKKKRD  255 (276)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-HHH----HHHHHHHTSCCC--CGGGS-CTTCCHHHHHHHHHHTCSSGG
T ss_pred             CCCCchhhhhhhHHHHHHHHHCCCCCCCCCh-HHH----HHHHHhcCCCCC--cchhc-cccchHHHHHHHHHHcCCCHh
Confidence            4578999999999999999999999864322 111    111122222110  11100 222234889999999999999


Q ss_pred             CCCCHHHHHHHHhcccCCCC
Q 047465           85 DRPTVYDVVSMLTNEATTLN  104 (139)
Q Consensus        85 ~Rps~~~v~~~L~~~~~~~~  104 (139)
                      +||++.+++..|+.+.+.++
T Consensus       256 ~RPt~~~il~~Le~l~~~~P  275 (276)
T d1uwha_         256 ERPLFPQILASIELLARSLP  275 (276)
T ss_dssp             GSCCHHHHHHHHHHHHHTCC
T ss_pred             HCcCHHHHHHHHHHHHHcCC
Confidence            99999999999998876543

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.5e-15  Score=106.85  Aligned_cols=87  Identities=24%  Similarity=0.236  Sum_probs=61.6

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .++.++.++|||||||++|||++++.|+..... ......    .+..+...     ..  |...+..+.+++..||+.+
T Consensus       175 ~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~-~~~~~~----~i~~~~~~-----~~--p~~~~~~l~~li~~cl~~~  242 (263)
T d1sm2a_         175 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-NSEVVE----DISTGFRL-----YK--PRLASTHVYQIMNHCWKER  242 (263)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCC-HHHHHH----HHHHTCCC-----CC--CTTSCHHHHHHHHHHTCSS
T ss_pred             cCCCCCchhhhcchHHHHHHHHHCCCCCCCCCC-HHHHHH----HHHhcCCC-----CC--ccccCHHHHHHHHHHccCC
Confidence            456789999999999999999996555432211 111222    22222222     12  5555668999999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.++++.|+++.+
T Consensus       243 p~~Rps~~~il~~L~~i~e  261 (263)
T d1sm2a_         243 PEDRPAFSRLLRQLAEIAE  261 (263)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             HhHCcCHHHHHHHHHHHHh
Confidence            9999999999999987643

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.54  E-value=4.1e-15  Score=106.51  Aligned_cols=86  Identities=20%  Similarity=0.202  Sum_probs=61.8

Q ss_pred             CCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      .++.++.++|||||||++|||++ |+.||....  .....    ..+..+...   +.    |......+.+++..||+.
T Consensus       206 ~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~--~~~~~----~~i~~~~~~---~~----~~~~~~~l~~li~~cl~~  272 (299)
T d1jpaa_         206 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT--NQDVI----NAIEQDYRL---PP----PMDCPSALHQLMLDCWQK  272 (299)
T ss_dssp             HSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--HHHHH----HHHHTTCCC---CC----CTTCCHHHHHHHHHHTCS
T ss_pred             hcCCCCcccccccchHHHHHHHhCCCCCCCCCC--HHHHH----HHHHcCCCC---CC----CccchHHHHHHHHHHcCC
Confidence            35678999999999999999998 788875321  11111    222223222   11    333344889999999999


Q ss_pred             CCCCCCCHHHHHHHHhcccC
Q 047465           82 SADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~~~~~  101 (139)
                      +|.+||++.+++..|+++.+
T Consensus       273 ~P~~RPs~~ei~~~L~~~l~  292 (299)
T d1jpaa_         273 DRNHRPKFGQIVNTLDKMIR  292 (299)
T ss_dssp             STTTSCCHHHHHHHHHHHHH
T ss_pred             CHhHCcCHHHHHHHHHHHhc
Confidence            99999999999999987755

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=4.1e-15  Score=105.66  Aligned_cols=87  Identities=20%  Similarity=0.250  Sum_probs=61.9

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .++.++.++|||||||++|||++++.|+..... ...    +...+..+...   +.    |...+..+.+++..||+.+
T Consensus       186 ~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~-~~~----~~~~i~~~~~~---~~----~~~~~~~l~~li~~cl~~~  253 (283)
T d1mqba_         186 SYRKFTSASDVWSFGIVMWEVMTYGERPYWELS-NHE----VMKAINDGFRL---PT----PMDCPSAIYQLMMQCWQQE  253 (283)
T ss_dssp             HSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-HHH----HHHHHHTTCCC---CC----CTTCBHHHHHHHHHHTCSS
T ss_pred             ccCCCCCcccccccHHHHHHHHhCCCCccccCC-HHH----HHHHHhccCCC---CC----chhhHHHHHHHHHHHCcCC
Confidence            456789999999999999999997766532211 111    22223333332   11    3333448999999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.+++..|+.+..
T Consensus       254 p~~RPt~~eil~~L~~l~~  272 (283)
T d1mqba_         254 RARRPKFADIVSILDKLIR  272 (283)
T ss_dssp             TTTSCCHHHHHHHHHHHHH
T ss_pred             HhHCcCHHHHHHHHHHHhh
Confidence            9999999999999987665

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.52  E-value=3.6e-15  Score=106.76  Aligned_cols=84  Identities=17%  Similarity=0.125  Sum_probs=59.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCC-CCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKK-NTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++|||||||++|||+++.. |+....  ....   . ..+..+...   ++    |......+..++..||+.+
T Consensus       216 ~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~--~~e~---~-~~v~~~~~~---~~----p~~~~~~~~~li~~cl~~~  282 (301)
T d1lufa_         216 YNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA--HEEV---I-YYVRDGNIL---AC----PENCPLELYNLMRLCWSKL  282 (301)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC--HHHH---H-HHHHTTCCC---CC----CTTCCHHHHHHHHHHTCSS
T ss_pred             cCCCChhhhhccchhhHHHHHccCCCCCCCCC--HHHH---H-HHHHcCCCC---CC----CccchHHHHHHHHHHcCCC
Confidence            4568999999999999999999865 453221  1111   1 222333333   22    3333348999999999999


Q ss_pred             CCCCCCHHHHHHHHhccc
Q 047465           83 ADDRPTVYDVVSMLTNEA  100 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~  100 (139)
                      |.+||+|.+|++.|+++.
T Consensus       283 P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         283 PADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             GGGSCCHHHHHHHHHHTT
T ss_pred             hhHCcCHHHHHHHHHHhc
Confidence            999999999999998764

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=5.8e-15  Score=106.28  Aligned_cols=88  Identities=22%  Similarity=0.210  Sum_probs=62.3

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      .+.++.++||||||+++|||++++.|+..... ..   +.. ..+..+...   .  .  |......+.+++..||+.+|
T Consensus       208 ~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~-~~---~~~-~~i~~g~~~---~--~--p~~~~~~l~~li~~cl~~dP  275 (311)
T d1r0pa_         208 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-TF---DIT-VYLLQGRRL---L--Q--PEYCPDPLYEVMLKCWHPKA  275 (311)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTSCCSCC----------CH-HHHHTTCCC---C--C--CTTCCHHHHHHHHHHTCSSG
T ss_pred             cCCCCChhHhhhhHHHHHHHHHCCCCCCCCCC-HH---HHH-HHHHcCCCC---C--C--cccCcHHHHHHHHHHcCCCH
Confidence            45789999999999999999998888743211 11   111 112223322   1  1  44444589999999999999


Q ss_pred             CCCCCHHHHHHHHhcccCCC
Q 047465           84 DDRPTVYDVVSMLTNEATTL  103 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~~~~  103 (139)
                      .+||++.+|++.|+++....
T Consensus       276 ~~RPs~~ei~~~L~~i~~~~  295 (311)
T d1r0pa_         276 EMRPSFSELVSRISAIFSTF  295 (311)
T ss_dssp             GGSCCHHHHHHHHHHHHHTC
T ss_pred             hHCcCHHHHHHHHHHHHHhh
Confidence            99999999999999887643

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=5.6e-15  Score=103.78  Aligned_cols=82  Identities=30%  Similarity=0.329  Sum_probs=60.0

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||+++|||++ |+.||....  ..   . +...+..+...     ..  |...+..+.+++..||+.+
T Consensus       175 ~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~--~~---~-~~~~i~~~~~~-----~~--p~~~~~~l~~li~~cl~~d  241 (258)
T d1k2pa_         175 YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT--NS---E-TAEHIAQGLRL-----YR--PHLASEKVYTIMYSCWHEK  241 (258)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC--HH---H-HHHHHHTTCCC-----CC--CTTCCHHHHHHHHHTTCSS
T ss_pred             CCCCCcceeecccchhhHhHHhcCCCCCCCCC--HH---H-HHHHHHhCCCC-----CC--cccccHHHHHHHHHHccCC
Confidence            4568899999999999999998 787875322  11   1 22223333322     12  5555568999999999999


Q ss_pred             CCCCCCHHHHHHHHhc
Q 047465           83 ADDRPTVYDVVSMLTN   98 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~   98 (139)
                      |.+||++.+++..|.+
T Consensus       242 P~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         242 ADERPTFKILLSNILD  257 (258)
T ss_dssp             GGGSCCHHHHHHHHHC
T ss_pred             HhHCcCHHHHHHHhhC
Confidence            9999999999999865

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=4.8e-15  Score=105.11  Aligned_cols=82  Identities=27%  Similarity=0.190  Sum_probs=59.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++|||||||++|||++ |+.||....  ...    +...+..+...   +.    |...+..+.+++..||+.+
T Consensus       184 ~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~--~~~----~~~~i~~~~~~---~~----p~~~~~~~~~li~~cl~~d  250 (277)
T d1xbba_         184 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK--GSE----VTAMLEKGERM---GC----PAGCPREMYDLMNLCWTYD  250 (277)
T ss_dssp             HCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC--HHH----HHHHHHTTCCC---CC----CTTCCHHHHHHHHHHTCSS
T ss_pred             CCCCCchhhhccchhhhhHHhhCCCCCCCCCC--HHH----HHHHHHcCCCC---CC----CcccCHHHHHHHHHHcCCC
Confidence            4557889999999999999998 788885322  111    22223333333   22    3334458999999999999


Q ss_pred             CCCCCCHHHHHHHHhc
Q 047465           83 ADDRPTVYDVVSMLTN   98 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~   98 (139)
                      |.+||++.+++..|+.
T Consensus       251 p~~RPs~~~i~~~L~~  266 (277)
T d1xbba_         251 VENRPGFAAVELRLRN  266 (277)
T ss_dssp             TTTSCCHHHHHHHHHH
T ss_pred             HhHCcCHHHHHHHhhC
Confidence            9999999999888765

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=1.3e-14  Score=103.24  Aligned_cols=88  Identities=19%  Similarity=0.218  Sum_probs=61.7

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ..+.++.++||||||+++|||++++.|+..... .......    +..+...   ++    +...+..+.+++.+||+.+
T Consensus       187 ~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~-~~~~~~~----i~~~~~~---~~----~~~~~~~l~~li~~cl~~d  254 (285)
T d1fmka3         187 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-NREVLDQ----VERGYRM---PC----PPECPESLHDLMCQCWRKE  254 (285)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-HHHHHHH----HHTTCCC---CC----CTTSCHHHHHHHHHHTCSS
T ss_pred             hCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCC-HHHHHHH----HHhcCCC---CC----CcccCHHHHHHHHHHcccC
Confidence            346789999999999999999998777543221 1112222    2223222   21    3333348899999999999


Q ss_pred             CCCCCCHHHHHHHHhcccCC
Q 047465           83 ADDRPTVYDVVSMLTNEATT  102 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~~  102 (139)
                      |++||++.+|+.+|+.....
T Consensus       255 P~~Rps~~~i~~~L~~~~~~  274 (285)
T d1fmka3         255 PEERPTFEYLQAFLEDYFTS  274 (285)
T ss_dssp             GGGSCCHHHHHHHHHTTTSC
T ss_pred             HhHCcCHHHHHHHHhhhhcC
Confidence            99999999999999886653

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=4.6e-15  Score=105.63  Aligned_cols=84  Identities=21%  Similarity=0.114  Sum_probs=60.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++|||||||++|||++ |+.||....  ....    ...+..+...   +.    |...+..+.+++..||+.+
T Consensus       186 ~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~--~~~~----~~~i~~~~~~---~~----p~~~~~~l~~li~~cl~~~  252 (285)
T d1u59a_         186 FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK--GPEV----MAFIEQGKRM---EC----PPECPPELYALMSDCWIYK  252 (285)
T ss_dssp             HCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC--THHH----HHHHHTTCCC---CC----CTTCCHHHHHHHHHTTCSS
T ss_pred             CCCCCccchhhcchHHHHHHHhCCCCCCCCCC--HHHH----HHHHHcCCCC---CC----CCcCCHHHHHHHHHHcCCC
Confidence            4567899999999999999998 898886432  1121    2223334333   22    3333448999999999999


Q ss_pred             CCCCCCHHHHHHHHhccc
Q 047465           83 ADDRPTVYDVVSMLTNEA  100 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~  100 (139)
                      |.+||+|.++++.|+...
T Consensus       253 p~~RPs~~~i~~~L~~~~  270 (285)
T d1u59a_         253 WEDRPDFLTVEQRMRACY  270 (285)
T ss_dssp             GGGSCCHHHHHHHHHHHH
T ss_pred             HhHCcCHHHHHHHHHHHH
Confidence            999999999999887543

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=3.5e-15  Score=105.08  Aligned_cols=84  Identities=23%  Similarity=0.153  Sum_probs=59.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||+++|||++ |+.|+....  .......    +..+...   ++    |......+.+++.+||+.|
T Consensus       174 ~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~--~~~~~~~----i~~~~~~---~~----~~~~~~~~~~li~~cl~~d  240 (262)
T d1byga_         174 EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--LKDVVPR----VEKGYKM---DA----PDGCPPAVYEVMKNCWHLD  240 (262)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC--GGGHHHH----HTTTCCC---CC----CTTCCHHHHHHHHHHTCSS
T ss_pred             CCCCChHHHHHhHHHHHHHHHHCCCCCCCCCC--HHHHHHH----HHcCCCC---CC----CccCCHHHHHHHHHHcccC
Confidence            4678999999999999999998 555554221  2222222    2333333   22    3333348899999999999


Q ss_pred             CCCCCCHHHHHHHHhccc
Q 047465           83 ADDRPTVYDVVSMLTNEA  100 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~  100 (139)
                      |.+||++.+++.+|+++.
T Consensus       241 P~~Rps~~~l~~~L~~i~  258 (262)
T d1byga_         241 AAMRPSFLQLREQLEHIK  258 (262)
T ss_dssp             GGGSCCHHHHHHHHHHHH
T ss_pred             HhHCcCHHHHHHHHHHHH
Confidence            999999999999998754

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=9.9e-15  Score=104.37  Aligned_cols=86  Identities=17%  Similarity=0.186  Sum_probs=61.9

Q ss_pred             CCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      .++.++.++||||||+++|||++ |..|+....  .    ..+...+..+...   ..    |......+.+++.+||+.
T Consensus       210 ~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~--~----~~~~~~i~~~~~~---~~----p~~~~~~l~~li~~cl~~  276 (299)
T d1fgka_         210 FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP--V----EELFKLLKEGHRM---DK----PSNCTNELYMMMRDCWHA  276 (299)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--H----HHHHHHHHTTCCC---CC----CSSCCHHHHHHHHHHTCS
T ss_pred             cCCCCCchhhhHHhHHHHHHhccCCCCCCCCCC--H----HHHHHHHHcCCCC---CC----CccchHHHHHHHHHHccC
Confidence            34678999999999999999998 566664221  1    1222333334333   22    333344899999999999


Q ss_pred             CCCCCCCHHHHHHHHhcccC
Q 047465           82 SADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~~~~~  101 (139)
                      +|.+||++.++++.|+++..
T Consensus       277 dP~~Rps~~eil~~L~~i~a  296 (299)
T d1fgka_         277 VPSQRPTFKQLVEDLDRIVA  296 (299)
T ss_dssp             SGGGSCCHHHHHHHHHHHHH
T ss_pred             CHhHCcCHHHHHHHHHHHhh
Confidence            99999999999999988643

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=6.8e-15  Score=104.11  Aligned_cols=83  Identities=18%  Similarity=0.185  Sum_probs=58.7

Q ss_pred             CCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ..++.++||||||+++|||++ |+.||....  .   ..........+...   +.    +...+..+.+++..||+.+|
T Consensus       189 ~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~--~---~~~~~~i~~~~~~~---~~----~~~~~~~l~~li~~cl~~dp  256 (273)
T d1u46a_         189 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLN--G---SQILHKIDKEGERL---PR----PEDCPQDIYNVMVQCWAHKP  256 (273)
T ss_dssp             CEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC--H---HHHHHHHHTSCCCC---CC----CTTCCHHHHHHHHHHTCSSG
T ss_pred             CCCCcchhhhhhHHHHHHHHhCCCCCCCCcC--H---HHHHHHHHhCCCCC---CC----cccccHHHHHHHHHHcCCCh
Confidence            456789999999999999998 788875321  1   12222223333322   11    33333488999999999999


Q ss_pred             CCCCCHHHHHHHHhcc
Q 047465           84 DDRPTVYDVVSMLTNE   99 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~   99 (139)
                      .+||++.+++..|++.
T Consensus       257 ~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         257 EDRPTFVALRDFLLEA  272 (273)
T ss_dssp             GGSCCHHHHHHHHHHH
T ss_pred             hHCcCHHHHHHHHHhc
Confidence            9999999999988753

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=5.9e-15  Score=106.72  Aligned_cols=83  Identities=23%  Similarity=0.279  Sum_probs=60.0

Q ss_pred             CCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      .++.++.++|||||||++|||++ |+.||..... ...+.    ..+..+...   +.    |...+..+.+++..||+.
T Consensus       239 ~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~-~~~~~----~~~~~~~~~---~~----p~~~~~~l~~li~~cl~~  306 (325)
T d1rjba_         239 FEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV-DANFY----KLIQNGFKM---DQ----PFYATEEIYIIMQSCWAF  306 (325)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC-SHHHH----HHHHTTCCC---CC----CTTCCHHHHHHHHHHTCS
T ss_pred             cCCCCCcceeccchhHHHHHHHhCCCCCCCCCCH-HHHHH----HHHhcCCCC---CC----CCcCCHHHHHHHHHHcCC
Confidence            35678999999999999999997 7888864332 11111    222233222   11    333445899999999999


Q ss_pred             CCCCCCCHHHHHHHHh
Q 047465           82 SADDRPTVYDVVSMLT   97 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~   97 (139)
                      +|.+||++.+++..|.
T Consensus       307 dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         307 DSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             SGGGSCCHHHHHHHHH
T ss_pred             ChhHCcCHHHHHHHHh
Confidence            9999999999999985

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=9.2e-15  Score=103.29  Aligned_cols=84  Identities=25%  Similarity=0.297  Sum_probs=58.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ++.++.++|||||||++|||++++.|+..... ...    +...+..+...   .  .  |...+..+..++..||+.+|
T Consensus       184 ~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~-~~~----~~~~i~~~~~~---~--~--p~~~~~~l~~li~~cl~~~P  251 (272)
T d1qpca_         184 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT-NPE----VIQNLERGYRM---V--R--PDNCPEELYQLMRLCWKERP  251 (272)
T ss_dssp             HCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC-HHH----HHHHHHTTCCC---C--C--CTTCCHHHHHHHHHHTCSSG
T ss_pred             CCCCCchhhhhhhHHHHHHHHhCCCCCCCCCC-HHH----HHHHHHhcCCC---C--C--cccChHHHHHHHHHHcCCCH
Confidence            35688999999999999999997666532211 111    12222233322   1  1  44444589999999999999


Q ss_pred             CCCCCHHHHHHHHhcc
Q 047465           84 DDRPTVYDVVSMLTNE   99 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~   99 (139)
                      ++||++.++++.|+..
T Consensus       252 ~~Rpt~~ei~~~L~~~  267 (272)
T d1qpca_         252 EDRPTFDYLRSVLEDF  267 (272)
T ss_dssp             GGSCCHHHHHHHHHHH
T ss_pred             hHCcCHHHHHHHhhhh
Confidence            9999999999988753

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.48  E-value=1.4e-14  Score=103.19  Aligned_cols=87  Identities=18%  Similarity=0.127  Sum_probs=61.4

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .++.++.++|||||||++|||++++.|+..... ...    +...+..+...   +.    |...+..+.+++..||+.+
T Consensus       189 ~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~-~~~----~~~~i~~~~~~---~~----~~~~~~~l~~li~~cl~~d  256 (287)
T d1opja_         189 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQ----VYELLEKDYRM---ER----PEGCPEKVYELMRACWQWN  256 (287)
T ss_dssp             HHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCC-HHH----HHHHHHTTCCC---CC----CTTCCHHHHHHHHHHTCSS
T ss_pred             cCCCCCchhhhhhHHHHHHHHHhCCCCCCCcch-HHH----HHHHHhcCCCC---CC----CccchHHHHHHHHHHcCCC
Confidence            346789999999999999999998776532211 111    22223333322   11    3334458999999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.++++.|+.+..
T Consensus       257 P~~Rps~~ei~~~L~~~~~  275 (287)
T d1opja_         257 PSDRPSFAEIHQAFETMFQ  275 (287)
T ss_dssp             GGGSCCHHHHHHHHHHTTS
T ss_pred             HhHCcCHHHHHHHHHHHHH
Confidence            9999999999999987654

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=1.8e-14  Score=103.44  Aligned_cols=85  Identities=20%  Similarity=0.145  Sum_probs=60.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCC-CCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKN-TEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||+++|||++|..+ +... . ...    +...+..+...   +.    |......+.+++.+||+.+
T Consensus       200 ~~~~~~~sDvwSfGvil~ell~~~~~p~~~~-~-~~~----~~~~i~~~~~~---~~----~~~~~~~~~~li~~cl~~d  266 (309)
T d1fvra_         200 YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-T-CAE----LYEKLPQGYRL---EK----PLNCDDEVYDLMRQCWREK  266 (309)
T ss_dssp             HCEECHHHHHHHHHHHHHHHHTTSCCTTTTC-C-HHH----HHHHGGGTCCC---CC----CTTBCHHHHHHHHHHTCSS
T ss_pred             cCCCCccceeehhHHHHHHHHhcCCCCCCCC-C-HHH----HHHHHHhcCCC---CC----CccCCHHHHHHHHHHcCCC
Confidence            45678999999999999999997654 4321 1 111    22223333322   11    3333448999999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |++||++.+++..|+++..
T Consensus       267 P~~RPs~~eil~~L~~i~~  285 (309)
T d1fvra_         267 PYERPSFAQILVSLNRMLE  285 (309)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             hhHCcCHHHHHHHHHHHHh
Confidence            9999999999999988765

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=4.7e-14  Score=101.28  Aligned_cols=86  Identities=16%  Similarity=0.200  Sum_probs=59.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ++.++.++||||||+++|||++++.|+.........+..    .+..+...   ..    |......+.+++..||+.+|
T Consensus       221 ~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~----~i~~~~~~---~~----~~~~~~~l~~Li~~cl~~dP  289 (311)
T d1t46a_         221 NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK----MIKEGFRM---LS----PEHAPAEMYDIMKTCWDADP  289 (311)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHH----HHHHTCCC---CC----CTTSCHHHHHHHHHHTCSSG
T ss_pred             CCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHH----HHhcCCCC---CC----cccccHHHHHHHHHHcCCCh
Confidence            456899999999999999999966554322221222222    22223222   11    33334488999999999999


Q ss_pred             CCCCCHHHHHHHHhccc
Q 047465           84 DDRPTVYDVVSMLTNEA  100 (139)
Q Consensus        84 ~~Rps~~~v~~~L~~~~  100 (139)
                      .+||++.+++++|++..
T Consensus       290 ~~RPs~~~il~~L~~~i  306 (311)
T d1t46a_         290 LKRPTFKQIVQLIEKQI  306 (311)
T ss_dssp             GGSCCHHHHHHHHHHHH
T ss_pred             hHCcCHHHHHHHHHHhh
Confidence            99999999999998643

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=1.6e-14  Score=101.91  Aligned_cols=84  Identities=20%  Similarity=0.106  Sum_probs=59.8

Q ss_pred             CCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++|||||||++|||++ |..|+.....  .....    .+..+...   ++    |...+..+.+++..||+.+
T Consensus       183 ~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~--~~~~~----~i~~~~~~---~~----~~~~~~~~~~li~~cl~~d  249 (273)
T d1mp8a_         183 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--NDVIG----RIENGERL---PM----PPNCPPTLYSLMTKCWAYD  249 (273)
T ss_dssp             HCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHH----HHHTTCCC---CC----CTTCCHHHHHHHHHHTCSS
T ss_pred             cCCCCCccccccchHHHHHHHhcCCCCCCCCCH--HHHHH----HHHcCCCC---CC----CCCCCHHHHHHHHHHcCCC
Confidence            4578899999999999999998 7777753322  22222    12223322   11    3333348999999999999


Q ss_pred             CCCCCCHHHHHHHHhccc
Q 047465           83 ADDRPTVYDVVSMLTNEA  100 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~  100 (139)
                      |.+||++.+++..|+++.
T Consensus       250 p~~Rps~~ei~~~L~~i~  267 (273)
T d1mp8a_         250 PSRRPRFTELKAQLSTIL  267 (273)
T ss_dssp             GGGSCCHHHHHHHHHHHH
T ss_pred             HhHCcCHHHHHHHHHHHH
Confidence            999999999999988653

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=3.1e-14  Score=101.53  Aligned_cols=86  Identities=23%  Similarity=0.229  Sum_probs=60.5

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCC-CCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKK-NTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++|||||||++|||+++.. |+..... ...    ....+..+...   ..    |......+.+++..||+.+
T Consensus       210 ~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~-~~~----~~~~~~~~~~~---~~----~~~~~~~l~~li~~cl~~d  277 (299)
T d1ywna1         210 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEE----FCRRLKEGTRM---RA----PDYTTPEMYQTMLDCWHGE  277 (299)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC-SHH----HHHHHHHTCCC---CC----CTTCCHHHHHHHHHHTCSS
T ss_pred             cCCCCcccceeehHHHHHHHHhCCCCCCCCCCH-HHH----HHHHHhcCCCC---CC----CccCCHHHHHHHHHHcCCC
Confidence            4568999999999999999998754 5543222 111    12222233322   22    3333448899999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.++++.|+++.+
T Consensus       278 P~~Rpt~~eil~~L~~ilq  296 (299)
T d1ywna1         278 PSQRPTFSELVEHLGNLLQ  296 (299)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             hhHCcCHHHHHHHHHHHHh
Confidence            9999999999999987653

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=2e-14  Score=103.48  Aligned_cols=85  Identities=20%  Similarity=0.228  Sum_probs=60.4

Q ss_pred             CCCCCCccchhhhHhHHHHHHHh-CCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILS-GKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      .++.++.++||||||+++|||++ |+.|+.....  ..+..    .+..+...   ..    |......+.+++..||+.
T Consensus       186 ~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~--~~~~~----~i~~~~~~---~~----p~~~~~~~~~li~~cl~~  252 (317)
T d1xkka_         186 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISS----ILEKGERL---PQ----PPICTIDVYMIMVKCWMI  252 (317)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCG--GGHHH----HHHHTCCC---CC----CTTBCHHHHHHHHHHTCS
T ss_pred             hcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCH--HHHHH----HHHcCCCC---CC----CcccCHHHHHHHHHhCCC
Confidence            34678999999999999999998 6777653321  11222    22223222   11    444445889999999999


Q ss_pred             CCCCCCCHHHHHHHHhccc
Q 047465           82 SADDRPTVYDVVSMLTNEA  100 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~~~~  100 (139)
                      +|.+||++.+++..|+.+.
T Consensus       253 dP~~RPs~~eil~~l~~~~  271 (317)
T d1xkka_         253 DADSRPKFRELIIEFSKMA  271 (317)
T ss_dssp             SGGGSCCHHHHHHHHHHHH
T ss_pred             ChhhCcCHHHHHHHHHHHH
Confidence            9999999999999887654

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=7.8e-14  Score=100.04  Aligned_cols=85  Identities=21%  Similarity=0.231  Sum_probs=60.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCC-CCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKK-NTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      ++.++.++||||||+++|||++++. |+...     ...... ..+..+...   +.    |...+..+.+++..||+.+
T Consensus       209 ~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~-----~~~~~~-~~i~~~~~~---~~----p~~~~~~l~~li~~cl~~~  275 (308)
T d1p4oa_         209 DGVFTTYSDVWSFGVVLWEIATLAEQPYQGL-----SNEQVL-RFVMEGGLL---DK----PDNCPDMLFELMRMCWQYN  275 (308)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-----CHHHHH-HHHHTTCCC---CC----CTTCCHHHHHHHHHHTCSS
T ss_pred             cCCCCcccccccHHHHHHHHHhCCCCCCCCC-----CHHHHH-HHHHhCCCC---CC----cccchHHHHHHHHHHcCCC
Confidence            4568889999999999999999864 44321     111111 222233333   22    3333448999999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++.+++..|++..+
T Consensus       276 P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         276 PKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             GGGSCCHHHHHHHHGGGSC
T ss_pred             hhHCcCHHHHHHHHHHhcC
Confidence            9999999999999988766

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.41  E-value=2e-13  Score=96.39  Aligned_cols=88  Identities=16%  Similarity=0.133  Sum_probs=60.9

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .+..++.++||||+||+++||++|+.||.....     ..............   ....  ....+..+.+++.+|++.|
T Consensus       187 ~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-----~~~~~~~~~~~~~~---~~~~--~~~~s~~l~~li~~~L~~d  256 (277)
T d1o6ya_         187 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP-----VSVAYQHVREDPIP---PSAR--HEGLSADLDAVVLKALAKN  256 (277)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHCCCCC---GGGT--SSSCCHHHHHHHHHHTCSS
T ss_pred             cCCCCCcceecccchHHHHHHHhCCCCCCCcCH-----HHHHHHHHhcCCCC---Cchh--ccCCCHHHHHHHHHHccCC
Confidence            456789999999999999999999999863211     12222233333222   1111  1222337889999999999


Q ss_pred             CCCCC-CHHHHHHHHhccc
Q 047465           83 ADDRP-TVYDVVSMLTNEA  100 (139)
Q Consensus        83 p~~Rp-s~~~v~~~L~~~~  100 (139)
                      |.+|| ++.++.+.|.++.
T Consensus       257 p~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         257 PENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             GGGSCSSHHHHHHHHHHHH
T ss_pred             HhHCHhHHHHHHHHHHHHh
Confidence            99998 8999999887653

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.7e-13  Score=96.63  Aligned_cols=79  Identities=19%  Similarity=0.155  Sum_probs=55.5

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .+..++.++||||+||++|||++|+.||.....  ....    ..+..+...   .+    |......+.+++.+||+.|
T Consensus       187 ~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~--~~~~----~~i~~~~~~---~~----~~~~s~~l~~li~~~L~~d  253 (269)
T d2java1         187 NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--KELA----GKIREGKFR---RI----PYRYSDELNEIITRMLNLK  253 (269)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHH----HHHHHTCCC---CC----CTTSCHHHHHHHHHHTCSS
T ss_pred             cCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCH--HHHH----HHHHcCCCC---CC----CcccCHHHHHHHHHHcCCC
Confidence            456789999999999999999999999863221  1111    112222222   11    2223348899999999999


Q ss_pred             CCCCCCHHHHHH
Q 047465           83 ADDRPTVYDVVS   94 (139)
Q Consensus        83 p~~Rps~~~v~~   94 (139)
                      |.+||++.++++
T Consensus       254 p~~Rps~~ell~  265 (269)
T d2java1         254 DYHRPSVEEILE  265 (269)
T ss_dssp             GGGSCCHHHHHT
T ss_pred             hhHCcCHHHHHh
Confidence            999999999864

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=3.4e-13  Score=95.16  Aligned_cols=79  Identities=14%  Similarity=0.188  Sum_probs=54.9

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +.++.++||||+||++|||++|+.||..... .    ......+..+..+   ..+   +......+.+++.+||+.+|+
T Consensus       187 ~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~-~----~~~~~~i~~~~~~---~~~---~~~~~~~~~~li~~~l~~dp~  255 (270)
T d1t4ha_         187 EKYDESVDVYAFGMCMLEMATSEYPYSECQN-A----AQIYRRVTSGVKP---ASF---DKVAIPEVKEIIEGCIRQNKD  255 (270)
T ss_dssp             TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-H----HHHHHHHTTTCCC---GGG---GGCCCHHHHHHHHHHSCSSGG
T ss_pred             CCCCCcCchhhHHHHHHHHHHCCCCCCCccc-H----HHHHHHHHcCCCC---ccc---CccCCHHHHHHHHHHccCCHh
Confidence            4689999999999999999999999853221 1    1122223233222   111   122223788999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.++++
T Consensus       256 ~R~s~~ell~  265 (270)
T d1t4ha_         256 ERYSIKDLLN  265 (270)
T ss_dssp             GSCCHHHHHT
T ss_pred             HCcCHHHHhC
Confidence            9999999865

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=3.8e-13  Score=94.54  Aligned_cols=78  Identities=21%  Similarity=0.194  Sum_probs=55.1

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .+..++.++||||+||++|||++|+.||.....  .   . ....+.....    .+    |...+..+.+++.+||+.|
T Consensus       177 ~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--~---~-~~~~i~~~~~----~~----p~~~s~~~~~li~~~L~~d  242 (263)
T d2j4za1         177 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--Q---E-TYKRISRVEF----TF----PDFVTEGARDLISRLLKHN  242 (263)
T ss_dssp             TTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH--H---H-HHHHHHTTCC----CC----CTTSCHHHHHHHHHHTCSS
T ss_pred             cCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCH--H---H-HHHHHHcCCC----CC----CccCCHHHHHHHHHHccCC
Confidence            345688999999999999999999999853211  1   1 1111111111    11    3333448889999999999


Q ss_pred             CCCCCCHHHHHH
Q 047465           83 ADDRPTVYDVVS   94 (139)
Q Consensus        83 p~~Rps~~~v~~   94 (139)
                      |.+||++.++++
T Consensus       243 p~~R~t~~eil~  254 (263)
T d2j4za1         243 PSQRPMLREVLE  254 (263)
T ss_dssp             GGGSCCHHHHHT
T ss_pred             HhHCcCHHHHHc
Confidence            999999999975

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=1.8e-13  Score=97.94  Aligned_cols=92  Identities=14%  Similarity=-0.004  Sum_probs=55.2

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcC---------chHHHHHHHHHhhc-cchhhhhhhhccCCCCCHHHHHHHHH
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTD---------SLIFVIYYLRVANS-HIFLCLWLIINLRHGIYGRTTGHWTL   76 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-~~~~~~~~~~d~~p~~~~~~~~~l~~   76 (139)
                      ++.++|||||||++|||++|..++......         .............. +..+.++....  +......+..++.
T Consensus       195 ~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~~~l~~li~  272 (303)
T d1vjya_         195 SFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQ--SCEALRVMAKIMR  272 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGG--GCHHHHHHHHHHH
T ss_pred             cCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccccCCCCCcccC--ChHHHHHHHHHHH
Confidence            577899999999999999998765321110         00011111111111 11110001100  0111125888999


Q ss_pred             HhcccCCCCCCCHHHHHHHHhccc
Q 047465           77 LCAQESADDRPTVYDVVSMLTNEA  100 (139)
Q Consensus        77 ~C~~~~p~~Rps~~~v~~~L~~~~  100 (139)
                      +||+.||.+||++.++++.|+++.
T Consensus       273 ~cl~~dp~~Rps~~ei~~~L~~i~  296 (303)
T d1vjya_         273 ECWYANGAARLTALRIKKTLSQLS  296 (303)
T ss_dssp             TTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHcccCHhHCcCHHHHHHHHHHHH
Confidence            999999999999999999998754

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=4.7e-13  Score=95.19  Aligned_cols=80  Identities=14%  Similarity=0.255  Sum_probs=54.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      ...++.++||||+||++|||++|+.||.....  .....   .... +...   .+..  +...+..+.+++..||+.||
T Consensus       189 ~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~--~~~~~---~i~~-~~~~---~~~~--~~~~s~~~~~li~~~L~~dp  257 (288)
T d2jfla1         189 DRPYDYKADVWSLGITLIEMAEIEPPHHELNP--MRVLL---KIAK-SEPP---TLAQ--PSRWSSNFKDFLKKCLEKNV  257 (288)
T ss_dssp             TSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCG--GGHHH---HHHH-SCCC---CCSS--GGGSCHHHHHHHHHHSCSST
T ss_pred             CCCCChhhhHHHHHHHHHHHhhCCCCCCCCCH--HHHHH---HHHc-CCCC---CCCc--cccCCHHHHHHHHHHccCCh
Confidence            34578999999999999999999999864322  11111   1111 1111   1111  22233488999999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.++++
T Consensus       258 ~~R~t~~ell~  268 (288)
T d2jfla1         258 DARWTTSQLLQ  268 (288)
T ss_dssp             TTSCCHHHHTT
T ss_pred             hHCcCHHHHhc
Confidence            99999999854

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.32  E-value=1.3e-12  Score=93.65  Aligned_cols=82  Identities=11%  Similarity=0.056  Sum_probs=55.2

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .++.++.++||||+||++|||++|+.||.....  .   .............   ....  +...+..+.+++..|++.|
T Consensus       182 ~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~--~---~~~~~i~~~~~~~---~~~~--~~~~s~~~~~li~~~L~~d  251 (307)
T d1a06a_         182 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND--A---KLFEQILKAEYEF---DSPY--WDDISDSAKDFIRHLMEKD  251 (307)
T ss_dssp             TTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--H---HHHHHHHTTCCCC---CTTT--TTTSCHHHHHHHHHHSCSS
T ss_pred             cCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCH--H---HHHHHHhccCCCC---CCcc--ccCCCHHHHHHHHHHccCC
Confidence            355689999999999999999999999853211  1   1111222211111   1100  1122337899999999999


Q ss_pred             CCCCCCHHHHHH
Q 047465           83 ADDRPTVYDVVS   94 (139)
Q Consensus        83 p~~Rps~~~v~~   94 (139)
                      |.+||++.++++
T Consensus       252 P~~R~s~~eil~  263 (307)
T d1a06a_         252 PEKRFTCEQALQ  263 (307)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             HhHCcCHHHHhc
Confidence            999999999976

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.32  E-value=1.9e-12  Score=92.08  Aligned_cols=89  Identities=13%  Similarity=0.078  Sum_probs=57.3

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCch-H-HHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhccc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSL-I-FVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQE   81 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~   81 (139)
                      +..++.++||||||+++|||++|+.||........ . ........... ...   .+    ....+..+.+++..||+.
T Consensus       187 ~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~----~~~~p~~~~~li~~cl~~  258 (299)
T d1ckia_         187 GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-PIE---VL----CKGYPSEFATYLNFCRSL  258 (299)
T ss_dssp             TBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHS-CHH---HH----TTTSCHHHHHHHHHHHHS
T ss_pred             CCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCC-Chh---Hh----ccCCCHHHHHHHHHHccC
Confidence            44689999999999999999999999864332211 1 11111110100 000   11    112223788999999999


Q ss_pred             CCCCCCCHHHHHHHHhccc
Q 047465           82 SADDRPTVYDVVSMLTNEA  100 (139)
Q Consensus        82 ~p~~Rps~~~v~~~L~~~~  100 (139)
                      +|.+||++.++.+.|+...
T Consensus       259 ~p~~RP~~~~i~~~l~~~~  277 (299)
T d1ckia_         259 RFDDKPDYSYLRQLFRNLF  277 (299)
T ss_dssp             CTTCCCCHHHHHHHHHHHH
T ss_pred             ChhHCcCHHHHHHHHHHHH
Confidence            9999999999888777653

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.30  E-value=1.4e-12  Score=93.65  Aligned_cols=78  Identities=21%  Similarity=0.264  Sum_probs=54.3

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      +.|+.++||||+||++|||++|+.||.....     ......... +...   ...   +...+..+.+++..||+.||.
T Consensus       189 ~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~-----~~~~~~i~~-~~~~---~~~---~~~~s~~~~~li~~~L~~dP~  256 (309)
T d1u5ra_         189 GQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSALYHIAQ-NESP---ALQ---SGHWSEYFRNFVDSCLQKIPQ  256 (309)
T ss_dssp             CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHHHH-SCCC---CCS---CTTSCHHHHHHHHHHTCSSGG
T ss_pred             CCcCchhhhhhHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHh-CCCC---CCC---CCCCCHHHHHHHHHHCcCChh
Confidence            4688999999999999999999999853211     111112221 2211   111   222334889999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.++++
T Consensus       257 ~Rpt~~ell~  266 (309)
T d1u5ra_         257 DRPTSEVLLK  266 (309)
T ss_dssp             GSCCHHHHTT
T ss_pred             HCcCHHHHHh
Confidence            9999999875

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=1.1e-12  Score=93.51  Aligned_cols=81  Identities=16%  Similarity=0.212  Sum_probs=54.7

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .++.++.++||||+||++|||++|+.||.....  .   .........+. .   .+..  +......+.+++.+||+.|
T Consensus       189 ~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~--~---~~~~~~~~~~~-~---~~~~--~~~~s~~~~~li~~~L~~d  257 (293)
T d1yhwa1         189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP--L---RALYLIATNGT-P---ELQN--PEKLSAIFRDFLNRCLDMD  257 (293)
T ss_dssp             SSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--H---HHHHHHHHHCS-C---CCSS--GGGSCHHHHHHHHHHTCSS
T ss_pred             cCCCCCchhceehHhHHHHHHhhCCCCCCCCCH--H---HHHHHHHhCCC-C---CCCC--cccCCHHHHHHHHHHccCC
Confidence            456789999999999999999999999853221  1   11111111111 1   1111  2222337889999999999


Q ss_pred             CCCCCCHHHHHH
Q 047465           83 ADDRPTVYDVVS   94 (139)
Q Consensus        83 p~~Rps~~~v~~   94 (139)
                      |.+||++.++++
T Consensus       258 P~~R~s~~eil~  269 (293)
T d1yhwa1         258 VEKRGSAKELLQ  269 (293)
T ss_dssp             TTTSCCHHHHTT
T ss_pred             hhHCcCHHHHhc
Confidence            999999999854

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=1.6e-12  Score=92.41  Aligned_cols=82  Identities=12%  Similarity=0.025  Sum_probs=54.1

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .+..++.++||||+||++|||++|+.||....  ....   ... +....... ....   +...+..+.+++.+||+.|
T Consensus       189 ~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~--~~~~---~~~-i~~~~~~~-~~~~---~~~~s~~~~~li~~~L~~d  258 (293)
T d1jksa_         189 NYEPLGLEADMWSIGVITYILLSGASPFLGDT--KQET---LAN-VSAVNYEF-EDEY---FSNTSALAKDFIRRLLVKD  258 (293)
T ss_dssp             TTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHH---HHH-HHTTCCCC-CHHH---HTTSCHHHHHHHHTTSCSS
T ss_pred             cCCCCCCcccchhhhHHHHHHHcCCCCCCCCC--HHHH---HHH-HHhcCCCC-Cchh---cCCCCHHHHHHHHHHccCC
Confidence            34578999999999999999999999985321  1111   111 11111100 0111   1112237889999999999


Q ss_pred             CCCCCCHHHHHH
Q 047465           83 ADDRPTVYDVVS   94 (139)
Q Consensus        83 p~~Rps~~~v~~   94 (139)
                      |.+||++.+++.
T Consensus       259 P~~R~s~~eil~  270 (293)
T d1jksa_         259 PKKRMTIQDSLQ  270 (293)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhHCcCHHHHhc
Confidence            999999999875

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=2.4e-12  Score=90.76  Aligned_cols=77  Identities=13%  Similarity=0.114  Sum_probs=50.4

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDR   86 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~R   86 (139)
                      ++.++||||+||++|||++|+.||.............    .......   ..    .......+.+++.+||+.||.+|
T Consensus       183 ~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~----~~~~~~~---~~----~~~~s~~~~~li~~~L~~dP~~R  251 (271)
T d1nvra_         183 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW----KEKKTYL---NP----WKKIDSAPLALLHKILVENPSAR  251 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHH----HTTCTTS---TT----GGGSCHHHHHHHHHHSCSSTTTS
T ss_pred             CCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHH----hcCCCCC---Cc----cccCCHHHHHHHHHHcCCChhHC
Confidence            3578999999999999999999986432211111111    1111111   00    11112378889999999999999


Q ss_pred             CCHHHHHH
Q 047465           87 PTVYDVVS   94 (139)
Q Consensus        87 ps~~~v~~   94 (139)
                      |++.+++.
T Consensus       252 ~t~~eil~  259 (271)
T d1nvra_         252 ITIPDIKK  259 (271)
T ss_dssp             CCHHHHTT
T ss_pred             cCHHHHhc
Confidence            99998854

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.22  E-value=6.3e-12  Score=88.80  Aligned_cols=80  Identities=14%  Similarity=0.126  Sum_probs=53.0

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++||||+||+++||++|+.||.....  .   .............   ....  ....+..+.+++..||+.+|.
T Consensus       190 ~~~~~~~DiwslGvilyeml~g~~Pf~~~~~--~---~~~~~i~~~~~~~---~~~~--~~~~s~~~~~li~~~L~~~p~  259 (277)
T d1phka_         190 PGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ--M---LMLRMIMSGNYQF---GSPE--WDDYSDTVKDLVSRFLVVQPQ  259 (277)
T ss_dssp             CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--H---HHHHHHHHTCCCC---CTTT--GGGSCHHHHHHHHHHCCSSGG
T ss_pred             CCCCchheEcccchhhhhhccCCCCCCCCCH--H---HHHHHHHhCCCCC---CCcc--cccCCHHHHHHHHHHccCChh
Confidence            3568899999999999999999999864321  1   1111112211111   1100  112233889999999999999


Q ss_pred             CCCCHHHHHH
Q 047465           85 DRPTVYDVVS   94 (139)
Q Consensus        85 ~Rps~~~v~~   94 (139)
                      +||++.+++.
T Consensus       260 ~R~s~~eil~  269 (277)
T d1phka_         260 KRYTAEEALA  269 (277)
T ss_dssp             GSCCHHHHTT
T ss_pred             HCcCHHHHHc
Confidence            9999998854

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.21  E-value=7e-12  Score=91.36  Aligned_cols=88  Identities=17%  Similarity=0.061  Sum_probs=57.3

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .+..++.++||||+||+++||++|+.||.....  ...   ...........  +...   +......+.+++..|++.|
T Consensus       201 ~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~--~~~---~~~i~~~~~~~--~~~~---~~~~s~~~~~li~~~L~~d  270 (352)
T d1koba_         201 DREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD--LET---LQNVKRCDWEF--DEDA---FSSVSPEAKDFIKNLLQKE  270 (352)
T ss_dssp             TTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HHH---HHHHHHCCCCC--CSST---TTTSCHHHHHHHHTTSCSS
T ss_pred             cCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH--HHH---HHHHHhCCCCC--Cccc---ccCCCHHHHHHHHHHccCC
Confidence            355689999999999999999999999863221  111   11111111110  0000   1112237899999999999


Q ss_pred             CCCCCCHHHHHH--HHhccc
Q 047465           83 ADDRPTVYDVVS--MLTNEA  100 (139)
Q Consensus        83 p~~Rps~~~v~~--~L~~~~  100 (139)
                      |.+||++.+++.  ++++..
T Consensus       271 p~~R~s~~eil~Hp~~~~~~  290 (352)
T d1koba_         271 PRKRLTVHDALEHPWLKGDH  290 (352)
T ss_dssp             GGGSCCHHHHHTSTTTSSCC
T ss_pred             hhHCcCHHHHhcCHhhCCCc
Confidence            999999999986  355443

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.20  E-value=7.8e-12  Score=91.05  Aligned_cols=81  Identities=14%  Similarity=0.006  Sum_probs=53.9

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccc-hhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHI-FLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||+||++|||++|+.||....  ...   .......... ..   ...   .......+.+++.+||+.|
T Consensus       199 ~~~~~~~~DiwSlGvilyell~G~~Pf~~~~--~~~---~~~~i~~~~~~~~---~~~---~~~~s~~~~~li~~~L~~d  267 (350)
T d1koaa2         199 GKPVGYYTDMWSVGVLSYILLSGLSPFGGEN--DDE---TLRNVKSCDWNMD---DSA---FSGISEDGKDFIRKLLLAD  267 (350)
T ss_dssp             TCCBCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHH---HHHHHHHTCCCSC---CGG---GGGCCHHHHHHHHHHCCSS
T ss_pred             CCCCChhHhhhhhhHHHHHHHhCCCCCCCCC--HHH---HHHHHHhCCCCCC---ccc---ccCCCHHHHHHHHHHccCC
Confidence            4568899999999999999999999985321  111   1111111111 11   000   1111237889999999999


Q ss_pred             CCCCCCHHHHHHH
Q 047465           83 ADDRPTVYDVVSM   95 (139)
Q Consensus        83 p~~Rps~~~v~~~   95 (139)
                      |.+||++.+++..
T Consensus       268 P~~R~t~~eil~h  280 (350)
T d1koaa2         268 PNTRMTIHQALEH  280 (350)
T ss_dssp             GGGSCCHHHHHHS
T ss_pred             hhHCcCHHHHhcC
Confidence            9999999999873

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=3.7e-12  Score=90.50  Aligned_cols=77  Identities=10%  Similarity=0.096  Sum_probs=53.2

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESA   83 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p   83 (139)
                      +..++.++||||+||++|||++|+.||.....  .   ....... .+..    .+    |......+.+++.+||+.||
T Consensus       184 ~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~--~---~~~~~i~-~~~~----~~----p~~~s~~~~~li~~~L~~dP  249 (288)
T d1uu3a_         184 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNE--Y---LIFQKII-KLEY----DF----PEKFFPKARDLVEKLLVLDA  249 (288)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--H---HHHHHHH-TTCC----CC----CTTCCHHHHHHHHTTSCSSG
T ss_pred             cCCCCcccceehhhHHHHHHhhCCCCCCCcCH--H---HHHHHHH-cCCC----CC----CccCCHHHHHHHHHHccCCH
Confidence            45688999999999999999999999863211  1   1111111 1211    11    22223378899999999999


Q ss_pred             CCCCCHHHHHH
Q 047465           84 DDRPTVYDVVS   94 (139)
Q Consensus        84 ~~Rps~~~v~~   94 (139)
                      .+||++.+++.
T Consensus       250 ~~R~t~~e~~~  260 (288)
T d1uu3a_         250 TKRLGCEEMEG  260 (288)
T ss_dssp             GGSTTSGGGTC
T ss_pred             hHCcCHHHHcC
Confidence            99999998643

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.18  E-value=4.4e-11  Score=84.84  Aligned_cols=91  Identities=11%  Similarity=-0.000  Sum_probs=59.7

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCch-HHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSL-IFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||||+++|||++|+.||........ .....+..........   ++.   +.+ +..+..++..||+.+
T Consensus       187 ~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~---~l~---~~~-p~~l~~ii~~~~~~~  259 (293)
T d1csna_         187 GREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLR---ELC---AGF-PEEFYKYMHYARNLA  259 (293)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHH---HHT---TTS-CHHHHHHHHHHHHCC
T ss_pred             CCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChH---Hhc---CCC-CHHHHHHHHHHhcCC
Confidence            45688999999999999999999999964333211 1111111110001111   221   222 237889999999999


Q ss_pred             CCCCCCHHHHHHHHhcccC
Q 047465           83 ADDRPTVYDVVSMLTNEAT  101 (139)
Q Consensus        83 p~~Rps~~~v~~~L~~~~~  101 (139)
                      |.+||++..+.+.|++...
T Consensus       260 ~~~rP~y~~l~~~l~~~~~  278 (293)
T d1csna_         260 FDATPDYDYLQGLFSKVLE  278 (293)
T ss_dssp             TTCCCCHHHHHHHHHHHHH
T ss_pred             cccCcCHHHHHHHHHHHHH
Confidence            9999999998888877654

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=4e-11  Score=85.17  Aligned_cols=90  Identities=14%  Similarity=0.035  Sum_probs=54.0

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhh-------hh-c-------cCCCCC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWL-------II-N-------LRHGIY   67 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-d-------~~p~~~   67 (139)
                      .+..++.++||||+||+++||++|+.||.....  ......+...........+..       .. .       .-+...
T Consensus       188 ~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
T d1blxa_         188 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD--VDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDI  265 (305)
T ss_dssp             TTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSC
T ss_pred             cCCCCChhehhhchHHHHHHHHHCCCCCCCCCH--HHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccC
Confidence            456789999999999999999999999864321  111111111110000000000       00 0       000111


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           68 GRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        68 ~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ...+.+++.+|++.||.+||++.++++
T Consensus       266 s~~~~dli~~mL~~dP~~R~sa~e~L~  292 (305)
T d1blxa_         266 DELGKDLLLKCLTFNPAKRISAYSALS  292 (305)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            226788999999999999999999875

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=1.2e-11  Score=88.95  Aligned_cols=84  Identities=19%  Similarity=0.136  Sum_probs=55.4

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccc-hhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHI-FLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      +..++.++||||+||++|+|++|+.||....  ...   .......... ..   ....  +.+ +..+.+++..|++.|
T Consensus       177 ~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~--~~~---~~~~i~~~~~~~~---~~~~--~~~-s~~~~~li~~~L~~d  245 (321)
T d1tkia_         177 HDVVSTATDMWSLGTLVYVLLSGINPFLAET--NQQ---IIENIMNAEYTFD---EEAF--KEI-SIEAMDFVDRLLVKE  245 (321)
T ss_dssp             TCEECHHHHHHHHHHHHHHHHHSSCTTCCSS--HHH---HHHHHHHTCCCCC---HHHH--TTS-CHHHHHHHHTTSCSS
T ss_pred             CCCCCchhhcccHHHHHHHHHhCCCCCCCCC--HHH---HHHHHHhCCCCCC---hhhc--cCC-CHHHHHHHHHHccCC
Confidence            4457889999999999999999999985322  111   1111121111 11   1110  112 227889999999999


Q ss_pred             CCCCCCHHHHHH--HHhc
Q 047465           83 ADDRPTVYDVVS--MLTN   98 (139)
Q Consensus        83 p~~Rps~~~v~~--~L~~   98 (139)
                      |.+||++.+++.  ++.+
T Consensus       246 p~~R~s~~eil~hp~~~~  263 (321)
T d1tkia_         246 RKSRMTASEALQHPWLKQ  263 (321)
T ss_dssp             GGGSCCHHHHHHSHHHHS
T ss_pred             hhHCcCHHHHhcCHhhcc
Confidence            999999999986  4543

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=8.9e-11  Score=83.25  Aligned_cols=88  Identities=10%  Similarity=-0.047  Sum_probs=52.7

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhc--------cCCC--------CCH
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIIN--------LRHG--------IYG   68 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--------~~p~--------~~~   68 (139)
                      ..++.++||||+||+++||++|+.||.....  ......+...........+.....        ..+.        ...
T Consensus       176 ~~~~~~~DiwSlGvil~el~~g~~pf~~~~~--~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  253 (299)
T d1ua2a_         176 RMYGVGVDMWAVGCILAELLLRVPFLPGDSD--LDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAG  253 (299)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCC
T ss_pred             CCCChhhhhhhcchHHHHHHhCcCCCCCCCH--HHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCC
Confidence            4578999999999999999999988853221  111111211111000000000000        0000        112


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           69 RTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        69 ~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ..+.+++..|++.||++|||+.++++
T Consensus       254 ~~~~dll~~~L~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         254 DDLLDLIQGLFLFNPCARITATQALK  279 (299)
T ss_dssp             HHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhC
Confidence            27889999999999999999999975

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=6.9e-12  Score=90.80  Aligned_cols=84  Identities=13%  Similarity=0.037  Sum_probs=52.9

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCC--CCCHHHHHHHHHHhcc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRH--GIYGRTTGHWTLLCAQ   80 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p--~~~~~~~~~l~~~C~~   80 (139)
                      .+..++.++||||+||++|+|++|+.||......  ............+..    ....  +  ...+..+.+++..|++
T Consensus       186 ~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~--~~~~~~~~~i~~~~~----~~~~--~~~~~~s~~~~~li~~~L~  257 (335)
T d2ozaa1         186 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--AISPGMKTRIRMGQY----EFPN--PEWSEVSEEVKMLIRNLLK  257 (335)
T ss_dssp             CGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC----------CCCSCSS----SCCT--THHHHSCHHHHHHHHHHSC
T ss_pred             cCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHH--HHHHHHHHHHhcCCC----CCCC--cccccCCHHHHHHHHHHcc
Confidence            3456889999999999999999999998543221  111111111111111    0000  0  0112278899999999


Q ss_pred             cCCCCCCCHHHHHH
Q 047465           81 ESADDRPTVYDVVS   94 (139)
Q Consensus        81 ~~p~~Rps~~~v~~   94 (139)
                      .||.+||++.+++.
T Consensus       258 ~dP~~R~s~~eil~  271 (335)
T d2ozaa1         258 TEPTQRMTITEFMN  271 (335)
T ss_dssp             SSTTTSCCHHHHHH
T ss_pred             CChhHCcCHHHHHc
Confidence            99999999999986

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.13  E-value=1.7e-10  Score=83.83  Aligned_cols=78  Identities=18%  Similarity=0.151  Sum_probs=53.8

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .+..++.++||||+||++|||++|+.||....  .   ........ .+...    .    |......+.+++..|++.|
T Consensus       211 ~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~--~---~~~~~~i~-~~~~~----~----p~~~s~~~~~li~~~L~~d  276 (350)
T d1rdqe_         211 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ--P---IQIYEKIV-SGKVR----F----PSHFSSDLKDLLRNLLQVD  276 (350)
T ss_dssp             TTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--H---HHHHHHHH-HCCCC----C----CTTCCHHHHHHHHHHSCSC
T ss_pred             cCCCCCccccccchhHHHHHHHhCCCCCCCcC--H---HHHHHHHh-cCCCC----C----CccCCHHHHHHHHHHhhhC
Confidence            45568899999999999999999999985321  1   11111112 11111    1    3333348899999999999


Q ss_pred             CCCCC-----CHHHHHH
Q 047465           83 ADDRP-----TVYDVVS   94 (139)
Q Consensus        83 p~~Rp-----s~~~v~~   94 (139)
                      |.+|+     ++.++++
T Consensus       277 P~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         277 LTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             TTTCTTSSTTTTHHHHT
T ss_pred             HHhccccccccHHHHHc
Confidence            99994     8898875

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=3.3e-11  Score=86.59  Aligned_cols=30  Identities=27%  Similarity=0.469  Sum_probs=26.8

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCc
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEF   32 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~   32 (139)
                      .+..++.++||||+||+++||++|+.||..
T Consensus       176 ~~~~y~~~~DiWSlGvil~ell~G~~Pf~~  205 (322)
T d1s9ja_         176 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPP  205 (322)
T ss_dssp             HCSCCCTTHHHHHHHHHHHHHHHSSCCSSC
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            356789999999999999999999999854

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=2.3e-11  Score=87.44  Aligned_cols=77  Identities=16%  Similarity=0.110  Sum_probs=53.2

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .++.++.++||||+||++|||++|+.||.....  ..    +...+..+..    .+    |...+..+.+++.+||+.|
T Consensus       176 ~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~--~~----~~~~i~~~~~----~~----p~~~s~~~~dli~~~L~~d  241 (320)
T d1xjda_         176 LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--EE----LFHSIRMDNP----FY----PRWLEKEAKDLLVKLFVRE  241 (320)
T ss_dssp             TTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HH----HHHHHHHCCC----CC----CTTSCHHHHHHHHHHSCSS
T ss_pred             cCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCH--HH----HHHHHHcCCC----CC----CccCCHHHHHHHHHhcccC
Confidence            456789999999999999999999999853211  11    1111111111    11    3333448899999999999


Q ss_pred             CCCCCCHH-HHH
Q 047465           83 ADDRPTVY-DVV   93 (139)
Q Consensus        83 p~~Rps~~-~v~   93 (139)
                      |.+||++. +++
T Consensus       242 P~~R~s~~~~l~  253 (320)
T d1xjda_         242 PEKRLGVRGDIR  253 (320)
T ss_dssp             GGGSBTTBSCGG
T ss_pred             CCCCcCHHHHHH
Confidence            99999985 665

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.13  E-value=3.2e-11  Score=88.12  Aligned_cols=79  Identities=15%  Similarity=0.130  Sum_probs=53.2

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESAD   84 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~   84 (139)
                      ..++.++||||+||++|||++|+.||.........  . +........ .   ..    |......+.+++.+||+.||.
T Consensus       181 ~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~--~-~~~~~~~~~-~---~~----~~~~s~~~~~li~~~L~~dP~  249 (364)
T d1omwa3         181 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--E-IDRMTLTMA-V---EL----PDSFSPELRSLLEGLLQRDVN  249 (364)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHH--H-HHHHSSSCC-C---CC----CSSSCHHHHHHHHHHTCSSTT
T ss_pred             CCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHH--H-HHHhcccCC-C---CC----CCCCCHHHHHHHHHHcccCHH
Confidence            45889999999999999999999999643322211  1 111111111 1   11    222334789999999999999


Q ss_pred             CCCC-----HHHHHH
Q 047465           85 DRPT-----VYDVVS   94 (139)
Q Consensus        85 ~Rps-----~~~v~~   94 (139)
                      +||+     +.+++.
T Consensus       250 ~R~t~~~~~a~eil~  264 (364)
T d1omwa3         250 RRLGCLGRGAQEVKE  264 (364)
T ss_dssp             TSTTTSSSTHHHHHT
T ss_pred             HhCCCcccCHHHHHc
Confidence            9999     577764

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=2.8e-11  Score=85.05  Aligned_cols=68  Identities=19%  Similarity=0.380  Sum_probs=49.2

Q ss_pred             CCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCCC
Q 047465            7 FSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADDR   86 (139)
Q Consensus         7 ~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~R   86 (139)
                      ++.++||||+||++|||++|+.||..     ..      .........         +...+..+.+++.+||+.||.+|
T Consensus       187 ~~~~~DiwSlGvilyell~g~~Pf~~-----~~------~i~~~~~~~---------~~~~s~~~~~li~~~L~~dp~~R  246 (273)
T d1xwsa_         187 HGRSAAVWSLGILLYDMVCGDIPFEH-----DE------EIIRGQVFF---------RQRVSSECQHLIRWCLALRPSDR  246 (273)
T ss_dssp             CHHHHHHHHHHHHHHHHHHSSCSCCS-----HH------HHHHCCCCC---------SSCCCHHHHHHHHHHTCSSGGGS
T ss_pred             CCcccccccceeeehhHhhCCCCCCC-----ch------HHhhcccCC---------CCCCCHHHHHHHHHHccCCHhHC
Confidence            35678999999999999999999852     11      011111111         22223378999999999999999


Q ss_pred             CCHHHHHH
Q 047465           87 PTVYDVVS   94 (139)
Q Consensus        87 ps~~~v~~   94 (139)
                      |++.+++.
T Consensus       247 ~s~~eil~  254 (273)
T d1xwsa_         247 PTFEEIQN  254 (273)
T ss_dssp             CCHHHHHT
T ss_pred             cCHHHHhc
Confidence            99999875

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.12  E-value=6.5e-11  Score=84.93  Aligned_cols=78  Identities=17%  Similarity=0.184  Sum_probs=53.9

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .+..++.++||||+||++|||++|+.||.....     ..............         |......+.+++.+|++.+
T Consensus       174 ~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~-----~~~~~~i~~~~~~~---------p~~~s~~~~~li~~~L~~d  239 (316)
T d1fota_         174 STKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-----MKTYEKILNAELRF---------PPFFNEDVKDLLSRLITRD  239 (316)
T ss_dssp             TTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHHHCCCCC---------CTTSCHHHHHHHHHHTCSC
T ss_pred             cCCCCCchhhccccchhHHHHHhCCCCCCCcCH-----HHHHHHHHcCCCCC---------CCCCCHHHHHHHHHHhhhC
Confidence            455689999999999999999999999863211     11111222111111         2222337889999999999


Q ss_pred             CCCCC-----CHHHHHH
Q 047465           83 ADDRP-----TVYDVVS   94 (139)
Q Consensus        83 p~~Rp-----s~~~v~~   94 (139)
                      |.+|+     ++.+++.
T Consensus       240 p~~R~~~~r~t~~~il~  256 (316)
T d1fota_         240 LSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             TTTCTTSSTTTTHHHHT
T ss_pred             HHhccccchhhHHHHHc
Confidence            99996     8888875

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=1e-10  Score=84.63  Aligned_cols=78  Identities=12%  Similarity=0.078  Sum_probs=53.8

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQES   82 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~   82 (139)
                      .+..++.++|+||+||++|||++|+.||.....     ........ .+..    .+    |......+.+++..|++.|
T Consensus       178 ~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~-----~~~~~~i~-~~~~----~~----p~~~s~~~~dli~~~L~~d  243 (337)
T d1o6la_         178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----ERLFELIL-MEEI----RF----PRTLSPEAKSLLAGLLKKD  243 (337)
T ss_dssp             SSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHH-HCCC----CC----CTTSCHHHHHHHHHHTCSS
T ss_pred             cCCCCChhhcccchhhHHHHHHHCCCCCCCcCH-----HHHHHHHh-cCCC----CC----CccCCHHHHHHHHhhccCC
Confidence            456789999999999999999999999853221     11111111 1111    11    3333347889999999999


Q ss_pred             CCCCCC-----HHHHHH
Q 047465           83 ADDRPT-----VYDVVS   94 (139)
Q Consensus        83 p~~Rps-----~~~v~~   94 (139)
                      |.+|++     +.+++.
T Consensus       244 P~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         244 PKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             TTTSTTCSTTTHHHHHT
T ss_pred             chhhcccccccHHHHHc
Confidence            999995     677765

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=6.8e-11  Score=85.01  Aligned_cols=79  Identities=15%  Similarity=0.052  Sum_probs=50.9

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhccCCCCCHHHHHHHHHHhcccCCCC
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIINLRHGIYGRTTGHWTLLCAQESADD   85 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~p~~~~~~~~~l~~~C~~~~p~~   85 (139)
                      .++.++||||+||+++||++|+.||........ .......... .. .   ..    |......+.+++.+||+.||.+
T Consensus       208 ~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~-~~~i~~~~~~-~~-~---~~----~~~~s~~~~~li~~~l~~dP~~  277 (322)
T d1vzoa_         208 GHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QAEISRRILK-SE-P---PY----PQEMSALAKDLIQRLLMKDPKK  277 (322)
T ss_dssp             --CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HHHHHHHHHH-CC-C---CC----CTTSCHHHHHHHHHHTCSSGGG
T ss_pred             CCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhccc-CC-C---CC----cccCCHHHHHHHHHHcccCHHH
Confidence            467899999999999999999999854332211 1111111111 11 0   11    3333448899999999999999


Q ss_pred             CCC-----HHHHHH
Q 047465           86 RPT-----VYDVVS   94 (139)
Q Consensus        86 Rps-----~~~v~~   94 (139)
                      ||+     +.+++.
T Consensus       278 R~s~~~~t~~eil~  291 (322)
T d1vzoa_         278 RLGCGPRDADEIKE  291 (322)
T ss_dssp             STTSSTTTHHHHHT
T ss_pred             cCCCCcccHHHHHc
Confidence            995     677764

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.08  E-value=1.9e-10  Score=80.99  Aligned_cols=88  Identities=11%  Similarity=0.004  Sum_probs=52.4

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhhhc-----------------cCCCCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLIIN-----------------LRHGIY   67 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~p~~~   67 (139)
                      ..++.++||||+||+++||++|+.||.....  ......+...........+.....                 ......
T Consensus       176 ~~~~~~~DiwslGv~l~el~~G~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (286)
T d1ob3a_         176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE--ADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGL  253 (286)
T ss_dssp             CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSC
T ss_pred             CCCCcceeehhcCcHHHHHHHCCCCCCCCCH--HHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccC
Confidence            4578999999999999999999999853221  111111111111000000000000                 000111


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           68 GRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        68 ~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ...+.+++..|++.||.+||++.++++
T Consensus       254 s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         254 DESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            227789999999999999999999874

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=2.2e-10  Score=81.28  Aligned_cols=95  Identities=9%  Similarity=0.088  Sum_probs=55.2

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhcc---chhhhhhhhccCC--------------CCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSH---IFLCLWLIINLRH--------------GIY   67 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~p--------------~~~   67 (139)
                      ..++.++|+||+||++++|++|+.||.....  ......+.......   ....+....+..+              ...
T Consensus       178 ~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (298)
T d1gz8a_         178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSE--IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPL  255 (298)
T ss_dssp             SSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTC
T ss_pred             cCCCccccccccchhhhHHhhCCCCCCCCCH--HHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCC
Confidence            3467899999999999999999999863221  11111111111000   0000000000000              011


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHH--HhcccC
Q 047465           68 GRTTGHWTLLCAQESADDRPTVYDVVSM--LTNEAT  101 (139)
Q Consensus        68 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~--L~~~~~  101 (139)
                      ...+.+++.+|++.||.+||++.++++.  ++++..
T Consensus       256 s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~  291 (298)
T d1gz8a_         256 DEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK  291 (298)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCC
Confidence            1267889999999999999999999873  554433

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=1.9e-10  Score=82.12  Aligned_cols=87  Identities=8%  Similarity=-0.051  Sum_probs=50.8

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchhhhhhh--------h----ccCC--------C
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFLCLWLI--------I----NLRH--------G   65 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~----d~~p--------~   65 (139)
                      .++.++||||+||+++||++|+.||.....  ......+......-....+...        .    ..++        .
T Consensus       198 ~~~~k~DiwSlGvil~el~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (318)
T d3blha1         198 DYGPPIDLWGAGCIMAEMWTRSPIMQGNTE--QHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAY  275 (318)
T ss_dssp             SCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHH
T ss_pred             CCCcHHHcccCCceeeeHhhCCCCCCCCCH--HHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccc
Confidence            578999999999999999999999853221  1111111111100000000000        0    0000        0


Q ss_pred             CCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           66 IYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        66 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      .....+.+++.+|++.||.+||++.+++.
T Consensus       276 ~~~~~~~dLl~~mL~~dP~~R~sa~elL~  304 (318)
T d3blha1         276 VRDPYALDLIDKLLVLDPAQRIDSDDALN  304 (318)
T ss_dssp             HCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             cCCHHHHHHHHHHCcCChhHCcCHHHHHc
Confidence            00115677899999999999999999975

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=1.2e-09  Score=78.78  Aligned_cols=91  Identities=14%  Similarity=0.006  Sum_probs=55.1

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhh-----------------------ccchhhhhhhhc
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVAN-----------------------SHIFLCLWLIIN   61 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~d   61 (139)
                      ..++.++||||+||+++||++|+.|+......  ...........                       ......+..+  
T Consensus       194 ~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  269 (346)
T d1cm8a_         194 MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL--DQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASI--  269 (346)
T ss_dssp             TCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGT--
T ss_pred             CCCCccchhhcchHHHHHHHHCcCCCCCCChH--HHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHh--
Confidence            35688999999999999999999998643211  11110000000                       0000000000  


Q ss_pred             cCCCCCHHHHHHHHHHhcccCCCCCCCHHHHHHH--HhcccC
Q 047465           62 LRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSM--LTNEAT  101 (139)
Q Consensus        62 ~~p~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~~--L~~~~~  101 (139)
                        .......+.+++..|+..||.+|||+.++++.  ++.+..
T Consensus       270 --~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~~  309 (346)
T d1cm8a_         270 --LTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD  309 (346)
T ss_dssp             --CTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC-
T ss_pred             --ccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCCC
Confidence              01112377889999999999999999999873  665543

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=4e-10  Score=79.20  Aligned_cols=88  Identities=9%  Similarity=-0.007  Sum_probs=51.3

Q ss_pred             CCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccc---hhhhhhhhc--------------cCCCCCH
Q 047465            6 VFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHI---FLCLWLIIN--------------LRHGIYG   68 (139)
Q Consensus         6 ~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d--------------~~p~~~~   68 (139)
                      .++.++||||+||+++||++|+.|+..... .......+........   ........+              .......
T Consensus       178 ~~~~~~DiwSlG~il~ell~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  256 (292)
T d1unla_         178 LYSTSIDMWSAGCIFAELANAGRPLFPGND-VDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLN  256 (292)
T ss_dssp             CCCTHHHHHHHHHHHHHHTTTSCCSCCCSS-HHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCC
T ss_pred             CCCchhhccccchHHHHHhhCCCCCCCCCC-HHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCC
Confidence            468999999999999999999998632211 1111111211111100   000000000              0001112


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           69 RTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        69 ~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      ..+.+++.+|++.||.+|||+.++++
T Consensus       257 ~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         257 ATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhc
Confidence            27788999999999999999999865

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=6.4e-10  Score=80.48  Aligned_cols=90  Identities=11%  Similarity=0.052  Sum_probs=54.9

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhh-----------cc----chh-----hhhhhhccCC
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVAN-----------SH----IFL-----CLWLIINLRH   64 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~----~~~-----~~~~~~d~~p   64 (139)
                      ..++.++||||+||+++||++|+.||.....  ......+.....           ..    ...     .+.....  +
T Consensus       198 ~~~~~~~DIwSlG~il~el~~g~~pf~~~~~--~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  273 (350)
T d1q5ka_         198 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSG--VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR--P  273 (350)
T ss_dssp             SSCCTHHHHHHHHHHHHHHHHTSCSSCCSSH--HHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSC--T
T ss_pred             cCCCcceeecccceEEEehhhCCCCCCCCCH--HHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcc--c
Confidence            4688999999999999999999999854321  111111111000           00    000     0000000  1


Q ss_pred             CCCHHHHHHHHHHhcccCCCCCCCHHHHHH--HHhcc
Q 047465           65 GIYGRTTGHWTLLCAQESADDRPTVYDVVS--MLTNE   99 (139)
Q Consensus        65 ~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~--~L~~~   99 (139)
                      . ....+.+++.+|++.||.+|||+.++++  +++..
T Consensus       274 ~-~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  309 (350)
T d1q5ka_         274 R-TPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL  309 (350)
T ss_dssp             T-SCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             C-CCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccc
Confidence            1 2237889999999999999999999986  34443

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=2.3e-09  Score=77.13  Aligned_cols=94  Identities=15%  Similarity=0.032  Sum_probs=54.9

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhccchh--------hhhhhhc---cCCC--------
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSHIFL--------CLWLIIN---LRHG--------   65 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~d---~~p~--------   65 (139)
                      ..++.++||||+|+++++|++|+.||.....  ......+..........        .......   ..+.        
T Consensus       194 ~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (348)
T d2gfsa1         194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDH--IDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFI  271 (348)
T ss_dssp             SCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHST
T ss_pred             ccCCcccchhhhhHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcC
Confidence            3568899999999999999999999864321  11111111111000000        0000000   0000        


Q ss_pred             CCHHHHHHHHHHhcccCCCCCCCHHHHHH--HHhccc
Q 047465           66 IYGRTTGHWTLLCAQESADDRPTVYDVVS--MLTNEA  100 (139)
Q Consensus        66 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~--~L~~~~  100 (139)
                      .....+.+++.+|++.||.+|||+.++++  ++.+..
T Consensus       272 ~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~  308 (348)
T d2gfsa1         272 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH  308 (348)
T ss_dssp             TCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             CCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCC
Confidence            11226788999999999999999999986  455443

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=5.9e-09  Score=75.17  Aligned_cols=86  Identities=13%  Similarity=-0.014  Sum_probs=52.1

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhhcc-----------------------chhhhhhhh
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVANSH-----------------------IFLCLWLII   60 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~   60 (139)
                      ...++.++||||+|++++||++|+.||......  .............                       ....+....
T Consensus       187 ~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (345)
T d1pmea_         187 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL--DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF  264 (345)
T ss_dssp             BCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHC
T ss_pred             CCCCCchhhhhccCceehHHhhCCCCCCCCCHH--HHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhC
Confidence            345688999999999999999999998542211  1011000000000                       000000000


Q ss_pred             ccCCCCCHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 047465           61 NLRHGIYGRTTGHWTLLCAQESADDRPTVYDVVSM   95 (139)
Q Consensus        61 d~~p~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~~   95 (139)
                         +.+ ...+..++..|++.||.+||++.++++.
T Consensus       265 ---~~~-s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         265 ---PNA-DSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             ---TTS-CHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             ---CCC-CHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence               111 1267899999999999999999999863

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=3.4e-09  Score=76.71  Aligned_cols=29  Identities=28%  Similarity=0.300  Sum_probs=25.9

Q ss_pred             CCCCCCccchhhhHhHHHHHHHhCCCCCC
Q 047465            3 LEGVFSIKSDIFSLGVLMLEILSGKKNTE   31 (139)
Q Consensus         3 ~~~~~s~k~Dv~s~G~~l~ei~~~~~~~~   31 (139)
                      .+..++.++||||+||+++||++|+.||.
T Consensus       191 ~~~~~~~~~DiwSlG~~l~ell~g~~pF~  219 (355)
T d2b1pa1         191 LGMGYKENVDIWSVGCIMGEMVRHKILFP  219 (355)
T ss_dssp             TTCCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cCCCCCCCcccccccchHHHHhhCCCCCC
Confidence            45678899999999999999999999885

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=98.76  E-value=8e-09  Score=73.77  Aligned_cols=89  Identities=10%  Similarity=0.073  Sum_probs=51.9

Q ss_pred             CCCCccchhhhHhHHHHHHHhCCCCCCcCCcCchHHHHHHHHHhh------------ccchhhhhhhh------------
Q 047465            5 GVFSIKSDIFSLGVLMLEILSGKKNTEFYWTDSLIFVIYYLRVAN------------SHIFLCLWLII------------   60 (139)
Q Consensus         5 ~~~s~k~Dv~s~G~~l~ei~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~------------   60 (139)
                      ..++.++||||+|++++|+++|+.|+...... ......+.....            ......+....            
T Consensus       205 ~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~-~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (328)
T d3bqca1         205 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV  283 (328)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH-HHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGC
T ss_pred             CCCCcccchhhhhhhhHHhccCCCCCCCCchh-HHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcc
Confidence            34789999999999999999999998543221 111110100000            00000000000            


Q ss_pred             c-cCCCCCHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 047465           61 N-LRHGIYGRTTGHWTLLCAQESADDRPTVYDVVS   94 (139)
Q Consensus        61 d-~~p~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~   94 (139)
                      . .........+.+++.+|+..||.+|||+.++++
T Consensus       284 ~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         284 HSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             CTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0 000111227888999999999999999999875

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.76  E-value=1e-08  Score=73.89  Aligned_cols=29  Identities=24%  Similarity=0.370  Sum_probs=24.6

Q ss_pred             CCCCCccchhhhHhHHHHHHHhCCCCCCc
Q 047465            4 EGVFSIKSDIFSLGVLMLEILSGKKNTEF   32 (139)
Q Consensus         4 ~~~~s~k~Dv~s~G~~l~ei~~~~~~~~~   32 (139)
                      +..++.++|+||+|++++||++|+.||..
T Consensus       203 ~~~~~~~~DiwSlG~il~el~~g~~pF~~  231 (362)
T d1q8ya_         203 GAPWGCGADIWSTACLIFELITGDFLFEP  231 (362)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCCC--
T ss_pred             ccCCCccccccchHHHHHHHHHCCCCCCC
Confidence            45678999999999999999999999853