BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047471
(579 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 832 bits (2149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/578 (68%), Positives = 470/578 (81%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
+ +++SSLLHHCSKTKAL+ G+SLHAAVLK G Q DV +SNHVLN+YAKCG AR+VF
Sbjct: 2 ITETLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVF 61
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
DEM E+NLVSWSAMISG+ QAGE +A++ +SQM L+PNEY+FAS ISACA + ++ GQ
Sbjct: 62 DEMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLVPNEYVFASVISACASLSAVTLGQ 121
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+IH+ SLKFGY SISFV NSLISMYMK SDAL V+ EPN VS+NALI GFVENQ
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQ 181
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
Q E+G E FKLM +QGL+PDRF+F G L IC+ + +L++G LHC TVK L+S PF+GN
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
I+ +YS+ NLI EAEKAFRLIEEKD+ISWNT IAACSHC D+ KGL VFK M+ + VR
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVR 301
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PDDFTF S LAACAGLAS+ HGKQIHAHL+R RL QD+GVGNALVNMYAKCG I +Y +
Sbjct: 302 PDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDI 361
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F++M+H N+VSWNTIIA NH LG A++LFEQM A+GI+PDSVTFIGLLTACNHAGLV
Sbjct: 362 FSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLV 421
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+G+ YFNSME+TYGI+PDIEHF+CLID+LGRAG+L EAEEY +KFP DP+VL +LLS
Sbjct: 422 DKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLS 481
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
A RL DVVIGERLAK L LQP TTSPYVLLSNLYASDGMW VA ARK LK SGLKKE
Sbjct: 482 ASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKKE 541
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSLA 578
P +S+IEV G+ EKFT+ +F+H +I EI +LKTLS A
Sbjct: 542 PGHSLIEVNGSVEKFTIGDFTHLRIKEIKGILKTLSWA 579
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 832 bits (2149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/578 (68%), Positives = 470/578 (81%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
+ +++SSLLHHCSKTKAL+ G+SLHAAVLK G Q DV +SNHVLN+YAKCG AR+VF
Sbjct: 2 ITETLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVF 61
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
DEM E+NLVSWSAMISG+ QAGE +A++ +SQM L+PNEY+FAS ISACA + ++ GQ
Sbjct: 62 DEMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLVPNEYVFASVISACASLSAVTLGQ 121
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+IH+ SLKFGY SISFV NSLISMYMK SDAL V+ EPN VS+NALI GFVENQ
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQ 181
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
Q E+G E FKLM +QGL+PDRF+F G L IC+ + +L++G LHC TVK L+S PF+GN
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
I+ +YS+ NLI EAEKAFRLIEEKD+ISWNT IAACSHC D+ KGL VFK M+ + VR
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVR 301
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PDDFTF S LAACAGLAS+ HGKQIHAHL+R RL QD+GVGNALVNMYAKCG I +Y +
Sbjct: 302 PDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDI 361
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F++M+H N+VSWNTIIA NH LG A++LFEQM A+GI+PDSVTFIGLLTACNHAGLV
Sbjct: 362 FSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLV 421
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+G+ YFNSME+TYGI+PDIEHF+CLID+LGRAG+L EAEEY +KFP DP+VL +LLS
Sbjct: 422 DKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLS 481
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
A RL DVVIGERLAK L LQP TTSPYVLLSNLYASDGMW VA ARK LK SGLKKE
Sbjct: 482 ASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKKE 541
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSLA 578
P +S+IEV G+ EKFT+ +F+H +I EI +LKTLS A
Sbjct: 542 PGHSLIEVNGSVEKFTIGDFTHLRIKEIKGILKTLSWA 579
>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/575 (66%), Positives = 458/575 (79%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+ SL+H CSKTKAL+QG+ LHA +K + DVIVSNH+LNLYAKC K+ AR+VFDEMS
Sbjct: 6 VGSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMS 65
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHA 124
ERNLVSWSAMISG+ Q GE + AL FS+++++PNEY++AS ISACA ++ LV+G+QIH
Sbjct: 66 ERNLVSWSAMISGYEQIGEPISALGLFSKLNIVPNEYVYASVISACASLKGLVQGKQIHG 125
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+LKFG S+SFV N+LI+MYMK G SDALL Y EA E N V++NALI GFVENQQP+K
Sbjct: 126 QALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQPDK 185
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
GFEV ++M + G PDRF+F G L C+ +DL++G +LHC T+K KL S F+GN I+
Sbjct: 186 GFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIIT 245
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+YSK NL+ EAEKAFR IEEKDLISWNTFI++CSHC D+EK L FKEM N+ VRPD+F
Sbjct: 246 MYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEF 305
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
TFAS LAAC+GLAS+ +GKQIH HLIR RL QDVG GNAL+NMYAKCG I+ +Y +F++M
Sbjct: 306 TFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKM 365
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
H+N+VSWNT+IA NH GG A +LF +MK G+KPDSVTF+GLLTA NHAGLV EG
Sbjct: 366 EHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAGLVDEGL 425
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRL 484
YFNSME+TYGISP+IEHF+CLIDLLGRAG+L EA+EY KKFP G D +VLG+LLSACRL
Sbjct: 426 VYFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEAKEYMKKFPFGHDTVVLGSLLSACRL 485
Query: 485 RRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYS 544
DV G+ A+QL LQP TTSPYVLLSNLYASD MW VA A K+LK SGLKKEP +S
Sbjct: 486 HGDVDTGKCFARQLLKLQPATTSPYVLLSNLYASDEMWDGVAEAWKLLKGSGLKKEPGHS 545
Query: 545 MIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSLAA 579
+IEV GTFEKFTV +FSHS+I EI MLK L AA
Sbjct: 546 LIEVNGTFEKFTVVDFSHSRIEEIMDMLKILRWAA 580
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 179/359 (49%), Gaps = 6/359 (1%)
Query: 102 IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA 161
+ S I C+ ++L +G +HA ++K S V N ++++Y K +A V+ E
Sbjct: 5 LVGSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEM 64
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
E NLVS++A+I+G+ + +P +F + ++P+ + +A + C+ L +G
Sbjct: 65 SERNLVSWSAMISGYEQIGEPISALGLFS---KLNIVPNEYVYASVISACASLKGLVQGK 121
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
+H +K L+S FV N ++ +Y K +A A+ E + +++N I
Sbjct: 122 QIHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQ 181
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
+KG V + M D G PD FTF +L C ++ G+ +H I+++LN +G
Sbjct: 182 QPDKGFEVLRMMYQD-GFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIG 240
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-KATGI 400
N ++ MY+K L+ + K F + ++++SWNT I++ ++ AL+ F++M +
Sbjct: 241 NLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRV 300
Query: 401 KPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+PD TF L AC+ + G+ + +T + D+ LI++ + G + +A
Sbjct: 301 RPDEFTFASALAACSGLASMCNGKQIHGHLIRTR-LYQDVGAGNALINMYAKCGCIAKA 358
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S L CS ++ G +H +++ + DV N ++N+YAKCG + A +F +M
Sbjct: 306 TFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKM 365
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISA 109
+NLVSW+ MI+G G A E F++M + P+ F ++A
Sbjct: 366 EHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTA 414
>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 589
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/576 (65%), Positives = 452/576 (78%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
+ ++I SLLHHC+K KA G+SLHAA LK G+ D+IVSNHV+NLY+KCG +I AR++F
Sbjct: 2 IPEAIGSLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMF 61
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
DEMS+RNLVSWSA+ISG+ Q G+ LLAL FSQM ++PNEY+FAS ISACA + +L +G
Sbjct: 62 DEMSDRNLVSWSAIISGYDQTGQPLLALNLFSQMRIVPNEYVFASVISACASLTALSQGL 121
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HA SLK G S+SFV N+LISMYMK G +DALLV+ EPN VS+NALIAGFVENQ
Sbjct: 122 QVHAQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQ 181
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
QPEKG E FK+M ++G PDRF+F+G L IC+ +D +GM LHC +K LE + F+GN
Sbjct: 182 QPEKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGN 241
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
I+ +YSKFNLI EAEK F LI+EKDLISWNT + AC C D+E+ L VF++M + V+
Sbjct: 242 VIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVK 301
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PDDFTFA +LAACAGLAS++HGKQIH HLIR R QDVGV NALVNMYAKCG I SY +
Sbjct: 302 PDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDV 361
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F RN+VSWNTIIAA NH LG AL+ FE+MK GI PDSVTF+GLLTACNHAGLV
Sbjct: 362 FRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLV 421
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+EG+ YFNSME+ YGI P+IEHF+CLIDLLGRAG+L EAEEY +K P G DPI+LG+LLS
Sbjct: 422 EEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGSLLS 481
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACRL D+VIGE LA QL LQP TTSPYVLLSNLYASD MWG VA A KMLK SGLKKE
Sbjct: 482 ACRLHGDMVIGEHLATQLLKLQPVTTSPYVLLSNLYASDEMWGGVAEAWKMLKYSGLKKE 541
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
P +S+I+V G FEKFT+ + SHS+I EI +K L+
Sbjct: 542 PGHSLIDVMGMFEKFTMGDLSHSRIEEIKDTIKMLN 577
>gi|147844170|emb|CAN80560.1| hypothetical protein VITISV_031385 [Vitis vinifera]
Length = 730
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/571 (62%), Positives = 421/571 (73%), Gaps = 39/571 (6%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
L + C AL+ G+SLHAAVLK G Q DV +SNHVLN+YAKCG AR+VFDEM E+N
Sbjct: 16 LCYGCDIVNALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKN 75
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSL 127
LVSWSAMISG+ QAGE +A++ +SQM L+PNEY+FAS ISACA + +L +GQ+IH+ SL
Sbjct: 76 LVSWSAMISGYDQAGEPQMAIDLYSQMFLVPNEYVFASVISACASLSALTQGQKIHSRSL 135
Query: 128 KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE 187
KFGY SISFV NSLISMYMK SDAL V+ EPN VS+NALI GFVENQQ E+GFE
Sbjct: 136 KFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGFE 195
Query: 188 VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYS 247
FKLM +QGL+PDRF+F G L IC+ + +L++G LHC TVK L+S PF+GN I+ +YS
Sbjct: 196 FFKLMXQQGLIPDRFAFMGVLGICTTTENLKRGTELHCQTVKLNLDSTPFIGNVIITMYS 255
Query: 248 KFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFA 307
+ NLI EAEKAFRLIEEKD+ISWNT IAACSHC D+ KGL VFK M+ + VRPDDFTF
Sbjct: 256 ELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFT 315
Query: 308 SILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR 367
S LAACAGLAS+ HGKQIHAHL+R L +D+GV NALVNMYAKCG I +Y +F++M+H
Sbjct: 316 SALAACAGLASMSHGKQIHAHLMRTSLYRDLGVDNALVNMYAKCGCIGYAYDIFSKMVHH 375
Query: 368 NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYF 427
N+VSWNTIIA NH LG A++LFEQM A GI+PDSVTFIGLLTACNHAGL
Sbjct: 376 NLVSWNTIIAGFGNHGLGERAVELFEQMNAIGIRPDSVTFIGLLTACNHAGL-------- 427
Query: 428 NSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRD 487
AEEY +KFP DP+VL +LLSA RL D
Sbjct: 428 -------------------------------AEEYMRKFPFWNDPVVLVSLLSASRLHGD 456
Query: 488 VVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIE 547
VVIGERLAK L LQP TTSPYVLLSNLYASDGMW VA ARK LK SGLKKEP +S+IE
Sbjct: 457 VVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKKEPGHSLIE 516
Query: 548 VQGTFEKFTVAEFSHSKIGEINYMLKTLSLA 578
V G+ EKFT+ +F+H +I EI +LKTLS A
Sbjct: 517 VNGSVEKFTIGDFTHLRIKEIKGILKTLSWA 547
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 195/399 (48%), Gaps = 17/399 (4%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+S++ C+ AL QG +H+ LK G + VSN ++++Y KC + A VF E
Sbjct: 112 ASVISACASLSALTQGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPE 171
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFS---QMHLLPNEYIFASAISACAGIQSLVKGQQI 122
N VS++A+I+G + + EFF Q L+P+ + F + C ++L +G ++
Sbjct: 172 PNCVSYNALITGFVENQQLERGFEFFKLMXQQGLIPDRFAFMGVLGICTTTENLKRGTEL 231
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H ++K S F+GN +I+MY ++ +A + E +++S+N LIA
Sbjct: 232 HCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDH 291
Query: 183 EKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
KG VFK M + + PD F+F L C+ + G +H ++ L + V N
Sbjct: 292 AKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTSLYRDLGVDNA 351
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y+K IG A F + +L+SWNT IA + E+ + +F++M N G+RP
Sbjct: 352 LVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQM-NAIGIRP 410
Query: 302 DDFTFASILAAC--AGLASVQHGK--------QIHAHLIRMRLNQDVGVGNALVNMYAKC 351
D TF +L AC AGLA K + + L RL+ DV +G L K
Sbjct: 411 DSVTFIGLLTACNHAGLAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLAKWLLKL 470
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALK 390
++ S + L+ + W+++ A A RL GS LK
Sbjct: 471 QPVTTSPYVLLSNLYASDGMWDSV--AEARKRLKGSGLK 507
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 7/112 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S L C+ ++ G +HA +++ + D+ V N ++N+YAKCG + A +F +M
Sbjct: 313 TFTSALAACAGLASMSHGKQIHAHLMRTSLYRDLGVDNALVNMYAKCGCIGYAYDIFSKM 372
Query: 64 SERNLVSWSAMIS--GHHQAGEHLLALEFFSQMHLL---PNEYIFASAISAC 110
NLVSW+ +I+ G+H GE A+E F QM+ + P+ F ++AC
Sbjct: 373 VHHNLVSWNTIIAGFGNHGLGER--AVELFEQMNAIGIRPDSVTFIGLLTAC 422
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/575 (37%), Positives = 353/575 (61%), Gaps = 4/575 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++S++L C+ + L+ G +H+ +++G + D +S ++++Y+KCG A KVF +
Sbjct: 332 TLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRI 391
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+ ++VSWSA+I+ Q G+ A E F +M ++PN++ AS +SA + L G+
Sbjct: 392 EDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGE 451
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IHA K+G+ + V N+L++MYMK+G D V+ +L+S+NAL++GF +N+
Sbjct: 452 SIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNE 511
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ G +F ML +G P+ ++F L CS +D+ G +H VK L+ N FVG
Sbjct: 512 TCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGT 571
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y+K + +AE F + ++DL +W +A + EK + F +M + GV+
Sbjct: 572 ALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQRE-GVK 630
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P++FT AS L+ C+ +A++ G+Q+H+ I+ + D+ V +ALV+MYAKCG + + +
Sbjct: 631 PNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVV 690
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+ ++ R+ VSWNTII ++ H GG ALK FE M G PD VTFIG+L+AC+H GL+
Sbjct: 691 FDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLI 750
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+EG+ +FNS+ K YGI+P IEH+ C++D+LGRAGK E E + ++ L + ++ T+L
Sbjct: 751 EEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLG 810
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC++ ++ GER A +LF L+P S Y+LLSN++A+ GMW DV R ++ G+KKE
Sbjct: 811 ACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKE 870
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P S +EV G F + SH KI EI+ L+ L
Sbjct: 871 PGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDL 905
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/460 (30%), Positives = 249/460 (54%), Gaps = 5/460 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++ L CS L+ G +HA +K+G D+ V + +++LYAKCG+M+LA +VF M
Sbjct: 231 TYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCM 290
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
++N VSW+A+++G Q G+ L F +M + +++ ++ + CA +L GQ
Sbjct: 291 PKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQ 350
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H+ +++ G F+ L+ MY K G + DAL V+ +P++VS++A+I +
Sbjct: 351 IVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKG 410
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
Q + EVFK M G++P++F+ A + + DL G +H K E + V N
Sbjct: 411 QSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCN 470
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y K + + + F +DLISWN ++ + GL +F +M + G
Sbjct: 471 ALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAE-GFN 529
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P+ +TF SIL +C+ L+ V GKQ+HA +++ L+ + VG ALV+MYAK + + +
Sbjct: 530 PNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETI 589
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN ++ R++ +W I+A +A G A+K F QM+ G+KP+ T L+ C+ +
Sbjct: 590 FNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATL 649
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
G +SM G S D+ + L+D+ + G + +AE
Sbjct: 650 DSGRQ-LHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAE 688
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 153/463 (33%), Positives = 248/463 (53%), Gaps = 9/463 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+ S +L C+ L +G ++H V+K GI PD + N ++N+YAKCG A KVF E
Sbjct: 129 RQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGE 188
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
+ ER++VSW+A+I+G G A+ F +M + NE+ +A+A+ AC+ L G
Sbjct: 189 IPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFG 248
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+HA ++K G S FVG++L+ +Y K G A V+ + N VS+NAL+ GF +
Sbjct: 249 KQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQM 308
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
EK +F M + +F+ + L+ C+ S +LR G I+H L ++ E + F+
Sbjct: 309 GDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFIS 368
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ +YSK L G+A K F IE+ D++SW+ I + VFK M + GV
Sbjct: 369 CCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHS-GV 427
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
P+ FT AS+++A L + +G+ IHA + + D V NALV MY K G + +
Sbjct: 428 IPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCR 487
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F +R+++SWN +++ ++ + L++F QM A G P+ TFI +L +C+
Sbjct: 488 VFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSD 547
Query: 420 VKEGEAYFNSMEKTYGISPDIEHF--TCLIDLLGRAGKLLEAE 460
V G+ + K S D F T L+D+ + L +AE
Sbjct: 548 VDLGKQVHAQIVKN---SLDGNDFVGTALVDMYAKNRFLEDAE 587
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/572 (38%), Positives = 329/572 (57%), Gaps = 4/572 (0%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S++ C LQ G +H ++ G + DVIV + ++Y KCG + AR+VFD M +R
Sbjct: 125 SVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKR 184
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
++VSW+A+I+G+ Q G+ AL FS+M + PN S + CA + +L +G+QIH
Sbjct: 185 DVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIH 244
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
Y+++ G S V N L++MY K G + A ++ ++ S+NA+I G+ N Q
Sbjct: 245 CYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHH 304
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ F M +G+ P+ + L C+ L +G +H ++ ESN VGN ++
Sbjct: 305 EALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALV 364
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K + A K F + +K++++WN I+ S + L++F EM G++PD
Sbjct: 365 NMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQ-AQGIKPDS 423
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
F S+L ACA +++ GKQIH + IR +V VG LV++YAKCG ++ + KLF
Sbjct: 424 FAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFER 483
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M ++VVSW T+I A+ H G AL LF +M+ TG K D + F +LTAC+HAGLV +G
Sbjct: 484 MPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQG 543
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
YF M+ YG++P +EH+ CL+DLLGRAG L EA K L D V G LL ACR
Sbjct: 544 LQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACR 603
Query: 484 LRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSY 543
+ ++ +GE+ AK LF L P YVLLSN+YA W DVA RKM+K+ G+KK+P
Sbjct: 604 IHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGC 663
Query: 544 SMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S++ V + F V + +H + +I ML+ L
Sbjct: 664 SVVAVHRDVQTFLVGDRTHPQSEQIYAMLEIL 695
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 137/418 (32%), Positives = 226/418 (54%), Gaps = 6/418 (1%)
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
N V W I G+ + G AL + QM + P++ +F S I AC L G+++H
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ G+ S VG +L SMY K G +A V+ + ++VS+NA+IAG+ +N QP
Sbjct: 144 EDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPY 203
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ +F M G+ P+ + + +C+ L +G +HC ++ +ES+ V N ++
Sbjct: 204 EALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLV 263
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K + A K F + +D+ SWN I S + + + L+ F M G++P+
Sbjct: 264 NMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQ-VRGIKPNS 322
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T S+L ACA L +++ G+QIH + IR + VGNALVNMYAKCG ++ +YKLF
Sbjct: 323 ITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFER 382
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M +NVV+WN II+ ++ H AL LF +M+A GIKPDS + +L AC H +++G
Sbjct: 383 MPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQG 442
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+ ++ G ++ T L+D+ + G + A++ ++ P QD + T++ A
Sbjct: 443 KQIHGYTIRS-GFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP-EQDVVSWTTMILA 498
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 137/449 (30%), Positives = 229/449 (51%), Gaps = 26/449 (5%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ ++ S++ C+ AL+QG +H ++ GI+ DV+V N ++N+YAKCG + A K+F+
Sbjct: 221 SSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFE 280
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
M R++ SW+A+I G+ +H AL FF++M + PN S + ACA + +L +
Sbjct: 281 RMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQ 340
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
GQQIH Y+++ G+ S VGN+L++MY K G + A ++ + N+V++NA+I+G+ +
Sbjct: 341 GQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQ 400
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ P + +F M QG+ PD F+ L C+ L +G +H T++ ESN V
Sbjct: 401 HGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVV 460
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
G ++ +Y+K + A+K F + E+D++SW T I A E L++F +M + G
Sbjct: 461 GTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQ-ETG 519
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN------ALVNMYAKCG 352
+ D F +IL AC+ V G Q + D G+ LV++ + G
Sbjct: 520 TKLDHIAFTAILTACSHAGLVDQGLQYF-----QCMKSDYGLAPKLEHYACLVDLLGRAG 574
Query: 353 LISCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSALK-LFEQMKATGIKPDSVTF 407
+ + + M L + W ++ A H N LG A K LFE + PD+ +
Sbjct: 575 HLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFE------LDPDNAGY 628
Query: 408 IGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
LL+ E A M K G+
Sbjct: 629 YVLLSNIYAEAQRWEDVAKLRKMMKEKGV 657
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+ N V W I + + AL+L+ QM+ TGI PD + F+ ++ AC ++ G
Sbjct: 81 IRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGR 140
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+ G D+ T L + + G L A + + P
Sbjct: 141 KVHEDI-IARGFESDVIVGTALASMYTKCGSLENARQVFDRMP 182
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/576 (35%), Positives = 345/576 (59%), Gaps = 4/576 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++++L C+ +K L+QG +H+ ++K G + + + ++++Y+KCG I A VF +
Sbjct: 316 TLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTI 375
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+ ++V WSA+I+ Q G+ +++ F M L LPN+Y S +SA +L GQ
Sbjct: 376 KKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQ 435
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IHA K+G+ + V N+L++MYMK G D +Y + +L+S+NA ++G +
Sbjct: 436 SIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCG 495
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
++ +F ML +G +P+ ++F L CS D+ G +H +K +L+ N FV
Sbjct: 496 MYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCT 555
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y+K + +A+ AF + +DL +W I + EK L+ F++M + GV+
Sbjct: 556 ALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQE-GVK 614
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P++FT A L+ C+ LAS++ G+Q+H+ + + D+ VG+ALV+MYAKCG + + L
Sbjct: 615 PNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEAL 674
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F ++ R+ ++WNTII +A + G AL F M GI PD VTF G+L+AC+H GLV
Sbjct: 675 FEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLV 734
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+EG+ +FNSM + +GISP ++H C++D+LGR GK E E++ +K L Q+ ++ T+L
Sbjct: 735 EEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLG 794
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
A ++ ++V+GE+ A +LF LQP S Y+LLSN++A++G W DV R ++ G+KKE
Sbjct: 795 ASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKE 854
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
P S +E G F ++SH +I EI+ L L
Sbjct: 855 PGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELD 890
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 150/479 (31%), Positives = 263/479 (54%), Gaps = 6/479 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++++ L CS AL G +HA K+G+ D+ V + +++LYAKCG++ LA K+F M
Sbjct: 215 TLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGM 274
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQ 120
E+N V+W+ +++G+ Q G+ L+ F M L NE+ + + CA ++L +GQ
Sbjct: 275 PEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQ 334
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IH+ +K GY F+G L+ MY K G + DA+ V+ +P++V ++ALI +
Sbjct: 335 VIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQG 394
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
Q E+ ++F LM LP++++ L + + +L+ G +H K E++ V N
Sbjct: 395 QSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSN 454
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y K + + K + + ++DLISWN +++ C Y++ L++F M + G
Sbjct: 455 ALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHML-EEGFI 513
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P+ +TF SIL +C+ L V +G+Q+HAH+I+ +L+ + V AL++MYAKC + +
Sbjct: 514 PNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVA 573
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN + R++ +W II +A G AL F QM+ G+KP+ T G L+ C+ +
Sbjct: 574 FNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASL 633
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
EG +SM G D+ + L+D+ + G + EAE + + +D I T++
Sbjct: 634 -EGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTII 690
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 135/463 (29%), Positives = 237/463 (51%), Gaps = 9/463 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
K SS+L C+ ++L ++H ++K I PD + ++N+YAKC AR V +
Sbjct: 113 KYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAK 172
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
M +R++VSW+A+I G G ++ F +M ++PNE+ A+ + AC+ +L G
Sbjct: 173 MPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLG 232
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+HA + K G FVG++L+ +Y K G A ++ E N V++N L+ G+ +
Sbjct: 233 KQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQR 292
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
++F M+ + + F+ L+ C+ S +L++G ++H L +KC E N F+G
Sbjct: 293 GDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIG 352
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ +YSK L +A F+ I++ D++ W+ I E+ + +F M +
Sbjct: 353 CGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTL 412
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
P+ +T S+L+A ++Q+G+ IHA + + DV V NALV MY K G + K
Sbjct: 413 -PNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTK 471
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
L+ M+ R+++SWN ++ + + L +F M G P+ TFI +L +C+
Sbjct: 472 LYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFD 531
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTC--LIDLLGRAGKLLEAE 460
V G + K D +F C LID+ + L +A+
Sbjct: 532 VHYGRQVHAHIIKN---QLDDNNFVCTALIDMYAKCMYLEDAD 571
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/576 (35%), Positives = 345/576 (59%), Gaps = 4/576 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++++L C+ +K L+QG +H+ ++K G + + + ++++Y+KCG I A VF +
Sbjct: 316 TLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTI 375
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+ ++V WSA+I+ Q G+ +++ F M L LPN+Y S +SA +L GQ
Sbjct: 376 KKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQ 435
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IHA K+G+ + V N+L++MYMK G D +Y + +L+S+NA ++G +
Sbjct: 436 SIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCG 495
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
++ +F ML +G +P+ ++F L CS D+ G +H +K +L+ N FV
Sbjct: 496 MYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCT 555
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y+K + +A+ AF + +DL +W I + EK L+ F++M + GV+
Sbjct: 556 ALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQE-GVK 614
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P++FT A L+ C+ LAS++ G+Q+H+ + + D+ VG+ALV+MYAKCG + + L
Sbjct: 615 PNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEAL 674
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F ++ R+ ++WNTII +A + G AL F M GI PD VTF G+L+AC+H GLV
Sbjct: 675 FEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLV 734
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+EG+ +FNSM + +GISP ++H C++D+LGR GK E E++ +K L Q+ ++ T+L
Sbjct: 735 EEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLG 794
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
A ++ ++V+GE+ A +LF LQP S Y+LLSN++A++G W DV R ++ G+KKE
Sbjct: 795 ASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKE 854
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
P S +E G F ++SH +I EI+ L L
Sbjct: 855 PGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELD 890
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 150/479 (31%), Positives = 263/479 (54%), Gaps = 6/479 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++++ L CS AL G +HA K+G+ D+ V + +++LYAKCG++ LA K+F M
Sbjct: 215 TLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGM 274
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQ 120
E+N V+W+ +++G+ Q G+ L+ F M L NE+ + + CA ++L +GQ
Sbjct: 275 PEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQ 334
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IH+ +K GY F+G L+ MY K G + DA+ V+ +P++V ++ALI +
Sbjct: 335 VIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQG 394
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
Q E+ ++F LM LP++++ L + + +L+ G +H K E++ V N
Sbjct: 395 QSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSN 454
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y K + + K + + ++DLISWN +++ C Y++ L++F M + G
Sbjct: 455 ALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHML-EEGFI 513
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P+ +TF SIL +C+ L V +G+Q+HAH+I+ +L+ + V AL++MYAKC + +
Sbjct: 514 PNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVA 573
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN + R++ +W II +A G AL F QM+ G+KP+ T G L+ C+ +
Sbjct: 574 FNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASL 633
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
EG +SM G D+ + L+D+ + G + EAE + + +D I T++
Sbjct: 634 -EGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTII 690
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 135/463 (29%), Positives = 237/463 (51%), Gaps = 9/463 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
K SS+L C+ ++L ++H ++K I PD + ++N+YAKC AR V +
Sbjct: 113 KYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAK 172
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
M +R++VSW+A+I G G ++ F +M ++PNE+ A+ + AC+ +L G
Sbjct: 173 MPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLG 232
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+HA + K G FVG++L+ +Y K G A ++ E N V++N L+ G+ +
Sbjct: 233 KQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQR 292
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
++F M+ + + F+ L+ C+ S +L++G ++H L +KC E N F+G
Sbjct: 293 GDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIG 352
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ +YSK L +A F+ I++ D++ W+ I E+ + +F M +
Sbjct: 353 CGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTL 412
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
P+ +T S+L+A ++Q+G+ IHA + + DV V NALV MY K G + K
Sbjct: 413 -PNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTK 471
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
L+ M+ R+++SWN ++ + + L +F M G P+ TFI +L +C+
Sbjct: 472 LYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFD 531
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTC--LIDLLGRAGKLLEAE 460
V G + K D +F C LID+ + L +A+
Sbjct: 532 VHYGRQVHAHIIKN---QLDDNNFVCTALIDMYAKCMYLEDAD 571
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/575 (37%), Positives = 340/575 (59%), Gaps = 4/575 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++S++L C+ T +L++G LHA L+ G + D + ++++Y+KCG + A KVF ++
Sbjct: 53 TLSTVLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKI 112
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
++V+WSAMI+G Q G A E F M PN++ +S +S + L GQ
Sbjct: 113 RNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQ 172
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IH K+G+ S + V N LI MYMK D V+ P+LVS+NAL++GF ++Q
Sbjct: 173 SIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQ 232
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+G +F ML +G P+ F+F L CS D G +H +K + + FVG
Sbjct: 233 TCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGT 292
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y+K + +A AF + +D+ SW I+ + EK + F++M + G++
Sbjct: 293 ALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQRE-GIK 351
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P+++T AS L+ C+ +A++++G+Q+HA ++ D+ VG+ALV++Y KCG + + +
Sbjct: 352 PNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAI 411
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F ++ R++VSWNTII+ ++ H G AL+ F M + GI PD TFIG+L+AC+ GLV
Sbjct: 412 FKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLV 471
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+EG+ F+SM K YGI+P IEH+ C++D+LGRAGK E + + ++ L ++ T+L
Sbjct: 472 EEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLG 531
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC+L +V GE+ AK+LF ++P S Y+LLSN++AS G W DV R ++ G+KKE
Sbjct: 532 ACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKE 591
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P S +EV G F + SH KI EI L L
Sbjct: 592 PGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKL 626
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 134/432 (31%), Positives = 232/432 (53%), Gaps = 6/432 (1%)
Query: 53 MILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISA 109
M LA ++F M E+N VSW+A+++G+ Q G+ L+ F +M +++ ++ +
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 110 CAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSF 169
CA SL +G+ +HA +L+ G F+G SL+ MY K G DAL V+ + P++V++
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 170 NALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK 229
+A+I G + ++ E+F LM R+G P++F+ + + + DLR G +H K
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180
Query: 230 CKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSV 289
ES+ V N ++ +Y K + + K F + DL+SWN ++ +G +
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRI 240
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
F +M + G +P+ FTF S+L +C+ L + GKQ+HAH+I+ + D VG ALV+MYA
Sbjct: 241 FYQMLLE-GFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYA 299
Query: 350 KCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
K + + F+ +++R++ SW II+ +A A+K F QM+ GIKP+ T
Sbjct: 300 KARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLAS 359
Query: 410 LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLG 469
L+ C+H ++ G +++ G DI + L+DL G+ G + AE K +
Sbjct: 360 CLSGCSHMATLENGRQ-LHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGL-IS 417
Query: 470 QDPIVLGTLLSA 481
+D + T++S
Sbjct: 418 RDIVSWNTIISG 429
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/576 (37%), Positives = 344/576 (59%), Gaps = 5/576 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++ ++ +KTK L++G LHA ++ G P ++NH++N+Y+KCG++ A K+FD M
Sbjct: 7 ALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTM 66
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+RNLVSW+AMISG Q + A+ F M + +P ++ F+SAI ACA + S+ G+
Sbjct: 67 PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGK 126
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H +LKFG S FVG++L MY K G DA V+ E + VS+ A+I G+ +
Sbjct: 127 QMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIG 186
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ E+ FK M+ + + D+ L C + G +H VK ES+ FVGN
Sbjct: 187 EFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGN 246
Query: 241 TIMALYSKFNLIGEAEKAFRLIEE-KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+ +YSK + A F + E ++++S+ I EKGLSVF E+ G+
Sbjct: 247 ALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRR-QGI 305
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
P++FTF+S++ ACA A+++ G Q+HA ++++ ++D V + LV+MY KCGL+ + +
Sbjct: 306 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 365
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
F+E+ ++WN++++ H LG A+K+FE+M G+KP+++TFI LLT C+HAGL
Sbjct: 366 AFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGL 425
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V+EG YF SM+KTYG+ P EH++C+IDLLGRAG+L EA+E+ + P + + L
Sbjct: 426 VEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 485
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
ACR+ D +G+ A++L L+P + VLLSN+YA++ W DV R ++D +KK
Sbjct: 486 GACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKK 545
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P YS ++V F ++SH + I L TL
Sbjct: 546 LPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTL 581
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 187/366 (51%), Gaps = 5/366 (1%)
Query: 96 LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL 155
+L + A I A + L +G+Q+HA + GY +F+ N L++MY K G AL
Sbjct: 1 MLRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHAL 60
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN 215
++ + NLVS+ A+I+G +N + + F M G +P +F+F+ + C+
Sbjct: 61 KLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLG 120
Query: 216 DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIA 275
+ G +HCL +K + S FVG+ + +YSK + +A K F + KD +SW I
Sbjct: 121 SIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMID 180
Query: 276 ACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN 335
S ++E+ L FK+M D V D S L AC L + + G+ +H+ ++++
Sbjct: 181 GYSKIGEFEEALLAFKKMI-DEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFE 239
Query: 336 QDVGVGNALVNMYAKCGLISCSYKLFN-EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQ 394
D+ VGNAL +MY+K G + + +F + RNVVS+ +I + L +F +
Sbjct: 240 SDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVE 299
Query: 395 MKATGIKPDSVTFIGLLTAC-NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 453
++ GI+P+ TF L+ AC N A L + + + M+ + P + + L+D+ G+
Sbjct: 300 LRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKC 357
Query: 454 GKLLEA 459
G L +A
Sbjct: 358 GLLEQA 363
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/562 (38%), Positives = 326/562 (58%), Gaps = 4/562 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ISSLL C+ LQ+G LH+ + K GI D I+ +L+LY KCG + A +F+
Sbjct: 246 TISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSS 305
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
N+V W+ M+ Q + + E F QM + PN++ + + C + + G+
Sbjct: 306 DRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGE 365
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH+ S+K G+ S +V LI MY K G+ A V E ++VS+ ++IAG+V+++
Sbjct: 366 QIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHE 425
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ FK M + G+ PD A + C+ N +R+G+ +H + + N
Sbjct: 426 CCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWN 485
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ LY++ I EA +F IE KD I+WN ++ + +E+ L VF M + GV+
Sbjct: 486 ALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRM-DQSGVK 544
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ FTF S L+A A LA ++ GKQIHA +I+ + + VGNAL+++Y KCG +
Sbjct: 545 HNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKME 604
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+EM RN VSWNTII + + H G AL LF+QMK GIKP+ VTFIG+L AC+H GLV
Sbjct: 605 FSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLV 664
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+EG +YF SM YGI P +H+ C+ID+ GRAG+L A+++ ++ P+ D +V TLLS
Sbjct: 665 EEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLS 724
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC++ +++ +GE AK L L+P ++ YVLLSN YA W + RKM++D G++KE
Sbjct: 725 ACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKE 784
Query: 541 PSYSMIEVQGTFEKFTVAEFSH 562
P S IEV+ F V + H
Sbjct: 785 PGRSWIEVKNVVHAFFVGDRLH 806
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/482 (32%), Positives = 271/482 (56%), Gaps = 8/482 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+SS+L C+K + QG +HA K G ++ V N V+ LY +CG LA +VF +M
Sbjct: 146 LSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMP 205
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQ 121
R+ V+++ +ISGH Q G ALE F +M L P+ +S ++ACA + L KG Q
Sbjct: 206 HRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQ 265
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H+Y K G +S + SL+ +Y+K G AL+++ + N+V +N ++ F +
Sbjct: 266 LHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQIND 325
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
K FE+F M G+ P++F++ L C+ + ++ G +H L+VK ES+ +V
Sbjct: 326 LAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGV 385
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +YSK+ + +A + +++EKD++SW + IA + L+ FKEM G+ P
Sbjct: 386 LIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQK-CGIWP 444
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D+ AS ++ CAG+ +++ G QIHA + + DV + NALVN+YA+CG I ++ F
Sbjct: 445 DNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSF 504
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
E+ H++ ++WN +++ A L ALK+F +M +G+K + TF+ L+A + +K
Sbjct: 505 EEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIK 564
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE-EYTKKFPLGQDPIVLGTLLS 480
+G+ + KT G S + E LI L G+ G +A+ E+++ ++ + T+++
Sbjct: 565 QGKQIHARVIKT-GHSFETEVGNALISLYGKCGSFEDAKMEFSEMSE--RNEVSWNTIIT 621
Query: 481 AC 482
+C
Sbjct: 622 SC 623
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 133/439 (30%), Positives = 231/439 (52%), Gaps = 5/439 (1%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+HA + G+ IV N +++LY+K G ++ AR+VF+E+S R+ VSW AM+SG+ Q G
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123
Query: 84 HLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
AL + QMH ++P Y+ +S +S+C + +G+ IHA K G+ S FVGN+
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNA 183
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
+I++Y++ G A V+ + + V+FN LI+G + E E+F+ M GL PD
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPD 243
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+ + L C+ DL+KG LH K + S+ + +++ LY K + A F
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFN 303
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ +++ WN + A D K +F +M G+RP+ FT+ IL C +
Sbjct: 304 SSDRTNVVLWNLMLVAFGQINDLAKSFELFCQM-QAAGIRPNQFTYPCILRTCTCTREID 362
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G+QIH+ ++ D+ V L++MY+K G + + ++ + ++VVSW ++IA +
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
H AL F++M+ GI PD++ ++ C +++G ++ G S D+
Sbjct: 423 QHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQG-LQIHARIYVSGYSGDV 481
Query: 441 EHFTCLIDLLGRAGKLLEA 459
+ L++L R G++ EA
Sbjct: 482 SIWNALVNLYARCGRIREA 500
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 182/360 (50%), Gaps = 3/360 (0%)
Query: 103 FASAISACAGI-QSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA 161
FA A+ AC G + +IHA ++ G VGN LI +Y K G A V+ E
Sbjct: 44 FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL 103
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
+ VS+ A+++G+ +N E+ +++ M R G++P + + L C+ + +G
Sbjct: 104 SARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGR 163
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
++H K S FVGN ++ LY + AE+ F + +D +++NT I+ + C
Sbjct: 164 LIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCG 223
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
E L +F+EM G+ PD T +S+LAACA L +Q G Q+H++L + ++ D +
Sbjct: 224 HGEHALEIFEEMQFS-GLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIME 282
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
+L+++Y KCG + + +FN NVV WN ++ A + +LF QM+A GI+
Sbjct: 283 GSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIR 342
Query: 402 PDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
P+ T+ +L C + GE +S+ G D+ LID+ + G L +A
Sbjct: 343 PNQFTYPCILRTCTCTREIDLGEQ-IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARR 401
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 151/296 (51%), Gaps = 9/296 (3%)
Query: 168 SFNALIAGFVENQQPEKGFEVFKLMLRQ--GLLPDRFSFAGGLEICSVSNDLRKGMI--L 223
S +AGF+ ++ P K +F RQ GL P FA L C N R ++ +
Sbjct: 8 SLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGP--LDFACALRACR-GNGRRWQVVPEI 64
Query: 224 HCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY 283
H V L VGN ++ LYSK L+ A + F + +D +SW ++ +
Sbjct: 65 HAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLG 124
Query: 284 EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA 343
E+ L ++++M + GV P + +S+L++C G+ IHA + ++ VGNA
Sbjct: 125 EEALGLYRQM-HRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNA 183
Query: 344 LVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPD 403
++ +Y +CG + ++F +M HR+ V++NT+I+ HA G AL++FE+M+ +G+ PD
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPD 243
Query: 404 SVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
VT LL AC G +++G + + K GIS D L+DL + G + A
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKA-GISSDYIMEGSLLDLYVKCGDVETA 298
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/562 (38%), Positives = 326/562 (58%), Gaps = 4/562 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ISSLL C+ LQ+G LH+ + K GI D I+ +L+LY KCG + A +F+
Sbjct: 246 TISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSS 305
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
N+V W+ M+ Q + + E F QM + PN++ + + C + + G+
Sbjct: 306 DRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGE 365
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH+ S+K G+ S +V LI MY K G+ A V E ++VS+ ++IAG+V+++
Sbjct: 366 QIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHE 425
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ FK M + G+ PD A + C+ N +R+G+ +H + + N
Sbjct: 426 CCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWN 485
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ LY++ I EA +F IE KD I+WN ++ + +E+ L VF M + GV+
Sbjct: 486 ALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRM-DQSGVK 544
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ FTF S L+A A LA ++ GKQIHA +I+ + + VGNAL+++Y KCG +
Sbjct: 545 HNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKME 604
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+EM RN VSWNTII + + H G AL LF+QMK GIKP+ VTFIG+L AC+H GLV
Sbjct: 605 FSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLV 664
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+EG +YF SM YGI P +H+ C+ID+ GRAG+L A+++ ++ P+ D +V TLLS
Sbjct: 665 EEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLS 724
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC++ +++ +GE AK L L+P ++ YVLLSN YA W + RKM++D G++KE
Sbjct: 725 ACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKE 784
Query: 541 PSYSMIEVQGTFEKFTVAEFSH 562
P S IEV+ F V + H
Sbjct: 785 PGRSWIEVKNVVHAFFVGDRLH 806
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 155/482 (32%), Positives = 271/482 (56%), Gaps = 8/482 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+SS+L C+K + QG +HA K G ++ V N V+ LY +CG LA +VF +M
Sbjct: 146 LSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMP 205
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQ 121
R+ V+++ +ISGH Q G ALE F +M L P+ +S ++ACA + L KG Q
Sbjct: 206 HRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQ 265
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H+Y K G +S + SL+ +Y+K G AL+++ + N+V +N ++ F +
Sbjct: 266 LHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQIND 325
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
K FE+F M G+ P++F++ L C+ + ++ G +H L+VK ES+ +V
Sbjct: 326 LAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGV 385
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +YSK+ + +A + +++EKD++SW + IA + L+ FKEM G+ P
Sbjct: 386 LIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQK-CGIWP 444
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D+ AS ++ CAG+ +++ G QIHA + + DV + NALVN+YA+CG I ++ F
Sbjct: 445 DNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSF 504
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
E+ H++ ++WN +++ A L ALK+F +M +G+K + TF+ L+A + +K
Sbjct: 505 EEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIK 564
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE-EYTKKFPLGQDPIVLGTLLS 480
+G+ + KT G S + E LI L G+ G +A+ E+++ ++ + T+++
Sbjct: 565 QGKQIHARVIKT-GHSFETEVGNALISLYGKCGSFEDAKMEFSEMSE--RNEVSWNTIIT 621
Query: 481 AC 482
+C
Sbjct: 622 SC 623
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/439 (30%), Positives = 231/439 (52%), Gaps = 5/439 (1%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+HA + G+ IV N +++LY+K G ++ AR+VF+E+S R+ VSW AM+SG+ Q G
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123
Query: 84 HLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
AL + QMH ++P Y+ +S +S+C + +G+ IHA K G+ S FVGN+
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNA 183
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
+I++Y++ G A V+ + + V+FN LI+G + E E+F+ M GL PD
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPD 243
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+ + L C+ DL+KG LH K + S+ + +++ LY K + A F
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFN 303
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ +++ WN + A D K +F +M G+RP+ FT+ IL C +
Sbjct: 304 SSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQA-AGIRPNQFTYPCILRTCTCTREID 362
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G+QIH+ ++ D+ V L++MY+K G + + ++ + ++VVSW ++IA +
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
H AL F++M+ GI PD++ ++ C +++G ++ G S D+
Sbjct: 423 QHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQG-LQIHARIYVSGYSGDV 481
Query: 441 EHFTCLIDLLGRAGKLLEA 459
+ L++L R G++ EA
Sbjct: 482 SIWNALVNLYARCGRIREA 500
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 182/360 (50%), Gaps = 3/360 (0%)
Query: 103 FASAISACAGI-QSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA 161
FA A+ AC G + +IHA ++ G VGN LI +Y K G A V+ E
Sbjct: 44 FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL 103
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
+ VS+ A+++G+ +N E+ +++ M R G++P + + L C+ + +G
Sbjct: 104 SARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGR 163
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
++H K S FVGN ++ LY + AE+ F + +D +++NT I+ + C
Sbjct: 164 LIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCG 223
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
E L +F+EM G+ PD T +S+LAACA L +Q G Q+H++L + ++ D +
Sbjct: 224 HGEHALEIFEEMQFS-GLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIME 282
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
+L+++Y KCG + + +FN NVV WN ++ A + +LF QM+A GI+
Sbjct: 283 GSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIR 342
Query: 402 PDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
P+ T+ +L C + GE +S+ G D+ LID+ + G L +A
Sbjct: 343 PNQFTYPCILRTCTCTREIDLGEQ-IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARR 401
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 151/296 (51%), Gaps = 9/296 (3%)
Query: 168 SFNALIAGFVENQQPEKGFEVFKLMLRQ--GLLPDRFSFAGGLEICSVSNDLRKGMI--L 223
S +AGF+ ++ P K +F RQ GL P FA L C N R ++ +
Sbjct: 8 SLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGP--LDFACALRACR-GNGRRWQVVPEI 64
Query: 224 HCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY 283
H V L VGN ++ LYSK L+ A + F + +D +SW ++ +
Sbjct: 65 HAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLG 124
Query: 284 EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA 343
E+ L ++++M + GV P + +S+L++C G+ IHA + ++ VGNA
Sbjct: 125 EEALGLYRQM-HRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNA 183
Query: 344 LVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPD 403
++ +Y +CG + ++F +M HR+ V++NT+I+ HA G AL++FE+M+ +G+ PD
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPD 243
Query: 404 SVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
VT LL AC G +++G + + K GIS D L+DL + G + A
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKA-GISSDYIMEGSLLDLYVKCGDVETA 298
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/642 (34%), Positives = 356/642 (55%), Gaps = 73/642 (11%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S LL+ C+++++ + +HA ++K + + N ++++Y KCG + +ARK+FD M E
Sbjct: 23 SKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLE 82
Query: 66 RNL-------------------------------VSWSAMISGHHQAGEHLLALEFFSQM 94
RN+ SW++MISG Q G AL +F+QM
Sbjct: 83 RNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQM 142
Query: 95 H---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
H L NEY F SA+SACAG+Q L G QIH+ + Y S ++G++L+ MY K G
Sbjct: 143 HGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRV 202
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
A V+ E + VS+N+LI + +N ++ ++F M++ G+ PD + A + C
Sbjct: 203 EYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSAC 262
Query: 212 SVSNDLRKGMILHCLTVKC-KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIE------- 263
+ + +++G +H VKC + ++ +GN ++ +Y+K N I EA F ++
Sbjct: 263 ATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSE 322
Query: 264 ------------------------EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
KD+I+WN IA C+ + E+ L +F+ + + V
Sbjct: 323 TSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRE-SV 381
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRL------NQDVGVGNALVNMYAKCGL 353
P +TF ++L ACA LA +Q G+Q H+H+++ + DV VGN+L++MY KCG
Sbjct: 382 WPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGS 441
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ ++F ML ++ VSWN +I +A + G AL++F +M +G PD VT IG+L A
Sbjct: 442 VENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCA 501
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C+HAGL+ EG YF SM +G+ P +H+TC++DLLGRAG L EA+ ++ + D I
Sbjct: 502 CSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAI 561
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
V G+LL+AC++ R++ +GE + K+L + P + PYVLLSN+YA + W +V RK+++
Sbjct: 562 VWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRVRKLMR 621
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
G+ K+P S IE+QG F V + H++ EI +L+T+
Sbjct: 622 QRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTI 663
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 214/436 (49%), Gaps = 53/436 (12%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S S L C+ + L+ G +H+ V + DV + + ++++Y+KCG++ A+ VFDEM
Sbjct: 153 SFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEM 212
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ R+ VSW+++I+ + Q G AL+ F +M + P+E AS +SACA I ++ +GQ
Sbjct: 213 TVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQ 272
Query: 121 QIHAYSLKFG-YASISFVGNSLISMYMKVGYSSDALLV------------------YGEA 161
QIHA +K + + +GN+L+ MY K ++A ++ Y +A
Sbjct: 273 QIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKA 332
Query: 162 FE-------------PNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGL 208
+ +++++NALIAG +N + E+ +F+L+ R+ + P ++F L
Sbjct: 333 SKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLL 392
Query: 209 EICSVSNDLRKGMILHCLTVKCKL------ESNPFVGNTIMALYSKFNLIGEAEKAFRLI 262
C+ DL+ G H +K +S+ FVGN+++ +Y K + + F+ +
Sbjct: 393 NACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHM 452
Query: 263 EEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG 322
EKD +SWN I + K L VF +M + G PD T +L AC+ + G
Sbjct: 453 LEKDCVSWNAMIVGYAQNGFGNKALEVFCKML-ESGEAPDHVTMIGVLCACSHAGLLDEG 511
Query: 323 ----KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIA 377
+ + A M L +V++ + G + + L EM + + + W +++A
Sbjct: 512 RYYFRSMTAQHGLMPLKDHY---TCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLA 568
Query: 378 A---HANHRLGGSALK 390
A H N +LG +K
Sbjct: 569 ACKVHRNIQLGEYVVK 584
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 191/422 (45%), Gaps = 69/422 (16%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
F+ ++ CA +S ++HA +K +AS +F+ N LI +Y K G A ++
Sbjct: 22 FSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRML 81
Query: 163 EPNLVSFNALIAGFVEN-----------QQPE----------KGFE----------VFKL 191
E N+ S+N++I F ++ + P+ GFE F
Sbjct: 82 ERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQ 141
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
M G L + +SF L C+ DL+ G +H L + S+ ++G+ ++ +YSK
Sbjct: 142 MHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGR 201
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ A+ F + + +SWN+ I ++ L +F EM GV PD+ T AS+++
Sbjct: 202 VEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIK-CGVEPDEVTLASVVS 260
Query: 312 ACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKCGLIS--------------- 355
ACA +++++ G+QIHA +++ D+ +GNAL++MYAKC I+
Sbjct: 261 ACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVV 320
Query: 356 ----------------CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG 399
+ +F+ M+ ++V++WN +IA + AL LF +K
Sbjct: 321 SETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRES 380
Query: 400 IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK-----TYGISPDIEHFTCLIDLLGRAG 454
+ P TF LL AC + ++ G + + K YG D+ LID+ + G
Sbjct: 381 VWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCG 440
Query: 455 KL 456
+
Sbjct: 441 SV 442
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 142/302 (47%), Gaps = 30/302 (9%)
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
L D F+ L C+ S R +H +K S F+ N ++ +Y K + A
Sbjct: 15 LFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVAR 74
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS---------------------- 294
K F + E+++ SWN+ I A + + + +F++M
Sbjct: 75 KLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDE 134
Query: 295 --------NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVN 346
+ HG ++++F S L+ACAGL ++ G QIH+ + R DV +G+ALV+
Sbjct: 135 ALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVD 194
Query: 347 MYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVT 406
MY+KCG + + +F+EM R+ VSWN++I + + ALK+F +M G++PD VT
Sbjct: 195 MYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVT 254
Query: 407 FIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
+++AC +KEG+ + K D+ L+D+ + ++ EA
Sbjct: 255 LASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMM 314
Query: 467 PL 468
P+
Sbjct: 315 PI 316
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQ------PDVIVSNHVLNLYAKCGKMILAR 57
+ +LL+ C+ LQ G H+ VLK G + DV V N ++++Y KCG +
Sbjct: 387 TFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGC 446
Query: 58 KVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQ 114
+VF M E++ VSW+AMI G+ Q G ALE F +M P+ + AC+
Sbjct: 447 RVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAG 506
Query: 115 SLVKGQ-QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNAL 172
L +G+ + + + G + ++ + + GY +A L+ + +P+ + + +L
Sbjct: 507 LLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSL 566
Query: 173 IAGFVENQQPEKGFEVFKLML 193
+A ++ + G V K +L
Sbjct: 567 LAACKVHRNIQLGEYVVKKLL 587
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/576 (37%), Positives = 342/576 (59%), Gaps = 5/576 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++ ++ +KTK L++G LHA ++ G P ++NH++N+Y+KCG++ A K+FD M
Sbjct: 7 ALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTM 66
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+RNLVSW+AMISG Q + A+ F M + +P ++ F+SAI ACA + S+ G+
Sbjct: 67 PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGK 126
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H +LKFG S FVG++L MY K G DA V+ E + VS+ A+I G+ +
Sbjct: 127 QMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIG 186
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ E+ FK M+ + + D+ L C + G +H VK ES+ FVGN
Sbjct: 187 EFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGN 246
Query: 241 TIMALYSKFNLIGEAEKAFRLIEE-KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+ +YSK + A F + E ++++S+ I EKGLSVF E+ G+
Sbjct: 247 ALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRR-QGI 305
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
P++FTF+S++ ACA A+++ G Q+HA ++++ ++D V + LV+MY KCGL+ + +
Sbjct: 306 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQ 365
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
F+E+ ++WN++++ H LG A+K FE+M G+KP+++TFI LLT C+HAGL
Sbjct: 366 AFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGL 425
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V+EG YF SM+KTYG+ P EH++C+IDLLGRAG+L EA+E+ + P + + L
Sbjct: 426 VEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 485
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
ACR+ D +G+ A++L L+P + VLLSN+YA++ W DV R ++D +KK
Sbjct: 486 GACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKK 545
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P YS ++V F ++SH + I L L
Sbjct: 546 LPGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKLDXL 581
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 186/366 (50%), Gaps = 5/366 (1%)
Query: 96 LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL 155
+L + A I A + L +G+Q+HA + GY +F+ N L++MY K G AL
Sbjct: 1 MLRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHAL 60
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN 215
++ + NLVS+ A+I+G +N + + F M G +P +F+F+ + C+
Sbjct: 61 KLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLG 120
Query: 216 DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIA 275
+ G +HCL +K + S FVG+ + +YSK + +A K F + KD +SW I
Sbjct: 121 SIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMID 180
Query: 276 ACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN 335
S ++E+ L FK+M D V D S L AC L + + G+ +H+ ++++
Sbjct: 181 GYSKIGEFEEALLAFKKMI-DEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFE 239
Query: 336 QDVGVGNALVNMYAKCGLISCSYKLFN-EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQ 394
D+ VGNAL +MY+K G + + +F + RNVVS+ +I + L +F +
Sbjct: 240 SDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVE 299
Query: 395 MKATGIKPDSVTFIGLLTAC-NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 453
++ GI+P+ TF L+ AC N A L + + + M+ + P + + L+D+ G+
Sbjct: 300 LRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKC 357
Query: 454 GKLLEA 459
G L A
Sbjct: 358 GLLEHA 363
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/574 (37%), Positives = 341/574 (59%), Gaps = 5/574 (0%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
SLL C+ +AL+QG +HA + ++G ++ V +L++Y KCG M A +VFD + R
Sbjct: 317 SLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGR 376
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
N+VSW+AMI+G Q G A FF++M + PN F S + AC+ +L +GQQI
Sbjct: 377 NVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQ 436
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ ++ GY S V +L+SMY K G DA V+ + + N+V++NA+I +V+++Q +
Sbjct: 437 DHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYD 496
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
F+ +L++G+ P+ +F L +C S+ L G +H L +K LES+ V N ++
Sbjct: 497 NALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALV 556
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+++ + A+ F + ++DL+SWNT IA + FK M + G++PD
Sbjct: 557 SMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFK-MMQESGIKPDK 615
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
TF +L ACA ++ G+++HA + + DV VG L++MY KCG I ++++F++
Sbjct: 616 ITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHK 675
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
+ +NV SW ++IA +A H G AL+LF QM+ G+KPD +TF+G L+AC HAGL++EG
Sbjct: 676 LPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEG 735
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
+F SM K + I P +EH+ C++DL GRAG L EA E+ K + D V G LL AC+
Sbjct: 736 LHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQ 794
Query: 484 LRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSY 543
+ +V + E+ A++ L P +V+LSN+YA+ GMW +VA RK++ D G+ K+P
Sbjct: 795 VHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQ 854
Query: 544 SMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
S IEV G F + +H + EI+ L+ L +
Sbjct: 855 SWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHM 888
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/468 (31%), Positives = 257/468 (54%), Gaps = 5/468 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++ S+L+ C+ + + +G L+ +LK G D+ V ++N++ KCG + A KVFD
Sbjct: 212 RTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDN 271
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
+ R+LV+W++MI+G + G A F +M + P++ F S + AC ++L +G
Sbjct: 272 LPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQG 331
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+++HA + G+ + +VG +++SMY K G DAL V+ N+VS+ A+IAGF ++
Sbjct: 332 KKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQH 391
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ ++ F F M+ G+ P+R +F L CS + L++G + ++ S+ V
Sbjct: 392 GRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR 451
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++++Y+K + +A + F I ++++++WN I A Y+ L+ F+ + + G+
Sbjct: 452 TALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKE-GI 510
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+P+ TF SIL C S++ GK +H +++ L D+ V NALV+M+ CG + +
Sbjct: 511 KPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKN 570
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
LFN+M R++VSWNTIIA H A F+ M+ +GIKPD +TF GLL AC
Sbjct: 571 LFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEA 630
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+ EG +++ D+ T LI + + G + +A + K P
Sbjct: 631 LTEGRR-LHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP 677
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/482 (29%), Positives = 269/482 (55%), Gaps = 6/482 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++ S+LL C K K L G ++ + K G+QPD+ + N ++N+YAKCG I A+++FD+
Sbjct: 111 QTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDD 170
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
M E+++ SW+ ++ G+ Q G + A + QM + P++ F S ++ACA +++ KG
Sbjct: 171 MREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKG 230
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
++++ LK G+ + FVG +LI+M++K G DA V+ +LV++ ++I G +
Sbjct: 231 RELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARH 290
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ ++ +F+ M +G+ PD+ +F L C+ L +G +H + ++ +VG
Sbjct: 291 GRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVG 350
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
I+++Y+K + +A + F L++ ++++SW IA + ++ F +M + G+
Sbjct: 351 TAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMI-ESGI 409
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
P+ TF SIL AC+ ++++ G+QI H+I D V AL++MYAKCG + +++
Sbjct: 410 EPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHR 469
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F ++ +NVV+WN +I A+ H +AL F+ + GIKP+S TF +L C +
Sbjct: 470 VFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDS 529
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
++ G+ + + + G+ D+ L+ + G L+ A+ P +D + T++
Sbjct: 530 LELGK-WVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWNTII 587
Query: 480 SA 481
+
Sbjct: 588 AG 589
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 217/403 (53%), Gaps = 5/403 (1%)
Query: 80 QAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
Q E + LE H+ +++ + C ++L G++I+ + K G F+ N
Sbjct: 90 QFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRN 149
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
+LI+MY K G + A ++ + E ++ S+N L+ G+V++ E+ F++ + M++ + P
Sbjct: 150 TLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKP 209
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
D+ +F L C+ + ++ KG L+ L +K +++ FVG ++ ++ K IG+A K F
Sbjct: 210 DKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVF 269
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+ +DL++W + I + +++ ++F+ M + GV+PD F S+L AC ++
Sbjct: 270 DNLPTRDLVTWTSMITGLARHGRFKQACNLFQRME-EEGVQPDKVAFVSLLRACNHPEAL 328
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
+ GK++HA + + + ++ VG A+++MY KCG + + ++F+ + RNVVSW +IA
Sbjct: 329 EQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGF 388
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNS-MEKTYGISP 438
A H A F +M +GI+P+ VTF+ +L AC+ +K G+ + +E YG
Sbjct: 389 AQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDD 448
Query: 439 DIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+ T L+ + + G L +A +K Q+ + +++A
Sbjct: 449 RVR--TALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITA 488
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 177/325 (54%), Gaps = 16/325 (4%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ + +S+L+ C + +L+ G +H ++K G++ D+ VSN +++++ CG ++ A+ +F+
Sbjct: 514 SSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFN 573
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
+M +R+LVSW+ +I+G Q G++ +A ++F M + P++ F ++ACA ++L +
Sbjct: 574 DMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTE 633
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+++HA + + VG LISMY K G DA V+ + + N+ S+ ++IAG+ +
Sbjct: 634 GRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQ 693
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ + ++ E+F M ++G+ PD +F G L C+ + + +G LH + P +
Sbjct: 694 HGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEG--LHHFQSMKEFNIEPRM 751
Query: 239 GN--TIMALYSKFNLIGEA-EKAFRLIEEKDLISWNTFIAACS---HCADYEKGLSVFKE 292
+ ++ L+ + L+ EA E ++ E D W + AC + EK E
Sbjct: 752 EHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLE 811
Query: 293 MS-NDHGVRPDDFTFASILAACAGL 316
+ ND+GV F S + A AG+
Sbjct: 812 LDPNDNGV----FVILSNIYAAAGM 832
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/574 (37%), Positives = 340/574 (59%), Gaps = 5/574 (0%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
SLL C+ +AL+QG +HA + ++G ++ V +L++Y KCG M A +VFD + R
Sbjct: 317 SLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGR 376
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
N+VSW+AMI+G Q G A FF++M + PN F S + AC+ +L +GQQI
Sbjct: 377 NVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQ 436
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ ++ GY S V +L+SMY K G DA V+ + + N+V++NA+I +V+++Q +
Sbjct: 437 DHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYD 496
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
F+ +L++G+ P+ +F L +C S+ L G +H L +K LES+ V N ++
Sbjct: 497 NALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALV 556
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+++ + A+ F + ++DL+SWNT IA + FK M + G++PD
Sbjct: 557 SMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFK-MMQESGIKPDK 615
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
TF +L ACA ++ G+++HA + + DV VG L++MY KCG I ++++F++
Sbjct: 616 ITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHK 675
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
+ +NV SW ++I +A H G AL+LF QM+ G+KPD +TF+G L+AC HAGL++EG
Sbjct: 676 LPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEG 735
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
+F SM K + I P +EH+ C++DL GRAG L EA E+ K + D V G LL AC+
Sbjct: 736 LHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQ 794
Query: 484 LRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSY 543
+ +V + E+ A++ L P +V+LSN+YA+ GMW +VA RK++ D G+ K+P
Sbjct: 795 VHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQ 854
Query: 544 SMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
S IEV G F + +H + EI+ L+ L +
Sbjct: 855 SWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHM 888
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/468 (31%), Positives = 257/468 (54%), Gaps = 5/468 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++ S+L+ C+ + + +G L+ +LK G D+ V ++N++ KCG + A KVFD
Sbjct: 212 RTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDN 271
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
+ R+LV+W++MI+G + G A F +M + P++ F S + AC ++L +G
Sbjct: 272 LPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQG 331
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+++HA + G+ + +VG +++SMY K G DAL V+ N+VS+ A+IAGF ++
Sbjct: 332 KKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQH 391
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ ++ F F M+ G+ P+R +F L CS + L++G + ++ S+ V
Sbjct: 392 GRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR 451
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++++Y+K + +A + F I ++++++WN I A Y+ L+ F+ + + G+
Sbjct: 452 TALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKE-GI 510
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+P+ TF SIL C S++ GK +H +++ L D+ V NALV+M+ CG + +
Sbjct: 511 KPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKN 570
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
LFN+M R++VSWNTIIA H A F+ M+ +GIKPD +TF GLL AC
Sbjct: 571 LFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEA 630
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+ EG +++ D+ T LI + + G + +A + K P
Sbjct: 631 LTEGRR-LHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP 677
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 140/482 (29%), Positives = 269/482 (55%), Gaps = 6/482 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++ S+LL C K K L G ++ + K G+QPD+ + N ++N+YAKCG I A+++FD+
Sbjct: 111 QTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDD 170
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
M E+++ SW+ ++ G+ Q G + A + QM + P++ F S ++ACA +++ KG
Sbjct: 171 MREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKG 230
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
++++ LK G+ + FVG +LI+M++K G DA V+ +LV++ ++I G +
Sbjct: 231 RELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARH 290
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ ++ +F+ M +G+ PD+ +F L C+ L +G +H + ++ +VG
Sbjct: 291 GRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVG 350
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
I+++Y+K + +A + F L++ ++++SW IA + ++ F +M + G+
Sbjct: 351 TAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMI-ESGI 409
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
P+ TF SIL AC+ ++++ G+QI H+I D V AL++MYAKCG + +++
Sbjct: 410 EPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHR 469
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F ++ +NVV+WN +I A+ H +AL F+ + GIKP+S TF +L C +
Sbjct: 470 VFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDS 529
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
++ G+ + + + G+ D+ L+ + G L+ A+ P +D + T++
Sbjct: 530 LELGK-WVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWNTII 587
Query: 480 SA 481
+
Sbjct: 588 AG 589
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 217/403 (53%), Gaps = 5/403 (1%)
Query: 80 QAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
Q E + LE H+ +++ + C ++L G++I+ + K G F+ N
Sbjct: 90 QFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWN 149
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
+LI+MY K G + A ++ + E ++ S+N L+ G+V++ E+ F++ + M++ + P
Sbjct: 150 TLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKP 209
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
D+ +F L C+ + ++ KG L+ L +K +++ FVG ++ ++ K IG+A K F
Sbjct: 210 DKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVF 269
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+ +DL++W + I + +++ ++F+ M + GV+PD F S+L AC ++
Sbjct: 270 DNLPTRDLVTWTSMITGLARHGRFKQACNLFQRME-EEGVQPDKVAFVSLLRACNHPEAL 328
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
+ GK++HA + + + ++ VG A+++MY KCG + + ++F+ + RNVVSW +IA
Sbjct: 329 EQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGF 388
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNS-MEKTYGISP 438
A H A F +M +GI+P+ VTF+ +L AC+ +K G+ + +E YG
Sbjct: 389 AQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDD 448
Query: 439 DIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+ T L+ + + G L +A +K Q+ + +++A
Sbjct: 449 RVR--TALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITA 488
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 176/325 (54%), Gaps = 16/325 (4%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ + +S+L+ C + +L+ G +H ++K G++ D+ VSN +++++ CG ++ A+ +F+
Sbjct: 514 SSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFN 573
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
+M +R+LVSW+ +I+G Q G++ +A ++F M + P++ F ++ACA ++L +
Sbjct: 574 DMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTE 633
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+++HA + + VG LISMY K G DA V+ + + N+ S+ ++I G+ +
Sbjct: 634 GRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQ 693
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ + ++ E+F M ++G+ PD +F G L C+ + + +G LH + P +
Sbjct: 694 HGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEG--LHHFQSMKEFNIEPRM 751
Query: 239 GN--TIMALYSKFNLIGEA-EKAFRLIEEKDLISWNTFIAACS---HCADYEKGLSVFKE 292
+ ++ L+ + L+ EA E ++ E D W + AC + EK E
Sbjct: 752 EHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLE 811
Query: 293 MS-NDHGVRPDDFTFASILAACAGL 316
+ ND+GV F S + A AG+
Sbjct: 812 LDPNDNGV----FVILSNIYAAAGM 832
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/572 (37%), Positives = 342/572 (59%), Gaps = 13/572 (2%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
++S++ C++ +++G LH V++ G DV V +++ Y+K G + AR VFD++S
Sbjct: 154 LASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLS 213
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
E+ V+W+ +I+G+ + G ++LE F+QM +++P+ Y+ +S +SAC+ ++ L G+Q
Sbjct: 214 EKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQ 273
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
IHAY L+ G V N LI Y K ++ + N++S+ +I+G+++N
Sbjct: 274 IHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSF 333
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ ++F M R G PD F+ L C L +G +H T+K LES+ FV N
Sbjct: 334 DWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNG 393
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR- 300
++ +Y+K NL+ +A+K F ++ E+++IS+N I S + L +F EM VR
Sbjct: 394 LIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMR----VRL 449
Query: 301 --PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
P++FTFA+++ A + LAS++HG+Q H L++M L+ V NALV+MYAKCG I +
Sbjct: 450 QKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEAR 509
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
K+FN + R+VV WN++I+ HA H AL +F +M GI+P+ VTF+ +L+AC+HAG
Sbjct: 510 KMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAG 569
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
V++G +FNSM +GI P EH+ C++ LLGR+GKL EA+E+ +K P+ IV +L
Sbjct: 570 RVEDGLNHFNSM-PGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSL 628
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
LSACR+ +V +G+ A+ P + Y+LLSN++AS GMW DV R + S +
Sbjct: 629 LSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVV 688
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSH--SKIGEI 568
KEP S IEV F + +H + IG +
Sbjct: 689 KEPGRSWIEVNNKVNVFIARDTTHREADIGSV 720
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 136/444 (30%), Positives = 239/444 (53%), Gaps = 10/444 (2%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+H ++ G+Q D ++N ++N+ +K ++ AR VFD+M +NL++WS+M+S + Q G
Sbjct: 71 IHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGY 130
Query: 84 HLLALEFFSQMHLL----PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
AL F + PNE++ AS I AC + + KG Q+H + ++ G+ +VG
Sbjct: 131 SEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGT 190
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
SLI Y K G +A LV+ + E V++ +IAG+ + + E+F M ++P
Sbjct: 191 SLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVP 250
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
DR+ + L CS+ L G +H ++ E + V N ++ Y+K N + K F
Sbjct: 251 DRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLF 310
Query: 260 RLIEEKDLISWNTFIAA-CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
+ K++ISW T I+ + D+E + +F EM N G +PD F S+L +C +
Sbjct: 311 DQMVVKNIISWTTMISGYMQNSFDWE-AMKLFGEM-NRLGWKPDGFACTSVLTSCGSREA 368
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA 378
++ G+Q+HA+ I+ L D V N L++MYAK L+ + K+F+ M +NV+S+N +I
Sbjct: 369 LEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEG 428
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT-YGIS 437
+++ AL+LF +M+ KP+ TF L+TA ++ ++ G+ + N + K
Sbjct: 429 YSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFC 488
Query: 438 PDIEHFTCLIDLLGRAGKLLEAEE 461
P + + L+D+ + G + EA +
Sbjct: 489 PFVTN--ALVDMYAKCGSIEEARK 510
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 187/372 (50%), Gaps = 11/372 (2%)
Query: 95 HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDA 154
+L P FA+ + ++ + IH + G S +F+ N LI++ K +A
Sbjct: 44 NLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNA 103
Query: 155 LLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVF-KLMLRQGLLPDRFSFAGGLEICSV 213
+V+ + NL++++++++ + + E+ VF L + G P+ F A + C+
Sbjct: 104 RVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQ 163
Query: 214 SNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTF 273
+ KG LH V+ + + +VG +++ YSK I EA F + EK ++W T
Sbjct: 164 LGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTI 223
Query: 274 IAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR 333
IA + C L +F +M + V PD + +S+L+AC+ L ++ GKQIHA+++R
Sbjct: 224 IAGYTKCGRSAVSLELFAQM-RETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRG 282
Query: 334 LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFE 393
DV V N L++ Y KC + KLF++M+ +N++SW T+I+ + + A+KLF
Sbjct: 283 TEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFG 342
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEH----FTCLIDL 449
+M G KPD +LT+C +++G Y I ++E LID+
Sbjct: 343 EMNRLGWKPDGFACTSVLTSCGSREALEQGRQV-----HAYTIKANLESDEFVKNGLIDM 397
Query: 450 LGRAGKLLEAEE 461
++ L++A++
Sbjct: 398 YAKSNLLIDAKK 409
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++L+ S +L+ G H ++KMG+ V+N ++++YAKCG + ARK+F+
Sbjct: 456 TFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSS 515
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
R++V W++MIS H Q GE AL F +M + PN F + +SAC+
Sbjct: 516 IWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACS 566
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/573 (37%), Positives = 328/573 (57%), Gaps = 5/573 (0%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C++ ++L+QG +HAA+LK GIQP+ + N +L++YAKCG + AR+VFD + +RN
Sbjct: 53 LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRN 112
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHA 124
+VSW+AMI ++L A + + M L P++ F S ++A + L GQ++H
Sbjct: 113 IVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHM 172
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
++ G VG SL+ MY K G S A +++ E N+V++ LIAG+ + Q +
Sbjct: 173 EIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDV 232
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
E+ + M + + P++ +FA L+ C+ L G +H ++ +V N+++
Sbjct: 233 ALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLIT 292
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y K + EA K F + +D+++W + + +++ +++F+ M G++PD
Sbjct: 293 MYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQ-QGIKPDKM 351
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
TF S+L +C+ A +Q GK+IH L+ N DV + +ALV+MYAKCG + + +FN+M
Sbjct: 352 TFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQM 411
Query: 365 LHRNVVSWNTIIAAH-ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
RNVV+W II A H AL+ F+QMK GIKPD VTF +L+AC H GLV+EG
Sbjct: 412 SERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEG 471
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
+F SM YGI P +EH++C +DLLGRAG L EAE P P V G LLSACR
Sbjct: 472 RKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACR 531
Query: 484 LRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSY 543
+ DV GER A+ + L P YV LS++YA+ G + D R++++ + KEP
Sbjct: 532 VHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQ 591
Query: 544 SMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
S IEV G F V + SH + +I L L+
Sbjct: 592 SWIEVDGKVHVFHVEDKSHPESEQIYVELGKLT 624
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 212/400 (53%), Gaps = 6/400 (1%)
Query: 102 IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA 161
+F + CA ++SL +G+++HA LK G ++ N+L+SMY K G +DA V+
Sbjct: 49 VFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSI 108
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
+ N+VS+ A+I FV + + F+ ++ M G PD+ +F L + L+ G
Sbjct: 109 RDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQ 168
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
+H V+ LE P VG +++ +Y+K I +A F + EK++++W IA +
Sbjct: 169 KVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQG 228
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
+ L + + M V P+ TFASIL C A+++HGK++H ++I+ +++ V
Sbjct: 229 QVDVALELLETMQQAE-VAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVV 287
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
N+L+ MY KCG + + KLF+++ HR+VV+W ++ +A A+ LF +M+ GIK
Sbjct: 288 NSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIK 347
Query: 402 PDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA-- 459
PD +TF +LT+C+ ++EG+ + G + D+ + L+ + + G + +A
Sbjct: 348 PDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHA-GYNLDVYLQSALVSMYAKCGSMDDASL 406
Query: 460 --EEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQ 497
+ +++ + I+ G R R + +++ KQ
Sbjct: 407 VFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQ 446
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 180/324 (55%), Gaps = 9/324 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
SLL+ + + LQ G +H +++ G++ + V ++ +YAKCG + AR +FD + E+
Sbjct: 153 SLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEK 212
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
N+V+W+ +I+G+ Q G+ +ALE M + PN+ FAS + C +L G+++H
Sbjct: 213 NVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVH 272
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
Y ++ GY +V NSLI+MY K G +A ++ + ++V++ A++ G+ + +
Sbjct: 273 RYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHD 332
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ +F+ M +QG+ PD+ +F L CS L++G +H V + ++ + ++
Sbjct: 333 EAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALV 392
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY---EKGLSVFKEMSNDHGVR 300
++Y+K + +A F + E+++++W I C CA + + L F +M G++
Sbjct: 393 SMYAKCGSMDDASLVFNQMSERNVVAWTAIITGC--CAQHGRCREALEYFDQMKK-QGIK 449
Query: 301 PDDFTFASILAACAGLASVQHGKQ 324
PD TF S+L+AC + V+ G++
Sbjct: 450 PDKVTFTSVLSACTHVGLVEEGRK 473
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 203/422 (48%), Gaps = 57/422 (13%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L C+ AL+ G +H +++ G ++ V N ++ +Y KCG + ARK+F ++
Sbjct: 251 TFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDL 310
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
R++V+W+AM++G+ Q G H A+ F +M + P++ F S +++C+ L +G+
Sbjct: 311 PHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGK 370
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG-FVEN 179
+IH + GY ++ ++L+SMY K G DA LV+ + E N+V++ A+I G ++
Sbjct: 371 RIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQH 430
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ + E F M +QG+ PD+ +F L C+ + +G H ++ P V
Sbjct: 431 GRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGR-KHFRSMYLDYGIKPMVE 489
Query: 240 NTIMALYSKF-NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
+ YS F +L+G +A L E +++I FI
Sbjct: 490 H-----YSCFVDLLG---RAGHLEEAENVILSMPFI------------------------ 517
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
P + ++L+AC + V+ G++ +++++ + D G AL ++YA G +
Sbjct: 518 --PGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDD-GAYVALSSIYAAAGRYEDAE 574
Query: 359 KLFNEMLHRNVV-----SWNTIIA-AHANHRLGGSAL----------KLFEQMKATGIKP 402
K+ M R+VV SW + H H S KL EQ+K G P
Sbjct: 575 KVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGYVP 634
Query: 403 DS 404
D+
Sbjct: 635 DT 636
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 138/282 (48%), Gaps = 6/282 (2%)
Query: 188 VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYS 247
+ M+ QG F G L+ C+ L +G +H +K ++ N ++ NT++++Y+
Sbjct: 34 IMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYA 93
Query: 248 KFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK--EMSNDHGVRPDDFT 305
K + +A + F I +++++SW I A K L FK E G +PD T
Sbjct: 94 KCGSLTDARRVFDSIRDRNIVSWTAMIEA---FVAGNKNLEAFKCYETMKLAGCKPDKVT 150
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
F S+L A +Q G+++H ++ L + VG +LV MYAKCG IS + +F+ +
Sbjct: 151 FVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLP 210
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
+NVV+W +IA +A AL+L E M+ + P+ +TF +L C ++ G+
Sbjct: 211 EKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKK 270
Query: 426 YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+ ++ G ++ LI + + G L EA + P
Sbjct: 271 VHRYIIQS-GYGRELWVVNSLITMYCKCGGLEEARKLFSDLP 311
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 97/186 (52%), Gaps = 5/186 (2%)
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
G R F +L CA L S++ G+++HA +++ + + + N L++MYAKCG ++
Sbjct: 41 QGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTD 100
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ ++F+ + RN+VSW +I A A K +E MK G KPD VTF+ LL A +
Sbjct: 101 ARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTN 160
Query: 417 AGLVKEGE-AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
L++ G+ + +E + P + T L+ + + G + +A + P + +V
Sbjct: 161 PELLQLGQKVHMEIVEAGLELEPRVG--TSLVGMYAKCGDISKARVIFDRLP--EKNVVT 216
Query: 476 GTLLSA 481
TLL A
Sbjct: 217 WTLLIA 222
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/572 (37%), Positives = 323/572 (56%), Gaps = 4/572 (0%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C++ ++L+QG +HAA+LK GIQP+ + N +L++YAKCG + AR+VFD + +RN
Sbjct: 102 LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRN 161
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHA 124
+VSW+AMI ++L A + + M L P++ F S ++A + L GQ++H
Sbjct: 162 IVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHM 221
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
K G VG SL+ MY K G S A +++ + E N+V++ LIAG+ + Q +
Sbjct: 222 EIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDV 281
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
E+ + M + + P++ ++ L+ C+ L G +H ++ +V N ++
Sbjct: 282 ALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALIT 341
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y K + EA K F + +D+++W + + +++ + +F+ M G++PD
Sbjct: 342 MYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQ-QGIKPDKM 400
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
TF S L +C+ A +Q GK IH L+ + DV + +ALV+MYAKCG + + +FN+M
Sbjct: 401 TFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQM 460
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
RNVV+W +I A H AL+ FEQMK GIKPD VTF +L+AC H GLV+EG
Sbjct: 461 SERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGR 520
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRL 484
+F SM YGI P +EH++C +DLLGRAG L EAE P P V G LLSACR+
Sbjct: 521 KHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRI 580
Query: 485 RRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYS 544
DV GER A+ + L P YV LSN+YA+ G + D R++++ + KEP S
Sbjct: 581 HSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQS 640
Query: 545 MIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
IEV G F V + SH + EI L L+
Sbjct: 641 WIEVDGKVHVFHVEDKSHPEAKEIYAELGKLT 672
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 194/359 (54%), Gaps = 2/359 (0%)
Query: 102 IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA 161
+F + CA ++SL +G+++HA LK G ++ N+L+SMY K G +DA V+
Sbjct: 98 VFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGI 157
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
+ N+VS+ A+I FV Q + ++ ++ M G PD+ +F L + L+ G
Sbjct: 158 RDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQ 217
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
+H K LE P VG +++ +Y+K I +A+ F + EK++++W IA +
Sbjct: 218 KVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQG 277
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
+ L + ++M V P+ T+ SIL C +++HGK++H ++I+ +++ V
Sbjct: 278 QVDVALELLEKMQQAE-VAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVV 336
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
NAL+ MY KCG + + KLF ++ HR+VV+W ++ +A A+ LF +M+ GIK
Sbjct: 337 NALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIK 396
Query: 402 PDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
PD +TF LT+C+ ++EG++ + G S D+ + L+ + + G + +A
Sbjct: 397 PDKMTFTSALTSCSSPAFLQEGKSIHQQLVHA-GYSLDVYLQSALVSMYAKCGSMDDAR 454
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/460 (26%), Positives = 233/460 (50%), Gaps = 43/460 (9%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
SLL+ + + LQ G +H + K G++ + V ++ +YAKCG + A+ +FD++ E+
Sbjct: 202 SLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEK 261
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
N+V+W+ +I+G+ Q G+ +ALE +M + PN+ + S + C +L G+++H
Sbjct: 262 NVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVH 321
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
Y ++ GY +V N+LI+MY K G +A ++G+ ++V++ A++ G+ + +
Sbjct: 322 RYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHD 381
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ ++F+ M +QG+ PD+ +F L CS L++G +H V + ++ + ++
Sbjct: 382 EAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALV 441
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
++Y+K + +A F + E+++++W I C+ + L F++M G++PD
Sbjct: 442 SMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKK-QGIKPDK 500
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
TF S+L+AC + V+ G++ H M L D G+ +V Y SC F +
Sbjct: 501 VTFTSVLSACTHVGLVEEGRK---HFRSMYL--DYGI-KPMVEHY------SC----FVD 544
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT-GIKPDSVTFIGLLTACNHAGLVKE 422
+L R A H L+ E + T +P + LL+AC V+
Sbjct: 545 LLGR---------AGH---------LEEAENVILTMPFQPGPSVWGALLSACRIHSDVER 586
Query: 423 GEAYFNSMEKTYGISPDIE-HFTCLIDLLGRAGKLLEAEE 461
GE + E + PD + + L ++ AG+ +AE+
Sbjct: 587 GE---RAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEK 623
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 206/421 (48%), Gaps = 56/421 (13%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L C+ AL+ G +H +++ G ++ V N ++ +Y KCG + ARK+F ++
Sbjct: 300 TYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDL 359
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
R++V+W+AM++G+ Q G H A++ F +M + P++ F SA+++C+ L +G+
Sbjct: 360 PHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGK 419
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IH + GY+ ++ ++L+SMY K G DA LV+ + E N+V++ A+I G ++
Sbjct: 420 SIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHG 479
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ + E F+ M +QG+ PD+ +F L C+ + +G H ++ P V +
Sbjct: 480 RCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGR-KHFRSMYLDYGIKPMVEH 538
Query: 241 TIMALYSKF-NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
YS F +L+G +A L E +++I F
Sbjct: 539 -----YSCFVDLLG---RAGHLEEAENVILTMPF-------------------------- 564
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+P + ++L+AC + V+ G++ +++++ + D G AL N+YA G + K
Sbjct: 565 QPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDD-GAYVALSNIYAAAGRYEDAEK 623
Query: 360 LFNEMLHRNVV-----SWNTIIA-AHANH----------RLGGSALKLFEQMKATGIKPD 403
+ M R+VV SW + H H + KL EQ+K G PD
Sbjct: 624 VRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPD 683
Query: 404 S 404
+
Sbjct: 684 T 684
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 140/282 (49%), Gaps = 6/282 (2%)
Query: 188 VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYS 247
+ M+ QG F G L+ C+ L +G +H +K ++ N ++ NT++++Y+
Sbjct: 83 ILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYA 142
Query: 248 KFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK--EMSNDHGVRPDDFT 305
K + +A + F I +++++SW I A + L +K E G +PD T
Sbjct: 143 KCGSLTDARRVFDGIRDRNIVSWTAMIEA---FVAGNQNLEAYKCYETMKLAGCKPDKVT 199
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
F S+L A +Q G+++H + + L + VG +LV MYAKCG IS + +F+++
Sbjct: 200 FVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLP 259
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
+NVV+W +IA +A AL+L E+M+ + P+ +T+ +L C ++ G+
Sbjct: 260 EKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKK 319
Query: 426 YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+ ++ G +I LI + + G L EA + P
Sbjct: 320 VHRYIIQS-GYGREIWVVNALITMYCKCGGLKEARKLFGDLP 360
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 3/185 (1%)
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
G R F +L CA L S++ G+++HA +++ + + + N L++MYAKCG ++
Sbjct: 90 QGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTD 149
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ ++F+ + RN+VSW +I A A K +E MK G KPD VTF+ LL A +
Sbjct: 150 ARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTN 209
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
L++ G+ + K G+ + T L+ + + G + +A+ K P + +V
Sbjct: 210 PELLQVGQKVHMEIAKA-GLELEPRVGTSLVGMYAKCGDISKAQVIFDKLP--EKNVVTW 266
Query: 477 TLLSA 481
TLL A
Sbjct: 267 TLLIA 271
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/575 (37%), Positives = 333/575 (57%), Gaps = 8/575 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C+ + A G +H +L+ GI+ + ++N ++N+Y +CG ++ A+ VF+ R+
Sbjct: 492 LLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARD 551
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
++SW++MI+GH Q G + A + F +M L P++ FAS + C ++L G+QIH
Sbjct: 552 IISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHM 611
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
++ G +GN+LI+MY++ G DA V+ N++S+ A+I GF + + K
Sbjct: 612 LIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRK 671
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKG--MILHCLTVKCKLESNPFVGNTI 242
FE+F M G P + +F+ L+ C S L +G +I H L +L++ VGN +
Sbjct: 672 AFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTG--VGNAL 729
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
++ YSK + +A K F + +D++SWN IA + L +M + GV +
Sbjct: 730 ISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQM-QEQGVVLN 788
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
F+F SIL AC+ ++++ GK++HA +++ ++ DV VG AL++MYAKCG + + ++F+
Sbjct: 789 KFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFD 848
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+NVV+WN +I A+A H L AL F M GIKPD TF +L+ACNH+GLV E
Sbjct: 849 NFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVME 908
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G F+S+E +G+SP IEH+ CL+ LLGRAG+ EAE + P D V TLL AC
Sbjct: 909 GNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGAC 968
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
R+ +V + E A L + YVLLSN+YA+ G W DVA R++++ G++KEP
Sbjct: 969 RIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPG 1028
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
S IEV +F A+ SH + EI LK LSL
Sbjct: 1029 RSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSL 1063
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/456 (29%), Positives = 260/456 (57%), Gaps = 5/456 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
L+ +C++ ++L + +HA +++ G+ PD+ +SN ++N+Y KC + A +VF +M R+
Sbjct: 88 LVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRD 147
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
++SW+++IS + Q G A + F +M +P++ + S ++AC L G++IH+
Sbjct: 148 VISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHS 207
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
++ GY V NSL++MY K A V+ + ++VS+N ++ + + E+
Sbjct: 208 KIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEE 267
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
+F M +G+ PD+ ++ L+ + + L +G +H L V L S+ VG +
Sbjct: 268 CIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALAT 327
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
++ + + A++A ++D++ +N IAA + YE+ + +M +D GV +
Sbjct: 328 MFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSD-GVVMNRT 386
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T+ S+L AC+ ++ G+ IH+H+ + + DV +GN+L++MYA+CG + + +LFN M
Sbjct: 387 TYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTM 446
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
R+++SWN IIA +A G A+KL++QM++ G+KP VTF+ LL+AC ++ +G+
Sbjct: 447 PKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGK 506
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
+ ++ GI + L+++ R G ++EA+
Sbjct: 507 MIHEDILRS-GIKSNGHLANALMNMYRRCGSIMEAQ 541
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 139/464 (29%), Positives = 247/464 (53%), Gaps = 5/464 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+LL + L +G +H + G+ D+ V + ++ +CG + A++ + ++R
Sbjct: 289 NLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADR 348
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
++V ++A+I+ Q G + A E + QM ++ N + S ++AC+ ++L G+ IH
Sbjct: 349 DVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIH 408
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
++ + G++S +GNSLISMY + G A ++ + +L+S+NA+IAG+ +
Sbjct: 409 SHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRG 468
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ +++K M +G+ P R +F L C+ S+ G ++H ++ ++SN + N +M
Sbjct: 469 EAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALM 528
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y + I EA+ F +D+ISWN+ IA + YE +F EM + G+ PD
Sbjct: 529 NMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKE-GLEPDK 587
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
TFAS+L C +++ G+QIH +I L DV +GNAL+NMY +CG + +Y++F+
Sbjct: 588 ITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHS 647
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
+ HRNV+SW +I A+ A +LF QM+ G KP TF +L AC + + EG
Sbjct: 648 LRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEG 707
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+ + + G D LI ++G + +A + K P
Sbjct: 708 KKVIAHILNS-GYELDTGVGNALISAYSKSGSMTDARKVFDKMP 750
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 246/459 (53%), Gaps = 7/459 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C L+ G +H+ +++ G Q D V N +LN+Y KC + AR+VF + R
Sbjct: 188 SILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRR 247
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
++VS++ M+ + Q + F QM + P++ + + + A L +G++IH
Sbjct: 248 DVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIH 307
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF-EPNLVSFNALIAGFVENQQP 182
++ G S VG +L +M+++ G + A EAF + ++V +NALIA ++
Sbjct: 308 KLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQAL-EAFADRDVVVYNALIAALAQHGHY 366
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E+ FE + M G++ +R ++ L CS S L G ++H + S+ +GN++
Sbjct: 367 EEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSL 426
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+++Y++ + A + F + ++DLISWN IA + D + + ++K+M ++ GV+P
Sbjct: 427 ISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSE-GVKPG 485
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
TF +L+AC ++ GK IH ++R + + + NAL+NMY +CG I + +F
Sbjct: 486 RVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFE 545
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
R+++SWN++IA HA H +A KLF +MK G++PD +TF +L C + ++
Sbjct: 546 GTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALEL 605
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
G + ++ G+ D+ LI++ R G L +A E
Sbjct: 606 GRQIHMLIIES-GLQLDVNLGNALINMYIRCGSLQDAYE 643
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 207/400 (51%), Gaps = 13/400 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L C +AL+ G +H +++ G+Q DV + N ++N+Y +CG + A +VF +
Sbjct: 589 TFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSL 648
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
RN++SW+AMI G GE A E F QM P + F+S + AC L +G+
Sbjct: 649 RHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGK 708
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++ A+ L GY + VGN+LIS Y K G +DA V+ + +++S+N +IAG+ +N
Sbjct: 709 KVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNG 768
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ M QG++ ++FSF L CS + L +G +H VK K++ + VG
Sbjct: 769 LGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGA 828
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++++Y+K + EA++ F EK++++WN I A + K L F M + G++
Sbjct: 829 ALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKE-GIK 887
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCSYK 359
PD TF SIL+AC V G +I + L L+ + LV + + G +
Sbjct: 888 PDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAET 947
Query: 360 LFNEM-LHRNVVSWNTIIAA---HANHRL----GGSALKL 391
L N+M + W T++ A H N L +ALKL
Sbjct: 948 LINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKL 987
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 212/432 (49%), Gaps = 3/432 (0%)
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYS 126
NLVS M H+ E + N + + C +SL + ++IHA
Sbjct: 49 NLVSVKVMRDEQHRGSEREDLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQM 108
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
++ G F+ N LI+MY+K SDA V+ + +++S+N+LI+ + + +K F
Sbjct: 109 VEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAF 168
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
++F+ M G +P + ++ L C +L G +H ++ + +P V N+++ +Y
Sbjct: 169 QLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMY 228
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
K + A + F I +D++S+NT + + A E+ + +F +MS++ G+ PD T+
Sbjct: 229 GKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSE-GIPPDKVTY 287
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
++L A + + GK+IH + LN D+ VG AL M+ +CG ++ + +
Sbjct: 288 INLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFAD 347
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
R+VV +N +IAA A H A + + QM++ G+ + T++ +L AC+ + + GE
Sbjct: 348 RDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELI 407
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRR 486
+ + + G S D++ LI + R G L A E P +D I +++ R
Sbjct: 408 HSHISEV-GHSSDVQIGNSLISMYARCGDLPRARELFNTMP-KRDLISWNAIIAGYARRE 465
Query: 487 DVVIGERLAKQL 498
D +L KQ+
Sbjct: 466 DRGEAMKLYKQM 477
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/576 (37%), Positives = 330/576 (57%), Gaps = 4/576 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ISSLL C+ LQ+G LH+ + K GI D I+ +L+LY KCG + A +F+
Sbjct: 246 TISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSS 305
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
N+V W+ M+ Q + + E F QM + PN++ + + C + + G+
Sbjct: 306 DRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGE 365
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH+ S+K G+ S +V LI MY K G+ A V E ++VS+ ++IAG+V+++
Sbjct: 366 QIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHE 425
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ FK M + G+ PD A + C+ N +R+G+ +H + + N
Sbjct: 426 CCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWN 485
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ LY++ I EA +F +E KD I+ N ++ + +E+ L VF M + GV+
Sbjct: 486 ALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRM-DQSGVK 544
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ FTF S L+A A LA ++ GKQIHA +I+ + + VGNAL+++Y KCG +
Sbjct: 545 HNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKME 604
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+EM RN VSWNTII + + H G AL LF+QMK GIKP+ VTFIG+L AC+H GLV
Sbjct: 605 FSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLV 664
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+EG +YF SM YGI P +H+ C+ID+ GRAG+L A+++ ++ P+ D +V TLLS
Sbjct: 665 EEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLS 724
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC++ +++ +GE AK L L+P ++ YVLLSN YA W + RKM++D G++KE
Sbjct: 725 ACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKE 784
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
P S IEV+ F V + H +I L ++
Sbjct: 785 PGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVIN 820
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 154/482 (31%), Positives = 269/482 (55%), Gaps = 8/482 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+SS+L C+K + QG +HA K G ++ V N V+ LY +CG LA +VF +M
Sbjct: 146 LSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMP 205
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQ 121
R+ V+++ +ISGH Q G ALE F +M L P+ +S ++ACA + L KG Q
Sbjct: 206 HRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQ 265
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H+Y K G +S + SL+ +Y+K G AL+++ + N+V +N ++ F +
Sbjct: 266 LHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQIND 325
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
K FE+F M G+ P++F++ L C+ + ++ G +H L+VK ES+ +V
Sbjct: 326 LAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGV 385
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +YSK+ + +A + +++EKD++SW + IA + L+ FKEM G+ P
Sbjct: 386 LIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQK-CGIWP 444
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D+ AS ++ CAG+ +++ G QIHA + + DV + NALVN+YA+CG I ++ F
Sbjct: 445 DNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSF 504
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
EM ++ ++ N +++ A L ALK+F +M +G+K + TF+ L+A + +K
Sbjct: 505 EEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIK 564
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE-EYTKKFPLGQDPIVLGTLLS 480
+G+ + KT G S + E LI L G+ G +A+ E+++ ++ + T+++
Sbjct: 565 QGKQIHARVIKT-GHSFETEVGNALISLYGKCGSFEDAKMEFSEMSE--RNEVSWNTIIT 621
Query: 481 AC 482
+C
Sbjct: 622 SC 623
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 133/439 (30%), Positives = 231/439 (52%), Gaps = 5/439 (1%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+HA + G+ IV N +++LY+K G ++ AR+VF+E+S R+ VSW AM+SG+ Q G
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123
Query: 84 HLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
AL + QMH ++P Y+ +S +S+C + +G+ IHA K G+ S FVGN+
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNA 183
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
+I++Y++ G A V+ + + V+FN LI+G + E E+F+ M GL PD
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPD 243
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+ + L C+ DL+KG LH K + S+ + +++ LY K + A F
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFN 303
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ +++ WN + A D K +F +M G+RP+ FT+ IL C +
Sbjct: 304 SSDRTNVVLWNLMLVAFGQINDLAKSFELFCQM-QAAGIRPNQFTYPCILRTCTCTREID 362
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G+QIH+ ++ D+ V L++MY+K G + + ++ + ++VVSW ++IA +
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
H AL F++M+ GI PD++ ++ C +++G ++ G S D+
Sbjct: 423 QHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQG-LQIHARIYVSGYSGDV 481
Query: 441 EHFTCLIDLLGRAGKLLEA 459
+ L++L R G++ EA
Sbjct: 482 SIWNALVNLYARCGRIREA 500
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 182/360 (50%), Gaps = 3/360 (0%)
Query: 103 FASAISACAGI-QSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA 161
FA A+ AC G + +IHA ++ G VGN LI +Y K G A V+ E
Sbjct: 44 FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL 103
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
+ VS+ A+++G+ +N E+ +++ M R G++P + + L C+ + +G
Sbjct: 104 SARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGR 163
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
++H K S FVGN ++ LY + AE+ F + +D +++NT I+ + C
Sbjct: 164 LIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCG 223
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
E L +F+EM G+ PD T +S+LAACA L +Q G Q+H++L + ++ D +
Sbjct: 224 HGEHALEIFEEMQFS-GLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIME 282
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
+L+++Y KCG + + +FN NVV WN ++ A + +LF QM+A GI+
Sbjct: 283 GSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIR 342
Query: 402 PDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
P+ T+ +L C + GE +S+ G D+ LID+ + G L +A
Sbjct: 343 PNQFTYPCILRTCTCTREIDLGEQ-IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARR 401
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 151/296 (51%), Gaps = 9/296 (3%)
Query: 168 SFNALIAGFVENQQPEKGFEVFKLMLRQ--GLLPDRFSFAGGLEICSVSNDLRKGMI--L 223
S +AGF+ ++ P K +F RQ GL P FA L C N R ++ +
Sbjct: 8 SLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGP--LDFACALRACR-GNGRRWQVVPEI 64
Query: 224 HCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY 283
H V L VGN ++ LYSK L+ A + F + +D +SW ++ +
Sbjct: 65 HAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLG 124
Query: 284 EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA 343
E+ L ++++M + GV P + +S+L++C G+ IHA + ++ VGNA
Sbjct: 125 EEALGLYRQM-HRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNA 183
Query: 344 LVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPD 403
++ +Y +CG + ++F +M HR+ V++NT+I+ HA G AL++FE+M+ +G+ PD
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPD 243
Query: 404 SVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
VT LL AC G +++G + + K GIS D L+DL + G + A
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKA-GISSDYIMEGSLLDLYVKCGDVETA 298
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/574 (36%), Positives = 336/574 (58%), Gaps = 5/574 (0%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
SLL C+ +AL+QG +HA + ++G+ ++ V +L++Y KCG M A +VF+ + R
Sbjct: 311 SLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGR 370
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
N+VSW+AMI+G Q G A FF++M + PN F S + AC+ +L +G+QIH
Sbjct: 371 NVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIH 430
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+K GY + V +L+SMY K G DA V+ + N+V++NA+I +V++++ +
Sbjct: 431 DRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYD 490
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
F+ +L++G+ PD +F L +C + L G + L ++ ES+ + N ++
Sbjct: 491 NAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALV 550
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+++ + A F + E+DL+SWNT IA + + FK M + GV+PD
Sbjct: 551 SMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFK-MMQESGVKPDQ 609
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
TF +L ACA ++ G+++HA + L+ DV VG L++MY KCG I ++ +F+
Sbjct: 610 ITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHN 669
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
+ +NV SW ++I +A H G AL+LF QM+ G+KPD +TF+G L+AC HAGL+KEG
Sbjct: 670 LPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEG 729
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
+F SM K + I P +EH+ C++DL GRAG L EA E+ K + D + G LL AC+
Sbjct: 730 LHHFESM-KDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQ 788
Query: 484 LRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSY 543
+ DV + E++A++ L P YV+LSN+YA+ GMW +V RK++ D G+ K+P
Sbjct: 789 VHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQ 848
Query: 544 SMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
S IEV G F + +H +I EI+ L L +
Sbjct: 849 SWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHM 882
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/463 (30%), Positives = 249/463 (53%), Gaps = 5/463 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L+ C+ K + +G L + +L G D+ V ++N++ KCG + A KVF+ + R+
Sbjct: 211 MLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRD 270
Query: 68 LVSWSAMISG---HHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHA 124
L++W++MI+G H Q + + + + P++ F S + AC ++L +G+++HA
Sbjct: 271 LITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHA 330
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ G + +VG +L+SMY K G DAL V+ N+VS+ A+IAGF ++ + E+
Sbjct: 331 RMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEE 390
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
F F M+ G+ P+R +F L CS + L++G +H +K ++ V +++
Sbjct: 391 AFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLS 450
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y+K + +A F I ++++++WN I A Y+ ++ F+ + + G++PD
Sbjct: 451 MYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKE-GIKPDSS 509
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
TF SIL C +++ GK + + +IR D+ + NALV+M+ CG + + LFN+M
Sbjct: 510 TFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDM 569
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
R++VSWNTIIA H A F+ M+ +G+KPD +TF GLL AC + EG
Sbjct: 570 PERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGR 629
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+++ + D+ T LI + + G + +A P
Sbjct: 630 R-LHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLP 671
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 140/482 (29%), Positives = 262/482 (54%), Gaps = 6/482 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++ SSLL C K K L G +H + IQPD+ + N ++++YAKCG A+++FDE
Sbjct: 105 QTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDE 164
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
M ++++ SW+ ++ G+ Q + A QM + P++Y F ++ACA +++ KG
Sbjct: 165 MPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKG 224
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
++ + L G+ + FVG +LI+M++K G DAL V+ +L+++ ++I G +
Sbjct: 225 GELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARH 284
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+Q ++ +F++M +G+ PD+ +F L+ C+ L +G +H + L++ +VG
Sbjct: 285 RQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVG 344
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++++Y+K + +A + F L++ ++++SW IA + E+ F +M + G+
Sbjct: 345 TALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMI-ESGI 403
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
P+ TF SIL AC+ ++++ G+QIH +I+ D V AL++MYAKCG + +
Sbjct: 404 EPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARN 463
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F + +NVV+WN +I A+ H +A+ F+ + GIKPDS TF +L C
Sbjct: 464 VFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDA 523
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
++ G+ + S+ G D+ L+ + G L+ A P +D + T++
Sbjct: 524 LELGK-WVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMP-ERDLVSWNTII 581
Query: 480 SA 481
+
Sbjct: 582 AG 583
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 143/261 (54%), Gaps = 2/261 (0%)
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
R +++ L++C +L G +H K++ + F+ N ++++Y+K A++ F
Sbjct: 104 RQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFD 163
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ +KD+ SWN + YE+ + ++M D GV+PD +TF +L ACA +V
Sbjct: 164 EMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQD-GVKPDKYTFVYMLNACADAKNVD 222
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G ++ + ++ + D+ VG AL+NM+ KCG + + K+FN + R++++W ++I A
Sbjct: 223 KGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLA 282
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
HR A LF+ M+ G++PD V F+ LL ACNH +++G+ M K G+ +I
Sbjct: 283 RHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARM-KEVGLDTEI 341
Query: 441 EHFTCLIDLLGRAGKLLEAEE 461
T L+ + + G + +A E
Sbjct: 342 YVGTALLSMYTKCGSMEDALE 362
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 181/374 (48%), Gaps = 43/374 (11%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ + +S+L+ C AL+ G + + +++ G + D+ + N +++++ CG ++ A +F+
Sbjct: 508 SSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFN 567
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
+M ER+LVSW+ +I+G Q GE+ A ++F M + P++ F ++ACA ++L +
Sbjct: 568 DMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTE 627
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+++HA + VG LISMY K G DA LV+ + N+ S+ ++I G+ +
Sbjct: 628 GRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQ 687
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ + ++ E+F M ++G+ PD +F G L C+ + +++G LH P +
Sbjct: 688 HGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEG--LHHFESMKDFNIEPRM 745
Query: 239 GN--TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
+ ++ L+ + L+ EA E N
Sbjct: 746 EHYGCMVDLFGRAGLLHEA-----------------------------------VEFINK 770
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
V+PD + ++L AC V+ +++ + + N D GV L N+YA G+
Sbjct: 771 MQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDD-GVYVILSNIYAAAGMWKE 829
Query: 357 SYKLFNEMLHRNVV 370
K+ ML R VV
Sbjct: 830 VTKMRKVMLDRGVV 843
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/560 (36%), Positives = 337/560 (60%), Gaps = 4/560 (0%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G +H VLK+G + + +++ Y+ G + +AR+VFDE+S +++VSW+ MI+ + +
Sbjct: 65 GRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAE 124
Query: 81 AGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
ALEFFSQM + PN + FA + AC G+Q+ G+ +H LK Y +V
Sbjct: 125 NDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYV 184
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
G L+ +Y + G + DA +G+ + +++ ++ +I+ F ++ Q EK E+F M R +
Sbjct: 185 GVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFV 244
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
+P++F+F+ L+ + L +H +K L ++ FV N +MA Y+K I ++ +
Sbjct: 245 IPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSME 304
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F + +++ +SWNT I + D E+ LS+F M + V+ + T++SIL ACA LA
Sbjct: 305 LFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLR-YQVQATEVTYSSILRACATLA 363
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
+++ G Q+H + QDV VGNAL++MYAKCG I + +F+ + R+ VSWN II
Sbjct: 364 ALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIIC 423
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
++ H LG A+K+F MK T KPD +TF+G+L+AC++ G + EG+ YF SM++ YGI
Sbjct: 424 GYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIE 483
Query: 438 PDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQ 497
P +EH+TC++ L+GR+G L +A ++ + P ++ LL AC + DV +G A++
Sbjct: 484 PCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRISAQR 543
Query: 498 LFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTV 557
+ L+P + +VLLSN+YA WG+VA RK +K G+KKEP S IE QG FTV
Sbjct: 544 VLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCFTV 603
Query: 558 AEFSHSKIGEINYMLKTLSL 577
A+ SH+ + IN ML+ L++
Sbjct: 604 ADTSHADLKLINGMLEFLNM 623
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 133/406 (32%), Positives = 211/406 (51%), Gaps = 7/406 (1%)
Query: 59 VFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNE---YIFASAISACAGIQS 115
VFDEM ERN VS+ +I G+ Q+ + + A E F+++H +E ++F + + ++
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
G+ +H LK GY S +F+G +LI Y G S A V+ E ++VS+ +IA
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+ EN + E F M G P+ F+FAG L+ C + G +HC +K E +
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
+VG ++ LY++ +A +AF + + D+I W+ I+ + EK L +F +M
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRR 241
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
V P+ FTF+S+L A A + S+ K IH H ++ L+ DV V NAL+ YAKCG I
Sbjct: 242 AF-VIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIE 300
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
S +LF + RN VSWNTII ++ G AL LF M ++ VT+ +L AC
Sbjct: 301 QSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACA 360
Query: 416 HAGLVKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
++ G + + + + YG D+ LID+ + G + +A
Sbjct: 361 TLAALELGLQVHCLTAKTIYG--QDVAVGNALIDMYAKCGSIKDAR 404
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 201/404 (49%), Gaps = 20/404 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + +L C + G ++H +VLK + D+ V +L LY +CG A + F +M
Sbjct: 149 TFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDM 208
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+ +++ WS MIS Q+G+ ALE F QM ++PN++ F+S + A A I+SL +
Sbjct: 209 PKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSK 268
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IH ++LK G ++ FV N+L++ Y K G ++ ++ + N VS+N +I +V+
Sbjct: 269 TIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLG 328
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E+ +F MLR + +++ L C+ L G+ +HCLT K + VGN
Sbjct: 329 DGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGN 388
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y+K I +A F +++ +D +SWN I S + + +F M + +
Sbjct: 389 ALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLM-KETKCK 447
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG------NALVNMYAKCGLI 354
PD+ TF +L+AC+ + GKQ + QD G+ +V + + G +
Sbjct: 448 PDELTFVGVLSACSNTGRLDEGKQYFTS-----MKQDYGIEPCMEHYTCMVWLMGRSGNL 502
Query: 355 SCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGG-SALKLFE 393
+ K ++ +V+ W ++ A H + LG SA ++ E
Sbjct: 503 DQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVLE 546
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 132/258 (51%), Gaps = 1/258 (0%)
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN 215
+V+ E E N VSF LI G+ ++ + + FE+F + +G + F F L++
Sbjct: 1 MVFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSME 60
Query: 216 DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIA 275
G I+H +K SN F+G ++ YS + A + F I KD++SW IA
Sbjct: 61 WAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIA 120
Query: 276 ACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN 335
+ + + + L F +M G +P++FTFA +L AC GL + GK +H +++
Sbjct: 121 SYAENDCFSEALEFFSQMRV-AGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYE 179
Query: 336 QDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM 395
+D+ VG L+ +Y +CG +++ F +M +V+ W+ +I+ A AL++F QM
Sbjct: 180 RDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQM 239
Query: 396 KATGIKPDSVTFIGLLTA 413
+ + P+ TF +L A
Sbjct: 240 RRAFVIPNQFTFSSVLQA 257
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/568 (37%), Positives = 330/568 (58%), Gaps = 4/568 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S C+ A + G LHA LK D IV L++YAKC +M+ ARKVF+
Sbjct: 273 TFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTF 332
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
S +A+I G+ + + L ALE F + +L +E + A++AC+ I+ ++G
Sbjct: 333 PNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGI 392
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H ++K G V N+++ MY K G +A L++ + + VS+NA+IA +N+
Sbjct: 393 QLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNE 452
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E+ +F MLR + PD ++F ++ C+ L GM +H +K + + FVG+
Sbjct: 453 HVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGS 512
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
I+ +Y K ++ EAEK +EE+ +SWN+ I+ S E LS F M GV
Sbjct: 513 AIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQ-VGVI 571
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD+FT+A++L CA LA+V+ GKQIH +++++L+ DV + + +V+MY+KCG + S +
Sbjct: 572 PDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIM 631
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F + R+ V+W+ +I A+A H LG A+KLFE+M+ +KP+ FI +L AC H G V
Sbjct: 632 FEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFV 691
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+G YF M YG+ P +EH++C++DLLGR+G++ EA E + P D ++ TLL
Sbjct: 692 DKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLG 751
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
CRL+ +V + E+ A L L P +S YVLLSN+YA GMWG+VA R +K+ LKKE
Sbjct: 752 ICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKE 811
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
P S I+V+ F V + +H + EI
Sbjct: 812 PGCSWIQVRDEVHAFLVGDKAHPRSEEI 839
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 137/497 (27%), Positives = 237/497 (47%), Gaps = 36/497 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKC------------- 50
+ S + CS KA+ G HA + G P V VSN +L Y KC
Sbjct: 40 TFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKM 99
Query: 51 ------------------GKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFS 92
G M A+ +FD M ER++VSW++M+S + Q G H ++E F+
Sbjct: 100 PQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFT 159
Query: 93 QMHLLPNEY---IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
+M LL ++ FA + AC GI+ G Q+H +++ G+ S G +L+ MY
Sbjct: 160 KMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCK 219
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
A ++ E E N V ++A+IAG+V N + +G +++K+ML +G+ + +FA
Sbjct: 220 KLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFR 279
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
C+ + G LH +K + VG + +Y+K + + +A K F S
Sbjct: 280 SCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQS 339
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
N I + + L +F+ + + + D+ + + L AC+ + G Q+H
Sbjct: 340 HNALIVGYARQDQVLEALEIFRSLQKSY-LDFDEISLSGALTACSAIKGYLEGIQLHGLA 398
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
++ L+ ++ V N +++MYAKCG + + +F++M ++ VSWN IIAAH + L
Sbjct: 399 VKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETL 458
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
LF M + ++PD TF ++ AC + G + K+ G+ D + +ID+
Sbjct: 459 ALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKS-GMGLDWFVGSAIIDM 517
Query: 450 LGRAGKLLEAEEYTKKF 466
+ G L+EAE+ ++
Sbjct: 518 YCKCGMLVEAEKIHERL 534
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/576 (37%), Positives = 325/576 (56%), Gaps = 4/576 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I+SLL C+ L +G LH+ +LK G+ PD I+ +L+LY KCG ++ A ++F
Sbjct: 246 TIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSG 305
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
N+V W+ M+ + Q + + + F QM + PNE+ + + C + G+
Sbjct: 306 DRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGE 365
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH S+K G+ S +V LI MY K G+ A + ++VS+ ++IAG+V+++
Sbjct: 366 QIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHE 425
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
++ E FK M G+ PD A + C+ +R+G +H ++ + N
Sbjct: 426 FCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWN 485
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ LY++ EA F IE KD I+WN ++ + YE+ L VF +M GV+
Sbjct: 486 ALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQA-GVK 544
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ FTF S ++A A LA ++ GKQIHA +I+ + V NAL+++Y KCG I +
Sbjct: 545 YNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQ 604
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F EM RN VSWNTII + + H G AL LF+QMK G+KP+ VTFIG+L AC+H GLV
Sbjct: 605 FFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLV 664
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+EG YF SM +GI P +H+ C++D+LGRAG+L A ++ ++ P+ + +V TLLS
Sbjct: 665 EEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLS 724
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ +++ IGE AK L L+P ++ YVLLSN YA G W RKM+KD G++KE
Sbjct: 725 ACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKE 784
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
P S IEV+ F V + H +I L L
Sbjct: 785 PGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLD 820
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/482 (30%), Positives = 270/482 (56%), Gaps = 8/482 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+SS+L C+K +QG +HA V K G + +V N ++ LY + G + LA +VF EM
Sbjct: 146 LSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMP 205
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQ 121
+ V+++ +IS H Q G ALE F +M L P+ AS ++ACA I L KG+Q
Sbjct: 206 YCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQ 265
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H+Y LK G + + SL+ +Y+K G +AL ++ N+V +N ++ + +
Sbjct: 266 LHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISD 325
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
K F++F M+ G+ P+ F++ L C+ + ++ G +H L++K ES+ +V
Sbjct: 326 LAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGV 385
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +YSK+ + +A + ++E KD++SW + IA ++ L FK+M G+ P
Sbjct: 386 LIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDM-QLFGIWP 444
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D+ AS ++ACAG+ +++ G+QIH+ + + DV + NALVN+YA+CG ++ LF
Sbjct: 445 DNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLF 504
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ H++ ++WN +++ A L AL++F +M G+K + TF+ ++A + +K
Sbjct: 505 EAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIK 564
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQ-DPIVLGTLLS 480
+G+ ++ KT G + + E LI L G+ G + +A+ + F + + + + T+++
Sbjct: 565 QGKQIHATVIKT-GCTSETEVANALISLYGKCGSIEDAK--MQFFEMSERNHVSWNTIIT 621
Query: 481 AC 482
+C
Sbjct: 622 SC 623
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 136/439 (30%), Positives = 232/439 (52%), Gaps = 5/439 (1%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+HA + G+ D I N +++LYAK G + AR+VF+++S R+ VSW AM+SG+ + G
Sbjct: 64 IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123
Query: 84 HLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
A+ + QMH ++P Y+ +S +SAC +G+ +HA K G S + VGN+
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
LI++Y++ G S A V+ E + V+FN LI+ + E E+F+ M G PD
Sbjct: 184 LIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPD 243
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+ A L C+ DL KG LH +K + + + +++ LY K +I EA + F+
Sbjct: 244 CVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFK 303
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ +++ WN + A +D K +F +M GVRP++FT+ +L C +
Sbjct: 304 SGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAA-GVRPNEFTYPCLLRTCTYAGEIN 362
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G+QIH I+ D+ V L++MY+K G + + ++ + ++VVSW ++IA +
Sbjct: 363 LGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYV 422
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
H AL+ F+ M+ GI PD++ ++AC +++G+ +S G S D+
Sbjct: 423 QHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQ-IHSRVYVSGYSADV 481
Query: 441 EHFTCLIDLLGRAGKLLEA 459
+ L++L R G+ EA
Sbjct: 482 SIWNALVNLYARCGRSKEA 500
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 156/298 (52%), Gaps = 3/298 (1%)
Query: 168 SFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVS-NDLRKGMILHCL 226
S N + GF+ ++ PEK +F +RQ FA L C S ++H
Sbjct: 8 SLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPLVPVIHAK 67
Query: 227 TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKG 286
+ C L + GN ++ LY+K L+ A + F + +D +SW ++ + E+
Sbjct: 68 AITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEA 127
Query: 287 LSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVN 346
+ ++ +M + GV P + +S+L+AC A + G+ +HA + + + VGNAL+
Sbjct: 128 VGLYHQM-HCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIA 186
Query: 347 MYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVT 406
+Y + G +S + ++F+EM + + V++NT+I+ HA G SAL++FE+M+ +G PD VT
Sbjct: 187 LYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVT 246
Query: 407 FIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTK 464
LL AC G + +G+ + + K G+SPD L+DL + G ++EA E K
Sbjct: 247 IASLLAACASIGDLNKGKQLHSYLLKA-GMSPDYIIEGSLLDLYVKCGVIVEALEIFK 303
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/563 (38%), Positives = 328/563 (58%), Gaps = 15/563 (2%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGH-- 78
G S+HA V K G + D+++SN + +Y K + + F M NL S + ++SG
Sbjct: 109 GESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCD 168
Query: 79 ----HQAGEHLLAL--EFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYA 132
Q L+ L E F PN Y F S + CA L +G+ IH +K G
Sbjct: 169 TETCDQGPRILIQLLVEGFE-----PNMYTFISILKTCASKGDLNEGKAIHGQVIKSGIN 223
Query: 133 SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM 192
S + NSL+++Y K G ++ A V+GE E ++VS+ ALI GFV + G +F M
Sbjct: 224 PDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVA-EGYGSGLRIFNQM 282
Query: 193 LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI 252
L +G P+ ++F L CS +D+ G +H VK L+ N FVG ++ +Y+K +
Sbjct: 283 LAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFL 342
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
+AE F + ++DL +W +A + EK + F +M + GV+P++FT AS L+
Sbjct: 343 EDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQRE-GVKPNEFTLASSLSG 401
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
C+ +A++ G+Q+H+ I+ + D+ V +ALV+MYAKCG + + +F+ ++ R+ VSW
Sbjct: 402 CSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSW 461
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
NTII ++ H GG ALK FE M G PD VTFIG+L+AC+H GL++EG+ +FNS+ K
Sbjct: 462 NTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSK 521
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGE 492
YGI+P IEH+ C++D+LGRAGK E E + ++ L + ++ T+L AC++ ++ GE
Sbjct: 522 IYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGE 581
Query: 493 RLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTF 552
R A +LF L+P S Y+LLSN++A+ GMW DV R ++ G+KKEP S +EV G
Sbjct: 582 RAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQV 641
Query: 553 EKFTVAEFSHSKIGEINYMLKTL 575
F + SH KI EI+ L+ L
Sbjct: 642 HVFLSHDGSHPKIREIHLKLQDL 664
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/436 (30%), Positives = 230/436 (52%), Gaps = 6/436 (1%)
Query: 28 VLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLA 87
V+K GI PD + + ++N+Y KC + AR+V +EM +++ W+ +S + A
Sbjct: 15 VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEA 74
Query: 88 LEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISM 144
++ F M + N++IFAS ISA A + G+ IHA K+G+ S + N+ ++M
Sbjct: 75 VQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTM 134
Query: 145 YMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSF 204
YMK + + NL S N L++GF + + ++G + +L +G P+ ++F
Sbjct: 135 YMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTF 194
Query: 205 AGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE 264
L+ C+ DL +G +H +K + + + N+++ +Y+K A K F I E
Sbjct: 195 ISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 254
Query: 265 KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ 324
+D++SW I Y GL +F +M + G P+ +TF SIL +C+ L+ V GKQ
Sbjct: 255 RDVVSWTALITGFV-AEGYGSGLRIFNQMLAE-GFNPNMYTFISILRSCSSLSDVDLGKQ 312
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
+HA +++ L+ + VG ALV+MYAK + + +FN ++ R++ +W I+A +A
Sbjct: 313 VHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQ 372
Query: 385 GGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFT 444
G A+K F QM+ G+KP+ T L+ C+ + G +SM G S D+ +
Sbjct: 373 GEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQ-LHSMAIKAGQSGDMFVAS 431
Query: 445 CLIDLLGRAGKLLEAE 460
L+D+ + G + +AE
Sbjct: 432 ALVDMYAKCGCVEDAE 447
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 126/396 (31%), Positives = 206/396 (52%), Gaps = 11/396 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C+ L +G ++H V+K GI PD + N ++N+YAKCG A KVF E+ ER
Sbjct: 196 SILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPER 255
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
++VSW+A+I+G G + L F+QM PN Y F S + +C+ + + G+Q+H
Sbjct: 256 DVVSWTALITGFVAEG-YGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVH 314
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A +K FVG +L+ MY K + DA ++ + +L ++ ++AG+ ++ Q E
Sbjct: 315 AQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGE 374
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
K + F M R+G+ P+ F+ A L CS L G LH + +K + FV + ++
Sbjct: 375 KAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALV 434
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K + +AE F + +D +SWNT I S K L F+ M D G PD+
Sbjct: 435 DMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAML-DEGTVPDE 493
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCSYKLFN 362
TF +L+AC+ + ++ GK+ L ++ + + +V++ + G
Sbjct: 494 VTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIE 553
Query: 363 EM-LHRNVVSWNTIIAA---HANHRLG-GSALKLFE 393
EM L NV+ W T++ A H N G +A+KLFE
Sbjct: 554 EMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFE 589
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 3/121 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++S L CS+ L G LH+ +K G D+ V++ ++++YAKCG + A VFD +
Sbjct: 394 TLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGL 453
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
R+ VSW+ +I G+ Q G+ AL+ F M +P+E F +SAC+ + + +G+
Sbjct: 454 VSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGK 513
Query: 121 Q 121
+
Sbjct: 514 K 514
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Query: 323 KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH 382
K+I +I+ + D + ++LVN+Y KC + C+ ++ EM ++V WN +++ +
Sbjct: 9 KKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSP 68
Query: 383 RLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
A++LF M+ T I+ + F L++A G GE+ + K YG DI
Sbjct: 69 YPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCK-YGFESDI 125
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/567 (37%), Positives = 334/567 (58%), Gaps = 5/567 (0%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + S+L CS + G +H V+K G DV+V + + +YAKC A K+FD
Sbjct: 298 AFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFD 357
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVK 118
EM ER++ SW+ +IS ++Q G+ ALE F +M + P+ + IS+CA + L +
Sbjct: 358 EMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLER 417
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G++IH ++ G+A FV ++L+ MY K G A V+ + N+VS+N++IAG+
Sbjct: 418 GKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSL 477
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ E+F+ M +G+ P + + L CS S +L+ G +H ++ ++E++ FV
Sbjct: 478 KGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFV 537
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++++ LY K IG AE F+ + + +++SWN I+ Y + L +F +M G
Sbjct: 538 NSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRK-AG 596
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
V+PD TF S+L AC+ LA ++ GK+IH +I +L + V AL++MYAKCG + +
Sbjct: 597 VKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEAL 656
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+FN++ R+ VSW ++IAA+ +H ALKLFE+M+ + KPD VTF+ +L+AC+HAG
Sbjct: 657 HIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAG 716
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP-LGQDPIVLGT 477
LV EG YFN M YG P +EH++CLIDLLGR G+L EA E ++ P + +D +L T
Sbjct: 717 LVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLST 776
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
L SAC L + + +GE++ + L P S Y++LSN+YAS W +V R +K+ GL
Sbjct: 777 LFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGL 836
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSK 564
KK P S IEV F V + SH +
Sbjct: 837 KKNPGCSWIEVGKRIHPFVVEDKSHPQ 863
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 242/453 (53%), Gaps = 9/453 (1%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER-NLVSWSAMISGHH 79
G +H ++ +G+Q ++ + ++NLY C A+ VF + ++ W+ +++
Sbjct: 214 GKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACT 273
Query: 80 QAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS 135
+ + LE F ++ +L P+ + + S + AC+G+ + G+ +H + +K G+A
Sbjct: 274 KNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDV 333
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
V +S + MY K DA+ ++ E E ++ S+N +I+ + ++ QPEK E+F+ M
Sbjct: 334 VVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVS 393
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
G PD + + C+ DL +G +H V+ + FV + ++ +Y K + A
Sbjct: 394 GFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMA 453
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
++ F I+ K+++SWN+ IA S D + + +F+ M ++ G+RP T +SIL AC+
Sbjct: 454 KEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRM-DEEGIRPTLTTLSSILMACSR 512
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
++Q GK IH ++IR R+ D+ V ++L+++Y KCG I + +F M NVVSWN +
Sbjct: 513 SVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVM 572
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN-SMEKTY 434
I+ + AL +F M+ G+KPD++TF +L AC+ ++++G+ N +E
Sbjct: 573 ISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKL 632
Query: 435 GISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
I+ + L+D+ + G + EA + P
Sbjct: 633 EINEVV--MGALLDMYAKCGAVDEALHIFNQLP 663
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/574 (36%), Positives = 333/574 (58%), Gaps = 5/574 (0%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+SS+L CS + L+ G +HA VL+ G + DV V N +++ Y KC ++ RK+FD+M
Sbjct: 141 VSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMV 200
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQ 121
+N++SW+ MISG+ Q A++ F +M+ L P+ + S +++C +++L +G+Q
Sbjct: 201 VKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQ 260
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+HAY++K S FV N LI MY K DA V+ E N++S+NA+I G+ ++
Sbjct: 261 VHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEK 320
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ E+F M + P +F L + + L +H L +K + + F G+
Sbjct: 321 LSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSA 380
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +YSK + + +A F + EKD++ WN + + E+ L ++ + +P
Sbjct: 381 LIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQ-KP 439
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
++FTFA+++ A + LAS++HG+Q H L++M L+ V NALV+MYAKCG I + K+F
Sbjct: 440 NEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMF 499
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
N + R+VV WN++I+ HA H AL +F +M GI+P+ VTF+ +L+AC+HAG V+
Sbjct: 500 NSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVE 559
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+G +FNSM +GI P EH+ C++ LLGR+GKL EA+E+ +K P+ IV +LLSA
Sbjct: 560 DGLNHFNSM-PGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSA 618
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
CR+ +V +G+ A+ P + Y+LLSN++AS GMW DV R + S + KEP
Sbjct: 619 CRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEP 678
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S IEV F +H + I +L L
Sbjct: 679 GRSWIEVNNKVNVFIARXTTHREADMIGSVLDIL 712
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/464 (30%), Positives = 257/464 (55%), Gaps = 13/464 (2%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
++S++ C++ +++G LH V++ G DV V +++ Y+K G + +AR VFD++
Sbjct: 40 LASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBIEVARLVFDQLL 99
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
E+ V+W+ +I+G+ + G ++LE F+QM +++P+ Y+ +S +SAC+ ++ L G+Q
Sbjct: 100 EKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQ 159
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
IHAY L+ G V N LI Y K ++ + N++S+ +I+G+++N
Sbjct: 160 IHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSF 219
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ ++F M R G PD F+ L C L +G +H T+K LESN FV N
Sbjct: 220 DWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNG 279
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR- 300
++ +Y+K NL+ +A+K F ++ E+++IS+N I S + L +F EM VR
Sbjct: 280 LIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMR----VRL 335
Query: 301 --PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
P TF S+L A L +++ KQIH +I+ ++ D+ G+AL+++Y+KC + +
Sbjct: 336 FPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDAR 395
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+F EM +++V WN + + H ALKL+ ++ + KP+ TF L+TA ++
Sbjct: 396 HVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLA 455
Query: 419 LVKEGEAYFNSMEKT-YGISPDIEHFTCLIDLLGRAGKLLEAEE 461
++ G+ + N + K P + + L+D+ + G + EA +
Sbjct: 456 SLRHGQQFHNQLVKMGLDFCPFVTN--ALVDMYAKCGSIEEARK 497
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 170/315 (53%), Gaps = 3/315 (0%)
Query: 98 PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV 157
PNE++ AS I AC + + KG Q+H + ++ G+ +VG SLI Y K G A LV
Sbjct: 35 PNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBIEVARLV 94
Query: 158 YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDL 217
+ + E V++ +IAG+ + + E+F M ++PDR+ + L CS+ L
Sbjct: 95 FDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFL 154
Query: 218 RKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA- 276
G +H ++ E + V N ++ Y+K N + K F + K++ISW T I+
Sbjct: 155 EGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGY 214
Query: 277 CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
+ D+E + +F EM N G +PD F S+L +C L +++ G+Q+HA+ I+ L
Sbjct: 215 MQNSFDWE-AMKLFGEM-NRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLES 272
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
+ V N L++MYAK L+ + K+F+ M +NV+S+N +I +++ AL+LF +M+
Sbjct: 273 NEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMR 332
Query: 397 ATGIKPDSVTFIGLL 411
P +TF+ LL
Sbjct: 333 VRLFPPSLLTFVSLL 347
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 143/284 (50%), Gaps = 11/284 (3%)
Query: 183 EKGFEVF-KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
E+ VF L + G P+ F A + C+ + KG LH V+ + + +VG +
Sbjct: 18 EEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTS 77
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ YSK I A F + EK ++W T IA + C L +F +M + V P
Sbjct: 78 LIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQM-RETNVVP 136
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D + +S+L+AC+ L ++ GKQIHA+++R DV V N L++ Y KC + KLF
Sbjct: 137 DRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLF 196
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
++M+ +N++SW T+I+ + + A+KLF +M G KPD +LT+C ++
Sbjct: 197 DQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALE 256
Query: 422 EGEAYFNSMEKTYGISPDIEHF----TCLIDLLGRAGKLLEAEE 461
+G Y I ++E LID+ ++ L +A++
Sbjct: 257 QGRQV-----HAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKK 295
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++L+ S +L+ G H ++KMG+ V+N ++++YAKCG + ARK+F+
Sbjct: 443 TFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSS 502
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
R++V W++MIS H Q GE AL F +M + PN F + +SAC+
Sbjct: 503 IWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACS 553
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/573 (35%), Positives = 330/573 (57%), Gaps = 4/573 (0%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C+ + A G +H +L+ GI+ + ++N ++N+Y +CG ++ A+ VF+ R+
Sbjct: 437 LLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARD 496
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
++SW++MI+GH Q G + A + F +M L P+ FAS +S C ++L G+QIH
Sbjct: 497 VISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHG 556
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ G +GN+LI+MY++ G DA V+ +++S+ A+I G + + K
Sbjct: 557 RITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMK 616
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
E+F M +G P + +F+ L++C+ S L +G + + E + VGN +++
Sbjct: 617 AIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALIS 676
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
YSK + +A + F + +D++SWN IA + + + +M + V P+ F
Sbjct: 677 AYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQM-QEQDVVPNKF 735
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
+F S+L AC+ ++++ GK++HA +++ +L DV VG AL++MYAKCG + ++F+ +
Sbjct: 736 SFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNI 795
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+ +NVV+WN +I A+A H L AL F M+ GIKPD TF +L+ACNHAGLV EG
Sbjct: 796 IEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGY 855
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRL 484
F+SME YG+ P IEH+ CL+ LLGRA + EAE + P D V TLL ACR+
Sbjct: 856 QIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRI 915
Query: 485 RRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYS 544
++ + E A L + Y+LLSN+YA+ G W DVA R++++ G++KEP S
Sbjct: 916 HGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRS 975
Query: 545 MIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
IEV +F A+ SH + EI LK LS+
Sbjct: 976 WIEVDNIIHEFIAADRSHPETAEIYAELKRLSV 1008
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/457 (30%), Positives = 260/457 (56%), Gaps = 5/457 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+LL +C++ + L + +HA +++ + PD+ +SN ++N+Y KC ++ A +VF EM R
Sbjct: 32 ALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRR 91
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
+++SW+++IS + Q G A + F +M +PN+ + S ++AC L G++IH
Sbjct: 92 DVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIH 151
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ +K GY V NSL+SMY K G A V+ ++VS+N ++ + + +
Sbjct: 152 SQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVK 211
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ +F M +G+ PD+ ++ L+ + + L +G +H LTV+ L S+ VG ++
Sbjct: 212 ECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALV 271
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+ + + A++AF+ ++D++ +N IAA + + + M +D GV +
Sbjct: 272 TMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSD-GVALNR 330
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T+ SIL AC+ +++ GK IH+H+ + DV +GNAL++MYA+CG + + +LF
Sbjct: 331 TTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYT 390
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M R+++SWN IIA +A G A++L++QM++ G+KP VTF+ LL+AC ++ +G
Sbjct: 391 MPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADG 450
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
+ + ++ GI + L+++ R G L+EA+
Sbjct: 451 KMIHEDILRS-GIKSNGHLANALMNMYRRCGSLMEAQ 486
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 134/464 (28%), Positives = 248/464 (53%), Gaps = 5/464 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+LL + L +G +H ++ G+ D+ V ++ + +CG + A++ F ++R
Sbjct: 234 NLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADR 293
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
++V ++A+I+ Q G ++ A E + +M + N + S ++AC+ ++L G+ IH
Sbjct: 294 DVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIH 353
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
++ + G++S +GN+LISMY + G A ++ + +L+S+NA+IAG+ +
Sbjct: 354 SHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRG 413
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ ++K M +G+ P R +F L C+ S+ G ++H ++ ++SN + N +M
Sbjct: 414 EAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALM 473
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y + + EA+ F + +D+ISWN+ IA + YE +F+EM N+ + PD+
Sbjct: 474 NMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEE-LEPDN 532
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
TFAS+L+ C +++ GKQIH + L DV +GNAL+NMY +CG + + +F+
Sbjct: 533 ITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHS 592
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
+ HR+V+SW +I A+ A++LF QM+ G +P TF +L C + + EG
Sbjct: 593 LQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEG 652
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+ + + G D LI ++G + +A E K P
Sbjct: 653 KKVIAYILNS-GYELDTGVGNALISAYSKSGSMTDAREVFDKMP 695
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 114/325 (35%), Positives = 180/325 (55%), Gaps = 4/325 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L C +AL+ G +H + + G+Q DV + N ++N+Y +CG + AR VF +
Sbjct: 534 TFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSL 593
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
R+++SW+AMI G GE + A+E F QM P + F+S + C L +G+
Sbjct: 594 QHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGK 653
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++ AY L GY + VGN+LIS Y K G +DA V+ + ++VS+N +IAG+ +N
Sbjct: 654 KVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNG 713
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ E M Q ++P++FSF L CS + L +G +H VK KL+ + VG
Sbjct: 714 LGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGA 773
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++++Y+K GEA++ F I EK++++WN I A + K L F M + G++
Sbjct: 774 ALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKE-GIK 832
Query: 301 PDDFTFASILAACAGLASVQHGKQI 325
PD TF SIL+AC V G QI
Sbjct: 833 PDGSTFTSILSACNHAGLVLEGYQI 857
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 204/396 (51%), Gaps = 3/396 (0%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+ + + C + L + ++IHA ++ F+ N LI+MY+K DA V+ E
Sbjct: 30 YVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMP 89
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
+++S+N+LI+ + + +K F++F+ M G +P++ ++ L C +L G
Sbjct: 90 RRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKK 149
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
+H +K + +P V N+++++Y K + A + F I +D++S+NT + + A
Sbjct: 150 IHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAY 209
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
++ L +F +MS++ G+ PD T+ ++L A + + GK+IH + LN D+ VG
Sbjct: 210 VKECLGLFGQMSSE-GISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGT 268
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
ALV M +CG + + + F R+VV +N +IAA A H A + + +M++ G+
Sbjct: 269 ALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVAL 328
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
+ T++ +L AC+ + ++ G+ + + + G S D++ LI + R G L +A E
Sbjct: 329 NRTTYLSILNACSTSKALEAGKLIHSHISED-GHSSDVQIGNALISMYARCGDLPKAREL 387
Query: 463 TKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQL 498
P +D I +++ R D RL KQ+
Sbjct: 388 FYTMP-KRDLISWNAIIAGYARREDRGEAMRLYKQM 422
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 152/282 (53%), Gaps = 3/282 (1%)
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
+R ++ L+ C+ L + +H V+ + + F+ N ++ +Y K + +A + F
Sbjct: 26 ERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVF 85
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+ + +D+ISWN+ I+ + +K +F+EM N G P+ T+ SIL AC A +
Sbjct: 86 KEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQN-AGFIPNKITYISILTACYSPAEL 144
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
++GK+IH+ +I+ +D V N+L++MY KCG + + ++F + R+VVS+NT++ +
Sbjct: 145 ENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLY 204
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
A L LF QM + GI PD VT+I LL A ++ EG+ + + G++ D
Sbjct: 205 AQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKR-IHKLTVEEGLNSD 263
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
I T L+ + R G + A++ K +D +V L++A
Sbjct: 264 IRVGTALVTMCVRCGDVDSAKQAFKG-TADRDVVVYNALIAA 304
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/565 (37%), Positives = 337/565 (59%), Gaps = 10/565 (1%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G S+HA V K+G D V +++ Y+ CG AR+VFD + +++VSW+ M++ + +
Sbjct: 164 GFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVE 223
Query: 81 AGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
+L+ FS+M ++ PN + FAS + AC G++ G+ +H + K Y FV
Sbjct: 224 NECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFV 283
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
G LI +Y+K G DAL V+ E + +++ ++ +IA + +++Q E+ E+F M R +
Sbjct: 284 GVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLV 343
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
LP++F+ A L+ C+ DL+ G +HC VK L+ N FV N +M +Y+K G E
Sbjct: 344 LPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAK---CGRMEN 400
Query: 258 AFRLIEEK---DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA 314
+ +L E +SWNT I + EK L +FK+M + V+ + T++S+L ACA
Sbjct: 401 SLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDML-ECQVQGTEVTYSSVLRACA 459
Query: 315 GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNT 374
G+A+++ G QIH+ ++ +++ VGNAL++MYAKCG I + +F+ + + VSWN
Sbjct: 460 GIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNA 519
Query: 375 IIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTY 434
+I+ ++ H L G ALK FE M T KPD VTF+G+L+AC++AGL+ G+AYF SM + Y
Sbjct: 520 MISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEY 579
Query: 435 GISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERL 494
I P EH+TC++ LLGR+G L +A + + P +V LLSAC + DV +G
Sbjct: 580 DIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRIS 639
Query: 495 AKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEK 554
A+++ ++P + +VLLSN+YA+ WG+VA R +K G++KEP S IE QG
Sbjct: 640 AQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHY 699
Query: 555 FTVAEFSHSKIGEINYMLKTLSLAA 579
F+V + SH IN ML+ L++ A
Sbjct: 700 FSVGDTSHPDTKLINGMLEWLNMKA 724
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 144/459 (31%), Positives = 232/459 (50%), Gaps = 9/459 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
SLL C + G LH ++K G D+ +N +LN Y K + A K+FDEM +R
Sbjct: 49 SLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDR 108
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQI 122
N VS+ +I G+ Q A+ FS++ H L N ++F++ + + G +
Sbjct: 109 NTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHEL-NPFVFSTVLKLLVSAEWAKLGFSV 167
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
HA K G+ S +FVG +LI Y GY+ A V+ ++VS+ ++A +VEN+
Sbjct: 168 HACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECF 227
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E+ ++F M G P+ F+FA L+ C G +H K FVG +
Sbjct: 228 EESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVEL 287
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ LY K + +A + F + + D+I W+ IA + E+ + +F M V P+
Sbjct: 288 IDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGL-VLPN 346
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
FT AS+L ACA L +Q G QIH H++++ L+ +V V NAL++MYAKCG + S +LF+
Sbjct: 347 QFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFS 406
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
E + VSWNT+I + G AL LF+ M ++ VT+ +L AC ++
Sbjct: 407 ESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEP 466
Query: 423 GEAYFN-SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
G + S++ Y + + + LID+ + G + +A
Sbjct: 467 GSQIHSLSVKTIYDKNTVVGN--ALIDMYAKCGNIKDAR 503
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 200/402 (49%), Gaps = 16/402 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L C + G ++H K ++ V +++LY K G + A +VF+EM
Sbjct: 248 TFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEM 307
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+ +++ WS MI+ + Q+ + A+E F +M +LPN++ AS + ACA + L G
Sbjct: 308 PKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGN 367
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH + +K G FV N+L+ MY K G ++L ++ E+ VS+N +I G+V+
Sbjct: 368 QIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAG 427
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
EK +FK ML + +++ L C+ L G +H L+VK + N VGN
Sbjct: 428 NGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGN 487
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y+K I +A F ++ E D +SWN I+ S Y + L F+ M +
Sbjct: 488 ALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETE-CK 546
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG----NALVNMYAKCGLISC 356
PD TF IL+AC+ + G+ A+ M D+ +V + + G +
Sbjct: 547 PDKVTFVGILSACSNAGLLDRGQ---AYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDK 603
Query: 357 SYKLFNEM-LHRNVVSWNTIIAA---HANHRLGG-SALKLFE 393
+ KL +E+ +V+ W +++A H + LG SA ++ E
Sbjct: 604 AAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLE 645
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 171/358 (47%), Gaps = 2/358 (0%)
Query: 99 NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY 158
N YI+ S + +C G+ +H +K G F N L++ Y+K DA ++
Sbjct: 43 NTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLF 102
Query: 159 GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLR 218
E + N VSF LI G+ + + + +F + +G + F F+ L++ + +
Sbjct: 103 DEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAK 162
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
G +H K +S+ FVG ++ YS A + F IE KD++SW +A
Sbjct: 163 LGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYV 222
Query: 279 HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
+E+ L +F M G +P++FTFAS+L AC GL GK +H + +++
Sbjct: 223 ENECFEESLKLFSRM-RIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEEL 281
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
VG L+++Y K G + + ++F EM +V+ W+ +IA +A A+++F +M+
Sbjct: 282 FVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRG 341
Query: 399 GIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+ P+ T LL AC ++ G + K G+ ++ L+D+ + G++
Sbjct: 342 LVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKV-GLDMNVFVSNALMDMYAKCGRM 398
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/567 (37%), Positives = 334/567 (58%), Gaps = 5/567 (0%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + S+L CS + G +H V+K G DV+V + + +YAKC A K+FD
Sbjct: 106 AFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFD 165
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVK 118
EM ER++ SW+ +IS ++Q G+ ALE F +M + P+ + IS+CA + L +
Sbjct: 166 EMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLER 225
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G++IH ++ G+A FV ++L+ MY K G A V+ + N+VS+N++IAG+
Sbjct: 226 GKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSL 285
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ E+F+ M +G+ P + + L CS S +L+ G +H ++ ++E++ FV
Sbjct: 286 KGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFV 345
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++++ LY K IG AE F+ + + +++SWN I+ Y + L +F +M G
Sbjct: 346 NSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRK-AG 404
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
V+PD TF S+L AC+ LA ++ GK+IH +I +L + V AL++MYAKCG + +
Sbjct: 405 VKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEAL 464
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+FN++ R+ VSW ++IAA+ +H ALKLFE+M+ + KPD VTF+ +L+AC+HAG
Sbjct: 465 HIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAG 524
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP-LGQDPIVLGT 477
LV EG YFN M YG P +EH++CLIDLLGR G+L EA E ++ P + +D +L T
Sbjct: 525 LVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLST 584
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
L SAC L + + +GE++ + L P S Y++LSN+YAS W +V R +K+ GL
Sbjct: 585 LFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGL 644
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSK 564
KK P S IEV F V + SH +
Sbjct: 645 KKNPGCSWIEVGKRIHPFVVEDKSHPQ 671
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 135/467 (28%), Positives = 251/467 (53%), Gaps = 9/467 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
SLL C +K L+QG +H ++ +G+Q ++ + ++NLY C A+ VF +
Sbjct: 8 SLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENP 67
Query: 67 -NLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQ 121
++ W+ +++ + + LE F ++ +L P+ + + S + AC+G+ + G+
Sbjct: 68 LDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKM 127
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H + +K G+A V +S + MY K DA+ ++ E E ++ S+N +I+ + ++ Q
Sbjct: 128 VHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQ 187
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
PEK E+F+ M G PD + + C+ DL +G +H V+ + FV +
Sbjct: 188 PEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSA 247
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y K + A++ F I+ K+++SWN+ IA S D + + +F+ M ++ G+RP
Sbjct: 248 LVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRM-DEEGIRP 306
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
T +SIL AC+ ++Q GK IH ++IR R+ D+ V ++L+++Y KCG I + +F
Sbjct: 307 TLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVF 366
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
M NVVSWN +I+ + AL +F M+ G+KPD++TF +L AC+ +++
Sbjct: 367 QNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLE 426
Query: 422 EGEAYFN-SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+G+ N +E I+ + L+D+ + G + EA + P
Sbjct: 427 KGKEIHNFIIESKLEINEVV--MGALLDMYAKCGAVDEALHIFNQLP 471
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D S+L C ++ GK IH ++ + L ++ + +L+N+Y C L + +F
Sbjct: 2 DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF 61
Query: 362 NEMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQ-MKATGIKPDSVTFIGLLTACNHAGL 419
+ + ++ WN ++AA + + L++F + + +KPD+ T+ +L AC+ G
Sbjct: 62 QTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGR 121
Query: 420 VKEGE 424
V G+
Sbjct: 122 VGYGK 126
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/573 (36%), Positives = 332/573 (57%), Gaps = 4/573 (0%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+S+ C+ AL+ G LHA LK D+ V L++YAKCG + A+++F+ + +
Sbjct: 281 ASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPK 340
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFS---QMHLLPNEYIFASAISACAGIQSLVKGQQI 122
+L ++A+I G + + AL+FF + L NE + A SACA I+ + G+Q+
Sbjct: 341 HSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQL 400
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H+ S+K S V NS++ MY K S+A ++ E + VS+NA+IA +N
Sbjct: 401 HSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNE 460
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E+ +F MLR + PD+F++ L+ CS L GM +H +K L + FVG +
Sbjct: 461 EETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGAL 520
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y K +I EA+K IE++ ++SWN IA + E S F EM V+PD
Sbjct: 521 IDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLK-MSVKPD 579
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+FT+A +L ACA LASV GKQIH +I++ L+ DV + + LV+MY+KCG + S +F
Sbjct: 580 NFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFE 639
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+ +++ V+WN +I +A H LG AL FE+M+ ++P+ TF+ +L AC H G + +
Sbjct: 640 KAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDK 699
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G YFN+M YG+ P IEH++C+ID++GR+G++ EA + ++ P D ++ TLLS C
Sbjct: 700 GLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSIC 759
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
++ ++ I E+ + L+P +S +LLSN+YA GMWG V+ RKM++ + LKKEP
Sbjct: 760 KIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEPG 819
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S IEV+ F V +H + EI +L L
Sbjct: 820 CSWIEVKDEVHAFLVGNKTHPRYEEIYKILSVL 852
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/468 (32%), Positives = 255/468 (54%), Gaps = 7/468 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + +L CS + GI +H +++MG DV+ + +L++YAKC ++ + K+F E+
Sbjct: 178 TFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEI 237
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQ 120
+N V WSA+I+G Q EH+L LE F +M + ++ I+AS +CAG+ +L G
Sbjct: 238 PVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGT 297
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HA++LK + S VG + + MY K G +DA ++ + +L +NA+I G V N+
Sbjct: 298 QLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNE 357
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC-SVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ + + F+L+L+ GL + S +G C S+ DL G LH L+VK L SN V
Sbjct: 358 KGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDL-DGRQLHSLSVKSTLRSNICVA 416
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N+I+ +Y K + EA F +E +D +SWN IAA + E+ L++F M +
Sbjct: 417 NSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLR-M 475
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
PD FT+ S+L AC+ ++ G +IH +I+ L D VG AL++MY KCG+I + K
Sbjct: 476 EPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKK 535
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+ + + + +VSWN IIA + A F +M +KPD+ T+ +L AC +
Sbjct: 536 IHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLAS 595
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
V G+ + K + D+ + L+D+ + G + ++ +K P
Sbjct: 596 VGLGKQIHGQIIKL-ELHSDVYITSTLVDMYSKCGNMQDSALVFEKAP 642
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 138/496 (27%), Positives = 244/496 (49%), Gaps = 41/496 (8%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++ S ++ CS +L+ G HA ++ G PDV +SN ++ +Y +C + A KVF++
Sbjct: 44 RTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEK 103
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFF---------SQMHLLP--------------- 98
MS+R+++S++ MISG+ AGE LA EFF S +L
Sbjct: 104 MSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVF 163
Query: 99 -----------NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMK 147
++ FA + AC+ ++ G Q+H ++ G+ G++L+ MY K
Sbjct: 164 LDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAK 223
Query: 148 VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGG 207
D+L ++ E N V ++A+IAG V+N + G E+FK M + G+ + +A
Sbjct: 224 CKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASV 283
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDL 267
C+ + L+ G LH +KC S+ VG + +Y+K + +A++ F + + L
Sbjct: 284 FRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSL 343
Query: 268 ISWNTFIAACSHCADYEKGLSV--FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
+N I C EKG F ++ G+ ++ + + +ACA + G+Q+
Sbjct: 344 QCYNAIIVG---CVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQL 400
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
H+ ++ L ++ V N++++MY KC +S + +F+EM R+ VSWN +IAAH +
Sbjct: 401 HSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNE 460
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
L LF M ++PD T+ +L AC+ + G N + K+ G+ D
Sbjct: 461 EETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKS-GLGLDSFVGGA 519
Query: 446 LIDLLGRAGKLLEAEE 461
LID+ + G + EA++
Sbjct: 520 LIDMYCKCGMIEEAKK 535
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 203/401 (50%), Gaps = 9/401 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+S C+ K G LH+ +K ++ ++ V+N +L++Y KC + A +FDEM
Sbjct: 380 SLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEM 439
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
R+ VSW+A+I+ H Q G L F+ M + P+++ + S + AC+ Q+L G
Sbjct: 440 ERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGM 499
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+IH +K G SFVG +LI MY K G +A ++ + +VS+NA+IAGF +
Sbjct: 500 EIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLK 559
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E F ML+ + PD F++A L+ C+ + G +H +K +L S+ ++ +
Sbjct: 560 HSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITS 619
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
T++ +YSK + ++ F KD ++WN I + E+ L F+ M ++ VR
Sbjct: 620 TLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLEN-VR 678
Query: 301 PDDFTFASILAACAGLASVQHG-KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
P+ TF SIL ACA + + G +A L L + + ++++ + G IS + K
Sbjct: 679 PNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALK 738
Query: 360 LFNEM-LHRNVVSWNTIIA---AHANHRLGGSALKLFEQMK 396
L EM + V W T+++ H N + A Q++
Sbjct: 739 LIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLE 779
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 143/313 (45%), Gaps = 41/313 (13%)
Query: 191 LMLRQGLLPDRF-SFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF 249
L Q LP + +F+ ++ CS N L+ G H + + ++ N +M +Y +
Sbjct: 32 LQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRC 91
Query: 250 NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY-------------------------- 283
+ + A K F + ++D+IS+NT I+ + +
Sbjct: 92 SHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFL 151
Query: 284 -----EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
K + VF +M V D TFA +L AC+ L G Q+H ++RM +DV
Sbjct: 152 QNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDV 211
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA---HANHRLGGSALKLFEQM 395
G+AL++MYAKC + S K+F+E+ +N V W+ IIA + H LG L+LF++M
Sbjct: 212 VTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILG---LELFKEM 268
Query: 396 KATGIKPDSVTFIGLLTACNHAGLVKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
+ GI + + +C +K G + + ++++ +G DI T +D+ + G
Sbjct: 269 QKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFG--SDITVGTATLDMYAKCG 326
Query: 455 KLLEAEEYTKKFP 467
L +A+ P
Sbjct: 327 SLADAQRIFNSLP 339
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/643 (33%), Positives = 358/643 (55%), Gaps = 74/643 (11%)
Query: 6 SSLLHHCSKTKALQQGIS-LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+ LL C K+K + +HA+V+K G ++ + N +++ Y+KCG + R+VFD+M
Sbjct: 23 AKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMP 82
Query: 65 ERNL-------------------------------VSWSAMISGHHQAGEHLLALEFFSQ 93
+RN+ +W++M+SG Q AL +F+
Sbjct: 83 QRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAM 142
Query: 94 MH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGY 150
MH + NEY FAS +SAC+G+ + KG Q+H+ K + S ++G++L+ MY K G
Sbjct: 143 MHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGN 202
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
+DA V+ E + N+VS+N+LI F +N + +VF++ML + PD + A +
Sbjct: 203 VNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISA 262
Query: 211 CSVSNDLRKGMILHCLTVKC-KLESNPFVGNTIMALYSKFNLIGEAE------------- 256
C+ + ++ G +H VK KL ++ + N + +Y+K + I EA
Sbjct: 263 CASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIA 322
Query: 257 --------------KAFRLI----EEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
KA RL+ E++++SWN IA + + E+ LS+F + +
Sbjct: 323 ETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRE-S 381
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRL------NQDVGVGNALVNMYAKCG 352
V P ++FA+IL ACA LA + G Q H H+++ D+ VGN+L++MY KCG
Sbjct: 382 VCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCG 441
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
+ Y +F +M+ R+ VSWN +I A + G AL+LF +M +G KPD +T IG+L+
Sbjct: 442 CVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLS 501
Query: 413 ACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDP 472
AC HAG V+EG YF+SM + +G++P +H+TC++DLLGRAG L EA+ ++ P+ D
Sbjct: 502 ACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDS 561
Query: 473 IVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKML 532
++ G+LL+AC++ R++ +G+ +A++L ++P+ + PYVLLSN+YA G W DV RK +
Sbjct: 562 VIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSM 621
Query: 533 KDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ G+ K+P S I++QG F V + SH + +I+ +L L
Sbjct: 622 RKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDIL 664
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 211/428 (49%), Gaps = 54/428 (12%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S +S+L CS + +G+ +H+ + K DV + + ++++Y+KCG + A++VFDEM
Sbjct: 154 SFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEM 213
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+RN+VSW+++I+ Q G + AL+ F M + P+E AS ISACA + ++ GQ
Sbjct: 214 GDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQ 273
Query: 121 QIHAYSLKFG---------------YASISFVG-----------------NSLISMYMKV 148
++H +K YA S + S+IS Y
Sbjct: 274 EVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMA 333
Query: 149 GYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGL 208
+ A L++ + E N+VS+NALIAG+ +N + E+ +F L+ R+ + P +SFA L
Sbjct: 334 ASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANIL 393
Query: 209 EICSVSNDLRKGMILHCLTVKCKL------ESNPFVGNTIMALYSKFNLIGEAEKAFRLI 262
+ C+ +L GM H +K E + FVGN+++ +Y K + E FR +
Sbjct: 394 KACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM 453
Query: 263 EEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG 322
E+D +SWN I + + L +F+EM + G +PD T +L+AC V+ G
Sbjct: 454 MERDCVSWNAMIIGFAQNGYGNEALELFREML-ESGEKPDHITMIGVLSACGHAGFVEEG 512
Query: 323 KQIHAHLIRMRLNQDVGVG------NALVNMYAKCGLISCSYKLFNEM-LHRNVVSWNTI 375
+ + + R D GV +V++ + G + + + EM + + V W ++
Sbjct: 513 RHYFSSMTR-----DFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSL 567
Query: 376 IAAHANHR 383
+AA HR
Sbjct: 568 LAACKVHR 575
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/579 (37%), Positives = 342/579 (59%), Gaps = 10/579 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+SS+++ C+ + QG +H ++K+G D +N ++++YAK G + A VFDE+
Sbjct: 113 SLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEI 172
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
++ ++VSW+A+I+G H ALE +M+ + PN + +SA+ ACAG+ G+
Sbjct: 173 AKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGR 232
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H+ +K S SF+G LI MY K DA LV+ E +++++NA+I+G +N+
Sbjct: 233 QLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNE 292
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ E+ +F LM +G+ ++ + + L+ + +H L++K E + +V N
Sbjct: 293 EDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVN 352
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEK---DLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+++ Y K G E A R+ EE DL+ + + + A + E+ L ++ EM D
Sbjct: 353 SLIDTYGK---CGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEM-QDR 408
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G++PD F +S+L ACA L++ + GKQ+H H+++ D+ GN+LVNMYAKCG I +
Sbjct: 409 GIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDA 468
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
F+ + R +VSW+ +I A H G AL+LF+QM G+ P+ +T + +L ACNHA
Sbjct: 469 SCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHA 528
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV E + YFNSM+ +GI P EH+ C+IDLLGRAGKL A E K P + +V G
Sbjct: 529 GLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGA 588
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL A R+ +++ +GE+ A+ L L+P + +VLL+N+YAS GMW VA R+++KD +
Sbjct: 589 LLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKV 648
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
KKEP S +EV+ F V + SHS+ EI L LS
Sbjct: 649 KKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKLDELS 687
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 149/468 (31%), Positives = 257/468 (54%), Gaps = 5/468 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S+L C+ TK L G +H V+ G D V+N ++ LYAKCG AR +FD +
Sbjct: 12 AFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAI 71
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+R++VSW+A+ S + + H A+ F M L PNE+ +S I+ C G++ V+G+
Sbjct: 72 PDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGR 131
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+IH Y +K GY S +F N+L+ MY KVG DA V+ E +P++VS+NA+IAG V ++
Sbjct: 132 KIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHE 191
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ E+ + M + G+ P+ F+ + L+ C+ G LH +K + S+ F+G
Sbjct: 192 YHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGV 251
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +YSK N + +A F+L+ E+D+I+WN I+ S + E+ S+F M + G+
Sbjct: 252 GLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTE-GIG 310
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ T +++L + A L + +QIHA ++ D V N+L++ Y KCG + + ++
Sbjct: 311 FNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRV 370
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F E ++V + +++ A+A G AL+L+ +M+ GIKPDS LL AC
Sbjct: 371 FEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAY 430
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
++G+ + K +G DI L+++ + G + +A + P+
Sbjct: 431 EQGKQVHVHILK-FGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPV 477
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 207/402 (51%), Gaps = 28/402 (6%)
Query: 94 MHLLP---NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGY 150
MHLL NE+ F S + AC + LV G+Q+H + G+ S FV NSL+ +Y K G
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
DA ++ + ++VS+NAL + +V + + +F M+ G+ P+ FS + + +
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
C+ D +G +H +K +S+ F N ++ +Y+K ++ +A F I + D++SW
Sbjct: 121 CTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSW 180
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
N IA C + + L + +EM N G+ P+ FT +S L ACAG+A + G+Q+H+ LI
Sbjct: 181 NAIIAGCVLHEYHHRALELLREM-NKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLI 239
Query: 331 RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALK 390
+M + D +G L++MY+KC + + +F M R++++WN +I+ H+ + A
Sbjct: 240 KMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAAS 299
Query: 391 LFEQMKATGIKPDSVTFIGLLTA---------CN--HAGLVKEGEAYFNSMEKTYGISPD 439
LF M GI + T +L + C HA +K G + N + +
Sbjct: 300 LFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNS------ 353
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
LID G+ G + +A ++ P+ D ++ +L++A
Sbjct: 354 ------LIDTYGKCGHVEDATRVFEESPI-VDLVLFTSLVTA 388
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/576 (36%), Positives = 324/576 (56%), Gaps = 4/576 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++SLL C+ LQ+G LH+ +LK G+ D I +L+LY KCG + A +F+
Sbjct: 247 TVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLG 306
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
N+V W+ M+ + Q + + E F QM + PN++ + + C + G+
Sbjct: 307 DRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGE 366
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH+ S+K G+ S +V LI MY K G A + + ++VS+ ++IAG+V++
Sbjct: 367 QIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHD 426
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E+ FK M G+ PD A C+ +R+G+ +H ++ + N
Sbjct: 427 FCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWN 486
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
T++ LY++ EA FR IE KD I+WN I+ Y++ L VF +M G +
Sbjct: 487 TLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQ-AGAK 545
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ FTF S ++A A LA ++ GKQ+H ++ + V NAL+++Y KCG I + +
Sbjct: 546 YNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMI 605
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+EM RN VSWNTII + + H G AL LF+QMK G+KP+ VTFIG+L AC+H GLV
Sbjct: 606 FSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLV 665
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+EG +YF SM YG++P +H+ C++D+LGRAG+L A + + P+ + ++ TLLS
Sbjct: 666 EEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLS 725
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC++ +++ IGE AK L L+P ++ YVLLSN YA G W + RKM+KD G++KE
Sbjct: 726 ACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKE 785
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
P S IEV+ F V + H +I L L+
Sbjct: 786 PGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELN 821
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 151/481 (31%), Positives = 258/481 (53%), Gaps = 6/481 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+SS+L C+K K QG +HA V K + V N ++ LY G LA +VF +M
Sbjct: 147 LSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDML 206
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQ 121
+ V+++ +ISGH Q G AL+ F +M L P+ AS ++ACA + L KG+Q
Sbjct: 207 FCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQ 266
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H+Y LK G + SL+ +Y+K G A ++ N+V +N ++ + +
Sbjct: 267 LHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISD 326
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
K FE+F M G+ P++F++ L C+ + + G +H L++K ES+ +V
Sbjct: 327 LAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGV 386
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +YSK+ + +A K ++E++D++SW + IA E+ L+ FKEM D GV P
Sbjct: 387 LIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEM-QDCGVWP 445
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D+ AS +ACAG+ +++ G QIHA + D+ + N LVN+YA+CG ++ LF
Sbjct: 446 DNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLF 505
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
E+ H++ ++WN +I+ RL AL +F +M G K + TFI ++A + +K
Sbjct: 506 REIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIK 565
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+G+ KT G + + E LI L G+ G + +A+ + L ++ + T++++
Sbjct: 566 QGKQVHGRAVKT-GHTSETEVANALISLYGKCGSIEDAKMIFSEMSL-RNEVSWNTIITS 623
Query: 482 C 482
C
Sbjct: 624 C 624
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 137/441 (31%), Positives = 230/441 (52%), Gaps = 5/441 (1%)
Query: 22 ISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQA 81
+ +HA + G+ D ++ N +++LYAK G + AR+VF E+S R+ VSW AM+SG+ Q+
Sbjct: 63 LEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQS 122
Query: 82 GEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVG 138
G A +SQMH ++P Y+ +S +SAC + +G+ IHA K + S +FVG
Sbjct: 123 GLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVG 182
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL 198
N+LI++Y+ G A V+ + + V+FN LI+G + E ++F M GL
Sbjct: 183 NALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLR 242
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKA 258
PD + A L C+ DL+KG LH +K + + +++ LY K I A
Sbjct: 243 PDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDI 302
Query: 259 FRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
F L + +++ WN + A +D K +F +M G+ P+ FT+ IL C
Sbjct: 303 FNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQAT-GIHPNQFTYPCILRTCTCTGQ 361
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA 378
++ G+QIH+ I+ D+ V L++MY+K G + + K+ + R+VVSW ++IA
Sbjct: 362 IELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAG 421
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISP 438
+ H AL F++M+ G+ PD++ +AC +++G ++ G +
Sbjct: 422 YVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQG-LQIHARVYVSGYAA 480
Query: 439 DIEHFTCLIDLLGRAGKLLEA 459
DI + L++L R G+ EA
Sbjct: 481 DISIWNTLVNLYARCGRSEEA 501
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/576 (36%), Positives = 339/576 (58%), Gaps = 5/576 (0%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
ISS+L CS + L+ G +H VL+ G DV V N +++ Y KC K+ RK+F+ +
Sbjct: 258 ISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLV 317
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
++++VSW+ MI+G Q H A++ F +M P+ + S +++C +Q+L KG+Q
Sbjct: 318 DKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQ 377
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+HAY++K + FV N LI MY K ++A V+ N+VS+NA+I G+ +
Sbjct: 378 VHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDK 437
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ ++F+ M P +F L + S L +HCL +K + + F G+
Sbjct: 438 LVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSA 497
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +YSK + +G+A F I ++D++ WN + S + E+ L ++K++ ++P
Sbjct: 498 LIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSR-LKP 556
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
++FTFA+++AA + +AS++HG+Q H +I+M L+ D V N+LV+MYAKCG I S+K F
Sbjct: 557 NEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAF 616
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ R++ WN++I+ +A H AL++FE+M G+KP+ VTF+GLL+AC+HAGL+
Sbjct: 617 SSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLD 676
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
G +F SM K +GI P I+H+ C++ LLGRAGK+ EA+E+ KK P+ +V +LLSA
Sbjct: 677 LGFHHFESMSK-FGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSA 735
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
CR+ V +G A+ P + Y+LLSN++AS GMW V R+ + S + KEP
Sbjct: 736 CRVSGHVELGTYAAEMAISCDPADSGSYILLSNIFASKGMWASVRMVREKMDMSRVVKEP 795
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
+S IEV +F + +H I+ +L L L
Sbjct: 796 GWSWIEVNNEVHRFIARDTAHRDSTLISLVLDNLIL 831
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 212/390 (54%), Gaps = 6/390 (1%)
Query: 24 LHAAVLKMGI-QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
+HA ++ +G Q DV + N +L+ Y+K A+K+FD M RNLV+WS+M+S + Q G
Sbjct: 73 IHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHG 132
Query: 83 EHLLALEFFSQMHL----LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVG 138
+ AL F + PNEYI AS + AC + +L + Q+H + +K G+ +VG
Sbjct: 133 YSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVG 192
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL 198
SLI Y K GY +A L++ V++ A+IAG+ + + E ++F M +
Sbjct: 193 TSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVY 252
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKA 258
PDR+ + L CS+ L G +H ++ + + V N I+ Y K + + K
Sbjct: 253 PDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKL 312
Query: 259 FRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
F + +KD++SW T IA C + + + +F EM G +PD F S+L +C L +
Sbjct: 313 FNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVR-KGWKPDAFGCTSVLNSCGSLQA 371
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA 378
+Q G+Q+HA+ I++ ++ D V N L++MYAKC ++ + K+F+ + NVVS+N +I
Sbjct: 372 LQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEG 431
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFI 408
++ AL LF +M+ + P +TF+
Sbjct: 432 YSRQDKLVEALDLFREMRLSLSPPTLLTFV 461
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/460 (27%), Positives = 245/460 (53%), Gaps = 5/460 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
++S++ C++ L Q + LH V+K G DV V +++ YAK G + AR +FD +
Sbjct: 157 LASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLK 216
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQ 121
+ V+W+A+I+G+ + G ++L+ F+QM + P+ Y+ +S +SAC+ ++ L G+Q
Sbjct: 217 VKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQ 276
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
IH Y L+ G+ V N +I Y+K ++ + ++VS+ +IAG ++N
Sbjct: 277 IHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSF 336
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
++F M+R+G PD F L C L+KG +H +K ++++ FV N
Sbjct: 337 HGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNG 396
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y+K + + A K F L+ +++S+N I S + L +F+EM P
Sbjct: 397 LIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLS-PP 455
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
TF S+L + L ++ QIH +I+ ++ D G+AL+++Y+KC + + +F
Sbjct: 456 TLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVF 515
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
E+ R++V WN + + ++ +LKL++ ++ + +KP+ TF ++ A ++ ++
Sbjct: 516 EEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLR 575
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
G+ + N + K G+ D L+D+ + G + E+ +
Sbjct: 576 HGQQFHNQVIKM-GLDDDPFVTNSLVDMYAKCGSIEESHK 614
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++++ S +L+ G H V+KMG+ D V+N ++++YAKCG + + K F
Sbjct: 560 TFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSST 619
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
++R++ W++MIS + Q G+ ALE F +M + PN F +SAC+
Sbjct: 620 NQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACS 670
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/572 (35%), Positives = 324/572 (56%), Gaps = 4/572 (0%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L CS L G +H V++ G+ D V N ++++YAKCG + AR+VFD M+ R
Sbjct: 134 SILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASR 193
Query: 67 NLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
+ VSW+ + + ++G E L Q + P+ + + +SAC + +L KG+QIH
Sbjct: 194 DEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIH 253
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A+ ++ Y S V +L MYMK G DA V+ +++++N +I GFV++ Q E
Sbjct: 254 AHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLE 313
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ F ML +G+ PDR ++ L C+ L +G +H K L S+ GN ++
Sbjct: 314 EAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALI 373
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+YSK + +A + F + ++D++SW T + + C + + FK+M GV+ +
Sbjct: 374 NMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQ-QGVKANK 432
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T+ +L AC+ +++ GK+IHA +++ L D+ V NAL++MY KCG + + ++F
Sbjct: 433 ITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEG 492
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M R+VV+WNT+I + G AL+ +E MK+ G++P++ TF+ +L+AC LV+EG
Sbjct: 493 MSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEG 552
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
F M K YGI P +H+ C++D+L RAG L EAE+ PL + G LL+ACR
Sbjct: 553 RRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACR 612
Query: 484 LRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSY 543
+ +V IGER A+ L+P YV LS +YA+ GMW DVA RK +K+ G+KKEP
Sbjct: 613 IHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGR 672
Query: 544 SMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S IE+ G F + SH + EI L+TL
Sbjct: 673 SWIEIAGEVHSFVARDQSHPRTQEIYAELETL 704
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 197/381 (51%), Gaps = 3/381 (0%)
Query: 99 NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY 158
+ Y + + +C + L G+Q+H + L+ G ++ N+L+ +Y G ++A ++
Sbjct: 27 DSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLF 86
Query: 159 GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLR 218
+ ++VS+N +I+G+ ++ F +F LM ++ L PD+F+F L CS L
Sbjct: 87 DKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLN 146
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
G +H ++ L ++ VGN ++++Y+K + +A + F + +D +SW T A +
Sbjct: 147 WGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYA 206
Query: 279 HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
E+ L + M + VRP T+ ++L+AC LA+++ GKQIHAH++ + DV
Sbjct: 207 ESGYGEESLKTYHAMLQER-VRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDV 265
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
V AL MY KCG + ++F + +R+V++WNT+I + A F +M
Sbjct: 266 RVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEE 325
Query: 399 GIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLE 458
G+ PD T+ +L+AC G + G+ K G+ D+ LI++ +AG + +
Sbjct: 326 GVAPDRATYTTVLSACARPGGLARGKEIHARAAKD-GLVSDVRFGNALINMYSKAGSMKD 384
Query: 459 AEEYTKKFPLGQDPIVLGTLL 479
A + + P +D + TLL
Sbjct: 385 ARQVFDRMP-KRDVVSWTTLL 404
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 147/276 (53%), Gaps = 4/276 (1%)
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
+V + + R+G D + + L+ C + DL G +H ++C ++ N ++ NT++ LY
Sbjct: 14 DVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLY 73
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
+ + EA + F K ++SWN I+ +H ++ ++F M + + PD FTF
Sbjct: 74 AHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQER-LEPDKFTF 132
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
SIL+AC+ A + G++IH ++ L D VGNAL++MYAKCG + + ++F+ M
Sbjct: 133 VSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMAS 192
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH-AGLVKEGEA 425
R+ VSW T+ A+A G +LK + M ++P +T++ +L+AC A L K +
Sbjct: 193 RDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQI 252
Query: 426 YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ + +E Y D+ T L + + G +A E
Sbjct: 253 HAHIVESEY--HSDVRVSTALTKMYMKCGAFKDARE 286
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 190/420 (45%), Gaps = 54/420 (12%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +++L C++ L +G +HA K G+ DV N ++N+Y+K G M AR+VFD M
Sbjct: 333 TYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRM 392
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+R++VSW+ ++ + + + + F QM + N+ + + AC+ +L G+
Sbjct: 393 PKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGK 452
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+IHA +K G + V N+L+SMY K G DA+ V+ ++V++N LI G +N
Sbjct: 453 EIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNG 512
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ + + +++M +G+ P+ +F L C V N + + G
Sbjct: 513 RGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEE-------------------GR 553
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
A SK I EK + + + +A H + E + ++
Sbjct: 554 RQFAFMSKDYGIVPTEKHYACMVD--------ILARAGHLREAEDVILTIP-------LK 598
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P + ++LAAC +V+ G++ H +++ Q+ G+ +L +YA G+ KL
Sbjct: 599 PSAAMWGALLAACRIHCNVEIGERAAEHCLKLE-PQNAGLYVSLSAIYAAAGMWRDVAKL 657
Query: 361 FNEMLHRNV-----VSW-------NTIIAAHANH----RLGGSALKLFEQMKATGIKPDS 404
M R V SW ++ +A +H + L +QMK+ G PD+
Sbjct: 658 RKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMKSLGYVPDT 717
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/576 (35%), Positives = 336/576 (58%), Gaps = 4/576 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+ C+ AL+ G LH LK DV++ L++Y KC + A+K+F+ +
Sbjct: 277 TFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSL 336
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
NL S++A+I G+ ++ + + AL F + L +E + A ACA I+ ++G
Sbjct: 337 PNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGL 396
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H S+K S V N+++ MY K G +A LV+ E + VS+NA+IA +N
Sbjct: 397 QVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNG 456
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
EK +F ML+ G+ PD F++ L+ C+ L GM +H +K +L + FVG
Sbjct: 457 NEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGI 516
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +YSK ++ +AEK + E+ ++SWN I+ S E+ F +M + GV
Sbjct: 517 ALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKML-EMGVD 575
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD+FT+A+IL CA L +V+ GKQIHA +I+ L D + + LV+MY+KCG + +
Sbjct: 576 PDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLI 635
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F + +R+ V+WN ++ +A H LG ALK+FE M+ +KP+ TF+ +L AC H GLV
Sbjct: 636 FEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLV 695
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
++G YF+SM YG+ P +EH++C++D++GR+G++ +A E + P D ++ TLLS
Sbjct: 696 EKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLS 755
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
C++ +V + E+ A + L+P ++ YVLLSN+YA+ GMW +V RKM++ +GLKKE
Sbjct: 756 ICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKE 815
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
P S IE++ F V + +H + EI L L+
Sbjct: 816 PGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLT 851
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 151/467 (32%), Positives = 251/467 (53%), Gaps = 5/467 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + +L CS + GI +H +KMG DV+ + +L++YAKC K+ + + F M
Sbjct: 176 TFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSM 235
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
E+N VSWSA+I+G Q + LE F +M + ++ FAS +CAG+ +L G
Sbjct: 236 PEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGS 295
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H ++LK + + +G + + MYMK SDA ++ NL S+NA+I G+ +
Sbjct: 296 QLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSD 355
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ + +F+L+ + GL D S +G C+V +G+ +H L++K +SN V N
Sbjct: 356 KGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVAN 415
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
I+ +Y K + EA F + +D +SWN IAA + EK LS+F M G+
Sbjct: 416 AILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQS-GME 474
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD+FT+ S+L ACAG ++ G +IH +I+ RL D VG AL++MY+KCG++ + KL
Sbjct: 475 PDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKL 534
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
+ + + VVSWN II+ + + A K F +M G+ PD+ T+ +L C + V
Sbjct: 535 HDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTV 594
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+ G+ + K + D + L+D+ + G + + + +K P
Sbjct: 595 ELGKQIHAQIIKKE-LQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP 640
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/493 (27%), Positives = 237/493 (48%), Gaps = 36/493 (7%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKC------------ 50
K+ S + CS KAL G HA ++ +P V V+N ++ +Y KC
Sbjct: 43 KTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDG 102
Query: 51 -------------------GKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFF 91
G + +A+K+FD M ER++VSW+++ISG+ G+H ++ F
Sbjct: 103 MPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVF 162
Query: 92 SQMHLLPNEY---IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKV 148
QM + + FA + +C+ ++ G QIH ++K G+ G++L+ MY K
Sbjct: 163 LQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKC 222
Query: 149 GYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGL 208
++ + E N VS++A+IAG V+N G E+FK M + G+ + +FA
Sbjct: 223 KKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVF 282
Query: 209 EICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLI 268
C+ + LR G LH +K ++ +G + +Y K N + +A+K F + +L
Sbjct: 283 RSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQ 342
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
S+N I + + L +F+ + G+ D+ + + ACA + G Q+H
Sbjct: 343 SYNAIIVGYARSDKGIEALGMFRLLQKS-GLGLDEVSLSGAFRACAVIKGDLEGLQVHGL 401
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
++ ++ V NA+++MY KCG + + +F EM+ R+ VSWN IIAAH +
Sbjct: 402 SMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKT 461
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID 448
L LF M +G++PD T+ +L AC + G N + K+ + D LID
Sbjct: 462 LSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSR-LGLDSFVGIALID 520
Query: 449 LLGRAGKLLEAEE 461
+ + G + +AE+
Sbjct: 521 MYSKCGMMEKAEK 533
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 197/407 (48%), Gaps = 36/407 (8%)
Query: 86 LALEFFSQMHLLPNEY-IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISM 144
L + FS P + F+ C+ ++L G+Q HA + + FV N LI M
Sbjct: 27 LPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQM 86
Query: 145 YMKVG-----------------YSSDALL--------------VYGEAFEPNLVSFNALI 173
Y+K S +A+L ++ E ++VS+N+LI
Sbjct: 87 YIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLI 146
Query: 174 AGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE 233
+G++ N K +VF M R G + DR +FA L+ CS D G+ +H L VK +
Sbjct: 147 SGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFD 206
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
+ G+ ++ +Y+K + + + F + EK+ +SW+ IA C D GL +FKEM
Sbjct: 207 CDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEM 266
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
GV TFAS+ +CAGL++++ G Q+H H ++ DV +G A ++MY KC
Sbjct: 267 QK-AGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNN 325
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+S + KLFN + + N+ S+N II +A G AL +F ++ +G+ D V+ G A
Sbjct: 326 LSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRA 385
Query: 414 CNHAGLVKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
C EG + + SM+ +I ++D+ G+ G L+EA
Sbjct: 386 CAVIKGDLEGLQVHGLSMKSL--CQSNICVANAILDMYGKCGALVEA 430
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 135/321 (42%), Gaps = 33/321 (10%)
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+++ P K + Q + +F+ + CS L G H + + + F
Sbjct: 19 QSKSPFKTLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVF 78
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS---------------------------- 269
V N ++ +Y K + + A K F + ++D +S
Sbjct: 79 VTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERD 138
Query: 270 ---WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
WN+ I+ H D+ K + VF +M G D TFA +L +C+ L G QIH
Sbjct: 139 VVSWNSLISGYLHNGDHRKVIDVFLQMGR-MGTVFDRTTFAVVLKSCSSLEDHGGGIQIH 197
Query: 327 AHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGG 386
++M + DV G+AL++MYAKC + CS + F+ M +N VSW+ IIA +
Sbjct: 198 GLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLR 257
Query: 387 SALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCL 446
L+LF++M+ G+ TF + +C ++ G KT D+ T
Sbjct: 258 GGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKT-DFGTDVVIGTAT 316
Query: 447 IDLLGRAGKLLEAEEYTKKFP 467
+D+ + L +A++ P
Sbjct: 317 LDMYMKCNNLSDAQKLFNSLP 337
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/569 (36%), Positives = 332/569 (58%), Gaps = 7/569 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+SS+L CS + L+ G +HA VL+ G + DV V N +++ Y KC ++ RK+FD+M
Sbjct: 233 VSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMV 292
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQ 121
+N++SW+ MISG+ Q A++ F +M+ L P+ + S +++C ++L +G+Q
Sbjct: 293 VKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQ 352
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+HAY++K S FV N LI MY K DA V+ E N++S+NA+I G+ ++
Sbjct: 353 VHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEK 412
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ E+F M + P +F L + + L +H L +K + + F G+
Sbjct: 413 LSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSA 472
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +YSK + + +A F + EKD++ WN + + E+ L ++ + +P
Sbjct: 473 LIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQ-KP 531
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
++FTFA+++ A + LAS++HG+Q H L++M L+ V NALV+MYAKCG I + K+F
Sbjct: 532 NEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMF 591
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
N + R+VV WN++I+ HA H AL +F +M GI+P+ VTF+ +L+AC+HAG V+
Sbjct: 592 NSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVE 651
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+G +FNSM +GI P EH+ C++ LLGR+GKL EA+E+ +K P+ IV +LLSA
Sbjct: 652 DGLNHFNSM-PGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSA 710
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
CR+ +V +G+ A+ P + Y+LLSN++AS GMW DV R + S + KEP
Sbjct: 711 CRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEP 770
Query: 542 SYSMIEVQGTFEKFTVAEFSH--SKIGEI 568
S IEV F + +H + IG +
Sbjct: 771 GRSWIEVNNKVNVFIARDTTHREADIGSV 799
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 141/464 (30%), Positives = 257/464 (55%), Gaps = 13/464 (2%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
++S++ C++ +++G LH V++ G DV V +++ Y+K G + AR VFD++S
Sbjct: 132 LASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLS 191
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
E+ V+W+ +I+G+ + G ++LE F+QM +++P+ Y+ +S +SAC+ ++ L G+Q
Sbjct: 192 EKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQ 251
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
IHAY L+ G V N LI Y K ++ + N++S+ +I+G+++N
Sbjct: 252 IHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSF 311
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ ++F M R G PD F+ L C L +G +H T+K LES+ FV N
Sbjct: 312 DWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNG 371
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR- 300
++ +Y+K NL+ +A+K F ++ E+++IS+N I S + L +F EM VR
Sbjct: 372 LIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMR----VRL 427
Query: 301 --PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
P TF S+L A L +++ KQIH +I+ ++ D+ G+AL+++Y+KC + +
Sbjct: 428 FPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDAR 487
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+F EM +++V WN + + H ALKL+ ++ + KP+ TF L+TA ++
Sbjct: 488 HVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLA 547
Query: 419 LVKEGEAYFNSMEKT-YGISPDIEHFTCLIDLLGRAGKLLEAEE 461
++ G+ + N + K P + + L+D+ + G + EA +
Sbjct: 548 SLRHGQQFHNQLVKMGLDFCPFVTN--ALVDMYAKCGSIEEARK 589
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 133/441 (30%), Positives = 234/441 (53%), Gaps = 8/441 (1%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+H ++ G+Q D ++N ++N+ +K ++ AR VFD+M +NL++WS+M+S + Q G
Sbjct: 49 IHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGY 108
Query: 84 HLLALEFFSQMHLL----PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
AL F + PNE++ AS I AC + + KG Q+H + ++ G+ +VG
Sbjct: 109 SEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGT 168
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
SLI Y K G +A LV+ + E V++ +IAG+ + + E+F M ++P
Sbjct: 169 SLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVP 228
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
DR+ + L CS+ L G +H ++ E + V N ++ Y+K N + K F
Sbjct: 229 DRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLF 288
Query: 260 RLIEEKDLISWNTFIAA-CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
+ K++ISW T I+ + D+E + +F EM N G +PD F S+L +C +
Sbjct: 289 DQMVVKNIISWTTMISGYMQNSFDWE-AMKLFGEM-NRLGWKPDGFACTSVLTSCGSREA 346
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA 378
++ G+Q+HA+ I+ L D V N L++MYAK L+ + K+F+ M +NV+S+N +I
Sbjct: 347 LEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEG 406
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISP 438
+++ AL+LF +M+ P +TF+ LL + + E + + +G+S
Sbjct: 407 YSSQEKLSEALELFHEMRVRLFPPSLLTFVSLL-GVSASLFALELSKQIHGLIIKFGVSL 465
Query: 439 DIEHFTCLIDLLGRAGKLLEA 459
D+ + LID+ + + +A
Sbjct: 466 DLFAGSALIDVYSKCSYVKDA 486
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 187/372 (50%), Gaps = 11/372 (2%)
Query: 95 HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDA 154
+L P FA+ + ++ + IH + G S +F+ N LI++ K +A
Sbjct: 22 NLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNA 81
Query: 155 LLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVF-KLMLRQGLLPDRFSFAGGLEICSV 213
+V+ + NL++++++++ + + E+ VF L + G P+ F A + C+
Sbjct: 82 RVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQ 141
Query: 214 SNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTF 273
+ KG LH V+ + + +VG +++ YSK I EA F + EK ++W T
Sbjct: 142 LGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTI 201
Query: 274 IAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR 333
IA + C L +F +M + V PD + +S+L+AC+ L ++ GKQIHA+++R
Sbjct: 202 IAGYTKCGRSAVSLELFAQM-RETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRG 260
Query: 334 LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFE 393
DV V N L++ Y KC + KLF++M+ +N++SW T+I+ + + A+KLF
Sbjct: 261 TEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFG 320
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF----TCLIDL 449
+M G KPD +LT+C +++G Y I ++E LID+
Sbjct: 321 EMNRLGWKPDGFACTSVLTSCGSREALEQGRQV-----HAYTIKANLESDEFVKNGLIDM 375
Query: 450 LGRAGKLLEAEE 461
++ L++A++
Sbjct: 376 YAKSNLLIDAKK 387
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++L+ S +L+ G H ++KMG+ V+N ++++YAKCG + ARK+F+
Sbjct: 535 TFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSS 594
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
R++V W++MIS H Q GE AL F +M + PN F + +SAC+
Sbjct: 595 IWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACS 645
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/576 (36%), Positives = 324/576 (56%), Gaps = 4/576 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++SLL C+ LQ+G LH+ +LK G+ D I +L+LY KCG + A +F+
Sbjct: 247 TVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLG 306
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
N+V W+ M+ + Q + + E F QM + PN++ + + C + G+
Sbjct: 307 DRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGE 366
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH+ S+K G+ S +V LI MY K A + + ++VS+ ++IAG+V++
Sbjct: 367 QIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHD 426
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E+ FK M G+ PD A C+ +R+G+ +H ++ + N
Sbjct: 427 FCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWN 486
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
T++ LY++ EA FR I+ KD I+WN I+ YE+ L VF +MS G +
Sbjct: 487 TLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQ-AGAK 545
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ FTF S ++A A LA ++ GKQ+H ++ + V NAL+++Y KCG I + +
Sbjct: 546 YNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMI 605
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+EM RN VSWNTII + + H G AL LF+QMK G+KP+ VTFIG+L AC+H GLV
Sbjct: 606 FSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLV 665
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+EG +YF SM YG++P +H+ C++D+LGRAG+L A + + P+ + ++ TLLS
Sbjct: 666 EEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLS 725
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC++ +++ IGE AK L L+P ++ YVLLSN YA G W + RKM+KD G++KE
Sbjct: 726 ACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKE 785
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
P S IEV+ F V + H +I L L+
Sbjct: 786 PGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELN 821
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 151/481 (31%), Positives = 258/481 (53%), Gaps = 6/481 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+SS+L C+K K QG +HA V K + V N ++ LY G LA +VF +M
Sbjct: 147 LSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDML 206
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQ 121
+ V+++ +ISGH Q G AL+ F +M L P+ AS ++ACA + L KG+Q
Sbjct: 207 FCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQ 266
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H+Y LK G + SL+ +Y+K G A ++ N+V +N ++ + +
Sbjct: 267 LHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISD 326
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
K FE+F M G+ P++F++ L C+ + + G +H L++K ES+ +V
Sbjct: 327 LAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGV 386
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +YSK+ + +A K ++E++D++SW + IA E+ L+ FKEM D GV P
Sbjct: 387 LIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEM-QDCGVWP 445
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D+ AS +ACAG+ +++ G QIHA + D+ + N LVN+YA+CG ++ LF
Sbjct: 446 DNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLF 505
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
E+ H++ ++WN +I+ RL AL +F +M G K + TFI ++A + +K
Sbjct: 506 REIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIK 565
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+G+ KT G + + E LI L G+ G + +A+ + L ++ + T++++
Sbjct: 566 QGKQVHGRAVKT-GHTSETEVANALISLYGKCGSIEDAKMIFSEMSL-RNEVSWNTIITS 623
Query: 482 C 482
C
Sbjct: 624 C 624
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 136/441 (30%), Positives = 228/441 (51%), Gaps = 5/441 (1%)
Query: 22 ISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQA 81
+ +HA + G+ D ++ N +++LYAK G + AR+VF E+S R+ VSW AM+SG+ Q
Sbjct: 63 LEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQR 122
Query: 82 GEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVG 138
G A +SQMH ++P Y+ +S +SAC + +G+ IHA K + S +FVG
Sbjct: 123 GLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVG 182
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL 198
N+LI++Y+ G A V+ + + V+FN LI+G + E ++F M GL
Sbjct: 183 NALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLR 242
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKA 258
PD + A L C+ DL+KG LH +K + + +++ LY K I A
Sbjct: 243 PDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDI 302
Query: 259 FRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
F L + +++ WN + A +D K +F +M G+ P+ FT+ IL C
Sbjct: 303 FNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQAT-GIHPNKFTYPCILRTCTCTGQ 361
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA 378
++ G+QIH+ I+ D+ V L++MY+K + + K+ + R+VVSW ++IA
Sbjct: 362 IELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAG 421
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISP 438
+ H AL F++M+ G+ PD++ +AC +++G ++ G +
Sbjct: 422 YVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQG-LQIHARVYVSGYAA 480
Query: 439 DIEHFTCLIDLLGRAGKLLEA 459
DI + L++L R G+ EA
Sbjct: 481 DISIWNTLVNLYARCGRSEEA 501
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/648 (33%), Positives = 358/648 (55%), Gaps = 74/648 (11%)
Query: 1 MAKSISSLLHHCSKTKALQQGIS-LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKV 59
++ + LL C K K + +HA+V+K G +V + N +++ YAKCG + R++
Sbjct: 18 VSSPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQL 77
Query: 60 FDEMSERNL-------------------------------VSWSAMISGHHQAGEHLLAL 88
FD+M +RN+ +W++M+SG Q AL
Sbjct: 78 FDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 89 EFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMY 145
+F+ MH + NEY FAS +SAC+G+ + +G QIH+ K S ++G++L+ MY
Sbjct: 138 YYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMY 197
Query: 146 MKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA 205
K G +DA V+ E + N+VS+N+LI + +N + +VF++ML + PD + A
Sbjct: 198 SKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLA 257
Query: 206 GGLEICSVSNDLRKGMILHCLTVKC-KLESNPFVGNTIMALYSKFNLIGEAE-------- 256
+ C+ + ++ G +H VK KL ++ + N + +Y+K + I EA
Sbjct: 258 SVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Query: 257 -------------------KAFRLI----EEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
KA RL+ E++++SWN IA + + E+ LS+F +
Sbjct: 318 RNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL 377
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN------QDVGVGNALVNM 347
+ V P +TFA+IL ACA LA + G Q H H+++ D+ VGN+L++M
Sbjct: 378 KRE-SVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDM 436
Query: 348 YAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTF 407
Y KCG + Y +F +M+ R+ VSWN +I A + G AL+LF +M +G KPD +T
Sbjct: 437 YVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITM 496
Query: 408 IGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
IG+L+AC HAG V+EG YF+SM + +G++P +H+TC++DLLGRAG L EA+ ++ P
Sbjct: 497 IGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMP 556
Query: 468 LGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAG 527
+ D ++ G+LL+AC++ R++ +G+ +A++LF ++ + + PYVLLSN+YA G WGD
Sbjct: 557 VQPDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMN 616
Query: 528 ARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
RK+++ G+ K+P S I++ G F V + SH + +I+ +L L
Sbjct: 617 VRKLMRKEGVTKQPGCSWIKIPGHAHVFMVKDKSHPRKKQIHSLLDIL 664
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/567 (35%), Positives = 334/567 (58%), Gaps = 7/567 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVL--KMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
LL + TK L+ G +HA ++ + +++ N ++NLYAKC ++++AR +FD M +
Sbjct: 31 LLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRK 90
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQ 121
RN+VSW A+++G+ G L L F M ++ PNEYIFA+ IS+C+ +V+G Q
Sbjct: 91 RNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQ 150
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
H Y+LK G +V N+LI MY + A+ V+ E ++ S+N +I G +EN
Sbjct: 151 CHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGY 210
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
P + EV M+ + ++ D ++ +CS DLR G+ +HC + E + FV +
Sbjct: 211 PSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSA 270
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
I+ +Y K I A K F ++ K+++SW +AA S +E+ L+ F EM D G+ P
Sbjct: 271 IIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVD-GLLP 329
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
+++TFA +L +CAG++++ HGK +H + + + VGNAL+NMY+K G I ++K+F
Sbjct: 330 NEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVF 389
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
EM+ R+ ++W+ +I ++H LG AL +F++M A P VTF+G+L+AC H G V+
Sbjct: 390 LEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQ 449
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
EG Y N + K GI P +EH+TC++ LL +AG+L EAE + K P+ D + TLLSA
Sbjct: 450 EGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSA 509
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
C + ++ +G+++A+ + + P Y+LLSN+YA W V RK++++ +KKEP
Sbjct: 510 CHVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKEP 569
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEI 568
S IE++ + F +H + +I
Sbjct: 570 GASWIEIRNSIHVFVSEGKTHPESNQI 596
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 190/398 (47%), Gaps = 9/398 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
++++ CS + + +G H LK G+ V N ++ +Y++ + A V+ E+
Sbjct: 133 ATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPG 192
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQI 122
++ S++ +I+G + G ALE +M ++ + + +A C+ ++ L G Q+
Sbjct: 193 LDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQV 252
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H + G SFV +++I MY K G +A V+ N+VS+ A++A + +N
Sbjct: 253 HCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCF 312
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E+ F M GLLP+ ++FA L C+ + L G +LH K E + VGN +
Sbjct: 313 EEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNAL 372
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +YSK I A K F + +D I+W+ I SH + L VF+EM P
Sbjct: 373 INMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKEC-PH 431
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCSYKLF 361
TF +L+ACA L SVQ G L++ + V +V + K G + +
Sbjct: 432 YVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFM 491
Query: 362 NEM-LHRNVVSWNTIIAA---HANHRLGGSALKLFEQM 395
+ +VV+W T+++A H N+ LG +L QM
Sbjct: 492 KSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQM 529
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/579 (36%), Positives = 334/579 (57%), Gaps = 12/579 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+L C ++++G +H + K+GI+ DVIV+N +L++Y K +I R++FD+M
Sbjct: 218 TMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKM 277
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM--HLLPNEYIFASAISACAGIQSLVKGQQ 121
R+ VSW+ MI G+ Q G + +++ F +M P+ S + AC + L G+
Sbjct: 278 VLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKY 337
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE----PNLVSFNALIAGFV 177
+H Y + GY + N LI+MY K G LL E F + VS+N++I ++
Sbjct: 338 VHDYMITSGYECDTTASNILINMYAKCG----NLLASQEVFSGMKCKDSVSWNSMINVYI 393
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+N ++ ++FK+M + + PD ++ L + + DL G LHC K SN
Sbjct: 394 QNGSFDEAMKLFKMM-KTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIV 452
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V NT++ +Y+K +G++ K F ++ +D+I+WNT IA+C H D GL + M +
Sbjct: 453 VSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTE- 511
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
GV PD T SIL C+ LA+ + GK+IH + ++ L DV VGN L+ MY+KCG + S
Sbjct: 512 GVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNS 571
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+++F M ++VV+W +I+A + G A++ F +M+A GI PD V F+ ++ AC+H+
Sbjct: 572 FQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHS 631
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV+EG YF+ M+K Y I P IEH+ C++DLL R+ L +AE++ PL D + G
Sbjct: 632 GLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGA 691
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LLSACR+ D I ER+++++ L P T YVL+SN+YA+ G W V RK +K GL
Sbjct: 692 LLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGL 751
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
KK+P S +E+Q F + E+N +L L+
Sbjct: 752 KKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLA 790
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 148/499 (29%), Positives = 253/499 (50%), Gaps = 12/499 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
SIS L + T L + LH+ ++ +G+ VI S ++ YA + VF
Sbjct: 18 SISRALASAATTTQLHK---LHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLA 74
Query: 64 SERNLVS-WSAMISGHHQAGEHLLALEFFSQ---MHLLPNEYIFASAISACAGIQSLVKG 119
S N V W+++I G AL +S+ + L P+ Y F S I+ACAG+
Sbjct: 75 SPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMA 134
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ IH L G+ S ++GN+LI MY + A V+ E ++VS+N+LI+G+ N
Sbjct: 135 KSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNAN 194
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ E++ G++PD ++ + L C + +G I+H L K ++ + V
Sbjct: 195 GYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVN 254
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N ++++Y KFN + + + F + +D +SWNT I S YE+ + +F EM N
Sbjct: 255 NGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ--F 312
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+PD T SIL AC L ++ GK +H ++I D N L+NMYAKCG + S +
Sbjct: 313 KPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQE 372
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F+ M ++ VSWN++I + + A+KLF+ MK T +KPDSVT++ LL+ G
Sbjct: 373 VFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMK-TDVKPDSVTYVMLLSMSTQLGD 431
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
+ G+ + K G + +I L+D+ + G++ ++ + + +D I T++
Sbjct: 432 LHLGKELHCDLAKM-GFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMK-ARDIITWNTII 489
Query: 480 SACRLRRDVVIGERLAKQL 498
++C D +G R+ ++
Sbjct: 490 ASCVHSEDCNLGLRMISRM 508
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 5/178 (2%)
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN-EM 364
F+SI A A A+ ++H+ +I + L+ V L+ YA + S+ +F
Sbjct: 16 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 75
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK-EG 423
NV WN+II A ++ L AL L+ + + ++PD+ TF ++ AC AGL+ E
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC--AGLLDFEM 133
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+ G D+ LID+ R L +A + ++ PL +D + +L+S
Sbjct: 134 AKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPL-RDVVSWNSLISG 190
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/574 (37%), Positives = 327/574 (56%), Gaps = 14/574 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S++ CS + G LHA VLK +I N ++++Y K +I A VF M
Sbjct: 166 TFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRM 225
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKG 119
+ R+L+SW +MI+G Q G L AL +F +M LPNE+IF S SAC+ + G
Sbjct: 226 ATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYG 285
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+H S+KFG F G SL MY K G S A +V+ + P+LV++NA+IAGF
Sbjct: 286 RQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYG 345
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
++ F M QGL+PD + L C+ ++L +GM +H K L+ + V
Sbjct: 346 GDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVC 405
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEE----KDLISWNTFIAACSHCADYEKGLSVFKEMS- 294
NT++ +Y+K E A EE DL+SWN + AC E+ + K M
Sbjct: 406 NTLLTMYAK---CSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCI 462
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
+ H RPD T ++L A A S++ G Q+H + ++ LN D V N L+++YAKCG +
Sbjct: 463 SQH--RPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSL 520
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
++K+F+ M++ +VVSW+++I +A G ALKLF+ M+ +KP+ VTF+G+LTAC
Sbjct: 521 KTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTAC 580
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
+H GLV+EG + +MEK +GI+P EH +C++DLL RAG L EAE + + D +V
Sbjct: 581 SHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVV 640
Query: 475 LGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKD 534
TLL+AC+ +V +G+R A+ + + P+ ++ +VLL N+YAS G W DVA R ++K
Sbjct: 641 WKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNIYASKGNWEDVARLRSLMKQ 700
Query: 535 SGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
G++K P S IEV+ F V + H + +I
Sbjct: 701 RGVRKVPGQSWIEVKDRIHVFFVEDSLHPERNKI 734
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 154/459 (33%), Positives = 246/459 (53%), Gaps = 7/459 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
L+ CS ++L+ G +H +LK PD+ + NH+LN+Y KC + A+KVFD M ERN
Sbjct: 69 LISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERN 128
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
+VSW+++I+G+ Q G+ ALEF+ QM ++P+++ F S I AC+ + + G+Q+HA
Sbjct: 129 VVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHA 188
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ LK + + N+LISMY K DAL V+ +L+S+ ++IAGF + +
Sbjct: 189 HVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELE 248
Query: 185 GFEVFKLMLRQGL-LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
FK ML QG+ LP+ F F CS G LH +++K L + F G ++
Sbjct: 249 ALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLC 308
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K L+ A F I DL++WN IA ++ D ++ ++ F +M + G+ PD+
Sbjct: 309 DMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRH-QGLIPDE 367
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T S+L AC + + G Q+H ++ +M L+ DV V N L+ MYAKC + + F E
Sbjct: 368 ITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEE 427
Query: 364 M-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
M + ++VSWN I+ A H +L + M + +PD +T +L A ++
Sbjct: 428 MRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEI 487
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
G KT G++ D LIDL + G L A +
Sbjct: 488 GNQVHCYALKT-GLNCDTSVTNGLIDLYAKCGSLKTAHK 525
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 124/388 (31%), Positives = 207/388 (53%), Gaps = 8/388 (2%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+A ISAC+ ++SL G++IH + LK + N +++MY K DA V+
Sbjct: 66 YAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMP 125
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
E N+VS+ ++IAG+ +N Q E + ML+ G++PD+F+F ++ CS D+ G
Sbjct: 126 ERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQ 185
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
LH +K + ++ N ++++Y+K NLI +A F + +DLISW + IA S
Sbjct: 186 LHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGY 245
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
+ L FKEM + P++F F S+ +AC+ L ++G+Q+H I+ L +DV G
Sbjct: 246 ELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGC 305
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
+L +MYAKCGL+SC+ +F ++ ++V+WN IIA A A+ F QM+ G+ P
Sbjct: 306 SLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIP 365
Query: 403 DSVTFIGLLTACNHAGLVKEG---EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
D +T LL AC + +G Y N M G+ D+ L+ + + +L +A
Sbjct: 366 DEITVRSLLCACTSPSELYQGMQVHGYINKM----GLDLDVPVCNTLLTMYAKCSELRDA 421
Query: 460 EEYTKKFPLGQDPIVLGTLLSACRLRRD 487
+ ++ D + +L+AC +R D
Sbjct: 422 IFFFEEMRCNADLVSWNAILTAC-MRHD 448
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 133/274 (48%), Gaps = 5/274 (1%)
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
K FE L + G ++A + CS L G +H +K K + + N I+
Sbjct: 48 KAFEF--LQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHIL 105
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y K + +A+K F + E++++SW + IA S L + +M GV PD
Sbjct: 106 NMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQS-GVMPDQ 164
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
FTF SI+ AC+ L + G+Q+HAH+++ + NAL++MY K LI + +F+
Sbjct: 165 FTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSR 224
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK-PDSVTFIGLLTACNHAGLVKE 422
M R+++SW ++IA + AL F++M G+ P+ F + +AC+ + L E
Sbjct: 225 MATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACS-SLLQPE 283
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+ M +G+ D+ L D+ + G L
Sbjct: 284 YGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLL 317
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 92/156 (58%)
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
S N +I + + + + F+ + G T+A +++AC+ L S++HGK+IH H
Sbjct: 29 SSNEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDH 88
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
+++ + + D+ + N ++NMY KC + + K+F+ M RNVVSW ++IA ++ + GG+A
Sbjct: 89 MLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNA 148
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
L+ + QM +G+ PD TF ++ AC+ G + G
Sbjct: 149 LEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGR 184
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/586 (35%), Positives = 340/586 (58%), Gaps = 15/586 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++ +L C + L +H +K+G++ DV VS ++N+Y+KCG+M AR +FD M
Sbjct: 185 TLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWM 244
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISAC--AGIQSLVK 118
ER++V W+ M+ G+ Q G A + FS+ H L P+E+ ++ C AG L
Sbjct: 245 RERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLEL 304
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+Q+H ++K G S V NSL++MY K+G + A V+ + +L+S+N++I+ +
Sbjct: 305 GKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQ 364
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAG-----GLEICSVSNDLRKGMILHCLTVKCKLE 233
+ E+ +F +L +GL PD F+ A + C L +G +H +K +
Sbjct: 365 SSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFD 424
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
S+ V + I+ +Y K + A F I D ++W + I+ C + ++ L ++ M
Sbjct: 425 SDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRM 484
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
V PD++TFA+++ A + + +++ G+Q+HA++I++ D VG +LV+MYAKCG
Sbjct: 485 RQSR-VMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGN 543
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
I +Y+LF +M RN+ WN ++ A H A+ LF+ MK+ GI+PD V+FIG+L+A
Sbjct: 544 IEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSA 603
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C+HAGL E Y +SM YGI P+IEH++CL+D LGRAG + EA++ + P
Sbjct: 604 CSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASAS 663
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
+ LL ACR++ DV G+R+A +LF L+P ++ YVLLSN+YA+ W DV ARKM+K
Sbjct: 664 INRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMK 723
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSK----IGEINYMLKTL 575
+KK+P +S I+V+ F V + SH + ++ M+KT+
Sbjct: 724 RKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTI 769
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 143/480 (29%), Positives = 251/480 (52%), Gaps = 31/480 (6%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL T L G HA ++ G D +SN++L +Y+KCG + AR+VFD ER+
Sbjct: 83 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142
Query: 68 LVSWSAMI----------SGHHQAGEHLL-----ALEFFSQMHLLPNEYIFASAISACAG 112
LV+W+A++ G+ Q G HL +L ++M L P + C
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAP-------VLKLCLN 195
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
L + +H Y++K G FV +L+++Y K G DA L++ E ++V +N +
Sbjct: 196 SGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMM 255
Query: 173 IAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC--SVSNDLRKGMILHCLTVKC 230
+ G+V+ ++ F++F R GL PD FS L C + ++DL G +H + VK
Sbjct: 256 LKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKS 315
Query: 231 KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVF 290
L+S+ V N+++ +YSK A + F ++ DLISWN+ I++C+ + E+ +++F
Sbjct: 316 GLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLF 375
Query: 291 KEMSNDHGVRPDDFTFASIL-----AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALV 345
++ ++ G++PD FT ASI AC L + GKQIHAH I+ + D+ V + ++
Sbjct: 376 IDLLHE-GLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGIL 434
Query: 346 NMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV 405
+MY KCG + + +FN + + V+W ++I+ ++ AL+++ +M+ + + PD
Sbjct: 435 DMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEY 494
Query: 406 TFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKK 465
TF L+ A + +++G ++ K +S D T L+D+ + G + +A KK
Sbjct: 495 TFATLIKASSCVTALEQGRQLHANVIKLDCVS-DPFVGTSLVDMYAKCGNIEDAYRLFKK 553
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/562 (36%), Positives = 321/562 (57%), Gaps = 4/562 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++SLL C+ A +G LH+ V+KMG+ D+I+ +L+LY KC + A + F
Sbjct: 316 TVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTT 375
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
N+V W+ M+ + Q G + F QM L+PN+Y + S + C + +L G+
Sbjct: 376 ETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGE 435
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH +K G+ +V + LI MY K G A + E ++VS+ A+IAG+ ++
Sbjct: 436 QIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHD 495
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ ++F+ M QG+ D F+ + C+ L +G +H + + +GN
Sbjct: 496 LFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGN 555
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++LY++ +A AF I+ KD ISWN I+ + E+ L VF +M N GV
Sbjct: 556 ALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQM-NQAGVE 614
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ FTF S ++A A A+++ GKQIHA +I+ + + N L+ +Y+KCG I + +
Sbjct: 615 ANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKRE 674
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F EM +NVVSWN +I ++ H G A+ LFE+MK G+ P+ VTF+G+L+AC+H GLV
Sbjct: 675 FFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLV 734
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG +YF SM K +G+ P EH+ C++DLLGRA L A E+ ++ P+ D ++ TLLS
Sbjct: 735 NEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLS 794
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC + +++ IGE A+ L L+P ++ YVLLSN+YA G W R+M+KD G+KKE
Sbjct: 795 ACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKE 854
Query: 541 PSYSMIEVQGTFEKFTVAEFSH 562
P S IEV+ + F V + H
Sbjct: 855 PGRSWIEVKNSIHAFFVGDRLH 876
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 141/482 (29%), Positives = 252/482 (52%), Gaps = 7/482 (1%)
Query: 4 SISSLLHHCSKTKA-LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+ +S+L CS KA Q +HA ++ G +V N +++LY+K G + LA+ VF+
Sbjct: 113 TFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFER 172
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
+ ++ VSW AMISG Q G A+ F QMH ++P Y+F+S +SAC I+ G
Sbjct: 173 LFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLG 232
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+H + +K+G +S +FV N+L+++Y + G A ++ + + +S+N+LI+G +
Sbjct: 233 EQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQR 292
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
++ ++F+ M + PD + A L C+ KG LH +K + S+ +
Sbjct: 293 GFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIE 352
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+++ LY K I A + F E ++++ WN + A + + +F +M + G+
Sbjct: 353 GSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIE-GL 411
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
P+ +T+ SIL C L ++ G+QIH +I+ +V V + L++MYAK G + +
Sbjct: 412 MPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARG 471
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+ + +VVSW +IA + H L ALKLF++M+ GI+ D++ F ++AC
Sbjct: 472 ILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQA 531
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
+ +G+ ++ G S D+ L+ L R G+ +A +K +D I L+
Sbjct: 532 LNQGQQ-IHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKID-AKDNISWNALI 589
Query: 480 SA 481
S
Sbjct: 590 SG 591
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 252/485 (51%), Gaps = 8/485 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
L C + +L LHA + K G + ++ + ++++Y G++ A K+FD++ N
Sbjct: 16 LFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSN 75
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK-GQQIH 123
+ W+ +ISG L FS M ++ P+E FAS + AC+G ++ + +QIH
Sbjct: 76 VSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIH 135
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A + G+ S V N LI +Y K G+ A LV+ F + VS+ A+I+G +N + +
Sbjct: 136 AKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGRED 195
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ +F M + ++P + F+ L C+ + G LH VK L S FV N ++
Sbjct: 196 EAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALV 255
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
LYS++ + AE+ F + +D IS+N+ I+ + ++ L +F++M D ++PD
Sbjct: 256 TLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLD-CMKPDC 314
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T AS+L+ACA + + GKQ+H+++I+M ++ D+ + +L+++Y KC I +++ F
Sbjct: 315 VTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLT 374
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
NVV WN ++ A+ + +F QM+ G+ P+ T+ +L C G + G
Sbjct: 375 TETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLG 434
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
E + K+ G ++ + LID+ + G+L A ++ L ++ +V T + A
Sbjct: 435 EQIHTQVIKS-GFQFNVYVCSVLIDMYAKHGELDTARGILQR--LREEDVVSWTAMIAGY 491
Query: 484 LRRDV 488
+ D+
Sbjct: 492 TQHDL 496
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 20/169 (11%)
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
+ G+R + T+ + C S+ K++HA + + + + +G+ L+++Y G +
Sbjct: 3 ERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVD 62
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ KLF+++ NV WN +I+ +L L LF M + PD TF +L AC+
Sbjct: 63 NAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACS 122
Query: 416 HAGLVKEGEAYFNSMEKT--------YGISPDIEHFTC--LIDLLGRAG 454
G+A F E+ +G SP C LIDL + G
Sbjct: 123 G------GKAPFQVTEQIHAKIIHHGFGSSP----LVCNPLIDLYSKNG 161
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/580 (35%), Positives = 328/580 (56%), Gaps = 9/580 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
K+++ L+ ++TK L +G LHA +++ G P+ +SNH LNLY+KCG++ K+FD
Sbjct: 75 TKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFD 134
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVK 118
+MS+RN+VSW+++I+G AL F QM + + ++ +S + AC + ++
Sbjct: 135 KMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQF 194
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G Q+H +K G+ FVG++L MY K G SDA + E + V + ++I GFV+
Sbjct: 195 GTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVK 254
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N +K + M+ + D+ L CS G LH +K E F+
Sbjct: 255 NGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFI 314
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEE-KDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
GN + +YSK + A F++ + ++S I EK LS F ++
Sbjct: 315 GNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRR-R 373
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G+ P++FTF S++ ACA A ++HG Q+H +++ +D V + LV+MY KCGL S
Sbjct: 374 GIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHS 433
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+LF+E+ + + ++WNT++ + H LG +A++ F M G+KP++VTF+ LL C+HA
Sbjct: 434 IQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHA 493
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG- 476
G+V++G YF+SMEK YG+ P EH++C+IDLLGRAGKL EAE++ P +P V G
Sbjct: 494 GMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPF--EPNVFGW 551
Query: 477 -TLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
+ L AC++ D+ + A +L L+P + +VLLSN+YA + W DV RKM+KD
Sbjct: 552 CSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDG 611
Query: 536 GLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ K P YS ++++ F V ++SH + EI L L
Sbjct: 612 NMNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNL 651
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 184/379 (48%), Gaps = 11/379 (2%)
Query: 83 EHLLALEF----FSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVG 138
E +++ F F H L + A I A + L KG+Q+HA ++ G +F+
Sbjct: 54 EEIISFSFLKNLFGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLS 113
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL 198
N +++Y K G + ++ + + N+VS+ ++I GF N + ++ F M +G +
Sbjct: 114 NHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEI 173
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKA 258
+F+ + L+ C+ ++ G +HCL VKC FVG+ + +YSK + +A KA
Sbjct: 174 ATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKA 233
Query: 259 FRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
F + KD + W + I D++K L+ + +M D V D S L+AC+ L +
Sbjct: 234 FEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTD-DVFIDQHVLCSTLSACSALKA 292
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN---VVSWNTI 375
GK +HA ++++ + +GNAL +MY+K G + + +F +H + +VS I
Sbjct: 293 SSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQ--IHSDCISIVSLTAI 350
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYG 435
I + AL F ++ GI+P+ TF L+ AC + ++ G + K +
Sbjct: 351 IDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVK-FN 409
Query: 436 ISPDIEHFTCLIDLLGRAG 454
D + L+D+ G+ G
Sbjct: 410 FKRDPFVSSTLVDMYGKCG 428
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/576 (36%), Positives = 327/576 (56%), Gaps = 4/576 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I+SLL CS L++G LH+ +LK G+ D I+ +L+LY K G + A ++FD
Sbjct: 246 TIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSG 305
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
N+V W+ M+ + Q + + + F +M + PN++ + + C + G+
Sbjct: 306 DRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGE 365
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH+ ++K G+ S +V LI MY K G+ A + E ++VS+ ++IAG+V+++
Sbjct: 366 QIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHE 425
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
++ E FK M G+ PD A + C+ + +G +H ++ + N
Sbjct: 426 FCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWN 485
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ LY++ + EA +F IE K+ I+WN I+ + YE+ L VF +M + G +
Sbjct: 486 GLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKM-DQAGAK 544
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ FTF S ++A A LA ++ GKQIHA +I+ + + NAL+++Y KCG I +
Sbjct: 545 YNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMD 604
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F EM RN VSWNTII + H G AL LF+QMK G+KP VTF+G+LTAC+H GLV
Sbjct: 605 FFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLV 664
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+EG YF SM +GI P +H+ C++D+LGRAG+L A+ + ++ P+ D +V TLLS
Sbjct: 665 EEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLS 724
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC++ +++ IGE AK L L+P ++ YVLLSN YA G W RK++KD G++KE
Sbjct: 725 ACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKE 784
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
P S IEV+ F V + H +I L L+
Sbjct: 785 PGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLN 820
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 151/485 (31%), Positives = 264/485 (54%), Gaps = 14/485 (2%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+SS+L C+KT+ Q G +H V K G + V N +++LY +C LA +VF +M
Sbjct: 146 LSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDML 205
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQ 121
+ V+++ +ISGH Q G AL F +M L P+ AS ++AC+ + L KG+Q
Sbjct: 206 YCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQ 265
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H+Y LK G + + SL+ +Y+K G +AL ++ N+V +N ++ + +
Sbjct: 266 LHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDD 325
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
K F++F ML G+ P++F++ L C+ + ++ G +H LT+K +S+ +V
Sbjct: 326 LAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGV 385
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +YSK+ + +A++ +IEEKD++SW + IA ++ L FKEM G+ P
Sbjct: 386 LIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQA-CGIWP 444
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D+ AS ++ACAG+ +V G QIHA + + DV + N LV +YA+CG+ ++ F
Sbjct: 445 DNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSF 504
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ H+ ++WN +I+ A L ALK+F +M G K + TF+ ++A + +K
Sbjct: 505 EAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIK 564
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE----EYTKKFPLGQDPIVLGT 477
+G+ + KT G + + E LI L G+ G + +A+ E TK+ + + T
Sbjct: 565 QGKQIHARVIKT-GYTSETEISNALISLYGKCGSIEDAKMDFFEMTKR-----NEVSWNT 618
Query: 478 LLSAC 482
+++ C
Sbjct: 619 IITCC 623
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 137/439 (31%), Positives = 229/439 (52%), Gaps = 5/439 (1%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+HA + G+ I+ N +++LYAK G + AR+VF+E+S R+ VSW A++SG+ Q G
Sbjct: 64 IHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGL 123
Query: 84 HLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
A+ + +MH ++P Y+ +S +SAC + G+ IH K G+ S +FVGN+
Sbjct: 124 GEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNA 183
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
LIS+Y++ A V+ + + V+FN LI+G + ++ +F M GL PD
Sbjct: 184 LISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPD 243
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+ A L CS DLRKG LH +K + + + +++ LY K I EA + F
Sbjct: 244 SVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFD 303
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ +++ WN + A D K +F M GVRP+ FT+ +L C +
Sbjct: 304 SGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLA-AGVRPNKFTYPCMLRTCTHTGEIG 362
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G+QIH+ I+ D+ V L++MY+K G + + ++ + + ++VVSW ++IA +
Sbjct: 363 LGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYV 422
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
H AL+ F++M+A GI PD++ ++AC V +G + ++ G S D+
Sbjct: 423 QHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQG-SQIHARVYVSGYSADV 481
Query: 441 EHFTCLIDLLGRAGKLLEA 459
+ L+ L R G EA
Sbjct: 482 SIWNGLVYLYARCGISKEA 500
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 188/360 (52%), Gaps = 3/360 (0%)
Query: 103 FASAISACAGI-QSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA 161
FA A+ AC G + +IHA ++ G + +GN LI +Y K G+ A V+ E
Sbjct: 44 FACALRACRGSGRRWPLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEEL 103
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
+ VS+ A+++G+ +N E+ +++ M R G++P + + L C+ + + G
Sbjct: 104 SVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGR 163
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
++H K S FVGN +++LY + A++ F + D +++NT I+ + C
Sbjct: 164 LIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCG 223
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
++ L +F EM G+ PD T AS+LAAC+ + ++ GKQ+H++L++ ++ D +
Sbjct: 224 HGDRALGIFDEMQLS-GLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIME 282
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
+L+++Y K G I + ++F+ NVV WN ++ A+ + +F +M A G++
Sbjct: 283 GSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVR 342
Query: 402 PDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
P+ T+ +L C H G + GE +S+ G D+ LID+ + G L +A+
Sbjct: 343 PNKFTYPCMLRTCTHTGEIGLGEQ-IHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQR 401
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/571 (35%), Positives = 332/571 (58%), Gaps = 4/571 (0%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C L++G +H +V+ G ++ V+N+YAKC ++ A +FD M ER+
Sbjct: 36 LLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERD 95
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHA 124
LV W+ MISG+ Q G +AL +M P+ S + A A + L G +H
Sbjct: 96 LVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHG 155
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
Y L+ G+ S+ V +L+ MY K G S A +++ +VS+N++I G+V++ E
Sbjct: 156 YVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEG 215
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
+F+ ML +G+ P + G L C+ DL +G +H L + KL+S+ V N++++
Sbjct: 216 AMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLIS 275
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+YSK + A F+ + K L+SWN I + + L+ F EM + ++PD F
Sbjct: 276 MYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQS-RNIKPDSF 334
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T S++ A A L+ + K IH +IR L+++V V ALV+MYAKCG I + KLF+ M
Sbjct: 335 TMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMM 394
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
R+V++WN +I + H LG ++++LF++MK IKP+ +TF+ L+AC+H+GLV+EG
Sbjct: 395 NARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGL 454
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRL 484
+F SM+K YGI P ++H+ ++DLLGRAG+L +A ++ +K P+ V G +L AC++
Sbjct: 455 CFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKI 514
Query: 485 RRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYS 544
++V +GE+ A ++F L P +VLL+N+YA+ MWG VA R +++ SGL+K P S
Sbjct: 515 HKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCS 574
Query: 545 MIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
++E+ F SH + +I L+TL
Sbjct: 575 LVEIGNEVHSFYSGTTSHPQSKKIYSYLETL 605
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 195/391 (49%), Gaps = 5/391 (1%)
Query: 74 MISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFG 130
M+ G+ ++ AL FFS+M + P Y F + C L +G++IH + G
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 131 YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFK 190
++ F +++MY K +DA ++ E +LV +N +I+G+ +N + +
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 191 LMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN 250
M +G PD + L + + LR GM +H ++ ES V ++ +YSK
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180
Query: 251 LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
+ A F ++ + ++SWN+ I D E + +F++M D GV+P + T L
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKML-DEGVQPTNVTVMGAL 239
Query: 311 AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVV 370
ACA L ++ GK +H + +++L+ DV V N+L++MY+KC + + +F + ++ +V
Sbjct: 240 HACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLV 299
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSM 430
SWN +I +A + AL F +M++ IKPDS T + ++ A + ++ + +
Sbjct: 300 SWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLV 359
Query: 431 EKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ + + ++ T L+D+ + G + A +
Sbjct: 360 IRRF-LDKNVFVMTALVDMYAKCGAIHTARK 389
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 200/414 (48%), Gaps = 24/414 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I S+L + T+ L+ G+++H VL+ G + V VS ++++Y+KCG + +AR +FD M
Sbjct: 133 TIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGM 192
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
R +VSW++MI G+ Q+G+ A+ F +M + P A+ ACA + L +G+
Sbjct: 193 DHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGK 252
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H + S V NSLISMY K A ++ LVS+NA+I G+ +N
Sbjct: 253 FVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNG 312
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ F M + + PD F+ + + + R+ +H L ++ L+ N FV
Sbjct: 313 CVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMT 372
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y+K I A K F ++ + +I+WN I + + +FKEM ++
Sbjct: 373 ALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKG-TIK 431
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG------NALVNMYAKCGLI 354
P+D TF L+AC+ V+ G + +D G+ A+V++ + G +
Sbjct: 432 PNDITFLCALSACSHSGLVEEGLCFFE-----SMKKDYGIEPTMDHYGAMVDLLGRAGRL 486
Query: 355 SCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSALKLFEQMKATGIKPDS 404
+ ++ +M + + + ++ A H N LG A FE K + PD
Sbjct: 487 NQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKA--AFEIFK---LNPDD 535
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/579 (36%), Positives = 334/579 (57%), Gaps = 12/579 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+L C ++++G +H + K+GI+ DVIV+N +L++Y K +I R++FD+M
Sbjct: 277 TMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKM 336
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM--HLLPNEYIFASAISACAGIQSLVKGQQ 121
R+ VSW+ MI G+ Q G + +++ F +M P+ S + AC + L G+
Sbjct: 337 VLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKY 396
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE----PNLVSFNALIAGFV 177
+H Y + GY + N LI+MY K G LL E F + VS+N++I ++
Sbjct: 397 VHDYMITSGYECDTTASNILINMYAKCG----NLLASQEVFSGMKCKDSVSWNSMINVYI 452
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+N ++ ++FK+M + + PD ++ L + + DL G LHC K SN
Sbjct: 453 QNGSFDEAMKLFKMM-KTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIV 511
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V NT++ +Y+K +G++ K F ++ +D+I+WNT IA+C H D GL + M +
Sbjct: 512 VSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTE- 570
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
GV PD T SIL C+ LA+ + GK+IH + ++ L DV VGN L+ MY+KCG + S
Sbjct: 571 GVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNS 630
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+++F M ++VV+W +I+A + G A++ F +M+A GI PD V F+ ++ AC+H+
Sbjct: 631 FQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHS 690
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV+EG YF+ M+K Y I P IEH+ C++DLL R+ L +AE++ PL D + G
Sbjct: 691 GLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGA 750
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LLSACR+ D I +R+++++ L P T YVL+SN+YA+ G W V RK +K GL
Sbjct: 751 LLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGL 810
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
KK+P S +E+Q F + E+N +L L+
Sbjct: 811 KKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLA 849
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 147/499 (29%), Positives = 253/499 (50%), Gaps = 12/499 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
SIS L + T L + LH+ ++ +G+ VI S ++ YA + VF
Sbjct: 77 SISRALASAATTTQLHK---LHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLA 133
Query: 64 S-ERNLVSWSAMISGHHQAGEHLLALEFFSQ---MHLLPNEYIFASAISACAGIQSLVKG 119
S N+ W+++I G AL +S+ + L P+ Y F S I+ACAG+
Sbjct: 134 SPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMA 193
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ IH L G+ S ++GN+LI MY + A V+ E ++VS+N+LI+G+ N
Sbjct: 194 KSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNAN 253
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ E++ G++PD ++ + L C + +G I+H L K ++ + V
Sbjct: 254 GYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVN 313
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N ++++Y KFN + + + F + +D +SWNT I S YE+ + +F EM N
Sbjct: 314 NGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ--F 371
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+PD T SIL AC L ++ GK +H ++I D N L+NMYAKCG + S +
Sbjct: 372 KPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQE 431
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F+ M ++ VSWN++I + + A+KLF+ MK T +KPDSVT++ LL+ G
Sbjct: 432 VFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMK-TDVKPDSVTYVMLLSMSTQLGD 490
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
+ G+ + K G + +I L+D+ + G++ ++ + + +D I T++
Sbjct: 491 LXLGKELHCDLAKM-GFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMK-ARDIITWNTII 548
Query: 480 SACRLRRDVVIGERLAKQL 498
++C D +G R+ ++
Sbjct: 549 ASCVHSEDCNLGLRMISRM 567
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 5/178 (2%)
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN-EM 364
F+SI A A A+ ++H+ +I + L+ V L+ YA + S+ +F
Sbjct: 75 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 134
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK-EG 423
NV WN+II A ++ L AL L+ + + ++PD+ TF ++ AC AGL+ E
Sbjct: 135 PSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC--AGLLDFEM 192
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+ G D+ LID+ R L +A + ++ PL +D + +L+S
Sbjct: 193 AKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPL-RDVVSWNSLISG 249
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/575 (35%), Positives = 332/575 (57%), Gaps = 4/575 (0%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
++L+ S AL+ G ++H+ +L G + D+ V ++ +YAKCG R+VF+++ R
Sbjct: 350 NVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNR 409
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
+L++W+ MI G + G A E + QM ++PN+ + ++AC +L G++IH
Sbjct: 410 DLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIH 469
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ +K G+ V N+LISMY + G DA L++ + +++S+ A+I G ++
Sbjct: 470 SRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGA 529
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ VF+ M + GL P+R ++ L CS L G +H ++ L ++ V NT++
Sbjct: 530 EALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLV 589
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+YS + +A + F + ++D++++N I + ++ L +F + + G++PD
Sbjct: 590 NMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRL-QEEGLKPDK 648
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T+ ++L ACA S++ K+IH+ +++ D +GNALV+ YAKCG S + +F++
Sbjct: 649 VTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDK 708
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M+ RNV+SWN II A H G L+LFE+MK GIKPD VTF+ LL+AC+HAGL++EG
Sbjct: 709 MMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEG 768
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
YF SM + +GI+P IEH+ C++DLLGRAG+L E E K P + + G LL ACR
Sbjct: 769 RRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACR 828
Query: 484 LRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSY 543
+ +V + ER A+ L P + YV LS++YA+ GMW A RK+++ G+ KEP
Sbjct: 829 IHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGR 888
Query: 544 SMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSLA 578
S IEV F + SH + +I L L+ A
Sbjct: 889 SWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHA 923
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 138/414 (33%), Positives = 235/414 (56%), Gaps = 4/414 (0%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C AL+ G +H +K + DV V+N +LN+YAKCG + AR+VFD+M ++
Sbjct: 250 LLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKS 309
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
+VSW+ +I G+ G +A E F +M ++PN + + ++A +G +L G+ +H+
Sbjct: 310 VVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHS 369
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ L G+ S VG +L+ MY K G D V+ + +L+++N +I G E E+
Sbjct: 370 HILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEE 429
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
E++ M R+G++P++ ++ L C L G +H VK + V N +++
Sbjct: 430 ASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALIS 489
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y++ I +A F + KD+ISW I + + L+VF++M G++P+
Sbjct: 490 MYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQ-AGLKPNRV 548
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T+ SIL AC+ A++ G++IH +I L D V N LVNMY+ CG + + ++F+ M
Sbjct: 549 TYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRM 608
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
R++V++N +I +A H LG ALKLF++++ G+KPD VT+I +L AC ++G
Sbjct: 609 TQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSG 662
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 239/459 (52%), Gaps = 7/459 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM--SE 65
+L C + K L G +H +++ D N ++N+Y +CG + AR+V++++ +E
Sbjct: 147 MLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTE 206
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
R + SW+AM+ G+ Q G AL+ +M L +S+C +L G++I
Sbjct: 207 RTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREI 266
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H ++K V N +++MY K G +A V+ + ++VS+ +I G+ +
Sbjct: 267 HVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHS 326
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E FE+F+ M ++G++P+R ++ L S L+ G +H + ES+ VG +
Sbjct: 327 EIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTAL 386
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y+K + + F + +DLI+WNT I + ++E+ ++ +M + G+ P+
Sbjct: 387 VKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQRE-GMMPN 445
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
T+ +L AC ++ G++IH+ +++ D+ V NAL++MYA+CG I + LFN
Sbjct: 446 KITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFN 505
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+M+ ++++SW +I A LG AL +F+ M+ G+KP+ VT+ +L AC+ +
Sbjct: 506 KMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDW 565
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
G + + G++ D L+++ G + +A +
Sbjct: 566 GRRIHQQVIEA-GLATDAHVANTLVNMYSMCGSVKDARQ 603
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 192/375 (51%), Gaps = 4/375 (1%)
Query: 88 LEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMK 147
+++ Q N + + C ++ LV G+++H + ++ + N+LI+MY++
Sbjct: 129 VQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQ 188
Query: 148 VGYSSDALLVYGEA--FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA 205
G +A V+ + E + S+NA++ G+V+ E+ ++ + M + GL R +
Sbjct: 189 CGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTM 248
Query: 206 GGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK 265
L C + L G +H +K +L + V N I+ +Y+K I EA + F +E K
Sbjct: 249 RLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETK 308
Query: 266 DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
++SW I + C E +F++M + GV P+ T+ ++L A +G A+++ GK +
Sbjct: 309 SVVSWTIIIGGYADCGHSEIAFEIFQKMQQE-GVVPNRITYINVLNAFSGPAALKWGKTV 367
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
H+H++ D+ VG ALV MYAKCG ++F ++++R++++WNT+I A
Sbjct: 368 HSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNW 427
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
A +++ QM+ G+ P+ +T++ LL AC + + G + + K G DI
Sbjct: 428 EEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKD-GFMFDISVQNA 486
Query: 446 LIDLLGRAGKLLEAE 460
LI + R G + +A
Sbjct: 487 LISMYARCGSIKDAR 501
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 138/227 (60%), Gaps = 7/227 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L+ CS AL G +H V++ G+ D V+N ++N+Y+ CG + AR+VFD M
Sbjct: 549 TYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRM 608
Query: 64 SERNLVSWSAMISGH--HQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
++R++V+++AMI G+ H G+ AL+ F ++ L P++ + + ++ACA SL
Sbjct: 609 TQRDIVAYNAMIGGYAAHNLGKE--ALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEW 666
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
++IH+ LK GY S + +GN+L+S Y K G SDALLV+ + + N++S+NA+I G +
Sbjct: 667 AKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQ 726
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHC 225
+ + + ++F+ M +G+ PD +F L CS + L +G C
Sbjct: 727 HGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFC 773
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 149/299 (49%), Gaps = 5/299 (1%)
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
++ +V + + +QG + + L+ C DL G +H ++ + + N +
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182
Query: 243 MALYSKFNLIGEAEKAFRLIE--EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+ +Y + I EA + + + E+ + SWN + E+ L + +EM HG+
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQ-HGLA 241
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
T +L++C ++++ G++IH ++ RL DV V N ++NMYAKCG I + ++
Sbjct: 242 LGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREV 301
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F++M ++VVSW II +A+ A ++F++M+ G+ P+ +T+I +L A + +
Sbjct: 302 FDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAAL 361
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
K G+ + + G D+ T L+ + + G + + +K + +D I T++
Sbjct: 362 KWGKTVHSHILNA-GHESDLAVGTALVKMYAKCGSYKDCRQVFEKL-VNRDLIAWNTMI 418
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/575 (35%), Positives = 329/575 (57%), Gaps = 4/575 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + LL C L++G +H ++ G +V V+N+YAKC + A K+FD M
Sbjct: 177 NFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRM 236
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
ER+LV W+ +ISG+ Q G ALE +M P+ S + A A + SL G+
Sbjct: 237 PERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGR 296
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IH YS++ G+ S V +L+ MY K G A L++ +VS+N++I G+V+N
Sbjct: 297 SIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNG 356
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
P E+F+ M+ + + + G L C+ D+ +G +H L + +L S+ V N
Sbjct: 357 DPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMN 416
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++++YSK + A + F ++ K L+SWN I + + + F +M ++
Sbjct: 417 SLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQL-QNIK 475
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD FT S++ A A L+ + K IH +IR L+++V V ALV+MYAKCG + + KL
Sbjct: 476 PDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKL 535
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+ M R+V +WN +I + H LG +AL+LFE+MK IKP+ VTF+ +L+AC+H+GLV
Sbjct: 536 FDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLV 595
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+EG YF SM+K YG+ P ++H+ ++DLLGRA +L EA ++ +K P+ V G +L
Sbjct: 596 EEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLG 655
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ ++V +GE+ A ++F L P +VLL+N+YA+ MW VA R ++ G++K
Sbjct: 656 ACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKT 715
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P +S++E+Q F SH + +I L+TL
Sbjct: 716 PGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETL 750
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/457 (25%), Positives = 219/457 (47%), Gaps = 8/457 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C+ K L Q I L ++K G+ + + +++L+ K G + A +VF + ++
Sbjct: 83 LLELCTSMKELHQFIPL---IIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKI 139
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
+ M+ G+ + A+ FF +M + P Y F + C L KG++IH
Sbjct: 140 DELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHC 199
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ G+AS F +++MY K +A ++ E +LV +N +I+G+ +N +
Sbjct: 200 QLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKT 259
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
E+ M +G PD + L + LR G +H +++ ES V ++
Sbjct: 260 ALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVD 319
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+YSK +G A F + K ++SWN+ I D + +F++M D V +
Sbjct: 320 MYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMM-DEQVEMTNV 378
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T L ACA L V+ G+ +H L ++ L DV V N+L++MY+KC + + ++F +
Sbjct: 379 TVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENL 438
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
H+ +VSWN +I +A + A+ F +M+ IKPDS T + ++ A ++ + +
Sbjct: 439 QHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAK 498
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ + + + ++ T L+D+ + G + A +
Sbjct: 499 -WIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARK 534
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/568 (36%), Positives = 334/568 (58%), Gaps = 4/568 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++SLL C+ AL +G+ LH+ +K G+ D+I+ +L+LY+KC + A K F
Sbjct: 364 TVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTT 423
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
N+V W+ M+ + Q + E F QM + +PN++ + S + C + +L G+
Sbjct: 424 ETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGE 483
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH + +K G+ +V + LI MY K G + AL + E ++VS+ A+IAG+V++
Sbjct: 484 QIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHD 543
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ ++F+ M +G+ D FA + C+ LR+G +H + ++ + N
Sbjct: 544 MFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINN 603
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++LY++ I EA AF I +K+ ISWN+ ++ + +E+ L VF M
Sbjct: 604 ALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEA-E 662
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ FT+ S ++A A LA+++ G+QIH+ +++ + + V N+L+++YAK G IS +++
Sbjct: 663 VNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWRE 722
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN+M RNV+SWN +I ++ H G AL+LFE+MK GI P+ VTF+G+L+AC+H GLV
Sbjct: 723 FNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLV 782
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
KEG YF SM K + + P EH+ C++DLLGRAG+L A EY K+ P+ D ++ TLLS
Sbjct: 783 KEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLS 842
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC + +++ IGER A L L+P ++ YVL+SN+YA W +RK++KD G+KKE
Sbjct: 843 ACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKE 902
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
P S IEV+ F + H +I
Sbjct: 903 PGRSWIEVKNAVHAFYAGDKLHPLTNQI 930
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 132/439 (30%), Positives = 234/439 (53%), Gaps = 5/439 (1%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+H+ G +V+N +++LY+K G + A+KVF+ + +++V+W AMISG Q G
Sbjct: 182 VHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGL 241
Query: 84 HLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
A+ F MH + P Y+ +S +SA IQ G+Q+H +K+G+ S ++V N
Sbjct: 242 EEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNG 301
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
L+++Y + A ++ + VS+N+LI+G V+ ++ E+F M R L PD
Sbjct: 302 LVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPD 361
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+ A L C+ L KGM LH +K + ++ + +++ LYSK + A K F
Sbjct: 362 CITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFL 421
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
E ++++ WN + A + +F++M + G+ P+ FT+ SIL C L ++
Sbjct: 422 TTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQME-GMIPNQFTYPSILRTCTSLGALY 480
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G+QIH H+I+ +V V + L++MYAK G ++ + ++ + +VVSW +IA +
Sbjct: 481 LGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYV 540
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
H + AL+LFE+M+ GI+ D++ F ++AC +++G+ ++ G D+
Sbjct: 541 QHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQ-IHAQSYAAGFGADL 599
Query: 441 EHFTCLIDLLGRAGKLLEA 459
LI L R G++ EA
Sbjct: 600 SINNALISLYARCGRIQEA 618
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 132/458 (28%), Positives = 247/458 (53%), Gaps = 5/458 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+SS+L +K + + G LH V+K G + V N ++ LY++ K+I A ++F M+
Sbjct: 264 LSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMN 323
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQ 121
R+ VS++++ISG Q G ALE F++M L P+ AS +SACA + +L KG Q
Sbjct: 324 SRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQ 383
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H++++K G ++ + SL+ +Y K A + N+V +N ++ + +
Sbjct: 384 LHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDN 443
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
FE+F+ M +G++P++F++ L C+ L G +H +K + N +V +
Sbjct: 444 LSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSV 503
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y+K+ + A + R + E D++SW IA + + L +F+EM G++
Sbjct: 504 LIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEY-RGIQF 562
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D+ FAS ++ACAG+ +++ G+QIHA D+ + NAL+++YA+CG I +Y F
Sbjct: 563 DNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAF 622
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
++ +N +SWN++++ A AL++F +M T + + T+ ++A +K
Sbjct: 623 EKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIK 682
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+G+ + + KT G + E LI L ++G + +A
Sbjct: 683 QGQQIHSMVLKT-GYDSEREVSNSLISLYAKSGSISDA 719
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 241/485 (49%), Gaps = 8/485 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C + +L + + LH + K G + ++ + +++ Y + G A KVFDE S R+
Sbjct: 64 LLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRS 123
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQ-SLVKGQQIH 123
+ SW+ MI + F +M + PN Y FA + AC G + +Q+H
Sbjct: 124 VFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVH 183
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ + +G+ S V N LI +Y K GY A V+ ++V++ A+I+G +N E
Sbjct: 184 SRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEE 243
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ +F M + P + + L + G LHCL +K S +V N ++
Sbjct: 244 EAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLV 303
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
ALYS+ + AE+ F + +D +S+N+ I+ ++ L +F +M D ++PD
Sbjct: 304 ALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRD-CLKPDC 362
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T AS+L+ACA + ++ G Q+H+H I+ ++ D+ + +L+++Y+KC + ++K F
Sbjct: 363 ITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLT 422
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
N+V WN ++ A+ + ++F QM+ G+ P+ T+ +L C G + G
Sbjct: 423 TETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLG 482
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
E + KT G ++ + LID+ + G+L A ++ P +D +V T + A
Sbjct: 483 EQIHTHVIKT-GFQLNVYVCSVLIDMYAKYGQLALALRILRRLP--EDDVVSWTAMIAGY 539
Query: 484 LRRDV 488
++ D+
Sbjct: 540 VQHDM 544
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 186/377 (49%), Gaps = 5/377 (1%)
Query: 88 LEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMK 147
+ F + + N + + C SL + ++H K G+ + +SL+ Y +
Sbjct: 46 MNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFR 105
Query: 148 VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGG 207
G A+ V+ E ++ S+N +I FV + + F +F+ ML +G+ P+ ++FAG
Sbjct: 106 HGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGV 165
Query: 208 LEICSVSNDLRKGMI--LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK 265
L+ C V D+ + +H T +S+P V N ++ LYSK I A+K F I K
Sbjct: 166 LKAC-VGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMK 224
Query: 266 DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
D+++W I+ S E+ + +F +M + P + +S+L+A + + G+Q+
Sbjct: 225 DIVTWVAMISGLSQNGLEEEAILLFCDMHASE-IFPTPYVLSSVLSASTKIQLFELGEQL 283
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
H +I+ + + V N LV +Y++ + + ++F+ M R+ VS+N++I+
Sbjct: 284 HCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFS 343
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
AL+LF +M+ +KPD +T LL+AC G + +G + K G+S DI
Sbjct: 344 DRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKA-GMSADIILEGS 402
Query: 446 LIDLLGRAGKLLEAEEY 462
L+DL + + A ++
Sbjct: 403 LLDLYSKCADVETAHKF 419
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 128/283 (45%), Gaps = 3/283 (1%)
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
Q K ++ M +G+ + ++ LE C S L + M LHC K + P +
Sbjct: 37 QGKSKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLI 96
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++++ Y + A K F + + SWN I + +F+ M + G+
Sbjct: 97 DSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAE-GI 155
Query: 300 RPDDFTFASILAAC-AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
P+ +TFA +L AC G + + KQ+H+ + V N L+++Y+K G I +
Sbjct: 156 TPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAK 215
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
K+FN + +++V+W +I+ + + L A+ LF M A+ I P +L+A
Sbjct: 216 KVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQ 275
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
L + GE + + +G + L+ L R+ KL+ AE
Sbjct: 276 LFELGEQ-LHCLVIKWGFHSETYVCNGLVALYSRSRKLISAER 317
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 106/241 (43%), Gaps = 11/241 (4%)
Query: 284 EKGLSVFKEMSN---DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV 340
E+G S ++ N + GVR + + +L C S+ ++H + + + + +
Sbjct: 36 EQGKSKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLL 95
Query: 341 GNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGI 400
++LV+ Y + G + K+F+E +R+V SWN +I + LF +M A GI
Sbjct: 96 IDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGI 155
Query: 401 KPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
P+ TF G+L AC + +S YG LIDL + G + A+
Sbjct: 156 TPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAK 215
Query: 461 EYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLF---HLQPTTTSPYVLLSNLYA 517
+ + +D + ++S L ++ + E A LF H +PYVL S L A
Sbjct: 216 KVFNCICM-KDIVTWVAMISG--LSQNGL--EEEAILLFCDMHASEIFPTPYVLSSVLSA 270
Query: 518 S 518
S
Sbjct: 271 S 271
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/573 (36%), Positives = 328/573 (57%), Gaps = 6/573 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +L C L +G +H V++ G + DV V N ++ +Y KCG + AR VFD+M
Sbjct: 209 TFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKM 268
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
R+ +SW+AMISG+ + G L L F M + P+ S I+AC + G+
Sbjct: 269 PNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGR 328
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH Y L+ + + NSLI MY VG +A V+ +LVS+ A+I+G+
Sbjct: 329 QIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCL 388
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
P+K E +K+M +G++PD + A L CS +L GM LH + + L S V N
Sbjct: 389 MPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVAN 448
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +Y+K I +A + F EK+++SW + I + L F+EM ++
Sbjct: 449 SLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIRR--LK 506
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P+ T +L+ACA + ++ GK+IHAH +R ++ D + NA+++MY +CG + ++K
Sbjct: 507 PNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQ 566
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F + H V SWN ++ +A G A +LF++M + + P+ VTFI +L AC+ +G+V
Sbjct: 567 FFSVDHE-VTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMV 625
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG YFNSM+ Y I P+++H+ C++DLLGR+GKL EA E+ +K P+ DP V G LL+
Sbjct: 626 AEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLN 685
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
+CR+ V +GE A+ +F T+ Y+LLSNLYA +G W VA RKM++ +GL +
Sbjct: 686 SCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEVRKMMRQNGLIVD 745
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLK 573
P S +EV+GT F ++ H +I EIN +L+
Sbjct: 746 PGCSWVEVKGTVHAFLSSDNFHPQIKEINALLE 778
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 246/453 (54%), Gaps = 6/453 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+L+ C +A ++G +++ V + + N +L+++ + G ++ A VF M +R
Sbjct: 111 ALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKR 170
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIH 123
NL SW+ ++ G+ +AG AL+ + +M + P+ Y F + C G+ +LV+G++IH
Sbjct: 171 NLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIH 230
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ +++G+ S V N+LI+MY+K G + A LV+ + + +S+NA+I+G+ EN
Sbjct: 231 VHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCL 290
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+G +F +M++ + PD + + C + D R G +H ++ + +P + N+++
Sbjct: 291 EGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLI 350
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+YS LI EAE F E +DL+SW I+ +C +K L +K M + G+ PD+
Sbjct: 351 PMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAE-GIMPDE 409
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T A +L+AC+ L ++ G +H + L V N+L++MYAKC I + ++F+
Sbjct: 410 ITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHS 469
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
L +N+VSW +II + AL F +M +KP+SVT + +L+AC G + G
Sbjct: 470 TLEKNIVSWTSIILGLRINNRCFEALFFFREM-IRRLKPNSVTLVCVLSACARIGALTCG 528
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+ +T G+S D ++D+ R G++
Sbjct: 529 KEIHAHALRT-GVSFDGFMPNAILDMYVRCGRM 560
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 89/181 (49%), Gaps = 4/181 (2%)
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
+D + +++ C + + G ++++++ + + +GNAL++M+ + G + ++ +F
Sbjct: 105 EDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVF 164
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC-NHAGLV 420
M RN+ SWN ++ +A L AL L+ +M G+KPD TF +L C LV
Sbjct: 165 GRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLV 224
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+ E + + + YG D++ LI + + G + A K P +D I ++S
Sbjct: 225 RGREIHVHVIR--YGFESDVDVVNALITMYVKCGDVNTARLVFDKMP-NRDRISWNAMIS 281
Query: 481 A 481
Sbjct: 282 G 282
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/568 (36%), Positives = 334/568 (58%), Gaps = 4/568 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++SLL C+ AL +G+ LH+ +K G+ D+I+ +L+LY+KC + A K F
Sbjct: 364 TVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXT 423
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
N+V W+ M+ + Q + E F QM + +PN++ + S + C + +L G+
Sbjct: 424 ETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGE 483
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH + +K G+ +V + LI MY K G + AL + E ++VS+ A+IAG+V++
Sbjct: 484 QIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHD 543
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ ++F+ M +G+ D FA + C+ LR+G +H + ++ + N
Sbjct: 544 MFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINN 603
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++LY++ I EA AF I +K+ ISWN+ ++ + +E+ L VF M
Sbjct: 604 ALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEA-E 662
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ FT+ S ++A A LA+++ G+QIH+ +++ + + V N+L+++YAK G IS +++
Sbjct: 663 VNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWRE 722
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN+M RNV+SWN +I ++ H G AL+LFE+MK GI P+ VTF+G+L+AC+H GLV
Sbjct: 723 FNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLV 782
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
KEG YF SM K + + P EH+ C++DLLGRAG+L A EY K+ P+ D ++ TLLS
Sbjct: 783 KEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLS 842
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC + +++ IGER A L L+P ++ YVL+SN+YA W +RK++KD G+KKE
Sbjct: 843 ACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKE 902
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
P S IEV+ F + H +I
Sbjct: 903 PGRSWIEVKNAVHAFYAGDKLHPLTNQI 930
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 132/439 (30%), Positives = 234/439 (53%), Gaps = 5/439 (1%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+H+ G +V+N +++LY+K G + A+KVF+ + +++V+W AMISG Q G
Sbjct: 182 VHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGL 241
Query: 84 HLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
A+ F MH + P Y+ +S +SA IQ G+Q+H +K+G+ S ++V N
Sbjct: 242 EEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNG 301
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
L+++Y + A ++ + VS+N+LI+G V+ ++ E+F M R L PD
Sbjct: 302 LVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPD 361
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+ A L C+ L KGM LH +K + ++ + +++ LYSK + A K F
Sbjct: 362 CITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFL 421
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
E ++++ WN + A + +F++M + G+ P+ FT+ SIL C L ++
Sbjct: 422 XTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQME-GMIPNQFTYPSILRTCTSLGALY 480
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G+QIH H+I+ +V V + L++MYAK G ++ + ++ + +VVSW +IA +
Sbjct: 481 LGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYV 540
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
H + AL+LFE+M+ GI+ D++ F ++AC +++G+ ++ G D+
Sbjct: 541 QHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQ-IHAQSYAAGFGADL 599
Query: 441 EHFTCLIDLLGRAGKLLEA 459
LI L R G++ EA
Sbjct: 600 SINNALISLYARCGRIQEA 618
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 132/458 (28%), Positives = 247/458 (53%), Gaps = 5/458 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+SS+L +K + + G LH V+K G + V N ++ LY++ K+I A ++F M+
Sbjct: 264 LSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMN 323
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQ 121
R+ VS++++ISG Q G ALE F++M L P+ AS +SACA + +L KG Q
Sbjct: 324 SRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQ 383
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H++++K G ++ + SL+ +Y K A + N+V +N ++ + +
Sbjct: 384 LHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDN 443
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
FE+F+ M +G++P++F++ L C+ L G +H +K + N +V +
Sbjct: 444 LSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSV 503
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y+K+ + A + R + E D++SW IA + + L +F+EM G++
Sbjct: 504 LIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEY-RGIQF 562
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D+ FAS ++ACAG+ +++ G+QIHA D+ + NAL+++YA+CG I +Y F
Sbjct: 563 DNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAF 622
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
++ +N +SWN++++ A AL++F +M T + + T+ ++A +K
Sbjct: 623 EKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIK 682
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+G+ + + KT G + E LI L ++G + +A
Sbjct: 683 QGQQIHSMVLKT-GYDSEREVSNSLISLYAKSGSISDA 719
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 241/485 (49%), Gaps = 8/485 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C + +L + + LH + K G + ++ + +++ Y + G A KVFDE S R+
Sbjct: 64 LLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRS 123
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQ-SLVKGQQIH 123
+ SW+ MI + F +M + PN Y FA + AC G + +Q+H
Sbjct: 124 VFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVH 183
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ + +G+ S V N LI +Y K GY A V+ ++V++ A+I+G +N E
Sbjct: 184 SRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEE 243
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ +F M + P + + L + G LHCL +K S +V N ++
Sbjct: 244 EAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLV 303
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
ALYS+ + AE+ F + +D +S+N+ I+ ++ L +F +M D ++PD
Sbjct: 304 ALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRD-CLKPDC 362
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T AS+L+ACA + ++ G Q+H+H I+ ++ D+ + +L+++Y+KC + ++K F
Sbjct: 363 ITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLX 422
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
N+V WN ++ A+ + ++F QM+ G+ P+ T+ +L C G + G
Sbjct: 423 TETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLG 482
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
E + KT G ++ + LID+ + G+L A ++ P +D +V T + A
Sbjct: 483 EQIHTHVIKT-GFQLNVYVCSVLIDMYAKYGQLALALRILRRLP--EDDVVSWTAMIAGY 539
Query: 484 LRRDV 488
++ D+
Sbjct: 540 VQHDM 544
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 186/377 (49%), Gaps = 5/377 (1%)
Query: 88 LEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMK 147
+ F + + N + + C SL + ++H K G+ + +SL+ Y +
Sbjct: 46 MNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFR 105
Query: 148 VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGG 207
G A+ V+ E ++ S+N +I FV + + F +F+ ML +G+ P+ ++FAG
Sbjct: 106 HGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGV 165
Query: 208 LEICSVSNDLRKGMI--LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK 265
L+ C V D+ + +H T +S+P V N ++ LYSK I A+K F I K
Sbjct: 166 LKAC-VGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMK 224
Query: 266 DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
D+++W I+ S E+ + +F +M + P + +S+L+A + + G+Q+
Sbjct: 225 DIVTWVAMISGLSQNGLEEEAILLFCDMHASE-IFPTPYVLSSVLSASTKIQLFELGEQL 283
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
H +I+ + + V N LV +Y++ + + ++F+ M R+ VS+N++I+
Sbjct: 284 HCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFS 343
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
AL+LF +M+ +KPD +T LL+AC G + +G + K G+S DI
Sbjct: 344 DRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKA-GMSADIILEGS 402
Query: 446 LIDLLGRAGKLLEAEEY 462
L+DL + + A ++
Sbjct: 403 LLDLYSKCADVETAHKF 419
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 128/283 (45%), Gaps = 3/283 (1%)
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
Q K ++ M +G+ + ++ LE C S L + M LHC K + P +
Sbjct: 37 QGKSKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLI 96
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++++ Y + A K F + + SWN I + +F+ M + G+
Sbjct: 97 DSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAE-GI 155
Query: 300 RPDDFTFASILAAC-AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
P+ +TFA +L AC G + + KQ+H+ + V N L+++Y+K G I +
Sbjct: 156 TPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAK 215
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
K+FN + +++V+W +I+ + + L A+ LF M A+ I P +L+A
Sbjct: 216 KVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQ 275
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
L + GE + + +G + L+ L R+ KL+ AE
Sbjct: 276 LFELGEQ-LHCLVIKWGFHSETYVCNGLVALYSRSRKLISAER 317
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 106/241 (43%), Gaps = 11/241 (4%)
Query: 284 EKGLSVFKEMSN---DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV 340
E+G S ++ N + GVR + + +L C S+ ++H + + + + +
Sbjct: 36 EQGKSKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLL 95
Query: 341 GNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGI 400
++LV+ Y + G + K+F+E +R+V SWN +I + LF +M A GI
Sbjct: 96 IDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGI 155
Query: 401 KPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
P+ TF G+L AC + +S YG LIDL + G + A+
Sbjct: 156 TPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAK 215
Query: 461 EYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLF---HLQPTTTSPYVLLSNLYA 517
+ + +D + ++S L ++ + E A LF H +PYVL S L A
Sbjct: 216 KVFNCICM-KDIVTWVAMISG--LSQNGL--EEEAILLFCDMHASEIFPTPYVLSSVLSA 270
Query: 518 S 518
S
Sbjct: 271 S 271
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/579 (34%), Positives = 332/579 (57%), Gaps = 6/579 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+ ++ LL +CSK QG+ +HAA + MG D+I++N ++++Y KC ++ LA VFD
Sbjct: 5 QRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDR 64
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
M ERN+VSW+A++ G+ Q G +L +M + PNE+ F++++ AC + + G
Sbjct: 65 MLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENG 124
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
QIH +K G+ +S VGN+ I MY K G A V+ + NLVS+NA+IAG
Sbjct: 125 MQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHE 184
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHC--LTVKCKLESNPF 237
K +F+ M QG +PD F+F L+ C +R G +H +T +
Sbjct: 185 GNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNI 244
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+ + I+ LY+K + EA+K F IE+K+LISW+ I + + + + +F+++ +
Sbjct: 245 IASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQL-RES 303
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
D F + ++ A LA V+ GKQ+H +++++ D+ V N++++MY KCGL +
Sbjct: 304 VSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEA 363
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+LF+EM RNVVSW +I + H LG A+ LF +M+ GI+ D V ++ LL+AC+H+
Sbjct: 364 ERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHS 423
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GL++E + YF+ + + + P+IEH+ C++D+LGRAG+L EA+ + L + + T
Sbjct: 424 GLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQT 483
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LLSACR+ ++ IG + + LF + YV++SN+YA G W + RK++K GL
Sbjct: 484 LLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGL 543
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
KKE S +E+ F + +H +I+ MLK +
Sbjct: 544 KKEAGQSWVEINKEIHFFYGGDDTHPLTEKIHEMLKEME 582
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 137/266 (51%), Gaps = 4/266 (1%)
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
+ +R A L CS + +G+ +H V + + N ++ +Y K + + A
Sbjct: 1 MSERQRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACS 60
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F + E++++SW + + + L++ EM GV+P++FTF++ L AC L
Sbjct: 61 VFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYS-GVKPNEFTFSTSLKACGALG 119
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
V++G QIH ++ VGNA ++MY+KCG I + ++FN+M RN+VSWN +IA
Sbjct: 120 VVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIA 179
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
H + G +L LF++M+ G PD TF L AC G ++ G S+ T G
Sbjct: 180 GHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASL-ITRGFP 238
Query: 438 PDIEHF--TCLIDLLGRAGKLLEAEE 461
I + + ++DL + G L EA++
Sbjct: 239 ISIRNIIASAIVDLYAKCGYLFEAQK 264
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/578 (36%), Positives = 331/578 (57%), Gaps = 7/578 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+S L C ++ G SLH +K V V + ++++Y K GK+ VF EM
Sbjct: 71 LSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMP 130
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQQ 121
RN+VSW+A+I+G +AG + AL +FS M + + Y F+SA+ ACA +L G++
Sbjct: 131 LRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGRE 190
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
IH +LK G+ ++SFV N+L +MY K G L ++ + ++VS+ +I V+ Q
Sbjct: 191 IHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQ 250
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
E + F+ M + P+ F+FA + C+ + G LH ++ L + V N+
Sbjct: 251 EENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANS 310
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
IMA+YSK + A F+ + +D+ISW+T I+ + E+ M + G RP
Sbjct: 311 IMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRRE-GPRP 369
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
++F FAS+L+ C +A ++ GKQ+HAH++ + L Q+ V +AL+NMY+KCG I + K+F
Sbjct: 370 NEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIF 429
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+E + N+VSW +I +A H A+ LF+++ G++PDSVTFI +L AC+HAGLV
Sbjct: 430 DEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVD 489
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
G YFNS+ K + I P +H+ C+IDLL RAG+L +AE + P +D +V TLL A
Sbjct: 490 LGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRA 549
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
CR+ DV G+R A+++ L P ++ L+N+YA+ G W + A RKM+K G+ KEP
Sbjct: 550 CRIHGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAAEVRKMMKSKGVVKEP 609
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSLAA 579
+S I+ + F + SH + GE Y+ L L A
Sbjct: 610 GWSWIKFKDRVSAFVSGDRSHPE-GE--YIYDVLDLLA 644
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 230/425 (54%), Gaps = 6/425 (1%)
Query: 41 NHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP-- 98
N VL K G + AR++FD+M +R+ +SW+ +ISG+ AL FS+M + P
Sbjct: 5 NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGL 64
Query: 99 --NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALL 156
+ +I + A+ AC S+ G+ +H YS+K + + FVG++L+ MYMK+G + +
Sbjct: 65 HMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCI 124
Query: 157 VYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSND 216
V+ E N+VS+ A+IAG V ++ F M Q + D ++F+ L+ C+ S
Sbjct: 125 VFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGA 184
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
L G +HC T+K + FV NT+ +Y+K + + F + ++D++SW T I +
Sbjct: 185 LNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMS 244
Query: 277 CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
E + F+ M + V P++FTFA++++ CA L ++ G+Q+HAH+IR L
Sbjct: 245 NVQIGQEENAVKAFRRM-RETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVD 303
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
+ V N+++ MY+KC + + +F + R+++SW+T+I+ +A G A M+
Sbjct: 304 SLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMR 363
Query: 397 ATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
G +P+ F +L+ C + ++++G+ ++ G+ + + LI++ + G +
Sbjct: 364 REGPRPNEFAFASVLSVCGNMAILEQGKQ-LHAHVLCVGLEQNTMVQSALINMYSKCGSI 422
Query: 457 LEAEE 461
EA +
Sbjct: 423 KEASK 427
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 124/442 (28%), Positives = 219/442 (49%), Gaps = 16/442 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS L C+ + AL G +H LK G V+N + +Y KCGK+ ++F+ M
Sbjct: 171 TFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESM 230
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
++R++VSW+ +I + Q G+ A++ F +M + PNE+ FA+ IS CA + + G+
Sbjct: 231 TQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGE 290
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HA+ ++ G V NS+++MY K A V+ +++S++ +I+G+ +
Sbjct: 291 QLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGG 350
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E+ F+ M R+G P+ F+FA L +C L +G LH + LE N V +
Sbjct: 351 CGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQS 410
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +YSK I EA K F E +++SW I + ++ + +FK++ G+R
Sbjct: 411 ALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPK-VGLR 469
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKCGLISCSYK 359
PD TF ++LAAC+ V G L ++ ++ ++++ + G ++ +
Sbjct: 470 PDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAES 529
Query: 360 LFNEM-LHRNVVSWNTIIAA---HANHRLGGSALKLFEQMKATGIKPD-SVTFIGLLTAC 414
+ M R+ V W+T++ A H + G A + K + P+ +VT I L
Sbjct: 530 MIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAE-----KILQLDPNCAVTHITLANMY 584
Query: 415 NHAGLVKEGEAYFNSMEKTYGI 436
G KE A M K+ G+
Sbjct: 585 AAKGKWKEA-AEVRKMMKSKGV 605
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/578 (37%), Positives = 338/578 (58%), Gaps = 8/578 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L C+ + L+ G LH+ ++K + ++ V N ++++YAKCG + AR+ F+ +
Sbjct: 452 TYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFI 511
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
R+ VSW+A+I G+ Q + A F +M L P+E AS +S CA +Q+L +G+
Sbjct: 512 RNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGE 571
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H + +K G + + G+SLI MY+K G A V+ ++VS NA+IAG+ +N
Sbjct: 572 QVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQND 631
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL-ESNPFVG 239
E ++F+ M +GL P +FA L+ C+ L G +HCL K L F+G
Sbjct: 632 LVE-AIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLG 690
Query: 240 NTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
+++ +Y +A+ F + K I W I+ + E+ L +++EM ++
Sbjct: 691 VSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNA 750
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
RPD TFAS+L AC+ LAS+ G+ IH+ + + L+ D G+A+V+MYAKCG + S
Sbjct: 751 -RPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSV 809
Query: 359 KLFNEMLHRN-VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++F EM +N V+SWN++I A + +ALK+F++MK T I+PD VTF+G+LTAC+HA
Sbjct: 810 QVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHA 869
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
G V EG F+ M +Y I P ++H C+IDLLGR G L EAEE+ K + ++ T
Sbjct: 870 GRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEFIDKLNFEPNAMIWAT 929
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL ACR+ D + G R A++L L+P +SPYVLLSN+YA+ G W +V R+ +++ GL
Sbjct: 930 LLGACRIHGDDIRGRRAAEKLIELEPENSSPYVLLSNIYAASGNWDEVNSVRRAMREKGL 989
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+K P S I V F + H GEI+ +LK L
Sbjct: 990 RKLPGCSWIVVGQKTNLFVAGDKFHPSAGEIHALLKDL 1027
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 145/482 (30%), Positives = 259/482 (53%), Gaps = 10/482 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+L + +AL G+ +HA +K G+ +V V + ++N+YAKC KM A+KVFD +
Sbjct: 351 TLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDAL 410
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
ERNLV W+AM+ G+ Q G ++ FS+M P+E+ + S +SACA ++ L G+
Sbjct: 411 DERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGR 470
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H++ +K + FV N+L+ MY K G +A + + VS+NA+I G+V+ +
Sbjct: 471 QLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEE 530
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
++ F +F+ M+ G+ PD S A L C+ L +G +HC VK L++ + G+
Sbjct: 531 DEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGS 590
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +Y K I A F + + ++S N IA + D + + +F+EM N+ G+
Sbjct: 591 SLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQ-NDLVEAIDLFQEMQNE-GLN 648
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMR--LNQDVGVGNALVNMYAKCGLISCSY 358
P + TFAS+L AC G + G+QIH LI+ R L +G +L+ MY + +
Sbjct: 649 PSEITFASLLDACTGPYKLNLGRQIHC-LIQKRGLLYDGDFLGVSLLVMYMNSQRKTDAD 707
Query: 359 KLFNEMLH-RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
LF+E + ++ + W II+ H + AL+L+++M +PD TF +L AC+
Sbjct: 708 ILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSIL 767
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
+ +G +S+ G+ D + ++D+ + G + + + ++ D I +
Sbjct: 768 ASLGDGR-MIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNS 826
Query: 478 LL 479
++
Sbjct: 827 MI 828
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 133/399 (33%), Positives = 217/399 (54%), Gaps = 5/399 (1%)
Query: 19 QQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGH 78
++ + + + K+G+ PD + V+ G++ A +F +M N+V+W+ MISGH
Sbjct: 265 EEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGH 324
Query: 79 HQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS 135
+ G + A++FF M + S +SA A +++L G +HA ++K G S
Sbjct: 325 VKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNV 384
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
+VG+SLI+MY K A V+ E NLV +NA++ G+ +N K ++F M
Sbjct: 385 YVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGC 444
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
G PD F++ L C+ L G LH +K E N FV NT++ +Y+K + EA
Sbjct: 445 GFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEA 504
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
+ F I +D +SWN I D ++ ++F+ M D G+ PD+ + ASIL+ CA
Sbjct: 505 RQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILD-GIAPDEVSLASILSGCAN 563
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
L +++ G+Q+H L++ L + G++L++MY KCG I + +F+ M R+VVS N I
Sbjct: 564 LQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAI 623
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
IA +A + L A+ LF++M+ G+ P +TF LL AC
Sbjct: 624 IAGYAQNDL-VEAIDLFQEMQNEGLNPSEITFASLLDAC 661
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 232/459 (50%), Gaps = 41/459 (8%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L C++ + G +H V+KMG + + ++++Y+KCG ++ ARK+FD + + +
Sbjct: 188 VLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPD 247
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
VSW+AMI+G+ Q G AL+ F M L+P++ F + I+AC G+
Sbjct: 248 TVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGL----------- 296
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
G DA ++ + N+V++N +I+G V+ +
Sbjct: 297 ------------------------GRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIE 332
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
+ FK M + G+ R + L + L G+++H +K L SN +VG++++
Sbjct: 333 AIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLIN 392
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y+K + A+K F ++E++L+ WN + + K + +F EM G PD+F
Sbjct: 393 MYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRG-CGFWPDEF 451
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T+ SIL+ACA L ++ G+Q+H+ +I+ ++ V N LV+MYAKCG + + + F +
Sbjct: 452 TYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFI 511
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+R+ VSWN II + A +F +M GI PD V+ +L+ C + +++GE
Sbjct: 512 RNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGE 571
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYT 463
+ K+ G+ + + LID+ + G +EA Y
Sbjct: 572 QVHCFLVKS-GLQTCLYAGSSLIDMYVKCGA-IEAARYV 608
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/461 (27%), Positives = 226/461 (49%), Gaps = 64/461 (13%)
Query: 16 KALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMI 75
+A + ++HA LK G + + +++LYAKCG + A K F+++ +R++++W++++
Sbjct: 95 QASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVL 154
Query: 76 SGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYA 132
S + + G + F + + PN++ +A +S+CA + + G+Q+H +K G+
Sbjct: 155 SMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFE 214
Query: 133 SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM 192
SF SLI MY K G DA ++ +P+ VS+ A+IAG+V+ PE+ +VF+ M
Sbjct: 215 FNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDM 274
Query: 193 LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI 252
+ GL+PD+ +F + C VG +
Sbjct: 275 QKLGLVPDQVAFVTVITAC--------------------------VG---------LGRL 299
Query: 253 GEAEKAFRLIEEKDLISWNTFIAA-CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+A F + ++++WN I+ D E + FK M GV+ T S+L+
Sbjct: 300 DDACDLFVQMPNTNVVAWNVMISGHVKRGCDIE-AIDFFKNMWKT-GVKSTRSTLGSVLS 357
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
A A L ++ +G +HA I+ LN +V VG++L+NMYAKC + + K+F+ + RN+V
Sbjct: 358 AIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVL 417
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN-----------HAGLV 420
WN ++ +A + +KLF +M+ G PD T+ +L+AC H+ ++
Sbjct: 418 WNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFII 477
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
K Y +E T L+D+ + G L EA +
Sbjct: 478 KHNFEYNLFVENT------------LVDMYAKCGALEEARQ 506
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 142/267 (53%), Gaps = 9/267 (3%)
Query: 218 RKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC 277
R +H T+K S +G+ I+ LY+K + A KAF +E++D+++WN+ ++
Sbjct: 98 RTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMY 157
Query: 278 SHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD 337
S E+ + F + N GV P+ FT+A +L++CA L + GKQ+H +I+M +
Sbjct: 158 SRQGSLEQVIWCFGSLQN-CGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFN 216
Query: 338 VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA 397
+L++MY+KCG + + K+F+ ++ + VSW +IA + L ALK+FE M+
Sbjct: 217 SFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQK 276
Query: 398 TGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLL 457
G+ PD V F+ ++TAC G + + F M T ++ + +I + G +
Sbjct: 277 LGLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNT-----NVVAWNVMISGHVKRGCDI 331
Query: 458 EAEEYTK---KFPLGQDPIVLGTLLSA 481
EA ++ K K + LG++LSA
Sbjct: 332 EAIDFFKNMWKTGVKSTRSTLGSVLSA 358
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/573 (35%), Positives = 328/573 (57%), Gaps = 6/573 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +L C L +G +H V++ G + DV V N ++ +Y KCG + AR VFD M
Sbjct: 197 TFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRM 256
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
R+ +SW+AMISG+ + L L F M + P+ S ISAC + G+
Sbjct: 257 PRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGR 316
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H Y +K G+ + V NSLI M+ VG +A +V+ + +LVS+ A+I+G+ +N
Sbjct: 317 EVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNG 376
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
PEK E + +M +G++PD + A L C+ L KG++LH + L S V N
Sbjct: 377 LPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVAN 436
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +YSK I +A + F I K++ISW + I + L F++M ++
Sbjct: 437 SLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMI--LSLK 494
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P+ T S+L+ACA + ++ GK+IHAH +R L D + NAL++MY +CG + ++
Sbjct: 495 PNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQ 554
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN ++V SWN ++ +A GG A++LF +M + + PD +TF LL AC+ +G+V
Sbjct: 555 FNS-CEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMV 613
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+G YF SME + I+P+++H+ ++DLLGRAG+L +A E+ KK P+ DP + G LL+
Sbjct: 614 TDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLN 673
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ ++V +GE A+ +F + + Y+LL NLYA G W +VA RK+++++ L +
Sbjct: 674 ACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVD 733
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLK 573
P S +EV G F + H +I EIN +L+
Sbjct: 734 PGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLE 766
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 139/456 (30%), Positives = 240/456 (52%), Gaps = 6/456 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+LL C +A +G +H+ V K + V + N +L+++ + G ++ A VF +M+ER
Sbjct: 99 ALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAER 158
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
+L SW+ ++ G+ +AG AL + +M + P+ Y F + C G+ L +G+++H
Sbjct: 159 DLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVH 218
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ +++G+ S V N+LI+MY+K G A LV+ + +S+NA+I+G+ EN
Sbjct: 219 LHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCL 278
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+G +F +M + PD + + C D R G +H +K + V N+++
Sbjct: 279 EGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLI 338
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
++S EAE F +E KDL+SW I+ EK + + M ++ GV PD+
Sbjct: 339 QMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHE-GVVPDE 397
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T AS+L+ACAGL + G +H R L V V N+L++MY+KC I + ++F+
Sbjct: 398 ITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHR 457
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
+ ++NV+SW +II + AL F+QM +KP+SVT + +L+AC G + G
Sbjct: 458 IPNKNVISWTSIILGLRLNYRSFEALFFFQQM-ILSLKPNSVTLVSVLSACARIGALSCG 516
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+ +T G+ D L+D+ R G++ A
Sbjct: 517 KEIHAHALRT-GLGFDGFLPNALLDMYVRCGRMEPA 551
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 98/212 (46%), Gaps = 5/212 (2%)
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
N+ I D EK L M + V ++ T+ ++L C + G ++H+++
Sbjct: 63 NSLILELCLKGDLEKALIHLDSM-QELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVS 121
Query: 331 RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALK 390
+ V +GNAL++M+ + G + ++ +F +M R++ SWN ++ +A AL
Sbjct: 122 KTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALN 181
Query: 391 LFEQMKATGIKPDSVTFIGLLTACNH-AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
L+ +M GI+PD TF +L C L + E + + + YG D++ LI +
Sbjct: 182 LYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIR--YGFESDVDVVNALITM 239
Query: 450 LGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+ G + A + P +D I ++S
Sbjct: 240 YVKCGDIFSARLVFDRMP-RRDRISWNAMISG 270
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/643 (33%), Positives = 347/643 (53%), Gaps = 74/643 (11%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+ LL C ++++ + +HA +L ++ + N ++++Y KC + ARK+FD M +
Sbjct: 19 AKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQ 78
Query: 66 RNL-------------------------------VSWSAMISGHHQAGEHLLALEFFSQM 94
RN SW++M+SG Q +LE+F +M
Sbjct: 79 RNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKM 138
Query: 95 H---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
H L NEY F SA+SACAG+ L G Q+HA K Y++ ++G++LI MY K G
Sbjct: 139 HREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSV 198
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
+ A V+ E NLV++N+LI + +N + EVF M+ GL PD + A + C
Sbjct: 199 ACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSAC 258
Query: 212 SVSNDLRKGMILHCLTVKC-KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIE------- 263
+ L++G+ +H VK K + +GN ++ +Y+K + + EA + F +
Sbjct: 259 ASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSE 318
Query: 264 ------------------------EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+++++SWN IA + + E+ L +F+ + + +
Sbjct: 319 TSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRE-SI 377
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN------QDVGVGNALVNMYAKCGL 353
P +TF ++L+ACA LA + G+Q H H+++ D+ VGN+L++MY KCG
Sbjct: 378 WPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGS 437
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
I ++F +M R+ VSWN II +A + G AL++F +M G KPD VT IG+L A
Sbjct: 438 IEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCA 497
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C+HAGLV+EG YF SME+ +G+ P +H+TC++DLLGRAG L EA+ + P+ D +
Sbjct: 498 CSHAGLVEEGRHYFFSMEE-HGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAV 556
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
V G+LL+AC++ ++ +G+ A++L + P + PYVLLSN+YA G WGDV RK+++
Sbjct: 557 VWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMR 616
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
G+ K+P S IEV+ F V + SH +I +LK L+
Sbjct: 617 QQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLT 659
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 207/437 (47%), Gaps = 69/437 (15%)
Query: 97 LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMY----------- 145
LPN FA + +C +S + +HA L ++ F+ N LI +Y
Sbjct: 12 LPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARK 71
Query: 146 --------------------MKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKG 185
K G+ +A ++G EP+ S+N++++GF ++ + E+
Sbjct: 72 LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 186 FEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMAL 245
E F M R+ L + +SF L C+ DL G +H L K + ++ ++G+ ++ +
Sbjct: 132 LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDM 191
Query: 246 YSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFT 305
YSK + AE+ F + E++L++WN+ I + L VF M D G+ PD+ T
Sbjct: 192 YSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMM-DSGLEPDEVT 250
Query: 306 FASILAACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKCGLISCSYKLFN-- 362
AS+++ACA L +++ G QIHA +++ + D+ +GNALV+MYAKC ++ + ++F+
Sbjct: 251 LASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRM 310
Query: 363 -----------------------------EMLHRNVVSWNTIIAAHANHRLGGSALKLFE 393
+M RNVVSWN +IA + + AL+LF
Sbjct: 311 SIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFR 370
Query: 394 QMKATGIKPDSVTFIGLLTAC-NHAGLVKEGEAYFNSMEKTY----GISPDIEHFTCLID 448
+K I P TF LL+AC N A L+ +A+ + +++ + G DI LID
Sbjct: 371 LLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLID 430
Query: 449 LLGRAGKLLEAEEYTKK 465
+ + G + + +K
Sbjct: 431 MYMKCGSIEDGSRVFEK 447
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 210/436 (48%), Gaps = 47/436 (10%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S S L C+ L G +HA V K DV + + ++++Y+KCG + A +VF M
Sbjct: 149 SFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGM 208
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
ERNLV+W+++I+ + Q G ALE F +M L P+E AS +SACA + +L +G
Sbjct: 209 IERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGL 268
Query: 121 QIHAYSLKFGYASISFV-GNSLISMYMKV--------------------------GYS-- 151
QIHA +K V GN+L+ MY K GY+
Sbjct: 269 QIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARA 328
Query: 152 ---SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGL 208
A ++ + + N+VS+NALIAG+ +N + E+ +F+L+ R+ + P ++F L
Sbjct: 329 ASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLL 388
Query: 209 EICSVSNDLRKGMILHCLTVKCKL------ESNPFVGNTIMALYSKFNLIGEAEKAFRLI 262
C+ DL G H +K ES+ FVGN+++ +Y K I + + F +
Sbjct: 389 SACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKM 448
Query: 263 EEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG 322
+E+D +SWN I + + L +F++M G +PD T +L AC+ V+ G
Sbjct: 449 KERDCVSWNAIIVGYAQNGYGAEALQIFRKMLV-CGEKPDHVTMIGVLCACSHAGLVEEG 507
Query: 323 KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAA--- 378
+ + L +V++ + G ++ + L M ++ + V W +++AA
Sbjct: 508 RHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKV 567
Query: 379 HANHRLGG-SALKLFE 393
H N +G +A KL E
Sbjct: 568 HGNIEMGKHAAEKLLE 583
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 152/301 (50%), Gaps = 32/301 (10%)
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
++R LP+ FA L+ C S R ++H + + F+ N ++ +Y K +
Sbjct: 6 LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACS-------------------HCA----------- 281
+ +A K F + +++ +WN+ I+ + C+
Sbjct: 66 LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQH 125
Query: 282 -DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV 340
+E+ L F +M + + ++++F S L+ACAGL + G Q+HA + + R + DV +
Sbjct: 126 DRFEESLEYFVKMHREDFLL-NEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYM 184
Query: 341 GNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGI 400
G+AL++MY+KCG ++C+ ++F+ M+ RN+V+WN++I + + AL++F +M +G+
Sbjct: 185 GSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGL 244
Query: 401 KPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
+PD VT +++AC +KEG + KT D+ L+D+ + K+ EA
Sbjct: 245 EPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEAR 304
Query: 461 E 461
Sbjct: 305 R 305
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/573 (35%), Positives = 328/573 (57%), Gaps = 6/573 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +L C L +G +H V++ G + DV V N ++ +Y KCG + AR VFD M
Sbjct: 197 TFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRM 256
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
R+ +SW+AMISG+ + L L F M + P+ S ISAC + G+
Sbjct: 257 PRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGR 316
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H Y +K G+ + V NSLI M+ VG +A +V+ + +LVS+ A+I+G+ +N
Sbjct: 317 EVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNG 376
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
PEK E + +M +G++PD + A L C+ L KG++LH + L S V N
Sbjct: 377 LPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVAN 436
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +YSK I +A + F I K++ISW + I + L F++M ++
Sbjct: 437 SLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMI--LSLK 494
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P+ T S+L+ACA + ++ GK+IHAH +R L D + NAL++MY +CG + ++
Sbjct: 495 PNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQ 554
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN ++V SWN ++ +A GG A++LF +M + + PD +TF LL AC+ +G+V
Sbjct: 555 FNS-CEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMV 613
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+G YF SME + I+P+++H+ ++DLLGRAG+L +A E+ KK P+ DP + G LL+
Sbjct: 614 TDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLN 673
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ ++V +GE A+ +F + + Y+LL NLYA G W +VA RK+++++ L +
Sbjct: 674 ACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVD 733
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLK 573
P S +EV G F + H +I EIN +L+
Sbjct: 734 PGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLE 766
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/456 (30%), Positives = 240/456 (52%), Gaps = 6/456 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+LL C +A +G +H+ V K + V + N +L+++ + G ++ A VF +M+ER
Sbjct: 99 ALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAER 158
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
+L SW+ ++ G+ +AG AL + +M + P+ Y F + C G+ L +G+++H
Sbjct: 159 DLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVH 218
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ +++G+ S V N+LI+MY+K G A LV+ + +S+NA+I+G+ EN
Sbjct: 219 LHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCL 278
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+G +F +M + PD + + C D R G +H +K + V N+++
Sbjct: 279 EGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLI 338
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
++S EAE F +E KDL+SW I+ EK + + M ++ GV PD+
Sbjct: 339 QMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHE-GVVPDE 397
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T AS+L+ACAGL + G +H R L V V N+L++MY+KC I + ++F+
Sbjct: 398 ITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHR 457
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
+ ++NV+SW +II + AL F+QM +KP+SVT + +L+AC G + G
Sbjct: 458 IPNKNVISWTSIILGLRLNYRSFEALFFFQQM-ILSLKPNSVTLVSVLSACARIGALSCG 516
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+ +T G+ D L+D+ R G++ A
Sbjct: 517 KEIHAHALRT-GLGFDGFLPNALLDMYVRCGRMEPA 551
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 98/212 (46%), Gaps = 5/212 (2%)
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
N+ I D EK L M + V ++ T+ ++L C + G ++H+++
Sbjct: 63 NSLILELCLKGDLEKALIHLDSM-QELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVS 121
Query: 331 RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALK 390
+ V +GNAL++M+ + G + ++ +F +M R++ SWN ++ +A AL
Sbjct: 122 KTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALN 181
Query: 391 LFEQMKATGIKPDSVTFIGLLTACNH-AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
L+ +M GI+PD TF +L C L + E + + + YG D++ LI +
Sbjct: 182 LYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIR--YGFESDVDVVNALITM 239
Query: 450 LGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+ G + A + P +D I ++S
Sbjct: 240 YVKCGDIFSARLVFDRMP-RRDRISWNAMISG 270
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/575 (34%), Positives = 331/575 (57%), Gaps = 4/575 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++ C K LQ G +H V K G+ D V ++++Y KC ++ AR +FD+M
Sbjct: 32 TLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKM 91
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
ER+LV+W+ MI G+ + G+ +L F +M ++P++ + + ACA + ++ K +
Sbjct: 92 QERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKAR 151
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
I Y + + +G ++I MY K G A ++ E N++S++A+IA + +
Sbjct: 152 IIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHG 211
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
Q K ++F++ML G+LPD+ + A L CS +L+ G ++H + K L+ + FV
Sbjct: 212 QGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCA 271
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y K I +A F + E+DL++W I + C + + L +F +M + GV
Sbjct: 272 ALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKM-REEGVV 330
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD +++ ACA L ++ + I ++ R + DV +G A+++M+AKCG + + ++
Sbjct: 331 PDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREI 390
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+ M +NV+SW+ +IAA+ H G AL LF M +GI P+ +T + LL AC+HAGLV
Sbjct: 391 FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLV 450
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+EG +F+ M + Y + D++H+TC++DLLGRAG+L EA + + + +D + G L
Sbjct: 451 EEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLG 510
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR +DVV+ E+ A L LQP Y+LLSN+YA+ G W DVA R ++ LKK
Sbjct: 511 ACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKI 570
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P ++ IEV +F+V + +H + EI MLK+L
Sbjct: 571 PGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSL 605
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 199/391 (50%), Gaps = 5/391 (1%)
Query: 74 MISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFG 130
M+ G + G+++ F ++ P+ Y I AC +++L G+ IH KFG
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 131 YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFK 190
FV +L+ MY+K DA ++ + E +LV++ +I G+ E + + +F+
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 191 LMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN 250
M +G++PD+ + + C+ + K I+ + K + + +G ++ +Y+K
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180
Query: 251 LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
+ A + F +EEK++ISW+ IAA + K L +F+ M + G+ PD T AS+L
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSS-GMLPDKITLASLL 239
Query: 311 AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVV 370
AC+ L ++Q G+ IH + + L+ D V ALV+MY KC I + LF++M R++V
Sbjct: 240 YACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLV 299
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSM 430
+W +I +A +L LF++M+ G+ PD V + ++ AC G + + + +
Sbjct: 300 TWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYI 359
Query: 431 EKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
++ D+ T +ID+ + G + A E
Sbjct: 360 QRK-KFQLDVILGTAMIDMHAKCGCVESARE 389
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/558 (35%), Positives = 338/558 (60%), Gaps = 4/558 (0%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
SLHA + K+G + + V +++ YA CG + AR+ FD ++ +++VSW+ M++ + +
Sbjct: 62 SLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEND 121
Query: 83 EHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
+L+ F++M ++ PN + FA + AC G+++ G+ +H LK Y +VG
Sbjct: 122 RFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGV 181
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
L+ +Y K G ++D L V+ E + +++ ++ +I+ + ++ Q + E+F M R +LP
Sbjct: 182 GLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLP 241
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
++F+FA L+ C+ +L+ G +HC +K L+ N FV N +M +Y+K + + K F
Sbjct: 242 NQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLF 301
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+ ++ ++WNT I D +K LS++K M + V+ + T++S+L ACA LA++
Sbjct: 302 MELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNML-ECQVQASEVTYSSVLRACASLAAM 360
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
+ G QIH+ ++ ++DV VGNAL++MYAKCG I + +F+ + R+ +SWN +I+ +
Sbjct: 361 ELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGY 420
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
+ H L G ALK F+ M+ T P+ +TF+ +L+AC++AGL+ G+ YF SM + YGI P
Sbjct: 421 SMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPC 480
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLF 499
+EH+TC++ LLGR+G L +A + ++ PL + V LL AC + DV +G A+Q+
Sbjct: 481 MEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQIL 540
Query: 500 HLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAE 559
+ P + +VLLSN+YA W VA RK +K+ G+KKEP S IE QG F+V +
Sbjct: 541 QIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGD 600
Query: 560 FSHSKIGEINYMLKTLSL 577
SH + I+ ML+ L++
Sbjct: 601 TSHPDMKMISGMLEWLNM 618
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/405 (29%), Positives = 210/405 (51%), Gaps = 13/405 (3%)
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNE---YIFASAISACAGIQSLVKG 119
M +RN VS+ +I G+ Q+ + ++ FS++H +E ++F + + ++
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+HA K G+ S +FVG +LI Y G + A + ++VS+ ++A + EN
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ + ++F M G P+ F+FAG L+ C G +H +K E + +VG
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEE---KDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
++ LY+KF G+A R+ EE D+I W+ I+ + + + +F +M
Sbjct: 181 VGLLDLYTKF---GDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRA 237
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
V P+ FTFAS+L +CA + ++Q GKQ+H H++++ L+ +V V NAL+++YAKCG +
Sbjct: 238 F-VLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDN 296
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
S KLF E+ +RN V+WNT+I + G AL L++ M ++ VT+ +L AC
Sbjct: 297 SMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACAS 356
Query: 417 AGLVKEGEAYFN-SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
++ G + S++ Y D+ LID+ + G + A
Sbjct: 357 LAAMELGTQIHSLSLKTIY--DKDVVVGNALIDMYAKCGSIKNAR 399
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 197/389 (50%), Gaps = 16/389 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + +L C +A G S+H VLK + D+ V +L+LY K G +VF+EM
Sbjct: 144 TFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEM 203
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+ +++ WS MIS + Q+ + A+E F QM +LPN++ FAS + +CA I++L G+
Sbjct: 204 PKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGK 263
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H + LK G FV N+L+ +Y K G +++ ++ E N V++N +I G+V++
Sbjct: 264 QVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSG 323
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+K ++K ML + +++ L C+ + G +H L++K + + VGN
Sbjct: 324 DGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGN 383
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y+K I A F ++ E+D ISWN I+ S + L F+ M V
Sbjct: 384 ALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECV- 442
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG------NALVNMYAKCGLI 354
P+ TF SIL+AC+ + G+ ++ QD G+ +V + + G +
Sbjct: 443 PNKLTFVSILSACSNAGLLDIGQNYFKSMV-----QDYGIEPCMEHYTCMVWLLGRSGHL 497
Query: 355 SCSYKLFNEM-LHRNVVSWNTIIAAHANH 382
+ KL E+ L NV W ++ A H
Sbjct: 498 DKAVKLIEEIPLEPNVKVWRALLGACVIH 526
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 153/291 (52%), Gaps = 9/291 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L C+ + LQ G +H VLK+G+ +V VSN ++++YAKCG++ + K+F E+
Sbjct: 245 TFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMEL 304
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
RN V+W+ MI G+ Q+G+ AL + M + +E ++S + ACA + ++ G
Sbjct: 305 PNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGT 364
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH+ SLK Y VGN+LI MY K G +A LV+ E + +S+NA+I+G+ +
Sbjct: 365 QIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHG 424
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ + F++M +P++ +F L CS + L G V+ P + +
Sbjct: 425 LVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQ-DYGIEPCMEH 483
Query: 241 TIMALYSKFNLIGEAEKAFRLIE----EKDLISWNTFIAACSHCADYEKGL 287
++ G +KA +LIE E ++ W + AC D + G+
Sbjct: 484 YTCMVW-LLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGI 533
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/577 (34%), Positives = 338/577 (58%), Gaps = 8/577 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+L + +++G +H + K+G V N +++ Y K+ A+K+FDE+
Sbjct: 253 TFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDEL 312
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAIS---ACAGIQSLVKGQ 120
++R+++SW++MISG+ + G +E F +M + + A+ ++ ACA I +L+ G+
Sbjct: 313 TDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGK 372
Query: 121 QIHAYSLKFGY--ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+H+YS+K + F N+L+ MY K G + A+ V+ E +VS+ ++I G+V
Sbjct: 373 VLHSYSIKAATLDREVRF-NNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVR 431
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ ++F M +G++PD ++ L C+++ +L+ G I+H + LE+N FV
Sbjct: 432 EGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFV 491
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N + +Y+K + +A F +++KD+ISWNT I + + + L++F EM +
Sbjct: 492 SNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES- 550
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+PD T A IL ACA LA++ G++IH + +R ++D V NA+V+MY KCGL+ +
Sbjct: 551 -KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLAR 609
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
LF+ + ++++VSW +IA + H G A+ F QM+ TGI+PD V+FI +L AC+H+G
Sbjct: 610 SLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSG 669
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
L+ EG FN M+K I P++EH+ C++DLL R G L++A ++ K P+ D + G L
Sbjct: 670 LLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGAL 729
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L CR+ DV + E++A+++F L+P T YVLL+N+YA W +V RK + GLK
Sbjct: 730 LCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLK 789
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
K P S IE++G F + S + +I +LK L
Sbjct: 790 KNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRL 826
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/466 (30%), Positives = 241/466 (51%), Gaps = 9/466 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C++ K+++ G + + + G+ D I+ ++ +Y KCG + R VFD++SE
Sbjct: 155 SILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSES 214
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIH 123
+ W+ MIS + +G + ++ F QM L PN Y F+S + A + + +G+Q+H
Sbjct: 215 KIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVH 274
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
K G+ S + V NSLIS Y A ++ E + +++S+N++I+G+V+N +
Sbjct: 275 GLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDD 334
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK-CKLESNPFVGNTI 242
+G E+F ML G+ D + C+ L G +LH ++K L+ NT+
Sbjct: 335 RGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTL 394
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +YSK + A + F ++EK ++SW + I + + +F EM + GV PD
Sbjct: 395 LDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKS-RGVVPD 453
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+ SIL ACA +++ GK +H ++ L + V NAL +MYAKCG + ++ +F+
Sbjct: 454 VYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFS 513
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC-NHAGLVK 421
M ++V+SWNT+I + + L AL LF +M+ KPD T +L AC + A L K
Sbjct: 514 HMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAALDK 572
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
E + ++ Y S D ++D+ + G L+ A P
Sbjct: 573 GREIHGYALRNGY--SEDKYVTNAVVDMYVKCGLLVLARSLFDMIP 616
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 184/365 (50%), Gaps = 13/365 (3%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+ S + CA +S+ G+++ + G +G L+ MY+K G + +V+ +
Sbjct: 153 YCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLS 212
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
E + +N +I+ + + + +FK ML G+ P+ ++F+ L+ + + +G
Sbjct: 213 ESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQ 272
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
+H L K S V N++++ Y + A+K F + ++D+ISWN+ I+
Sbjct: 273 VHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGL 332
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR-MRLNQDVGVG 341
++G+ +F +M GV D T ++ ACA + ++ GK +H++ I+ L+++V
Sbjct: 333 DDRGIEIFIKMLV-FGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFN 391
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
N L++MY+KCG ++ + ++F M + VVSW ++I + L A+KLF++MK+ G+
Sbjct: 392 NTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVV 451
Query: 402 PDSVTFIGLLTACNHAGLVKEGEAYF-----NSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
PD +L AC G +K G+ N++E +S L D+ + G +
Sbjct: 452 PDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVS------NALTDMYAKCGSM 505
Query: 457 LEAEE 461
+A +
Sbjct: 506 KDAHD 510
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 132/260 (50%), Gaps = 1/260 (0%)
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
D ++ L++C+ +R G + + + + +G ++ +Y K + E F
Sbjct: 149 DLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVF 208
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+ E + WN I+ S +Y + +++FK+M + G++P+ +TF+SIL A +A V
Sbjct: 209 DKLSESKIFLWNLMISEYSGSGNYGESINLFKQML-ELGIKPNSYTFSSILKCFAAVARV 267
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
+ G+Q+H + ++ N V N+L++ Y + C+ KLF+E+ R+V+SWN++I+ +
Sbjct: 268 EEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGY 327
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
+ L +++F +M G+ D T + + AC + G + G+ + K + +
Sbjct: 328 VKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDRE 387
Query: 440 IEHFTCLIDLLGRAGKLLEA 459
+ L+D+ + G L A
Sbjct: 388 VRFNNTLLDMYSKCGDLNSA 407
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/566 (35%), Positives = 328/566 (57%), Gaps = 9/566 (1%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L+ G +H AV++ G V V+N +N+Y K G + AR++F +M E +L+SW+ +ISG
Sbjct: 313 LELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISG 372
Query: 78 HHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQ-SLVKGQQIHAYSLKFGYAS 133
++G +L F + LLP+++ S + AC+ ++ S G+Q+H +LK G
Sbjct: 373 CARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVL 432
Query: 134 ISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLML 193
SFV +LI +Y K G +A L++ +L S+NA++ GF + + +F LM
Sbjct: 433 DSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMH 492
Query: 194 RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
+G D+ +FA + L++G +H + +K + + FV + I+ +Y K +
Sbjct: 493 ERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMK 552
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
A K F I D ++W T I+ C + E+ L + +M GV+PD++TFA+++ AC
Sbjct: 553 SARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQM-RLAGVQPDEYTFATLVKAC 611
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
+ L +++ GKQIHA+++++ D V +LV+MYAKCG I +Y LF M R+V WN
Sbjct: 612 SLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWN 671
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT 433
+I A H AL F +MK+ G+ PD VTFIG+L+AC+H+GL + F+SM+KT
Sbjct: 672 AMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKT 731
Query: 434 YGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGER 493
YG+ P+IEH++CL+D L RAG + EAE+ P + TLL+ACR++ D GER
Sbjct: 732 YGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGER 791
Query: 494 LAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFE 553
+A++LF + P+ ++ YVLLSN+YA+ W + AR M+K +KKEP +S I+++
Sbjct: 792 VAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVH 851
Query: 554 KFTVAEFSHSKI----GEINYMLKTL 575
F + SH + ++ Y++K +
Sbjct: 852 LFVAGDRSHEETDLIYNKVEYVMKRI 877
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/480 (25%), Positives = 217/480 (45%), Gaps = 69/480 (14%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD--EMS 64
S+L H L G HA ++ G+ PD V+N+++ +YAKCG + ARK+FD S
Sbjct: 18 SILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQS 77
Query: 65 ERNLVSWSAMISGHHQAGE-----------HLLALEFFSQMHLLPNEYIFASAISACAGI 113
+R+LV+++A+++ + GE H+ L Q +L + + C
Sbjct: 78 DRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRL--LRQSVMLTTRHTLSPLFKLCLLY 135
Query: 114 QSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALI 173
S + + Y++K G FV +L+++Y K +A +++ ++V +N ++
Sbjct: 136 GSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMM 195
Query: 174 AGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE 233
+VE ++ +F R GL PD C++V+ L
Sbjct: 196 KAYVEMGAGDEVLGLFSAFHRSGLRPD------------------------CVSVRTILM 231
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
VG + + A K F ++ D+ WN +++ + + + F++M
Sbjct: 232 G---VGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDM 288
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
V D T+ IL+ A L ++ GKQIH ++R +Q V V N+ +NMY K G
Sbjct: 289 IKSR-VPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGS 347
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
++ + ++F +M +++SWNT+I+ A L +L+LF + +G+ PD T +L A
Sbjct: 348 VNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRA 407
Query: 414 CNHAGLVKEGEAYFNSMEKTY-------------GISPDIEHFTCLIDLLGRAGKLLEAE 460
C +S+E++Y GI D T LID+ + GK+ EAE
Sbjct: 408 C-------------SSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAE 454
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/481 (24%), Positives = 217/481 (45%), Gaps = 68/481 (14%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
+L +K+G+Q DV V+ ++N+YAK ++ AR +FD M R++V W+ M+ + + G
Sbjct: 143 ALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMG 202
Query: 83 EHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG-----------QQIHAYSLK 128
L FS H L P+ C +++++ G +Q+ AY+ K
Sbjct: 203 AGDEVLGLFSAFHRSGLRPD----------CVSVRTILMGVGKKTVFERELEQVRAYATK 252
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
FV + + ++ +N ++ +++ + + +
Sbjct: 253 L------FVCDD----------------------DSDVTVWNKTLSSYLQAGEGWEAVDC 284
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
F+ M++ + D ++ L + + N L G +H V+ + V N+ + +Y K
Sbjct: 285 FRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVK 344
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
+ A + F ++E DLISWNT I+ C+ E L +F ++ G+ PD FT S
Sbjct: 345 AGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRS-GLLPDQFTITS 403
Query: 309 ILAACAGL-ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR 367
+L AC+ L S G+Q+H ++ + D V AL+++Y+K G + + LF+
Sbjct: 404 VLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGF 463
Query: 368 NVVSWNTII---AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
++ SWN ++ N+R AL+LF M G K D +TF A +++G+
Sbjct: 464 DLASWNAMMHGFTVSDNYR---EALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGK 520
Query: 425 ---AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
A M Y D+ + ++D+ + G++ A + + P D + T++S
Sbjct: 521 QIHAVVIKMRFHY----DLFVISGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVISG 575
Query: 482 C 482
C
Sbjct: 576 C 576
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++L+ CS AL+QG +HA ++K+ D V ++++YAKCG + A +F M
Sbjct: 603 TFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRM 662
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
+ R++ W+AMI G Q G AL FF++M + P+ F +SAC+
Sbjct: 663 NTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACS 713
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/643 (34%), Positives = 342/643 (53%), Gaps = 73/643 (11%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+ LL C ++K+ +HA ++K ++ + N +++ Y KCG ARKVFD M +
Sbjct: 23 AKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQ 82
Query: 66 RNL-------------------------------VSWSAMISGHHQAGEHLLALEFFSQM 94
RN SW+AM+SG Q AL FF M
Sbjct: 83 RNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDM 142
Query: 95 H---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
H + NEY F SA+SACAG+ L G QIHA K Y ++G++L+ MY K G
Sbjct: 143 HSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVV 202
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
+ A + N+VS+N+LI + +N K EVF +M+ G+ PD + A + C
Sbjct: 203 ACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSAC 262
Query: 212 SVSNDLRKGMILHCLTVKCKLESNPFV-GNTIMALYSKFNLIGEAE-------------- 256
+ + +R+G+ +H VK N V GN ++ +Y+K + EA
Sbjct: 263 ASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSE 322
Query: 257 -------------KAFRLI----EEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
KA RL+ EK+++SWN IA + + E+ + +F + + +
Sbjct: 323 TSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRE-SI 381
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRL------NQDVGVGNALVNMYAKCGL 353
P +TF ++L ACA LA ++ G+Q H +++ D+ VGN+L++MY KCG+
Sbjct: 382 WPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGM 441
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ +F M+ R+VVSWN +I +A + G +AL++F +M +G KPD VT IG+L+A
Sbjct: 442 VEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSA 501
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C+HAGLV+EG YF+SM G++P +HFTC++DLLGRAG L EA + + P+ D +
Sbjct: 502 CSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNV 561
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
V G+LL+AC++ ++ +G+ +A++L + P + PYVLLSN+YA G W DV RK ++
Sbjct: 562 VWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMR 621
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
G+ K+P S IE+Q F V + H +I+ +LK L+
Sbjct: 622 QRGVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFLT 664
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 198/420 (47%), Gaps = 69/420 (16%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY---- 158
FA + +C +S + ++IHA +K ++S F+ N L+ Y K GY DA V+
Sbjct: 22 FAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMP 81
Query: 159 --------------------GEAF-------EPNLVSFNALIAGFVENQQPEKGFEVFKL 191
EAF EP+ S+NA+++GF ++ + E+ F
Sbjct: 82 QRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVD 141
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
M + + + +SF L C+ DL G+ +H L K + + ++G+ ++ +YSK +
Sbjct: 142 MHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGV 201
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ A++AF + ++++SWN+ I K L VF M D+GV PD+ T AS+++
Sbjct: 202 VACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFV-MMMDNGVEPDEITLASVVS 260
Query: 312 ACAGLASVQHGKQIHAHLI-RMRLNQDVGVGNALVNMYAKCGLIS--------------- 355
ACA ++++ G QIHA ++ R + D+ +GNALV+MYAKC ++
Sbjct: 261 ACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVV 320
Query: 356 ------CSYK----------LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG 399
C Y +F+ M+ +NVVSWN +IA + + A++LF +K
Sbjct: 321 SETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRES 380
Query: 400 IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK-----TYGISPDIEHFTCLIDLLGRAG 454
I P TF LL AC + +K G + K G DI LID+ + G
Sbjct: 381 IWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCG 440
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 207/428 (48%), Gaps = 47/428 (10%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S S L C+ L GI +HA + K DV + + ++++Y+KCG + A++ FD M
Sbjct: 153 SFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGM 212
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+ RN+VSW+++I+ + Q G ALE F M + P+E AS +SACA ++ +G
Sbjct: 213 AVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGL 272
Query: 121 QIHAYSLKFG-YASISFVGNSLISMYMKVGYSSDALLVYGE------------------- 160
QIHA +K Y + +GN+L+ MY K ++A LV+
Sbjct: 273 QIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARA 332
Query: 161 ------------AFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGL 208
E N+VS+NALIAG+ +N + E+ +F L+ R+ + P ++F L
Sbjct: 333 ASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLL 392
Query: 209 EICSVSNDLRKGMILHCLTVKCKL------ESNPFVGNTIMALYSKFNLIGEAEKAFRLI 262
C+ DL+ G H +K ES+ FVGN+++ +Y K ++ + F +
Sbjct: 393 NACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERM 452
Query: 263 EEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG 322
E+D++SWN I + L +F++M G +PD T +L+AC+ V+ G
Sbjct: 453 VERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVS-GQKPDHVTMIGVLSACSHAGLVEEG 511
Query: 323 KQ-IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAA-- 378
++ H+ + L +V++ + G + + L M + + V W +++AA
Sbjct: 512 RRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACK 571
Query: 379 -HANHRLG 385
H N LG
Sbjct: 572 VHGNIELG 579
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 141/299 (47%), Gaps = 30/299 (10%)
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
D FA L+ C S +H +K + S F+ N ++ Y K +A K F
Sbjct: 18 DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVF 77
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN-------------------DHGVR 300
+ +++ S+N ++ + ++ +VFK M + +R
Sbjct: 78 DRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALR 137
Query: 301 -----------PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
++++F S L+ACAGL + G QIHA + + R DV +G+ALV+MY+
Sbjct: 138 FFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYS 197
Query: 350 KCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
KCG+++C+ + F+ M RN+VSWN++I + + G AL++F M G++PD +T
Sbjct: 198 KCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLAS 257
Query: 410 LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
+++AC ++EG + K D+ L+D+ + ++ EA + PL
Sbjct: 258 VVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL 316
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/576 (36%), Positives = 329/576 (57%), Gaps = 5/576 (0%)
Query: 5 ISSLLHH-CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
I SL H C + G LH +K G+ V V + +L++Y K GK+ R+VF EM
Sbjct: 118 ILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEM 177
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
RN+VSW+A+I+G +AG + AL +FS+M + + Y FA A+ ACA +L G+
Sbjct: 178 PMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGR 237
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+IHA ++K G+ SFV N+L +MY K G L ++ + ++VS+ +I V+
Sbjct: 238 EIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMG 297
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
Q E + F M + P+ ++FA + C+ + G LH L + L ++ V N
Sbjct: 298 QEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVEN 357
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+IM +Y+K + + F + +D++SW+T IA S + + M + G +
Sbjct: 358 SIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRME-GPK 416
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P +F AS+L+AC +A ++HGKQ+HA+++ + L V +AL+NMY KCG I + ++
Sbjct: 417 PTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRI 476
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+ + ++VSW +I +A H + LFE++ G++PDSVTFIG+L+AC+HAGLV
Sbjct: 477 FDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLV 536
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
G YFN+M K Y ISP EH+ C+IDLL RAG+L +AE + P +D +V TLL
Sbjct: 537 DLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLR 596
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ DV G R A+++ L+P ++ L+N+YAS G W + A RK++K G+ KE
Sbjct: 597 ACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKE 656
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
P +S I+V+ F + SH + +I ML L+
Sbjct: 657 PGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLA 692
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 228/437 (52%), Gaps = 20/437 (4%)
Query: 34 QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQ 93
Q D+ SN L K G + AR++FD+MS+++ +SW+ +ISG+ A + AL F
Sbjct: 46 QTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKN 105
Query: 94 MH----LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
M L + +I + A AC + G+ +H Y++K G + FVG++L+ MY K G
Sbjct: 106 MRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNG 165
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
+ V+ E N+VS+ A+I G V ++ F M R + D ++FA L+
Sbjct: 166 KIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALK 225
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE---KD 266
C+ S L G +H +K + + FV NT+ +Y+K G+ E L E+ +D
Sbjct: 226 ACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNK---CGKLEYGLTLFEKMSMRD 282
Query: 267 LISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
++SW T I E + F M + V P+++TFA++++ CA LA ++ G+Q+H
Sbjct: 283 VVSWTTIITTLVQMGQEECAVQAFIRM-RESDVSPNEYTFAAVISGCANLARIEWGEQLH 341
Query: 327 AHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGG 386
A ++ + L + V N+++ MYAKCG ++ S +F+EM R++VSW+TIIA ++
Sbjct: 342 ALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVS 401
Query: 387 SALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEH---- 442
A +L M+ G KP +L+AC + +++ G+ Y +S +EH
Sbjct: 402 EAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQL-----HAYVLSIGLEHTAMV 456
Query: 443 FTCLIDLLGRAGKLLEA 459
+ LI++ + G + EA
Sbjct: 457 LSALINMYCKCGSIEEA 473
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 153/288 (53%), Gaps = 5/288 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++++ C+ ++ G LHA +L +G+ + V N ++ +YAKCG++ + +F EM
Sbjct: 320 TFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEM 379
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+ R++VSWS +I+G+ Q G A E S M + P E+ AS +SAC + L G+
Sbjct: 380 TRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGK 439
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HAY L G + V ++LI+MY K G +A ++ A ++VS+ A+I G+ E+
Sbjct: 440 QLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHG 499
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVG 239
+ ++F+ + R GL PD +F G L CS + + G + ++ K ++ +
Sbjct: 500 YSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHY 559
Query: 240 NTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKG 286
++ L + + +AE + +D + W+T + AC D E+G
Sbjct: 560 GCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERG 607
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 2/133 (1%)
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
D+ N + K G + + ++F++M ++ +SW T+I+ + N AL LF+ M+
Sbjct: 48 DLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMR 107
Query: 397 A-TGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGK 455
+G++ D AC V GE KT G+ + + L+D+ + GK
Sbjct: 108 VESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKT-GLVNSVFVGSALLDMYTKNGK 166
Query: 456 LLEAEEYTKKFPL 468
+ E + P+
Sbjct: 167 IFEGRRVFHEMPM 179
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/570 (36%), Positives = 325/570 (57%), Gaps = 8/570 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD-- 61
++ S+L CS +Q G +H V+K G + +V V ++++YAKC + A +F
Sbjct: 164 TLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGL 223
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
E +N V W+AM++G+ Q G+ A+EFF MH + N+Y F + ++AC+ + +
Sbjct: 224 EFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCF 283
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+Q+H + +K G+ S +V ++L+ MY K G +A + + ++VS+N+L+ GFV
Sbjct: 284 GEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVR 343
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ E+ +FK M + + D ++F L C V + K +H L +K E+ V
Sbjct: 344 HGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKS--VHGLIIKTGFENYKLV 401
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N ++ +Y+K + A F + EKD+ISW + + + +E+ L +F +M G
Sbjct: 402 SNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVT-G 460
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
V PD F ASIL+ACA L ++ GKQ+H I+ L V N+LV MYAKCG + +
Sbjct: 461 VNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDAD 520
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+F M ++V++W II +A + G ++LK ++ M ++G +PD +TFIGLL AC+HAG
Sbjct: 521 AIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAG 580
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV EG YF M K YGI P EH+ C+IDL GR+GKL EA++ + + D V +L
Sbjct: 581 LVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSL 640
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
LSACR+ ++ + ER A LF L+P PYV+LSN+Y++ W DVA RK++K G+
Sbjct: 641 LSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIV 700
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
KEP S +E+ F + H + EI
Sbjct: 701 KEPGCSWLEINSRVNTFISDDRGHPREAEI 730
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 223/459 (48%), Gaps = 44/459 (9%)
Query: 40 SNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMIS----------------------- 76
+N +LN +K G++ ARK+FD+M +++ SW+ MIS
Sbjct: 68 TNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSS 127
Query: 77 --------GHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAY 125
G+ + G + A + F M L +++ S + C+ + + G+ IH +
Sbjct: 128 ITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGF 187
Query: 126 SLKFGYASISFVGNSLISMYMKVGYSSDA-LLVYGEAFE-PNLVSFNALIAGFVENQQPE 183
+K G+ FV L+ MY K S+A L G F+ N V + A++ G+ +N
Sbjct: 188 VVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGY 247
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
K E F+ M QG+ ++++F L CS G +H VK SN +V + ++
Sbjct: 248 KAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALV 307
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG--VRP 301
+Y+K + A+ +E+ D++SWN+ + E+ L +FK M HG ++
Sbjct: 308 DMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNM---HGRNMKI 364
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
DD+TF S+L C + S+ + K +H +I+ V NALV+MYAK G + C+Y +F
Sbjct: 365 DDYTFPSVLNCCV-VGSI-NPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVF 422
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ML ++V+SW +++ +A + +LK+F M+ TG+ PD +L+AC L++
Sbjct: 423 EKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLE 482
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
G+ K+ G+ + L+ + + G L +A+
Sbjct: 483 FGKQVHLDFIKS-GLRWSQSVYNSLVAMYAKCGCLDDAD 520
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 32/169 (18%)
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN-HRL--------GGS----- 387
N L+N +K G ++ + KLF++M ++ SWNT+I+++ N RL G S
Sbjct: 69 NQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSI 128
Query: 388 -----------------ALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSM 430
A LF M+ G K T +L C+ GL++ GE +
Sbjct: 129 TWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFV 188
Query: 431 EKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
K G ++ T L+D+ + + EAE K + VL T +
Sbjct: 189 VKN-GFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAM 236
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/555 (36%), Positives = 318/555 (57%), Gaps = 4/555 (0%)
Query: 25 HAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ---A 81
HA +KM DV V + ++N+Y K G ARKVFD M ERN VSW+ MISG+ A
Sbjct: 131 HAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLA 190
Query: 82 GEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSL 141
E L + NE++F S +SA + + G+QIH ++K G SI VGN+L
Sbjct: 191 AEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNAL 250
Query: 142 ISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDR 201
++MY K G DAL + + + N ++++A+I G+ ++ +K ++F M G+ P
Sbjct: 251 VTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSE 310
Query: 202 FSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRL 261
F+F G + CS +G +H +K ES +V ++ +Y+K + I +A K F
Sbjct: 311 FTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDY 370
Query: 262 IEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQH 321
++E D++ W + I + E LS++ M + G+ P++ T AS+L AC+ LA+++
Sbjct: 371 LQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEME-GILPNELTMASVLKACSSLAALEQ 429
Query: 322 GKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN 381
GKQIHA ++ +V +G+AL MYAKCG + +F M R+V+SWN +I+ +
Sbjct: 430 GKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQ 489
Query: 382 HRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIE 441
+ G AL+LFE+M+ G KPD VTF+ +L+AC+H GLV+ G YF M +G+ P +E
Sbjct: 490 NGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVE 549
Query: 442 HFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHL 501
H+ C++D+L RAGKL EA E+T+ + + +L ACR R+ +G ++L L
Sbjct: 550 HYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMEL 609
Query: 502 QPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFS 561
+S YVLLS++Y++ G W DV R+M+K G+ KEP S IE++ F V +
Sbjct: 610 GSQESSAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQM 669
Query: 562 HSKIGEINYMLKTLS 576
H +IG+I+ L+ LS
Sbjct: 670 HPQIGDIHVELRQLS 684
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 138/485 (28%), Positives = 254/485 (52%), Gaps = 13/485 (2%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+S + L + ++LQ+G +LHA ++K V ++N ++NLYAKC ++ A+ VF+
Sbjct: 7 RSFFTALLQYTHNRSLQKGKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKFVFER 65
Query: 63 MSERNLVSWSAMISGHHQAG----EHLLALEFFSQM---HLLPNEYIFASAISACAGIQS 115
+ +++VSW+ +I+G+ Q G H++ E F +M + PN + FA +A + +
Sbjct: 66 IQNKDVVSWNCIINGYSQHGPSGSSHVM--ELFQRMRAENTAPNAHTFAGVFTAASTLVD 123
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
G+ HA ++K FVG+SL++MY K G + +A V+ E N VS+ +I+G
Sbjct: 124 AAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISG 183
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+ + + +F+LM R+ + F F L ++ + G +HC+ VK L S
Sbjct: 184 YASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSI 243
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
VGN ++ +Y+K + +A + F +K+ I+W+ I + D +K L +F M +
Sbjct: 244 VSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSM-H 302
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
G+RP +FTF ++ AC+ L + GKQ+H +L+++ + V ALV+MYAKC I
Sbjct: 303 LSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIV 362
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ K F+ + ++V W ++I + + AL L+ +M+ GI P+ +T +L AC+
Sbjct: 363 DARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACS 422
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
+++G+ K YG ++ + L + + G L + ++ P +D I
Sbjct: 423 SLAALEQGKQIHARTVK-YGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMP-ARDVISW 480
Query: 476 GTLLS 480
++S
Sbjct: 481 NAMIS 485
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 195/386 (50%), Gaps = 13/386 (3%)
Query: 97 LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALL 156
LP+ F +A+ +SL KG+ +HA +K +S ++ NSL+++Y K +A
Sbjct: 3 LPSNRSFFTALLQYTHNRSLQKGKALHAQIIK-SSSSCVYIANSLVNLYAKCQRLREAKF 61
Query: 157 VYGEAFEPNLVSFNALIAGFVENQQPEKG----FEVFKLMLRQGLLPDRFSFAGGLEICS 212
V+ ++VS+N +I G+ +Q G E+F+ M + P+ +FAG S
Sbjct: 62 VFERIQNKDVVSWNCIINGY--SQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAAS 119
Query: 213 VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNT 272
D G + H + +K + FVG+++M +Y K L EA K F + E++ +SW T
Sbjct: 120 TLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWAT 179
Query: 273 FIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
I+ + + L +F+ M + ++F F S+L+A V +GKQIH ++
Sbjct: 180 MISGYASQKLAAEALGLFRLMRREEE-GENEFVFTSVLSALTLPELVNNGKQIHCIAVKN 238
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
L V VGNALV MYAKCG + + + F +N ++W+ +I +A ALKLF
Sbjct: 239 GLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLF 298
Query: 393 EQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
M +GI+P TF+G++ AC+ G EG+ + + K G I T L+D+ +
Sbjct: 299 SSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLK-LGFESQIYVMTALVDMYAK 357
Query: 453 AGKLLEAEEYTKKFPLGQDP-IVLGT 477
+++A K F Q+P IVL T
Sbjct: 358 CSSIVDAR---KGFDYLQEPDIVLWT 380
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 3/119 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++S+L CS AL+QG +HA +K G +V + + + +YAKCG + VF M
Sbjct: 413 TMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRM 472
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKG 119
R+++SW+AMISG Q G ALE F +M L P+ F + +SAC+ + + +G
Sbjct: 473 PARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERG 531
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/571 (33%), Positives = 327/571 (57%), Gaps = 4/571 (0%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C L++G +H ++ +V V+N+YAKC ++ A K+FD M ER+
Sbjct: 153 LLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERD 212
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
LVSW+ +I+G Q G ALE +M P+ + + A A + L+ G+ IH
Sbjct: 213 LVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHG 272
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
Y+++ G+A + + +L MY K G A L++ + +VS+N+++ G+V+N +PEK
Sbjct: 273 YAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEK 332
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
VF+ ML +G+ P + L C+ DL +G +H + L S+ V N++++
Sbjct: 333 AIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLIS 392
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+YSK + A F + + +SWN I + + L+ F EM + G++PD F
Sbjct: 393 MYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKS-LGMKPDSF 451
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T S++ A A L+ +H K IH +IR L++++ V ALV+MY+KCG I + KLF+ +
Sbjct: 452 TMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMI 511
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
R+V++WN +I + H LG +AL LF++MK ++P+ +T++ +++AC+H+GLV EG
Sbjct: 512 SDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGL 571
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRL 484
+F SM++ YG+ P ++H+ ++DLLGRAG++ EA ++ + P+ V G +L AC++
Sbjct: 572 RHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKI 631
Query: 485 RRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYS 544
+++ +GE+ AK+LF L P +VLL+N+YAS W VA RK ++ GLKK P S
Sbjct: 632 HKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCS 691
Query: 545 MIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
++E++ F +H + I L+ L
Sbjct: 692 VVELRNEVHSFYSGSTTHPQSKRIYAFLEEL 722
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 218/452 (48%), Gaps = 8/452 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C+ K L Q I L V+K G+ + + +++L++K G + A +VF+ + ++
Sbjct: 55 LLELCTSMKELHQIIPL---VIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKL 111
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
+ M+ G+ + AL F +M + P Y F + C L +G++IH
Sbjct: 112 DALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHG 171
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ +A+ F +++MY K DA ++ E +LVS+N +IAGF +N +K
Sbjct: 172 QLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKK 231
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
E+ M +G PD + L + L G +H ++ + +
Sbjct: 232 ALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALAD 291
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+YSK + A F +++K ++SWN+ + + EK ++VF++M + G+ P
Sbjct: 292 MYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKML-EEGIDPTGV 350
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T L ACA L ++ GK +H + ++ L D+ V N+L++MY+KC + + +FN +
Sbjct: 351 TIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNL 410
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
R VSWN +I +A + AL F +MK+ G+KPDS T + ++ A + + +
Sbjct: 411 NGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAK 470
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+ + + + +I T L+D+ + G +
Sbjct: 471 -WIHGLIIRSCLDKNIFVTTALVDMYSKCGAI 501
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 112/221 (50%), Gaps = 3/221 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I LH C+ L++G +H V ++ + D+ V N ++++Y+KC ++ +A +F+ +
Sbjct: 351 TIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNL 410
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
+ R VSW+AMI G+ Q G AL FS+M L P+ + S I A A + +
Sbjct: 411 NGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAK 470
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IH ++ FV +L+ MY K G A ++ + +++++NA+I G+ +
Sbjct: 471 WIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHG 530
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
++F M + + P+ ++ + CS S + +G+
Sbjct: 531 LGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGL 571
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/643 (33%), Positives = 343/643 (53%), Gaps = 73/643 (11%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+ LL C K ++ + S+H +++ +V + N ++++Y KCG + ARKVFD MSE
Sbjct: 28 AKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSE 87
Query: 66 RNL-------------------------------VSWSAMISGHHQAGEHLLALEFFSQM 94
RN+ SW++MI+G Q AL++F +M
Sbjct: 88 RNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRM 147
Query: 95 H---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
H + N+Y F S +SAC+ ++ L G QIH K Y+ F+G+ LI Y K G
Sbjct: 148 HRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLV 207
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
A V+ E N+VS+N LI + +N + E F M G PD + A + C
Sbjct: 208 GCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSAC 267
Query: 212 SVSNDLRKGMILHCLTVKC-KLESNPFVGNTIMALYSKFNLIGEAE-------------- 256
+ ++G+ +H VK K ++ +GN ++ +Y+K + EA
Sbjct: 268 ATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSE 327
Query: 257 -----------------KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
F I++KD++SWN IA + + E+ L +F+ M V
Sbjct: 328 TTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFR-MLKRESV 386
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIR--MRLNQ----DVGVGNALVNMYAKCGL 353
P +TF ++L A A LA ++ G+Q H+H+++ R D+ VGN+L++MY KCG
Sbjct: 387 CPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGS 446
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ ++F M+ ++ VSWNT+I +A + G AL+LF++M +G KPD VT IG L A
Sbjct: 447 VEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCA 506
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C+HAGLV+EG YF SM K +G+ P +H+TC++DLLGRAG L EA++ + P D +
Sbjct: 507 CSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAV 566
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
V +LLSAC++ R++ +G+ +A+++F + PT++ PYVLL+N+Y+ G WGD RK+++
Sbjct: 567 VWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMR 626
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
G+ K+P S I++Q F V + H + EI +LK L+
Sbjct: 627 RRGVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLT 669
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 203/446 (45%), Gaps = 73/446 (16%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
FA + C ++S + +H ++ + F+ N LI +Y K GY A V+
Sbjct: 27 FAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMS 86
Query: 163 EPNLVSF-------------------------------NALIAGFVENQQPEKGFEVFKL 191
E N+ SF N++IAGF ++ + E+ + F
Sbjct: 87 ERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVR 146
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
M R + + +SF GL CS DL+ G +H L K K + F+G+ ++ YSK L
Sbjct: 147 MHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGL 206
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+G A + F +EEK+++SWN I + L F M+ + G +PD+ T AS+++
Sbjct: 207 VGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMT-ELGFKPDEVTLASVVS 265
Query: 312 ACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN-- 368
ACA LA+ + G QIHA +++ + D+ +GNALV+MYAKCG ++ + +F+ M RN
Sbjct: 266 ACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAV 325
Query: 369 -----------------------------VVSWNTIIAAHANHRLGGSALKLFEQMKATG 399
+VSWN +IA + + AL LF +K
Sbjct: 326 SETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRES 385
Query: 400 IKPDSVTFIGLLTA-CNHAGLVKEGEAYFNSMEKTY----GISPDIEHFTCLIDLLGRAG 454
+ P TF LL A N A L +A+ + ++ + G PDI LID+ + G
Sbjct: 386 VCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCG 445
Query: 455 KLLEA----EEYTKKFPLGQDPIVLG 476
+ E E +K + + +++G
Sbjct: 446 SVEEGLRVFENMVEKDHVSWNTMIIG 471
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 212/437 (48%), Gaps = 48/437 (10%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S S L CS+ K L+ G +H + K DV + + +++ Y+KCG + AR+VFD M
Sbjct: 158 SFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGM 217
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
E+N+VSW+ +I+ + Q G + ALE F +M L P+E AS +SACA + + +G
Sbjct: 218 EEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGV 277
Query: 121 QIHAYSLKFG-YASISFVGNSLISMYMKVGYSSDALLVYGEA------------------ 161
QIHA +K + + +GN+L+ MY K G ++A V+
Sbjct: 278 QIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKS 337
Query: 162 -------------FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGL 208
+ ++VS+NALIAG+ +N + E+ +F+++ R+ + P ++F L
Sbjct: 338 ASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLL 397
Query: 209 EICSVSNDLRKGMILHCLTVKCKL------ESNPFVGNTIMALYSKFNLIGEAEKAFRLI 262
+ DL G H VK E + FVGN+++ +Y K + E + F +
Sbjct: 398 NASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENM 457
Query: 263 EEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG 322
EKD +SWNT I + + L +F++M + G +PD T L AC+ V+ G
Sbjct: 458 VEKDHVSWNTMIIGYAQNGYGMEALELFQKML-ESGEKPDHVTMIGTLCACSHAGLVEEG 516
Query: 323 KQIHAHLIRMRLNQDVGVG-NALVNMYAKCGLISCSYKLFNEMLHR-NVVSWNTIIAA-- 378
++ + + V +V++ + G + + L M + + V W+++++A
Sbjct: 517 RRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACK 576
Query: 379 -HANHRLGG-SALKLFE 393
H N LG A K+FE
Sbjct: 577 VHRNITLGKYVAEKIFE 593
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 93/250 (37%), Gaps = 74/250 (29%)
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D FA +L C L S + + +H LI+ ++V + N L+++Y KCG + + K+F
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 362 NEMLHRNV-------------------------------VSWNTIIAAHANHRLGGSALK 390
+ M RNV SWN++IA A H AL
Sbjct: 83 DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142
Query: 391 LFEQMKATGIKPDSVTFIGLLTACNH---------------------------------- 416
F +M + +F L+AC+
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYS 202
Query: 417 -AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA-EEYTKKFPLG--QDP 472
GLV F+ ME+ +S + CLI + G +EA E + + LG D
Sbjct: 203 KCGLVGCARRVFDGMEEKNVVS-----WNCLITCYEQNGPAIEALEAFGRMTELGFKPDE 257
Query: 473 IVLGTLLSAC 482
+ L +++SAC
Sbjct: 258 VTLASVVSAC 267
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/573 (36%), Positives = 327/573 (57%), Gaps = 4/573 (0%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S +++ C+ ++ + G +HA V++MG + DV +N ++++Y K G++ +A +F++M +
Sbjct: 113 SCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPD 172
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
++VSW+A+ISG G A+E QM L+PN ++ +S + ACAG + G+QI
Sbjct: 173 SDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQI 232
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H + +K S ++G L+ MY K + DA+ V+ +L+ +NALI+G +
Sbjct: 233 HGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRH 292
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
++ F +F + ++GL +R + A L+ + +H L K + V N +
Sbjct: 293 DEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGL 352
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ Y K + + +A + F D+I+ + I A S C E + +F EM G+ PD
Sbjct: 353 IDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLR-KGLEPD 411
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
F +S+L ACA L++ + GKQ+HAHLI+ + D GNALV YAKCG I + F+
Sbjct: 412 PFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFS 471
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+ R VVSW+ +I A H G AL+LF +M GI P+ +T +L ACNHAGLV E
Sbjct: 472 SLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDE 531
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
+ YFNSM++ +GI EH++C+IDLLGRAGKL +A E P + V G LL A
Sbjct: 532 AKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGAS 591
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
R+ +D +G+ A++LF L+P + +VLL+N YAS GMW +VA RK++KDS +KKEP+
Sbjct: 592 RVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPA 651
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S +EV+ F V + SH EI L L
Sbjct: 652 MSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDEL 684
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 223/410 (54%), Gaps = 5/410 (1%)
Query: 19 QQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM-SERNLVSWSAMISG 77
Q G +HA + G DV V+N ++ +Y G M AR+VFDE SERN VSW+ ++S
Sbjct: 24 QLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSA 83
Query: 78 HHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
+ + + A++ F +M + P E+ F+ ++AC G +++ G+Q+HA ++ GY
Sbjct: 84 YVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKD 143
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
F N+L+ MY+K+G A +++ + + ++VS+NALI+G V N + E+ M
Sbjct: 144 VFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKS 203
Query: 195 QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGE 254
GL+P+ F + L+ C+ + G +H +K +S+ ++G ++ +Y+K + + +
Sbjct: 204 SGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDD 263
Query: 255 AEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA 314
A K F + +DLI WN I+ CSH +++ S+F + + G+ + T A++L + A
Sbjct: 264 AMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKE-GLGVNRTTLAAVLKSTA 322
Query: 315 GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNT 374
L + +Q+HA ++ D V N L++ Y KC +S + ++F E ++++ +
Sbjct: 323 SLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTS 382
Query: 375 IIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+I A + G A+KLF +M G++PD LL AC ++G+
Sbjct: 383 MITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGK 432
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 191/397 (48%), Gaps = 10/397 (2%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+SS+L C+ A G +H ++K D + ++++YAK + A KVFD MS
Sbjct: 213 LSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMS 272
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQ 121
R+L+ W+A+ISG G H A F + L N A+ + + A +++ +Q
Sbjct: 273 HRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQ 332
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+HA + K G+ + V N LI Y K SDA+ V+ E ++++ ++I +
Sbjct: 333 VHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDH 392
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
E ++F MLR+GL PD F + L C+ + +G +H +K + S+ F GN
Sbjct: 393 GEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNA 452
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ Y+K I +AE AF + E+ ++SW+ I + ++ L +F M D G+ P
Sbjct: 453 LVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMV-DEGINP 511
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ T S+L AC V K+ + M +++ + ++++ + G + + +L
Sbjct: 512 NHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMEL 571
Query: 361 FNEM-LHRNVVSWNTIIAA---HANHRLGG-SALKLF 392
N M N W ++ A H + LG +A KLF
Sbjct: 572 VNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLF 608
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 116/212 (54%), Gaps = 3/212 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++++L + +A +HA K+G D V N +++ Y KC + A +VF+E
Sbjct: 313 TLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEEC 372
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
S ++++ ++MI+ Q A++ F +M L P+ ++ +S ++ACA + + +G+
Sbjct: 373 SSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGK 432
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HA+ +K + S +F GN+L+ Y K G DA L + E +VS++A+I G ++
Sbjct: 433 QVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHG 492
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
++ E+F M+ +G+ P+ + L C+
Sbjct: 493 HGKRALELFGRMVDEGINPNHITMTSVLCACN 524
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/573 (36%), Positives = 327/573 (57%), Gaps = 4/573 (0%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S +++ C+ ++ + G +HA V++MG + DV +N ++++Y K G++ +A +F++M +
Sbjct: 206 SCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPD 265
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
++VSW+A+ISG G A+E QM L+PN ++ +S + ACAG + G+QI
Sbjct: 266 SDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQI 325
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H + +K S ++G L+ MY K + DA+ V+ +L+ +NALI+G +
Sbjct: 326 HGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRH 385
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
++ F +F + ++GL +R + A L+ + +H L K + V N +
Sbjct: 386 DEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGL 445
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ Y K + + +A + F D+I+ + I A S C E + +F EM G+ PD
Sbjct: 446 IDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLR-KGLEPD 504
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
F +S+L ACA L++ + GKQ+HAHLI+ + D GNALV YAKCG I + F+
Sbjct: 505 PFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFS 564
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+ R VVSW+ +I A H G AL+LF +M GI P+ +T +L ACNHAGLV E
Sbjct: 565 SLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDE 624
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
+ YFNSM++ +GI EH++C+IDLLGRAGKL +A E P + V G LL A
Sbjct: 625 AKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGAS 684
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
R+ +D +G+ A++LF L+P + +VLL+N YAS GMW +VA RK++KDS +KKEP+
Sbjct: 685 RVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPA 744
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S +EV+ F V + SH EI L L
Sbjct: 745 MSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDEL 777
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 223/410 (54%), Gaps = 5/410 (1%)
Query: 19 QQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM-SERNLVSWSAMISG 77
Q G +HA + G DV V+N ++ +Y G M AR+VFDE SERN VSW+ ++S
Sbjct: 117 QLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSA 176
Query: 78 HHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
+ + + A++ F +M + P E+ F+ ++AC G +++ G+Q+HA ++ GY
Sbjct: 177 YVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKD 236
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
F N+L+ MY+K+G A +++ + + ++VS+NALI+G V N + E+ M
Sbjct: 237 VFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKS 296
Query: 195 QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGE 254
GL+P+ F + L+ C+ + G +H +K +S+ ++G ++ +Y+K + + +
Sbjct: 297 SGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDD 356
Query: 255 AEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA 314
A K F + +DLI WN I+ CSH +++ S+F + + G+ + T A++L + A
Sbjct: 357 AMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKE-GLGVNRTTLAAVLKSTA 415
Query: 315 GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNT 374
L + +Q+HA ++ D V N L++ Y KC +S + ++F E ++++ +
Sbjct: 416 SLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTS 475
Query: 375 IIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+I A + G A+KLF +M G++PD LL AC ++G+
Sbjct: 476 MITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGK 525
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 124/416 (29%), Positives = 215/416 (51%), Gaps = 10/416 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A +IS L + +AL G LHA +LK G + NH+++ Y+KC + AR+VFD
Sbjct: 4 AGTISQQLTRYAAAQALLPGAHLHANLLKSGFLASL--RNHLISFYSKCRRPCCARRVFD 61
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
E+ + VSWS++++ + G A++ F M + NE+ + Q
Sbjct: 62 EIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQ---L 118
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA-FEPNLVSFNALIAGFV 177
G Q+HA ++ G+ S FV N+L++MY G+ DA V+ EA E N VS+N L++ +V
Sbjct: 119 GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYV 178
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+N Q +VF M+ G+ P F F+ + C+ S ++ G +H + V+ E + F
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVF 238
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
N ++ +Y K + A F + + D++SWN I+ C + + + +M +
Sbjct: 239 TANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSS- 297
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G+ P+ F +SIL ACAG + G+QIH +I+ + D +G LV+MYAK + +
Sbjct: 298 GLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDA 357
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
K+F+ M HR+++ WN +I+ ++ A +F ++ G+ + T +L +
Sbjct: 358 MKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKS 413
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 191/397 (48%), Gaps = 10/397 (2%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+SS+L C+ A G +H ++K D + ++++YAK + A KVFD MS
Sbjct: 306 LSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMS 365
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQ 121
R+L+ W+A+ISG G H A F + L N A+ + + A +++ +Q
Sbjct: 366 HRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQ 425
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+HA + K G+ + V N LI Y K SDA+ V+ E ++++ ++I +
Sbjct: 426 VHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDH 485
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
E ++F MLR+GL PD F + L C+ + +G +H +K + S+ F GN
Sbjct: 486 GEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNA 545
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ Y+K I +AE AF + E+ ++SW+ I + ++ L +F M D G+ P
Sbjct: 546 LVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMV-DEGINP 604
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ T S+L AC V K+ + M +++ + ++++ + G + + +L
Sbjct: 605 NHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMEL 664
Query: 361 FNEM-LHRNVVSWNTIIAA---HANHRLGG-SALKLF 392
N M N W ++ A H + LG +A KLF
Sbjct: 665 VNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLF 701
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 116/212 (54%), Gaps = 3/212 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++++L + +A +HA K+G D V N +++ Y KC + A +VF+E
Sbjct: 406 TLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEEC 465
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
S ++++ ++MI+ Q A++ F +M L P+ ++ +S ++ACA + + +G+
Sbjct: 466 SSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGK 525
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HA+ +K + S +F GN+L+ Y K G DA L + E +VS++A+I G ++
Sbjct: 526 QVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHG 585
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
++ E+F M+ +G+ P+ + L C+
Sbjct: 586 HGKRALELFGRMVDEGINPNHITMTSVLCACN 617
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 82/177 (46%), Gaps = 6/177 (3%)
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T + L A ++ G +HA+L++ + N L++ Y+KC C+ ++F+E+
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHANLLKSGFL--ASLRNHLISFYSKCRRPCCARRVFDEI 63
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
VSW++++ A++N+ L SA++ F M+A G+ + +L A L
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQL----G 119
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
A ++M G D+ L+ + G G + +A + ++ + L+SA
Sbjct: 120 AQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSA 176
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/576 (36%), Positives = 328/576 (56%), Gaps = 5/576 (0%)
Query: 5 ISSLLHH-CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
I SL H C + G LH +K G+ V V + +L++Y K GK+ R+VF EM
Sbjct: 118 ILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEM 177
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
RN+VSW+A+I+G +AG + AL +FS+M + + Y FA A+ ACA +L G+
Sbjct: 178 PMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGR 237
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+IHA ++K G+ SFV N+L +MY K G L ++ + ++VS+ +I V+
Sbjct: 238 EIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMG 297
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
Q E + F M + P+ ++FA + C+ + G LH L + L ++ V N
Sbjct: 298 QEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVEN 357
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+IM +Y+K + + F + +D++SW+T IA + + M + G +
Sbjct: 358 SIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRME-GPK 416
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P +F AS+L+AC +A ++HGKQ+HA+++ + L V +AL+NMY KCG I + ++
Sbjct: 417 PTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRI 476
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+ + ++VSW +I +A H + LFE++ G++PDSVTFIG+L+AC+HAGLV
Sbjct: 477 FDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLV 536
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
G YFN+M K Y ISP EH+ C+IDLL RAG+L +AE + P +D +V TLL
Sbjct: 537 DLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLR 596
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ DV G R A+++ L+P ++ L+N+YAS G W + A RK++K G+ KE
Sbjct: 597 ACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKE 656
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
P +S I+V+ F + SH + +I ML L+
Sbjct: 657 PGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLA 692
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 227/437 (51%), Gaps = 20/437 (4%)
Query: 34 QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQ 93
Q D+ SN L K G + AR++FD+MS+++ +SW+ +ISG+ A + AL F
Sbjct: 46 QTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKN 105
Query: 94 MH----LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
M L + +I + A AC + G+ +H Y++K G + FVG++L+ MY K G
Sbjct: 106 MRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNG 165
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
+ V+ E N+VS+ A+I G V ++ F M R + D ++FA L+
Sbjct: 166 KIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALK 225
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE---KD 266
C+ S L G +H +K + + FV NT+ +Y+K G+ E L E+ +D
Sbjct: 226 ACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNK---CGKLEYGLTLFEKMSMRD 282
Query: 267 LISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
++SW T I E + F M + V P+++TFA++++ CA LA ++ G+Q+H
Sbjct: 283 VVSWTTIITTLVQMGQEECAVQAFIRM-RESDVSPNEYTFAAVISGCANLARIEWGEQLH 341
Query: 327 AHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGG 386
A ++ + L + V N+++ MYAKCG ++ S +F+EM R++VSW+TIIA +
Sbjct: 342 ALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVS 401
Query: 387 SALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEH---- 442
A +L M+ G KP +L+AC + +++ G+ Y +S +EH
Sbjct: 402 EAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQL-----HAYVLSIGLEHTAMV 456
Query: 443 FTCLIDLLGRAGKLLEA 459
+ LI++ + G + EA
Sbjct: 457 LSALINMYCKCGSIEEA 473
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 153/288 (53%), Gaps = 5/288 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++++ C+ ++ G LHA +L +G+ + V N ++ +YAKCG++ + +F EM
Sbjct: 320 TFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEM 379
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+ R++VSWS +I+G+ Q G A E S M + P E+ AS +SAC + L G+
Sbjct: 380 TRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGK 439
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HAY L G + V ++LI+MY K G +A ++ A ++VS+ A+I G+ E+
Sbjct: 440 QLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHG 499
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVG 239
+ ++F+ + R GL PD +F G L CS + + G + ++ K ++ +
Sbjct: 500 YSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHY 559
Query: 240 NTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKG 286
++ L + + +AE + +D + W+T + AC D E+G
Sbjct: 560 GCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERG 607
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 2/133 (1%)
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
D+ N + K G + + ++F++M ++ +SW T+I+ + N AL LF+ M+
Sbjct: 48 DLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMR 107
Query: 397 A-TGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGK 455
+G++ D AC V GE KT G+ + + L+D+ + GK
Sbjct: 108 VESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKT-GLVNSVFVGSALLDMYTKNGK 166
Query: 456 LLEAEEYTKKFPL 468
+ E + P+
Sbjct: 167 IFEGRRVFHEMPM 179
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/573 (35%), Positives = 326/573 (56%), Gaps = 4/573 (0%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+SL C+ AL+ G LH+ LK D+IV L++YAKCG+M A+KV M +
Sbjct: 286 ASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPK 345
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFS---QMHLLPNEYIFASAISACAGIQSLVKGQQI 122
+L S++A+I G+ ++ AL+ F + L +E + A++ACA I+ ++G+Q+
Sbjct: 346 CSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQV 405
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H ++K S V N+++ MY K ++A ++ + VS+NA+IA +N
Sbjct: 406 HGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNE 465
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E+ F M+ + PD F++ L+ C+ L GM +H +K + + FVG +
Sbjct: 466 EETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAAL 525
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y K +I +A+K E+K ++SWN I+ S E F M + GV PD
Sbjct: 526 VDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRML-EMGVNPD 584
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+FT+A++L CA LA+V GKQIHA +I+ L DV + + LV+MY+KCG + S +F
Sbjct: 585 NFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFE 644
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+ +R+ V+WN ++ +A+H LG ALKLFE M+ +KP+ TF+ +L AC H GLV +
Sbjct: 645 KAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDK 704
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G YF+ M YG+ P EH++C++D+LGR+G++ EA +K P D ++ LLS C
Sbjct: 705 GLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVC 764
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
++ +V + E+ + L L P +S VLLSN+YA GMWG+V+ RKM++ + LKKEP
Sbjct: 765 KIHGNVEVAEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPG 824
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S IE++ F V + H + EI L L
Sbjct: 825 CSWIELKDEVHAFLVGDKGHPRDEEIYEKLGVL 857
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/468 (32%), Positives = 255/468 (54%), Gaps = 7/468 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S++ +L C + G+ +H V+K G DV+ + +L +YAKC ++ + VF E+
Sbjct: 183 SLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSEL 242
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQ 120
E+N VSWSAMI+G Q ++ LE F +M + ++ I+AS +CA + +L G+
Sbjct: 243 PEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGK 302
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H+++LK + S VG + + MY K G +DA V + +L S+NA+I G+ +
Sbjct: 303 ELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSD 362
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC-SVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ + + F+L+L+ GL D + +G L C S+ DL +G +H L VK SN V
Sbjct: 363 RGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDL-EGRQVHGLAVKSISMSNICVA 421
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N I+ +Y K + EA F ++E +D +SWN IAAC + E+ L+ F M + +
Sbjct: 422 NAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSR-M 480
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
PDDFT+ S+L ACAG ++ G +IH +I+ + D VG ALV+MY KCG+I + K
Sbjct: 481 EPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADK 540
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+ + + +VSWN II+ + + A K F +M G+ PD+ T+ +L C +
Sbjct: 541 IHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLAT 600
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
V G+ + K + D+ + L+D+ + G + +++ +K P
Sbjct: 601 VGLGKQIHAQIIKQE-LQSDVYICSTLVDMYSKCGNMQDSQLMFEKAP 647
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 140/495 (28%), Positives = 235/495 (47%), Gaps = 40/495 (8%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNL---------------- 46
++ S + CSK +L G HA ++ G +P VSN ++ +
Sbjct: 50 RTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDK 109
Query: 47 ---------------YAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFF 91
YA CG+M +ARK F EM ER++VSW+++ISG Q GE +++ F
Sbjct: 110 MYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVF 169
Query: 92 SQMHLLPNEYIFAS---AISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKV 148
+M + AS + AC ++ G Q+H +KFG+ G++L+ MY K
Sbjct: 170 LEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKC 229
Query: 149 GYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGL 208
D+L V+ E E N VS++A+IAG V+N + +G E+FK M G+ + +A
Sbjct: 230 KRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLF 289
Query: 209 EICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLI 268
C+ + LR G LH +K S+ VG + +Y+K + +A+K + + L
Sbjct: 290 RSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQ 349
Query: 269 SWNTFIAACSHCADYEKGLSVFK--EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
S+N I A ++G K ++ G+ D+ T + L ACA + G+Q+H
Sbjct: 350 SYNAIIVG---YARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVH 406
Query: 327 AHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGG 386
++ ++ V NA+++MY KC ++ + LF+ M R+ VSWN IIAA +
Sbjct: 407 GLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEE 466
Query: 387 SALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCL 446
L F M + ++PD T+ +L AC + G + K+ G+ D L
Sbjct: 467 ETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKS-GMGFDSFVGAAL 525
Query: 447 IDLLGRAGKLLEAEE 461
+D+ + G + +A++
Sbjct: 526 VDMYCKCGMIEKADK 540
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 198/412 (48%), Gaps = 34/412 (8%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
F+ C+ SL G+Q HA + G+ +FV N L+ MY+K Y A V+ + +
Sbjct: 52 FSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKMY 111
Query: 163 -------------------------------EPNLVSFNALIAGFVENQQPEKGFEVFKL 191
E ++VS+N++I+GF++N + K +VF
Sbjct: 112 LRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLE 171
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
M R G+ DR S A L+ C + G+ +H L VK + + G+ ++ +Y+K
Sbjct: 172 MGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKR 231
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ ++ F + EK+ +SW+ IA C +GL +FKEM GV +AS+
Sbjct: 232 LDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQG-VGVGVSQSIYASLFR 290
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
+CA L++++ GK++H+H ++ D+ VG A ++MYAKCG ++ + K+ + M ++ S
Sbjct: 291 SCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQS 350
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
+N II +A G ALK F+ + TG+ D +T G L AC EG
Sbjct: 351 YNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAV 410
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
K+ +S +I ++D+ G+ L EA + +D + +++AC
Sbjct: 411 KSISMS-NICVANAILDMYGKCKALAEASDLFDMMER-RDAVSWNAIIAACE 460
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/575 (35%), Positives = 327/575 (56%), Gaps = 4/575 (0%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L+ S AL+ G ++H+ +L G + D V ++ +YAKCG R+VF+++ R
Sbjct: 232 SVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNR 291
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
+L++W+ MI G + G A E ++QM ++PN+ + ++AC +L G++IH
Sbjct: 292 DLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIH 351
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ K G+ S V N+LISMY + G DA LV+ + +++S+ A+I G ++
Sbjct: 352 SRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGA 411
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ V++ M + G+ P+R ++ L CS L G +H V+ L ++ VGNT++
Sbjct: 412 EALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLV 471
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+YS + +A + F + ++D++++N I + ++ L +F + + G++PD
Sbjct: 472 NMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRL-QEEGLKPDK 530
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T+ ++L ACA S++ ++IH + + D VGNALV+ YAKCG S + +F +
Sbjct: 531 VTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEK 590
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M RNV+SWN II A H G AL+LFE+MK G+KPD VTF+ LL+AC+HAGL++EG
Sbjct: 591 MTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEG 650
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
YF SM + + I P IEH+ C++DLLGRAG+L EAE K P + + G LL ACR
Sbjct: 651 RRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACR 710
Query: 484 LRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSY 543
+ +V + ER A+ L YV LS++YA+ GMW A RK+++ G+ KEP
Sbjct: 711 IHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGR 770
Query: 544 SMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSLA 578
S I+V F + SH + +I L L+ A
Sbjct: 771 SWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHA 805
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 154/481 (32%), Positives = 264/481 (54%), Gaps = 9/481 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I S L C AL+ G +H ++ G+ DV V+N +LN+YAKCG + AR+VFD+M
Sbjct: 128 TIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKM 187
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
++++VSW+ I G+ G A E F +M ++PN + S ++A + +L G+
Sbjct: 188 EKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGK 247
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H+ L G+ S + VG +L+ MY K G D V+ + +L+++N +I G E
Sbjct: 248 AVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGG 307
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E+ EV+ M R+G++P++ ++ L C S L G +H K S+ V N
Sbjct: 308 YWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQN 367
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++++YS+ I +A F + KD+ISW I + + L+V++EM GV
Sbjct: 368 ALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQ-AGVE 426
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P+ T+ SIL AC+ A+++ G++IH ++ L D VGN LVNMY+ CG + + ++
Sbjct: 427 PNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQV 486
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+ M+ R++V++N +I +A H LG ALKLF++++ G+KPD VT+I +L AC ++G +
Sbjct: 487 FDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSL 546
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA----EEYTKKFPLGQDPIVLG 476
E +++ + G D L+ + G +A E+ TK+ + + I+ G
Sbjct: 547 -EWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGG 605
Query: 477 T 477
+
Sbjct: 606 S 606
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 245/459 (53%), Gaps = 7/459 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS--E 65
+L C + K L G +H +++ PD N ++N+Y +CG + AR+V+ ++S E
Sbjct: 29 MLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYME 88
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
R + SW+AM+ G+ Q G AL+ QM L P+ S +S+C +L G++I
Sbjct: 89 RTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREI 148
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H +++ G V N +++MY K G +A V+ + + ++VS+ I G+ + +
Sbjct: 149 HFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRS 208
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E FE+F+ M ++G++P+R ++ L S L+ G +H + ES+ VG +
Sbjct: 209 ETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTAL 268
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y+K + + F + +DLI+WNT I + +E+ V+ +M + GV P+
Sbjct: 269 VKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQRE-GVMPN 327
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
T+ +L AC A++ GK+IH+ + + D+GV NAL++MY++CG I + +F+
Sbjct: 328 KITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFD 387
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+M+ ++V+SW +I A G AL ++++M+ G++P+ VT+ +L AC+ ++
Sbjct: 388 KMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEW 447
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
G + + G++ D L+++ G + +A +
Sbjct: 448 GRRIHQQVVEA-GLATDAHVGNTLVNMYSMCGSVKDARQ 485
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 193/375 (51%), Gaps = 4/375 (1%)
Query: 88 LEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMK 147
+++ Q N + + C ++ LV G+Q+H + ++ + N+LI+MY++
Sbjct: 11 VQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQ 70
Query: 148 VGYSSDALLVYGEA--FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA 205
G +A V+ + E + S+NA++ G+++ EK ++ + M + GL PDR +
Sbjct: 71 CGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIM 130
Query: 206 GGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK 265
L C L G +H ++ L + V N I+ +Y+K I EA + F +E+K
Sbjct: 131 SFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKK 190
Query: 266 DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
++SW I + C E +F++M + GV P+ T+ S+L A + A+++ GK +
Sbjct: 191 SVVSWTITIGGYADCGRSETAFEIFQKMEQE-GVVPNRITYISVLNAFSSPAALKWGKAV 249
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
H+ ++ D VG ALV MYAKCG ++F ++++R++++WNT+I A
Sbjct: 250 HSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYW 309
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
A +++ QM+ G+ P+ +T++ LL AC ++ + G+ + + K G + DI
Sbjct: 310 EEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKA-GFTSDIGVQNA 368
Query: 446 LIDLLGRAGKLLEAE 460
LI + R G + +A
Sbjct: 369 LISMYSRCGSIKDAR 383
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 91/173 (52%), Gaps = 5/173 (2%)
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
G + + + +L C + + G+Q+H H+I+ R D NAL+NMY +CG I
Sbjct: 17 QGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEE 76
Query: 357 SYKLFNEM--LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ +++ ++ + R V SWN ++ + + ALKL QM+ G+ PD T + L++C
Sbjct: 77 ARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSC 136
Query: 415 NHAGLVKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
G ++ G E +F +M+ G+ D++ C++++ + G + EA E K
Sbjct: 137 KSPGALEWGREIHFQAMQA--GLLFDVKVANCILNMYAKCGSIEEAREVFDKM 187
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/577 (35%), Positives = 337/577 (58%), Gaps = 8/577 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMIL-ARKVFDEM 63
++LL CS G+++ A +LK G V V +++++ K G I AR VFD+M
Sbjct: 149 TALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKM 208
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+NLV+W+ MI+ + Q G A++ F ++ P+++ S +SAC ++ G+
Sbjct: 209 QHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGK 268
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H++ ++ G AS FVG +L+ MY K ++ ++ N++S+ ALI+G+V+++
Sbjct: 269 QLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSR 328
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
Q ++ ++F ML + P+ F+F+ L+ C+ D G LH T+K L + VGN
Sbjct: 329 QEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGN 388
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +Y++ + A KAF ++ EK+LIS+NT A + D ++ F GV
Sbjct: 389 SLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDES---FNHEVEHTGVG 445
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
FT+A +L+ A + ++ G+QIHA +++ ++ + NAL++MY+KCG + ++
Sbjct: 446 ASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQV 505
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN+M +RNV++W +II+ A H AL+LF +M G+KP+ VT+I +L+AC+H GL+
Sbjct: 506 FNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLI 565
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
E +FNSM + ISP +EH+ C++DLLGR+G LLEA E+ P D +V T L
Sbjct: 566 DEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLG 625
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
+CR+ R+ +GE AK++ +P + Y+LLSNLYAS+G W DVA RK +K L KE
Sbjct: 626 SCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKE 685
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
YS IEV KF V + SH + +I L L+L
Sbjct: 686 TGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELAL 722
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 131/431 (30%), Positives = 217/431 (50%), Gaps = 17/431 (3%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS- 64
S LL C ++ L+ G LH ++ G+ D ++ N ++ LY+KCG A +F M
Sbjct: 43 SLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGH 102
Query: 65 -ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL--------PNEYIFASAISACAGIQS 115
+R+LVSWSA+IS A + + + +H+L PNEY F + + +C+
Sbjct: 103 HKRDLVSWSAIISCF--ANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLF 160
Query: 116 LVKGQQIHAYSLKFGY-ASISFVGNSLISMYMKVGYS-SDALLVYGEAFEPNLVSFNALI 173
G I A+ LK GY S VG +LI M+ K G A +V+ + NLV++ +I
Sbjct: 161 FTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMI 220
Query: 174 AGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE 233
+ + + ++F +L PD+F+ L C G LH ++ L
Sbjct: 221 TRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLA 280
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
S+ FVG T++ +Y+K + + K F + +++SW I+ ++ + +F M
Sbjct: 281 SDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNM 340
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
+ H V P+ FTF+S+L ACA L GKQ+H I++ L+ VGN+L+NMYA+ G
Sbjct: 341 LHGH-VTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGT 399
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ C+ K FN + +N++S+NT AA AN + S +++ TG+ T+ LL+
Sbjct: 400 MECARKAFNILFEKNLISYNT--AADANAKALDSDESFNHEVEHTGVGASPFTYACLLSG 457
Query: 414 CNHAGLVKEGE 424
G + +GE
Sbjct: 458 AACIGTIVKGE 468
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 203/398 (51%), Gaps = 17/398 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++SLL C + + G LH+ V++ G+ DV V ++++YAK + +RK+F+ M
Sbjct: 250 TLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTM 309
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
N++SW+A+ISG+ Q+ + A++ F M H+ PN + F+S + ACA + G+
Sbjct: 310 LHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGK 369
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H ++K G ++I+ VGNSLI+MY + G A + FE NL+S+N +
Sbjct: 370 QLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKAL 429
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
++ F + G+ F++A L + + KG +H L VK +N + N
Sbjct: 430 DSDESFN--HEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINN 487
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++++YSK A + F + +++I+W + I+ + K L +F EM + GV+
Sbjct: 488 ALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEML-EIGVK 546
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG----NALVNMYAKCGLISC 356
P++ T+ ++L+AC+ + + + H M N + +V++ + GL+
Sbjct: 547 PNEVTYIAVLSACSHVGLIDEAWK---HFNSMHYNHSISPRMEHYACMVDLLGRSGLLLE 603
Query: 357 SYKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSALK 390
+ + N M + + W T + + H N +LG A K
Sbjct: 604 AIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAK 641
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/566 (36%), Positives = 323/566 (57%), Gaps = 4/566 (0%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S +++ C+ ++ ++ G +HA V++MG DV +N ++++Y K G++ +A +F++M +
Sbjct: 206 SCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPD 265
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
++VSW+A+ISG G A+E QM L+PN + +S + AC+G + G+QI
Sbjct: 266 SDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQI 325
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H + +K S ++G L+ MY K + DA V+ F +L+ NALI+G +
Sbjct: 326 HGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRH 385
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
++ +F + ++GL +R + A L+ + +H L VK + V N +
Sbjct: 386 DEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGL 445
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ Y K + + +A + F D+I+ + I A S C E + +F EM G+ PD
Sbjct: 446 IDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLR-KGLEPD 504
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
F +S+L ACA L++ + GKQ+HAHLI+ + D GNALV YAKCG I + F+
Sbjct: 505 PFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFS 564
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+ R VVSW+ +I A H G AL+LF +M GI P+ +T +L ACNHAGLV E
Sbjct: 565 SLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDE 624
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
+ YFNSM++ +GI EH++C+IDLLGRAGKL +A E P + + G LL A
Sbjct: 625 AKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGAS 684
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
R+ +D +G+ A++LF L+P + +VLL+N YAS GMW +VA RK++KDS +KKEP+
Sbjct: 685 RVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPA 744
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEI 568
S IEV+ F V + SH EI
Sbjct: 745 MSWIEVKDKVHTFIVGDKSHPMTKEI 770
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 225/408 (55%), Gaps = 5/408 (1%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM-SERNLVSWSAMISGHH 79
G +HA + G DV V+N ++ +Y G M AR+VF+E SERN VSW+ ++S +
Sbjct: 119 GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYV 178
Query: 80 QAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF 136
+ + A++ F +M + P E+ F+ ++AC G +++ G+Q+HA ++ GY F
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVF 238
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
N+L+ MYMK+G A +++ + + ++VS+NALI+G V N + E+ M G
Sbjct: 239 TANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSG 298
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
L+P+ F+ + L+ CS + G +H +K +S+ ++G ++ +Y+K + + +A
Sbjct: 299 LVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAR 358
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
K F + +DLI N I+ CSH +++ LS+F E+ + G+ + T A++L + A L
Sbjct: 359 KVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKE-GLGVNRTTLAAVLKSTASL 417
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
+ +Q+HA +++ D V N L++ Y KC +S + ++F E ++++ ++I
Sbjct: 418 EAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMI 477
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
A + G A+KLF +M G++PD LL AC ++G+
Sbjct: 478 TALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGK 525
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 125/416 (30%), Positives = 217/416 (52%), Gaps = 10/416 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A +IS L + +AL G LHA++LK G NH+++ Y+KC + AR+VFD
Sbjct: 4 AGTISQQLTRYAAAQALLPGAHLHASLLKSGSLASF--RNHLISFYSKCRRPCCARRVFD 61
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
E+ + VSWS++++ + G A++ F M + NE+ + C L
Sbjct: 62 EIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVPDARL-- 118
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA-FEPNLVSFNALIAGFV 177
G Q+HA ++ G+ S FV N+L++MY G+ DA V+ EA E N VS+N L++ +V
Sbjct: 119 GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYV 178
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+N Q +VF M+ G+ P F F+ + C+ S ++ G +H + V+ + + F
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVF 238
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
N ++ +Y K + A F + + D++SWN I+ C + + + +M
Sbjct: 239 TANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYS- 297
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G+ P+ FT +SIL AC+G + G+QIH +I+ + D +G LV+MYAK + +
Sbjct: 298 GLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDA 357
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
K+F+ M HR+++ N +I+ ++ AL LF +++ G+ + T +L +
Sbjct: 358 RKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKS 413
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 193/398 (48%), Gaps = 10/398 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+L CS A G +H ++K D + ++++YAK + ARKVFD M
Sbjct: 305 TLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWM 364
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
R+L+ +A+ISG G H AL F ++ L N A+ + + A +++ +
Sbjct: 365 FHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTR 424
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HA ++K G+ + V N LI Y K SDA V+ E ++++ ++I +
Sbjct: 425 QVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCD 484
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E ++F MLR+GL PD F + L C+ + +G +H +K + S+ F GN
Sbjct: 485 HGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGN 544
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ Y+K I +AE AF + E+ ++SW+ I + ++ L +F M D G+
Sbjct: 545 ALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMV-DEGIN 603
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKCGLISCSYK 359
P+ T S+L AC V K+ + M +++ + ++++ + G + + +
Sbjct: 604 PNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAME 663
Query: 360 LFNEM-LHRNVVSWNTIIAA---HANHRLGG-SALKLF 392
L N M N W ++ A H + LG +A KLF
Sbjct: 664 LVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLF 701
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 80/177 (45%), Gaps = 6/177 (3%)
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T + L A ++ G +HA L++ N L++ Y+KC C+ ++F+E+
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKS--GSLASFRNHLISFYSKCRRPCCARRVFDEI 63
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
VSW++++ A++N+ L SA++ F M+A G+ + +L A L
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARL----G 119
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
A ++M G D+ L+ + G G + +A + ++ + L+SA
Sbjct: 120 AQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSA 176
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/566 (36%), Positives = 323/566 (57%), Gaps = 4/566 (0%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S +++ C+ ++ ++ G +HA V++MG DV +N ++++Y K G++ +A +F++M +
Sbjct: 206 SCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPD 265
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
++VSW+A+ISG G A+E QM L+PN + +S + AC+G + G+QI
Sbjct: 266 SDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQI 325
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H + +K S ++G L+ MY K + DA V+ F +L+ NALI+G +
Sbjct: 326 HGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRH 385
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
++ +F + ++GL +R + A L+ + +H L VK + V N +
Sbjct: 386 DEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGL 445
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ Y K + + +A + F D+I+ + I A S C E + +F EM G+ PD
Sbjct: 446 IDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLR-KGLEPD 504
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
F +S+L ACA L++ + GKQ+HAHLI+ + D GNALV YAKCG I + F+
Sbjct: 505 PFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFS 564
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+ R VVSW+ +I A H G AL+LF +M GI P+ +T +L ACNHAGLV E
Sbjct: 565 SLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDE 624
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
+ YFNSM++ +GI EH++C+IDLLGRAGKL +A E P + + G LL A
Sbjct: 625 AKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGAS 684
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
R+ +D +G+ A++LF L+P + +VLL+N YAS GMW +VA RK++KDS +KKEP+
Sbjct: 685 RVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPA 744
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEI 568
S IEV+ F V + SH EI
Sbjct: 745 MSWIEVKDKVHTFIVGDKSHPMTKEI 770
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 225/408 (55%), Gaps = 5/408 (1%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM-SERNLVSWSAMISGHH 79
G +HA + G DV V+N ++ +Y G M AR+VF+E SERN VSW+ ++S +
Sbjct: 119 GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYV 178
Query: 80 QAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF 136
+ + A++ F +M + P E+ F+ ++AC G +++ G+Q+HA ++ GY F
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVF 238
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
N+L+ MYMK+G A +++ + + ++VS+NALI+G V N + E+ M G
Sbjct: 239 TANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSG 298
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
L+P+ F+ + L+ CS + G +H +K +S+ ++G ++ +Y+K + + +A
Sbjct: 299 LVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAR 358
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
K F + +DLI N I+ CSH +++ LS+F E+ + G+ + T A++L + A L
Sbjct: 359 KVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKE-GLGVNRTTLAAVLKSTASL 417
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
+ +Q+HA +++ D V N L++ Y KC +S + ++F E ++++ ++I
Sbjct: 418 EAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMI 477
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
A + G A+KLF +M G++PD LL AC ++G+
Sbjct: 478 TALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGK 525
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/416 (29%), Positives = 216/416 (51%), Gaps = 10/416 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A +IS L + +AL G LHA++LK G NH+++ Y+KC + AR+ FD
Sbjct: 4 AGTISQQLTRYAAAQALLPGAHLHASLLKSGSLASF--RNHLISFYSKCRRPCCARRFFD 61
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
E+ + VSWS++++ + G A++ F M + NE+ + C L
Sbjct: 62 EIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVPDARL-- 118
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA-FEPNLVSFNALIAGFV 177
G Q+HA ++ G+ S FV N+L++MY G+ DA V+ EA E N VS+N L++ +V
Sbjct: 119 GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYV 178
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+N Q +VF M+ G+ P F F+ + C+ S ++ G +H + V+ + + F
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVF 238
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
N ++ +Y K + A F + + D++SWN I+ C + + + +M
Sbjct: 239 TANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYS- 297
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G+ P+ FT +SIL AC+G + G+QIH +I+ + D +G LV+MYAK + +
Sbjct: 298 GLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDA 357
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
K+F+ M HR+++ N +I+ ++ AL LF +++ G+ + T +L +
Sbjct: 358 RKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKS 413
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 193/398 (48%), Gaps = 10/398 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+L CS A G +H ++K D + ++++YAK + ARKVFD M
Sbjct: 305 TLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWM 364
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
R+L+ +A+ISG G H AL F ++ L N A+ + + A +++ +
Sbjct: 365 FHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTR 424
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HA ++K G+ + V N LI Y K SDA V+ E ++++ ++I +
Sbjct: 425 QVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCD 484
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E ++F MLR+GL PD F + L C+ + +G +H +K + S+ F GN
Sbjct: 485 HGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGN 544
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ Y+K I +AE AF + E+ ++SW+ I + ++ L +F M D G+
Sbjct: 545 ALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMV-DEGIN 603
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKCGLISCSYK 359
P+ T S+L AC V K+ + M +++ + ++++ + G + + +
Sbjct: 604 PNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAME 663
Query: 360 LFNEM-LHRNVVSWNTIIAA---HANHRLGG-SALKLF 392
L N M N W ++ A H + LG +A KLF
Sbjct: 664 LVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLF 701
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 79/177 (44%), Gaps = 6/177 (3%)
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T + L A ++ G +HA L++ N L++ Y+KC C+ + F+E+
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKS--GSLASFRNHLISFYSKCRRPCCARRFFDEI 63
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
VSW++++ A++N+ L SA++ F M+A G+ + +L A L
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARL----G 119
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
A ++M G D+ L+ + G G + +A + ++ + L+SA
Sbjct: 120 AQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSA 176
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/579 (36%), Positives = 336/579 (58%), Gaps = 5/579 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+S +L C G +H +K G DV V ++++Y K + +VFDEM
Sbjct: 94 SLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEM 153
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+N+VSW+++++G+ Q G + AL+ FSQM L PN + FA+ + A ++ KG
Sbjct: 154 RVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGV 213
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H +K G S FVGNS+++MY K SDA V+ N VS+N++IAGFV N
Sbjct: 214 QVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNG 273
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ FE+F M +G+ + FA +++C+ ++ LHC +K + + +
Sbjct: 274 LDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKT 333
Query: 241 TIMALYSKFNLIGEAEKAFRLIEE-KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+M YSK + I +A K F ++ ++++SW I+ ++ +++F +M + GV
Sbjct: 334 ALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGV 393
Query: 300 RPDDFTFASILAACAG-LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
P++FTF+S+L ACA ASV+ GKQ H+ I+ + + V +ALV MYAK G I +
Sbjct: 394 EPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESAN 453
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
++F + R++VSWN++I+ +A H G +LK+FE+M++ ++ D +TFIG+++AC HAG
Sbjct: 454 EVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAG 513
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV EG+ YF+ M K Y I P +EH++C++DL RAG L +A + K P + TL
Sbjct: 514 LVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTL 573
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L+ACR+ +V +GE A++L LQP ++ YVLLSN+YA+ G W + A RK++ +K
Sbjct: 574 LAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVK 633
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
KE YS IEV+ F + SH + I L+ LS+
Sbjct: 634 KEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSI 672
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 137/258 (53%), Gaps = 1/258 (0%)
Query: 157 VYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSND 216
++ E + L N L+ F N Q ++ +F + R G D S + L++C D
Sbjct: 48 LFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFD 107
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
G +HC +KC + VG +++ +Y K + + E+ F + K+++SW + +A
Sbjct: 108 RIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAG 167
Query: 277 CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
E+ L +F +M + G++P+ FTFA++L A +V+ G Q+H +I+ L+
Sbjct: 168 YRQNGLNEQALKLFSQMQLE-GIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDS 226
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
+ VGN++VNMY+K ++S + +F+ M +RN VSWN++IA + L A +LF +M+
Sbjct: 227 TIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMR 286
Query: 397 ATGIKPDSVTFIGLLTAC 414
G+K F ++ C
Sbjct: 287 LEGVKLTQTIFATVIKLC 304
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 69/126 (54%)
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G D + + +L C L GKQ+H I+ +DV VG +LV+MY K +
Sbjct: 87 GSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDG 146
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++F+EM +NVVSW +++A + + L ALKLF QM+ GIKP+ TF +L
Sbjct: 147 ERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAAD 206
Query: 418 GLVKEG 423
G V++G
Sbjct: 207 GAVEKG 212
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/582 (36%), Positives = 334/582 (57%), Gaps = 16/582 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+SS+++ C+ + +G +H ++K+G D +N ++++YAK G + A VF+++
Sbjct: 260 SLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKI 319
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+ ++VSW+A+I+G H ALE QM + PN + +SA+ ACAG+ G+
Sbjct: 320 KQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGR 379
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H+ +K S FV L+ MY K DA + + E +L+++NA+I+G+ +
Sbjct: 380 QLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYW 439
Query: 181 QPEKGFEVFKLMLRQGL------LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
+ + +F M ++G+ L GL++ V + H L+VK S
Sbjct: 440 EDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQV------HGLSVKSGFHS 493
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
+ +V N+++ Y K + + +AE+ F DL+S+ + I A + E+ L +F EM
Sbjct: 494 DIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEM- 552
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
D ++PD F +S+L ACA L++ + GKQ+H H+++ D+ GN+LVNMYAKCG I
Sbjct: 553 QDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSI 612
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ + F+E+ R +VSW+ +I A H G AL+LF QM G+ P+ +T + +L AC
Sbjct: 613 DDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGAC 672
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
NHAGLV E + YF SME+ +G P EH+ C+IDLLGRAGK+ EA E K P + V
Sbjct: 673 NHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASV 732
Query: 475 LGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKD 534
G LL A R+ +DV +G R A+ LF L+P + +VLL+N+YAS G W +VA R++++D
Sbjct: 733 WGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRD 792
Query: 535 SGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
S +KKEP S IEV+ F V + SH + EI L LS
Sbjct: 793 SKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELS 834
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 159/482 (32%), Positives = 264/482 (54%), Gaps = 8/482 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S S LL C TK+L+ G+ +HA + K G+ D + NH++NLY+KC ARK+ DE
Sbjct: 58 SYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDES 117
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQ 120
SE +LVSWSA+ISG+ Q G AL F +MHLL NE+ F+S + AC+ ++ L G+
Sbjct: 118 SEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGK 177
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H + G+ FV N+L+ MY K D+ ++ E E N+VS+NAL + +V+
Sbjct: 178 QVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQID 237
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ +F M+ G+ P+ FS + + C+ D +G I+H +K + +PF N
Sbjct: 238 FCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSAN 297
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y+K + +A F I++ D++SWN IA C +E+ L + +M G+
Sbjct: 298 ALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRS-GIC 356
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P+ FT +S L ACAG+ + G+Q+H+ L++M + D+ V LV+MY+KC L+ +
Sbjct: 357 PNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMA 416
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL- 419
FN + +++++WN II+ ++ + AL LF +M GI + T +L + AGL
Sbjct: 417 FNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKST--AGLQ 474
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V + + G DI LID G+ + +AE ++ +G D + +++
Sbjct: 475 VVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIG-DLVSFTSMI 533
Query: 480 SA 481
+A
Sbjct: 534 TA 535
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 155/459 (33%), Positives = 263/459 (57%), Gaps = 5/459 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+L CS K L+ G +H V+ G + DV V+N ++ +YAKC + + ++++FDE+
Sbjct: 159 TFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEI 218
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
ERN+VSW+A+ S + Q A+ F +M L PNE+ +S ++AC G++ +G+
Sbjct: 219 PERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGK 278
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IH Y +K GY F N+L+ MY KVG +DA+ V+ + +P++VS+NA+IAG V ++
Sbjct: 279 IIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHE 338
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E+ E+ M R G+ P+ F+ + L+ C+ G LH +K +ES+ FV
Sbjct: 339 HHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSV 398
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +YSK +L+ +A AF L+ EKDLI+WN I+ S + + LS+F EM + G+
Sbjct: 399 GLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKE-GIG 457
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ T ++IL + AGL V +Q+H ++ + D+ V N+L++ Y KC + + ++
Sbjct: 458 FNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERI 517
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F E ++VS+ ++I A+A + G ALKLF +M+ +KPD LL AC +
Sbjct: 518 FEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAF 577
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
++G+ + K YG DI L+++ + G + +A
Sbjct: 578 EQGKQLHVHILK-YGFVLDIFAGNSLVNMYAKCGSIDDA 615
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 201/394 (51%), Gaps = 3/394 (0%)
Query: 88 LEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMK 147
L + + P ++ +S C +SL G QIHA+ K G + + N LI++Y K
Sbjct: 44 LNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSK 103
Query: 148 VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGG 207
A + E+ EP+LVS++ALI+G+ +N F M G+ + F+F+
Sbjct: 104 CRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSV 163
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDL 267
L+ CS+ DLR G +H + V E + FV NT++ +Y+K + ++++ F I E+++
Sbjct: 164 LKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNV 223
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHA 327
+SWN + + + +F EM G++P++F+ +S++ AC GL GK IH
Sbjct: 224 VSWNALFSCYVQIDFCGEAVGLFYEMVLS-GIKPNEFSLSSMVNACTGLRDSSRGKIIHG 282
Query: 328 HLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGS 387
+LI++ + D NALV+MYAK G ++ + +F ++ ++VSWN +IA H
Sbjct: 283 YLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQ 342
Query: 388 ALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLI 447
AL+L QMK +GI P+ T L AC GL + G +S+ K + D+ L+
Sbjct: 343 ALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKM-DMESDLFVSVGLV 401
Query: 448 DLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
D+ + L +A P +D I ++S
Sbjct: 402 DMYSKCDLLEDARMAFNLLP-EKDLIAWNAIISG 434
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 162/352 (46%), Gaps = 8/352 (2%)
Query: 172 LIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK 231
LI + Q + + L+ + P S++ L C + LR G+ +H K
Sbjct: 27 LIQTVPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 232 LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK 291
L +P + N ++ LYSK G A K E DL+SW+ I+ + L F
Sbjct: 87 LSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
EM + GV+ ++FTF+S+L AC+ + ++ GKQ+H ++ DV V N LV MYAKC
Sbjct: 147 EM-HLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKC 205
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
S +LF+E+ RNVVSWN + + + G A+ LF +M +GIKP+ + ++
Sbjct: 206 DEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMV 265
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQD 471
AC G+ + K G D L+D+ + G L +A +K D
Sbjct: 266 NACTGLRDSSRGKIIHGYLIKL-GYDWDPFSANALVDMYAKVGDLADAISVFEKIK-QPD 323
Query: 472 PIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSP--YVLLSNLYASDGM 521
+ +++ C L E+ + L ++ + P + L S L A GM
Sbjct: 324 IVSWNAVIAGCVLHEH---HEQALELLGQMKRSGICPNIFTLSSALKACAGM 372
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/560 (36%), Positives = 329/560 (58%), Gaps = 5/560 (0%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C G +H ++K G+ D++V + ++ +YAKC A +F+EM E+
Sbjct: 111 SVLKACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEK 170
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIH 123
++ W+ +IS ++Q+G ALE+F M PN +AIS+CA + L +G +IH
Sbjct: 171 DVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIH 230
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ G+ SF+ ++L+ MY K G+ A+ V+ + + +V++N++I+G+
Sbjct: 231 EELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSI 290
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
++FK M +G+ P + + + +CS S L +G +H T++ +++S+ F+ +++M
Sbjct: 291 SCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLM 350
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
LY K + AE F+LI + ++SWN I+ + L +F EM + V PD
Sbjct: 351 DLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSY-VEPDA 409
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
TF S+L AC+ LA+++ G++IH +I +L+ + V AL++MYAKCG + ++ +F
Sbjct: 410 ITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKC 469
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
+ R++VSW ++I A+ +H AL+LF +M + +KPD VTF+ +L+AC HAGLV EG
Sbjct: 470 LPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEG 529
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI-VLGTLLSAC 482
YFN M YGI P +EH++CLIDLLGRAG+L EA E ++ P +D + +L TL SAC
Sbjct: 530 CYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSAC 589
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
RL R++ +G +A+ L P +S Y+LLSN+YAS W +V R +K+ GLKK P
Sbjct: 590 RLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPG 649
Query: 543 YSMIEVQGTFEKFTVAEFSH 562
S IE+ F V + SH
Sbjct: 650 CSWIEINQKILPFFVEDNSH 669
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 254/486 (52%), Gaps = 10/486 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ + LL C +K+L+QG +H V+ +G+Q D+ + +++NLY C A+ VFD
Sbjct: 3 TRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFD 62
Query: 62 EMSERNLVS-WSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSL 116
M +S W+ +++G+ + ++ ALE F ++ +L P+ Y + S + AC G+
Sbjct: 63 NMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKY 122
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
V G+ IH +K G VG+SL+ MY K A+ ++ E E ++ +N +I+ +
Sbjct: 123 VLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCY 182
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
++ ++ E F LM R G P+ + + C+ DL +GM +H + +
Sbjct: 183 YQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDS 242
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
F+ + ++ +Y K + A + F + +K +++WN+ I+ D + +FK M N+
Sbjct: 243 FISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNE 302
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
GV+P T +S++ C+ A + GK +H + IR R+ DV + ++L+++Y KCG +
Sbjct: 303 -GVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVEL 361
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ +F + VVSWN +I+ + AL LF +M+ + ++PD++TF +LTAC+
Sbjct: 362 AENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQ 421
Query: 417 AGLVKEGEAYFN-SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
+++GE N +EK + + L+D+ + G + EA K P +D +
Sbjct: 422 LAALEKGEEIHNLIIEKKLDNNEVV--MGALLDMYAKCGAVDEAFSVFKCLP-KRDLVSW 478
Query: 476 GTLLSA 481
++++A
Sbjct: 479 TSMITA 484
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 156/307 (50%), Gaps = 13/307 (4%)
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDL 267
L C S L++G ++H V L+++ F+ ++ LY +L A+ F +E
Sbjct: 10 LRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPCE 69
Query: 268 IS-WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
IS WN +A + Y + L +F+++ + ++PD +T+ S+L AC GL GK IH
Sbjct: 70 ISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMIH 129
Query: 327 AHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGG 386
L++ L D+ VG++LV MYAKC + LFNEM ++V WNT+I+ +
Sbjct: 130 TCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFK 189
Query: 387 SALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG----EAYFNSMEKTYGISPDIEH 442
AL+ F M+ G +P+SVT +++C + G E NS G D
Sbjct: 190 EALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINS-----GFLLDSFI 244
Query: 443 FTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH-- 500
+ L+D+ G+ G L A E ++ P + + +++S L+ D + +L K++++
Sbjct: 245 SSALVDMYGKCGHLEMAIEVFEQMP-KKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEG 303
Query: 501 LQPTTTS 507
++PT T+
Sbjct: 304 VKPTLTT 310
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +S+L CS+ AL++G +H +++ + + +V +L++YAKCG + A VF
Sbjct: 409 AITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFK 468
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
+ +R+LVSW++MI+ + G+ +ALE F++M ++ P+ F + +SAC
Sbjct: 469 CLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACG 521
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/566 (36%), Positives = 331/566 (58%), Gaps = 10/566 (1%)
Query: 17 ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMIS 76
A+++G+ +H V+K G+ + V N ++N+Y+K + A+ VFD M RN VSW++MI+
Sbjct: 208 AVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIA 267
Query: 77 GHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYAS 133
G G L A E F +M L + IFA+ I CA I+ + +Q+H +K G
Sbjct: 268 GFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDF 327
Query: 134 ISFVGNSLISMYMKVGYSSDALLVYGEAFE-PNLVSFNALIAGFVENQQPEKGFEVFKLM 192
+ +L+ Y K DA ++ N+VS+ A+I+G+V+N + ++ +F M
Sbjct: 328 DLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQM 387
Query: 193 LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI 252
R+G+ P+ F+++ L +N +H L VK E++P VG + YSK
Sbjct: 388 RREGVRPNHFTYSTIL----TANAAVSPSQIHALVVKTNYENSPSVGTALSDSYSKIGDA 443
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
EA K F LI+EKD+++W+ ++ + D E + +F +++ + GV P++FTF+S+L A
Sbjct: 444 NEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKE-GVEPNEFTFSSVLNA 502
Query: 313 CAG-LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
CA ASV+ GKQ H+ I+ + + V +ALV MYAK G I + ++F + R++VS
Sbjct: 503 CAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVS 562
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
WN++I+ +A H G +LK+FE+M++ ++ D +TFIG+++AC HAGLV EG+ YF+ M
Sbjct: 563 WNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMV 622
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
K Y I P +EH++C++DL RAG L +A + K P + TLL+ACR+ +V +G
Sbjct: 623 KDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLG 682
Query: 492 ERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGT 551
E A++L LQP ++ YVLLSN+YA+ G W + A RK++ +KKE YS IEV+
Sbjct: 683 ELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNK 742
Query: 552 FEKFTVAEFSHSKIGEINYMLKTLSL 577
F + SH + I L+ LS+
Sbjct: 743 TFSFMAGDLSHPQSDRIYLKLEELSI 768
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 140/482 (29%), Positives = 251/482 (52%), Gaps = 10/482 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+S +L C G +H +K G DV V ++++Y K + +VFDEM
Sbjct: 94 SLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEM 153
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+N+VSW+++++G+ Q G + AL+ FSQM L PN + FA+ + A ++ KG
Sbjct: 154 RVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGV 213
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H +K G S FVGNS+++MY K SDA V+ N VS+N++IAGFV N
Sbjct: 214 QVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNG 273
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ FE+F M +G+ + FA +++C+ ++ LHC +K + + +
Sbjct: 274 LDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKT 333
Query: 241 TIMALYSKFNLIGEAEKAFRLIEE-KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+M YSK + I +A K F ++ ++++SW I+ ++ +++F +M + GV
Sbjct: 334 ALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRRE-GV 392
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
RP+ FT+++IL A A ++ QIHA +++ VG AL + Y+K G + + K
Sbjct: 393 RPNHFTYSTILTANAAVSP----SQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAK 448
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F + +++V+W+ +++ +A A+K+F Q+ G++P+ TF +L AC
Sbjct: 449 IFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTA 508
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
E F+S G S + + L+ + + G + A E K+ + +D + +++
Sbjct: 509 SVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKR-QVDRDLVSWNSMI 567
Query: 480 SA 481
S
Sbjct: 568 SG 569
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 223/434 (51%), Gaps = 19/434 (4%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL--PNE-YIFASAISACAG 112
++++FDE ++ L + ++ + ++ AL F + P + + + C
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
+ + G+Q+H +K G+ VG SL+ MYMK D V+ E N+VS+ +L
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 173 IAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
+AG+ +N E+ ++F M +G+ P+ F+FA L + + KG+ +H + +K L
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA-CSHCADYEKGLSVFK 291
+S FVGN+++ +YSK ++ +A+ F +E ++ +SWN+ IA ++ D E +F
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLE-AFELFY 283
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
M + GV+ FA+++ CA + + KQ+H +I+ + D+ + AL+ Y+KC
Sbjct: 284 RMRLE-GVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKC 342
Query: 352 GLISCSYKLFNEMLH--RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
I ++KLF M+H +NVVSW II+ + + A+ LF QM+ G++P+ T+
Sbjct: 343 SEIDDAFKLFC-MMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYST 401
Query: 410 LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL- 468
+LTA N A V + + ++ Y SP + T L D + G +A E K F L
Sbjct: 402 ILTA-NAA--VSPSQIHALVVKTNYENSPSVG--TALSDSYSKIG---DANEAAKIFELI 453
Query: 469 -GQDPIVLGTLLSA 481
+D + +LS
Sbjct: 454 DEKDIVAWSAMLSG 467
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 70/122 (57%), Gaps = 4/122 (3%)
Query: 4 SISSLLHHCS-KTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+ SS+L+ C+ T +++QG H+ +K G + VS+ ++ +YAK G + A +VF
Sbjct: 495 TFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKR 554
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
+R+LVSW++MISG+ Q G +L+ F +M +L + F ISAC + +G
Sbjct: 555 QVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEG 614
Query: 120 QQ 121
Q+
Sbjct: 615 QR 616
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/578 (35%), Positives = 335/578 (57%), Gaps = 9/578 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+SS+L C K L+ G +H VL+ GI DV + N ++ Y KC K+ L RK+FD M
Sbjct: 245 LSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMV 304
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQ 121
++N+VSW+ +I+G Q H AL+ F +M + P+ + S +++C + +L KG+Q
Sbjct: 305 DKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQ 364
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+HAY++K + FV N LI MY K +DA V+ +LVS+NA+I G+ +
Sbjct: 365 VHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDK 424
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ ++F+ M P F L + + L +H L +K + + F G+
Sbjct: 425 LCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSA 484
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK--EMSNDHGV 299
++ +YSK + +G+A F I++KD++ W + + ++ E+ L ++K +MS +
Sbjct: 485 LIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSR---L 541
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+P++FTFA+++ A + +AS++HG+Q H +I+M + D V N LV+MYAK G I ++K
Sbjct: 542 KPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHK 601
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
F ++ WN++IA +A H AL++FE M G+KP+ VTF+G+L+AC+H GL
Sbjct: 602 AFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGL 661
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
+ G +F+SM + +GI P IEH+ C++ LLGRAGKL EA+E+ +K P+ Q +V +LL
Sbjct: 662 LDLGFDHFDSMSQ-FGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLL 720
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
SACR+ +V +G A+ P + YVLLSN++AS GMW +V R+ + SG+ K
Sbjct: 721 SACRVSGNVELGTYAAEMAISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMDISGVVK 780
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
EP S IEV KF + +H I+ +L L L
Sbjct: 781 EPGCSWIEVNNEIHKFIAKDTAHRDSAPISLVLDNLLL 818
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 233/460 (50%), Gaps = 5/460 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
++S++ C++ L + +H V+K G DV V +++ Y K + AR +FD +
Sbjct: 144 LASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQ 203
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
+ +W+ +I+G+ + G ++L+ F QM H+ P++Y+ +S +SAC ++ L G+Q
Sbjct: 204 VKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQ 263
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
IH Y L+ G + N I Y K ++ + N+VS+ +IAG ++N
Sbjct: 264 IHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSF 323
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
++F M R G PD F L C L KG +H +K ++++ FV N
Sbjct: 324 HRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNG 383
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y+K + + +A K F L+ DL+S+N I S + L +F+EM P
Sbjct: 384 LIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLS-SP 442
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
F S+L A L ++ QIH +I+ ++ D G+AL+++Y+KC + + +F
Sbjct: 443 TLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVF 502
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
E+ +++V W + + + +LKL++ ++ + +KP+ TF ++TA ++ ++
Sbjct: 503 EEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLR 562
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
G+ + N + K G D L+D+ ++G + EA +
Sbjct: 563 HGQQFHNQVIKM-GFDDDPFVANTLVDMYAKSGSIEEAHK 601
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 128/445 (28%), Positives = 222/445 (49%), Gaps = 13/445 (2%)
Query: 24 LHAAVLKMGIQP-DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
+H+ ++ G D+ + N +L+ Y+K + A K+FD MS +NLV+WS+M+S +
Sbjct: 60 IHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHS 119
Query: 83 EHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVG 138
L AL F Q + PNEYI AS + AC L QIH +K GY +V
Sbjct: 120 HCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVC 179
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL 198
SLI Y K DA L++ ++ +IAG+ + + + ++F M +
Sbjct: 180 TSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVC 239
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKA 258
PD++ + L C + L G +HC ++ + + + N + Y K + + K
Sbjct: 240 PDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKL 299
Query: 259 FRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
F + +K+++SW T IA C + + L +F EM+ G PD F S+L +C L +
Sbjct: 300 FDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMAR-MGWNPDAFGCTSVLNSCGSLVA 358
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA 378
++ G+Q+HA+ I++ ++ D V N L++MYAKC ++ + K+FN M ++VS+N +I
Sbjct: 359 LEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEG 418
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFIGLL---TACNHAGLVKEGEAYFNSMEKTYG 435
++ AL LF +M+ + P + F+ LL + H L + + + YG
Sbjct: 419 YSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQ----IHGLIIKYG 474
Query: 436 ISPDIEHFTCLIDLLGRAGKLLEAE 460
+S D + LID+ + ++ +A
Sbjct: 475 VSLDEFAGSALIDVYSKCSRVGDAR 499
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++++ S +L+ G H V+KMG D V+N ++++YAK G + A K F
Sbjct: 547 TFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFIST 606
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
+ ++ W++MI+ + Q GE AL+ F M L PN F +SAC+
Sbjct: 607 NWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACS 657
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/571 (33%), Positives = 325/571 (56%), Gaps = 4/571 (0%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C L++G +H ++ +V V+N+YAKC ++ A K+FD M ER+
Sbjct: 153 LLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERD 212
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
LVSW+ +I+G Q G ALE +M P+ + + A A + L+ G+ IH
Sbjct: 213 LVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHG 272
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
Y+++ G+A + + +L MY K G A L++ + +VS+N+++ G+V+N +PEK
Sbjct: 273 YAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEK 332
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
VF+ ML +G+ P + L C+ DL +G +H + L S+ V N++++
Sbjct: 333 AIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLIS 392
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+YSK + A F + + +SWN I + + L+ F EM + G++PD F
Sbjct: 393 MYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKS-LGMKPDSF 451
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T S++ A A L+ +H K IH +IR L++++ V ALV+MY+KCG I + KLF+ +
Sbjct: 452 TMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMI 511
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
R+V++WN +I + H LG +AL LF++MK ++P+ +T++ +++AC+H+GLV EG
Sbjct: 512 SDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGL 571
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRL 484
+F SM++ YG+ P ++H+ ++DLLGRAG++ EA ++ + P+ V G AC++
Sbjct: 572 RHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKI 631
Query: 485 RRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYS 544
+++ +GE+ AK+LF L P +VLL+N+YAS W VA RK ++ GLKK P S
Sbjct: 632 HKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCS 691
Query: 545 MIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
++E++ F +H + I L+ L
Sbjct: 692 VVELRNEVHSFYSGSTTHPQSKRIYAFLEEL 722
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 218/452 (48%), Gaps = 8/452 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C+ K L Q I L V+K G+ + + +++L++K G + A +VF+ + ++
Sbjct: 55 LLELCTSMKELHQIIPL---VIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKL 111
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
+ M+ G+ + AL F +M + P Y F + C L +G++IH
Sbjct: 112 DALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHG 171
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ +A+ F +++MY K DA ++ E +LVS+N +IAGF +N +K
Sbjct: 172 QLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKK 231
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
E+ M +G PD + L + L G +H ++ + +
Sbjct: 232 ALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALAD 291
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+YSK + A F +++K ++SWN+ + + EK ++VF++M + G+ P
Sbjct: 292 MYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKML-EEGIDPTGV 350
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T L ACA L ++ GK +H + ++ L D+ V N+L++MY+KC + + +FN +
Sbjct: 351 TIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNL 410
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
R VSWN +I +A + AL F +MK+ G+KPDS T + ++ A + + +
Sbjct: 411 NGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAK 470
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+ + + + +I T L+D+ + G +
Sbjct: 471 -WIHGLIIRSCLDKNIFVTTALVDMYSKCGAI 501
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 112/221 (50%), Gaps = 3/221 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I LH C+ L++G +H V ++ + D+ V N ++++Y+KC ++ +A +F+ +
Sbjct: 351 TIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNL 410
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
+ R VSW+AMI G+ Q G AL FS+M L P+ + S I A A + +
Sbjct: 411 NGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAK 470
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IH ++ FV +L+ MY K G A ++ + +++++NA+I G+ +
Sbjct: 471 WIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHG 530
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
++F M + + P+ ++ + CS S + +G+
Sbjct: 531 LGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGL 571
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/578 (36%), Positives = 328/578 (56%), Gaps = 8/578 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +SLL C+ + L+ G H+ ++K + ++ V N ++++YAKCG + AR++F+ M
Sbjct: 430 TFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHM 489
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+R+ VSW+ +I G+ Q A + F +M+ ++ + AS + AC + L +G+
Sbjct: 490 CDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGK 549
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H S+K G + G+SLI MY K G DA V+ E ++VS NALIAG+ +N
Sbjct: 550 QVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNN 609
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN-PFVG 239
E+ +F+ ML +G+ P +FA +E C L G H +K S ++G
Sbjct: 610 L-EEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLG 668
Query: 240 NTIMALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
+++ LY + EA F L K ++ W ++ S YE+ L +KEM +D G
Sbjct: 669 ISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHD-G 727
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
PD TF ++L C+ L+S++ G+ IH+ + + + D N L++MYAKCG + S
Sbjct: 728 ALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSS 787
Query: 359 KLFNEMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++F+EM R NVVSWN++I +A + ALK+F+ M+ + I PD +TF+G+LTAC+HA
Sbjct: 788 QVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHA 847
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
G V +G F M YGI ++H C++DLLGR G L EA+++ + L D + +
Sbjct: 848 GKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSS 907
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL ACR+ D + GE A++L L+P +S YVLLSN+YAS G W + RK ++D G+
Sbjct: 908 LLGACRIHGDDMRGEIAAERLIELEPQNSSAYVLLSNIYASQGRWEEANALRKAMRDRGV 967
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KK P YS I+V F + SHS IG+I L+ L
Sbjct: 968 KKVPGYSWIDVGQRRHIFAAGDQSHSDIGKIEMFLEDL 1005
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 140/423 (33%), Positives = 226/423 (53%), Gaps = 8/423 (1%)
Query: 32 GIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFF 91
G +PD + V+N Y GK+ AR +F EM ++V+W+ MISGH + G ++A+E+F
Sbjct: 256 GHRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYF 315
Query: 92 SQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKV 148
M + S +SA + +L G +HA ++K G AS +VG+SL+SMY K
Sbjct: 316 LNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKC 375
Query: 149 GYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGL 208
A V+ E N V +NA+I G+ N + K E+F M G D F+F L
Sbjct: 376 EKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLL 435
Query: 209 EICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLI 268
C+VS+DL G H + +K KL N FVGN ++ +Y+K + +A + F + ++D +
Sbjct: 436 STCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNV 495
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
SWNT I + + +F M N G+ D AS L AC + + GKQ+H
Sbjct: 496 SWNTIIGGYVQDENESEAFDLFMRM-NSCGIVSDGACLASTLKACTNVHGLYQGKQVHCL 554
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
++ L++ + G++L++MY+KCG+I + K+F+ M +VVS N +IA ++ + L A
Sbjct: 555 SVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNL-EEA 613
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID 448
+ LF++M G+ P +TF ++ AC+ + G + + K +G S + E+ I
Sbjct: 614 VVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIK-WGFSSEGEYLG--IS 670
Query: 449 LLG 451
LLG
Sbjct: 671 LLG 673
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 137/460 (29%), Positives = 247/460 (53%), Gaps = 12/460 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+L L G+ +HA +K+G+ ++ V + ++++Y+KC KM A KVF+ +
Sbjct: 329 TLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEAL 388
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
ERN V W+AMI G+ GE +E F M +++ F S +S CA L G
Sbjct: 389 EERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGS 448
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q H+ +K FVGN+L+ MY K G DA ++ + + VS+N +I G+V+++
Sbjct: 449 QFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDE 508
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ F++F M G++ D A L+ C+ + L +G +HCL+VKC L+ G+
Sbjct: 509 NESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGS 568
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +YSK +I +A K F + E ++S N IA S + E+ + +F+EM GV
Sbjct: 569 SLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLT-KGVN 626
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG-VGNALVNMYAKCGLISCSYK 359
P + TFA+I+ AC S+ G Q H +I+ + + +G +L+ +Y ++ +
Sbjct: 627 PSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACA 686
Query: 360 LFNEMLH-RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
LF+E+ +++V W +++ H+ + ALK +++M+ G PD TF+ +L C+
Sbjct: 687 LFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLS 746
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFT--CLIDLLGRAGKL 456
++EG A + + + ++ D++ T LID+ + G +
Sbjct: 747 SLREGRAIHSLI---FHLAHDLDELTSNTLIDMYAKCGDM 783
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 232/464 (50%), Gaps = 34/464 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S +L ++ ++ G +H +++KMG++ + ++++YAKC ++ A++VFD +
Sbjct: 162 TFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGI 221
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
+ N V W+ + SG+ +AG LP E + + ++G+
Sbjct: 222 VDPNTVCWTCLFSGYVKAG--------------LPEEAVI---------VFERMRGEGHR 258
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
L F ++I+ Y+ +G DA L++GE P++V++N +I+G +
Sbjct: 259 PDHLAF---------VTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEI 309
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
E F M + + R + L + +L G+++H +K L SN +VG++++
Sbjct: 310 VAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLV 369
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
++YSK + A K F +EE++ + WN I +H + K + +F +M + G DD
Sbjct: 370 SMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSS-GYNIDD 428
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
FTF S+L+ CA ++ G Q H+ +I+ +L +++ VGNALV+MYAKCG + + ++F
Sbjct: 429 FTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEH 488
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M R+ VSWNTII + A LF +M + GI D L AC + + +G
Sbjct: 489 MCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQG 548
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+ + + G+ + + LID+ + G + +A + P
Sbjct: 549 KQ-VHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMP 591
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 214/448 (47%), Gaps = 41/448 (9%)
Query: 17 ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMIS 76
AL+ G ++H+ L +GI + + N +++LYAKC ++ A K F+ + E+++ +W++M+S
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLS 133
Query: 77 GHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYAS 133
+ G+ L F + + PN++ F+ +S A ++ G+QIH +K G
Sbjct: 134 MYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLER 193
Query: 134 ISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLML 193
S+ G +L+ MY K DA V+ +PN V + L +G+V+ PE+ VF+ M
Sbjct: 194 NSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMR 253
Query: 194 RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
+G PD +F T++ Y +
Sbjct: 254 GEGHRPDHLAFV-----------------------------------TVINTYISLGKLK 278
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
+A F + D+++WN I+ + F M V+ T S+L+A
Sbjct: 279 DARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKS-SVKSTRSTLGSVLSAI 337
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
+A++ G +HA I++ L ++ VG++LV+MY+KC + + K+F + RN V WN
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWN 397
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT 433
+I +A++ ++LF MK++G D TF LL+ C + ++ G + F+S+
Sbjct: 398 AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMG-SQFHSIIIK 456
Query: 434 YGISPDIEHFTCLIDLLGRAGKLLEAEE 461
++ ++ L+D+ + G L +A +
Sbjct: 457 KKLTKNLFVGNALVDMYAKCGALEDARQ 484
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 140/268 (52%), Gaps = 10/268 (3%)
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
LR G +H ++ ++S +GN I+ LY+K + AEK F +E KD+ +WN+ ++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLE-KDVTAWNSMLSM 134
Query: 277 CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
S K L F + ++ + P+ FTF+ +L+ A +V+ G+QIH +I+M L +
Sbjct: 135 YSSIGQPGKVLRSFVSLF-ENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLER 193
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
+ G ALV+MYAKC + + ++F+ ++ N V W + + + L A+ +FE+M+
Sbjct: 194 NSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMR 253
Query: 397 ATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
G +PD + F+ ++ G +K+ F M SPD+ + +I G+ G
Sbjct: 254 GEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMP-----SPDVVAWNVMISGHGKRGCE 308
Query: 457 LEAEEY---TKKFPLGQDPIVLGTLLSA 481
+ A EY +K + LG++LSA
Sbjct: 309 IVAIEYFLNMRKSSVKSTRSTLGSVLSA 336
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/547 (36%), Positives = 320/547 (58%), Gaps = 4/547 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++++L C + G +H +K+G D+ VS + +Y KCG + +A FD++
Sbjct: 148 TLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQI 207
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+++V+W+ MI+G+ Q A+E F QM L PN+ F + A + G+
Sbjct: 208 ENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGR 267
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
HA LK G + FV +L+ MY K D +GE + NLVSFNALI G+
Sbjct: 268 CFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMG 327
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ E+ V+ + +G+ PD F+F G CSVS+ + +G +H +VK L+S+ VGN
Sbjct: 328 KYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGN 387
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+I+ YSK A +AF I + + W I+ + + EK L F +M +
Sbjct: 388 SIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKALMQFCKM-RKFIDK 446
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D+F+ +S++ A + A+V+ G+ +HAH+++ L+ + VG+A+++MY+KCG++ + K+
Sbjct: 447 TDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKV 506
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+ M +NVVSWN++I +A + AL LF++M ++GI P +VTF+G+L AC+HAGLV
Sbjct: 507 FSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVGILFACSHAGLV 566
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+EG ++N M YGI P +EH TC++DLLGRAG L EAE + ++P + G+LLS
Sbjct: 567 EEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYLEEAEAFLLSSSFSKEPGIWGSLLS 626
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC + ++ +G R A+ L+P +S Y LSN+YAS +W +V+ R ++KD G++KE
Sbjct: 627 ACGVHKNSDVGSRAAQHCLFLEPHYSSSYTALSNIYASKELWSEVSRIRDLMKDMGVEKE 686
Query: 541 PSYSMIE 547
P S IE
Sbjct: 687 PGCSWIE 693
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/473 (28%), Positives = 247/473 (52%), Gaps = 9/473 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + S+ + C+++ SLH +LK G + VS+ ++++Y+K ++ AR +FD
Sbjct: 41 AITYSATISACAQSTRPSLATSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFD 100
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM-------HLLPNEYIFASAISACAGIQ 114
+M ER+ VSW++MI+G+ Q G + A F M LL +++ A+ + AC G+
Sbjct: 101 DMPERDDVSWNSMIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLG 160
Query: 115 SLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIA 174
G+ +H Y++K G+ S FV S + MY K G A L + + ++V++N +I
Sbjct: 161 CSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMIT 220
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
G+ +N E+ E+F M +G P+ +F L+ + +D G H +K
Sbjct: 221 GYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSM 280
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
+ FV ++ +YSKF I + E+AF + +++L+S+N I S YE+ L V+ ++
Sbjct: 281 DVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQ 340
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
++ G+ PD FTF + ++C+ ++V G Q+H H ++ L+ DV VGN++VN Y+KCG
Sbjct: 341 SE-GMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFT 399
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ + F + N V W II+ A + G AL F +M+ K D + ++ A
Sbjct: 400 DSALEAFESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAV 459
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+ V++G + K+ G+ I + +ID+ + G + +A++ P
Sbjct: 460 SSWAAVEQGRHLHAHVMKS-GLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMP 511
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 211/400 (52%), Gaps = 11/400 (2%)
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
M E N+V W++ I+ + + G AL F QM + PN +++ ISACA
Sbjct: 1 MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+H LK G+++ FV + LISMY K +A ++ + E + VS+N++IAG+ +
Sbjct: 61 TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQR 120
Query: 180 QQPEKGFEVFKLMLRQ----GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
E+ +F M+ LL F+ A L+ C R G +H VK +S+
Sbjct: 121 GLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSD 180
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
FV + + +Y K ++ A AF IE KD+++WNT I + E+ + +F +M
Sbjct: 181 LFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMEL 240
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
+ G +P+D TF +L A ++ G+ HA ++++ + DV V ALV+MY+K I
Sbjct: 241 E-GFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIE 299
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ F EM RN+VS+N +I ++ AL+++ Q+++ G++PDS TF+GL ++C+
Sbjct: 300 DVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCS 359
Query: 416 HAGLVKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
+ V EG + + +S++ +G+ D+ +++ + G
Sbjct: 360 VSSTVAEGAQVHVHSVK--FGLDSDVSVGNSIVNFYSKCG 397
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 154/308 (50%), Gaps = 7/308 (2%)
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
E N+V + + I ++ F MLR G+ P+ +++ + C+ S
Sbjct: 2 LETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLAT 61
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
LHCL +K + FV + ++++YSK + I EA F + E+D +SWN+ IA S
Sbjct: 62 SLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRG 121
Query: 282 DYEKGLSVFKEMSN---DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
E+ +F M N + + DFT A++L AC GL + GK +H + +++ + D+
Sbjct: 122 LNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDL 181
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
V + V MY KCG++ + F+++ ++++V+WNT+I +A + A++LF QM+
Sbjct: 182 FVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELE 241
Query: 399 GIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLE 458
G KP+ TF +L A G + + K G S D+ T L+D+ K +
Sbjct: 242 GFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLK-LGCSMDVFVATALVDMY---SKFYD 297
Query: 459 AEEYTKKF 466
E+ + F
Sbjct: 298 IEDVERAF 305
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/568 (35%), Positives = 330/568 (58%), Gaps = 4/568 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+ C+ A + G LH LK D I+ L++YAKC +M A KVF+ +
Sbjct: 241 TYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTL 300
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
S++A+I G+ + + L AL+ F + +L +E + A++AC+ I+ ++G
Sbjct: 301 PNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGI 360
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H ++K G V N+++ MY K G +A L++ E + VS+NA+IA +N+
Sbjct: 361 QLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNE 420
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ K +F MLR + PD F++ ++ C+ L G +H +K + + FVG+
Sbjct: 421 EIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGS 480
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y K ++ EAEK +EEK +SWN+ I+ S E F +M + G+
Sbjct: 481 ALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQML-EMGII 539
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD++T+A++L CA +A+++ GKQIHA +++++L+ DV + + LV+MY+KCG + S +
Sbjct: 540 PDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLM 599
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F + R+ V+W+ +I A+A H LG A+ LFE+M+ +KP+ FI +L AC H G V
Sbjct: 600 FEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYV 659
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+G YF M YG+ P +EH++C++DLLGR+G++ EA + + P D ++ TLLS
Sbjct: 660 DKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLS 719
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
C+++ +V + E+ L L P +S YVLL+N+YA GMWG+VA R ++K+ LKKE
Sbjct: 720 NCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKE 779
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
P S IEV+ F V + +H + EI
Sbjct: 780 PGCSWIEVRDEVHTFLVGDKAHPRSEEI 807
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 153/481 (31%), Positives = 257/481 (53%), Gaps = 6/481 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + +L CS + G+ +H ++MG + DV+ + ++++Y+KC K+ A +VF EM
Sbjct: 140 TFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREM 199
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
ERNLV WSA+I+G+ Q + L+ F M + ++ +AS +CAG+ + G
Sbjct: 200 PERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGT 259
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H ++LK +A S +G + + MY K DA V+ P S+NA+I G+
Sbjct: 260 QLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQD 319
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
Q K ++F+ + R L D S +G L CSV +G+ LH L VKC L N V N
Sbjct: 320 QGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVAN 379
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
TI+ +Y K + EA F +E +D +SWN IAA + K LS+F M +
Sbjct: 380 TILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRS-TME 438
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PDDFT+ S++ ACAG ++ +G +IH +I+ + D VG+ALV+MY KCG++ + K+
Sbjct: 439 PDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKI 498
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
+ + VSWN+II+ ++ + +A + F QM GI PD+ T+ +L C + +
Sbjct: 499 HARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATI 558
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+ G+ + K + D+ + L+D+ + G + ++ +K P +D + ++
Sbjct: 559 ELGKQIHAQILKL-QLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAP-KRDYVTWSAMIC 616
Query: 481 A 481
A
Sbjct: 617 A 617
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/492 (28%), Positives = 239/492 (48%), Gaps = 36/492 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S +L CS KAL G +H ++ G P + V+N +L Y K KM A KVFD M
Sbjct: 8 TFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRM 67
Query: 64 SERNLVSWSAMISGHHQAGEHLLA-------------------------------LEFFS 92
+R+++SW+ +I G+ G A +E F
Sbjct: 68 PQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127
Query: 93 QMHLL--PNEY-IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
+M L P++Y FA + AC+GI+ G Q+H +++ G+ + G++L+ MY K
Sbjct: 128 RMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCK 187
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
DA V+ E E NLV ++A+IAG+V+N + +G ++FK ML+ G+ + ++A
Sbjct: 188 KLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFR 247
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
C+ + + G LH +K + +G + +Y+K + +A K F + S
Sbjct: 248 SCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQS 307
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
+N I + K L +F+ + ++ + D+ + + L AC+ + G Q+H
Sbjct: 308 YNAIIVGYARQDQGLKALDIFQSLQRNN-LGFDEISLSGALTACSVIKRHLEGIQLHGLA 366
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
++ L ++ V N +++MY KCG + + +F EM R+ VSWN IIAAH + L
Sbjct: 367 VKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTL 426
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
LF M + ++PD T+ ++ AC + G + K+ G+ D + L+D+
Sbjct: 427 SLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKS-GMGLDWFVGSALVDM 485
Query: 450 LGRAGKLLEAEE 461
G+ G L+EAE+
Sbjct: 486 YGKCGMLMEAEK 497
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 113/249 (45%), Gaps = 32/249 (12%)
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+ +F+ L+ CS L G +H + +V N ++ Y K + + A K F
Sbjct: 6 KLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFD 65
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND--------------HGVR------ 300
+ ++D+ISWNT I + + S+F M +GV
Sbjct: 66 RMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEI 125
Query: 301 ---------PDDF-TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
P D+ TFA IL AC+G+ G Q+H I+M DV G+ALV+MY+K
Sbjct: 126 FVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGL 410
C + ++++F EM RN+V W+ +IA + + LKLF+ M G+ T+ +
Sbjct: 186 CKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245
Query: 411 LTACNHAGL 419
+C AGL
Sbjct: 246 FRSC--AGL 252
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 214/643 (33%), Positives = 339/643 (52%), Gaps = 73/643 (11%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+ LL C K+K++ + +HA ++K ++ + N ++++Y KCG + ARKVFD M +
Sbjct: 23 AKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQ 82
Query: 66 RNL-------------------------------VSWSAMISGHHQAGEHLLALEFFSQM 94
RN SW+AM+SG Q AL F M
Sbjct: 83 RNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDM 142
Query: 95 H---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
H + NEY F SA+SACAG+ L G QIH K Y+ ++G++L+ MY K
Sbjct: 143 HSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVV 202
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
+ A + + N+VS+N+LI + +N K EVF M+ G+ PD + A C
Sbjct: 203 ASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASAC 262
Query: 212 SVSNDLRKGMILHCLTVKCKLESNPFV-GNTIMALYSKFNLIGEAE-------------- 256
+ + +R+G+ +H +K N V GN ++ +Y+K + EA
Sbjct: 263 ASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSE 322
Query: 257 -------------KAFRLI----EEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
KA RL+ E++++SWN IA + + E+ + +F + + +
Sbjct: 323 TSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRE-SI 381
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRL------NQDVGVGNALVNMYAKCGL 353
P +TF ++L ACA LA ++ G+Q H H+++ + D+ VGN+L++MY KCGL
Sbjct: 382 WPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGL 441
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ +F ML R+ VSWN +I +A + G AL++F +M +G +PD VT IG+L+A
Sbjct: 442 VEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSA 501
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C+HAGLV+EG YF SM +G+ P +H+TC++DLLGRAG L EA + P+ D +
Sbjct: 502 CSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAV 561
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
V G+LL+AC++ ++ +G+ +A++L + P + PYVLLSN+YA G W DV RK ++
Sbjct: 562 VWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMR 621
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
G+ K+P S I +Q F V + H +I +LK L+
Sbjct: 622 QMGVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLILKILT 664
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 205/428 (47%), Gaps = 47/428 (10%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S S L C+ L G+ +H + K DV + + ++++Y+KC + A++ FD+M
Sbjct: 153 SFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDM 212
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
RN+VSW+++I+ + Q G ALE F +M + P+E AS SACA + ++ +G
Sbjct: 213 DVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGL 272
Query: 121 QIHAYSLKFG-YASISFVGNSLISMYMKVGYSSDALLVYGE------------------- 160
QIHA +K Y + +GN+L+ MY K ++A LV+
Sbjct: 273 QIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKA 332
Query: 161 ------------AFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGL 208
E N+VS+NALIAG+ +N + E+ +F L+ R+ + P ++F L
Sbjct: 333 SSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLL 392
Query: 209 EICSVSNDLRKG------MILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLI 262
C+ DL+ G ++ H K +S+ FVGN+++ +Y K L+ + F +
Sbjct: 393 NACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERM 452
Query: 263 EEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG 322
E+D +SWN I + + L +F+EM G RPD T +L+AC+ V+ G
Sbjct: 453 LERDNVSWNAMIVGYAQNGYGTEALEIFREMLVS-GERPDHVTMIGVLSACSHAGLVEEG 511
Query: 323 K-QIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAA-- 378
+ + I L +V++ + G + + L M + + V W +++AA
Sbjct: 512 RCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACK 571
Query: 379 -HANHRLG 385
H N LG
Sbjct: 572 VHGNITLG 579
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 198/420 (47%), Gaps = 69/420 (16%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY---- 158
FA + C +S+ + + +HA +K ++S F+ N L+ +Y K G+ DA V+
Sbjct: 22 FAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQ 81
Query: 159 --------------------GEAF-------EPNLVSFNALIAGFVENQQPEKGFEVFKL 191
EA E + S+NA+++GF + + E+
Sbjct: 82 QRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVD 141
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
M + + + +SF L C+ DL G+ +H L K + + ++G+ ++ +YSK +
Sbjct: 142 MHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRV 201
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ A++AF ++ ++++SWN+ I K L VF M N G+ PD+ T AS+ +
Sbjct: 202 VASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMN-CGIEPDEITLASVAS 260
Query: 312 ACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKCGLIS--------------- 355
ACA L++++ G QIHA +++ + D+ +GNALV+MYAKC ++
Sbjct: 261 ACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVV 320
Query: 356 ----------------CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG 399
+ +F+ M+ RNVVSWN +IA + + A++LF +K
Sbjct: 321 SETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRES 380
Query: 400 IKPDSVTFIGLLTACNHAGLVKEG-EAYFNSMEKTY----GISPDIEHFTCLIDLLGRAG 454
I P TF LL AC + +K G +A+ + ++ + G DI LID+ + G
Sbjct: 381 IWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCG 440
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 147/299 (49%), Gaps = 30/299 (10%)
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
D FA L+ C S + + ++H +K + S F+ N ++ +Y K + +A K F
Sbjct: 18 DSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVF 77
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN-------------------DHGVR 300
+++++ SWN + A + ++ L++FK M + +R
Sbjct: 78 DHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALR 137
Query: 301 -----------PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
++++F S L+ACAGL + G QIH + + R + DV +G+ALV+MY+
Sbjct: 138 FVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYS 197
Query: 350 KCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
KC +++ + + F++M RN+VSWN++I + + G AL++F +M GI+PD +T
Sbjct: 198 KCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLAS 257
Query: 410 LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
+ +AC ++EG + K D+ L+D+ + ++ EA + PL
Sbjct: 258 VASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL 316
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/569 (34%), Positives = 328/569 (57%), Gaps = 9/569 (1%)
Query: 15 TKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAM 74
T L+ G +H +K G+ DV V+N ++N+Y+K G AR+VF++M +L+SW++M
Sbjct: 917 TDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSM 976
Query: 75 ISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAG-IQSLVKGQQIHAYSLKFG 130
IS Q+ ++ F + L P+ + AS + AC+ I L +QIH ++LK G
Sbjct: 977 ISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTG 1036
Query: 131 YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFK 190
+ SFV +LI +Y K G +A ++ + +L +NA++ G++ +K E+F
Sbjct: 1037 NIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFS 1096
Query: 191 LMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN 250
L+ + G D+ + A + C L +G +H +K +S+ V + I+ +Y K
Sbjct: 1097 LIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCG 1156
Query: 251 LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
+ A F I D ++W + I+ C + ++ L ++ M V PD++TFA+++
Sbjct: 1157 DMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSR-VMPDEYTFATLI 1215
Query: 311 AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVV 370
A + + +++ G+Q+HA++I++ D VG +LV+MYAKCG I +Y+LF +M RN+
Sbjct: 1216 KASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIA 1275
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSM 430
WN ++ A H A+ LF+ MK+ GI+PD V+FIG+L+AC+HAGL E Y +SM
Sbjct: 1276 LWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSM 1335
Query: 431 EKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVI 490
YGI P+IEH++CL+D LGRAG + EA++ + P + LL ACR++ DV
Sbjct: 1336 PNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVET 1395
Query: 491 GERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQG 550
G+R+A +LF L+P ++ YVLLSN+YA+ W DV ARKM+K +KK+P +S I+V+
Sbjct: 1396 GKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKN 1455
Query: 551 TFEKFTVAEFSHSK----IGEINYMLKTL 575
F V + SH + ++ M+KT+
Sbjct: 1456 MLHLFVVDDRSHPQADIIYDKVEEMMKTI 1484
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 230/470 (48%), Gaps = 52/470 (11%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL T L G HA ++ G D +SN++L +Y+KCG + AR+VFD ER+
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686
Query: 68 LVSWSAMI----------SGHHQAGEHLL-----ALEFFSQMHLLPNEYIFASAISACAG 112
LV+W+A++ G+ Q G HL +L ++M L P + C
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAP-------VLKLCLN 739
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
L + +H Y++K G FV +L+++Y K G DA L++ E ++V +N +
Sbjct: 740 SGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMM 799
Query: 173 IAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
+ G+V+ ++ F++F R GL PD FS +IL+ ++ +
Sbjct: 800 LKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQ---------------LILNGVS-EVNW 843
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
+ ++ + + A +K +L + D+ WN ++ C D + F
Sbjct: 844 DEGKWLADQVQAYAAKLSLSDD---------NPDVFCWNKKLSECLWAGDNWGAIECFVN 894
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
M N + D T +LAA AG ++ GKQ+H ++ L+ DV V N+LVNMY+K G
Sbjct: 895 M-NGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMG 953
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
+ ++FN+M H +++SWN++I++ A L ++ LF + G+KPD T +L
Sbjct: 954 CAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLR 1013
Query: 413 ACNH--AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
AC+ GL + + +++ KT I+ D T LID+ ++GK+ EAE
Sbjct: 1014 ACSSLIDGLNISRQIHVHAL-KTGNIA-DSFVATTLIDVYSKSGKMEEAE 1061
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/486 (25%), Positives = 228/486 (46%), Gaps = 38/486 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++ +L C + L +H +K+G++ DV VS ++N+Y+KCG+M AR +FD M
Sbjct: 729 TLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWM 788
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEY---IFASAISACAGIQSLV 117
ER++V W+ M+ G+ Q G A + FS+ H L P+E+ + + +S +
Sbjct: 789 RERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKW 848
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
Q+ AY+ K+ S D P++ +N ++ +
Sbjct: 849 LADQVQAYA-------------------AKLSLSDD---------NPDVFCWNKKLSECL 880
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
E F M + D + L + ++DL G +H + VK L+S+
Sbjct: 881 WAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVS 940
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N+++ +YSK A + F ++ DLISWN+ I++C+ + E+ +++F ++ ++
Sbjct: 941 VANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHE- 999
Query: 298 GVRPDDFTFASILAACAGLAS-VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
G++PD FT AS+L AC+ L + +QIH H ++ D V L+++Y+K G +
Sbjct: 1000 GLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEE 1059
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ LF ++ WN ++ + G AL+LF + +G K D +T AC
Sbjct: 1060 AEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGC 1119
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
L+ +G+ K G D+ + ++D+ + G ++ A + D +
Sbjct: 1120 LVLLDQGKQIHAHAIKA-GFDSDLHVNSGILDMYIKCGDMVNA-GIVFNYISAPDDVAWT 1177
Query: 477 TLLSAC 482
+++S C
Sbjct: 1178 SMISGC 1183
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++L+ S AL+QG LHA V+K+ D V ++++YAKCG + A ++F +M
Sbjct: 1210 TFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKM 1269
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISAC--AGIQS 115
+ RN+ W+AM+ G Q G A+ F M + P+ F +SAC AG+ S
Sbjct: 1270 NVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTS 1326
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/575 (33%), Positives = 333/575 (57%), Gaps = 4/575 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + LL C L+ G +H ++K G D+ + N+YAKC ++ ARKVFD M
Sbjct: 137 NFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRM 196
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
ER+LVSW+ +++G+ Q G +ALE + M +L P+ S + A + ++ + G+
Sbjct: 197 PERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGK 256
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+IH Y+++ G+ S+ + +L+ MY K G A L++ E N+VS+N++I +V+N+
Sbjct: 257 EIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNE 316
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
P++ +F+ ML +G+ P S G L C+ DL +G +H L+V+ +L+ N V N
Sbjct: 317 NPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVN 376
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++++Y K + A F ++ + ++SWN I + + L+ F +M V+
Sbjct: 377 SLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQA-RTVK 435
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD FT+ S++ A A L+ H K IH ++R L+++V V ALV+MYAKCG I + +
Sbjct: 436 PDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLI 495
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+ M R+V +WN +I + H +G +AL+LFE+M+ I+P+ VTF+ +++AC+H+GLV
Sbjct: 496 FDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLV 555
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+ G F+ M++ Y I P ++H+ ++DLLGRAG+L EA ++ + P+ V G +L
Sbjct: 556 EAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLG 615
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC++ ++V E++A++LF L P +VLL+N+Y + MW V R + GL+K
Sbjct: 616 ACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKT 675
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P SM+E++ F +H +I L+ L
Sbjct: 676 PGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKL 710
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 227/462 (49%), Gaps = 20/462 (4%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL CS K L+ + L + K G+ + + +++L+ + G + A +VF+ + ++
Sbjct: 43 LLERCSSLKELRHILPL---IFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKL 99
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
V + M+ G + + AL+FF +M + P Y F + C L G++IH
Sbjct: 100 NVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+K G++ F L +MY K +A V+ E +LVS+N ++AG+ +N
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
E+ LM + L P + L S +R G +H ++ +S + ++
Sbjct: 220 ALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVD 279
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y+K + A F + E++++SWN+ I A + ++ + +F++M D GV+P D
Sbjct: 280 MYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKML-DEGVKPTDV 338
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
+ L ACA L ++ G+ IH + + L+++V V N+L++MY KC + + +F ++
Sbjct: 339 SVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKL 398
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA------CNHAG 418
R +VSWN +I A + AL F QM+A +KPD+ T++ ++TA +HA
Sbjct: 399 QSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAK 458
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
+ G N ++K ++ T L+D+ + G ++ A
Sbjct: 459 WI-HGVVMRNCLDKNVFVT------TALVDMYAKCGAIMIAR 493
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/555 (36%), Positives = 327/555 (58%), Gaps = 6/555 (1%)
Query: 14 KTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSA 73
+ +L G +H LK+G+ + VSN ++N+Y K K+ LAR VF+ MSER+L+SW++
Sbjct: 334 RLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNS 393
Query: 74 MISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGI-QSLVKGQQIHAYSLKF 129
+I+G Q+ + A+ F Q+ L P+ Y S + A + + + L +QIH +++K
Sbjct: 394 VIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKT 453
Query: 130 GYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVF 189
+ SFV +LI Y + +A +++G +LV++NA+++G+ ++ K E+F
Sbjct: 454 NNVADSFVSTALIDAYSRNRCMKEAEVLFGRN-NFDLVAWNAMMSGYTQSHDGHKTLELF 512
Query: 190 KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF 249
LM +QG D F+ A L+ C + +G +H +K + + +V + I+ +Y K
Sbjct: 513 ALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKC 572
Query: 250 NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
+ A+ AF I D ++W T I+ C + E+ L VF +M GV PD+FT A++
Sbjct: 573 GDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRL-MGVLPDEFTIATL 631
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
A + L +++ G+QIHA+ +++ D VG +LV+MYAKCG I +Y LF + N+
Sbjct: 632 AKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNI 691
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNS 429
+WN ++ A H G AL+LF+QM++ GIKPD VTFIG+L+AC+H+GLV E Y S
Sbjct: 692 TAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRS 751
Query: 430 MEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVV 489
M + YGI P+IEH++CL D LGRAG + EAE + + TLL+ACR++ D
Sbjct: 752 MHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTE 811
Query: 490 IGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQ 549
G+R+A +L L+P +S YVLLSN+YA+ W ++ AR M+K +KK+P +S IEV+
Sbjct: 812 TGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVK 871
Query: 550 GTFEKFTVAEFSHSK 564
F V + S+ +
Sbjct: 872 NKIHLFVVDDRSNPQ 886
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 223/449 (49%), Gaps = 12/449 (2%)
Query: 19 QQGISLHAAVLKMGIQPDVI---VSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMI 75
++ I L +A G+ P+ I + + + ++ G++ D + ++S + ++
Sbjct: 235 EEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFENGNDASAVSEIISRNKIL 294
Query: 76 SGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYA 132
SG+ AG++ L+ F M L ++ F ++ + SL GQQ+H +LK G
Sbjct: 295 SGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLD 354
Query: 133 SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM 192
+ V NSLI+MY K+ A V+ E +L+S+N++IAG ++ + +F +
Sbjct: 355 LMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQL 414
Query: 193 LRQGLLPDRFSFAGGLEIC-SVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
LR GL PD ++ L+ S+ L +H +K ++ FV ++ YS+
Sbjct: 415 LRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRC 474
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ EAE F DL++WN ++ + D K L +F M + G R DDFT A++L
Sbjct: 475 MKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALM-HKQGERSDDFTLATVLK 532
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
C L ++ GKQ+HA+ I+ + D+ V + +++MY KCG +S + F+ + + V+
Sbjct: 533 TCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVA 592
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG-EAYFNSM 430
W T+I+ + AL +F QM+ G+ PD T L A + +++G + + N++
Sbjct: 593 WTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANAL 652
Query: 431 EKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+ P + T L+D+ + G + +A
Sbjct: 653 KLNCTSDPFVG--TSLVDMYAKCGSIDDA 679
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/456 (25%), Positives = 212/456 (46%), Gaps = 45/456 (9%)
Query: 15 TKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAM 74
T L G HA +L + P+ + N+++++Y+KCG + AR+VFD+M ER+LVSW+++
Sbjct: 59 TSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSI 118
Query: 75 ISGHHQAGEHLL--ALEFFSQMHLLPNEYIFASAIS------ACAGIQSLVKGQQIHAYS 126
++ + Q+ E ++ E F +L + ++ S ++ C + + H Y+
Sbjct: 119 LAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYA 178
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
K G FV +L+++Y+K G + +++ E ++V +N ++ ++E E+
Sbjct: 179 CKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAI 238
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
++ GL P+ + I +D G + K N GN A+
Sbjct: 239 DLSSAFHTSGLHPNEITLRLLSRIS--GDDSEAGQV--------KSFEN---GNDASAV- 284
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
++IS N ++ H Y L F +M + + D TF
Sbjct: 285 ------------------SEIISRNKILSGYLHAGQYSALLKCFMDMV-ESDLECDQVTF 325
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
+LA L S+ G+Q+H +++ L+ + V N+L+NMY K I + +FN M
Sbjct: 326 ILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSE 385
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH--AGLVKEGE 424
R+++SWN++IA A L A+ LF Q+ G+KPD T +L A + GL +
Sbjct: 386 RDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQ 445
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
+ +++ KT ++ T LID R + EAE
Sbjct: 446 IHVHAI-KTNNVADSFVS-TALIDAYSRNRCMKEAE 479
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 153/295 (51%), Gaps = 13/295 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++++L C A+ QG +HA +K G D+ VS+ +L++Y KCG M A+ FD +
Sbjct: 526 TLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI 585
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+ V+W+ +ISG + GE AL FSQM L LP+E+ A+ A + + +L +G+
Sbjct: 586 PVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGR 645
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIHA +LK S FVG SL+ MY K G DA ++ N+ ++NA++ G ++
Sbjct: 646 QIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHG 705
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS----VSNDLRKGMILH-CLTVKCKLESN 235
+ ++ ++FK M G+ PD+ +F G L CS VS + +H +K ++E
Sbjct: 706 EGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHY 765
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGLSV 289
+ + + + L+ EAE + E + T +AAC D E G V
Sbjct: 766 SCLADAL----GRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRV 816
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/483 (24%), Positives = 216/483 (44%), Gaps = 40/483 (8%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++S +L C + + S H K+G+ D V+ ++N+Y K GK+ R +F+EM
Sbjct: 154 TLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEM 213
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
R++V W+ M+ + + G A++ S H L PNE I +S +G S +
Sbjct: 214 PYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNE-ITLRLLSRISGDDS--EAG 270
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+ ++ +++S ++S N +++G++
Sbjct: 271 QVKSFENGNDASAVS-----------------------------EIISRNKILSGYLHAG 301
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
Q + F M+ L D+ +F L + L G +HC+ +K L+ V N
Sbjct: 302 QYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSN 361
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +Y K IG A F + E+DLISWN+ IA + + + +F ++ G++
Sbjct: 362 SLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLR-CGLK 420
Query: 301 PDDFTFASILAACAGLAS-VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
PD +T S+L A + L + KQIH H I+ D V AL++ Y++ + +
Sbjct: 421 PDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEV 480
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
LF + ++V+WN +++ + G L+LF M G + D T +L C
Sbjct: 481 LFGRN-NFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFA 539
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
+ +G+ K+ G D+ + ++D+ + G + A+ P+ D + TL+
Sbjct: 540 INQGKQVHAYAIKS-GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD-VAWTTLI 597
Query: 480 SAC 482
S C
Sbjct: 598 SGC 600
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 85/165 (51%), Gaps = 7/165 (4%)
Query: 322 GKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN 381
GK HA ++ + N + + N L++MY+KCG ++ + ++F++M R++VSWN+I+AA+A
Sbjct: 65 GKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQ 124
Query: 382 HRLG-----GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
G A LF ++ + +T +L C H+G V E+ F+ G+
Sbjct: 125 SSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASES-FHGYACKIGL 183
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
D L+++ + GK+ E ++ P +D ++ +L A
Sbjct: 184 DGDDFVAGALVNIYLKFGKVKEGRVLFEEMPY-RDVVLWNLMLKA 227
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/573 (34%), Positives = 322/573 (56%), Gaps = 4/573 (0%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L CS AL G +H V++ G+ + V N ++++YAKCG + AR+VFD M+ R
Sbjct: 150 SILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASR 209
Query: 67 NLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
+ VSW+ + + ++G E L Q + P+ + + +SAC + +L KG+QIH
Sbjct: 210 DEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIH 269
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A ++ + S V +L MY+K G DA V+ +++++N +I G V++ Q E
Sbjct: 270 AQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLE 329
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ +F ML++ + PDR ++ L C+ L G +H VK L S+ GN ++
Sbjct: 330 EAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALI 389
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+YSK + +A + F + ++D++SW + + C + S FK+M GV +
Sbjct: 390 NMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQ-QGVEANK 448
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T+ +L AC+ +++ GK+IHA +++ + D+ V NAL++MY KCG + + ++
Sbjct: 449 ITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEG 508
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M R+VV+WNT+I A + G AL+ FE MK+ ++P++ TF+ +++AC LV+EG
Sbjct: 509 MSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEG 568
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
F SM K YGI P +H+ C++D+L RAG L EAE+ P + G LL+ACR
Sbjct: 569 RRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACR 628
Query: 484 LRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSY 543
+V IGE+ A+Q L+P YV LS +YA+ GMW DVA RK++K+ G+KKEP
Sbjct: 629 AHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGR 688
Query: 544 SMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
S IEV G F + SH + EI L+ L+
Sbjct: 689 SWIEVAGEVHSFVAGDQSHPRTEEIYSELEALT 721
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 165/556 (29%), Positives = 277/556 (49%), Gaps = 41/556 (7%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C K K L G +H +L+ G++P+V + N +L LY CG + AR++FD+ S ++
Sbjct: 50 LLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKS 109
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
+VSW+ MISG+ G A F+ M L P+++ F S +SAC+ +L G+++H
Sbjct: 110 VVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHV 169
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
++ G A+ + VGN+LISMY K G DA V+ + VS+ L + E+ ++
Sbjct: 170 RVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQE 229
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
+ + ML++G+ P R ++ L C L KG +H V+ + S+ V +
Sbjct: 230 SLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTK 289
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y K + +A + F + +D+I+WNT I E+ +F M + V PD
Sbjct: 290 MYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKE-CVAPDRV 348
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T+ +IL+ACA + GK+IHA ++ L DV GNAL+NMY+K G + + ++F+ M
Sbjct: 349 TYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRM 408
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN--------- 415
R+VVSW ++ +A+ + F++M G++ + +T++ +L AC+
Sbjct: 409 PKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGK 468
Query: 416 --HAGLVKEG------------EAYFN--SMEKTYGISP-----DIEHFTCLIDLLGRAG 454
HA +VK G YF S+E +S D+ + LI L + G
Sbjct: 469 EIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNG 528
Query: 455 KLLEAE---EYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERL---AKQLFHLQPTTTSP 508
+ LEA E K + + ++SACR+R V G R ++ + + PT
Sbjct: 529 RGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKH- 587
Query: 509 YVLLSNLYASDGMWGD 524
Y + ++ A G G+
Sbjct: 588 YACMVDILARAGHLGE 603
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 201/380 (52%), Gaps = 2/380 (0%)
Query: 88 LEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMK 147
L++ Q + Y + + +C + L G+Q+H + L+FG ++ N+L+ +Y+
Sbjct: 32 LQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVH 91
Query: 148 VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGG 207
G ++A ++ + ++VS+N +I+G+ ++ F +F LM ++GL PD+F+F
Sbjct: 92 CGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSI 151
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDL 267
L CS L G +H ++ L +N VGN ++++Y+K + +A + F + +D
Sbjct: 152 LSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDE 211
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHA 327
+SW T A + ++ L + M + GVRP T+ ++L+AC LA+++ GKQIHA
Sbjct: 212 VSWTTLTGAYAESGYAQESLKTYHAMLQE-GVRPSRITYMNVLSACGSLAALEKGKQIHA 270
Query: 328 HLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGS 387
++ + DV V AL MY KCG + + ++F + +R+V++WNT+I +
Sbjct: 271 QIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEE 330
Query: 388 ALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLI 447
A +F +M + PD VT++ +L+AC G + G+ K G+ D+ LI
Sbjct: 331 AHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKD-GLVSDVRFGNALI 389
Query: 448 DLLGRAGKLLEAEEYTKKFP 467
++ +AG + +A + + P
Sbjct: 390 NMYSKAGSMKDARQVFDRMP 409
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 156/293 (53%), Gaps = 3/293 (1%)
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
+V + + ++G D + + L+ C + DL G +H ++ ++ N ++ NT++ LY
Sbjct: 30 DVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLY 89
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
+ EA + F K ++SWN I+ +H ++ ++F M + G+ PD FTF
Sbjct: 90 VHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQE-GLEPDKFTF 148
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
SIL+AC+ A++ G+++H ++ L + VGNAL++MYAKCG + + ++F+ M
Sbjct: 149 VSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMAS 208
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
R+ VSW T+ A+A +LK + M G++P +T++ +L+AC +++G+
Sbjct: 209 RDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQI 268
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
+ ++ S D+ T L + + G + +A E + P +D I T++
Sbjct: 269 HAQIVESEHHS-DVRVSTALTKMYIKCGAVKDAREVFECLP-NRDVIAWNTMI 319
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/577 (34%), Positives = 327/577 (56%), Gaps = 5/577 (0%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++ +SLL C+ L G ++HA + G+ P+ + + + N+YAKC + AR+VFD
Sbjct: 226 RTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDR 285
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL----LPNEYIFASAISACAGIQSLVK 118
M R+ V+W+A+++G+ + G A+ +M P+ S + ACA Q+L
Sbjct: 286 MPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGA 345
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+++HA++++ G+ V +++ +Y K G A V+ + N VS+NA+I G+ E
Sbjct: 346 CREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAE 405
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N + +FK M+ +G+ S L C L +G +H L V+ LESN V
Sbjct: 406 NGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNV 465
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N ++ +Y K A + F + K +SWN I C+ E + +F M ++
Sbjct: 466 MNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLEN- 524
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
V+PD FT SI+ A A ++ + IH + IR+ L+QDV V AL++MYAKCG +S +
Sbjct: 525 VKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIAR 584
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
LFN R+V++WN +I + +H G A++LFE+MK++G P+ TF+ +L+AC+HAG
Sbjct: 585 SLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAG 644
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV EG+ YF+SM++ YG+ P +EH+ ++DLLGRAGKL EA + +K P+ V G +
Sbjct: 645 LVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAM 704
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L AC+L ++V + E A+++F L+P +VLL+N+YA+ +W DVA R ++ GL+
Sbjct: 705 LGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQ 764
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
K P +S+++++ F +H + +I L L
Sbjct: 765 KTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKL 801
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 200/413 (48%), Gaps = 20/413 (4%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++ S+L C+ +AL +HA ++ G V VS +L++Y KCG + ARKVFD
Sbjct: 327 AVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFD 386
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
M +RN VSW+AMI G+ + G+ AL F +M + + +A+ AC + L +
Sbjct: 387 GMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDE 446
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+++H ++ G S V N+LI+MY K + A V+ E VS+NA+I G +
Sbjct: 447 GRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQ 506
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N E +F M + + PD F+ + + +D + +H +++ L+ + +V
Sbjct: 507 NGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYV 566
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++ +Y+K + A F ++ +I+WN I + + +F+EM + G
Sbjct: 567 LTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSS-G 625
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG------NALVNMYAKCG 352
P++ TF S+L+AC+ V G++ + + +D G+ +V++ + G
Sbjct: 626 KVPNETTFLSVLSACSHAGLVDEGQEYFSS-----MKEDYGLEPGMEHYGTMVDLLGRAG 680
Query: 353 LISCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLG-GSALKLFEQMKATGI 400
+ ++ +M + + + ++ A H N L SA ++FE G+
Sbjct: 681 KLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGV 733
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 79/150 (52%), Gaps = 4/150 (2%)
Query: 281 ADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV 340
+D L+ F MS G P TF S+L CA A + G+ +HA L L+ +
Sbjct: 203 SDLRGALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALA 262
Query: 341 GNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK-ATG 399
AL NMYAKC + ++F+ M R+ V+WN ++A +A + L +A+ + +M+ G
Sbjct: 263 ATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDG 322
Query: 400 IKPDSVTFIGLLTACNHA---GLVKEGEAY 426
+PD+VT + +L AC A G +E A+
Sbjct: 323 ERPDAVTLVSVLPACADAQALGACREVHAF 352
>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 762
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/582 (35%), Positives = 329/582 (56%), Gaps = 15/582 (2%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L C K + +HA ++K G D + ++N+YAKCG M ARKVFDE+ RN
Sbjct: 75 ILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELPRRN 134
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
+VSW+ +++G+ + LA++ F +M P Y +A+SA + + S G+QIH
Sbjct: 135 VVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQIHG 194
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
YS+K+ + +GNSL S+Y K G A+ + + N++S+ +I+ + +N +
Sbjct: 195 YSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGEAAT 254
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
G + F ML + + P+ F+ L +C V L G +H LT+K ESN + N+IM
Sbjct: 255 GLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMY 314
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEK-----------GLSVFKEM 293
LY K I EA+K F +E L++WN IA + D+ K LS+F ++
Sbjct: 315 LYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKL 374
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
N G++PD FTF+S+L+ C+ L +++ G+Q+HA I+ DV VG ALVNMY KCG
Sbjct: 375 -NRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGS 433
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
I + K F EM R ++SW ++I +A + AL LFE M+ G++P+ +TF+G+L+A
Sbjct: 434 IERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSA 493
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C+HAG+V E YF M+ Y I+P ++H+ CLID+ R G+L EA ++ K+ L +
Sbjct: 494 CSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRLGRLDEAFDFIKEMDLEPNEF 553
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
+ L++ CR + + +G A+QL +L+P T Y LL N+Y S G W +V+ RKM+K
Sbjct: 554 IWSILIAGCRSQGKLELGFYAAEQLLNLKPKDTETYNLLLNMYLSAGKWKEVSRVRKMMK 613
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ L + +S I ++ F SH++ GE+ +L L
Sbjct: 614 EEKLGRLKDWSWISIKDKIYSFKRNARSHAQSGEMYELLGNL 655
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 197/371 (53%), Gaps = 19/371 (5%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+ + C + + Q+IHA+ +K G +F+ L+++Y K G A V+ E
Sbjct: 72 YVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELP 131
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRK--- 219
N+VS+ L+ G+V + +PE +VF+ ML G P ++ L S S+DL
Sbjct: 132 RRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTAL---SASSDLHSKEL 188
Query: 220 GMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSH 279
G +H ++K ++E + +GN++ +LYSK + A KAFR I +K++ISW T I+A
Sbjct: 189 GKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGD 248
Query: 280 CADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG 339
+ GL F EM ++ V P++FT S L+ C + S+ G QIH+ I++ ++
Sbjct: 249 NGEAATGLQFFVEMLSE-CVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLP 307
Query: 340 VGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN-----------HRLGGSA 388
+ N+++ +Y KCG I + KLF+EM ++V+WN +IA HA H+ G A
Sbjct: 308 IKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEA 367
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID 448
L +F ++ +G+KPD TF +L+ C+ +++GE KT G D+ T L++
Sbjct: 368 LSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKT-GFLSDVVVGTALVN 426
Query: 449 LLGRAGKLLEA 459
+ + G + A
Sbjct: 427 MYNKCGSIERA 437
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/438 (29%), Positives = 217/438 (49%), Gaps = 26/438 (5%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A S SS LH +K L G +H +K I+ D + N + +LY+KCG + A K F
Sbjct: 176 ALSASSDLH----SKEL--GKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFR 229
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
+ ++N++SW+ +IS GE L+FF +M + PNE+ SA+S C +QSL
Sbjct: 230 RIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDI 289
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG--- 175
G QIH+ ++K G+ S + NS++ +Y+K G+ +A ++ E +LV++NA+IAG
Sbjct: 290 GTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHAR 349
Query: 176 --------FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLT 227
+Q + +F + R G+ PD F+F+ L +CS L +G +H T
Sbjct: 350 MMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQT 409
Query: 228 VKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGL 287
+K S+ VG ++ +Y+K I A KAF + + LISW + I + ++ L
Sbjct: 410 IKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQAL 469
Query: 288 SVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI-RMRLNQDVGVGNALVN 346
+F++M GVRP+ TF +L+AC+ V + ++ + L++
Sbjct: 470 LLFEDM-RLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLID 528
Query: 347 MYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP-DS 404
M+ + G + ++ EM L N W+ +IA + G L + + +KP D+
Sbjct: 529 MFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQ--GKLELGFYAAEQLLNLKPKDT 586
Query: 405 VTFIGLLTACNHAGLVKE 422
T+ LL AG KE
Sbjct: 587 ETYNLLLNMYLSAGKWKE 604
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 116/222 (52%), Gaps = 1/222 (0%)
Query: 193 LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI 252
+R+G + + L+ C + +H VK + F+ ++ +Y+K +
Sbjct: 61 IREGTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTM 120
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
A K F + ++++SW T + H + E + VF+EM + G P ++T + L+A
Sbjct: 121 ETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREML-EAGAYPTNYTLGTALSA 179
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
+ L S + GKQIH + I+ R+ D +GN+L ++Y+KCG + C+ K F + +NV+SW
Sbjct: 180 SSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISW 239
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
T+I+A ++ + L+ F +M + ++P+ T L+ C
Sbjct: 240 TTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLC 281
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 72/136 (52%), Gaps = 5/136 (3%)
Query: 278 SHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD 337
+ C D+ + LS +E G + + + IL C V ++IHAH+++ ++D
Sbjct: 49 ARCLDFREALSFIRE-----GTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKD 103
Query: 338 VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA 397
+ LVN+YAKCG + + K+F+E+ RNVVSW T++ + + A+++F +M
Sbjct: 104 AFLMTFLVNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLE 163
Query: 398 TGIKPDSVTFIGLLTA 413
G P + T L+A
Sbjct: 164 AGAYPTNYTLGTALSA 179
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/575 (36%), Positives = 330/575 (57%), Gaps = 4/575 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
SIS +L+ C+ + G +H +LKMG+ D +N ++++Y+K G++ A VF ++
Sbjct: 185 SISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDI 244
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+ ++VSW+A+I+G + LAL +M PN + +SA+ ACA + G+
Sbjct: 245 AHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGR 304
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H+ +K S F L+ MY K DA Y + +++++NALI+G+ +
Sbjct: 305 QLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCG 364
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+F M + + ++ + + L+ + ++ +H +++K + S+ +V N
Sbjct: 365 DHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVIN 424
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ Y K N I EA K F +DL+++ + I A S D E+ L ++ +M D ++
Sbjct: 425 SLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQM-QDADIK 483
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD F +S+L ACA L++ + GKQ+H H I+ D+ N+LVNMYAKCG I + +
Sbjct: 484 PDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRA 543
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+E+ +R +VSW+ +I +A H G AL+LF QM G+ P+ +T + +L ACNHAGLV
Sbjct: 544 FSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLV 603
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG+ YF ME +GI P EH+ C+IDLLGR+GKL EA E P D V G LL
Sbjct: 604 NEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLG 663
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
A R+ +++ +G++ AK LF L+P + +VLL+N+YAS GMW +VA RK +KDS +KKE
Sbjct: 664 AARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKE 723
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P S IE++ F V + SHS+ EI L L
Sbjct: 724 PGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQL 758
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 149/492 (30%), Positives = 259/492 (52%), Gaps = 13/492 (2%)
Query: 22 ISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQA 81
+ LHA ++K G D + NH++ LY+KC + ARK+ DE SE ++VSWS+++SG+ Q
Sbjct: 1 MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60
Query: 82 GEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVG 138
G AL F++M LL NE+ F S + AC+ + L G+++H ++ G+ S FV
Sbjct: 61 GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL 198
N+L+ MY K G D+ ++G E N+VS+NAL + +V+++ + +FK M+R G++
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKA 258
P+ FS + L C+ + G +H L +K L+ + F N ++ +YSK I A
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAV 240
Query: 259 FRLIEEKDLISWNTFIAAC--SHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
F+ I D++SWN IA C C D L + EM G RP+ FT +S L ACA +
Sbjct: 241 FQDIAHPDVVSWNAIIAGCVLHDCNDL--ALMLLDEMKGS-GTRPNMFTLSSALKACAAM 297
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
+ G+Q+H+ LI+M + D+ LV+MY+KC ++ + + ++ M +++++WN +I
Sbjct: 298 GFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALI 357
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
+ ++ A+ LF +M + I + T +L + +K + +++ GI
Sbjct: 358 SGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQ-IHTISIKSGI 416
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAK 496
D L+D G+ + EA + ++ +D + ++++A D GE K
Sbjct: 417 YSDFYVINSLLDTYGKCNHIDEASKIFEERTW-EDLVAYTSMITAYSQYGD---GEEALK 472
Query: 497 QLFHLQPTTTSP 508
+Q P
Sbjct: 473 LYLQMQDADIKP 484
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 138/467 (29%), Positives = 247/467 (52%), Gaps = 5/467 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S+L CS + L G +H + G + D V+N ++ +YAKCG + +R++F +
Sbjct: 84 TFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGI 143
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
ERN+VSW+A+ S + Q+ A+ F +M ++PNE+ + ++ACAG+Q G+
Sbjct: 144 VERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGR 203
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+IH LK G F N+L+ MY K G A+ V+ + P++VS+NA+IAG V +
Sbjct: 204 KIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHD 263
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ + M G P+ F+ + L+ C+ G LH +K S+ F
Sbjct: 264 CNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAV 323
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +YSK ++ +A +A+ + +KD+I+WN I+ S C D+ +S+F +M ++ +
Sbjct: 324 GLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSED-ID 382
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ T +++L + A L +++ KQIH I+ + D V N+L++ Y KC I + K+
Sbjct: 383 FNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKI 442
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F E ++V++ ++I A++ + G ALKL+ QM+ IKPD LL AC +
Sbjct: 443 FEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAY 502
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
++G+ K +G DI L+++ + G + +A+ + P
Sbjct: 503 EQGKQLHVHAIK-FGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIP 548
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/565 (35%), Positives = 328/565 (58%), Gaps = 5/565 (0%)
Query: 16 KALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMI-LARKVFDEMSERNLVSWSAM 74
KA + LH LK DV++ L++Y KC + + ++F+ + NL S++A+
Sbjct: 225 KAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAI 284
Query: 75 ISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGY 131
I G+ ++ + + AL F + L +E + A ACA I+ ++G Q+H S+K
Sbjct: 285 IVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLC 344
Query: 132 ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKL 191
S V N+++ MY K G +A LV+ E + VS+NA+IA +N EK +F
Sbjct: 345 QSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVW 404
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
ML+ G+ PD F++ L+ C+ L GM +H +K ++ + FVG ++ +YSK +
Sbjct: 405 MLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGM 464
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ +AEK + E+ ++SWN I+ S E+ F +M + GV PD+FT+A+IL
Sbjct: 465 MEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKML-EMGVDPDNFTYATILD 523
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
CA L +V+ GKQIHA +I+ L D + + LV+MY+KCG + +F + +R+ V+
Sbjct: 524 TCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVT 583
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
WN ++ +A H LG ALK+FE M+ +KP+ TF+ +L AC H GLV++G YF+SM
Sbjct: 584 WNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSML 643
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
YG+ P +EH++C++D++GR+G++ +A E + P D ++ TLLS C++ +V +
Sbjct: 644 SNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVA 703
Query: 492 ERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGT 551
E+ A + L+P ++ YVLLSN+YA+ GMW +V RKM++ +GLKKEP S IE++
Sbjct: 704 EKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSE 763
Query: 552 FEKFTVAEFSHSKIGEINYMLKTLS 576
F V + +H + EI L L+
Sbjct: 764 VHAFLVGDKAHPRSKEIYENLDVLT 788
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 150/537 (27%), Positives = 252/537 (46%), Gaps = 74/537 (13%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
K+ S + CS KAL G HA ++ +P V V+N ++ +Y KC + A KVFD
Sbjct: 43 KTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDG 102
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFS------------------QMHLLPNEYIFA 104
M +R+ VSW+AM+ G+ G+ +A + F +M + + FA
Sbjct: 103 MPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFA 162
Query: 105 SAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSD----------- 153
+ +C+ ++ G QIH ++K G+ G++L+ MY K +D
Sbjct: 163 VVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKE 222
Query: 154 -------ALLVYGEAFEP------------------------------------NLVSFN 170
AL ++G A + NL S+N
Sbjct: 223 MQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYN 282
Query: 171 ALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC 230
A+I G+ + + + +F+L+ + GL D S +G C+V +G+ +H L++K
Sbjct: 283 AIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKS 342
Query: 231 KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVF 290
+SN V N I+ +Y K + EA F + +D +SWN IAA + EK LS+F
Sbjct: 343 LCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLF 402
Query: 291 KEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
M G+ PD+FT+ S+L ACAG ++ G +IH +I+ R+ D VG AL++MY+K
Sbjct: 403 VWMLQS-GMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSK 461
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGL 410
CG++ + KL + + + VVSWN II+ + + A K F +M G+ PD+ T+ +
Sbjct: 462 CGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATI 521
Query: 411 LTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
L C + V+ G+ + K + D + L+D+ + G + + + +K P
Sbjct: 522 LDTCANLVTVELGKQIHAQIIKKE-LQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP 577
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 128/447 (28%), Positives = 225/447 (50%), Gaps = 18/447 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+S C+ K +G+ +H +K Q ++ V+N +L++Y KCG ++ A VF+EM
Sbjct: 315 SLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEM 374
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
R+ VSW+A+I+ H Q G L F M + P+E+ + S + ACAG Q+L G
Sbjct: 375 VSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGM 434
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+IH +K SFVG +LI MY K G A ++ E +VS+NA+I+GF +
Sbjct: 435 EIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQK 494
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
Q E+ + F ML G+ PD F++A L+ C+ + G +H +K +L+S+ ++ +
Sbjct: 495 QSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISS 554
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
T++ +YSK + + + F +D ++WN + + E+ L +F+ M ++ V+
Sbjct: 555 TLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLEN-VK 613
Query: 301 PDDFTFASILAACAGLASVQHG-KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
P+ TF ++L AC + V+ G H+ L L+ + + +V++ + G +S + +
Sbjct: 614 PNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALE 673
Query: 360 LFNEM-LHRNVVSWNTIIAA---HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
L M + V W T+++ H N + A Q++ DS ++ L
Sbjct: 674 LIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPE----DSAAYVLLSNIYA 729
Query: 416 HAGLVKEGEAY-----FNSMEKTYGIS 437
+AG+ E FN ++K G S
Sbjct: 730 NAGMWNEVTKLRKMMRFNGLKKEPGCS 756
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 183/446 (41%), Gaps = 72/446 (16%)
Query: 86 LALEFFSQMHLLPNEY-IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISM 144
L + FS P + F+ C+ ++L G+Q HA + + FV N LI M
Sbjct: 27 LPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQM 86
Query: 145 YMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE-----------NQQPEKGFEVFKL-- 191
Y+K A V+ + + VS+NA++ G+ + P G V +L
Sbjct: 87 YIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFD 146
Query: 192 --MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK- 248
M R G + DR +FA L+ CS D G+ +H L VK + + G+ ++ +Y+K
Sbjct: 147 FRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKC 206
Query: 249 ----------FNLIGEAEKA---------------------------------------- 258
L E +KA
Sbjct: 207 CVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCS 266
Query: 259 ---FRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
F + +L S+N I + + L +F+ + G+ D+ + + ACA
Sbjct: 267 NQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKS-GLGLDEVSLSGAXRACAV 325
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
+ G Q+H ++ ++ V NA+++MY KCG + + +F EM+ R+ VSWN I
Sbjct: 326 IKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAI 385
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYG 435
IAAH + L LF M +G++PD T+ +L AC + G N + K+
Sbjct: 386 IAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSR- 444
Query: 436 ISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ D LID+ + G + +AE+
Sbjct: 445 MGLDSFVGIALIDMYSKCGMMEKAEK 470
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 134/351 (38%), Gaps = 71/351 (20%)
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+++ P K + Q + +F+ + CS L G H + + + F
Sbjct: 19 QSKSPFKTLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVF 78
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND- 296
V N ++ +Y K + +G A K F + ++D +SWN + + D +F M
Sbjct: 79 VTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTG 138
Query: 297 -------------HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA 343
G D TFA +L +C+ L G QIH ++M + DV G+A
Sbjct: 139 CGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSA 198
Query: 344 LVNMYAKCGL----ISCSYKLFNEM---------LH------------------------ 366
L++MYAKC + + +LF EM LH
Sbjct: 199 LLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMK 258
Query: 367 -----------------RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
N+ S+N II +A G AL +F ++ +G+ D V+ G
Sbjct: 259 CNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSG 318
Query: 410 LLTACNHAGLVKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
AC EG + + SM+ +I ++D+ G+ G L+EA
Sbjct: 319 AXRACAVIKGDLEGLQVHGLSMKSL--CQSNICVANAILDMYGKCGALVEA 367
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/578 (35%), Positives = 327/578 (56%), Gaps = 12/578 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+L C A+++G+++H + K+GI DVI+ N +L++Y K ++ AR+VF +M
Sbjct: 224 TMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKM 283
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM--HLLPNEYIFASAISACAGIQSLVKGQQ 121
+ ++ V+W+ MI G+ Q G H +++ F M +P+ S I AC L G+
Sbjct: 284 AVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFVPDMLSITSTIRACGQSGDLQVGKF 343
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEP----NLVSFNALIAGFV 177
+H Y + G+ + N LI MY K G LL E F+ + V++N+LI G+
Sbjct: 344 VHKYLIGSGFECDTVACNILIDMYAKCG----DLLAAQEVFDTTKCKDSVTWNSLINGYT 399
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
++ ++G E FK+M + PD +F L I S D+ +G +HC +K E+
Sbjct: 400 QSGYYKEGLESFKMM-KMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELI 458
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+GN+++ +Y+K + + K F + D+ISWNT IA+ H D G + EM +
Sbjct: 459 IGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTE- 517
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G+ PD+ T IL C+ LA + GK+IH ++ + +V +GNAL+ MY+KCG +
Sbjct: 518 GLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENC 577
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
K+F M ++VV+W +I+A + G ALK F+ M+ +G+ PDSV FI + AC+H+
Sbjct: 578 IKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHS 637
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
G+VKEG +F+ M+ Y + P +EH+ C++DLL R+G L +AEE+ P+ D + G
Sbjct: 638 GMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGA 697
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LLSACR R + I +R++K++ L T YVL+SN+YA+ G W V R +K GL
Sbjct: 698 LLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGL 757
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KKEP S IE+Q F + S + ++ +L+ L
Sbjct: 758 KKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYL 795
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 255/486 (52%), Gaps = 14/486 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + S+++ C++ L+ G +H ++MG + D+ + N ++++Y++ + AR VF+
Sbjct: 121 AFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFE 180
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
EMS R+ VSW+++ISG+ G AL+ + + ++P+ + +S + AC + ++ +
Sbjct: 181 EMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKE 240
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G +H K G A +GN L+SMY K +A V+ + + V++N +I G+ +
Sbjct: 241 GVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQ 300
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ E ++F M+ G +PD S + C S DL+ G +H + E +
Sbjct: 301 LGRHEASVKLFMDMI-DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVA 359
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N ++ +Y+K + A++ F + KD ++WN+ I + Y++GL FK M +
Sbjct: 360 CNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER- 418
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+PD TF +L+ + LA + G+ IH +I+ ++ +GN+L+++YAKCG +
Sbjct: 419 -KPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLL 477
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
K+F+ M +++SWNT+IA+ + ++ +M+ G+ PD T +G+L C+
Sbjct: 478 KVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLA 537
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL---LEAEEYTKKFPLGQDPIVL 475
+ ++G+ + K+ G ++ LI++ + G L ++ +Y K+ +D +
Sbjct: 538 VRRQGKEIHGYIFKS-GFESNVPIGNALIEMYSKCGSLENCIKVFKYMKE----KDVVTW 592
Query: 476 GTLLSA 481
L+SA
Sbjct: 593 TALISA 598
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 135/499 (27%), Positives = 249/499 (49%), Gaps = 13/499 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
SSLL S K Q ++H+ ++ G+ VI S +++ YA+ I + VF +S
Sbjct: 23 SSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISP 82
Query: 66 RNLVS-WSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQ 121
N V W+++I G AL ++++M L P+ + F S I++CA I L G
Sbjct: 83 TNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCI 142
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H ++++ G+ S ++GN+LI MY + +A V+ E + VS+N+LI+G+ N
Sbjct: 143 VHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGF 202
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
E +++ G++PD F+ + L C +++G+ +H + K + + +GN
Sbjct: 203 WEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNG 262
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++++Y KF + EA + F + KD ++WNT I + +E + +F +M + G P
Sbjct: 263 LLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID--GFVP 320
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D + S + AC +Q GK +H +LI D N L++MYAKCG + + ++F
Sbjct: 321 DMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVF 380
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ ++ V+WN++I + L+ F+ MK KPDSVTF+ LL+ + +
Sbjct: 381 DTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQLADIN 439
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL--GQDPIVLGTLL 479
+G + K +G ++ L+D+ + G E ++ K F D I T++
Sbjct: 440 QGRGIHCDVIK-FGFEAELIIGNSLLDVYAKCG---EMDDLLKVFSYMSAHDIISWNTVI 495
Query: 480 SACRLRRDVVIGERLAKQL 498
++ D +G ++ ++
Sbjct: 496 ASSVHFDDCTVGFQMINEM 514
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/579 (35%), Positives = 321/579 (55%), Gaps = 4/579 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++SLL C+ AL +G LH+ V+K GI D+IV +L+LY C + A ++F
Sbjct: 316 TVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTA 375
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
N+V W+ M+ + + F QM L+PN++ + S + C + +L G+
Sbjct: 376 QTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGE 435
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH +K G+ +V + LI MY K G A ++ E ++VS+ ALI+G+ ++
Sbjct: 436 QIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHN 495
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ + FK ML +G+ D F+ + C+ L +G +H + + +GN
Sbjct: 496 LFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGN 555
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++LY++ I EA F I+ KD ISWN I+ + E L VF +M N +
Sbjct: 556 ALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQM-NRAKLE 614
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
FTF S ++A A +A+++ GKQIHA +I+ + D+ V NAL+ YAKCG I + +
Sbjct: 615 ASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARRE 674
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F EM +N VSWN +I ++ H G A+ LFE+MK G P+ VTF+G+L+AC+H GLV
Sbjct: 675 FCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLV 734
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+G YF SM K +G+ P H+ C++DL+ RAG L A ++ ++ P+ D + TLLS
Sbjct: 735 TKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLS 794
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC + ++V +GE A+ L L+P ++ YVLLSN+YA G W R+M+++ G+KKE
Sbjct: 795 ACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKE 854
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSLAA 579
P S IEV+ + F V + H +I L L+ A
Sbjct: 855 PGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNKKA 893
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 146/481 (30%), Positives = 250/481 (51%), Gaps = 7/481 (1%)
Query: 4 SISSLLHHCSKTK-ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
S +S+L CS + ++ +HA ++ G+ I+SN ++ LYAK G +I ARKVFD
Sbjct: 113 SFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDN 172
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
+ ++ VSW AMISG Q G A+ F +MH + P Y+F+S +S C I+ G
Sbjct: 173 LCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVG 232
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+HA K+G + ++V N+L+++Y ++ A V+ + + VSFN+LI+G +
Sbjct: 233 EQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQ 292
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ E+F M R L PD + A L C+ + L KG LH +K + S+ V
Sbjct: 293 GFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVE 352
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ LY + I A + F + ++++ WN + A + + +F++M G+
Sbjct: 353 GALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQM-QIKGL 411
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
P+ FT+ SIL C + ++ G+QIH +I+ +V V + L++MYAK G + ++
Sbjct: 412 IPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHV 471
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+ + +VVSW +I+ +A H L ALK F++M GI+ D++ F ++AC
Sbjct: 472 ILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQA 531
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
+ +G ++ G S D+ L+ L R G++ EA +K +D I L+
Sbjct: 532 LNQGRQ-IHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKID-AKDSISWNGLI 589
Query: 480 S 480
S
Sbjct: 590 S 590
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 143/469 (30%), Positives = 247/469 (52%), Gaps = 5/469 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
SS+L C+K K G LHA V K G + V N ++ LY++ + A KVF +M
Sbjct: 217 SSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQS 276
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQI 122
++ VS++++ISG Q G ALE F++M +L P+ AS +SACA +L KG+Q+
Sbjct: 277 KDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQL 336
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H+Y +K G +S V +L+ +Y+ A ++ A N+V +N ++ F +
Sbjct: 337 HSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNL 396
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
+ F +F+ M +GL+P++F++ L C+ L G +H +K + N +V + +
Sbjct: 397 SESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVL 456
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y+K + A R + E D++SW I+ + + + L FKEM N G++ D
Sbjct: 457 IDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLN-RGIQSD 515
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+ F+S ++ACAG+ ++ G+QIHA ++D+ +GNALV++YA+CG I +Y F
Sbjct: 516 NIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFE 575
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
++ ++ +SWN +I+ A ALK+F QM ++ TF ++A + +K+
Sbjct: 576 KIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQ 635
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQD 471
G+ ++M G DIE LI + G + +A + P D
Sbjct: 636 GKQ-IHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKND 683
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 138/476 (28%), Positives = 238/476 (50%), Gaps = 8/476 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C + +L + LH +LK+G + ++ N ++++Y G + KVF++M R+
Sbjct: 16 LLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRS 75
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK-GQQIH 123
+ SW +ISG + L+ FS M ++ P E FAS + AC+G + ++ +QIH
Sbjct: 76 VRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIH 135
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A + G + N LI +Y K G A V+ + VS+ A+I+GF +N E
Sbjct: 136 ARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEE 195
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ +F M G+ P + F+ L C+ G LH L K +V N ++
Sbjct: 196 EAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALV 255
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
LYS+ AEK F ++ KD +S+N+ I+ + + L +F +M D+ ++PD
Sbjct: 256 TLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDY-LKPDC 314
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T AS+L+ACA ++ G+Q+H+++I+ ++ D+ V AL+++Y C I ++++F
Sbjct: 315 VTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLT 374
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
NVV WN ++ A + ++F QM+ G+ P+ T+ +L C G + G
Sbjct: 375 AQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLG 434
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
E + KT G ++ + LID+ + GKL A + L +D +V T L
Sbjct: 435 EQIHTQVIKT-GFQFNVYVCSVLIDMYAKHGKLDTAHVILR--TLTEDDVVSWTAL 487
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 137/292 (46%), Gaps = 8/292 (2%)
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
M +G+ + ++ L++C S L + LH +K + + N ++ +Y
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ K F + + + SW+ I+ + L +F M ++ V P + +FAS+L
Sbjct: 61 LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEEN-VSPTEISFASVLR 119
Query: 312 ACAG-LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVV 370
AC+G +++ +QIHA +I L + N L+ +YAK GLI + K+F+ + ++ V
Sbjct: 120 ACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSV 179
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSM 430
SW +I+ + + A+ LF +M GI P F +L+ C L GE +++
Sbjct: 180 SWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQ-LHAL 238
Query: 431 EKTYGISPDIEHFTC--LIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
YG S +E + C L+ L R + AE+ K +D + +L+S
Sbjct: 239 VFKYGSS--LETYVCNALVTLYSRMPNFVSAEKVFSKMQ-SKDEVSFNSLIS 287
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/574 (36%), Positives = 334/574 (58%), Gaps = 11/574 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKC--GKMILARKV 59
++S + LL+ CS L + +HA V+ G ++++S ++ + A C M ARK+
Sbjct: 29 SRSFNYLLNCCSSLPDLSR---IHALVVTNGCGQNLLLSTKLI-ITACCLAPTMDYARKM 84
Query: 60 FDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSL 116
FD+M +R++ W+ +I G+ AG AL +S MH L P+ Y F + +CA + +L
Sbjct: 85 FDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSAL 144
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
+G+++H +K G+ S FV +SL++MY + G + LV+GE N+VS+ A+IAG+
Sbjct: 145 REGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGY 204
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
V+N+ ++G VF+ M+ G P+ + L C+ L G ++H +K ++ +
Sbjct: 205 VQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDV 264
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
+ N ++ALY K + A F + ++L+SWN IAA + +F+ M +
Sbjct: 265 SLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAE 324
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
V D T S+++ACA L ++ G+ +H + R L +V + NAL++MYAKCG I
Sbjct: 325 K-VDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDL 383
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ ++F + R+VVSW ++I A A+H G ALKLF +MK G+KP+S TF + TAC H
Sbjct: 384 AREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRH 443
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
+GLV+EG +F SM + Y I P +EH C++DLLGRAG L+EA E+ K P+ D V G
Sbjct: 444 SGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWG 503
Query: 477 TLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSG 536
LL +CR+ ++ + E +A++LF L P T + YVL+SN+YA G W D A RK++++
Sbjct: 504 ALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEERE 563
Query: 537 LKKEPSYSMIEVQGTFEKFTVAEFSHSKI-GEIN 569
LKK P +S++EV F F S S + G IN
Sbjct: 564 LKKIPGHSLVEVNRRFHTFLSGSRSQSSLRGSIN 597
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/574 (35%), Positives = 325/574 (56%), Gaps = 4/574 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+L C A+++G+++H + K+GI DVI+ N +L++Y K ++ AR+VF +M
Sbjct: 224 TMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKM 283
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM--HLLPNEYIFASAISACAGIQSLVKGQQ 121
+ ++ V+W+ MI G+ Q G H +++ F M +P+ S I AC L G+
Sbjct: 284 AVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFVPDMLSITSTIRACGQSGDLQVGKF 343
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H Y + G+ + N LI MY K G A V+ + V++N+LI G+ ++
Sbjct: 344 VHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGY 403
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
++G E FK+M + PD +F L I S D+ +G +HC +K E+ +GN+
Sbjct: 404 YKEGLESFKMM-KMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNS 462
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y+K + + K F + D+ISWNT IA+ H D G + EM + G+ P
Sbjct: 463 LLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTE-GLMP 521
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D+ T IL C+ LA + GK+IH ++ + +V +GNAL+ MY+KCG + K+F
Sbjct: 522 DEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVF 581
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
M ++VV+W +I+A + G ALK F+ M+ +G+ PDSV FI + AC+H+G+VK
Sbjct: 582 KYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVK 641
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
EG +F+ M+ Y + P +EH+ C++DLL R+G L +AEE+ P+ D + G LLSA
Sbjct: 642 EGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSA 701
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
CR R + I +R++K++ L T YVL+SN+YA+ G W V R +K GLKKEP
Sbjct: 702 CRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEP 761
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S IE+Q F + S + ++ +L+ L
Sbjct: 762 GSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYL 795
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 255/486 (52%), Gaps = 14/486 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + S+++ C++ L+ G +H ++MG + D+ + N ++++Y++ + AR VF+
Sbjct: 121 AFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFE 180
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
EMS R+ VSW+++ISG+ G AL+ + + ++P+ + +S + AC + ++ +
Sbjct: 181 EMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKE 240
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G +H K G A +GN L+SMY K +A V+ + + V++N +I G+ +
Sbjct: 241 GVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQ 300
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ E ++F M+ G +PD S + C S DL+ G +H + E +
Sbjct: 301 LGRHEASVKLFMDMI-DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVA 359
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N ++ +Y+K + A++ F + KD ++WN+ I + Y++GL FK M +
Sbjct: 360 CNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER- 418
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+PD TF +L+ + LA + G+ IH +I+ ++ +GN+L+++YAKCG +
Sbjct: 419 -KPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLL 477
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
K+F+ M +++SWNT+IA+ + ++ +M+ G+ PD T +G+L C+
Sbjct: 478 KVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLA 537
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL---LEAEEYTKKFPLGQDPIVL 475
+ ++G+ + K+ G ++ LI++ + G L ++ +Y K+ +D +
Sbjct: 538 VRRQGKEIHGYIFKS-GFESNVPIGNALIEMYSKCGSLENCIKVFKYMKE----KDVVTW 592
Query: 476 GTLLSA 481
L+SA
Sbjct: 593 TALISA 598
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 135/499 (27%), Positives = 249/499 (49%), Gaps = 13/499 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
SSLL S K Q ++H+ ++ G+ VI S +++ YA+ I + VF +S
Sbjct: 23 SSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISP 82
Query: 66 RNLVS-WSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQ 121
N V W+++I G AL ++++M L P+ + F S I++CA I L G
Sbjct: 83 TNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCI 142
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H ++++ G+ S ++GN+LI MY + +A V+ E + VS+N+LI+G+ N
Sbjct: 143 VHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGF 202
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
E +++ G++PD F+ + L C +++G+ +H + K + + +GN
Sbjct: 203 WEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNG 262
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++++Y KF + EA + F + KD ++WNT I + +E + +F +M + G P
Sbjct: 263 LLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID--GFVP 320
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D + S + AC +Q GK +H +LI D N L++MYAKCG + + ++F
Sbjct: 321 DMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVF 380
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ ++ V+WN++I + L+ F+ MK KPDSVTF+ LL+ + +
Sbjct: 381 DTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQLADIN 439
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL--GQDPIVLGTLL 479
+G + K +G ++ L+D+ + G E ++ K F D I T++
Sbjct: 440 QGRGIHCDVIK-FGFEAELIIGNSLLDVYAKCG---EMDDLLKVFSYMSAHDIISWNTVI 495
Query: 480 SACRLRRDVVIGERLAKQL 498
++ D +G ++ ++
Sbjct: 496 ASSVHFDDCTVGFQMINEM 514
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/568 (35%), Positives = 329/568 (57%), Gaps = 4/568 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+ C+ A + G LH LK D I+ L++YAKC +M A KVF+ +
Sbjct: 241 TYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTL 300
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
S++A+I G+ + + L ALE F + +L +E + A++AC+ I+ ++G
Sbjct: 301 PNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGI 360
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H ++K G V N+++ MY K G +A ++ + + VS+NA+IA +N+
Sbjct: 361 QLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNE 420
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ K +F MLR + PD F++ ++ C+ L GM +H VK + + FVG+
Sbjct: 421 EIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGS 480
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y K ++ EAEK +EEK +SWN+ I+ S E F +M + GV
Sbjct: 481 ALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQML-EMGVI 539
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD+FT+A++L CA +A+++ GKQIHA ++++ L+ DV + + LV+MY+KCG + S +
Sbjct: 540 PDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLM 599
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F + R+ V+W+ +I A+A H G A+KLFE+M+ +KP+ FI +L AC H G V
Sbjct: 600 FEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYV 659
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+G YF M+ YG+ P +EH++C++DLLGR+ ++ EA + + D ++ TLLS
Sbjct: 660 DKGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLS 719
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
C+++ +V + E+ L L P +S YVLL+N+YA+ GMWG+VA R ++K+ LKKE
Sbjct: 720 NCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKE 779
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
P S IEV+ F V + +H + EI
Sbjct: 780 PGCSWIEVRDEVHTFLVGDKAHPRSEEI 807
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 153/481 (31%), Positives = 259/481 (53%), Gaps = 6/481 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S +L CS + G+ +H ++MG + DV+ + ++++Y+KC K+ A ++F EM
Sbjct: 140 TFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREM 199
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
ERNLV WSA+I+G+ Q + L+ F M + ++ +AS +CAG+ + G
Sbjct: 200 PERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGT 259
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H ++LK +A S +G + + MY K SDA V+ P S+NA+I G+
Sbjct: 260 QLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQD 319
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
Q K E+F+ + R L D S +G L CSV +G+ LH L VKC L N V N
Sbjct: 320 QGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVAN 379
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
TI+ +Y K + EA F +E +D +SWN IAA + K LS+F M +
Sbjct: 380 TILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRS-TME 438
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PDDFT+ S++ ACAG ++ +G +IH +++ + D VG+ALV+MY KCG++ + K+
Sbjct: 439 PDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKI 498
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
+ + + VSWN+II+ ++ + +A + F QM G+ PD+ T+ +L C + +
Sbjct: 499 HDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATI 558
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+ G+ + K + D+ + L+D+ + G + ++ +K P +D + ++
Sbjct: 559 ELGKQIHAQILKL-NLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTP-KRDYVTWSAMIC 616
Query: 481 A 481
A
Sbjct: 617 A 617
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/492 (27%), Positives = 237/492 (48%), Gaps = 36/492 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S +L CS KAL G HA ++ P + V+N ++ Y K M A KVFD M
Sbjct: 8 TFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRM 67
Query: 64 SERNLVSWSAMISGHHQAGEHLLA-------------------------------LEFFS 92
R+++SW+ MI G+ + G A +E F
Sbjct: 68 PHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127
Query: 93 QMHLL--PNEY-IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
+M L P++Y F+ + AC+GI+ G Q+H +++ G+ + G++L+ MY K
Sbjct: 128 RMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCK 187
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
A ++ E E NLV ++A+IAG+V+N + +G ++FK ML+ G+ + ++A
Sbjct: 188 KLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFR 247
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
C+ + + G LH +K + +G + +Y+K + + +A K F + S
Sbjct: 248 SCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQS 307
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
+N I + K L +F+ + + + D+ + + L AC+ + G Q+H
Sbjct: 308 YNAIIVGYARQDQGLKALEIFQSLQRTY-LSFDEISLSGALTACSVIKGHLEGIQLHGLA 366
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
++ L ++ V N +++MY KCG + + +F++M R+ VSWN IIAAH + L
Sbjct: 367 VKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTL 426
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
LF M + ++PD T+ ++ AC + G + K+ G+ D + L+D+
Sbjct: 427 SLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKS-GMGLDWFVGSALVDM 485
Query: 450 LGRAGKLLEAEE 461
G+ G L+EAE+
Sbjct: 486 YGKCGMLMEAEK 497
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 190/391 (48%), Gaps = 33/391 (8%)
Query: 100 EYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG 159
++ F+ + C+ +++L G+Q HA + + +V N L+ Y K + A V+
Sbjct: 6 KFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFD 65
Query: 160 EAFEPNLVSFNALIAGFVE-----------NQQPE--------------------KGFEV 188
+++S+N +I G+ E + PE K E+
Sbjct: 66 RMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEI 125
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
F M + D +F+ L+ CS D G+ +HCL ++ E++ G+ ++ +YSK
Sbjct: 126 FVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
+ A + FR + E++L+ W+ IA + +GL +FK+M G+ T+AS
Sbjct: 186 CKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLK-VGMGVSQSTYAS 244
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
+ +CAGL++ + G Q+H H ++ D +G A ++MYAKC +S ++K+FN + +
Sbjct: 245 VFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPP 304
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
S+N II +A G AL++F+ ++ T + D ++ G LTAC+ EG +
Sbjct: 305 RQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEG-IQLH 363
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+ G+ +I ++D+ G+ G L+EA
Sbjct: 364 GLAVKCGLGFNICVANTILDMYGKCGALVEA 394
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/574 (33%), Positives = 330/574 (57%), Gaps = 7/574 (1%)
Query: 8 LLHHCSKTKALQQGISLHA--AVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
LL + TK L+ G ++H+ V + +I N ++N YAK ++ +A +FD M E
Sbjct: 35 LLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPE 94
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQ 121
RN+VSWSA+++G+ G L + M ++ PNEYI A AIS+C + +G+Q
Sbjct: 95 RNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQ 154
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
H LK G++ ++V N+L+SMY K DA+ V+ E ++V++N++++ VEN
Sbjct: 155 CHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGY 214
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+G EV + M+ + + D+ +F +C+ DLR G+ +H + +E + +V +
Sbjct: 215 LREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSA 274
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
I+ +Y K A F ++ ++++ W +A+C +E+ L++F +M ++ V+
Sbjct: 275 IINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQEN-VKS 333
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
++FT+A +L ACAGL++ ++G +H H + V VGNAL+NMYAK G I + K+F
Sbjct: 334 NEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVF 393
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
++M+HR++++WN +I ++H LG AL +F+ M A P+ VTF G+L+AC H GLV+
Sbjct: 394 SDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQ 453
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
EG Y + + K +G+ P +EH+TC++ LL + G+L EA + + P+ D + TLL+A
Sbjct: 454 EGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNA 513
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
C + ++ +G +A+ + + P Y LLSN+YA + W V RK+++D +KKEP
Sbjct: 514 CHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIKKEP 573
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S IE+ FT + H G+ +K L
Sbjct: 574 GVSWIEIGNVTHIFTSEDNKHPDYGQTYQKVKEL 607
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/559 (35%), Positives = 325/559 (58%), Gaps = 4/559 (0%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G +LH +K G+ V V + +L++Y K G++ + KVFDEM RN V+W+A+I+G +
Sbjct: 135 GTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVR 194
Query: 81 AGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
AG L +FS M + + Y +A A+ A A +L G+ IH +LK G+ SFV
Sbjct: 195 AGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFV 254
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
NSL +MY K G L + + ++VS+ ++ +++ + + G + FK M +
Sbjct: 255 ANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNV 314
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
+P+ ++F+ + C+ L+ G LH + + V N+IM LYSK + K
Sbjct: 315 IPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSK 374
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F ++ +D+I+W+T IAA S E+ M ++ G +P++F AS+L+ C +A
Sbjct: 375 VFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSE-GPKPNEFALASVLSVCGSMA 433
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
++ GKQ+HAH++ + L Q V +AL+ MYAKCG I+ + K+F + +++SW +I+
Sbjct: 434 ILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMIS 493
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
+A H A++LFE ++ G++PDSVTFIG+LTAC+HAG+V G YFNSM K Y I+
Sbjct: 494 GYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHIT 553
Query: 438 PDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQ 497
P EH+ C+IDLL RAG+L +AE + P+ D +V TLL ACR+ DV G+R A +
Sbjct: 554 PSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAE 613
Query: 498 LFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTV 557
+ L P ++ L+N++A+ G W + A R ++K G+ KEP +S ++V+ + F
Sbjct: 614 VLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVS 673
Query: 558 AEFSHSKIGEINYMLKTLS 576
+ SH + +I +L+ L+
Sbjct: 674 GDRSHPQGEDIYNILEELA 692
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 212/393 (53%), Gaps = 5/393 (1%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH 95
D+ +N+ L + K + AR +FD++ +R+ VSW+ +ISG+ + + AL FS+M
Sbjct: 48 DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107
Query: 96 LLP----NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
L + ++ + + C + + G +H +S+K G + FVG++L+ MYMK+G
Sbjct: 108 LQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEI 167
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
+ V+ E N V++ A+I G V E G F M R + D +++A L+
Sbjct: 168 GRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKAS 227
Query: 212 SVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
+ S L G +H T+K + N FV N++ +Y+K + FR + D++SW
Sbjct: 228 ADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWT 287
Query: 272 TFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
T + A + GL FK M + V P+++TF+++++ CA A ++ G+Q+HAH++
Sbjct: 288 TIVTAYIQMGKEDCGLQAFKRMRASN-VIPNEYTFSAVISCCANFARLKWGEQLHAHVLC 346
Query: 332 MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
+ + V N+++ +Y+KCG ++ K+F M R++++W+TIIAA++ G A +
Sbjct: 347 VGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEY 406
Query: 392 FEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+M++ G KP+ +L+ C ++++G+
Sbjct: 407 LSRMRSEGPKPNEFALASVLSVCGSMAILEQGK 439
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 158/309 (51%), Gaps = 4/309 (1%)
Query: 17 ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMIS 76
AL G S+H LK G + V+N + +Y KCGK+ F +M ++VSW+ +++
Sbjct: 232 ALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVT 291
Query: 77 GHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYAS 133
+ Q G+ L+ F +M +++PNEY F++ IS CA L G+Q+HA+ L G+ +
Sbjct: 292 AYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVN 351
Query: 134 ISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLML 193
V NS++++Y K G + V+ ++++++ +IA + + E+ FE M
Sbjct: 352 ALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMR 411
Query: 194 RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
+G P+ F+ A L +C L +G LH + LE V + ++ +Y+K I
Sbjct: 412 SEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIA 471
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
EA K F + D+ISW I+ + ++ + +F+ + G+RPD TF +L AC
Sbjct: 472 EASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQK-VGLRPDSVTFIGVLTAC 530
Query: 314 AGLASVQHG 322
+ V G
Sbjct: 531 SHAGMVDLG 539
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 170/335 (50%), Gaps = 14/335 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S+++ C+ L+ G LHA VL +G + V+N ++ LY+KCG++ KVF M
Sbjct: 320 TFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSM 379
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
R++++WS +I+ + Q G A E+ S+M PNE+ AS +S C + L +G+
Sbjct: 380 KFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGK 439
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HA+ L G S V ++LI MY K G ++A ++ ++++ +++S+ A+I+G+ E+
Sbjct: 440 QLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHG 499
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVG 239
++ E+F+ + + GL PD +F G L CS + + G + ++ + +
Sbjct: 500 HSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHY 559
Query: 240 NTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKE-MSNDH 297
++ L + + +AE R + + D + W+T + AC D + G E + D
Sbjct: 560 GCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDP 619
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
T A+I AA GK A IRM
Sbjct: 620 NCAGTHITLANIFAA--------KGKWKEAANIRM 646
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/559 (35%), Positives = 325/559 (58%), Gaps = 4/559 (0%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G +LH +K G+ V V + +L++Y K G++ + KVFDEM RN V+W+A+I+G +
Sbjct: 135 GTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVR 194
Query: 81 AGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
AG L +FS M + + Y +A A+ A A +L G+ IH +LK G+ SFV
Sbjct: 195 AGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFV 254
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
NSL +MY K G L + + ++VS+ ++ +++ + + G + FK M +
Sbjct: 255 ANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNV 314
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
+P+ ++F+ + C+ L+ G LH + + V N+IM LYSK + K
Sbjct: 315 IPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSK 374
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F ++ +D+I+W+T IAA S E+ M ++ G +P++F AS+L+ C +A
Sbjct: 375 VFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSE-GPKPNEFALASVLSVCGSMA 433
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
++ GKQ+HAH++ + L Q V +AL+ MYAKCG I+ + K+F + +++SW +I+
Sbjct: 434 ILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMIS 493
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
+A H A++LFE ++ G++PDSVTFIG+LTAC+HAG+V G YFNSM K Y I+
Sbjct: 494 GYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHIT 553
Query: 438 PDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQ 497
P EH+ C+IDLL RAG+L +AE + P+ D +V TLL ACR+ DV G+R A +
Sbjct: 554 PSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAE 613
Query: 498 LFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTV 557
+ L P ++ L+N++A+ G W + A R ++K G+ KEP +S ++V+ + F
Sbjct: 614 VLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVS 673
Query: 558 AEFSHSKIGEINYMLKTLS 576
+ SH + +I +L+ L+
Sbjct: 674 GDRSHPQGEDIYNILEELA 692
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 212/393 (53%), Gaps = 5/393 (1%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH 95
D+ +N+ L + K + AR +FD++ +R+ VSW+ +ISG+ + + AL FS+M
Sbjct: 48 DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107
Query: 96 LLP----NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
L + ++ + + C + + G +H +S+K G + FVG++L+ MYMK+G
Sbjct: 108 LQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEI 167
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
+ V+ E N V++ A+I G V E G F M R + D +++A L+
Sbjct: 168 GRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKAS 227
Query: 212 SVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
+ S L G +H T+K + N FV N++ +Y+K + FR + D++SW
Sbjct: 228 ADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWT 287
Query: 272 TFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
T + A + GL FK M + V P+++TF+++++ CA A ++ G+Q+HAH++
Sbjct: 288 TIVTAYIQMGKEDCGLQAFKRMRASN-VIPNEYTFSAVISCCANFARLKWGEQLHAHVLC 346
Query: 332 MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
+ + V N+++ +Y+KCG ++ K+F M R++++W+TIIAA++ G A +
Sbjct: 347 VGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEY 406
Query: 392 FEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+M++ G KP+ +L+ C ++++G+
Sbjct: 407 LSRMRSEGPKPNEFALASVLSVCGSMAILEQGK 439
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 160/313 (51%), Gaps = 4/313 (1%)
Query: 13 SKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWS 72
+ + AL G S+H LK G + V+N + +Y KCGK+ F +M ++VSW+
Sbjct: 228 ADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWT 287
Query: 73 AMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKF 129
+++ + Q G+ L+ F +M +++PNEY F++ IS CA L G+Q+HA+ L
Sbjct: 288 TIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCV 347
Query: 130 GYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVF 189
G+ + V NS++++Y K G + V+ ++++++ +IA + + E+ FE
Sbjct: 348 GFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYL 407
Query: 190 KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF 249
M +G P+ F+ A L +C L +G LH + LE V + ++ +Y+K
Sbjct: 408 SRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKC 467
Query: 250 NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
I EA K F + D+ISW I+ + ++ + +F+ + G+RPD TF +
Sbjct: 468 GSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQK-VGLRPDSVTFIGV 526
Query: 310 LAACAGLASVQHG 322
L AC+ V G
Sbjct: 527 LTACSHAGMVDLG 539
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 170/335 (50%), Gaps = 14/335 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S+++ C+ L+ G LHA VL +G + V+N ++ LY+KCG++ KVF M
Sbjct: 320 TFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSM 379
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
R++++WS +I+ + Q G A E+ S+M PNE+ AS +S C + L +G+
Sbjct: 380 KFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGK 439
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HA+ L G S V ++LI MY K G ++A ++ ++++ +++S+ A+I+G+ E+
Sbjct: 440 QLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHG 499
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVG 239
++ E+F+ + + GL PD +F G L CS + + G + ++ + +
Sbjct: 500 HSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHY 559
Query: 240 NTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKE-MSNDH 297
++ L + + +AE R + + D + W+T + AC D + G E + D
Sbjct: 560 GCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDP 619
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
T A+I AA GK A IRM
Sbjct: 620 NCAGTHITLANIFAA--------KGKWKEAANIRM 646
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/580 (35%), Positives = 329/580 (56%), Gaps = 5/580 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++SLL CS AL G H+ +K G+ D+I+ +L+LY KC + A + F
Sbjct: 374 TVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLST 433
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
N+V W+ M+ + + + F+QM + PN++ + S + C+ ++++ G+
Sbjct: 434 ETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGE 493
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH LK G+ +V + LI MY K+G AL ++ E ++VS+ A+IAG+ +++
Sbjct: 494 QIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHE 553
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ + +FK M QG+ D FA + C+ L +G +H + VGN
Sbjct: 554 KFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGN 613
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++LY++ + +A AF I KD ISWN+ I+ + E+ LS+F +MS G
Sbjct: 614 ALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSK-AGQE 672
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ FTF ++A A +A+V+ GKQIHA +I+ + + V N L+ +YAKCG I + +
Sbjct: 673 INSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQ 732
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F EM +N +SWN ++ ++ H G AL LFE MK G+ P+ VTF+G+L+AC+H GLV
Sbjct: 733 FFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLV 792
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG YF SM + +G+ P EH+ C++DLLGR+G L A + ++ P+ D +V TLLS
Sbjct: 793 DEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLS 852
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC + +++ IGE A L L+P ++ YVLLSN+YA G WG R+M+KD G+KKE
Sbjct: 853 ACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKE 912
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS-LAA 579
P S IEV + F + H + +I L+ L+ LAA
Sbjct: 913 PGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDLNELAA 952
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 147/465 (31%), Positives = 252/465 (54%), Gaps = 5/465 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
SS+L C+K + + G LH VLK G + V N ++ LY++ G I A +VF+ M +
Sbjct: 275 SSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQ 334
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQI 122
R+ VS++++ISG Q G ALE F +M L P+ AS +SAC+ + +L+ G+Q
Sbjct: 335 RDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQF 394
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H+Y++K G +S + +L+ +Y+K A + N+V +N ++ +
Sbjct: 395 HSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNL 454
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
+ F++F M +G+ P++F++ L CS + G +H +K + N +V + +
Sbjct: 455 NESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVL 514
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y+K + A K FR ++EKD++SW IA + + + L++FKEM D G+ D
Sbjct: 515 IDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEM-QDQGIHSD 573
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+ FAS ++ACAG+ ++ G+QIHA + D+ VGNALV++YA+CG + +Y F+
Sbjct: 574 NIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFD 633
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
++ ++ +SWN++I+ A AL LF QM G + +S TF ++A + VK
Sbjct: 634 KIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKL 693
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
G+ + KT G + E LI L + G + +AE + P
Sbjct: 694 GKQIHAMIIKT-GHDSETEVSNVLITLYAKCGNIDDAERQFFEMP 737
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 143/461 (31%), Positives = 243/461 (52%), Gaps = 6/461 (1%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+HA + G + + V N +++LY K G + A+KVFD + +R+ VSW AM+SG Q+G
Sbjct: 192 IHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGC 251
Query: 84 HLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
A+ F QMH + P YIF+S +SAC ++ G+Q+H LK G++ ++V N+
Sbjct: 252 EEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNA 311
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
L+++Y ++G A V+ + + VS+N+LI+G + +K E+FK M L PD
Sbjct: 312 LVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPD 371
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+ A L CS L G H +K + S+ + ++ LY K + I A + F
Sbjct: 372 CVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFL 431
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
E ++++ WN + A + + +F +M + G+ P+ FT+ SIL C+ L +V
Sbjct: 432 STETENVVLWNVMLVAYGLLDNLNESFKIFTQMQME-GIEPNQFTYPSILRTCSSLRAVD 490
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G+QIH +++ +V V + L++MYAK G + + K+F + ++VVSW +IA +A
Sbjct: 491 LGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYA 550
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
H AL LF++M+ GI D++ F ++AC + +G+ ++ G S D+
Sbjct: 551 QHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQ-IHAQACVSGYSDDL 609
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
L+ L R GK+ +A K +D I +L+S
Sbjct: 610 SVGNALVSLYARCGKVRDAYFAFDKI-FSKDNISWNSLISG 649
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/456 (29%), Positives = 227/456 (49%), Gaps = 6/456 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C + G LH +LKMG +V++ +++LY G + A VFDEM R
Sbjct: 74 LLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRP 133
Query: 68 LVSWSAMIS---GHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKG-QQIH 123
L W+ ++ AG L Q + P+E +A + C G ++IH
Sbjct: 134 LSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIH 193
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A ++ GY + FV N LI +Y K G+ + A V+ + + VS+ A+++G ++ E
Sbjct: 194 ARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEE 253
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ +F M G+ P + F+ L C+ + G LH L +K +V N ++
Sbjct: 254 EAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALV 313
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
LYS+ AE+ F + ++D +S+N+ I+ S +K L +FK+M D ++PD
Sbjct: 314 TLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLD-CLKPDC 372
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T AS+L+AC+ + ++ GKQ H++ I+ ++ D+ + AL+++Y KC I +++ F
Sbjct: 373 VTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLS 432
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
NVV WN ++ A+ + K+F QM+ GI+P+ T+ +L C+ V G
Sbjct: 433 TETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLG 492
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
E + KT G ++ + LID+ + GKL A
Sbjct: 493 EQIHTQVLKT-GFQFNVYVSSVLIDMYAKLGKLDHA 527
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 184/366 (50%), Gaps = 5/366 (1%)
Query: 99 NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY 158
N + + C G ++H LK G+ + + L+ +Y+ G A+ V+
Sbjct: 67 NSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVF 126
Query: 159 GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLR 218
E L +N ++ FV + + +F+ ML++ + PD ++AG L C D+
Sbjct: 127 DEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCG-GGDVP 185
Query: 219 KGMI--LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
+ +H T+ E++ FV N ++ LY K + A+K F ++++D +SW ++
Sbjct: 186 FHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSG 245
Query: 277 CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
S E+ + +F +M GV P + F+S+L+AC + + G+Q+H +++ +
Sbjct: 246 LSQSGCEEEAVLLFCQMHTS-GVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSL 304
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
+ V NALV +Y++ G + ++FN ML R+ VS+N++I+ + AL+LF++M
Sbjct: 305 ETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMC 364
Query: 397 ATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+KPD VT LL+AC+ G + G+ F+S G+S DI L+DL + +
Sbjct: 365 LDCLKPDCVTVASLLSACSSVGALLVGKQ-FHSYAIKAGMSSDIILEGALLDLYVKCSDI 423
Query: 457 LEAEEY 462
A E+
Sbjct: 424 KTAHEF 429
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
F + + GVR + T+ +L C G ++H +++M +V + L+++Y
Sbjct: 55 FLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYI 114
Query: 350 KCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
G + + +F+EM R + WN ++ ++ G L LF +M +KPD T+ G
Sbjct: 115 AFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAG 174
Query: 410 LLTACNHAGLVKEGEAYFNSMEKTYG--ISPDIEH--FTC--LIDLLGRAGKLLEAEE 461
+L C G+ F+ +EK + I+ E+ F C LIDL + G L A++
Sbjct: 175 VLRGCG------GGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKK 226
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/568 (36%), Positives = 320/568 (56%), Gaps = 6/568 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S +++ C+ ++ L+ G +H AV++ G + DV +N ++++Y+K G + +A VF++M
Sbjct: 209 SCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPA 268
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
++VSW+A ISG G ALE QM L+PN + +S + ACAG + G+QI
Sbjct: 269 ADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQI 328
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H + +K FV L+ MY K G+ DA V+ +L+ +NALI+G + +
Sbjct: 329 HGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRH 388
Query: 183 EKGFEVFKLMLRQGLLPD--RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ +F M ++GL D R + A L+ + S + +H L K L S+ V N
Sbjct: 389 GEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVIN 448
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ Y K + A K F+ D+IS T + A S C E + +F +M G+
Sbjct: 449 GLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRK-GLE 507
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD F +S+L AC L++ + GKQ+HAHLI+ + DV GNALV YAKCG I +
Sbjct: 508 PDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMA 567
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+ + R +VSW+ +I A H G AL LF +M G+ P+ +T +L+ACNHAGLV
Sbjct: 568 FSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLV 627
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+ + YF SM++T+GI EH+ C+ID+LGRAGKL +A E P + V G LL
Sbjct: 628 DDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLG 687
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
A R+ RD +G A++LF L+P + +VLL+N YAS GMW ++A RK++KDS +KKE
Sbjct: 688 ASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKE 747
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
P+ S +E++ F V + SH +I
Sbjct: 748 PAMSWVEIKDKVHTFIVGDKSHPMTRDI 775
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 129/413 (31%), Positives = 215/413 (52%), Gaps = 10/413 (2%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM----SERNLVSWSAMIS 76
G +HA + + DV V+N ++ +Y G + AR++FDE ERN VSW+ MIS
Sbjct: 119 GAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMIS 178
Query: 77 GHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYAS 133
+ + + A+ F +M PNE+ F+ ++AC G + L G+Q+H ++ GY
Sbjct: 179 AYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEK 238
Query: 134 ISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLML 193
F N+L+ MY K+G A V+ + ++VS+NA I+G V + + E+ M
Sbjct: 239 DVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMK 298
Query: 194 RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
GL+P+ F+ + L+ C+ + G +H VK + + FV ++ +Y+K +
Sbjct: 299 SSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLD 358
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD--DFTFASILA 311
+A K F + +DLI WN I+ CSH + + LS+F M + G+ D T AS+L
Sbjct: 359 DARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKE-GLDLDVNRTTLASVLK 417
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
+ A ++ H +Q+HA ++ L D V N L++ Y KCG + + K+F E +++S
Sbjct: 418 STASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIIS 477
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
T++ A + G A+KLF QM G++PDS LL AC ++G+
Sbjct: 478 STTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGK 530
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/409 (30%), Positives = 211/409 (51%), Gaps = 15/409 (3%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++I S L +++L G LH+ +LK G+ SNH+L LY++C AR VFDE
Sbjct: 5 ETIGSALARFGTSRSLFAGAHLHSHLLKSGLLAGF--SNHLLTLYSRCRLPSAARAVFDE 62
Query: 63 MSERNLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKG 119
+ + VSWS++++ + G + LLA + NE+ + ++ G
Sbjct: 63 IPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDVRF---G 119
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF----EPNLVSFNALIAG 175
Q+HA ++ FV N+L+++Y G +A ++ E E N VS+N +I+
Sbjct: 120 AQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISA 179
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+V+N Q VF+ M+ G P+ F F+ + C+ S DL G +H V+ E +
Sbjct: 180 YVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKD 239
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC-SHCADYEKGLSVFKEMS 294
F N ++ +YSK I A F + D++SWN FI+ C +H D+ + L + +M
Sbjct: 240 VFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDH-RALELLLQMK 298
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
+ G+ P+ FT +S+L ACAG + G+QIH +++ + D V LV+MYAK G +
Sbjct: 299 SS-GLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFL 357
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPD 403
+ K+F+ M R+++ WN +I+ ++ G L LF +M+ G+ D
Sbjct: 358 DDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLD 406
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 186/392 (47%), Gaps = 18/392 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+L C+ A G +H ++K D V+ ++++YAK G + ARKVFD M
Sbjct: 308 TLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFM 367
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH-----LLPNEYIFASAISACAGIQSLVK 118
R+L+ W+A+ISG G H L F +M L N AS + + A +++
Sbjct: 368 PRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICH 427
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+Q+HA + K G S S V N LI Y K G A+ V+ E+ +++S ++ +
Sbjct: 428 TRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQ 487
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
E ++F MLR+GL PD F + L C+ + +G +H +K + S+ F
Sbjct: 488 CDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFA 547
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
GN ++ Y+K I +A+ AF + E+ ++SW+ I + ++ L +F M D G
Sbjct: 548 GNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRML-DEG 606
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA------LVNMYAKCG 352
V P+ T S+L+AC V K+ + + G+ ++++ + G
Sbjct: 607 VAPNHITLTSVLSACNHAGLVDDAKKYFE-----SMKETFGIDRTEEHYACMIDILGRAG 661
Query: 353 LISCSYKLFNEM-LHRNVVSWNTIIAAHANHR 383
+ + +L N M N W ++ A HR
Sbjct: 662 KLEDAMELVNNMPFQANAAVWGALLGASRVHR 693
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 90/187 (48%), Gaps = 7/187 (3%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+SSLL+ C+ A +QG +HA ++K DV N ++ YAKCG + A F +
Sbjct: 513 LSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLP 572
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
ER +VSWSAMI G Q G AL+ F +M + PN S +SAC LV +
Sbjct: 573 ERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSAC-NHAGLVDDAK 631
Query: 122 IHAYSLK--FGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIAGFVE 178
+ S+K FG +I + + G DA+ LV F+ N + AL+
Sbjct: 632 KYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRV 691
Query: 179 NQQPEKG 185
++ PE G
Sbjct: 692 HRDPELG 698
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/566 (36%), Positives = 327/566 (57%), Gaps = 6/566 (1%)
Query: 14 KTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSA 73
K +L G +H LK+G+ + VSN ++N+Y K K AR VFD MSER+L+SW++
Sbjct: 327 KVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNS 386
Query: 74 MISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGI-QSLVKGQQIHAYSLKF 129
+I+G Q G + A+ F Q+ L P++Y S + A + + + L +Q+H +++K
Sbjct: 387 VIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKI 446
Query: 130 GYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVF 189
S SFV +LI Y + +A +++ E +LV++NA++AG+ ++ K ++F
Sbjct: 447 NNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLF 505
Query: 190 KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF 249
LM +QG D F+ A + C + +G +H +K + + +V + I+ +Y K
Sbjct: 506 ALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKC 565
Query: 250 NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
+ A+ AF I D ++W T I+ C + E+ VF +M GV PD+FT A++
Sbjct: 566 GDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQM-RLMGVLPDEFTIATL 624
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
A + L +++ G+QIHA+ +++ D VG +LV+MYAKCG I +Y LF + N+
Sbjct: 625 AKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNI 684
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNS 429
+WN ++ A H G L+LF+QMK+ GIKPD VTFIG+L+AC+H+GLV E + S
Sbjct: 685 TAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRS 744
Query: 430 MEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVV 489
M YGI P+IEH++CL D LGRAG + +AE + + + TLL+ACR++ D
Sbjct: 745 MHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTE 804
Query: 490 IGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQ 549
G+R+A +L L+P +S YVLLSN+YA+ W ++ AR M+K +KK+P +S IEV+
Sbjct: 805 TGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVK 864
Query: 550 GTFEKFTVAEFSHSKIGEINYMLKTL 575
F V + S+ + I +K +
Sbjct: 865 NKIHIFVVDDRSNRQTELIYRKVKDM 890
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 198/393 (50%), Gaps = 15/393 (3%)
Query: 75 ISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGY 131
+S + +G++ L+ F+ M + ++ F ++ + SL GQQ+H +LK G
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346
Query: 132 ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKL 191
+ V NSLI+MY K+ A V+ E +L+S+N++IAG +N + +F
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMIL----HCLTVKCKLESNPFVGNTIMALYS 247
+LR GL PD+++ L+ S L +G+ L H +K S+ FV ++ YS
Sbjct: 407 LLRCGLKPDQYTMTSVLKAAS---SLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYS 463
Query: 248 KFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFA 307
+ + EAE F DL++WN +A + D K L +F M + G R DDFT A
Sbjct: 464 RNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALM-HKQGERSDDFTLA 521
Query: 308 SILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR 367
++ C L ++ GKQ+HA+ I+ + D+ V + +++MY KCG +S + F+ +
Sbjct: 522 TVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVP 581
Query: 368 NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG-EAY 426
+ V+W T+I+ + A +F QM+ G+ PD T L A + +++G + +
Sbjct: 582 DDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIH 641
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
N+++ P + T L+D+ + G + +A
Sbjct: 642 ANALKLNCTNDPFVG--TSLVDMYAKCGSIDDA 672
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 124/553 (22%), Positives = 238/553 (43%), Gaps = 82/553 (14%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
L + + L G HA +L P+ + N+++++Y+KCG + AR+VFD+M +R+
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRD 104
Query: 68 LVSWSAMISGHHQAGEHLLA--LEFFSQMHLLPNEYIFASAIS------ACAGIQSLVKG 119
LVSW+++++ + Q+ E ++ + F +L + ++ S ++ C +
Sbjct: 105 LVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWAS 164
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ H Y+ K G FV +L+++Y+K G + +++ E ++V +N ++ ++E
Sbjct: 165 ESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEM 224
Query: 180 QQPEKGFEVFKLMLRQGLLPDRF-------------------SFAGGLEICSVS------ 214
E+ ++ GL P+ SFA G + SVS
Sbjct: 225 GFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRN 284
Query: 215 --------------------------------------------NDLRKGMILHCLTVKC 230
+ L G +HC+ +K
Sbjct: 285 KGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKL 344
Query: 231 KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVF 290
L+ V N+++ +Y K G A F + E+DLISWN+ IA + + + +F
Sbjct: 345 GLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLF 404
Query: 291 KEMSNDHGVRPDDFTFASILAACAGLAS-VQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
++ G++PD +T S+L A + L + KQ+H H I++ D V AL++ Y+
Sbjct: 405 MQLLR-CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYS 463
Query: 350 KCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
+ + + LF E + ++V+WN ++A + G LKLF M G + D T
Sbjct: 464 RNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLAT 522
Query: 410 LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLG 469
+ C + +G+ K+ G D+ + ++D+ + G + A+ P+
Sbjct: 523 VFKTCGFLFAINQGKQVHAYAIKS-GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVP 581
Query: 470 QDPIVLGTLLSAC 482
D + T++S C
Sbjct: 582 DD-VAWTTMISGC 593
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 153/298 (51%), Gaps = 19/298 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++++ C A+ QG +HA +K G D+ VS+ +L++Y KCG M A+ FD +
Sbjct: 519 TLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI 578
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+ V+W+ MISG + GE A FSQM L LP+E+ A+ A + + +L +G+
Sbjct: 579 PVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGR 638
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIHA +LK + FVG SL+ MY K G DA ++ N+ ++NA++ G ++
Sbjct: 639 QIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHG 698
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS----VSNDLRKGMILHC-LTVKCKLESN 235
+ ++ ++FK M G+ PD+ +F G L CS VS + +H +K ++E
Sbjct: 699 EGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHY 758
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIE----EKDLISWNTFIAACSHCADYEKGLSV 289
+ + + + L+ +AE LIE E + T +AAC D E G V
Sbjct: 759 SCLADAL----GRAGLVKQAEN---LIESMSMEASASMYRTLLAACRVQGDTETGKRV 809
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 10/209 (4%)
Query: 206 GGLEICSVSNDLRKGMILHCLTVKCKLESNP--FVGNTIMALYSKFNLIGEAEKAFRLIE 263
G L S+DL G H + E NP F+ N ++++YSK + A + F +
Sbjct: 44 GFLRNAITSSDLMLGKCTHARILT--FEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 264 EKDLISWNTFIAA---CSHCA--DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
++DL+SWN+ +AA S C + ++ +F+ + D V T + +L C
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQD-VVYTSRMTLSPMLKLCLHSGY 160
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA 378
V + H + ++ L+ D V ALVN+Y K G + LF EM +R+VV WN ++ A
Sbjct: 161 VWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKA 220
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTF 407
+ A+ L ++G+ P+ +T
Sbjct: 221 YLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/576 (35%), Positives = 332/576 (57%), Gaps = 7/576 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S+++ C +L+ G +HA ++ G + VS +LN+YAK G + + VF+ M+E
Sbjct: 225 SAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTE 284
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
N VSW+AMISG G HL A + F +M PN Y S A + + G+++
Sbjct: 285 HNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEV 344
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVS--FNALIAGFVENQ 180
+ + G VG +LI MY K G DA V+ F V+ +NA+I+G+ ++
Sbjct: 345 QNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSG 404
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF-VG 239
++ E++ M + G+ D +++ + S L+ G ++H + +KC L+ V
Sbjct: 405 CSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVN 464
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N I YSK + + K F +EE+D++SW T + A S + E+ L+ F M + G
Sbjct: 465 NAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLM-REEGF 523
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
P+ FTF+S+L +CA L +++G+Q+H L + L+ + + +AL++MYAKCG I+ + K
Sbjct: 524 APNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGK 583
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F+++ + ++VSW II+ +A H L AL+LF +M+ +GIK ++VT + +L AC+H G+
Sbjct: 584 VFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGM 643
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V+EG YF ME YG+ P++EH+ C+IDLLGR G+L +A E+ +K P+ + +V TLL
Sbjct: 644 VEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLL 703
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
CR+ +V +GE A+++ ++P ++ YVLLSN Y G + D R ++KD G+KK
Sbjct: 704 GGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKK 763
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
EP YS I V+G KF + H + EI L+ L
Sbjct: 764 EPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEEL 799
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 236/465 (50%), Gaps = 10/465 (2%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPD--VIVSNHVLNLYAKCGKMILARKVF 60
+ + +L C++ ++++ ++H VLK + +++ NH ++Y+KC + A VF
Sbjct: 119 QDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVF 178
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLV 117
DEM +RN+ SW+ MI G + G +FF +M +LP+++ +++ I +C G+ SL
Sbjct: 179 DEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLE 238
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+ +HA + G+A+ FV SL++MY K+G D+ V+ E N VS+NA+I+G
Sbjct: 239 LGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCT 298
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
N + F++F M P+ ++ + D+ G + + +E N
Sbjct: 299 SNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVL 358
Query: 238 VGNTIMALYSKFNLIGEAEKAF--RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
VG ++ +YSK + +A F I WN I+ S ++ L ++ +M
Sbjct: 359 VGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQ 418
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN-QDVGVGNALVNMYAKCGLI 354
+ G+ D +T+ S+ A A S+Q G+ +H +++ L+ V V NA+ + Y+KCG +
Sbjct: 419 N-GITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFL 477
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
K+F+ M R++VSW T++ A++ LG AL F M+ G P+ TF +L +C
Sbjct: 478 EDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISC 537
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
++ G + K G+ + + LID+ + G + EA
Sbjct: 538 ASLCFLEYGRQVHGLLCKA-GLDTEKCIESALIDMYAKCGSITEA 581
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 92/178 (51%), Gaps = 7/178 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+L C+ L+ G +H + K G+ + + + ++++YAKCG + A KVFD++
Sbjct: 529 TFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKI 588
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
S ++VSW+A+ISG+ Q G AL+ F +M L N + AC+ +V+
Sbjct: 589 SNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSH-GGMVEEG 647
Query: 121 QIHAYSLKFGYASISFVGN--SLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIAG 175
+ ++ GY + + + +I + +VG DA+ + EPN + + L+ G
Sbjct: 648 LFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGG 705
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/576 (35%), Positives = 332/576 (57%), Gaps = 7/576 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S+++ C +L+ G +HA ++ G + VS +LN+YAK G + + VF+ M+E
Sbjct: 171 SAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTE 230
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
N VSW+AMISG G HL A + F +M PN Y S A + + G+++
Sbjct: 231 HNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEV 290
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVS--FNALIAGFVENQ 180
+ + G VG +LI MY K G DA V+ F V+ +NA+I+G+ ++
Sbjct: 291 QNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSG 350
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF-VG 239
++ E++ M + G+ D +++ + S L+ G ++H + +KC L+ V
Sbjct: 351 CSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVN 410
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N I YSK + + K F +EE+D++SW T + A S + E+ L+ F M + G
Sbjct: 411 NAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLM-REEGF 469
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
P+ FTF+S+L +CA L +++G+Q+H L + L+ + + +AL++MYAKCG I+ + K
Sbjct: 470 APNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGK 529
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F+++ + ++VSW II+ +A H L AL+LF +M+ +GIK ++VT + +L AC+H G+
Sbjct: 530 VFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGM 589
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V+EG YF ME YG+ P++EH+ C+IDLLGR G+L +A E+ +K P+ + +V TLL
Sbjct: 590 VEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLL 649
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
CR+ +V +GE A+++ ++P ++ YVLLSN Y G + D R ++KD G+KK
Sbjct: 650 GGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKK 709
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
EP YS I V+G KF + H + EI L+ L
Sbjct: 710 EPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEEL 745
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 236/465 (50%), Gaps = 10/465 (2%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPD--VIVSNHVLNLYAKCGKMILARKVF 60
+ + +L C++ ++++ ++H VLK + +++ NH ++Y+KC + A VF
Sbjct: 65 QDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVF 124
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLV 117
DEM +RN+ SW+ MI G + G +FF +M +LP+++ +++ I +C G+ SL
Sbjct: 125 DEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLE 184
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+ +HA + G+A+ FV SL++MY K+G D+ V+ E N VS+NA+I+G
Sbjct: 185 LGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCT 244
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
N + F++F M P+ ++ + D+ G + + +E N
Sbjct: 245 SNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVL 304
Query: 238 VGNTIMALYSKFNLIGEAEKAF--RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
VG ++ +YSK + +A F I WN I+ S ++ L ++ +M
Sbjct: 305 VGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQ 364
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN-QDVGVGNALVNMYAKCGLI 354
+ G+ D +T+ S+ A A S+Q G+ +H +++ L+ V V NA+ + Y+KCG +
Sbjct: 365 N-GITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFL 423
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
K+F+ M R++VSW T++ A++ LG AL F M+ G P+ TF +L +C
Sbjct: 424 EDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISC 483
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
++ G + K G+ + + LID+ + G + EA
Sbjct: 484 ASLCFLEYGRQVHGLLCKA-GLDTEKCIESALIDMYAKCGSITEA 527
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 92/178 (51%), Gaps = 7/178 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+L C+ L+ G +H + K G+ + + + ++++YAKCG + A KVFD++
Sbjct: 475 TFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKI 534
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
S ++VSW+A+ISG+ Q G AL+ F +M L N + AC+ +V+
Sbjct: 535 SNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSH-GGMVEEG 593
Query: 121 QIHAYSLKFGYASISFVGN--SLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIAG 175
+ ++ GY + + + +I + +VG DA+ + EPN + + L+ G
Sbjct: 594 LFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGG 651
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/567 (35%), Positives = 333/567 (58%), Gaps = 12/567 (2%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L+ G +H V+K+G+ +V + N +L LY++ G+ A VF M+ER+L+SW++M++
Sbjct: 414 LKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMAC 473
Query: 78 HHQAGEHLLALEFFS---QMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
+ Q G+ L L+ + QM + N FASA++AC+ + L++ + +HA + G+
Sbjct: 474 YVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDF 533
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
VGN+L++MY K+G +A V +P+ V++NALI G EN++P + + +KL+
Sbjct: 534 LIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIRE 593
Query: 195 QGLLPDRFSFAGGLEICSVSNDLRK-GMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
+G+ + + L CS +DL K GM +H V ES+ +V N+++ +Y+K +
Sbjct: 594 KGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLN 653
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
+ F + K I+WN +AA +H E+ L +F EM N GV D F+F+ LAA
Sbjct: 654 SSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNV-GVNLDQFSFSGGLAAT 712
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
A LA ++ G+Q+H +I++ D+ V NA ++MY KCG + K+ + ++R+ +SWN
Sbjct: 713 ANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWN 772
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT 433
+I+A A H A + F +M G KPD VTF+ LL+ACNH GLV EG AY++SM +
Sbjct: 773 ILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTRE 832
Query: 434 YGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGER 493
+G+ P IEH C+IDLLGR+G+L AE + K+ P+ + + +LL+ACR+ ++ + +
Sbjct: 833 FGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARK 892
Query: 494 LAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFE 553
A+ L L P+ S YVL SN+ A+ G W DV RK + + +KK+P+ S ++++
Sbjct: 893 TAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVH 952
Query: 554 KFTVAEFSH-------SKIGEINYMLK 573
F + E H +K+GE+ M K
Sbjct: 953 SFGMGEKYHPQASRISAKLGELMKMTK 979
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 247/465 (53%), Gaps = 7/465 (1%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G + +++ G + V V+N ++++++ + A VFD M+E +++SW+AMIS +
Sbjct: 316 GYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAH 375
Query: 81 AG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
G E L + +H N +S +S C+ + +L G+ IH +K G S +
Sbjct: 376 HGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCI 435
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
N+L+++Y + G S DA LV+ E +L+S+N+++A +V++ + G ++ +L+ G
Sbjct: 436 CNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGK 495
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
+ + +FA L CS L + I+H L + VGN ++ +Y K ++ EA+K
Sbjct: 496 VMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKK 555
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
+ + + D ++WN I + + + + +K + + G+ + T S+L AC+
Sbjct: 556 VLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYK-LIREKGIPANYITMVSVLGACSAPD 614
Query: 318 S-VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
++HG IHAH++ D V N+L+ MYAKCG ++ S +F+ + +++ ++WN ++
Sbjct: 615 DLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMV 674
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
AA+A+H G ALK+F +M+ G+ D +F G L A + +++EG+ + + G
Sbjct: 675 AANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQ-LHGLVIKLGF 733
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
D+ +D+ G+ G++ + + + P+ + + L+SA
Sbjct: 734 ESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PINRSRLSWNILISA 777
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 241/459 (52%), Gaps = 6/459 (1%)
Query: 13 SKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWS 72
S+ + G +LHA + + + +N ++N+Y+K G + AR VFDEM RN SWS
Sbjct: 105 SEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWS 164
Query: 73 AMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLV-KGQQIHAYSLK 128
M+SG+ + G + A+ F QM L PN ++ AS I+AC+ + +G Q+H + +K
Sbjct: 165 TMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVK 224
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
G +VG +L+ Y +G +A ++ E + N+VS+ +L+ G+ ++ P + V
Sbjct: 225 TGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNV 284
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
++ M ++G+ ++ +FA C + D G + ++ E + V N++++++S
Sbjct: 285 YQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSS 344
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
F+ + EA F + E D+ISWN I+A +H + L F M + H + T +S
Sbjct: 345 FSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHN-ETNSTTLSS 403
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
+L+ C+ + +++ G+ IH ++++ L+ +V + N L+ +Y++ G + +F M R+
Sbjct: 404 LLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERD 463
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
++SWN+++A + LK+ ++ G + VTF L AC++ + E + +
Sbjct: 464 LISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESK-IVH 522
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
++ G + L+ + G+ G ++EA++ + P
Sbjct: 523 ALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP 561
>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial; Flags: Precursor
gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/578 (35%), Positives = 328/578 (56%), Gaps = 8/578 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +SLL C+ + L+ G H+ ++K + ++ V N ++++YAKCG + AR++F+ M
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+R+ V+W+ +I + Q A + F +M+L + + AS + AC + L +G+
Sbjct: 490 CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGK 549
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H S+K G G+SLI MY K G DA V+ E ++VS NALIAG+ +N
Sbjct: 550 QVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN 609
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN-PFVG 239
E+ +F+ ML +G+ P +FA +E C L G H K S ++G
Sbjct: 610 L-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLG 668
Query: 240 NTIMALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
+++ +Y + EA F L K ++ W ++ S YE+ L +KEM +D G
Sbjct: 669 ISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHD-G 727
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
V PD TF ++L C+ L+S++ G+ IH+ + + + D N L++MYAKCG + S
Sbjct: 728 VLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSS 787
Query: 359 KLFNEMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++F+EM R NVVSWN++I +A + ALK+F+ M+ + I PD +TF+G+LTAC+HA
Sbjct: 788 QVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHA 847
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
G V +G F M YGI ++H C++DLLGR G L EA+++ + L D + +
Sbjct: 848 GKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSS 907
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL ACR+ D + GE A++L L+P +S YVLLSN+YAS G W RK+++D G+
Sbjct: 908 LLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGV 967
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KK P YS I+V+ F + SHS+IG+I L+ L
Sbjct: 968 KKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDL 1005
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 140/423 (33%), Positives = 228/423 (53%), Gaps = 8/423 (1%)
Query: 32 GIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFF 91
G +PD + V+N Y + GK+ AR +F EMS ++V+W+ MISGH + G +A+E+F
Sbjct: 256 GHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYF 315
Query: 92 SQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKV 148
M + S +SA + +L G +HA ++K G AS +VG+SL+SMY K
Sbjct: 316 FNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKC 375
Query: 149 GYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGL 208
A V+ E N V +NA+I G+ N + K E+F M G D F+F L
Sbjct: 376 EKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLL 435
Query: 209 EICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLI 268
C+ S+DL G H + +K KL N FVGN ++ +Y+K + +A + F + ++D +
Sbjct: 436 STCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNV 495
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
+WNT I + + + +FK M N G+ D AS L AC + + GKQ+H
Sbjct: 496 TWNTIIGSYVQDENESEAFDLFKRM-NLCGIVSDGACLASTLKACTHVHGLYQGKQVHCL 554
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
++ L++D+ G++L++MY+KCG+I + K+F+ + +VVS N +IA ++ + L A
Sbjct: 555 SVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEA 613
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID 448
+ LF++M G+ P +TF ++ AC+ + G + + K G S + E+ I
Sbjct: 614 VVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKR-GFSSEGEYLG--IS 670
Query: 449 LLG 451
LLG
Sbjct: 671 LLG 673
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 136/460 (29%), Positives = 249/460 (54%), Gaps = 12/460 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+L L G+ +HA +K+G+ ++ V + ++++Y+KC KM A KVF+ +
Sbjct: 329 TLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEAL 388
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
E+N V W+AMI G+ GE +E F M +++ F S +S CA L G
Sbjct: 389 EEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGS 448
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q H+ +K A FVGN+L+ MY K G DA ++ + + V++N +I +V+++
Sbjct: 449 QFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDE 508
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ F++FK M G++ D A L+ C+ + L +G +HCL+VKC L+ + G+
Sbjct: 509 NESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGS 568
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +YSK +I +A K F + E ++S N IA S + E+ + +F+EM GV
Sbjct: 569 SLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLT-RGVN 626
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG-VGNALVNMYAKCGLISCSYK 359
P + TFA+I+ AC S+ G Q H + + + + +G +L+ MY ++ +
Sbjct: 627 PSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACA 686
Query: 360 LFNEMLH-RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
LF+E+ +++V W +++ H+ + ALK +++M+ G+ PD TF+ +L C+
Sbjct: 687 LFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLS 746
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFT--CLIDLLGRAGKL 456
++EG A + + + ++ D++ T LID+ + G +
Sbjct: 747 SLREGRAIHSLI---FHLAHDLDELTSNTLIDMYAKCGDM 783
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 232/467 (49%), Gaps = 40/467 (8%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S +L C++ ++ G +H +++KMG++ + ++++YAKC ++ AR+VF+ +
Sbjct: 162 TFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI 221
Query: 64 SERNLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
+ N V W+ + SG+ +AG E +L E P+ F
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFV---------------- 265
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++I+ Y+++G DA L++GE P++V++N +I+G +
Sbjct: 266 -------------------TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG 306
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E F M + + R + L + +L G+++H +K L SN +VG+
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS 366
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++++YSK + A K F +EEK+ + WN I +H + K + +F +M + G
Sbjct: 367 SLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSS-GYN 425
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
DDFTF S+L+ CA ++ G Q H+ +I+ +L +++ VGNALV+MYAKCG + + ++
Sbjct: 426 IDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQI 485
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F M R+ V+WNTII ++ A LF++M GI D L AC H +
Sbjct: 486 FERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGL 545
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+G+ + + G+ D+ + LID+ + G + +A + P
Sbjct: 546 YQGKQ-VHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 226/468 (48%), Gaps = 42/468 (8%)
Query: 17 ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMIS 76
AL+ G ++H+ L +GI + + N +++LYAKC ++ A K FD + E+++ +W++M+S
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 77 GHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYAS 133
+ G+ L F + + PN++ F+ +S CA ++ G+QIH +K G
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 134 ISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLML 193
S+ G +L+ MY K SDA V+ +PN V + L +G+V+ PE+ VF+ M
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 194 RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
+G PD +F T++ Y + +
Sbjct: 254 DEGHRPDHLAFV-----------------------------------TVINTYIRLGKLK 278
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
+A F + D+++WN I+ + F M V+ T S+L+A
Sbjct: 279 DARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKS-SVKSTRSTLGSVLSAI 337
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
+A++ G +HA I++ L ++ VG++LV+MY+KC + + K+F + +N V WN
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWN 397
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT 433
+I +A++ ++LF MK++G D TF LL+ C + ++ G + F+S+
Sbjct: 398 AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG-SQFHSIIIK 456
Query: 434 YGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
++ ++ L+D+ + G L +A + ++ +D + T++ +
Sbjct: 457 KKLAKNLFVGNALVDMYAKCGALEDARQIFERM-CDRDNVTWNTIIGS 503
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 146/340 (42%), Gaps = 40/340 (11%)
Query: 74 MISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYAS 133
++ H Q + LL + Q L + +F A +L G+ +H+ SL G S
Sbjct: 37 VLPSHDQIHQRLLEI-CLGQCKLFKSRKVFDEMPQRLA--LALRIGKAVHSKSLILGIDS 93
Query: 134 ISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLML 193
+GN+++ +Y K S A + + E ++ ++N++++ + +P K F +
Sbjct: 94 EGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLF 152
Query: 194 RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
+ P++F+F+ L C+ ++ G +HC +K LE N + G ++ +Y+K + I
Sbjct: 153 ENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRIS 212
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
+A + F I + + + W + E+ + VF+ M D G RPD F ++
Sbjct: 213 DARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM-RDEGHRPDHLAFVTV---- 267
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
+N Y + G + + LF EM +VV+WN
Sbjct: 268 -------------------------------INTYIRLGKLKDARLLFGEMSSPDVVAWN 296
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+I+ H A++ F M+ + +K T +L+A
Sbjct: 297 VMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/573 (35%), Positives = 324/573 (56%), Gaps = 6/573 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S+L C+ L +G +HA V++ DV V N ++ +Y KCG ++ AR +FD+M
Sbjct: 137 TFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKM 196
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
R+ +SW+AMISG+ + E L LE F +M L P+ S ISAC + G
Sbjct: 197 PTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGT 256
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H+Y ++ Y V NSLI MY+ VG+ +A V+ ++VS+ +I+G V+N
Sbjct: 257 QLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNL 316
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
P+K E +K M G +PD + A L C+ L GM LH L + V N
Sbjct: 317 LPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVAN 376
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +YSK I +A + F I +KD+ISW + I + L F++M +
Sbjct: 377 SLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKS--K 434
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P+ T S L+ACA + ++ GK+IHAH ++ + D + NA++++Y +CG + +
Sbjct: 435 PNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQ 494
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN + ++V +WN ++ +A G ++LF++M + I PD VTFI LL AC+ +G+V
Sbjct: 495 FN-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMV 553
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG YF M+ Y I+P+++H+ C++DLLGRAGKL EA E+ ++ P+ DP + G LL+
Sbjct: 554 TEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLN 613
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ R V++GE A+ +F + Y+LL NLYA G W +VA R+ +K+ GL +
Sbjct: 614 ACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVD 673
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLK 573
P S +EV+G F + H ++ EIN +L+
Sbjct: 674 PGCSWVEVKGKVHAFLSGDNFHPQMQEINVVLE 706
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 135/458 (29%), Positives = 239/458 (52%), Gaps = 9/458 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQP-DVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+L+ C + +G + AVL + V + N +L+++ + G + A VF M E
Sbjct: 38 ALIRLCENKRGYSEGEYVWKAVLSSLVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRMGE 97
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQI 122
R+L SW+ ++ G+ +AG AL + ++ + P+ Y F S + +CAG LV+G+++
Sbjct: 98 RDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREV 157
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
HA+ ++F + V N+LI+MY+K G A +++ + + +S+NA+I+G+ EN +
Sbjct: 158 HAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDEC 217
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
+G E+F M + PD + + C + D R G LH V+ + N V N++
Sbjct: 218 LEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSL 277
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y EAE F +E +D++SW T I+ C +K L +K M G PD
Sbjct: 278 IQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEIT-GTMPD 336
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+ T AS+L+ACA L + G ++H R V V N+L++MY+KC I + ++F+
Sbjct: 337 EVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFH 396
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
++ ++V+SW ++I + AL F +M KP+SVT I L+AC G +
Sbjct: 397 QIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKS-KPNSVTLISALSACARVGALMC 455
Query: 423 G-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
G E + ++++ G + + ++DL R G++ A
Sbjct: 456 GKEIHAHALKAGMGFDGFLPN--AILDLYVRCGRMRTA 491
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/567 (35%), Positives = 333/567 (58%), Gaps = 12/567 (2%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L+ G +H V+K+G+ +V + N +L LY++ G+ A VF M+ER+L+SW++M++
Sbjct: 1064 LKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMAC 1123
Query: 78 HHQAGEHLLALEFFS---QMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
+ Q G+ L L+ + QM + N FASA++AC+ + L++ + +HA + G+
Sbjct: 1124 YVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDF 1183
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
VGN+L++MY K+G +A V +P+ V++NALI G EN++P + + +KL+
Sbjct: 1184 LIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIRE 1243
Query: 195 QGLLPDRFSFAGGLEICSVSNDLRK-GMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
+G+ + + L CS +DL K GM +H V ES+ +V N+++ +Y+K +
Sbjct: 1244 KGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLN 1303
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
+ F + K I+WN +AA +H E+ L +F EM N GV D F+F+ LAA
Sbjct: 1304 SSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNV-GVNLDQFSFSGGLAAT 1362
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
A LA ++ G+Q+H +I++ D+ V NA ++MY KCG + K+ + ++R+ +SWN
Sbjct: 1363 ANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWN 1422
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT 433
+I+A A H A + F +M G KPD VTF+ LL+ACNH GLV EG AY++SM +
Sbjct: 1423 ILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTRE 1482
Query: 434 YGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGER 493
+G+ P IEH C+IDLLGR+G+L AE + K+ P+ + + +LL+ACR+ ++ + +
Sbjct: 1483 FGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARK 1542
Query: 494 LAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFE 553
A+ L L P+ S YVL SN+ A+ G W DV RK + + +KK+P+ S ++++
Sbjct: 1543 TAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVH 1602
Query: 554 KFTVAEFSH-------SKIGEINYMLK 573
F + E H +K+GE+ M K
Sbjct: 1603 SFGMGEKYHPQASRISAKLGELMKMTK 1629
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 182/544 (33%), Positives = 293/544 (53%), Gaps = 5/544 (0%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L C KA +QG +H ++ G D+ ++ ++ Y K G +I AR VFD M ER+
Sbjct: 36 ILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERS 95
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
+VSW+AM+SG+ Q G A FS M + N++ + SA+ AC ++ L G Q+
Sbjct: 96 VVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQG 155
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
K + FV ++L+ + K G DA ++G E ++VS+NA+I G+ +
Sbjct: 156 CIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADD 215
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
F +F+ MLR GL+PD ++ L + L +H + + S V ++
Sbjct: 216 SFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLIN 275
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYE-KGLSVFKEMSNDHGVRPDD 303
Y+K + A+ + + +KDL S I +H Y L +FKEM N + DD
Sbjct: 276 AYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEM-NQMNIGMDD 334
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
S+L CA LAS G QIHA ++ + + DV +GNAL++MYAK G I + + F+E
Sbjct: 335 VILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDE 394
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M +NV+SW ++I+ +A H G A+ L+++M++ G KP+ VTF+ LL AC+H GL EG
Sbjct: 395 MEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEG 454
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
FN+M Y I P EH++C++DL R G L EA K + + + G +L A
Sbjct: 455 CECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASS 514
Query: 484 LRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSY 543
+ + +G+ A LF++QP + YV+L+++Y++ G+W D RK++++ KK Y
Sbjct: 515 IYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGY 574
Query: 544 SMIE 547
S +
Sbjct: 575 SFFQ 578
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 247/465 (53%), Gaps = 7/465 (1%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G + +++ G + V V+N ++++++ + A VFD M+E +++SW+AMIS +
Sbjct: 966 GYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAH 1025
Query: 81 AG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
G E L + +H N +S +S C+ + +L G+ IH +K G S +
Sbjct: 1026 HGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCI 1085
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
N+L+++Y + G S DA LV+ E +L+S+N+++A +V++ + G ++ +L+ G
Sbjct: 1086 CNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGK 1145
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
+ + +FA L CS L + I+H L + VGN ++ +Y K ++ EA+K
Sbjct: 1146 VMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKK 1205
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
+ + + D ++WN I + + + + +K + + G+ + T S+L AC+
Sbjct: 1206 VLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYK-LIREKGIPANYITMVSVLGACSAPD 1264
Query: 318 S-VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
++HG IHAH++ D V N+L+ MYAKCG ++ S +F+ + +++ ++WN ++
Sbjct: 1265 DLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMV 1324
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
AA+A+H G ALK+F +M+ G+ D +F G L A + +++EG+ + + G
Sbjct: 1325 AANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQ-LHGLVIKLGF 1383
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
D+ +D+ G+ G++ + + + P+ + + L+SA
Sbjct: 1384 ESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PINRSRLSWNILISA 1427
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 241/459 (52%), Gaps = 6/459 (1%)
Query: 13 SKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWS 72
S+ + G +LHA + + + +N ++N+Y+K G + AR VFDEM RN SWS
Sbjct: 755 SEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWS 814
Query: 73 AMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLV-KGQQIHAYSLK 128
M+SG+ + G + A+ F QM L PN ++ AS I+AC+ + +G Q+H + +K
Sbjct: 815 TMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVK 874
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
G +VG +L+ Y +G +A ++ E + N+VS+ +L+ G+ ++ P + V
Sbjct: 875 TGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNV 934
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
++ M ++G+ ++ +FA C + D G + ++ E + V N++++++S
Sbjct: 935 YQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSS 994
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
F+ + EA F + E D+ISWN I+A +H + L F M + H + T +S
Sbjct: 995 FSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHN-ETNSTTLSS 1053
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
+L+ C+ + +++ G+ IH ++++ L+ +V + N L+ +Y++ G + +F M R+
Sbjct: 1054 LLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERD 1113
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
++SWN+++A + LK+ ++ G + VTF L AC++ + E + +
Sbjct: 1114 LISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKI-VH 1172
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
++ G + L+ + G+ G ++EA++ + P
Sbjct: 1173 ALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP 1211
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 203/435 (46%), Gaps = 14/435 (3%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S L C+ + L GI + + K ++ V + +++ ++KCGKM A +F M ER
Sbjct: 136 SALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMER 195
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
++VSW+AMI G+ G + F M L+P+ Y S + A A L+ QIH
Sbjct: 196 DVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIH 255
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV-ENQQP 182
+ GY S V LI+ Y K G A + + +L S ALI G+ E
Sbjct: 256 GIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYS 315
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
++FK M + + D L IC+ G +H +K + + +GN +
Sbjct: 316 VDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNAL 375
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y+K I +A++AF +EEK++ISW + I+ + +S++K+M + G +P+
Sbjct: 376 IDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESK-GFKPN 434
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLI-RMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D TF S+L AC+ G + +++ + + + +V+++A+ GL+ +Y L
Sbjct: 435 DVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLL 494
Query: 362 NEM-LHRNVVSWNTIIAAHANH---RLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++ + N W I+ A + + LG A M+ +SV ++ L + + A
Sbjct: 495 CKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQP----ENSVNYVVLASIYSAA 550
Query: 418 GLVKEGEAYFNSMEK 432
GL + ME+
Sbjct: 551 GLWDDAWKIRKLMEE 565
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 171/376 (45%), Gaps = 3/376 (0%)
Query: 87 ALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYM 146
AL+ S + ++ + C ++ +G IH + + G+ S + LI Y+
Sbjct: 17 ALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYV 76
Query: 147 KVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAG 206
KVG A V+ E ++VS+ A+++G+ +N + EK F +F M G+ ++F++
Sbjct: 77 KVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGS 136
Query: 207 GLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKD 266
L C+ L G+ + K + N FV + ++ +SK + +A F + E+D
Sbjct: 137 ALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERD 196
Query: 267 LISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
++SWN I + + +F+ M G+ PD +T S+L A A + QIH
Sbjct: 197 VVSWNAMIGGYAVQGFADDSFCMFRSMLRG-GLVPDCYTLGSVLRASAEGGGLIIANQIH 255
Query: 327 AHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGG 386
+ ++ V L+N YAK G + + L ML +++ S +I +A+ +
Sbjct: 256 GIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYS 315
Query: 387 -SALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
AL LF++M I D V +L C + G ++ Y S D+
Sbjct: 316 VDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALG-TQIHAFALKYQPSYDVAMGNA 374
Query: 446 LIDLLGRAGKLLEAEE 461
LID+ ++G++ +A+
Sbjct: 375 LIDMYAKSGEIEDAKR 390
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 115/213 (53%), Gaps = 4/213 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+L ++ L +H + ++G IV+ ++N YAK G + A+ + M
Sbjct: 234 TLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGM 293
Query: 64 SERNLVSWSAMISGH-HQAGEHLLALEFF---SQMHLLPNEYIFASAISACAGIQSLVKG 119
+++L S +A+I+G+ H+ + AL+ F +QM++ ++ I S ++ CA + S G
Sbjct: 294 LKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALG 353
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
QIHA++LK+ + +GN+LI MY K G DA + E E N++S+ +LI+G+ ++
Sbjct: 354 TQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKH 413
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
++K M +G P+ +F L CS
Sbjct: 414 GYGHMAVSLYKKMESKGFKPNDVTFLSLLFACS 446
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/572 (34%), Positives = 325/572 (56%), Gaps = 6/572 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S+L C+ + +G +HA V++ G + DV V N ++ +Y KCG + AR +FD+M
Sbjct: 200 TFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKM 259
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
+R+ +SW+AMISG+ + G L LE FS M L P+ + SAC + + G+
Sbjct: 260 PKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGR 319
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H Y +K + + NSLI MY +G +A V+ ++VS+ A+IA V ++
Sbjct: 320 GVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHK 379
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
P K E +K+M +G+LPD + L C+ L G+ LH + +K L S+ V N
Sbjct: 380 LPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSN 439
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +YSK + A + FR I K+++SW + I + L F++M ++
Sbjct: 440 SLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMK--ESMK 497
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P+ T S+L+ACA + ++ GK+IHAH +R + D + NA+++MY +CG +
Sbjct: 498 PNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQ 557
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN ++V +WN ++ +A A++LF++M I PD +TFI LL AC+ +G+V
Sbjct: 558 FNSQ-KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMV 616
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG YFN M+ Y ++P+++H+ C++D+LGRAG+L +A ++ + P+ D + G LL+
Sbjct: 617 TEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLN 676
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ R+V +GE AK++F + Y+LL NLYA G W V+ R ++++ GL +
Sbjct: 677 ACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSAD 736
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYML 572
P S +E++G F + SHS+ EIN +L
Sbjct: 737 PGCSWVEIKGKVHAFLSGDNSHSQSKEINGVL 768
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 141/457 (30%), Positives = 251/457 (54%), Gaps = 8/457 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+LL C +A +G ++ V V + N +L+++ + G ++ A VF +MSER
Sbjct: 102 ALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSER 161
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
++ SW+ ++ G+ +AG AL + +M + PN Y F S + CAG+ + +G++IH
Sbjct: 162 DVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIH 221
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A+ ++FG+ S VGN+LI+MY+K G S+A +++ + + + +S+NA+I+G+ EN
Sbjct: 222 AHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGL 281
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+G E+F +M + PD + C + ++ R G +H VK + + + N+++
Sbjct: 282 EGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLI 341
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA-CSHCADYEKGLSVFKEMSNDHGVRPD 302
+YS + EAE F +E KD++SW IA+ SH + K + +K M + G+ PD
Sbjct: 342 QMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPF-KAVETYKMMELE-GILPD 399
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+ T S+L+ACA + + G ++H I+ L V V N+L++MY+KC + + ++F
Sbjct: 400 EITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFR 459
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+ +NVVSW ++I + AL F QMK + +KP+SVT I +L+AC G +
Sbjct: 460 NISGKNVVSWTSLILGLRINNRSFEALLFFRQMKES-MKPNSVTLISVLSACARIGALMR 518
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
G+ +T G+ D ++D+ R G+ + A
Sbjct: 519 GKEIHAHALRT-GVGFDGFLPNAILDMYVRCGRKVPA 554
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 84/183 (45%), Gaps = 2/183 (1%)
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ ++ + ++L C + G +++ + + V +GNAL++M+ + G + ++
Sbjct: 93 IEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAW 152
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+F +M R+V SWN ++ +A AL L+ +M I+P+ TF +L C
Sbjct: 153 YVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVS 212
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
+ G+ + + +G D++ LI + + G + A K P +D I +
Sbjct: 213 DIARGKEIHAHVIR-FGFESDVDVGNALITMYVKCGDISNARMLFDKMP-KRDRISWNAM 270
Query: 479 LSA 481
+S
Sbjct: 271 ISG 273
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/572 (34%), Positives = 325/572 (56%), Gaps = 6/572 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S+L C+ + +G +HA V++ G + DV V N ++ +Y KCG + AR +FD+M
Sbjct: 200 TFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKM 259
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
+R+ +SW+AMISG+ + G L LE FS M L P+ + SAC + + G+
Sbjct: 260 PKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGR 319
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H Y +K + + NSLI MY +G +A V+ ++VS+ A+IA V ++
Sbjct: 320 GVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHK 379
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
P K E +K+M +G+LPD + L C+ L G+ LH + +K L S+ V N
Sbjct: 380 LPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSN 439
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +YSK + A + FR I K+++SW + I + L F++M ++
Sbjct: 440 SLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMK--ESMK 497
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P+ T S+L+ACA + ++ GK+IHAH +R + D + NA+++MY +CG +
Sbjct: 498 PNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQ 557
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN ++V +WN ++ +A A++LF++M I PD +TFI LL AC+ +G+V
Sbjct: 558 FNSQ-KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMV 616
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG YFN M+ Y ++P+++H+ C++D+LGRAG+L +A ++ + P+ D + G LL+
Sbjct: 617 TEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLN 676
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ R+V +GE AK++F + Y+LL NLYA G W V+ R ++++ GL +
Sbjct: 677 ACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSAD 736
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYML 572
P S +E++G F + SHS+ EIN +L
Sbjct: 737 PGCSWVEIKGKVHAFLSGDNSHSQSKEINGVL 768
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 141/457 (30%), Positives = 251/457 (54%), Gaps = 8/457 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+LL C +A +G ++ V V + N +L+++ + G ++ A VF +MSER
Sbjct: 102 ALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSER 161
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
++ SW+ ++ G+ +AG AL + +M + PN Y F S + CAG+ + +G++IH
Sbjct: 162 DVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIH 221
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A+ ++FG+ S VGN+LI+MY+K G S+A +++ + + + +S+NA+I+G+ EN
Sbjct: 222 AHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGL 281
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+G E+F +M + PD + C + ++ R G +H VK + + + N+++
Sbjct: 282 EGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLI 341
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA-CSHCADYEKGLSVFKEMSNDHGVRPD 302
+YS + EAE F +E KD++SW IA+ SH + K + +K M + G+ PD
Sbjct: 342 QMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPF-KAVETYKMMELE-GILPD 399
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+ T S+L+ACA + + G ++H I+ L V V N+L++MY+KC + + ++F
Sbjct: 400 EITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFR 459
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+ +NVVSW ++I + AL F QMK + +KP+SVT I +L+AC G +
Sbjct: 460 NISGKNVVSWTSLILGLRINNRSFEALLFFRQMKES-MKPNSVTLISVLSACARIGALMR 518
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
G+ +T G+ D ++D+ R G+ + A
Sbjct: 519 GKEIHAHALRT-GVGFDGFLPNAILDMYVRCGRKVPA 554
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 84/183 (45%), Gaps = 2/183 (1%)
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ ++ + ++L C + G +++ + + V +GNAL++M+ + G + ++
Sbjct: 93 IEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAW 152
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+F +M R+V SWN ++ +A AL L+ +M I+P+ TF +L C
Sbjct: 153 YVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVS 212
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
+ G+ + + +G D++ LI + + G + A K P +D I +
Sbjct: 213 DIARGKEIHAHVIR-FGFESDVDVGNALITMYVKCGDISNARMLFDKMP-KRDRISWNAM 270
Query: 479 LSA 481
+S
Sbjct: 271 ISG 273
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/573 (36%), Positives = 321/573 (56%), Gaps = 4/573 (0%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S +++ C+ ++ L+ G +HA V++ G DV +N ++++Y+K G + +A VF ++ E
Sbjct: 206 SCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPE 265
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
++VSW+A ISG G ALE QM L+PN + +S + ACAG + G+QI
Sbjct: 266 TDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQI 325
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H + +K S +++ L+ MY K G DA V+ + +LV +NALI+G Q
Sbjct: 326 HGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQH 385
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
+ +F M ++G +R + A L+ + + +H L K S+ V N +
Sbjct: 386 AEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGL 445
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ Y K + + A + F D+I++ + I A S C E + +F EM G+ PD
Sbjct: 446 IDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRK-GLDPD 504
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
F +S+L ACA L++ + GKQ+HAHLI+ + DV GNALV YAKCG I + F+
Sbjct: 505 PFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFS 564
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+ + VVSW+ +I A H G AL +F +M I P+ +T +L ACNHAGLV E
Sbjct: 565 GLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDE 624
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
+ YFNSM++ +GI EH+ C+IDLLGRAGKL +A E P + V G LL+A
Sbjct: 625 AKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAAS 684
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
R+ RD +G A++LF L+P + +VLL+N YAS GMW DVA RK++KDS +KKEP+
Sbjct: 685 RVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPA 744
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S +E++ F V + SH + +I L L
Sbjct: 745 MSWVELKDKVHTFIVGDKSHPRARDIYAKLDEL 777
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 223/408 (54%), Gaps = 5/408 (1%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS-ERNLVSWSAMISGHH 79
G LHA + G+ D+ V+N ++ +Y G + AR VFDE ERN VSW+ ++S +
Sbjct: 119 GTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYV 178
Query: 80 QAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF 136
+ A++ F +M + PNE+ F+ ++AC G + L G+++HA ++ GY F
Sbjct: 179 KNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVF 238
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
N+L+ MY K+G A +V+G+ E ++VS+NA I+G V + + E+ M G
Sbjct: 239 TANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSG 298
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
L+P+ F+ + L+ C+ S G +H VK +S+ ++ ++ +Y+K L+ +A+
Sbjct: 299 LVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAK 358
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
K F I ++DL+ WN I+ CSH A + + LS+F M + G + T A++L + A L
Sbjct: 359 KVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKE-GFDVNRTTLAAVLKSTASL 417
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
++ +Q+HA ++ D V N L++ Y KC ++ +Y++F + +++++ ++I
Sbjct: 418 EAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMI 477
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
A + G A+KLF +M G+ PD LL AC ++G+
Sbjct: 478 TALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGK 525
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 155/520 (29%), Positives = 257/520 (49%), Gaps = 49/520 (9%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++I LL + T++L QG +HA +LK G+ + NH+L+ Y+KC AR+VFDE
Sbjct: 5 ETIGPLLTRYAATQSLLQGAHIHAHLLKSGLF--AVFRNHLLSFYSKCRLPGSARRVFDE 62
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
+ + VSWS++++ + AL F M + NE++ + CA G
Sbjct: 63 IPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-CAPDAGF--G 119
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA-FEPNLVSFNALIAGFVE 178
Q+HA ++ G FV N+L++MY G+ +A +V+ EA E N VS+N L++ +V+
Sbjct: 120 TQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVK 179
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N + +VF M+ G+ P+ F F+ + C+ S DL G +H + ++ + + F
Sbjct: 180 NDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFT 239
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N ++ +YSK I A F + E D++SWN FI+ C + L + +M + G
Sbjct: 240 ANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSS-G 298
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ P+ FT +SIL ACAG + G+QIH +++ + D + LV+MYAK GL+ +
Sbjct: 299 LVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAK 358
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN--- 415
K+F+ + R++V WN +I+ ++ AL LF +M+ G + T +L +
Sbjct: 359 KVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLE 418
Query: 416 --------HAGLVKEG------------EAYF--NSMEKTYGI-----SPDIEHFTCLID 448
HA K G ++Y+ + + Y + S DI FT +I
Sbjct: 419 AISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMIT 478
Query: 449 LLGRAGKLLEAEEYTKKF------PLGQDPIVLGTLLSAC 482
L + E+ K F L DP VL +LL+AC
Sbjct: 479 ALSQCD---HGEDAIKLFMEMLRKGLDPDPFVLSSLLNAC 515
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 191/388 (49%), Gaps = 12/388 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+L C+ + A G +H ++K D ++ ++++YAK G + A+KVFD +
Sbjct: 305 TLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWI 364
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+R+LV W+A+ISG +H AL F +M N A+ + + A ++++ +
Sbjct: 365 PQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTR 424
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HA + K G+ S S V N LI Y K + A V+ + ++++F ++I +
Sbjct: 425 QVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCD 484
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E ++F MLR+GL PD F + L C+ + +G +H +K + S+ F GN
Sbjct: 485 HGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGN 544
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ Y+K I +A+ AF + EK ++SW+ I + ++ L VF M ++H +
Sbjct: 545 ALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEH-IS 603
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRM----RLNQDVGVGNALVNMYAKCGLISC 356
P+ T S+L AC V K+ + M R + ++++ + G +
Sbjct: 604 PNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYA---CMIDLLGRAGKLDD 660
Query: 357 SYKLFNEM-LHRNVVSWNTIIAAHANHR 383
+ +L N M N W ++AA HR
Sbjct: 661 AMELVNSMPFQTNAAVWGALLAASRVHR 688
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 91/187 (48%), Gaps = 7/187 (3%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+SSLL+ C+ A +QG +HA ++K DV N ++ YAKCG + A F +
Sbjct: 508 LSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLP 567
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISAC--AGIQSLVKG 119
E+ +VSWSAMI G Q G AL+ F +M H+ PN S + AC AG+ K
Sbjct: 568 EKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAK- 626
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIAGFVE 178
+ ++ FG +I + + G DA+ LV F+ N + AL+A
Sbjct: 627 RYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRV 686
Query: 179 NQQPEKG 185
++ PE G
Sbjct: 687 HRDPELG 693
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/579 (35%), Positives = 323/579 (55%), Gaps = 6/579 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S++ C + G LH V+K G +I N ++++Y + G+++ A VF +
Sbjct: 260 TFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMI 319
Query: 64 SERNLVSWSAMISGHHQAGEHLLAL----EFFSQMHLLPNEYIFASAISACAGIQSLVKG 119
S ++L+SW++MI+G Q G + AL + F Q PNE+IF S SAC + G
Sbjct: 320 STKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFG 379
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+QIH KFG F G SL MY K G+ A+ + + P+LVS+NA+IA F ++
Sbjct: 380 RQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDS 439
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ F M+ GL+PD +F L C + +G +H +K L+ V
Sbjct: 440 GDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVC 499
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEK-DLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N+++ +Y+K + + +A F+ + E +L+SWN ++AC + +FK M
Sbjct: 500 NSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSEN 559
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+PD+ T +IL CA LAS++ G Q+H ++ L DV V N L++MYAKCG + +
Sbjct: 560 -KPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHAR 618
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+F + ++VSW+++I +A LG AL LF MK G++P+ VT++G+L+AC+H G
Sbjct: 619 DVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIG 678
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV+EG ++N+ME GI P EH +C++DLL RAG L EAE + KK D + TL
Sbjct: 679 LVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTL 738
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L++C+ +V I ER A+ + L P+ ++ VLLSN++AS G W +VA R ++K G++
Sbjct: 739 LASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASVGNWKEVARLRNLMKQMGVQ 798
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
K P S I V+ F + SH + G+I ML+ L L
Sbjct: 799 KVPGQSWIAVKDQIHVFFSEDNSHQQRGDIYTMLEDLWL 837
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 154/479 (32%), Positives = 250/479 (52%), Gaps = 10/479 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ + +L+ C+ ++L+ G +H +LK QPD+++ NH+LN+Y KCG + ARK FD
Sbjct: 157 SSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFD 216
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
M RN+VSW+ MISG+ Q G+ A+ + QM P+ F S I AC +
Sbjct: 217 TMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDL 276
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+Q+H + +K GY N+LISMY + G A V+ +L+S+ ++I GF +
Sbjct: 277 GRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQ 336
Query: 179 NQQPEKGFEVFKLMLRQGLL-PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ +F+ M RQG P+ F F C + G +H + K L N F
Sbjct: 337 LGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVF 396
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
G ++ +Y+KF + A +AF IE DL+SWN IAA S D + + F +M +
Sbjct: 397 AGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHT- 455
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G+ PD TF S+L AC ++ G QIH+++I++ L+++ V N+L+ MY KC + +
Sbjct: 456 GLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDA 515
Query: 358 YKLFNEMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ +F ++ N+VSWN I++A H+ G +LF+ M + KPD++T +L C
Sbjct: 516 FNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAE 575
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
++ G K+ G+ D+ LID+ + G L A + F Q+P ++
Sbjct: 576 LASLEVGNQVHCFSVKS-GLVVDVSVSNRLIDMYAKCGSLKHARDV---FGSTQNPDIV 630
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 189/382 (49%), Gaps = 5/382 (1%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+ + I AC I+SL G++IH + LK + N +++MY K G DA +
Sbjct: 160 YGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQ 219
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
N+VS+ +I+G+ +N Q ++ ML+ G PD +F ++ C ++ D+ G
Sbjct: 220 LRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQ 279
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
LH +K + + N ++++Y++F I A F +I KDLISW + I +
Sbjct: 280 LHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGY 339
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
+ L +F++M +P++F F S+ +AC L + G+QIH + L ++V G
Sbjct: 340 EIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGC 399
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
+L +MYAK G + + + F ++ ++VSWN IIAA ++ A+ F QM TG+ P
Sbjct: 400 SLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMP 459
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC--LIDLLGRAGKLLEAE 460
D +TF+ LL AC + +G + + K I D E C L+ + + L +A
Sbjct: 460 DGITFLSLLCACGSPVTINQGTQIHSYIIK---IGLDKEAAVCNSLLTMYTKCSNLHDAF 516
Query: 461 EYTKKFPLGQDPIVLGTLLSAC 482
K + + +LSAC
Sbjct: 517 NVFKDVSENANLVSWNAILSAC 538
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 101/194 (52%), Gaps = 1/194 (0%)
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHA 327
+S N++I Y + L F + ++ + T+ +++ AC + S+++GK+IH
Sbjct: 122 LSTNSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHD 181
Query: 328 HLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGS 387
H+++ D+ + N ++NMY KCG + + K F+ M RNVVSW +I+ ++ +
Sbjct: 182 HILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQEND 241
Query: 388 ALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLI 447
A+ ++ QM +G PD +TF ++ AC AG + G + K+ G + LI
Sbjct: 242 AIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKS-GYDHHLIAQNALI 300
Query: 448 DLLGRAGKLLEAEE 461
+ R G+++ A +
Sbjct: 301 SMYTRFGQIVHASD 314
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/567 (37%), Positives = 322/567 (56%), Gaps = 9/567 (1%)
Query: 16 KALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMI 75
+ L G +H V K+G Q DV V+ ++++Y++ G + +AR +FD+M R++ SW+AMI
Sbjct: 186 QTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMI 245
Query: 76 SGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYA 132
SG Q G AL+ +M L + AS + CA + + IH Y +K G
Sbjct: 246 SGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLE 305
Query: 133 SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP--EKGFEVFK 190
FV N+LI+MY K G DA V+ + F ++VS+N++IA + +N P +GF FK
Sbjct: 306 FELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGF-FFK 364
Query: 191 LMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK-CKLESNPFVGNTIMALYSKF 249
+ L GL PD + I + S D + +H ++ L +GN +M +Y+K
Sbjct: 365 MQL-NGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKL 423
Query: 250 NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
+I A K F LI KD++SWNT I+ + + + V++ M ++ + T+ SI
Sbjct: 424 GVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSI 483
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
LAA A + ++Q G +IH HLI+ L+ DV VG L+++Y KCG + + LF ++ +
Sbjct: 484 LAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESS 543
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNS 429
V WN II+ H H G ALKLF +M+ G+KPD VTFI LL+AC+H+GLV EG+ +F+
Sbjct: 544 VPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHL 603
Query: 430 MEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVV 489
M++ YGI P ++H+ C++DLLGRAG L A ++ K PL D + G LL ACR+ ++
Sbjct: 604 MQE-YGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIE 662
Query: 490 IGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQ 549
+G+ + +LF + YVLLSN+YA+ G W V R + ++ GLKK P +S IEV
Sbjct: 663 LGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVN 722
Query: 550 GTFEKFTVAEFSHSKIGEINYMLKTLS 576
+ F SH K EI L+ L+
Sbjct: 723 RRVDIFYTGNQSHPKCKEIYAELRILT 749
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 140/462 (30%), Positives = 254/462 (54%), Gaps = 14/462 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+SL C+KT ++ LHA ++ G +S ++NLYA G + L+R FD++
Sbjct: 78 DFNSLFDSCTKTLLAKR---LHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQI 134
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP----NEYIFASAISACAGIQSLVKG 119
+++ +W++MIS + + G A++ F Q+ L+ + Y F + AC Q+LV G
Sbjct: 135 QRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKAC---QTLVDG 191
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
++IH + K G+ FV SLI MY + G+ A ++ + ++ S+NA+I+G ++N
Sbjct: 192 RKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQN 251
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ +V M +G+ D + A L +C+ D+ ++H +K LE FV
Sbjct: 252 GNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVS 311
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N ++ +Y+KF +G+A+K F+ + +D++SWN+ IAA D F +M + G+
Sbjct: 312 NALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLN-GL 370
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKCGLISCSY 358
PD T S+ + A ++ + +H ++R L + V +GNA+++MYAK G+I ++
Sbjct: 371 EPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAH 430
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTACNHA 417
K+FN + ++VVSWNT+I+ + + L A++++ M + IK + T++ +L A H
Sbjct: 431 KVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHV 490
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
G +++G + KT + D+ TCLIDL G+ G+L++A
Sbjct: 491 GALQQGMRIHGHLIKT-NLHLDVFVGTCLIDLYGKCGRLVDA 531
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 205/412 (49%), Gaps = 35/412 (8%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++S+L C++ + +H V+K G++ ++ VSN ++N+YAK G + A+KVF +M
Sbjct: 275 TVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQM 334
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
R++VSW+++I+ + Q + + A FF +M L P+ S S A + +
Sbjct: 335 FLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSR 394
Query: 121 QIHAYSLKFGY-ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+H + ++ G+ +GN+++ MY K+G A V+ ++VS+N LI+G+ +N
Sbjct: 395 SVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQN 454
Query: 180 QQPEKGFEVFKLM-------LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
+ EV+++M L QG ++ L + L++GM +H +K L
Sbjct: 455 GLASEAIEVYRMMEECREIKLNQG------TWVSILAAYAHVGALQQGMRIHGHLIKTNL 508
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
+ FVG ++ LY K + +A F + + + WN I+ EK L +F+E
Sbjct: 509 HLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFRE 568
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNAL------VN 346
M D GV+PD TF S+L+AC+ V GK L Q+ G+ +L V+
Sbjct: 569 M-QDEGVKPDHVTFISLLSACSHSGLVDEGKWF------FHLMQEYGIKPSLKHYGCMVD 621
Query: 347 MYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGG-SALKLFE 393
+ + G + +Y +M LH + W ++ A H N LG ++ +LFE
Sbjct: 622 LLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFE 673
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/567 (35%), Positives = 321/567 (56%), Gaps = 5/567 (0%)
Query: 13 SKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWS 72
++T L++G +H L+ I D++V+ ++ +YAKCG+ A+++F + R+LV+WS
Sbjct: 340 AETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWS 399
Query: 73 AMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKF 129
A+I+ Q G AL F +M + PN S + ACA + L G+ IH +++K
Sbjct: 400 AIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKA 459
Query: 130 GYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVF 189
S G +L+SMY K G+ + AL + ++V++N+LI G+ + P ++F
Sbjct: 460 DMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMF 519
Query: 190 KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF 249
+ + PD + G + C++ NDL +G +H L VK ES+ V N ++ +Y+K
Sbjct: 520 YKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKC 579
Query: 250 NLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
+ AE F + KD ++WN IAA ++ +S F +M ++ P+ TF S
Sbjct: 580 GSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLEN-FHPNSVTFVS 638
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
+L A A LA+ + G HA +I+M + VGN+L++MYAKCG + S KLFNEM H++
Sbjct: 639 VLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKD 698
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
VSWN +++ +A H G A+ LF M+ + ++ DSV+F+ +L+AC HAGLV+EG F+
Sbjct: 699 TVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFH 758
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDV 488
SM Y I PD+EH+ C++DLLGRAG E + K P+ D V G LL +CR+ +V
Sbjct: 759 SMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNV 818
Query: 489 VIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEV 548
+GE L L+P + +V+LS++YA G W D AR + D GLKK P S +E+
Sbjct: 819 KLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVEL 878
Query: 549 QGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ F V + SH ++ ++ + TL
Sbjct: 879 KNKVHAFRVGDKSHPQLESMHLLWNTL 905
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 143/484 (29%), Positives = 256/484 (52%), Gaps = 13/484 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + +L C+ LQ+G+ H + + G++ DV + ++++Y+K G + AR+VFD+M
Sbjct: 131 TFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKM 190
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVK---GQ 120
+R++V+W+AMI+G Q+ + A++FF M L+ E S ++ GI L +
Sbjct: 191 PKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCR 250
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IH Y + ++S V N LI +Y K G A V+ + + + VS+ ++AG+ N
Sbjct: 251 SIHGYVFRRDFSSA--VSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNG 308
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ E+F M + ++ S + + DL KG +H ++ +++S+ V
Sbjct: 309 CFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVAT 368
Query: 241 TIMALYSKFNLIGEAEKAFRL---IEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+M +Y+K GE EKA +L ++ +DL++W+ IAA E+ LS+F+EM N
Sbjct: 369 PLMVMYAK---CGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQN-Q 424
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
++P+ T SIL ACA L+ ++ GK IH ++ ++ D+ G ALV+MYAKCG + +
Sbjct: 425 KMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAA 484
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
FN M R++V+WN++I +A +A+ +F +++ + I PD+ T +G++ AC
Sbjct: 485 LTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALL 544
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
+ +G + K G D LID+ + G L AE K +D +
Sbjct: 545 NDLDQGTCIHGLIVK-LGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNV 603
Query: 478 LLSA 481
+++A
Sbjct: 604 IIAA 607
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 134/443 (30%), Positives = 229/443 (51%), Gaps = 8/443 (1%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
S+H V + VSN +++LY+KCG + +AR+VFD+M +++ VSW M++G+ G
Sbjct: 251 SIHGYVFRRDFSS--AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNG 308
Query: 83 EHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
+ LE F +M L N+ SA A A L KG++IH +L+ S V
Sbjct: 309 CFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVAT 368
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
L+ MY K G + A ++ +LV+++A+IA V+ PE+ +F+ M Q + P
Sbjct: 369 PLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKP 428
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
+R + L C+ + L+ G +HC TVK ++S+ G ++++Y+K A F
Sbjct: 429 NRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTF 488
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+ +D+++WN+ I + D + +F ++ + PD T ++ ACA L +
Sbjct: 489 NRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLS-AINPDAGTMVGVVPACALLNDL 547
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAA 378
G IH ++++ D V NAL++MYAKCG + + LFN+ ++ V+WN IIAA
Sbjct: 548 DQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISP 438
+ + A+ F QM+ P+SVTF+ +L A + +EG A F++ G
Sbjct: 608 YMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMA-FHACIIQMGFLS 666
Query: 439 DIEHFTCLIDLLGRAGKLLEAEE 461
+ LID+ + G+L +E+
Sbjct: 667 NTLVGNSLIDMYAKCGQLDYSEK 689
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/452 (28%), Positives = 226/452 (50%), Gaps = 22/452 (4%)
Query: 13 SKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWS 72
S K L + +HA ++ G + ++ H++NLY+ K LAR VFD + + W+
Sbjct: 40 SSCKHLNPLLQIHAQIIVSGFKHHHSIT-HLINLYSLFHKCDLARSVFDSTPNPSRILWN 98
Query: 73 AMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKF 129
+MI + ++ ++ ALE + M L P++Y F + AC G +L +G H +
Sbjct: 99 SMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRR 158
Query: 130 GYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVF 189
G F+G L+ MY K+G A V+ + + ++V++NA+IAG +++ P + + F
Sbjct: 159 GLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFF 218
Query: 190 KLMLRQGLLPDRFS----FAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF---VGNTI 242
+ M G+ P S F G IC +SN I C ++ + F V N +
Sbjct: 219 RSMQLVGVEPSSVSLLNLFPG---ICKLSN------IELCRSIHGYVFRRDFSSAVSNGL 269
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ LYSK + A + F + ++D +SW T +A +H + + L +F +M + VR +
Sbjct: 270 IDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGN-VRIN 328
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+ S A A ++ GK+IH ++ R++ D+ V L+ MYAKCG + +LF
Sbjct: 329 KVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFW 388
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+ R++V+W+ IIAA AL LF++M+ +KP+ VT + +L AC L+K
Sbjct: 389 GLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKL 448
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
G++ + + D+ T L+ + + G
Sbjct: 449 GKS-IHCFTVKADMDSDLSTGTALVSMYAKCG 479
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 188/360 (52%), Gaps = 10/360 (2%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+ +S+C + L+ QIHA + G+ + + LI++Y A V+
Sbjct: 35 YPRLLSSCKHLNPLL---QIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTP 90
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
P+ + +N++I + ++Q + E++ M+ +GL PD+++F L+ C+ + +L++G+
Sbjct: 91 NPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVW 150
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
H + LE + F+G ++ +YSK + A + F + ++D+++WN IA S D
Sbjct: 151 FHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSED 210
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
+ + F+ M GV P + ++ L++++ + IH ++ R + V N
Sbjct: 211 PCEAVDFFRSMQL-VGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS--AVSN 267
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
L+++Y+KCG + + ++F++M+ ++ VSW T++A +A++ L+LF++MK ++
Sbjct: 268 GLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRI 327
Query: 403 DSVTFI-GLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ V+ + L A L K E + ++++ I DI T L+ + + G+ +A++
Sbjct: 328 NKVSAVSAFLAAAETIDLEKGKEIHGCALQQR--IDSDILVATPLMVMYAKCGETEKAKQ 385
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 117/242 (48%), Gaps = 11/242 (4%)
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ LYS F+ A F I WN+ I A + Y + L ++ M + G+ P
Sbjct: 69 LINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMV-EKGLEP 127
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D +TF +L AC G ++Q G H + R L +DV +G LV+MY+K G + + ++F
Sbjct: 128 DKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVF 187
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGL---LTACNHAG 418
++M R+VV+WN +IA + A+ F M+ G++P SV+ + L + ++
Sbjct: 188 DKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIE 247
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
L + Y + + +S LIDL + G + A + + QD + GT+
Sbjct: 248 LCRSIHGYVFRRDFSSAVS------NGLIDLYSKCGDVDVARRVFDQM-VDQDDVSWGTM 300
Query: 479 LS 480
++
Sbjct: 301 MA 302
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 76/127 (59%), Gaps = 4/127 (3%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L + A ++G++ HA +++MG + +V N ++++YAKCG++ + K+F+EM +
Sbjct: 638 SVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHK 697
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQI- 122
+ VSW+AM+SG+ G A+ FS M + + F S +SAC + +G++I
Sbjct: 698 DTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIF 757
Query: 123 HAYSLKF 129
H+ S K+
Sbjct: 758 HSMSDKY 764
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/578 (34%), Positives = 331/578 (57%), Gaps = 8/578 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+++ S+L C++ QG +H +LK G ++I SN+++++Y KC + ++A KVFD
Sbjct: 7 QNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDS 66
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
M ERN+VSWSA++SGH G+ +L FS+M + PNE+ F++ + AC + +L KG
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
QIH + LK G+ + VGNSL+ MY K G ++A V+ + +L+S+NA+IAGFV
Sbjct: 127 LQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHA 186
Query: 180 QQPEKGFEVFKLMLRQGL--LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE--SN 235
K + F +M + PD F+ L+ CS + + G +H V+ S+
Sbjct: 187 GYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS 246
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
+ +++ LY K + A KAF I+EK +ISW++ I + ++ + + +FK +
Sbjct: 247 ATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL-Q 305
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
+ + D F +SI+ A A ++ GKQ+ A +++ + V N++V+MY KCGL+
Sbjct: 306 ELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVD 365
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ K F EM ++V+SW +I + H LG ++++F +M I+PD V ++ +L+AC+
Sbjct: 366 EAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACS 425
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
H+G++KEGE F+ + +T+GI P +EH+ C++DLLGRAG+L EA+ P+ + +
Sbjct: 426 HSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIW 485
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
TLLS CR+ D+ +G+ + K L + + YV++SNLY G W + AR++
Sbjct: 486 QTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIK 545
Query: 536 GLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLK 573
GLKKE S +E++ F E SH I LK
Sbjct: 546 GLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLK 583
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/578 (34%), Positives = 324/578 (56%), Gaps = 16/578 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF-DEMSE 65
+ L C+ + L +G LH+ ++ G P ++N+Y+KCG+M A VF D E
Sbjct: 16 AFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHE 75
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQI 122
RN+ +++A+ISG G +F+ +M L +P++Y F + C + + ++I
Sbjct: 76 RNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV---KKI 132
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H LK G FVG++L++ Y+K G DA V+GE ++V +NA+I G+ +
Sbjct: 133 HGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCL 192
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
++ EVF+ M +G+ P RF+ G L + + DL G +H + +K +S V N +
Sbjct: 193 DEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNAL 252
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y K IG+A F +I EKD+ SWN+ I+ C D++ L +F +M G+ PD
Sbjct: 253 IDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGS-GILPD 311
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD--------VGVGNALVNMYAKCGLI 354
T ++L AC+ LA++ HG++IH ++I L +D + V NA+++MYAKCG +
Sbjct: 312 LVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSM 371
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ + K+F+ M ++V SWN +I + H AL +F QM KP+ VT +G+L+AC
Sbjct: 372 NNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSAC 431
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
NHAG V G + ME T+G+ P IEH+TC+ID+LGRAG L +A E +K P+ +P+V
Sbjct: 432 NHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVV 491
Query: 475 LGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKD 534
LL ACRL + + E A+Q+ L+P YVL+SN+Y G + +V RK +K+
Sbjct: 492 WRALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTMKE 551
Query: 535 SGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYML 572
+KK P S IE++ F + +HS++ + L
Sbjct: 552 QNVKKTPGCSWIELKDGVHVFRTGDRTHSELNALTNQL 589
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 183/336 (54%), Gaps = 5/336 (1%)
Query: 90 FFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
S + +L N + + +CA Q+L KG+Q+H+ + +G++ SLI+MY K G
Sbjct: 1 MLSAIQMLNNVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCG 60
Query: 150 YSSDALLV-YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGL 208
+A+LV Y E N+ ++NA+I+GFV N KGF+ +K M +G++PD+++F +
Sbjct: 61 QMGEAILVFYDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVV 120
Query: 209 EICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLI 268
C +++K +H +K LE + FVG+ ++ Y K + +A+K F + +D++
Sbjct: 121 RTCCEVMEVKK---IHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVV 177
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
WN I + ++ L VF+ M + GV P FT IL+ A + +GK +H
Sbjct: 178 LWNAMINGYAKIGCLDEALEVFRRM-HVKGVAPSRFTITGILSVFASRGDLDNGKTVHGI 236
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
+++M + V V NAL++MY KC I + +F + +++ SWN+II+ H
Sbjct: 237 VMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGT 296
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
L+LF++M +GI PD VT +L AC+H + G
Sbjct: 297 LRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGR 332
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 140/292 (47%), Gaps = 23/292 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I+ +L + L G ++H V+KMG V VSN ++++Y KC + A +F+ +
Sbjct: 213 TITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMI 272
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+E+++ SW+++IS H Q G+H L F +M +LP+ + + AC+ + +L+ G+
Sbjct: 273 NEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGR 332
Query: 121 QIHAYSLKFGYASIS--------FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
+IH Y + G V N+++ MY K G ++AL ++ + ++ S+N +
Sbjct: 333 EIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIM 392
Query: 173 IAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
I G+ + + +F M P+ + G L C+ G + H ++
Sbjct: 393 IMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACN-----HAGFVSHGRLFLAQM 447
Query: 233 ESNPFVGNTIMALYSKFNLIGEA---EKAFRLIE----EKDLISWNTFIAAC 277
ES V TI +++G A E A+ +++ + + + W + AC
Sbjct: 448 ESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRALLGAC 499
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/578 (34%), Positives = 323/578 (55%), Gaps = 14/578 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C + Q G +H VLK G+ DV V N ++ +Y +C + AR VFD+M ER
Sbjct: 99 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIH 123
++VSWS MI + E +ALE +M+ + P+E S ++ A ++ G+ +H
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218
Query: 124 AYSLK------FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
AY ++ G + + +L+ MY K G+ A ++ + +VS+ A+IAG +
Sbjct: 219 AYVIRNSNNEHMGVPTTT----ALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCI 274
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ + E+G ++F M + + P+ + + C + L+ G LH ++ +
Sbjct: 275 RSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLA 334
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+ ++ +Y K + I A F + +D++ W ++A + ++ ++F +M
Sbjct: 335 LATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTS- 393
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
GVRP T S+L+ CA ++ GK +H+++ + R+ D + ALV+MYAKCG I+ +
Sbjct: 394 GVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAA 453
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+LF E + R++ WN II A H G AL +F +M+ G+KP+ +TFIGLL AC+HA
Sbjct: 454 GRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHA 513
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV EG+ F M T+G+ P IEH+ C++DLLGRAG L EA E K P+ + IV G
Sbjct: 514 GLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGA 573
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
L++ACRL ++ +GE A QL ++P VL+SN+YA+ W D AG RK +K G+
Sbjct: 574 LVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGM 633
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KKEP +S+IEV GT +F + + SH +I IN ML +
Sbjct: 634 KKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEM 671
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 183/358 (51%), Gaps = 4/358 (1%)
Query: 101 YIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGE 160
++ S + AC + G++IH + LK G FVGN+L+ MY + A LV+ +
Sbjct: 95 FMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDK 154
Query: 161 AFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKG 220
E ++VS++ +I N++ + E+ + M + P + + + + + ++R G
Sbjct: 155 MMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMG 214
Query: 221 MILHCLTVKCKLESNPFVGNT--IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
+H ++ + V T ++ +Y+K +G A + F + +K ++SW IA C
Sbjct: 215 KAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCI 274
Query: 279 HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
E+G +F M ++ + P++ T S++ C ++Q GKQ+HA+++R + +
Sbjct: 275 RSNRLEEGTKLFIRMQEEN-IFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSL 333
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
+ ALV+MY KC I + LF+ +R+V+ W +++A+A A LF+QM+ +
Sbjct: 334 ALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTS 393
Query: 399 GIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
G++P VT + LL+ C AG + G+ + ++K + D T L+D+ + G +
Sbjct: 394 GVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKER-VEVDCILNTALVDMYAKCGDI 450
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/485 (22%), Positives = 217/485 (44%), Gaps = 53/485 (10%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYA--------------- 48
S S+++ S+ K + L + M ++P + ++NL+A
Sbjct: 162 SWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYV 221
Query: 49 ----------------------KCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLL 86
KCG + LAR++F+ ++++ +VSW+AMI+G ++
Sbjct: 222 IRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEE 281
Query: 87 ALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLIS 143
+ F +M ++ PNE S I C +L G+Q+HAY L+ G++ + +L+
Sbjct: 282 GTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVD 341
Query: 144 MYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFS 203
MY K +A ++ +++ + A+++ + + ++ F +F M G+ P + +
Sbjct: 342 MYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVT 401
Query: 204 FAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIE 263
L +C+V+ L G +H K ++E + + ++ +Y+K I A + F
Sbjct: 402 IVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAI 461
Query: 264 EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGK 323
+D+ WN I + E+ L +F EM GV+P+D TF +L AC+ V GK
Sbjct: 462 SRDICMWNAIITGFAMHGYGEEALDIFAEMER-QGVKPNDITFIGLLHACSHAGLVTEGK 520
Query: 324 QIHAHLIR-MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAA--- 378
++ ++ L + +V++ + GL+ ++++ M + N + W ++AA
Sbjct: 521 KLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRL 580
Query: 379 HANHRLGG-SALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
H N +LG +A +L E I+P++ + L++ A A KT G+
Sbjct: 581 HKNPQLGELAATQLLE------IEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMK 634
Query: 438 PDIEH 442
+ H
Sbjct: 635 KEPGH 639
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+F S+L AC ++ Q GK+IH +++ L++DV VGNAL+ MY +C + + +F+
Sbjct: 94 NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+M+ R+VVSW+T+I + + ++ AL+L +M ++P V + ++ ++
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM 213
Query: 423 GEAYF-----NSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
G+A NS + G+ T L+D+ + G L
Sbjct: 214 GKAMHAYVIRNSNNEHMGVPTT----TALLDMYAKCGHL 248
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/546 (36%), Positives = 322/546 (58%), Gaps = 5/546 (0%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G +H ++K G+ D++V + ++ +Y KC A +F+EM E+++ W+ +IS ++Q
Sbjct: 125 GKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQ 184
Query: 81 AGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
+G ALE+F M PN +AIS+CA + L +G +IH + G+ SF+
Sbjct: 185 SGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFI 244
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
++L+ MY K G+ A+ ++ + + +V++N++I+G+ ++FK M +G+
Sbjct: 245 SSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGV 304
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
P + + + +CS S L +G +H T++ +++ + FV +++M LY K + AEK
Sbjct: 305 KPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEK 364
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F+LI + ++SWN I+ + L +F EM + V D TF S+L AC+ LA
Sbjct: 365 IFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSY-VESDAITFTSVLTACSQLA 423
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
+++ GK+IH +I +L+ + V AL++MYAKCG + ++ +F + R++VSW ++I
Sbjct: 424 ALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMIT 483
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
A+ +H AL+LF +M + +KPD V F+ +L+AC HAGLV EG YFN M YGI
Sbjct: 484 AYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGII 543
Query: 438 PDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI-VLGTLLSACRLRRDVVIGERLAK 496
P +EH++CLIDLLGRAG+L EA E ++ P +D + +L TL SACRL R++ +G +A+
Sbjct: 544 PRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIAR 603
Query: 497 QLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFT 556
L P +S Y+LLSN+YAS W +V R +K+ GLKK P S IE+ F
Sbjct: 604 TLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFF 663
Query: 557 VAEFSH 562
V + SH
Sbjct: 664 VEDNSH 669
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 250/486 (51%), Gaps = 10/486 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ + LL C +K+L+QG +H V+ +G+Q D+ + ++N Y C A+ VFD
Sbjct: 3 TRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFD 62
Query: 62 EMSERNLVS-WSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSL 116
M +S W+ +++G+ + ++ ALE F ++ +L P+ Y + S AC G+
Sbjct: 63 NMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRY 122
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
V G+ IH +K G VG+SL+ MY K A+ ++ E E ++ +N +I+ +
Sbjct: 123 VLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCY 182
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
++ + E F LM R G P+ + + C+ DL +GM +H + +
Sbjct: 183 YQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDS 242
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
F+ + ++ +Y K + A + F + +K +++WN+ I+ D + +FK M N+
Sbjct: 243 FISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNE 302
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
GV+P T +S++ C+ A + GK +H + IR R+ DV V ++L+++Y KCG +
Sbjct: 303 -GVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVEL 361
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ K+F + VVSWN +I+ + AL LF +M+ + ++ D++TF +LTAC+
Sbjct: 362 AEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQ 421
Query: 417 AGLVKEGEAYFN-SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
+++G+ N +EK + + L+D+ + G + EA K P +D +
Sbjct: 422 LAALEKGKEIHNLIIEKKLDNNEVV--MGALLDMYAKCGAVDEAFSVFKCLP-KRDLVSW 478
Query: 476 GTLLSA 481
++++A
Sbjct: 479 TSMITA 484
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 155/307 (50%), Gaps = 13/307 (4%)
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDL 267
L C S L++G ++H V L+++ F+ T++ Y +L A+ F +E
Sbjct: 10 LRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNMENPCE 69
Query: 268 IS-WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
IS WN +A + Y + L +F+++ + ++PD +T+ S+ AC GL GK IH
Sbjct: 70 ISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMIH 129
Query: 327 AHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGG 386
LI+ L D+ VG++LV MY KC + LFNEM ++V WNT+I+ +
Sbjct: 130 TCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFK 189
Query: 387 SALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG----EAYFNSMEKTYGISPDIEH 442
AL+ F M+ G +P+SVT +++C + G E NS G D
Sbjct: 190 DALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINS-----GFLLDSFI 244
Query: 443 FTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH-- 500
+ L+D+ G+ G L A E ++ P + + +++S L+ D++ +L K++++
Sbjct: 245 SSALVDMYGKCGHLEMAIEIFEQMP-KKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEG 303
Query: 501 LQPTTTS 507
++PT T+
Sbjct: 304 VKPTLTT 310
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +S+L CS+ AL++G +H +++ + + +V +L++YAKCG + A VF
Sbjct: 409 AITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFK 468
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
+ +R+LVSW++MI+ + G ALE F++M ++ P+ F + +SAC
Sbjct: 469 CLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACG 521
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/575 (36%), Positives = 338/575 (58%), Gaps = 10/575 (1%)
Query: 12 CSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKC-GKMILARKVFDEMSERNLV 69
CS + + G S+ V+K G +Q DV V +++++ K G ++ A KVF++M ERN V
Sbjct: 178 CSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAV 237
Query: 70 SWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYS 126
+W+ MI+ Q G A++ F +M L P+ + + ISACA ++ L+ GQQ+H+ +
Sbjct: 238 TWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQA 297
Query: 127 LKFGYASISFVGNSLISMYMKV---GYSSDALLVYGEAFEPNLVSFNALIAGFVENQ-QP 182
++ G VG LI+MY K G A ++ + + N+ S+ A+I G+V+
Sbjct: 298 IRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYD 357
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E+ ++F+ M+ ++P+ F+F+ L+ C+ LR G + VK S V N++
Sbjct: 358 EEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSL 417
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+++Y++ I +A KAF ++ EK+LIS+NT I A + + E+ L +F E+ D G+
Sbjct: 418 ISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIE-DQGMGAS 476
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
FTFAS+L+ A + ++ G+QIHA +I+ L + V NAL++MY++CG I ++++F
Sbjct: 477 AFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFE 536
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+M RNV+SW +II A H AL+LF +M G++P+ VT+I +L+AC+H GLV E
Sbjct: 537 DMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNE 596
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G +F SM +G+ P +EH+ C++D+LGR+G L EA ++ P D +V T L AC
Sbjct: 597 GWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGAC 656
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
R+ ++ +G+ AK + +P + Y+LLSNLYAS W +V+ RK +K+ L KE
Sbjct: 657 RVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAG 716
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
S +EV+ KF V + SH K EI L+ LS+
Sbjct: 717 CSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSV 751
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/467 (30%), Positives = 238/467 (50%), Gaps = 12/467 (2%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++ S L C +T++ G +H + + +Q D + N +++LY+KCG+ A +F
Sbjct: 67 QTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQL 126
Query: 63 M-SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
M S R+L+SWSAM+S AL F M PNEY FA+A AC+ + +
Sbjct: 127 MGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSV 186
Query: 119 GQQIHAYSLKFGY-ASISFVGNSLISMYMK-VGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G I + +K GY S VG LI M++K G A V+ + E N V++ +I
Sbjct: 187 GDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRL 246
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
++ + ++F M+ G PDRF+ +G + C+ L G LH ++ L +
Sbjct: 247 MQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDR 306
Query: 237 FVGNTIMALYSKFNLIGE---AEKAFRLIEEKDLISWNTFIAACSHCADY-EKGLSVFKE 292
VG ++ +Y+K ++ G A K F I + ++ SW I Y E+ L +F+
Sbjct: 307 CVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRG 366
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
M H V P+ FTF+S L ACA LA+++ G+Q+ H +++ + V N+L++MYA+ G
Sbjct: 367 MILTH-VIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSG 425
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
I + K F+ + +N++S+NT+I A+A + AL+LF +++ G+ + TF LL+
Sbjct: 426 RIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLS 485
Query: 413 ACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
G + +GE + K+ G+ + LI + R G + A
Sbjct: 486 GAASIGTIGKGEQIHARVIKS-GLKLNQSVCNALISMYSRCGNIESA 531
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 118/212 (55%), Gaps = 3/212 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS L C+ AL+ G + +K+G V+N ++++YA+ G++ ARK FD +
Sbjct: 378 TFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDIL 437
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
E+NL+S++ +I + + ALE F+++ + + + FAS +S A I ++ KG+
Sbjct: 438 FEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGE 497
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIHA +K G V N+LISMY + G A V+ + + N++S+ ++I GF ++
Sbjct: 498 QIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHG 557
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
+ E+F ML +G+ P+ ++ L CS
Sbjct: 558 FATQALELFHKMLEEGVRPNLVTYIAVLSACS 589
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 145/295 (49%), Gaps = 8/295 (2%)
Query: 164 PNLVSFNALIAGFVE---NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKG 220
P + N L ++ N + K + M+ QG PD +++ L+ C + G
Sbjct: 26 PTFTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIG 85
Query: 221 MILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLI-EEKDLISWNTFIAACSH 279
++H + L+ + N++++LYSK +A F+L+ +DLISW+ ++ ++
Sbjct: 86 TLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFAN 145
Query: 280 CADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM-RLNQDV 338
+ L F +M ++G P+++ FA+ AC+ V G I +++ L DV
Sbjct: 146 NNMGFRALLTFVDMI-ENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDV 204
Query: 339 GVGNALVNMYAKC-GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA 397
VG L++M+ K G + ++K+F +M RN V+W +I G A+ LF +M
Sbjct: 205 CVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMIL 264
Query: 398 TGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
+G +PD T G+++AC + L+ G+ +S +G++ D CLI++ +
Sbjct: 265 SGYEPDRFTLSGVISACANMELLLLGQQ-LHSQAIRHGLTLDRCVGCCLINMYAK 318
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 5/186 (2%)
Query: 285 KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNAL 344
K +S + M + G PD T++ L C S G +H L + L D N+L
Sbjct: 49 KAISTLEHMVH-QGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSL 107
Query: 345 VNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPD 403
+++Y+KCG + +F M R+++SW+ +++ AN+ +G AL F M G P+
Sbjct: 108 ISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPN 167
Query: 404 SVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLL--GRAGKLLEAEE 461
F AC+ A V G++ F + KT + D+ LID+ GR G L+ A +
Sbjct: 168 EYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGR-GDLVSAFK 226
Query: 462 YTKKFP 467
+K P
Sbjct: 227 VFEKMP 232
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +SLL + + +G +HA V+K G++ + V N ++++Y++CG + A +VF+
Sbjct: 477 AFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFE 536
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
+M +RN++SW+++I+G + G ALE F +M + PN + + +SAC+ + + +
Sbjct: 537 DMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNE 596
Query: 119 GQQ 121
G +
Sbjct: 597 GWK 599
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/577 (34%), Positives = 328/577 (56%), Gaps = 5/577 (0%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++ +SLL C+ L G ++HA + GI + + + + N+YAKC + AR+VFD
Sbjct: 60 RTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDR 119
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL----LPNEYIFASAISACAGIQSLVK 118
M R+ V+W+A+++G+ + G +A+E +M P+ S + ACA ++L
Sbjct: 120 MPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAA 179
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
++ HA++++ G + V +++ Y K G A +V+ N VS+NA+I G+ +
Sbjct: 180 CREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQ 239
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N + +F M+ +G+ S L+ C L +GM +H L V+ L+SN V
Sbjct: 240 NGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSV 299
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N ++ +YSK + A F ++ + +SWN I C+ E + +F M ++
Sbjct: 300 MNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLEN- 358
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
V+PD FT S++ A A ++ + IH + IR+ L+QDV V AL++MYAKCG ++ +
Sbjct: 359 VKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIAR 418
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
LFN R+V++WN +I + +H G +A++LFE+MK+ GI P+ TF+ +L+AC+HAG
Sbjct: 419 ILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAG 478
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV EG YF SM++ YG+ P +EH+ ++DLLGRAGKL EA + +K P+ V G +
Sbjct: 479 LVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAM 538
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L AC+L ++V + E A+++F L P +VLL+N+YA+ MW DVA R ++ +GL+
Sbjct: 539 LGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQ 598
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
K P +S+I+++ F +H + EI L L
Sbjct: 599 KTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKL 635
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 133/298 (44%), Gaps = 5/298 (1%)
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
F M G P +F L++C+ DL G +H ++S + +Y+K
Sbjct: 47 FVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAK 106
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
+A + F + +D ++WN +A + + + M + G RPD T S
Sbjct: 107 CRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVS 166
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
+L ACA ++ ++ HA IR L + V V A+++ Y KCG I + +F+ M +N
Sbjct: 167 VLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKN 226
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
VSWN +I +A + AL LF +M G+ V+ + L AC G + EG
Sbjct: 227 SVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHE 286
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEA----EEYTKKFPLGQDPIVLGTLLSAC 482
+ + G+ ++ LI + + ++ A +E ++ + + ++LG + C
Sbjct: 287 LLVRI-GLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGC 343
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/577 (34%), Positives = 328/577 (56%), Gaps = 5/577 (0%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++ +SLL C+ L G ++HA + GI + + + + N+YAKC + AR+VFD
Sbjct: 60 RTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDR 119
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL----LPNEYIFASAISACAGIQSLVK 118
M R+ V+W+A+++G+ + G +A+E +M P+ S + ACA ++L
Sbjct: 120 MPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAA 179
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
++ HA++++ G + V +++ Y K G A +V+ N VS+NA+I G+ +
Sbjct: 180 CREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQ 239
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N + +F M+ +G+ S L+ C L +GM +H L V+ L+SN V
Sbjct: 240 NGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSV 299
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N ++ +YSK + A F ++ + +SWN I C+ E + +F M ++
Sbjct: 300 MNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLEN- 358
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
V+PD FT S++ A A ++ + IH + IR+ L+QDV V AL++MYAKCG ++ +
Sbjct: 359 VKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIAR 418
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
LFN R+V++WN +I + +H G +A++LFE+MK+ GI P+ TF+ +L+AC+HAG
Sbjct: 419 ILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAG 478
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV EG YF SM++ YG+ P +EH+ ++DLLGRAGKL EA + +K P+ V G +
Sbjct: 479 LVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAM 538
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L AC+L ++V + E A+++F L P +VLL+N+YA+ MW DVA R ++ +GL+
Sbjct: 539 LGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQ 598
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
K P +S+I+++ F +H + EI L L
Sbjct: 599 KTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKL 635
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 133/298 (44%), Gaps = 5/298 (1%)
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
F M G P +F L++C+ DL G +H ++S + +Y+K
Sbjct: 47 FVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAK 106
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
+A + F + +D ++WN +A + + + M + G RPD T S
Sbjct: 107 CRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVS 166
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
+L ACA ++ ++ HA IR L + V V A+++ Y KCG I + +F+ M +N
Sbjct: 167 VLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKN 226
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
VSWN +I +A + AL LF +M G+ V+ + L AC G + EG
Sbjct: 227 SVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHE 286
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEA----EEYTKKFPLGQDPIVLGTLLSAC 482
+ + G+ ++ LI + + ++ A +E ++ + + ++LG + C
Sbjct: 287 LLVRI-GLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGC 343
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/608 (32%), Positives = 333/608 (54%), Gaps = 38/608 (6%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C+ L++ +H V G++ DV V+ ++ +Y+KCG++ LA ++F +M ER
Sbjct: 184 SILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKER 243
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
N+VSW+A+I + Q + A E + +M + PN F S +++C ++L +G++IH
Sbjct: 244 NVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIH 303
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN--QQ 181
++ + G + V N+LI+MY K DA + + +++S++A+IAG+ ++ Q
Sbjct: 304 SHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQD 363
Query: 182 PEKGFEVFKL---MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
E EVF+L M R+G+ P++ +F L+ CSV L +G +H K ES+ +
Sbjct: 364 KESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSL 423
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH- 297
I +Y+K I EAE+ F +E K++++W + + C D VF EMS +
Sbjct: 424 QTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNV 483
Query: 298 -----------------------------GVRPDDFTFASILAACAGLASVQHGKQIHAH 328
G +PD T SIL AC L++++ GK +HA
Sbjct: 484 VSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAE 543
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
+++ L D V +L+ MY+KCG ++ + +F+++ +R+ V+WN ++A + H +G A
Sbjct: 544 AVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEA 603
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID 448
+ LF++M + P+ +TF +++AC AGLV+EG F M++ + + P +H+ C++D
Sbjct: 604 VDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVD 663
Query: 449 LLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSP 508
LLGRAG+L EAEE+ ++ P D V LL AC+ +V + E A + L+P+ S
Sbjct: 664 LLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASV 723
Query: 509 YVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
YV LSN+YA G W D RK++ D GLKK+ S IE+ G F + +H +I I
Sbjct: 724 YVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSI 783
Query: 569 NYMLKTLS 576
+ L+ L+
Sbjct: 784 HAELEMLT 791
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 149/511 (29%), Positives = 250/511 (48%), Gaps = 40/511 (7%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
++ HC+K + + G +H + ++G+ D+ + N ++N Y+K G + +VF M+ R+
Sbjct: 84 IIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRD 143
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
+V+WS+MI+ + A + F +M ++ PN F S + AC L K ++IH
Sbjct: 144 VVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHT 203
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
G + V +LI+MY K G S A ++ + E N+VS+ A+I ++++ +
Sbjct: 204 VVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNE 263
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
FE+++ ML+ G+ P+ +F L C+ L +G +H + LE++ V N ++
Sbjct: 264 AFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALIT 323
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIA--ACSHCADYEKGLSVFK--EMSNDHGVR 300
+Y K N I +A + F + ++D+ISW+ IA A S D E VF+ E GV
Sbjct: 324 MYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVF 383
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI------ 354
P+ TF SIL AC+ +++ G+QIHA + ++ D + A+ NMYAKCG I
Sbjct: 384 PNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQV 443
Query: 355 -------------------------SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
+ + K+F+EM RNVVSWN +IA +A
Sbjct: 444 FSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVF 503
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
+L MK G +PD VT I +L AC ++ G+ K G+ D T LI +
Sbjct: 504 ELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVK-LGLESDTVVATSLIGM 562
Query: 450 LGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+ G++ EA K +D + +L+
Sbjct: 563 YSKCGEVTEARTVFDKIS-NRDTVAWNAMLA 592
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 213/425 (50%), Gaps = 48/425 (11%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + SLL+ C+ +AL +G +H+ + + G++ DV+V+N ++ +Y KC + AR+ FD
Sbjct: 280 AVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFD 339
Query: 62 EMSERNLVSWSAMISGHHQAG--------EHLLALEFFSQMHLLPNEYIFASAISACAGI 113
MS+R+++SWSAMI+G+ Q+G E LE + + PN+ F S + AC+
Sbjct: 340 RMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVH 399
Query: 114 QSLVKGQQIHAYSLKFGYAS------------------------ISFVGN-------SLI 142
+L +G+QIHA K G+ S S + N SL+
Sbjct: 400 GALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLL 459
Query: 143 SMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRF 202
+MY+K G + A V+ E N+VS+N +IAG+ ++ K FE+ M +G PDR
Sbjct: 460 TMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRV 519
Query: 203 SFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLI 262
+ LE C + L +G ++H VK LES+ V +++ +YSK + EA F I
Sbjct: 520 TIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKI 579
Query: 263 EEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG 322
+D ++WN +A + + +FK M + V P++ TF ++++AC VQ G
Sbjct: 580 SNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKER-VPPNEITFTAVISACGRAGLVQEG 638
Query: 323 KQIHAHL---IRMRL-NQDVGVGNALVNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIA 377
++I + RM+ Q G +V++ + G + + + M ++ W+ ++
Sbjct: 639 REIFRIMQEDFRMKPGKQHYG---CMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLG 695
Query: 378 AHANH 382
A +H
Sbjct: 696 ACKSH 700
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 206/415 (49%), Gaps = 10/415 (2%)
Query: 71 WSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFG 130
W +G + LL + Q LL N + I CA ++ G+ +H + G
Sbjct: 51 WRLCKAGRLKEAIQLLGI--IKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELG 108
Query: 131 YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFK 190
A ++GNSLI+ Y K G + V+ ++V+++++IA + N P K F+ F+
Sbjct: 109 LAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFE 168
Query: 191 LMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN 250
M + P+R +F L+ C+ + L K +H + +E++ V ++ +YSK
Sbjct: 169 RMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCG 228
Query: 251 LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
I A + F+ ++E++++SW I A + + ++++M G+ P+ TF S+L
Sbjct: 229 EISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQ-AGISPNAVTFVSLL 287
Query: 311 AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVV 370
+C ++ G++IH+H+ L DV V NAL+ MY KC I + + F+ M R+V+
Sbjct: 288 NSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVI 347
Query: 371 SWNTIIAAHA-----NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
SW+ +IA +A + +L E+M+ G+ P+ VTF+ +L AC+ G +++G
Sbjct: 348 SWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQ 407
Query: 426 YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+ K G D T + ++ + G + EAE+ K ++ + +LL+
Sbjct: 408 IHAEISKV-GFESDRSLQTAIFNMYAKCGSIYEAEQVFSKME-NKNVVAWASLLT 460
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/580 (35%), Positives = 340/580 (58%), Gaps = 10/580 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAK-CGKMILARKVFDEM 63
++++ CS G ++ V+K G ++ DV V +++++ K G + A KVFD+M
Sbjct: 132 AAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKM 191
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
ERNLV+W+ MI+ Q G A++ F M L +P+ + ++S +SAC + L G+
Sbjct: 192 PERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGK 251
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKV---GYSSDALLVYGEAFEPNLVSFNALIAGFV 177
Q+H+ ++ G A VG SL+ MY K G D+ V+ + E N++S+ A+I +V
Sbjct: 252 QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYV 311
Query: 178 ENQQPEK-GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
++ + +K E+F M+ + P+ FSF+ L+ C +D G ++ VK + S
Sbjct: 312 QSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVN 371
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
VGN+++++Y++ + +A KAF ++ EK+L+S+N + + E+ +F E++ D
Sbjct: 372 CVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIA-D 430
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
G+ FTFAS+L+ A + ++ G+QIH L++ + + NAL++MY++CG I
Sbjct: 431 TGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEA 490
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
++++FNEM RNV+SW ++I A H AL++F +M TG KP+ +T++ +L+AC+H
Sbjct: 491 AFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSH 550
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
G++ EG+ +FNSM K +GI P +EH+ C++DLLGR+G L+EA E+ PL D +V
Sbjct: 551 VGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWR 610
Query: 477 TLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSG 536
TLL ACR+ + +G A+ + +P + Y+LLSNL+AS G W DV RK +K+
Sbjct: 611 TLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERN 670
Query: 537 LKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
L KE S IEV+ +F V E SH + +I L L+
Sbjct: 671 LIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLA 710
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 132/431 (30%), Positives = 229/431 (53%), Gaps = 11/431 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S LL C + + Q G +H +++ G++ D +V N +++LY+KCG AR +F+ M
Sbjct: 28 TYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGM 87
Query: 64 -SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKG 119
++R+LVSWSAM+S A+ F M L PNEY FA+ I AC+ G
Sbjct: 88 GNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVG 147
Query: 120 QQIHAYSLKFGYASISF-VGNSLISMYMK-VGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+ I+ + +K GY VG LI M++K G A V+ + E NLV++ +I F
Sbjct: 148 EIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFA 207
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ ++F M G +PDRF+++ L C+ L G LH ++ L +
Sbjct: 208 QLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVC 267
Query: 238 VGNTIMALYSKFNLIG---EAEKAFRLIEEKDLISWNTFIAACSHCADYEK-GLSVFKEM 293
VG +++ +Y+K G ++ K F + E +++SW I A + +K + +F +M
Sbjct: 268 VGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM 327
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
+ H +RP+ F+F+S+L AC L+ G+Q++++ +++ + VGN+L++MYA+ G
Sbjct: 328 ISGH-IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGR 386
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ + K F+ + +N+VS+N I+ +A + A LF ++ TGI + TF LL+
Sbjct: 387 MEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSG 446
Query: 414 CNHAGLVKEGE 424
G + +GE
Sbjct: 447 AASIGAMGKGE 457
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 198/386 (51%), Gaps = 17/386 (4%)
Query: 87 ALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYM 146
L+ +Q + P+ ++ + +C ++ G+ +H ++ G S V N+LIS+Y
Sbjct: 13 TLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYS 72
Query: 147 KVGYSSDALLVY-GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA 205
K G + A L++ G + +LVS++A+++ F N + F ML G P+ + FA
Sbjct: 73 KCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFA 132
Query: 206 GGLEICSVSNDLRKGMILHCLTVKCK-LESNPFVGNTIMALYSKFN-LIGEAEKAFRLIE 263
+ CS +N G I++ VK LE++ VG ++ ++ K + +G A K F +
Sbjct: 133 AVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMP 192
Query: 264 EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGK 323
E++L++W I + + +F +M G PD FT++S+L+AC L + GK
Sbjct: 193 ERNLVTWTLMITRFAQLGCARDAIDLFLDMELS-GYVPDRFTYSSVLSACTELGLLALGK 251
Query: 324 QIHAHLIRMRLNQDVGVGNALVNMYAKC---GLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
Q+H+ +IR+ L DV VG +LV+MYAKC G + S K+F +M NV+SW II A+
Sbjct: 252 QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYV 311
Query: 381 NH-RLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
A++LF +M + I+P+ +F +L AC + GE + +Y +
Sbjct: 312 QSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY-----SYAVKLG 366
Query: 440 IEHFTC----LIDLLGRAGKLLEAEE 461
I C LI + R+G++ +A +
Sbjct: 367 IASVNCVGNSLISMYARSGRMEDARK 392
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 115/212 (54%), Gaps = 3/212 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S SS+L C G +++ +K+GI V N ++++YA+ G+M ARK FD +
Sbjct: 338 SFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL 397
Query: 64 SERNLVSWSAMISGHH---QAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
E+NLVS++A++ G+ ++ E L + + + + FAS +S A I ++ KG+
Sbjct: 398 FEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGE 457
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH LK GY S + N+LISMY + G A V+ E + N++S+ ++I GF ++
Sbjct: 458 QIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHG 517
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
+ E+F ML G P+ ++ L CS
Sbjct: 518 FATRALEMFHKMLETGTKPNEITYVAVLSACS 549
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 148/289 (51%), Gaps = 13/289 (4%)
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
F LM +Q PD +++ L+ C + + G ++H ++ LE + V NT+++
Sbjct: 10 AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 69
Query: 245 LYSKFNLIGEAEKAFRLIEE-----KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
LYSK G+ E A RLI E +DL+SW+ ++ ++ + + + F +M + G
Sbjct: 70 LYSK---CGDTETA-RLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDML-ELGF 124
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAK-CGLISCS 357
P+++ FA+++ AC+ G+ I+ +++ L DV VG L++M+ K G + +
Sbjct: 125 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 184
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
YK+F++M RN+V+W +I A A+ LF M+ +G PD T+ +L+AC
Sbjct: 185 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTEL 244
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
GL+ G+ +S G++ D+ L+D+ + ++ K F
Sbjct: 245 GLLALGKQ-LHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVF 292
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +SLL + A+ +G +H +LK G + + + N ++++Y++CG + A +VF+
Sbjct: 437 AFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFN 496
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
EM +RN++SW++MI+G + G ALE F +M PNE + + +SAC+ + + +
Sbjct: 497 EMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISE 556
Query: 119 GQQ 121
GQ+
Sbjct: 557 GQK 559
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 4/181 (2%)
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD T++ +L +C + Q GK +H L++ L D V N L+++Y+KCG + +
Sbjct: 24 PDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLI 83
Query: 361 FNEMLH-RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
F M + R++VSW+ +++ AN+ + A+ F M G P+ F ++ AC++A
Sbjct: 84 FEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANY 143
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR-AGKLLEAEEYTKKFPLGQDPIVLGTL 478
GE + + KT + D+ LID+ + +G L A + K P + +V TL
Sbjct: 144 AWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMP--ERNLVTWTL 201
Query: 479 L 479
+
Sbjct: 202 M 202
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/580 (35%), Positives = 340/580 (58%), Gaps = 10/580 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAK-CGKMILARKVFDEM 63
++++ CS G ++ V+K G ++ DV V +++++ K G + A KVFD+M
Sbjct: 150 AAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKM 209
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
ERNLV+W+ MI+ Q G A++ F M L +P+ + ++S +SAC + L G+
Sbjct: 210 PERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGK 269
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKV---GYSSDALLVYGEAFEPNLVSFNALIAGFV 177
Q+H+ ++ G A VG SL+ MY K G D+ V+ + E N++S+ A+I +V
Sbjct: 270 QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYV 329
Query: 178 ENQQPEK-GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
++ + +K E+F M+ + P+ FSF+ L+ C +D G ++ VK + S
Sbjct: 330 QSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVN 389
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
VGN+++++Y++ + +A KAF ++ EK+L+S+N + + E+ +F E++ D
Sbjct: 390 CVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIA-D 448
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
G+ FTFAS+L+ A + ++ G+QIH L++ + + NAL++MY++CG I
Sbjct: 449 TGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEA 508
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
++++FNEM RNV+SW ++I A H AL++F +M TG KP+ +T++ +L+AC+H
Sbjct: 509 AFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSH 568
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
G++ EG+ +FNSM K +GI P +EH+ C++DLLGR+G L+EA E+ PL D +V
Sbjct: 569 VGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWR 628
Query: 477 TLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSG 536
TLL ACR+ + +G A+ + +P + Y+LLSNL+AS G W DV RK +K+
Sbjct: 629 TLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERN 688
Query: 537 LKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
L KE S IEV+ +F V E SH + +I L L+
Sbjct: 689 LIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLA 728
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 132/431 (30%), Positives = 229/431 (53%), Gaps = 11/431 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S LL C + + Q G +H +++ G++ D +V N +++LY+KCG AR +F+ M
Sbjct: 46 TYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGM 105
Query: 64 -SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKG 119
++R+LVSWSAM+S A+ F M L PNEY FA+ I AC+ G
Sbjct: 106 GNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVG 165
Query: 120 QQIHAYSLKFGYASISF-VGNSLISMYMK-VGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+ I+ + +K GY VG LI M++K G A V+ + E NLV++ +I F
Sbjct: 166 EIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFA 225
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ ++F M G +PDRF+++ L C+ L G LH ++ L +
Sbjct: 226 QLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVC 285
Query: 238 VGNTIMALYSKFNLIG---EAEKAFRLIEEKDLISWNTFIAACSHCADYEK-GLSVFKEM 293
VG +++ +Y+K G ++ K F + E +++SW I A + +K + +F +M
Sbjct: 286 VGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM 345
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
+ H +RP+ F+F+S+L AC L+ G+Q++++ +++ + VGN+L++MYA+ G
Sbjct: 346 ISGH-IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGR 404
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ + K F+ + +N+VS+N I+ +A + A LF ++ TGI + TF LL+
Sbjct: 405 MEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSG 464
Query: 414 CNHAGLVKEGE 424
G + +GE
Sbjct: 465 AASIGAMGKGE 475
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 198/386 (51%), Gaps = 17/386 (4%)
Query: 87 ALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYM 146
L+ +Q + P+ ++ + +C ++ G+ +H ++ G S V N+LIS+Y
Sbjct: 31 TLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYS 90
Query: 147 KVGYSSDALLVY-GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA 205
K G + A L++ G + +LVS++A+++ F N + F ML G P+ + FA
Sbjct: 91 KCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFA 150
Query: 206 GGLEICSVSNDLRKGMILHCLTVKCK-LESNPFVGNTIMALYSKFN-LIGEAEKAFRLIE 263
+ CS +N G I++ VK LE++ VG ++ ++ K + +G A K F +
Sbjct: 151 AVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMP 210
Query: 264 EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGK 323
E++L++W I + + +F +M G PD FT++S+L+AC L + GK
Sbjct: 211 ERNLVTWTLMITRFAQLGCARDAIDLFLDMELS-GYVPDRFTYSSVLSACTELGLLALGK 269
Query: 324 QIHAHLIRMRLNQDVGVGNALVNMYAKC---GLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
Q+H+ +IR+ L DV VG +LV+MYAKC G + S K+F +M NV+SW II A+
Sbjct: 270 QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYV 329
Query: 381 NH-RLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
A++LF +M + I+P+ +F +L AC + GE + +Y +
Sbjct: 330 QSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY-----SYAVKLG 384
Query: 440 IEHFTC----LIDLLGRAGKLLEAEE 461
I C LI + R+G++ +A +
Sbjct: 385 IASVNCVGNSLISMYARSGRMEDARK 410
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 115/212 (54%), Gaps = 3/212 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S SS+L C G +++ +K+GI V N ++++YA+ G+M ARK FD +
Sbjct: 356 SFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL 415
Query: 64 SERNLVSWSAMISGHH---QAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
E+NLVS++A++ G+ ++ E L + + + + FAS +S A I ++ KG+
Sbjct: 416 FEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGE 475
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH LK GY S + N+LISMY + G A V+ E + N++S+ ++I GF ++
Sbjct: 476 QIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHG 535
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
+ E+F ML G P+ ++ L CS
Sbjct: 536 FATRALEMFHKMLETGTKPNEITYVAVLSACS 567
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 148/289 (51%), Gaps = 13/289 (4%)
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
F LM +Q PD +++ L+ C + + G ++H ++ LE + V NT+++
Sbjct: 28 AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 87
Query: 245 LYSKFNLIGEAEKAFRLIEE-----KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
LYSK G+ E A RLI E +DL+SW+ ++ ++ + + + F +M + G
Sbjct: 88 LYSK---CGDTETA-RLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDML-ELGF 142
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAK-CGLISCS 357
P+++ FA+++ AC+ G+ I+ +++ L DV VG L++M+ K G + +
Sbjct: 143 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 202
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
YK+F++M RN+V+W +I A A+ LF M+ +G PD T+ +L+AC
Sbjct: 203 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTEL 262
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
GL+ G+ +S G++ D+ L+D+ + ++ K F
Sbjct: 263 GLLALGKQ-LHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVF 310
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +SLL + A+ +G +H +LK G + + + N ++++Y++CG + A +VF+
Sbjct: 455 AFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFN 514
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
EM +RN++SW++MI+G + G ALE F +M PNE + + +SAC+ + + +
Sbjct: 515 EMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISE 574
Query: 119 GQQ 121
GQ+
Sbjct: 575 GQK 577
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 4/181 (2%)
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD T++ +L +C + Q GK +H L++ L D V N L+++Y+KCG + +
Sbjct: 42 PDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLI 101
Query: 361 FNEMLH-RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
F M + R++VSW+ +++ AN+ + A+ F M G P+ F ++ AC++A
Sbjct: 102 FEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANY 161
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR-AGKLLEAEEYTKKFPLGQDPIVLGTL 478
GE + + KT + D+ LID+ + +G L A + K P + +V TL
Sbjct: 162 AWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMP--ERNLVTWTL 219
Query: 479 L 479
+
Sbjct: 220 M 220
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/556 (35%), Positives = 320/556 (57%), Gaps = 4/556 (0%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
LH +K G+ V VS+ ++++Y K GK+ +VF +M++RN+VSW+A+I+G AG
Sbjct: 179 LHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGY 238
Query: 84 HLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
++ AL +FS+M + + + FA A+ A A L G+ IH ++K G+ SFV N+
Sbjct: 239 NMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINT 298
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
L +MY K G + + ++ + P++VS+ LI +V+ + E E FK M + + P+
Sbjct: 299 LATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPN 358
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+++FA + C+ + G +H ++ L V N+I+ LYSK L+ A F
Sbjct: 359 KYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFH 418
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
I KD+ISW+T IA S ++ M + G +P++F +S+L+ C +A ++
Sbjct: 419 GITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRRE-GPKPNEFALSSVLSVCGSMALLE 477
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
GKQ+HAH++ + ++ + V +AL++MY+KCG + + K+FN M N++SW +I +A
Sbjct: 478 QGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYA 537
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
H A+ LFE++ + G+KPD VTFIG+LTAC+HAG+V G YF M Y ISP
Sbjct: 538 EHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPSK 597
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH 500
EH+ C+IDLL RAG+L EAE + P D +V TLL +CR+ DV G A+QL
Sbjct: 598 EHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLLR 657
Query: 501 LQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEF 560
L P + ++ L+N+YA+ G W + A RK++K G+ KE +S + V F +
Sbjct: 658 LDPNSAGTHIALANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDKLNAFVAGDQ 717
Query: 561 SHSKIGEINYMLKTLS 576
+H + I +L+ LS
Sbjct: 718 AHPQSEHITTVLELLS 733
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 226/428 (52%), Gaps = 12/428 (2%)
Query: 41 NHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP-- 98
N L K G++ +R +FD+M+ R+ +SW+ +I+G+ A + AL FS M + P
Sbjct: 94 NSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGL 153
Query: 99 --NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALL 156
++++ + A+ AC ++ G+ +H +S+K G + FV ++LI MYMKVG
Sbjct: 154 QRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCR 213
Query: 157 VYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSND 216
V+ + + N+VS+ A+IAG V + F M + D +FA L+ + S+
Sbjct: 214 VFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSL 273
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE---KDLISWNTF 273
L G +H T+K + + FV NT+ +Y+K G+A+ RL E+ D++SW T
Sbjct: 274 LHHGKAIHTQTIKQGFDESSFVINTLATMYNK---CGKADYVMRLFEKMKMPDVVSWTTL 330
Query: 274 IAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR 333
I + E + FK M + V P+ +TFA++++ACA LA + G+QIH H++R+
Sbjct: 331 ITTYVQKGEEEHAVEAFKRMRKSN-VSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLG 389
Query: 334 LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFE 393
L + V N++V +Y+K GL+ + +F+ + ++++SW+TIIA ++ A
Sbjct: 390 LVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLS 449
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 453
M+ G KP+ +L+ C L+++G+ ++ GI + + LI + +
Sbjct: 450 WMRREGPKPNEFALSSVLSVCGSMALLEQGKQ-VHAHVLCIGIDHEAMVHSALISMYSKC 508
Query: 454 GKLLEAEE 461
G + EA +
Sbjct: 509 GSVEEASK 516
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+L C L+QG +HA VL +GI + +V + ++++Y+KCG + A K+F+ M
Sbjct: 462 ALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGM 521
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFF---SQMHLLPNEYIFASAISACA 111
N++SW+AMI+G+ + G A+ F S + L P+ F ++AC+
Sbjct: 522 KINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACS 572
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/575 (34%), Positives = 327/575 (56%), Gaps = 5/575 (0%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+LL + L +G +H ++ G+ D+ V ++ + +CG + A++ F +++R
Sbjct: 234 NLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADR 293
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
++V ++A+I+ Q G ++ A E + +M + N + S ++AC+ ++L G+ IH
Sbjct: 294 DVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIH 353
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
++ + G++S +GN+LISMY + G A ++ + +L+S+NA+IAG+ +
Sbjct: 354 SHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRG 413
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ ++K M +G+ P R +F L C+ S+ G ++H ++ ++SN + N +M
Sbjct: 414 EAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALM 473
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y + + EA+ F + +D+ISWN+ IA + YE +F+EM N+ + PD+
Sbjct: 474 NMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEE-LEPDN 532
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
TFAS+L+ C +++ GKQIH + L DV +GNAL+NMY +CG + + +F+
Sbjct: 533 ITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHS 592
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP-DSVTFIGLLTACNHAGLVKE 422
+ HR+V+SW +I A+ A++LF QM+ G +P D TF +L+ACNHAGLV E
Sbjct: 593 LQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLE 652
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G F+SME YG+ P IEH+ CL+ LLGRA + EAE + P D V TLL AC
Sbjct: 653 GYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGAC 712
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
R+ ++ + E A L + Y+LLSN+YA+ G W DVA R++++ G++KEP
Sbjct: 713 RIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPG 772
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
S IEV +F A+ SH + EI LK LS+
Sbjct: 773 RSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSV 807
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 142/457 (31%), Positives = 262/457 (57%), Gaps = 5/457 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+LL +C++ + L + +HA +++ G+ PD+ +SN ++N+Y KC ++ A +VF EM R
Sbjct: 32 ALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRR 91
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
+++SW+++IS + Q G A + F +M +PN+ + S ++AC L G++IH
Sbjct: 92 DVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIH 151
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ +K GY V NSL+SMY K G A V+ ++VS+N ++ + + +
Sbjct: 152 SQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVK 211
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ +F M +G+ PD+ ++ L+ + + L +G +H LTV+ L S+ VG ++
Sbjct: 212 ECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALV 271
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+ + + A++AF+ I ++D++ +N IAA + + + M +D GV +
Sbjct: 272 TMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSD-GVALNR 330
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T+ SIL AC+ +++ GK IH+H+ + DV +GNAL++MYA+CG + + +LF
Sbjct: 331 TTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYT 390
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M R+++SWN IIA +A G A++L++QM++ G+KP VTF+ LL+AC ++ +G
Sbjct: 391 MPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADG 450
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
+ + ++ GI + L+++ R G L+EA+
Sbjct: 451 KMIHEDILRS-GIKSNGHLANALMNMYRRCGSLMEAQ 486
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 206/396 (52%), Gaps = 3/396 (0%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+ + + C + L + ++IHA ++ G F+ N LI+MY+K DA V+ E
Sbjct: 30 YVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMP 89
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
+++S+N+LI+ + + +K F++F+ M G +P++ ++ L C +L G
Sbjct: 90 RRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKK 149
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
+H +K + +P V N+++++Y K + A + F I +D++S+NT + + A
Sbjct: 150 IHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAY 209
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
++ L +F +MS++ G+ PD T+ ++L A + + GK+IH + LN D+ VG
Sbjct: 210 VKECLGLFGQMSSE-GISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGT 268
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
ALV M +CG + + + F + R+VV +N +IAA A H A + + +M++ G+
Sbjct: 269 ALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVAL 328
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
+ T++ +L AC+ + ++ G+ + + + G S D++ LI + R G L +A E
Sbjct: 329 NRTTYLSILNACSTSKALEAGKLIHSHISED-GHSSDVQIGNALISMYARCGDLPKAREL 387
Query: 463 TKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQL 498
P +D I +++ R D RL KQ+
Sbjct: 388 FYTMP-KRDLISWNAIIAGYARREDRGEAMRLYKQM 422
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 152/282 (53%), Gaps = 3/282 (1%)
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
DR ++ L+ C+ L + +H V+ + + F+ N ++ +Y K + +A + F
Sbjct: 26 DRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVF 85
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+ + +D+ISWN+ I+ + +K +F+EM N G P+ T+ SIL AC A +
Sbjct: 86 KEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQN-AGFIPNKITYISILTACYSPAEL 144
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
++GK+IH+ +I+ +D V N+L++MY KCG + + ++F + R+VVS+NT++ +
Sbjct: 145 ENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLY 204
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
A L LF QM + GI PD VT+I LL A ++ EG+ + + G++ D
Sbjct: 205 AQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKR-IHKLTVEEGLNSD 263
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
I T L+ + R G + A++ K +D +V L++A
Sbjct: 264 IRVGTALVTMCVRCGDVDSAKQAFKGIA-DRDVVVYNALIAA 304
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 97/175 (55%), Gaps = 6/175 (3%)
Query: 291 KEMSNDHGVRP---DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNM 347
+++SN H RP D T+ ++L C + K+IHA ++ + D+ + N L+NM
Sbjct: 12 EDVSNTHQPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINM 71
Query: 348 YAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTF 407
Y KC + ++++F EM R+V+SWN++I+ +A A +LFE+M+ G P+ +T+
Sbjct: 72 YVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITY 131
Query: 408 IGLLTACNHAGLVKEGEAYFNSMEKT-YGISPDIEHFTCLIDLLGRAGKLLEAEE 461
I +LTAC ++ G+ + + K Y P +++ L+ + G+ G L A +
Sbjct: 132 ISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQ 184
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L C +AL+ G +H + + G+Q DV + N ++N+Y +CG + AR VF +
Sbjct: 534 TFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSL 593
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKG 119
R+++SW+AMI G GE + A+E F QM P+ F S +SAC +++G
Sbjct: 594 QHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEG 653
Query: 120 QQI 122
QI
Sbjct: 654 YQI 656
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/567 (35%), Positives = 320/567 (56%), Gaps = 5/567 (0%)
Query: 13 SKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWS 72
++T L++G +H L+ I D++V+ ++ +YAKCG+ A+++F + R+LV+WS
Sbjct: 340 AETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWS 399
Query: 73 AMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKF 129
A+I+ Q G AL F +M + PN S + ACA + L G+ IH +++K
Sbjct: 400 AIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKA 459
Query: 130 GYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVF 189
S G +L+SMY K G+ + AL + ++V++N+LI G+ + P ++F
Sbjct: 460 DMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMF 519
Query: 190 KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF 249
+ + PD + G + C++ NDL +G +H L VK ES+ V N ++ +Y+K
Sbjct: 520 YKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKC 579
Query: 250 NLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
+ AE F + KD ++WN IAA ++ +S F +M ++ P+ TF S
Sbjct: 580 GSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLEN-FHPNSVTFVS 638
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
+L A A LA+ + G HA +I+M + VGN+L++MYAKCG + S KLFNEM H++
Sbjct: 639 VLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKD 698
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
VSWN +++ +A H G A+ LF M+ + ++ DSV+F+ +L+AC H GLV+EG F+
Sbjct: 699 TVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFH 758
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDV 488
SM Y I PD+EH+ C++DLLGRAG E + K P+ D V G LL +CR+ +V
Sbjct: 759 SMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNV 818
Query: 489 VIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEV 548
+GE L L+P + +V+LS++YA G W D AR + D GLKK P S +E+
Sbjct: 819 KLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVEL 878
Query: 549 QGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ F V + SH ++ ++ + TL
Sbjct: 879 KNKVHAFRVGDKSHPQLESMHLLWNTL 905
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 143/484 (29%), Positives = 256/484 (52%), Gaps = 13/484 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + +L C+ LQ+G+ H + + G++ DV + ++++Y+K G + AR+VFD+M
Sbjct: 131 TFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKM 190
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVK---GQ 120
+R++V+W+AMI+G Q+ + A++FF M L+ E S ++ GI L +
Sbjct: 191 PKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCR 250
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IH Y + ++S V N LI +Y K G A V+ + + + VS+ ++AG+ N
Sbjct: 251 SIHGYVFRRDFSSA--VSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNG 308
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ E+F M + ++ S + + DL KG +H ++ +++S+ V
Sbjct: 309 CFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVAT 368
Query: 241 TIMALYSKFNLIGEAEKAFRL---IEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+M +Y+K GE EKA +L ++ +DL++W+ IAA E+ LS+F+EM N
Sbjct: 369 PLMVMYAK---CGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQN-Q 424
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
++P+ T SIL ACA L+ ++ GK IH ++ ++ D+ G ALV+MYAKCG + +
Sbjct: 425 KMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAA 484
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
FN M R++V+WN++I +A +A+ +F +++ + I PD+ T +G++ AC
Sbjct: 485 LTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALL 544
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
+ +G + K G D LID+ + G L AE K +D +
Sbjct: 545 NDLDQGTCIHGLIVK-LGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNV 603
Query: 478 LLSA 481
+++A
Sbjct: 604 IIAA 607
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/443 (30%), Positives = 229/443 (51%), Gaps = 8/443 (1%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
S+H V + VSN +++LY+KCG + +AR+VFD+M +++ VSW M++G+ G
Sbjct: 251 SIHGYVFRRDFSS--AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNG 308
Query: 83 EHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
+ LE F +M L N+ SA A A L KG++IH +L+ S V
Sbjct: 309 CFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVAT 368
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
L+ MY K G + A ++ +LV+++A+IA V+ PE+ +F+ M Q + P
Sbjct: 369 PLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKP 428
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
+R + L C+ + L+ G +HC TVK ++S+ G ++++Y+K A F
Sbjct: 429 NRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTF 488
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+ +D+++WN+ I + D + +F ++ + PD T ++ ACA L +
Sbjct: 489 NRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLS-AINPDAGTMVGVVPACALLNDL 547
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAA 378
G IH ++++ D V NAL++MYAKCG + + LFN+ ++ V+WN IIAA
Sbjct: 548 DQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISP 438
+ + A+ F QM+ P+SVTF+ +L A + +EG A F++ G
Sbjct: 608 YMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMA-FHACIIQMGFLS 666
Query: 439 DIEHFTCLIDLLGRAGKLLEAEE 461
+ LID+ + G+L +E+
Sbjct: 667 NTLVGNSLIDMYAKCGQLXYSEK 689
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/452 (28%), Positives = 226/452 (50%), Gaps = 22/452 (4%)
Query: 13 SKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWS 72
S K L + +HA ++ G + ++ H++NLY+ K LAR VFD + + W+
Sbjct: 40 SSCKHLNPLLQIHAQIIVSGFKHHHSIT-HLINLYSLFHKCDLARSVFDSTPNPSRILWN 98
Query: 73 AMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKF 129
+MI + ++ ++ ALE + M L P++Y F + AC G +L +G H +
Sbjct: 99 SMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRR 158
Query: 130 GYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVF 189
G F+G L+ MY K+G A V+ + + ++V++NA+IAG +++ P + + F
Sbjct: 159 GLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFF 218
Query: 190 KLMLRQGLLPDRFS----FAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF---VGNTI 242
+ M G+ P S F G IC +SN I C ++ + F V N +
Sbjct: 219 RSMQLVGVEPSSVSLLNLFPG---ICKLSN------IELCRSIHGYVFRRDFSSAVSNGL 269
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ LYSK + A + F + ++D +SW T +A +H + + L +F +M + VR +
Sbjct: 270 IDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGN-VRIN 328
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+ S A A ++ GK+IH ++ R++ D+ V L+ MYAKCG + +LF
Sbjct: 329 KVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFW 388
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+ R++V+W+ IIAA AL LF++M+ +KP+ VT + +L AC L+K
Sbjct: 389 GLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKL 448
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
G++ + + D+ T L+ + + G
Sbjct: 449 GKS-IHCFTVKADMDSDLSTGTALVSMYAKCG 479
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 188/360 (52%), Gaps = 10/360 (2%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+ +S+C + L+ QIHA + G+ + + LI++Y A V+
Sbjct: 35 YPRLLSSCKHLNPLL---QIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTP 90
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
P+ + +N++I + ++Q + E++ M+ +GL PD+++F L+ C+ + +L++G+
Sbjct: 91 NPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVW 150
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
H + LE + F+G ++ +YSK + A + F + ++D+++WN IA S D
Sbjct: 151 FHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSED 210
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
+ + F+ M GV P + ++ L++++ + IH ++ R + V N
Sbjct: 211 PCEAVDFFRSMQL-VGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS--AVSN 267
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
L+++Y+KCG + + ++F++M+ ++ VSW T++A +A++ L+LF++MK ++
Sbjct: 268 GLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRI 327
Query: 403 DSVTFI-GLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ V+ + L A L K E + ++++ I DI T L+ + + G+ +A++
Sbjct: 328 NKVSAVSAFLAAAETIDLEKGKEIHGCALQQR--IDSDILVATPLMVMYAKCGETEKAKQ 385
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 117/242 (48%), Gaps = 11/242 (4%)
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ LYS F+ A F I WN+ I A + Y + L ++ M + G+ P
Sbjct: 69 LINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMV-EKGLEP 127
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D +TF +L AC G ++Q G H + R L +DV +G LV+MY+K G + + ++F
Sbjct: 128 DKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVF 187
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGL---LTACNHAG 418
++M R+VV+WN +IA + A+ F M+ G++P SV+ + L + ++
Sbjct: 188 DKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIE 247
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
L + Y + + +S LIDL + G + A + + QD + GT+
Sbjct: 248 LCRSIHGYVFRRDFSSAVS------NGLIDLYSKCGDVDVARRVFDQM-VDQDDVSWGTM 300
Query: 479 LS 480
++
Sbjct: 301 MA 302
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 76/127 (59%), Gaps = 4/127 (3%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L + A ++G++ HA +++MG + +V N ++++YAKCG++ + K+F+EM +
Sbjct: 638 SVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHK 697
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQI- 122
+ VSW+AM+SG+ G A+ FS M + + F S +SAC + +G++I
Sbjct: 698 DTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIF 757
Query: 123 HAYSLKF 129
H+ S K+
Sbjct: 758 HSMSDKY 764
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/553 (35%), Positives = 316/553 (57%), Gaps = 7/553 (1%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L G +HA V+K P V VSN ++N+Y+K G + A K F E +L+SW+ MIS
Sbjct: 910 LDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISS 969
Query: 78 HHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQS---LVKGQQIHAYSLKFGY 131
+ Q + A+ F + L P+++ AS + AC+ G Q+H Y++K G
Sbjct: 970 YAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGI 1029
Query: 132 ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKL 191
+ SFV +LI +Y K G +A + ++ +L S+NA++ G++++ + K E F L
Sbjct: 1030 INDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSL 1089
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
M G+ D + A ++ +L++G + +K ++ +V + ++ +Y K
Sbjct: 1090 MHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGD 1149
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ A + F I D ++W T I+ D + LSV+ M GV+PD++TFA+++
Sbjct: 1150 MPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVS-GVQPDEYTFATLIK 1208
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
A + L +++ GKQIHA+++++ + D VG +LV+MY KCG + +Y++F +M R VV
Sbjct: 1209 ASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVF 1268
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
WN ++ A H AL LF M++ GI+PD VTFIG+L+AC+H+GL E YF++M
Sbjct: 1269 WNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMF 1328
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
KTYGI+P+IEH++CL+D LGRAG++ EAE P + LL ACR + D
Sbjct: 1329 KTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETA 1388
Query: 492 ERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGT 551
+R+A +L L P+ +S YVLLSN+YA+ W DV AR M+K +KK+P +S I+V+
Sbjct: 1389 KRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNK 1448
Query: 552 FEKFTVAEFSHSK 564
F V + SH +
Sbjct: 1449 VHLFVVDDRSHPQ 1461
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 217/458 (47%), Gaps = 46/458 (10%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L+ G HA ++ G PD ++N+++ +Y+KCG + AR+VFD+ S+R+LV+W+++++
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686
Query: 78 HHQAGE--HLLALEFFSQMHLLPNEYIFA------SAISACAGIQSLVK-GQQIHAYSLK 128
+ Q + + LE F LL E+ F+ + + + V+ + +H Y++K
Sbjct: 687 YAQFADSSYENVLEGFRLFGLL-REFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVK 745
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
G+ FV +L+++Y K G A L++ + E + V +N ++ +VEN ++
Sbjct: 746 IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRF 805
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
F R G PD FS + I V++D+ H VK
Sbjct: 806 FSAFHRSGFXPD-FSNLHCV-IGGVNSDVSNNRKRHAEQVKAY----------------- 846
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
A K F + ++ +WN + H + FK + + D T
Sbjct: 847 ------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRS-TIGHDSVTLVI 899
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
IL+A G + G+QIHA +I+ V V N+L+NMY+K G++ + K F +
Sbjct: 900 ILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELD 959
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
++SWNT+I+++A + L A+ F + G+KPD T +L AC+ EGE YF
Sbjct: 960 LISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTG---DEGE-YFT 1015
Query: 429 SMEKTY------GISPDIEHFTCLIDLLGRAGKLLEAE 460
+ + GI D T LIDL + GK+ EAE
Sbjct: 1016 LGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAE 1053
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 204/453 (45%), Gaps = 39/453 (8%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
+Q ++H +K+G + D+ VS ++N+Y K G + AR +FD+M ER+ V W+ M+
Sbjct: 733 VQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKA 792
Query: 78 HHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVK------GQQIHAYSLKFGY 131
+ + AL FFS H F++ G+ S V +Q+ AY++K
Sbjct: 793 YVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKM-- 850
Query: 132 ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKL 191
F S N+ ++N + F+ Q + FK
Sbjct: 851 --FPFDQGS------------------------NIFAWNKKLTEFLHAGQIVAAIDCFKT 884
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
+LR + D + L ++DL G +H L +K V N++M +YSK +
Sbjct: 885 LLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGV 944
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ AEK F E DLISWNT I++ + + + F+++ D G++PD FT AS+L
Sbjct: 945 VYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRD-GLKPDQFTLASVLR 1003
Query: 312 ACAGLASVQH---GKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
AC+ ++ G Q+H + I+ + D V AL+++Y+K G + + L + +
Sbjct: 1004 ACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFD 1063
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
+ SWN I+ + AL+ F M GI D +T + A +K+G+
Sbjct: 1064 LASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQ-IQ 1122
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ G + D+ + ++D+ + G + A E
Sbjct: 1123 AYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALE 1155
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++L+ S AL+QG +HA V+K+ D V ++++Y KCG + A +VF +M
Sbjct: 1202 TFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKM 1261
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
R +V W+AM+ G Q G AL F M + P++ F +SAC+
Sbjct: 1262 DVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACS 1312
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/553 (35%), Positives = 316/553 (57%), Gaps = 7/553 (1%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L G +HA V+K P V VSN ++N+Y+K G + A K F E +L+SW+ MIS
Sbjct: 910 LDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISS 969
Query: 78 HHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQS---LVKGQQIHAYSLKFGY 131
+ Q + A+ F + L P+++ AS + AC+ G Q+H Y++K G
Sbjct: 970 YAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGI 1029
Query: 132 ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKL 191
+ SFV +LI +Y K G +A + ++ +L S+NA++ G++++ + K E F L
Sbjct: 1030 INDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSL 1089
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
M G+ D + A ++ +L++G + +K ++ +V + ++ +Y K
Sbjct: 1090 MHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGD 1149
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ A + F I D ++W T I+ D + LSV+ M GV+PD++TFA+++
Sbjct: 1150 MPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVS-GVQPDEYTFATLIK 1208
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
A + L +++ GKQIHA+++++ + D VG +LV+MY KCG + +Y++F +M R VV
Sbjct: 1209 ASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVF 1268
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
WN ++ A H AL LF M++ GI+PD VTFIG+L+AC+H+GL E YF++M
Sbjct: 1269 WNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMF 1328
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
KTYGI+P+IEH++CL+D LGRAG++ EAE P + LL ACR + D
Sbjct: 1329 KTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETA 1388
Query: 492 ERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGT 551
+R+A +L L P+ +S YVLLSN+YA+ W DV AR M+K +KK+P +S I+V+
Sbjct: 1389 KRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNK 1448
Query: 552 FEKFTVAEFSHSK 564
F V + SH +
Sbjct: 1449 VHLFVVDDRSHPQ 1461
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 217/458 (47%), Gaps = 46/458 (10%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L+ G HA ++ G PD ++N+++ +Y+KCG + AR+VFD+ S+R+LV+W+++++
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686
Query: 78 HHQAGE--HLLALEFFSQMHLLPNEYIFA------SAISACAGIQSLVK-GQQIHAYSLK 128
+ Q + + LE F LL E+ F+ + + + V+ + +H Y++K
Sbjct: 687 YAQFADSSYENVLEGFRLFGLL-REFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVK 745
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
G+ FV +L+++Y K G A L++ + E + V +N ++ +VEN ++
Sbjct: 746 IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRF 805
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
F R G PD FS + I V++D+ H VK
Sbjct: 806 FSAFHRSGFFPD-FSNLHCV-IGGVNSDVSNNRKRHAEQVKAY----------------- 846
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
A K F + ++ +WN + H + FK + + D T
Sbjct: 847 ------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRS-TIGHDSVTLVI 899
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
IL+A G + G+QIHA +I+ V V N+L+NMY+K G++ + K F +
Sbjct: 900 ILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELD 959
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
++SWNT+I+++A + L A+ F + G+KPD T +L AC+ EGE YF
Sbjct: 960 LISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTG---DEGE-YFT 1015
Query: 429 SMEKTY------GISPDIEHFTCLIDLLGRAGKLLEAE 460
+ + GI D T LIDL + GK+ EAE
Sbjct: 1016 LGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAE 1053
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/456 (25%), Positives = 206/456 (45%), Gaps = 45/456 (9%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
+Q ++H +K+G + D+ VS ++N+Y K G + AR +FD+M ER+ V W+ M+
Sbjct: 733 VQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKA 792
Query: 78 HHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK------GQQIHAYSLK 128
+ + AL FFS H P+ F++ G+ S V +Q+ AY++K
Sbjct: 793 YVENSFQDEALRFFSAFHRSGFFPD---FSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMK 849
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
F S N+ ++N + F+ Q +
Sbjct: 850 M----FPFDQGS------------------------NIFAWNKKLTEFLHAGQIVAAIDC 881
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
FK +LR + D + L ++DL G +H L +K V N++M +YSK
Sbjct: 882 FKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSK 941
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
++ AEK F E DLISWNT I++ + + + F+++ D G++PD FT AS
Sbjct: 942 AGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRD-GLKPDQFTLAS 1000
Query: 309 ILAACAGLASVQH---GKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
+L AC+ ++ G Q+H + I+ + D V AL+++Y+K G + + L +
Sbjct: 1001 VLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKY 1060
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
++ SWN I+ + AL+ F M GI D +T + A +K+G+
Sbjct: 1061 DFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQ 1120
Query: 426 YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ G + D+ + ++D+ + G + A E
Sbjct: 1121 -IQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALE 1155
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++L+ S AL+QG +HA V+K+ D V ++++Y KCG + A +VF +M
Sbjct: 1202 TFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKM 1261
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
R +V W+AM+ G Q G AL F M + P++ F +SAC+
Sbjct: 1262 DVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACS 1312
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/557 (35%), Positives = 324/557 (58%), Gaps = 9/557 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L C + + G S+HA+V+K G++ D ++++ ++ +Y++C A +VF +
Sbjct: 254 TLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRI 313
Query: 64 SERNLVSWSAMIS---GHHQAGEHLLALEFFSQMHLLPNEYIFA--SAISACAGIQSLVK 118
E ++V SAMIS H A E L S M + PN YIF + +++ G +L +
Sbjct: 314 DEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCR 373
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+HAY +K G+A + VG+++++MY+KVG DA + + EP+ S+N +++ F
Sbjct: 374 --SVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYS 431
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
E+G +FK M +G +++++ L C+ +LR G +H +K L+++ V
Sbjct: 432 GSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDV 491
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++ +Y++ A F ++E+D SW ++ + + EK + F+ M ++
Sbjct: 492 SRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLREN- 550
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+RP D T A L+ C+ +AS+ G Q+H+ I+ N V V ALV+MY KCG I+ +
Sbjct: 551 IRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNSSV-VSGALVDMYVKCGNIADAE 609
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
LF+E R+ V+WNTII ++ H G AL F+QM G +PD +TF+G+L+AC+HAG
Sbjct: 610 MLFHESETRDQVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAG 669
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
L+ EG YF S+ YGI+P +EH+ C++D+L +AG+L+EAE + PL D + T+
Sbjct: 670 LLNEGRKYFKSLSSIYGITPTMEHYACMVDILSKAGRLVEAESLINQMPLAPDSSIWRTI 729
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L ACR+ R++ I ER A++LF L+P S +LLSN+YA G W DV R +L D G+K
Sbjct: 730 LGACRIHRNIEIAERAAERLFELEPHDASSSILLSNIYADLGRWSDVTRVRNILLDHGVK 789
Query: 539 KEPSYSMIEVQGTFEKF 555
KEP S IE+ G F
Sbjct: 790 KEPGCSWIEINGQIHMF 806
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 226/454 (49%), Gaps = 5/454 (1%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
L C+ + L++G LHA +L+ + PD + + +LN+Y KCG+++ AR+VFD M R++
Sbjct: 57 LQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDI 116
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAY 125
V+W+AMIS H AG+ AL+ F++M+ + PN + AS + AC+G Q+H
Sbjct: 117 VAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQ 176
Query: 126 SLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKG 185
+K +VG+SL+ Y G A V E + VS+NAL+ G+ + +
Sbjct: 177 VVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRV 236
Query: 186 FEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMAL 245
+ + ++ G +++ L+ C + G +H +K LE++ + + ++ +
Sbjct: 237 MIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEM 296
Query: 246 YSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFT 305
YS+ EA + F I+E D++ + I+ + L +F +MS GV+P+ +
Sbjct: 297 YSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSG-MGVKPNHYI 355
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
F I + + +HA++++ GVG+A++NMY K G + + F+ +
Sbjct: 356 FVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIH 415
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
+ SWNTI++A + L++F+QM G + T++ +L C ++ G
Sbjct: 416 EPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQ 475
Query: 426 YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+ K+ G+ D + L+D+ ++G A
Sbjct: 476 VHACILKS-GLQNDTDVSRMLVDMYAQSGCFTSA 508
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 221/460 (48%), Gaps = 6/460 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++S+L CS + +H V+K+ D V + ++ Y CG++ A V +
Sbjct: 153 TLASVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGL 212
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNE---YIFASAISACAGIQSLVKGQ 120
ER+ VSW+A+++G+ + G++ + ++ +E Y + + C + GQ
Sbjct: 213 PERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQ 272
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+HA +K G + + + + L+ MY + + +A V+ EP++V +A+I+ F +
Sbjct: 273 SVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHD 332
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ ++F M G+ P+ + F G + S + D +H VK VG+
Sbjct: 333 MAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGD 392
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
I+ +Y K + +A F LI E D SWNT ++A ++ E+GL +FK+M+ + G
Sbjct: 393 AILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACE-GFS 451
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ +T+ S+L C L +++ G Q+HA +++ L D V LV+MYA+ G + + +
Sbjct: 452 ANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLV 511
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F ++ R+ SW I++ +A ++ F M I+P T L+ C+ +
Sbjct: 512 FEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASL 571
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
G + K+ S + L+D+ + G + +AE
Sbjct: 572 GSGLQLHSWAIKSGWNSSVVS--GALVDMYVKCGNIADAE 609
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 161/317 (50%), Gaps = 1/317 (0%)
Query: 102 IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA 161
+ A+A+ CA ++L +GQ++HA L+ +F+ +SL++MY K G DA V+
Sbjct: 52 LHAAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGM 111
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
++V++ A+I+ ++ ++F M ++G+ P+ F+ A L+ CS + +
Sbjct: 112 PHRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTH 171
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
+H VK +P+VG++++ Y+ + AE + E+ +SWN + +
Sbjct: 172 QVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHG 231
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
DY + + + +++ G +T ++L C L ++G+ +HA +I+ L D +
Sbjct: 232 DYRRVMIIIEKLVAS-GDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLN 290
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
+ LV MY++C +Y++F + +VV + +I+ H + AL LF +M G+K
Sbjct: 291 SCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVK 350
Query: 402 PDSVTFIGLLTACNHAG 418
P+ F+G+ + G
Sbjct: 351 PNHYIFVGIAGVASRTG 367
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/583 (34%), Positives = 325/583 (55%), Gaps = 12/583 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A +++ + S + G HA +K DV ++ +LN+Y K G + AR +FD
Sbjct: 116 AHTLTGVFTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFD 175
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL--------PNEYIFASAISACAGI 113
EM ERN VSW+ MISG+ LA E F L+ NE++F S +SA
Sbjct: 176 EMPERNAVSWATMISGY---ASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCY 232
Query: 114 QSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALI 173
+ G+Q+H+ ++K G I V N+L++MY+K G DAL + + N ++++A++
Sbjct: 233 MLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMV 292
Query: 174 AGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE 233
GF + +K ++F M + G LP F+ G + CS + + +G +H ++K E
Sbjct: 293 TGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYE 352
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
+V + ++ +Y+K I +A K F I++ D++ W + I DYE L+++ +M
Sbjct: 353 LQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKM 412
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
GV P+D T AS+L AC+ LA++ GKQ+HA +I+ + ++ +G+AL MYAKCG
Sbjct: 413 QLG-GVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGS 471
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ Y++F M R+V+SWN +I+ + + G L+LFE+M G KPD+VTF+ LL+A
Sbjct: 472 LDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSA 531
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C+H GLV G YF M + I+P +EH+ C++D+L RAGKL EA+E+ + +
Sbjct: 532 CSHMGLVDRGWVYFKMMFDEFNIAPTVEHYACMVDILSRAGKLHEAKEFIESATVDHGLC 591
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
+ LL+A + RD +G ++L L +S YVLLS++Y + G W DV R M+K
Sbjct: 592 LWRILLAASKNHRDYDLGAYAGEKLMELGSLESSAYVLLSSIYTALGKWEDVERVRGMMK 651
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
G+ KEP S IE++ F V + H +I EI LK L+
Sbjct: 652 ARGVTKEPGCSWIELKSLTHVFVVGDNMHPQIDEIRLGLKLLT 694
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 241/482 (50%), Gaps = 13/482 (2%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
L HC++ K L++G +LHA +L G ++N ++NLYAKC A VFD ++ +++
Sbjct: 17 LVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDV 76
Query: 69 VSWSAMISGHHQAGEH---LLALEFFSQM-----HLLPNEYIFASAISACAGIQSLVKGQ 120
VSW+ +I+ Q H L + F Q+ ++PN + +A + + G+
Sbjct: 77 VSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGR 136
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q HA ++K + F +SL++MY K G +A ++ E E N VS+ +I+G+ +
Sbjct: 137 QAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQE 196
Query: 181 QPEKGFEVFKLMLRQ--GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
++ FE+FKLM + G + F F L + + G +H L +K L V
Sbjct: 197 LADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSV 256
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N ++ +Y K + +A K F L K+ I+W+ + + D +K L +F +M + G
Sbjct: 257 ANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDM-HQSG 315
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
P +FT ++ AC+ ++ G+Q+H + +++ + V +ALV+MYAKCG I +
Sbjct: 316 ELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDAR 375
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
K F + +VV W +II + + AL L+ +M+ G+ P+ +T +L AC++
Sbjct: 376 KGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLA 435
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
+ +G+ + K Y S +I + L + + G L + + P +D I +
Sbjct: 436 ALDQGKQMHAGIIK-YNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMP-ARDVISWNAM 493
Query: 479 LS 480
+S
Sbjct: 494 IS 495
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 186/394 (47%), Gaps = 14/394 (3%)
Query: 94 MHLLPNEYIFASAISA---CAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGY 150
M LLP + + A C + L KG+ +HA L G S + + NSLI++Y K +
Sbjct: 1 MPLLPLSHQHLQVLRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSH 60
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKL-----MLRQGLLPDRFSFA 205
S A LV+ ++VS+N LI F + Q V L M + ++P+ +
Sbjct: 61 FSKANLVFDSINNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLT 120
Query: 206 GGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK 265
G S +D R G H L VK + F ++++ +Y K L+ EA F + E+
Sbjct: 121 GVFTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPER 180
Query: 266 DLISWNTFIAACSHCADYEKGLSVFKEMSNDH-GVRPDDFTFASILAACAGLASVQHGKQ 324
+ +SW T I+ + ++ +FK M ++ G ++F F S+L+A V G+Q
Sbjct: 181 NAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQ 240
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
+H+ ++ L V V NALV MY KCG + + K F ++N ++W+ ++ A
Sbjct: 241 VHSLAMKNGLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGD 300
Query: 385 GGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFT 444
ALKLF M +G P T +G++ AC+ A + EG + G + +
Sbjct: 301 SDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQ-MHGYSLKLGYELQLYVLS 359
Query: 445 CLIDLLGRAGKLLEAEEYTKKFPLGQDP-IVLGT 477
L+D+ + G +++A K F Q P +VL T
Sbjct: 360 ALVDMYAKCGSIVDAR---KGFECIQQPDVVLWT 390
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/575 (35%), Positives = 336/575 (58%), Gaps = 10/575 (1%)
Query: 12 CSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKC-GKMILARKVFDEMSERNLV 69
CS + + G S+ V+K G +Q DV V +++++ K G ++ A KVF++M ERN V
Sbjct: 178 CSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAV 237
Query: 70 SWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYS 126
+W+ MI+ Q G A++ F M P+ + + ISACA ++ L+ GQQ+H+ +
Sbjct: 238 TWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQA 297
Query: 127 LKFGYASISFVGNSLISMYMKV---GYSSDALLVYGEAFEPNLVSFNALIAGFVENQ-QP 182
++ G VG LI+MY K G A ++ + + N+ S+ A+I G+V+
Sbjct: 298 IRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYD 357
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E+ ++F+ M+ ++P+ F+F+ L+ C+ LR G + VK S V N++
Sbjct: 358 EEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSL 417
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+++Y++ I +A KAF ++ EK+LIS+NT I A + + E+ L +F E+ D G+
Sbjct: 418 ISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIE-DQGMGAS 476
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
FTFAS+L+ A + ++ G+QIHA +I+ L + V NAL++MY++CG I ++++F
Sbjct: 477 AFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFE 536
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+M RNV+SW +II A H AL+LF +M G++P+ VT+I +L+AC+H GLV E
Sbjct: 537 DMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNE 596
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G +F SM +G+ P +EH+ C++D+LGR+G L EA ++ P D +V T L AC
Sbjct: 597 GWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGAC 656
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
R+ ++ +G+ AK + +P + Y+LLSNLYAS W +V+ RK +K+ L KE
Sbjct: 657 RVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAG 716
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
S +EV+ KF V + SH K EI L+ LS+
Sbjct: 717 CSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSV 751
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/467 (30%), Positives = 238/467 (50%), Gaps = 12/467 (2%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++ S L C +T++ G +H + + +Q D + N +++LY+KCG+ A +F
Sbjct: 67 QTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRL 126
Query: 63 M-SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
M S R+L+SWSAM+S AL F M PNEY FA+A AC+ + +
Sbjct: 127 MGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSV 186
Query: 119 GQQIHAYSLKFGY-ASISFVGNSLISMYMK-VGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G I + +K GY S VG LI M++K G A V+ + E N V++ +I
Sbjct: 187 GDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRL 246
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
++ + ++F M+ G PDRF+ +G + C+ L G LH ++ L +
Sbjct: 247 MQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDR 306
Query: 237 FVGNTIMALYSKFNLIGE---AEKAFRLIEEKDLISWNTFIAACSHCADY-EKGLSVFKE 292
VG ++ +Y+K ++ G A K F I + ++ SW I Y E+ L +F+
Sbjct: 307 CVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRG 366
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
M H V P+ FTF+S L ACA LA+++ G+Q+ H +++ + V N+L++MYA+ G
Sbjct: 367 MILTH-VIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSG 425
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
I + K F+ + +N++S+NT+I A+A + AL+LF +++ G+ + TF LL+
Sbjct: 426 RIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLS 485
Query: 413 ACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
G + +GE + K+ G+ + LI + R G + A
Sbjct: 486 GAASIGTIGKGEQIHARVIKS-GLKLNQSVCNALISMYSRCGNIESA 531
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 149/289 (51%), Gaps = 7/289 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS L C+ AL+ G + +K+G V+N ++++YA+ G++ ARK FD +
Sbjct: 378 TFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDIL 437
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
E+NL+S++ +I + + ALE F+++ + + + FAS +S A I ++ KG+
Sbjct: 438 FEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGE 497
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIHA +K G V N+LISMY + G A V+ + + N++S+ ++I GF ++
Sbjct: 498 QIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHG 557
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ E+F ML +G+ P+ ++ L CS + +G H ++ + P + +
Sbjct: 558 FATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGW-KHFKSMYTEHGVIPRMEH 616
Query: 241 --TIMALYSKFNLIGEAEKAFRLIEEK-DLISWNTFIAACSHCADYEKG 286
I+ + + + EA + + K D + W TF+ AC + E G
Sbjct: 617 YACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELG 665
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 144/295 (48%), Gaps = 8/295 (2%)
Query: 164 PNLVSFNALIAGFVE---NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKG 220
P + N L ++ N + K + M+ QG PD +++ L+ C + G
Sbjct: 26 PTFTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIG 85
Query: 221 MILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLI-EEKDLISWNTFIAACSH 279
++H + L+ + N++++LYSK +A FRL+ +DLISW+ ++ ++
Sbjct: 86 TLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFAN 145
Query: 280 CADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM-RLNQDV 338
+ L F +M ++G P+++ FA+ AC+ V G I +I+ L DV
Sbjct: 146 NNMGFRALLTFVDMI-ENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDV 204
Query: 339 GVGNALVNMYAKC-GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA 397
VG L++M+ K G + ++K+F +M RN V+W +I G A+ LF M
Sbjct: 205 CVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIF 264
Query: 398 TGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
+G +PD T G+++AC + L+ G+ +S +G++ D CLI++ +
Sbjct: 265 SGYEPDRFTLSGVISACANMELLLLGQQ-LHSQAIRHGLTLDRCVGCCLINMYAK 318
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 5/186 (2%)
Query: 285 KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNAL 344
K +S + M + G PD T++ L C S G +H L + L D N+L
Sbjct: 49 KAISTLEHMVH-QGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSL 107
Query: 345 VNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPD 403
+++Y+KCG + +F M R+++SW+ +++ AN+ +G AL F M G P+
Sbjct: 108 ISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPN 167
Query: 404 SVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLL--GRAGKLLEAEE 461
F AC+ A V G++ F + KT + D+ LID+ GR G L+ A +
Sbjct: 168 EYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGR-GDLVSAFK 226
Query: 462 YTKKFP 467
+K P
Sbjct: 227 VFEKMP 232
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +SLL + + +G +HA V+K G++ + V N ++++Y++CG + A +VF+
Sbjct: 477 AFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFE 536
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
+M +RN++SW+++I+G + G ALE F +M + PNE + + +SAC+ + + +
Sbjct: 537 DMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNE 596
Query: 119 GQQ 121
G +
Sbjct: 597 GWK 599
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/561 (33%), Positives = 322/561 (57%), Gaps = 4/561 (0%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L++G +H V+ G Q ++ V+NLYAKC ++ A K+F+ M +R+LVSW+ +++G
Sbjct: 158 LRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAG 217
Query: 78 HHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
+ Q G A++ QM P+ S + A A +++L G+ IH Y+ + G+ +
Sbjct: 218 YAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYM 277
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
V +++ Y K G A LV+ N+VS+N +I G+ +N + E+ F F ML
Sbjct: 278 VNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLD 337
Query: 195 QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGE 254
+G+ P S G L C+ DL +G +H L + K+ + V N+++++YSK +
Sbjct: 338 EGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDI 397
Query: 255 AEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA 314
A F ++ K +++WN I + + L++F EM + H ++PD FT S++ A A
Sbjct: 398 AASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQS-HDIKPDSFTLVSVITALA 456
Query: 315 GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNT 374
L+ + K IH IR ++++V V AL++ +AKCG I + KLF+ M R+V++WN
Sbjct: 457 DLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNA 516
Query: 375 IIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTY 434
+I + + G AL LF +M+ +KP+ +TF+ ++ AC+H+GLV+EG YF SM++ Y
Sbjct: 517 MIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENY 576
Query: 435 GISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERL 494
G+ P ++H+ ++DLLGRAG+L +A ++ + P+ VLG +L ACR+ ++V +GE+
Sbjct: 577 GLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKT 636
Query: 495 AKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEK 554
A +LF L P +VLL+N+YAS MW VA R ++ G++K P S++E++
Sbjct: 637 ADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHT 696
Query: 555 FTVAEFSHSKIGEINYMLKTL 575
F +H + I L+TL
Sbjct: 697 FYSGSTNHPQSKRIYAYLETL 717
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 223/471 (47%), Gaps = 11/471 (2%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C+ K L Q + L ++K G + + +++L+ K + A +VF+ + +
Sbjct: 50 LLELCTSLKELHQILPL---IIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKL 106
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
V + M+ G+ + A+ F+ +M ++P Y F + L +G++IH
Sbjct: 107 DVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHG 166
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ G+ S F +++++Y K DA ++ + +LVS+N ++AG+ +N +
Sbjct: 167 MVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARR 226
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
+V M G PD + L + LR G +H + E V ++
Sbjct: 227 AVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLD 286
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
Y K + A F+ + ++++SWNT I + + E+ + F +M D GV P +
Sbjct: 287 TYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKML-DEGVEPTNV 345
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
+ L ACA L ++ G+ +H L ++ DV V N+L++MY+KC + + +F +
Sbjct: 346 SMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNL 405
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
H+ VV+WN +I +A + AL LF +M++ IKPDS T + ++TA + ++ +
Sbjct: 406 KHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAK 465
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
+ + + + ++ T LID + G + A K F L Q+ V+
Sbjct: 466 -WIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTAR---KLFDLMQERHVI 512
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 180/367 (49%), Gaps = 9/367 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+L + KAL+ G S+H + G + V V+ +L+ Y KCG + AR VF M
Sbjct: 245 TLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGM 304
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
S RN+VSW+ MI G+ Q GE A F +M + P A+ ACA + L +G+
Sbjct: 305 SSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGR 364
Query: 121 QIHAY--SLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+H K G+ +S V NSLISMY K A V+G +V++NA+I G+ +
Sbjct: 365 YVHRLLDEKKIGF-DVS-VMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQ 422
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N + +F M + PD F+ + + + R+ +H L ++ ++ N FV
Sbjct: 423 NGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFV 482
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++ ++K I A K F L++E+ +I+WN I + L +F EM N
Sbjct: 483 CTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNG-S 541
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIR-MRLNQDVGVGNALVNMYAKCGLISCS 357
V+P++ TF S++AAC+ V+ G + L + A+V++ + G + +
Sbjct: 542 VKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDA 601
Query: 358 YKLFNEM 364
+K +M
Sbjct: 602 WKFIQDM 608
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/573 (33%), Positives = 330/573 (57%), Gaps = 5/573 (0%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+ LL C + L++G +H ++ G + ++ V V++LYAKC ++ A K+F+ M
Sbjct: 149 ACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQH 208
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQI 122
++LVSW+ +++G+ Q G AL+ QM P+ S + A A +++L G+ I
Sbjct: 209 KDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSI 268
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H Y+ + G+ S+ V N+L+ MY K G + A LV+ +VS+N +I G +N +
Sbjct: 269 HGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGES 328
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E+ F F ML +G +P R + G L C+ DL +G +H L K KL+SN V N++
Sbjct: 329 EEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSL 388
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+++YSK + A F +E+ + ++WN I + ++ L++F M + G++ D
Sbjct: 389 ISMYSKCKRVDIAASIFNNLEKTN-VTWNAMILGYAQNGCVKEALNLFCMMQS-QGIKLD 446
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
FT ++ A A + + K IH +R ++ +V V ALV+MYAKCG I + KLF+
Sbjct: 447 CFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFD 506
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
M R+V++WN +I + H +G L LF +M+ +KP+ +TF+ +++AC+H+G V+E
Sbjct: 507 MMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEE 566
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G F SM++ Y + P ++H++ ++DLLGRAG+L +A + ++ P+ VLG +L AC
Sbjct: 567 GLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGAC 626
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
++ ++V +GE+ A++LF L P +VLL+N+YAS+ MW VA R ++D GL K P
Sbjct: 627 KIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPG 686
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S +E++ F +H + +I L+TL
Sbjct: 687 CSWVELRNEIHTFYSGSTNHPESKKIYAFLETL 719
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 121/459 (26%), Positives = 220/459 (47%), Gaps = 13/459 (2%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL +C+ K L Q + ++K G + + V++L+ K G A +VF+ + +
Sbjct: 53 LLENCTSKKELYQILPF---IIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKL 109
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM-----HLLPNEYIFASAISACAGIQSLVKGQQI 122
V + M+ G+ + AL FF +M L+ +Y A + C L KG++I
Sbjct: 110 DVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDY--ACLLQLCGENLDLKKGREI 167
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H + G+ S FV +++S+Y K +A ++ +LVS+ L+AG+ +N
Sbjct: 168 HGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHA 227
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
++ ++ M G PD + L + LR G +H + ES V N +
Sbjct: 228 KRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNAL 287
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y K A F+ + K ++SWNT I C+ + E+ + F +M D G P
Sbjct: 288 LDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKML-DEGEVPT 346
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
T +L ACA L ++ G +H L +++L+ +V V N+L++MY+KC + + +FN
Sbjct: 347 RVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFN 406
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
L + V+WN +I +A + AL LF M++ GIK D T +G++TA + ++
Sbjct: 407 N-LEKTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQ 465
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ + + + + ++ T L+D+ + G + A +
Sbjct: 466 AK-WIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARK 503
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 180/365 (49%), Gaps = 6/365 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+L + KAL+ G S+H + G + V V+N +L++Y KCG +AR VF M
Sbjct: 248 TLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGM 307
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ +VSW+ MI G Q GE A F +M +P + ACA + L +G
Sbjct: 308 RSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGW 367
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H K S V NSLISMY K A ++ E V++NA+I G+ +N
Sbjct: 368 FVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNN-LEKTNVTWNAMILGYAQNG 426
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
++ +F +M QG+ D F+ G + + + R+ +H L V+ +++N FV
Sbjct: 427 CVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVST 486
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y+K I A K F +++E+ +I+WN I ++ L +F EM V+
Sbjct: 487 ALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKG-AVK 545
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIR-MRLNQDVGVGNALVNMYAKCGLISCSYK 359
P+D TF S+++AC+ V+ G + + L + +A+V++ + G + ++
Sbjct: 546 PNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWN 605
Query: 360 LFNEM 364
EM
Sbjct: 606 FIQEM 610
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/557 (35%), Positives = 319/557 (57%), Gaps = 5/557 (0%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+H VLK+G V N ++ Y KCG++ AR +FDE+S+R++VSW++MISG G
Sbjct: 180 VHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGF 239
Query: 84 HLLALEFFSQMHLLPNEYIFASAIS---ACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
LEFF QM L + A+ ++ ACA + +L G+ +HAY +K G++ N+
Sbjct: 240 SRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNT 299
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
L+ MY K G + A V+ + E +VS+ ++IA V + +F M +GL PD
Sbjct: 300 LLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPD 359
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
++ + C+ SN L KG +H K + SN V N +M +Y+K + EA F
Sbjct: 360 IYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFS 419
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ K+++SWNT I S + + L +F +M ++PDD T A +L ACAGLA+++
Sbjct: 420 QLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQKQ--LKPDDVTMACVLPACAGLAALE 477
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G++IH H++R D+ V ALV+MY KCGL+ + +LF+ + ++++ W +IA +
Sbjct: 478 KGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYG 537
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
H G A+ FE+M+ GI+P+ +F +L AC H+GL+KEG F+SM+ I P +
Sbjct: 538 MHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKL 597
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH 500
EH+ C++DLL R+G L A ++ + P+ D + G LLS CR+ DV + E++A+ +F
Sbjct: 598 EHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFE 657
Query: 501 LQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEF 560
L+P T YVLL+N+YA W +V ++ + GLK + S IEVQG F F +
Sbjct: 658 LEPENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAGDT 717
Query: 561 SHSKIGEINYMLKTLSL 577
SH + I+ +L+ L++
Sbjct: 718 SHPQAKMIDSLLRKLTM 734
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 138/479 (28%), Positives = 250/479 (52%), Gaps = 10/479 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C++ K+L+ G +H+ + G+ D ++ ++ +Y CG ++ R++FD +
Sbjct: 62 SVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILND 121
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQQIH 123
+ W+ ++S + + G + ++ F +M L + Y F + A + + +++H
Sbjct: 122 KIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVH 181
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
Y LK G+ S + V NSLI+ Y K G A +++ E + ++VS+N++I+G N
Sbjct: 182 GYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSR 241
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
G E F ML G+ D + L C+ +L G LH VK NT++
Sbjct: 242 NGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLL 301
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+YSK + A + F + E ++SW + IAA + + + +F EM + G+RPD
Sbjct: 302 DMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQS-KGLRPDI 360
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
+ S++ ACA S+ G+++H H+ + + ++ V NAL+NMYAKCG + + +F++
Sbjct: 361 YAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQ 420
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC-NHAGLVKE 422
+ +N+VSWNT+I ++ + L AL+LF M+ +KPD VT +L AC A L K
Sbjct: 421 LPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQKQ-LKPDDVTMACVLPACAGLAALEKG 479
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
E + + + K Y D+ L+D+ + G L+ A++ P + ++L T++ A
Sbjct: 480 REIHGHILRKGY--FSDLHVACALVDMYVKCGLLVLAQQLFDMIP--KKDMILWTVMIA 534
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 213/414 (51%), Gaps = 11/414 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L C+ L G +LHA +K G V+ +N +L++Y+KCG + A +VF +M
Sbjct: 261 TLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKM 320
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
E +VSW+++I+ H + G H A+ F +M L P+ Y S + ACA SL KG+
Sbjct: 321 GETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGR 380
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H + K S V N+L++MY K G +A L++ + N+VS+N +I G+ +N
Sbjct: 381 EVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNS 440
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
P + ++F M +Q L PD + A L C+ L KG +H ++ S+ V
Sbjct: 441 LPNEALQLFLDMQKQ-LKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVAC 499
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y K L+ A++ F +I +KD+I W IA ++ +S F++M G+
Sbjct: 500 ALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKM-RVAGIE 558
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN--ALVNMYAKCGLISCSY 358
P++ +F SIL AC ++ G ++ + + N + + + +V++ + G +S +Y
Sbjct: 559 PEESSFTSILYACTHSGLLKEGWKLFDSM-KSECNIEPKLEHYACMVDLLIRSGNLSRAY 617
Query: 359 KLFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
K M + + W +++ H A K+ E + ++P++ + LL
Sbjct: 618 KFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFE--LEPENTRYYVLL 669
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 202/421 (47%), Gaps = 4/421 (0%)
Query: 50 CGKMILARKVFDEMSERNL-VSWSAMISGHHQAGEHLLALEFFSQMHLLPNEY-IFASAI 107
CG + E + N+ V +A I + G+ A++ S+ E + S +
Sbjct: 5 CGSSVGVSATLSETTHNNVTVDKNAKICKFCEMGDLRNAMKLLSRSQRSELELNTYCSVL 64
Query: 108 SACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLV 167
CA ++SL G+++H+ G A +G L+ MY+ G ++ +
Sbjct: 65 QLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIF 124
Query: 168 SFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLT 227
+N L++ + + + +F+ M G+ D ++F L+ + S +R+ +H
Sbjct: 125 LWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYV 184
Query: 228 VKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGL 287
+K S V N+++A Y K + A F + ++D++SWN+ I+ C+ GL
Sbjct: 185 LKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGL 244
Query: 288 SVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNM 347
F +M N GV D T ++L ACA + ++ G+ +HA+ ++ + V N L++M
Sbjct: 245 EFFIQMLN-LGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDM 303
Query: 348 YAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTF 407
Y+KCG ++ + ++F +M +VSW +IIAAH L A+ LF++M++ G++PD
Sbjct: 304 YSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAV 363
Query: 408 IGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
++ AC + + +G N ++K + ++ L+++ + G + EA + P
Sbjct: 364 TSVVHACACSNSLDKGREVHNHIKKN-NMGSNLPVSNALMNMYAKCGSMEEANLIFSQLP 422
Query: 468 L 468
+
Sbjct: 423 V 423
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/579 (36%), Positives = 319/579 (55%), Gaps = 7/579 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S++ C + G LH V+K G +I N ++++Y K G++ A VF +
Sbjct: 183 TFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMI 242
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKG 119
S ++L+SW++MI+G Q G + AL F M PNE+IF S SAC + G
Sbjct: 243 STKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFG 302
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+QI KFG F G SL MY K G+ A + + P+LVS+NA+IA N
Sbjct: 303 RQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALA-N 361
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ F M+ GL+PD +F L C L +GM +H +K L+ V
Sbjct: 362 SDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVC 421
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEK-DLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N+++ +Y+K + + +A F+ I E +L+SWN ++ACS + +FK M
Sbjct: 422 NSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSEN 481
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+PD+ T +IL CA L S++ G Q+H ++ L DV V N L++MYAKCGL+ +
Sbjct: 482 -KPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHAR 540
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+F+ + ++VSW+++I +A LG AL LF M+ G++P+ VT++G+L+AC+H G
Sbjct: 541 YVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSHIG 600
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV+EG +N+ME GI P EH +C++DLL RAG L EAE + KK D + TL
Sbjct: 601 LVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKTGFDPDITMWKTL 660
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L++C+ +V I ER A+ + L P+ ++ VLLSN++AS G W +VA R ++K G++
Sbjct: 661 LASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASAGNWKEVARLRNLMKQMGVQ 720
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
K P S IEV+ F + SH + G I ML+ L L
Sbjct: 721 KVPGQSWIEVKDQIHVFFSEDSSHPQRGNIYTMLEDLWL 759
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 155/474 (32%), Positives = 254/474 (53%), Gaps = 11/474 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+L+ C+ ++L+ G +H +LK QPD+++ NH+LN+Y KCG + ARK FD M R
Sbjct: 85 NLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLR 144
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
++VSW+ MISG+ Q G+ A+ + QM P++ F S I AC + G Q+H
Sbjct: 145 SVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLH 204
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ +K GY N+LISMY K G + A V+ +L+S+ ++I GF +
Sbjct: 205 GHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEI 264
Query: 184 KGFEVFKLMLRQGLL-PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
+ +F+ M RQG+ P+ F F C G + + K L N F G ++
Sbjct: 265 EALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSL 324
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+Y+KF + A++AF IE DL+SWN IAA ++ +D + + F +M + G+ PD
Sbjct: 325 CDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALAN-SDVNEAIYFFCQMIH-MGLMPD 382
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
D TF ++L AC ++ G QIH+++I+M L++ V N+L+ MY KC + ++ +F
Sbjct: 383 DITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFK 442
Query: 363 EMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
++ N+VSWN I++A + H+ G A +LF+ M + KPD++T +L C ++
Sbjct: 443 DISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLE 502
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
G K+ G+ D+ LID+ + G LL+ Y F Q+P ++
Sbjct: 503 VGNQVHCFSVKS-GLVVDVSVSNRLIDMYAKCG-LLKHARYV--FDSTQNPDIV 552
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 193/391 (49%), Gaps = 4/391 (1%)
Query: 92 SQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
S + L P+ Y+ + I AC ++SL G++IH + LK + N +++MY K G
Sbjct: 74 SSIQLEPSTYV--NLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSL 131
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
DA + ++VS+ +I+G+ +N Q ++ MLR G PD+ +F ++ C
Sbjct: 132 KDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKAC 191
Query: 212 SVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
++ D+ G LH +K + + N ++++Y+KF I A F +I KDLISW
Sbjct: 192 CIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWA 251
Query: 272 TFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
+ I + + L +F++M +P++F F S+ +AC L + G+QI +
Sbjct: 252 SMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAK 311
Query: 332 MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
L ++V G +L +MYAK G + + + F ++ ++VSWN IIAA AN + A+
Sbjct: 312 FGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALANSDV-NEAIYF 370
Query: 392 FEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLG 451
F QM G+ PD +TF+ LL AC + +G + + K G+ L+ +
Sbjct: 371 FCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKM-GLDKVAAVCNSLLTMYT 429
Query: 452 RAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
+ L +A K + + +LSAC
Sbjct: 430 KCSNLHDAFNVFKDISENGNLVSWNAILSAC 460
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 86/156 (55%)
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHA 327
+S N++I Y + L F + ++ + T+ +++ AC + S+++GK+IH
Sbjct: 45 LSTNSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHD 104
Query: 328 HLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGS 387
H+++ D+ + N ++NMY KCG + + K F+ M R+VVSW +I+ ++ +
Sbjct: 105 HILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQEND 164
Query: 388 ALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
A+ ++ QM +G PD +TF ++ AC AG + G
Sbjct: 165 AIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLG 200
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/579 (35%), Positives = 325/579 (56%), Gaps = 6/579 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S++ CS + LHA VLK D+I N ++++Y K +M A VF +
Sbjct: 201 TFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRI 260
Query: 64 SERNLVSWSAMISGHHQAGEHLLAL----EFFSQMHLLPNEYIFASAISACAGIQSLVKG 119
++L+SW +MI+G Q G L AL E SQ PNE++F SA SAC+ + G
Sbjct: 261 IIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCG 320
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+QIH +KFG S F G SL MY K G+ A V+ +P+LV++NA+IAGF
Sbjct: 321 RQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASV 380
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
++ F M GL+P+ + L CS L G+ +H VK + V
Sbjct: 381 SNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVC 440
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEK-DLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N+++++YSK + + +A + F I K D++SWNT + AC + L + K M
Sbjct: 441 NSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASR- 499
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
++PD T ++L + +AS + G QIH +++ LN D+ V NAL+NMY KCG + C+
Sbjct: 500 IKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECAR 559
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
K+F+ + + +++SW+++I +A G A +LF M+ G+KP+ +TF+G+LTAC+H G
Sbjct: 560 KMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIG 619
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
+V+EG + +M++ Y ISP EH +C++DLL RAG L AE++ K+ P D +V TL
Sbjct: 620 MVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTL 679
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L+AC++ ++ +G+R A+ + + P+ ++ V+L N++AS G W D A R ++ +
Sbjct: 680 LAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVG 739
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
K P S IE++ F + H + G+I ML+ L L
Sbjct: 740 KVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEELML 778
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 144/454 (31%), Positives = 253/454 (55%), Gaps = 7/454 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
L++ CS ++L+ G +H +L QPD+I+ NH+L++Y KCG + AR +FD M +N
Sbjct: 104 LINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKN 163
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHA 124
+VSW++MISG+ + GE A+ + QM +P+ + F S + +C+G+ +Q+HA
Sbjct: 164 VVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHA 223
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ LK + + N+LISMY K +DA+ V+ +L+S+ ++IAGF + +
Sbjct: 224 HVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELE 283
Query: 185 GFEVFKLMLRQGLL-PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
F+ ML Q + P+ F F CS + G +H L +K L S+ F G ++
Sbjct: 284 ALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLC 343
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K + A F IE+ DL++WN IA + ++ ++ S F +M + G+ P+D
Sbjct: 344 DMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHT-GLVPND 402
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T S+L AC+ + HG Q+H+++++M N D+ V N+L++MY+KC ++ + ++F +
Sbjct: 403 VTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFED 462
Query: 364 MLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+ ++ ++VSWNT++ A G L+L + M A+ IKPD VT +L + +
Sbjct: 463 IGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEV 522
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
G + K+ G++ DI LI++ + G L
Sbjct: 523 GSQIHCFIMKS-GLNLDISVSNALINMYTKCGSL 555
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/441 (28%), Positives = 221/441 (50%), Gaps = 8/441 (1%)
Query: 83 EHLLALEFFSQMHLLPNEYI-FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSL 141
E L A + F + P + + + I+AC+ ++SL G++IH + L Y + N +
Sbjct: 80 EALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHI 139
Query: 142 ISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDR 201
+SMY K G +A ++ N+VS+ ++I+G+ + + ++ MLR G +PD
Sbjct: 140 LSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDH 199
Query: 202 FSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRL 261
F+F ++ CS +D + LH +K + ++ N ++++Y+KF+ + +A F
Sbjct: 200 FTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSR 259
Query: 262 IEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQH 321
I KDLISW + IA S + L F+EM + +P++F F S +AC+ L
Sbjct: 260 IIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDC 319
Query: 322 GKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN 381
G+QIH I+ L D+ G +L +MYAKCG + + +F + ++V+WN IIA A+
Sbjct: 320 GRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFAS 379
Query: 382 HRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIE 441
+ F QM+ TG+ P+ VT + LL AC+ ++ G + + K G + DI
Sbjct: 380 VSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKM-GFNLDIP 438
Query: 442 HFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLF-- 499
L+ + + L +A + + D + TLL+AC + RL K +F
Sbjct: 439 VCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFAS 498
Query: 500 HLQPTTTSPYVLLSNLYASDG 520
++P +V L+N+ S G
Sbjct: 499 RIKPD----HVTLTNVLVSSG 515
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/575 (34%), Positives = 318/575 (55%), Gaps = 4/575 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S +S C+ L G LHA +K D +V ++++YAK + AR+ F +
Sbjct: 252 SYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGL 311
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ + +AM+ G +AG + A+ F M + + + SACA + +GQ
Sbjct: 312 PNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQ 371
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H ++K G+ V N+++ +Y K +A L++ + + VS+NA+IA +N
Sbjct: 372 QVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNG 431
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ F MLR G+ PD F++ L+ C+ L G+++H +K L S+ FV +
Sbjct: 432 HYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAS 491
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
T++ +Y K +I EA+K I + ++SWN ++ S + E+ F EM D G++
Sbjct: 492 TVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEML-DMGLK 550
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD FTFA++L CA LA+++ GKQIH +I+ + D + + LV+MYAKCG + S +
Sbjct: 551 PDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLV 610
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F ++ R+ VSWN +I +A H LG AL++FE+M+ + P+ TF+ +L AC+H GL
Sbjct: 611 FEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLF 670
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+G YF+ M Y + P +EHF C++D+LGR+ EA ++ P D ++ TLLS
Sbjct: 671 DDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
C++R+DV I E A + L P +S Y+LLSN+YA G W DV+ R++LK LKKE
Sbjct: 731 ICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKE 790
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P S IEVQ F V + +H + GE+ ML L
Sbjct: 791 PGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDL 825
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 140/460 (30%), Positives = 244/460 (53%), Gaps = 7/460 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + LL CS + L G+ +HA +K G++ DV + ++++Y KC + A F M
Sbjct: 151 TFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGM 210
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQ 120
ERN VSW A I+G Q +++ LE F +M L ++ +ASA +CA + L G+
Sbjct: 211 PERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGR 270
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HA+++K ++S VG +++ +Y K +DA + + + NA++ G V
Sbjct: 271 QLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAG 330
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ +F+ M+R + D S +G C+ + +G +HCL +K + + V N
Sbjct: 331 LGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNN 390
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ LY K + EA F+ +++KD +SWN IAA Y+ + F EM G++
Sbjct: 391 AVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLR-FGMK 449
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PDDFT+ S+L ACA L S+++G +H +I+ L D V + +V+MY KCG+I + KL
Sbjct: 450 PDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKL 509
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
+ + + VVSWN I++ + ++ A K F +M G+KPD TF +L C + +
Sbjct: 510 HDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATI 569
Query: 421 KEGEAYFNSMEKTYGISPDIEHF-TCLIDLLGRAGKLLEA 459
+ G+ + K + D E+ + L+D+ + G + ++
Sbjct: 570 ELGKQIHGQIIKQEML--DDEYISSTLVDMYAKCGDMPDS 607
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 227/455 (49%), Gaps = 6/455 (1%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH 95
D + N +L Y+ G + A +FD M + ++VSW+A++SG+ Q G +++ F +M
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141
Query: 96 ---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSS 152
+ P+ FA + +C+ ++ L G Q+HA ++K G G++L+ MY K
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201
Query: 153 DALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
DAL + E N VS+ A IAG V+N+Q +G E+F M R GL + S+A C+
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261
Query: 213 VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNT 272
+ L G LH +K K S+ VG I+ +Y+K N + +A +AF + + + N
Sbjct: 262 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 321
Query: 273 FIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
+ + + +F+ M +R D + + + +ACA G+Q+H I+
Sbjct: 322 MMVGLVRAGLGIEAMGLFQFMIRS-SIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKS 380
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
+ D+ V NA++++Y KC + +Y +F M ++ VSWN IIAA + + F
Sbjct: 381 GFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHF 440
Query: 393 EQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
+M G+KPD T+ +L AC ++ G + + K+ G+ D + ++D+ +
Sbjct: 441 NEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKS-GLGSDAFVASTVVDMYCK 499
Query: 453 AGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRD 487
G + EA++ + GQ + +LS L ++
Sbjct: 500 CGIIDEAQKLHDRIG-GQQVVSWNAILSGFSLNKE 533
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 109/258 (42%), Gaps = 33/258 (12%)
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD------------ 282
N FV N ++ +Y++ A + F + +D +SWNT + A SH D
Sbjct: 51 NAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMP 110
Query: 283 -------------------YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGK 323
+++ + +F EM+ GV PD TFA +L +C+ L + G
Sbjct: 111 DPDVVSWNALVSGYCQRGMFQESVDLFVEMAR-RGVSPDRTTFAVLLKSCSALEELSLGV 169
Query: 324 QIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR 383
Q+HA ++ L DV G+ALV+MY KC + + F M RN VSW IA +
Sbjct: 170 QVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNE 229
Query: 384 LGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF 443
L+LF +M+ G+ ++ +C + G K S D
Sbjct: 230 QYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKN-KFSSDRVVG 288
Query: 444 TCLIDLLGRAGKLLEAEE 461
T ++D+ +A L +A
Sbjct: 289 TAIVDVYAKANSLTDARR 306
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 7/158 (4%)
Query: 292 EMSNDHGVRPDDFTFASILAACA--GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
E V P TF+ + +CA G ++ G+ HA ++ + V N L+ MYA
Sbjct: 4 EQQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYA 63
Query: 350 KCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
+C +C+ ++F+ M R+ VSWNT++ A+++ +A+ LF+ M PD V++
Sbjct: 64 RCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMP----DPDVVSWNA 119
Query: 410 LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLI 447
L++ G+ +E F M + G+SPD F L+
Sbjct: 120 LVSGYCQRGMFQESVDLFVEMARR-GVSPDRTTFAVLL 156
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/608 (31%), Positives = 334/608 (54%), Gaps = 38/608 (6%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C+ L++G +H V MG++ DV V+ ++ +Y+KCG++ +A +VF +M+ER
Sbjct: 162 SILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTER 221
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
N+VSW+A+I + Q + A E + QM + PN F S +++C ++L +G++IH
Sbjct: 222 NVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIH 281
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN--QQ 181
++ + G + V N+LI+MY K +A ++ + +++S++A+IAG+ ++ +
Sbjct: 282 SHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKD 341
Query: 182 PEKGFEVFKL---MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
E EVF+L M R+G+ P++ +F L C+ L +G +H K E + +
Sbjct: 342 KESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSL 401
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH- 297
I +Y+K I EAE+ F + K++++W +F++ C D VF EM +
Sbjct: 402 QTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNV 461
Query: 298 -----------------------------GVRPDDFTFASILAACAGLASVQHGKQIHAH 328
G +PD T +IL AC LA ++ GK +HA
Sbjct: 462 VSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAE 521
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
+++ L D V +L+ MY+KCG ++ + +F++M +R+ V+WN ++A + H G A
Sbjct: 522 AVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEA 581
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID 448
+ LF++M + P+ +T +++AC+ AGLV+EG F M++ + ++P +H+ C++D
Sbjct: 582 VDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVD 641
Query: 449 LLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSP 508
LLGRAG+L EAEE+ + P D V LL AC+ +V + ER A + L+P+ S
Sbjct: 642 LLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASV 701
Query: 509 YVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
Y+ LSN+YA G W D R+++ D GLKK+ S IE+ G F + +H +I I
Sbjct: 702 YITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAI 761
Query: 569 NYMLKTLS 576
+ L+TL+
Sbjct: 762 HAELETLT 769
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 157/514 (30%), Positives = 257/514 (50%), Gaps = 46/514 (8%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
++ HC+K + + G +H + ++G++ D+ + N ++N Y+K + A +VF M+ R+
Sbjct: 62 VIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRD 121
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
+V+WS+MI+ + A + F +M ++ PN F S + AC L KG++IH
Sbjct: 122 VVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHT 181
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
G + V +LI+MY K G S A V+ + E N+VS+ A+I ++++ +
Sbjct: 182 IVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNE 241
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
FE+++ ML+ G+ P+ +F L C+ L +G +H + LE++ V N ++
Sbjct: 242 AFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALIT 301
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIA--ACSHCADYEKGLSVFK--EMSNDHGVR 300
+Y K N + EA + F + ++D+ISW+ IA A S D E VF+ E GV
Sbjct: 302 MYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVF 361
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI------ 354
P+ TF SIL AC +++ G+QIHA L ++ D + A+ NMYAKCG I
Sbjct: 362 PNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQV 421
Query: 355 -------------------------SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
S + K+F+EM RNVVSWN +IA +A + G +
Sbjct: 422 FSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQN---GDIV 478
Query: 390 KLFE---QMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCL 446
K+FE MKA G +PD VT I +L AC ++ G+ K G+ D T L
Sbjct: 479 KVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVK-LGLESDTVVATSL 537
Query: 447 IDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
I + + G++ EA K +D + +L+
Sbjct: 538 IGMYSKCGQVAEARTVFDKMS-NRDTVAWNAMLA 570
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 113/363 (31%), Positives = 187/363 (51%), Gaps = 40/363 (11%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + SLL+ C+ +AL +G +H+ + + G++ D+IV+N ++ +Y KC + AR++FD
Sbjct: 258 AVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFD 317
Query: 62 EMSERNLVSWSAMISGHHQAG--------EHLLALEFFSQMHLLPNEYIFASAISACAGI 113
MS+R+++SWSAMI+G+ Q+G E LE + + PN+ F S + AC
Sbjct: 318 RMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAH 377
Query: 114 QSLVKGQQIHAYSLKFGY------------------------------ASISFVG-NSLI 142
+L +G+QIHA K G+ A+ + V S +
Sbjct: 378 GALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFL 437
Query: 143 SMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRF 202
SMY+K G S A V+ E N+VS+N +IAG+ +N K FE+ M +G PDR
Sbjct: 438 SMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRV 497
Query: 203 SFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLI 262
+ LE C L +G ++H VK LES+ V +++ +YSK + EA F +
Sbjct: 498 TVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKM 557
Query: 263 EEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG 322
+D ++WN +A D + + +FK M + V P++ T ++++AC+ VQ G
Sbjct: 558 SNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKER-VSPNEITLTAVISACSRAGLVQEG 616
Query: 323 KQI 325
++I
Sbjct: 617 REI 619
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 196/401 (48%), Gaps = 9/401 (2%)
Query: 71 WSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFG 130
W +G + LL + Q LL N + I CA + G+ +H + G
Sbjct: 29 WRLCKAGRLREAIQLLGI--IKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELG 86
Query: 131 YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFK 190
++GNSLI+ Y K + A V+ ++V+++++IA + N P K F+ F+
Sbjct: 87 VEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFE 146
Query: 191 LMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN 250
M + P+R +F L+ C+ + L KG +H + +E++ V ++ +YSK
Sbjct: 147 RMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCG 206
Query: 251 LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
I A + F + E++++SW I A + + ++++M G+ P+ TF S+L
Sbjct: 207 EISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQ-AGISPNAVTFVSLL 265
Query: 311 AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVV 370
+C ++ G++IH+H+ L D+ V NAL+ MY KC + + ++F+ M R+V+
Sbjct: 266 NSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVI 325
Query: 371 SWNTIIAAHA-----NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
SW+ +IA +A + +L E+M+ G+ P+ VTF+ +L AC G +++G
Sbjct: 326 SWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQ 385
Query: 426 YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
+ K G D T + ++ + G + EAE+ K
Sbjct: 386 IHAELSKV-GFELDRSLQTAIFNMYAKCGSIYEAEQVFSKM 425
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/575 (33%), Positives = 326/575 (56%), Gaps = 4/575 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + LL C L+ G +H ++K G D+ + N+YAKC ++ ARKVFD M
Sbjct: 137 NFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRM 196
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
ER+LVSW+ +++G+ Q G +ALE M +L P+ S + A + ++ + G+
Sbjct: 197 PERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGK 256
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+IH Y+++ G+ S+ + +L+ MY K G A ++ E N+VS+N++I +V+N+
Sbjct: 257 EIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNE 316
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
P++ +F+ ML +G+ P S G L C+ DL +G +H L+V+ L+ N V N
Sbjct: 317 NPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVN 376
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++++Y K + A F ++ + L+SWN I + L+ F +M + V+
Sbjct: 377 SLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS-RTVK 435
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD FT+ S++ A A L+ H K IH ++R L+++V V ALV+MYAKCG I + +
Sbjct: 436 PDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLI 495
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+ M R+V +WN +I + H G +AL+LFE+M+ IKP+ VTF+ +++AC+H+GLV
Sbjct: 496 FDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLV 555
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+ G F M++ Y I ++H+ ++DLLGRAG+L EA ++ + P+ V G +L
Sbjct: 556 EAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLG 615
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC++ ++V E+ A++LF L P +VLL+N+Y + MW V R + GL+K
Sbjct: 616 ACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKT 675
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P SM+E++ F +H +I L+ L
Sbjct: 676 PGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKL 710
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 224/456 (49%), Gaps = 8/456 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL CS K L+Q + L V K G+ + +++L+ + G + A +VF+ + +
Sbjct: 43 LLERCSSLKELRQILPL---VFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
V + M+ G + + AL+FF +M + P Y F + C L G++IH
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+K G++ F L +MY K ++A V+ E +LVS+N ++AG+ +N
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
E+ K M + L P + L S + G +H ++ +S + ++
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD 279
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y+K + A + F + E++++SWN+ I A + ++ + +F++M D GV+P D
Sbjct: 280 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML-DEGVKPTDV 338
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
+ L ACA L ++ G+ IH + + L+++V V N+L++MY KC + + +F ++
Sbjct: 339 SVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL 398
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
R +VSWN +I A + AL F QM++ +KPD+ T++ ++TA + +
Sbjct: 399 QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 458
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
+ + + + ++ T L+D+ + G ++ A
Sbjct: 459 -WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIAR 493
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 182/364 (50%), Gaps = 10/364 (2%)
Query: 90 FFSQMHLLPN---EYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYM 146
F S+ + +P E+ A + C+ ++ L +QI K G F L+S++
Sbjct: 24 FLSERNYIPANVYEHPAALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFC 80
Query: 147 KVGYSSDALLVYGEAFEPNL-VSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA 205
+ G +A V+ E + L V ++ ++ GF + +K + F M + P ++F
Sbjct: 81 RYGSVDEAARVF-EPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFT 139
Query: 206 GGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK 265
L++C +LR G +H L VK + F + +Y+K + EA K F + E+
Sbjct: 140 YLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER 199
Query: 266 DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
DL+SWNT +A S L + K M ++ ++P T S+L A + L + GK+I
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEMVKSMCEEN-LKPSFITIVSVLPAVSALRLISVGKEI 258
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
H + +R + V + ALV+MYAKCG + + +LF+ ML RNVVSWN++I A+ +
Sbjct: 259 HGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENP 318
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
A+ +F++M G+KP V+ +G L AC G ++ G + + + G+ ++
Sbjct: 319 KEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR-FIHKLSVELGLDRNVSVVNS 377
Query: 446 LIDL 449
LI +
Sbjct: 378 LISM 381
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 127/254 (50%), Gaps = 5/254 (1%)
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDL 267
LE CS +LR+ + L K L F +++L+ ++ + EA + F I+ K
Sbjct: 44 LERCSSLKELRQ---ILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLN 100
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHA 327
+ ++T + + +D +K L F M D V P + F +L C A ++ GK+IH
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYD-DVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 328 HLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGS 387
L++ + D+ L NMYAKC ++ + K+F+ M R++VSWNTI+A ++ + +
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 388 ALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLI 447
AL++ + M +KP +T + +L A + L+ G+ ++ G + T L+
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS-GFDSLVNISTALV 278
Query: 448 DLLGRAGKLLEAEE 461
D+ + G L A +
Sbjct: 279 DMYAKCGSLETARQ 292
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/575 (34%), Positives = 318/575 (55%), Gaps = 4/575 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S +S C+ L G LHA +K D +V ++++YAK + AR+ F +
Sbjct: 252 SYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGL 311
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ + +AM+ G +AG + A+ F M + + + SACA + +GQ
Sbjct: 312 PNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQ 371
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H ++K G+ V N+++ +Y K +A L++ + + VS+NA+IA +N
Sbjct: 372 QVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNG 431
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ F MLR G+ PD F++ L+ C+ L G+++H +K L S+ FV +
Sbjct: 432 HYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAS 491
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
T++ +Y K +I EA+K I + ++SWN ++ S + E+ F EM D G++
Sbjct: 492 TVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEML-DMGLK 550
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD FTFA++L CA LA+++ GKQIH +I+ + D + + LV+MYAKCG + S +
Sbjct: 551 PDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLV 610
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F ++ R+ VSWN +I +A H LG AL++FE+M+ + P+ TF+ +L AC+H GL
Sbjct: 611 FEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLF 670
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+G YF+ M Y + P +EHF C++D+LGR+ EA ++ P D ++ TLLS
Sbjct: 671 DDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
C++R+DV I E A + L P +S Y+LLSN+YA G W DV+ R++LK LKKE
Sbjct: 731 ICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKE 790
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P S IEVQ F V + +H + GE+ ML L
Sbjct: 791 PGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDL 825
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 140/460 (30%), Positives = 244/460 (53%), Gaps = 7/460 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + LL CS + L G+ +HA +K G++ DV + ++++Y KC + A F M
Sbjct: 151 TFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGM 210
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQ 120
ERN VSW A I+G Q +++ LE F +M L ++ +ASA +CA + L G+
Sbjct: 211 PERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGR 270
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HA+++K ++S VG +++ +Y K +DA + + + NA++ G V
Sbjct: 271 QLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAG 330
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ +F+ M+R + D S +G C+ + +G +HCL +K + + V N
Sbjct: 331 LGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNN 390
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ LY K + EA F+ +++KD +SWN IAA Y+ + F EM G++
Sbjct: 391 AVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLR-FGMK 449
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PDDFT+ S+L ACA L S+++G +H +I+ L D V + +V+MY KCG+I + KL
Sbjct: 450 PDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKL 509
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
+ + + VVSWN I++ + ++ A K F +M G+KPD TF +L C + +
Sbjct: 510 HDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATI 569
Query: 421 KEGEAYFNSMEKTYGISPDIEHF-TCLIDLLGRAGKLLEA 459
+ G+ + K + D E+ + L+D+ + G + ++
Sbjct: 570 ELGKQIHGQIIKQEML--DDEYISSTLVDMYAKCGDMPDS 607
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 227/455 (49%), Gaps = 6/455 (1%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH 95
D + N +L Y+ G + A +FD M + ++VSW+A++SG+ Q G +++ F +M
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141
Query: 96 ---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSS 152
+ P+ FA + +C+ ++ L G Q+HA ++K G G++L+ MY K
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201
Query: 153 DALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
DAL + E N VS+ A IAG V+N+Q +G E+F M R GL + S+A C+
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261
Query: 213 VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNT 272
+ L G LH +K K S+ VG I+ +Y+K N + +A +AF + + + N
Sbjct: 262 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 321
Query: 273 FIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
+ + + +F+ M +R D + + + +ACA G+Q+H I+
Sbjct: 322 MMVGLVRAGLGIEAMGLFQFMIRS-SIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKS 380
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
+ D+ V NA++++Y KC + +Y +F M ++ VSWN IIAA + + F
Sbjct: 381 GFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHF 440
Query: 393 EQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
+M G+KPD T+ +L AC ++ G + + K+ G+ D + ++D+ +
Sbjct: 441 NEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKS-GLGSDAFVASTVVDMYCK 499
Query: 453 AGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRD 487
G + EA++ + GQ + +LS L ++
Sbjct: 500 CGIIDEAQKLHDRIG-GQQVVSWNAILSGFSLNKE 533
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 33/256 (12%)
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD-------------- 282
FV N ++ +Y++ A + F + +D +SWNT + A SH D
Sbjct: 53 FVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDP 112
Query: 283 -----------------YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
+++ + +F EM+ GV PD TFA +L +C+ L + G Q+
Sbjct: 113 DVVSWNALVSGYCQRGMFQESVDLFVEMAR-RGVSPDRTTFAVLLKSCSALEELSLGVQV 171
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
HA ++ L DV G+ALV+MY KC + + F M RN VSW IA +
Sbjct: 172 HALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQY 231
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
L+LF +M+ G+ ++ +C + G K S D T
Sbjct: 232 VRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKN-KFSSDRVVGTA 290
Query: 446 LIDLLGRAGKLLEAEE 461
++D+ +A L +A
Sbjct: 291 IVDVYAKANSLTDARR 306
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 9/159 (5%)
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG---VGNALVNMY 348
E V P TF+ + +CA A + A RM ++ V V N L+ MY
Sbjct: 4 EQQQPPPVAPARVTFSRVFQSCAQ-AGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMY 62
Query: 349 AKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
A+C +C+ ++F+ M R+ VSWNT++ A+++ +A+ LF+ M PD V++
Sbjct: 63 ARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMP----DPDVVSWN 118
Query: 409 GLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLI 447
L++ G+ +E F M + G+SPD F L+
Sbjct: 119 ALVSGYCQRGMFQESVDLFVEMARR-GVSPDRTTFAVLL 156
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/575 (34%), Positives = 318/575 (55%), Gaps = 4/575 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S +S C+ L G LHA +K D +V ++++YAK + AR+ F +
Sbjct: 294 SYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGL 353
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ + +AM+ G +AG + A+ F M + + + SACA + +GQ
Sbjct: 354 PNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQ 413
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H ++K G+ V N+++ +Y K +A L++ + + VS+NA+IA +N
Sbjct: 414 QVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNG 473
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ F MLR G+ PD F++ L+ C+ L G+++H +K L S+ FV +
Sbjct: 474 HYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAS 533
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
T++ +Y K +I EA+K I + ++SWN ++ S + E+ F EM D G++
Sbjct: 534 TVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEML-DMGLK 592
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD FTFA++L CA LA+++ GKQIH +I+ + D + + LV+MYAKCG + S +
Sbjct: 593 PDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLV 652
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F ++ R+ VSWN +I +A H LG AL++FE+M+ + P+ TF+ +L AC+H GL
Sbjct: 653 FEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLF 712
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+G YF+ M Y + P +EHF C++D+LGR+ EA ++ P D ++ TLLS
Sbjct: 713 DDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 772
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
C++R+DV I E A + L P +S Y+LLSN+YA G W DV+ R++LK LKKE
Sbjct: 773 ICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKE 832
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P S IEVQ F V + +H + GE+ ML L
Sbjct: 833 PGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDL 867
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 140/460 (30%), Positives = 244/460 (53%), Gaps = 7/460 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + LL CS + L G+ +HA +K G++ DV + ++++Y KC + A F M
Sbjct: 193 TFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGM 252
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQ 120
ERN VSW A I+G Q +++ LE F +M L ++ +ASA +CA + L G+
Sbjct: 253 PERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGR 312
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HA+++K ++S VG +++ +Y K +DA + + + NA++ G V
Sbjct: 313 QLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAG 372
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ +F+ M+R + D S +G C+ + +G +HCL +K + + V N
Sbjct: 373 LGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNN 432
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ LY K + EA F+ +++KD +SWN IAA Y+ + F EM G++
Sbjct: 433 AVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLR-FGMK 491
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PDDFT+ S+L ACA L S+++G +H +I+ L D V + +V+MY KCG+I + KL
Sbjct: 492 PDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKL 551
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
+ + + VVSWN I++ + ++ A K F +M G+KPD TF +L C + +
Sbjct: 552 HDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATI 611
Query: 421 KEGEAYFNSMEKTYGISPDIEHF-TCLIDLLGRAGKLLEA 459
+ G+ + K + D E+ + L+D+ + G + ++
Sbjct: 612 ELGKQIHGQIIKQEML--DDEYISSTLVDMYAKCGDMPDS 649
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 227/455 (49%), Gaps = 6/455 (1%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH 95
D + N +L Y+ G + A +FD M + ++VSW+A++SG+ Q G +++ F +M
Sbjct: 124 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 183
Query: 96 ---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSS 152
+ P+ FA + +C+ ++ L G Q+HA ++K G G++L+ MY K
Sbjct: 184 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 243
Query: 153 DALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
DAL + E N VS+ A IAG V+N+Q +G E+F M R GL + S+A C+
Sbjct: 244 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 303
Query: 213 VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNT 272
+ L G LH +K K S+ VG I+ +Y+K N + +A +AF + + + N
Sbjct: 304 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 363
Query: 273 FIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
+ + + +F+ M +R D + + + +ACA G+Q+H I+
Sbjct: 364 MMVGLVRAGLGIEAMGLFQFMIRS-SIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKS 422
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
+ D+ V NA++++Y KC + +Y +F M ++ VSWN IIAA + + F
Sbjct: 423 GFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHF 482
Query: 393 EQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
+M G+KPD T+ +L AC ++ G + + K+ G+ D + ++D+ +
Sbjct: 483 NEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKS-GLGSDAFVASTVVDMYCK 541
Query: 453 AGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRD 487
G + EA++ + GQ + +LS L ++
Sbjct: 542 CGIIDEAQKLHDRIG-GQQVVSWNAILSGFSLNKE 575
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 33/256 (12%)
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD-------------- 282
FV N ++ +Y++ A + F + +D +SWNT + A SH D
Sbjct: 95 FVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDP 154
Query: 283 -----------------YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
+++ + +F EM+ GV PD TFA +L +C+ L + G Q+
Sbjct: 155 DVVSWNALVSGYCQRGMFQESVDLFVEMAR-RGVSPDRTTFAVLLKSCSALEELSLGVQV 213
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
HA ++ L DV G+ALV+MY KC + + F M RN VSW IA +
Sbjct: 214 HALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQY 273
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
L+LF +M+ G+ ++ +C + G K S D T
Sbjct: 274 VRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKN-KFSSDRVVGTA 332
Query: 446 LIDLLGRAGKLLEAEE 461
++D+ +A L +A
Sbjct: 333 IVDVYAKANSLTDARR 348
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 9/159 (5%)
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG---VGNALVNMY 348
E V P TF+ + +CA A + A RM ++ V V N L+ MY
Sbjct: 46 EQQQPPPVAPARVTFSRVFQSCAQ-AGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMY 104
Query: 349 AKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
A+C +C+ ++F+ M R+ VSWNT++ A+++ +A+ LF+ M PD V++
Sbjct: 105 ARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMP----DPDVVSWN 160
Query: 409 GLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLI 447
L++ G+ +E F M + G+SPD F L+
Sbjct: 161 ALVSGYCQRGMFQESVDLFVEMARR-GVSPDRTTFAVLL 198
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/575 (36%), Positives = 316/575 (54%), Gaps = 4/575 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+ C+ A + G LH LK DVIV L++YAKC M A K+F +
Sbjct: 260 TYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLL 319
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+ NL S++AMI G+ + + A + F Q+ +E + A+SA A I+ +G
Sbjct: 320 PDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGL 379
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H ++K +S V N+++ MY K G +A ++ E + VS+NA+I +N+
Sbjct: 380 QLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNE 439
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
K F MLR + PD F++ L+ C+ GM +H +K + FVG+
Sbjct: 440 SEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGS 499
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +YSK ++ EAEK +EE+ ++SWN I+ S E F M + GV
Sbjct: 500 ALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHML-EMGVE 558
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD+FT+A++L CA LA+V GKQIHA +I++ L DV + + LV+MY+KCG + S +
Sbjct: 559 PDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLM 618
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F + R+ V+WN +I A H LG AL+LFE M IKP+ TF+ +L AC+H G
Sbjct: 619 FRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNA 678
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
K+G YF M Y + P +EH++C++D+LGR+G++ EA + P D I+ TLLS
Sbjct: 679 KKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLS 738
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
C+++ +V + E+ A L L P +S Y LLSN+YA GMW V+ R+ ++ LKKE
Sbjct: 739 ICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKE 798
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P S IEV+ F V + +H K I +L L
Sbjct: 799 PGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLL 833
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 145/462 (31%), Positives = 242/462 (52%), Gaps = 11/462 (2%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
CS + GI +H ++MG DV+ + ++++YAKC + + VF E+ ++N +SW
Sbjct: 167 CSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISW 226
Query: 72 SAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
SA I+G Q + L L+ F +M + ++ +AS +CAG+ + G Q+H ++LK
Sbjct: 227 SAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALK 286
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
+ S VG + + MY K SDA ++ + NL S+NA+I G+ N+Q GF+
Sbjct: 287 TDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQ---GFQA 343
Query: 189 FKLML---RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMAL 245
FKL L + D S +G L +V +G+ LH L +K L SN V N I+ +
Sbjct: 344 FKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDM 403
Query: 246 YSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFT 305
Y K + EA F +E +D +SWN I AC K LS F M + PD+FT
Sbjct: 404 YGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSK-MEPDEFT 462
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
+ S+L ACAG + +G ++H +I+ + + VG+ALV+MY+KCG++ + K+ +
Sbjct: 463 YGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLE 522
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
+ +VSWN II+ + + + + F M G++PD+ T+ +L C + V G+
Sbjct: 523 EQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQ 582
Query: 426 YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
M K +S D+ + L+D+ + G + ++ +K P
Sbjct: 583 IHAQMIKLELLS-DVYITSTLVDMYSKCGNMHDSLLMFRKAP 623
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 145/501 (28%), Positives = 241/501 (48%), Gaps = 51/501 (10%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
K+ S + CS +AL+ G HA ++ G P V V+N ++ +Y KC + A KVF+E
Sbjct: 25 KTFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEE 84
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH--------------------------- 95
M +R++VSW+ M+ G AG LA F+ M
Sbjct: 85 MPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAV 144
Query: 96 --------LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMK 147
++ + A ++ C+ ++ V G QIH +++ G+ G++L+ MY K
Sbjct: 145 FLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAK 204
Query: 148 VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGG 207
D+L V+ E + N +S++A IAG V+N Q +G ++FK M R+G+ + ++A
Sbjct: 205 CNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASV 264
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDL 267
C+ + R G LHC +K S+ VG + +Y+K + + +A K F L+ + +L
Sbjct: 265 FRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNL 324
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEM--SNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
S+N I A E+G FK + D+ + + L+A A + G Q+
Sbjct: 325 QSYNAMIIG---YARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQL 381
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
H I+ L+ ++ V NA+++MY KCG + + LF+EM R+ VSWN II A +
Sbjct: 382 HGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESE 441
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK-----TYGISPDI 440
G L F M + ++PD T+ +L AC AG A+ N ME G+ +
Sbjct: 442 GKTLSHFGAMLRSKMEPDEFTYGSVLKAC--AG----QRAFSNGMEVHGRIIKSGMGLKM 495
Query: 441 EHFTCLIDLLGRAGKLLEAEE 461
+ L+D+ + G + EAE+
Sbjct: 496 FVGSALVDMYSKCGMMEEAEK 516
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 111/251 (44%), Gaps = 35/251 (13%)
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
R +F+ + CS L+ G H + FV N ++ +Y K + A K F
Sbjct: 24 RKTFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFE 83
Query: 261 LIEEKDLISWNTFIAACS--------------------------------HCADYEKGLS 288
+ ++D++SWNT + C+ D +K ++
Sbjct: 84 EMPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIA 143
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMY 348
VF +M D GV D T A L C+ L G QIH ++M + DV G+ALV+MY
Sbjct: 144 VFLKM-RDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMY 202
Query: 349 AKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
AKC + S +F+E+ +N +SW+ IA + LKLF++M+ GI T+
Sbjct: 203 AKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYA 262
Query: 409 GLLTACNHAGL 419
+ +C AGL
Sbjct: 263 SVFRSC--AGL 271
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/575 (35%), Positives = 325/575 (56%), Gaps = 4/575 (0%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
IS L C+ + G LH +K G+ V VS+ ++++Y K GK+ +VF++M
Sbjct: 127 ISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMM 186
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
RN+VSW+A+I+G AG ++ L +FS+M + + + FA A+ A A L G+
Sbjct: 187 TRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKA 246
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
IH ++K G+ SFV N+L +MY K G + ++ + P++VS+ LI+ +V+ +
Sbjct: 247 IHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGE 306
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
E E FK M + + P++++FA + C+ + G +H ++ L + V N+
Sbjct: 307 EEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANS 366
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
I+ LYSK L+ A F I KD+ISW+T I+ S ++ M + G +P
Sbjct: 367 IITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRRE-GPKP 425
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
++F +S+L+ C +A ++ GKQ+HAHL+ + ++ + V +A+++MY+KCG + + K+F
Sbjct: 426 NEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIF 485
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
N M +++SW +I +A H A+ LFE++ + G+KPD V FIG+LTACNHAG+V
Sbjct: 486 NGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVD 545
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
G YF M Y ISP EH+ CLIDLL RAG+L EAE + P D +V TLL A
Sbjct: 546 LGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRA 605
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
CR+ DV G A+QL L P + ++ L+N+YA+ G W + A RK++K G+ KE
Sbjct: 606 CRVHGDVDRGRWTAEQLLQLDPNSAGTHITLANIYAAKGRWKEAAHIRKLMKSKGVIKER 665
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
+S + V F + +H + I +LK LS
Sbjct: 666 GWSWVNVNDQLNAFVAGDQAHPQSEHITTVLKLLS 700
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 228/428 (53%), Gaps = 12/428 (2%)
Query: 41 NHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP-- 98
N L K G++ AR +FD+M+ R+ +SW+ +I+G+ A + AL FS M + P
Sbjct: 61 NSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGP 120
Query: 99 --NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALL 156
++++ + A+ ACA ++ G+ +H +S+K G FV ++LI MYMKVG
Sbjct: 121 QRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCR 180
Query: 157 VYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSND 216
V+ + N+VS+ A+IAG V +G F M R + D +FA L+ + S+
Sbjct: 181 VFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSL 240
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE---KDLISWNTF 273
L G +H T+K + + FV NT+ +Y+K G+ + RL E+ D++SW T
Sbjct: 241 LHHGKAIHTQTIKQGFDESSFVINTLATMYNK---CGKPDYVMRLFEKMRMPDVVSWTTL 297
Query: 274 IAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR 333
I+ + E + FK M + V P+ +TFA+++++CA LA+ + G+QIH H++R+
Sbjct: 298 ISTYVQMGEEEHAVEAFKRMRKSY-VSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLG 356
Query: 334 LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFE 393
L + V N+++ +Y+KCGL+ + +F+ + ++++SW+TII+ ++ A
Sbjct: 357 LVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLS 416
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 453
M+ G KP+ +L+ C L+++G+ + GI + + +I + +
Sbjct: 417 WMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHL-LCIGIDHEAMVHSAIISMYSKC 475
Query: 454 GKLLEAEE 461
G + EA +
Sbjct: 476 GSVQEASK 483
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 160/328 (48%), Gaps = 6/328 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++++ C+ A + G +H VL++G+ + V+N ++ LY+KCG + A VF +
Sbjct: 328 TFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGI 387
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+ ++++SWS +IS + Q G A ++ S M PNE+ +S +S C + L +G+
Sbjct: 388 TRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGK 447
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HA+ L G + V +++ISMY K G +A ++ +++S+ A+I G+ E+
Sbjct: 448 QVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHG 507
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC-KLESNPFVG 239
++ +F+ + GL PD F G L C+ + + G L ++ +
Sbjct: 508 YSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHY 567
Query: 240 NTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKEMSN-DH 297
++ L + + EAE R + D + W+T + AC D ++G +++ D
Sbjct: 568 GCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTAEQLLQLDP 627
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQI 325
T A+I AA H +++
Sbjct: 628 NSAGTHITLANIYAAKGRWKEAAHIRKL 655
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/572 (34%), Positives = 324/572 (56%), Gaps = 5/572 (0%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L CS A++ G+ +H+ G++ DV V +++ YAKCG ++ A+++F MS R+
Sbjct: 115 VLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRD 174
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
+V+W+AMI+G G A++ QM + PN + ++L G+ +H
Sbjct: 175 VVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHG 234
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
Y ++ + + VG L+ MY K A ++ N VS++A+I G+V + ++
Sbjct: 235 YCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKE 294
Query: 185 GFEVF-KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
E+F +++L+ + P + L C+ DL +G LHC +K + +GNT++
Sbjct: 295 ALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLL 354
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
++Y+K +I +A + F + KD +S++ ++ C + LS+F+ M G+ PD
Sbjct: 355 SMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLS-GIDPDL 413
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T +L AC+ LA++QHG H +LI D + NAL++MY+KCG IS + ++FN
Sbjct: 414 TTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNR 473
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M ++VSWN +I + H LG AL LF + A G+KPD +TFI LL++C+H+GLV EG
Sbjct: 474 MDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEG 533
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
+F++M + + I P +EH C++D+LGRAG + EA + + P D + LLSACR
Sbjct: 534 RLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACR 593
Query: 484 LRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSY 543
+ +++ +GE ++K++ L P +T +VLLSN+Y++ G W D A R KD GLKK P
Sbjct: 594 IHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGC 653
Query: 544 SMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S IE+ G F + SH ++ +IN L+ L
Sbjct: 654 SWIEINGIVHAFVGGDQSHLQLSQINRKLEEL 685
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/457 (27%), Positives = 233/457 (50%), Gaps = 4/457 (0%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C ++K+L + +H LK D V + + LY C +++LAR++FDE+ +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 68 LVSWSAMISGHHQAGEHLLALEFF-SQMHL--LPNEYIFASAISACAGIQSLVKGQQIHA 124
++ W+ +I + G A++ + S +HL PN+Y + + AC+G+ ++ G +IH+
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
++ FG S FV +L+ Y K G +A ++ ++V++NA+IAG +
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
++ M +G+ P+ + G L + L G LH V+ ++ VG ++
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLD 253
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y+K + A K F ++ ++ +SW+ I ++ L +F +M + P
Sbjct: 254 MYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPV 313
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T S+L ACA L + G+++H ++I++ D+ +GN L++MYAKCG+I + + F+ M
Sbjct: 314 TLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXM 373
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
++ VS++ I++ + AL +F M+ +GI PD T +G+L AC+H ++ G
Sbjct: 374 NPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGF 433
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ G + D LID+ + GK+ A E
Sbjct: 434 CSHGYL-IVRGFATDTLICNALIDMYSKCGKISFARE 469
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 126/448 (28%), Positives = 211/448 (47%), Gaps = 23/448 (5%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ +I +L + KAL G +LH ++ V+V +L++YAKC ++ ARK+FD
Sbjct: 210 SSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFD 269
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISACAGIQSLV 117
M RN VSWSAMI G+ + ALE F QM L P S + ACA + L
Sbjct: 270 VMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLS 329
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+G+++H Y +K G +GN+L+SMY K G DA+ + + VSF+A+++G V
Sbjct: 330 RGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCV 389
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+N +F++M G+ PD + G L CS L+ G H + ++
Sbjct: 390 QNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTL 449
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+ N ++ +YSK I A + F ++ D++SWN I + L +F ++
Sbjct: 450 ICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLA-L 508
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIR-----MRLNQDVGVGNALVNMYAKCG 352
G++PDD TF +L++C+ V G+ + R R+ + +V++ + G
Sbjct: 509 GLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCI----CMVDILGRAG 564
Query: 353 LISCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSALKLFEQMKATGIKPDSVTFI 408
LI ++ M +V W+ +++A H N LG K K + P+S
Sbjct: 565 LIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSK-----KIQSLGPESTGNF 619
Query: 409 GLLTACNHAGLVKEGEAYFNSMEKTYGI 436
LL+ A + A+ +K +G+
Sbjct: 620 VLLSNIYSAAGRWDDAAHIRITQKDWGL 647
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 90/180 (50%), Gaps = 2/180 (1%)
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
+ +L AC S+ K+IH H ++ N D V + L +Y C + + +LF+E+
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+ +V+ WN II A+A + A+ L+ M G++P+ T+ +L AC+ +++G
Sbjct: 70 PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG- 128
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRL 484
+S K +G+ D+ T L+D + G L+EA+ +D + +++ C L
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMS-HRDVVAWNAMIAGCSL 187
>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/547 (35%), Positives = 325/547 (59%), Gaps = 8/547 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I+S+L C++ +++ + LH+ + K G D VS+ ++N+Y+K G + L+ +VF EM
Sbjct: 351 TITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREM 410
Query: 64 -SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
S +NL W+ MIS Q+G A+E F +M L P+++ +S +S I SL G
Sbjct: 411 ESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSI---IDSLSLG 467
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ IH Y LK G + VG+SL +MY K G ++ V+ + + + VS+ ++I GF E+
Sbjct: 468 RLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEH 527
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
E+ ++F+ ML + + PD+ + L CS + L KG +H ++ ++ VG
Sbjct: 528 DHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVG 587
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ +YSK I A + F ++ +KD S ++ ++ + E L +F E+ +
Sbjct: 588 GALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRM-ADL 646
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
D FT +S++ A A L S+ G Q+HA + +M LN +V VG++LV MY+KCG I +K
Sbjct: 647 WIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHK 706
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F ++ +++SW +I ++A H G ALK+++ M+ G KPDSVTF+G+L+AC+H G+
Sbjct: 707 VFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGM 766
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V+EG ++ NSM K YGI P H+ C++DLLGR+G+L EAE + P+ D ++ G LL
Sbjct: 767 VEEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILL 826
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
+AC++ D+ +G AK++ L+P YV LSN+ A G W DV R +++ +G+KK
Sbjct: 827 AACKVHGDIELGRLAAKRVIELEPCEAGAYVTLSNICADMGWWEDVMKIRSLMEGTGVKK 886
Query: 540 EPSYSMI 546
EP +S +
Sbjct: 887 EPGWSSV 893
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 152/521 (29%), Positives = 260/521 (49%), Gaps = 51/521 (9%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+L C+ + L+ G + V+K G DV V +++LYAKC M A K F M
Sbjct: 250 TFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRM 309
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQ 120
RN+VSW+ +ISG Q + + A FF +M + N Y S ++AC + +
Sbjct: 310 PIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAV 369
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGE-AFEPNLVSFNALIAGFVEN 179
Q+H++ K G+ S V ++LI+MY K+G + V+ E NL + +I+ F ++
Sbjct: 370 QLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQS 429
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ E+F+ ML++GL PD+F + L S+ + L G ++HC +K L ++ VG
Sbjct: 430 GSTGRAVELFQRMLQEGLRPDKFCSSSVL---SIIDSLSLGRLIHCYILKIGLFTDISVG 486
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+++ +YSK + E+ F + +KD +SW + I S E+ + +F+EM + +
Sbjct: 487 SSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEE-I 545
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
RPD T + L AC+ L S++ GK++H + +R R+ ++V VG ALVNMY+KCG I + +
Sbjct: 546 RPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARR 605
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVT---FIG------- 409
+F+ + ++ S +++++ +A + AL LF +++ + DS T IG
Sbjct: 606 VFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNS 665
Query: 410 -------------------------LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFT 444
L+T + G + E F +EK PD+ +T
Sbjct: 666 LDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEK-----PDLISWT 720
Query: 445 CLIDLLGRAGKLLEA---EEYTKKFPLGQDPIVLGTLLSAC 482
+I + GK EA + +K D + +LSAC
Sbjct: 721 AMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSAC 761
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 247/490 (50%), Gaps = 21/490 (4%)
Query: 24 LHAAVLKMGI-QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
LHA LK I Q + ++N ++ Y K M+ A ++FD+ N++SW+ +ISG +Q
Sbjct: 67 LHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQNF 126
Query: 83 EHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
+ F +M PN++ + S +SAC + S + G+ +++ +LK G+ S +V
Sbjct: 127 SFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRA 186
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
+I ++ K+ DAL V+ + N+V +NA+I+G V+N++ ++F M + +P
Sbjct: 187 GMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMP 246
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
+ F+F+ L C+ +L G + +KC + FVG I+ LY+K + +A K F
Sbjct: 247 NSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEF 306
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+ ++++SW T I+ D FKEM G + +++T S+L AC +
Sbjct: 307 LRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEM-RKVGEKINNYTITSVLTACTEPVMI 365
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH-RNVVSWNTIIAA 378
+ Q+H+ + + D V +AL+NMY+K G++ S ++F EM +N+ W +I+A
Sbjct: 366 KEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISA 425
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISP 438
A G A++LF++M G++PD +L+ + L + Y + G+
Sbjct: 426 FAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSLSLGRLIHCYILKI----GLFT 481
Query: 439 DIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS----------ACRLRRDV 488
DI + L + + G L E+ ++ P +D + ++++ A +L R++
Sbjct: 482 DISVGSSLFTMYSKCGSLEESYTVFEQMP-DKDNVSWASMITGFSEHDHAEQAVQLFREM 540
Query: 489 VIGERLAKQL 498
++ E Q+
Sbjct: 541 LLEEIRPDQM 550
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 223/422 (52%), Gaps = 8/422 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C+ + G +++ LK G + V +++L+AK A +VF ++
Sbjct: 152 SVLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQDVLCE 211
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
N+V W+A+ISG + E+ +AL+ F QM +PN + F+S ++ACA ++ L G+ +
Sbjct: 212 NVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQ 271
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ +K G FVG ++I +Y K A+ + N+VS+ +I+GFV+
Sbjct: 272 GWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSI 331
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
F FK M + G + ++ L C+ +++ + LH K + V + ++
Sbjct: 332 SAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALI 391
Query: 244 ALYSKFNLIGEAEKAFRLIEE-KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+YSK ++ +E+ FR +E K+L W I+A + + + +F+ M + G+RPD
Sbjct: 392 NMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQE-GLRPD 450
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
F +S+L+ + S+ G+ IH +++++ L D+ VG++L MY+KCG + SY +F
Sbjct: 451 KFCSSSVLSI---IDSLSLGRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFE 507
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+M ++ VSW ++I + H A++LF +M I+PD +T LTAC+ +++
Sbjct: 508 QMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEK 567
Query: 423 GE 424
G+
Sbjct: 568 GK 569
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/579 (34%), Positives = 325/579 (56%), Gaps = 6/579 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S++ CS + LHA VLK D+I N ++++Y K +M A VF +
Sbjct: 201 TFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRI 260
Query: 64 SERNLVSWSAMISGHHQAGEHLLAL----EFFSQMHLLPNEYIFASAISACAGIQSLVKG 119
++L+SW +MI+G Q G L AL E SQ PNE++F SA SAC+ + G
Sbjct: 261 IIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCG 320
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+QIH +KFG S F G SL MY K G+ A V+ +P+LV++NA+IAGF
Sbjct: 321 RQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASV 380
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
++ F M GL+P+ + L CS L G+ +H VK + V
Sbjct: 381 SNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVC 440
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEK-DLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N+++++YSK + + +A + F I K D++SWNT + AC + L + K M
Sbjct: 441 NSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASR- 499
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
++PD T ++L + +AS + G QIH +++ LN D+ V NAL+NMY KCG + C+
Sbjct: 500 IKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECAR 559
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
K+F+ + + +++SW+++I +A G A +LF M+ G+KP+ +TF+G+LTAC+H G
Sbjct: 560 KMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIG 619
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
+V+EG + +M++ Y ISP EH +C++DLL RAG L AE++ ++ P D +V TL
Sbjct: 620 MVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTL 679
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L+AC++ ++ +G+R A+ + + P+ ++ V+L N++AS G W D A R ++ +
Sbjct: 680 LAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVG 739
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
K P S IE++ F + H + G+I ML+ L L
Sbjct: 740 KVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEELML 778
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 144/454 (31%), Positives = 253/454 (55%), Gaps = 7/454 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
L++ CS ++L+ G +H +L QPD+I+ NH+L++Y KCG + AR +FD M +N
Sbjct: 104 LINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKN 163
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHA 124
+VSW++MISG+ + GE A+ + QM +P+ + F S + +C+G+ +Q+HA
Sbjct: 164 VVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHA 223
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ LK + + N+LISMY K +DA+ V+ +L+S+ ++IAGF + +
Sbjct: 224 HVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELE 283
Query: 185 GFEVFKLMLRQGLL-PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
F+ ML Q + P+ F F CS + G +H L +K L S+ F G ++
Sbjct: 284 ALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLC 343
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K + A F IE+ DL++WN IA + ++ ++ S F +M + G+ P+D
Sbjct: 344 DMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHT-GLVPND 402
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T S+L AC+ + HG Q+H+++++M N D+ V N+L++MY+KC ++ + ++F +
Sbjct: 403 VTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFED 462
Query: 364 MLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+ ++ ++VSWNT++ A G L+L + M A+ IKPD VT +L + +
Sbjct: 463 IGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEV 522
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
G + K+ G++ DI LI++ + G L
Sbjct: 523 GSQIHCFIMKS-GLNLDISVSNALINMYTKCGSL 555
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/441 (28%), Positives = 221/441 (50%), Gaps = 8/441 (1%)
Query: 83 EHLLALEFFSQMHLLPNEYI-FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSL 141
E L A + F + P + + + I+AC+ ++SL G++IH + L Y + N +
Sbjct: 80 EALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHI 139
Query: 142 ISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDR 201
+SMY K G +A ++ N+VS+ ++I+G+ + + ++ MLR G +PD
Sbjct: 140 LSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDH 199
Query: 202 FSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRL 261
F+F ++ CS +D + LH +K + ++ N ++++Y+KF+ + +A F
Sbjct: 200 FTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSR 259
Query: 262 IEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQH 321
I KDLISW + IA S + L F+EM + +P++F F S +AC+ L
Sbjct: 260 IIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDC 319
Query: 322 GKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN 381
G+QIH I+ L D+ G +L +MYAKCG + + +F + ++V+WN IIA A+
Sbjct: 320 GRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFAS 379
Query: 382 HRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIE 441
+ F QM+ TG+ P+ VT + LL AC+ ++ G + + K G + DI
Sbjct: 380 VSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKM-GFNLDIP 438
Query: 442 HFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLF-- 499
L+ + + L +A + + D + TLL+AC + RL K +F
Sbjct: 439 VCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFAS 498
Query: 500 HLQPTTTSPYVLLSNLYASDG 520
++P +V L+N+ S G
Sbjct: 499 RIKPD----HVTLTNVLVSSG 515
>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
Length = 924
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/594 (35%), Positives = 324/594 (54%), Gaps = 33/594 (5%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+S+L C+ L+ G LHA LK D IV L++YAKC M A+++FD
Sbjct: 286 ASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSEN 345
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFF---SQMHLLPNEYIFASAISACAGIQSLVKGQQI 122
NL S++AMI+G+ Q AL F S+ L +E + A+ ACA ++ L +G Q+
Sbjct: 346 LNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQL 405
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H + K ++ V N+ I MY K +A V+ E + VS+NA+IA +N++
Sbjct: 406 HGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEER 465
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
K + MLR G+ PD ++F L+ C+ + L GM +H VK + SNP++G+++
Sbjct: 466 SKTLNILVSMLRSGMEPDEYTFGSVLKACA-GDSLNHGMEIHTTIVKLGMASNPYIGSSL 524
Query: 243 MALYSKFNLIGEAEKAF-----------------RLIEEKD----------LISWNTFIA 275
+ +YSK +I EAEK IEE ++SWN I+
Sbjct: 525 VDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIIS 584
Query: 276 ACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN 335
E F M + G+ PD FT++++L CA LAS+ GKQIHAH+I+ L
Sbjct: 585 GYVMRKQSEDAQRFFNRMM-EMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQ 643
Query: 336 QDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM 395
DV + + LV+MY+KCG + S +F + R+ V+WN +I +A+H +G A+KLFE M
Sbjct: 644 YDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLFESM 703
Query: 396 KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGK 455
I P+ TF+ LL AC H GLV+ G YF+ M+K YG+ P +EH++ ++D+LG++G+
Sbjct: 704 VLMNIMPNHATFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGE 763
Query: 456 LLEAEEYTKKFPLGQDPIVLGTLLSACRLRR-DVVIGERLAKQLFHLQPTTTSPYVLLSN 514
+ +A E ++ P D ++ TLLSAC++ R +V E A L L P +S Y+LLSN
Sbjct: 764 VEKALELIQEMPFEADDVIWRTLLSACKINRNNVEAAEVAANALLRLDPQDSSTYILLSN 823
Query: 515 LYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
+YA GMW + R ++ LKKEP S +E++ F F V + +H + EI
Sbjct: 824 IYADAGMWDKASELRTAMRSDKLKKEPGCSWVEIRDEFHTFLVGDKAHPRWKEI 877
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 145/499 (29%), Positives = 246/499 (49%), Gaps = 39/499 (7%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
KS S +L CS + + G +H L+MG DV+ + +L++YAKC ++ + VF
Sbjct: 182 KSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYA 241
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKG 119
M ++N +SWSA+I+G Q L+ F +M + ++ I+AS + +CA + L G
Sbjct: 242 MPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLG 301
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
Q+HA++LK + V + + MY K DA ++ + NL S+NA+I G+ +
Sbjct: 302 TQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQK 361
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ +F+ + + L D S +G L C+ L +G+ LH L K N V
Sbjct: 362 DNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICVA 421
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N + +Y K + EA + F + KD +SWN IAA + K L++ M G+
Sbjct: 422 NAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRS-GM 480
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
PD++TF S+L ACAG S+ HG +IH ++++ + + +G++LV+MY+KCG+I + K
Sbjct: 481 EPDEYTFGSVLKACAG-DSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEK 539
Query: 360 LFNEM---------------------------LHRNVVSWNTIIAAHANHRLGGSALKLF 392
+ N++ + +VSWN II+ + + A + F
Sbjct: 540 IHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFF 599
Query: 393 EQMKATGIKPDSVTFIGLLTACNH---AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
+M GI PD T+ +L C + GL K+ A+ E Y D+ + L+D+
Sbjct: 600 NRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQY----DVYICSTLVDM 655
Query: 450 LGRAGKLLEAEEYTKKFPL 468
+ G L ++ +K P+
Sbjct: 656 YSKCGNLHDSRLMFEKAPI 674
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 247/500 (49%), Gaps = 37/500 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S + C+K +A + G HA ++ G +P V VSN +L LY CG + A K+FD M
Sbjct: 51 NFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGM 110
Query: 64 SERNLVSWSAMI-------------------------------SGHHQAGEHLLALEFFS 92
R++VSW+AMI SG Q GE+L +++ F
Sbjct: 111 PLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFI 170
Query: 93 QMHLLPNEY---IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
+M E+ F+ + C+ +++ G QIH +L+ GY + G++L+ MY K
Sbjct: 171 EMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCK 230
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
++ V+ + N +S++A+IAG V+N + G ++FK M + G+ + +A L+
Sbjct: 231 RLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLK 290
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
C+ DLR G LH +K + V + +Y+K N + +A++ F + E +L S
Sbjct: 291 SCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQS 350
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
+N I S + + L +F+++S + D+ + + L ACA + + G Q+H
Sbjct: 351 YNAMITGYSQKDNGFRALLLFRKLSKS-SLGFDEISLSGALRACATVKGLSEGLQLHGLA 409
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
+ ++++ V NA ++MY KC + + ++F+EM ++ VSWN IIAAH + L
Sbjct: 410 TKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTL 469
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
+ M +G++PD TF +L AC L E + ++ +P I + L+D+
Sbjct: 470 NILVSMLRSGMEPDEYTFGSVLKACAGDSLNHGMEIHTTIVKLGMASNPYIG--SSLVDM 527
Query: 450 LGRAGKLLEAEEYTKKFPLG 469
+ G + EAE+ K +G
Sbjct: 528 YSKCGMIDEAEKIHNKIFIG 547
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/574 (35%), Positives = 327/574 (56%), Gaps = 7/574 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L CS ALQ G +H + + +V V V++++AKCG + AR++F+EM +R+
Sbjct: 139 VLKACSSLHALQLGRWVHET-MHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRD 197
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
L SW+A+I G GE L AL F +M L+P+ I AS + AC ++++ G +
Sbjct: 198 LASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQV 257
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+++ G+ S +V N++I MY K G +A V+ ++VS++ LIAG+ +N ++
Sbjct: 258 CAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQE 317
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
++++ M+ GL + L L++G +H +K L S+ VG+ ++
Sbjct: 318 SYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIV 377
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM-SNDHGVRPDD 303
+Y+ I EAE F +KD++ WN+ I + D+E F+ + +H RP+
Sbjct: 378 MYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEH--RPNF 435
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T SIL C + +++ GK+IH ++ + L +V VGN+L++MY+KCG + K+F +
Sbjct: 436 ITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQ 495
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M+ RNV ++NT+I+A +H G L +EQMK G +P+ VTFI LL+AC+HAGL+ G
Sbjct: 496 MMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHAGLLDRG 555
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
+NSM YGI P++EH++C++DL+GRAG L A ++ + P+ D V G+LL ACR
Sbjct: 556 WLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTPDANVFGSLLGACR 615
Query: 484 LRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSY 543
L V + E LA+++ L+ + YVLLSNLYAS W D++ R M+KD GL+K+P
Sbjct: 616 LHNKVELTELLAERILQLKADDSGHYVLLSNLYASGKRWEDMSKVRSMIKDKGLEKKPGS 675
Query: 544 SMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
S I+V F H +I L +L L
Sbjct: 676 SWIQVGHCIYVFHATSAFHPAFAKIEETLNSLLL 709
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 232/482 (48%), Gaps = 12/482 (2%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGI-QPDVIVSN----HVLNLYAKCGKMILARKVFDEM 63
H L + +LHA +L +G QP S+ ++N+Y G + A F +
Sbjct: 34 FHRLKSPPNLHEARTLHALLLVLGFFQPTCPHSSSFASQLVNVYVNFGSLQHAFLTFRAL 93
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ +++W+A++ G G A+ F+ M + P+ Y + + AC+ + +L G+
Sbjct: 94 PHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQLGR 153
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H A++ +V ++I M+ K G DA ++ E + +L S+ ALI G + N
Sbjct: 154 WVHETMHGKTKANV-YVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNG 212
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ + +F+ M +GL+PD A L C ++ GM L V+ ES+ +V N
Sbjct: 213 ECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSN 272
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y K EA + F + D++SW+T IA S Y++ ++ M N G+
Sbjct: 273 AVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINV-GLA 331
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ S+L A L ++ GK++H +++ L DV VG+AL+ MYA CG I + +
Sbjct: 332 TNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESI 391
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F ++++ WN++I + SA F ++ +P+ +T + +L C G +
Sbjct: 392 FECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGAL 451
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
++G+ + K+ G+ ++ LID+ + G LE E K + ++ T++S
Sbjct: 452 RQGKEIHGYVTKS-GLGLNVSVGNSLIDMYSKCG-FLELGEKVFKQMMVRNVTTYNTMIS 509
Query: 481 AC 482
AC
Sbjct: 510 AC 511
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 191/369 (51%), Gaps = 15/369 (4%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
++S+L C + +A++ G++L ++ G + D+ VSN V+++Y KCG + A +VF M
Sbjct: 236 VASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMV 295
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
++VSWS +I+G+ Q + + + + M L N + S + A ++ L +G++
Sbjct: 296 YSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKE 355
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H + LK G S VG++LI MY G +A ++ + +++ +N++I G+
Sbjct: 356 MHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGD 415
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
E F F+ + P+ + L IC+ LR+G +H K L N VGN+
Sbjct: 416 FESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNS 475
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +YSK + EK F+ + +++ ++NT I+AC EKGL+ +++M + G RP
Sbjct: 476 LIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEE-GNRP 534
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG------NALVNMYAKCGLIS 355
+ TF S+L+AC+ + G ++ +I D G+ + +V++ + G +
Sbjct: 535 NKVTFISLLSACSHAGLLDRGWLLYNSMI-----NDYGIEPNMEHYSCMVDLIGRAGDLD 589
Query: 356 CSYKLFNEM 364
+YK M
Sbjct: 590 GAYKFITRM 598
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 191/381 (50%), Gaps = 11/381 (2%)
Query: 86 LALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGY------ASISFVGN 139
+ + F Q H LP + S +L + + +HA L G+ S SF +
Sbjct: 14 MLITFTRQQHSLPIHFTVTS-FHRLKSPPNLHEARTLHALLLVLGFFQPTCPHSSSF-AS 71
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
L+++Y+ G A L + ++++NA++ G V K + ML+ G+ P
Sbjct: 72 QLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTP 131
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
D +++ L+ CS + L+ G +H T+ K ++N +V ++ +++K + +A + F
Sbjct: 132 DNYTYPLVLKACSSLHALQLGRWVH-ETMHGKTKANVYVQCAVIDMFAKCGSVEDARRMF 190
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+ ++DL SW I + + L +F++M ++ G+ PD ASIL AC L +V
Sbjct: 191 EEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSE-GLMPDSVIVASILPACGRLEAV 249
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
+ G + +R D+ V NA+++MY KCG ++++F+ M++ +VVSW+T+IA +
Sbjct: 250 KLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGY 309
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
+ + L + KL+ M G+ +++ +L A L+K+G+ N + K G+ D
Sbjct: 310 SQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKE-GLMSD 368
Query: 440 IEHFTCLIDLLGRAGKLLEAE 460
+ + LI + G + EAE
Sbjct: 369 VVVGSALIVMYANCGSIKEAE 389
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 50/225 (22%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+L C++ AL+QG +H V K G+ +V V N ++++Y+KCG + L KVF +M
Sbjct: 437 TVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQM 496
Query: 64 SERNLVSWSAMIS--GHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVK 118
RN+ +++ MIS G H GE LA F+ QM PN+ F S +SAC+
Sbjct: 497 MVRNVTTYNTMISACGSHGQGEKGLA--FYEQMKEEGNRPNKVTFISLLSACS------- 547
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALI----- 173
HA L G+ + NS+I+ Y EPN+ ++ ++
Sbjct: 548 ----HAGLLDRGW----LLYNSMINDY---------------GIEPNMEHYSCMVDLIGR 584
Query: 174 AGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLR 218
AG ++ +K + R + PD F L C + N +
Sbjct: 585 AGDLDG--------AYKFITRMPMTPDANVFGSLLGACRLHNKVE 621
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 191/557 (34%), Positives = 332/557 (59%), Gaps = 4/557 (0%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
+LHA V K+G D V +++ Y+ G + +AR VFD++ +++VSW+ M++ + +
Sbjct: 157 TLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENC 216
Query: 83 EHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
+ +L+ F+QM ++ PN + + A+ +C G+++ G+ +H +LK Y FVG
Sbjct: 217 FYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGI 276
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
+L+ +Y K G DA ++ E + +L+ ++ +IA + ++ + ++ ++F M + ++P
Sbjct: 277 ALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVP 336
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
+ F+FA L+ C+ S L G +H +K L SN FV N IM +Y+K I + K F
Sbjct: 337 NNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLF 396
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+ +++ ++WNT I D E+ +++F M +H ++P + T++S+L A A LA++
Sbjct: 397 EELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHML-EHDMQPTEVTYSSVLRASASLAAL 455
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
+ G QIH+ I+ N+D V N+L++MYAKCG I+ + F++M R+ VSWN +I +
Sbjct: 456 EPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGY 515
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
+ H + AL LF+ M+ T KP+ +TF+G+L+AC++AGL+ +G+A+F SM K Y I P
Sbjct: 516 SMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPC 575
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLF 499
IEH+TC++ LLGR G+ EA + + +V LL AC + + V +G A+ +
Sbjct: 576 IEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVL 635
Query: 500 HLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAE 559
++P + +VLLSN+YA+ G W +VA RK ++ ++KEP S +E QG F+V +
Sbjct: 636 EMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGD 695
Query: 560 FSHSKIGEINYMLKTLS 576
SH I I ML+ L+
Sbjct: 696 TSHPDIKLICAMLEWLN 712
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/444 (30%), Positives = 223/444 (50%), Gaps = 7/444 (1%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G LH +LK G D+ N +LN Y + + A K+FDEM + N +S+ + G+ +
Sbjct: 54 GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113
Query: 81 AGEHLLALEF----FSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF 136
+ AL F F + H + N ++F + + + +HA K G+ + +F
Sbjct: 114 DHQFHQALHFILRIFKEGHEV-NPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAF 172
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
VG +LI Y G A V+ + ++VS+ ++A + EN E+ ++F M G
Sbjct: 173 VGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMG 232
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
P+ F+ +G L+ C G +H +K + + FVG ++ LY+K I +A+
Sbjct: 233 YKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQ 292
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
+ F + + DLI W+ IA + ++ L +F M V P++FTFAS+L ACA
Sbjct: 293 RLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQT-SVVPNNFTFASVLQACASS 351
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
S+ GKQIH+ +++ LN +V V NA++++YAKCG I S KLF E+ RN V+WNTII
Sbjct: 352 VSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTII 411
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
+ G A+ LF M ++P VT+ +L A ++ G + KT
Sbjct: 412 VGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTM-Y 470
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAE 460
+ D LID+ + G++ +A
Sbjct: 471 NKDTVVANSLIDMYAKCGRINDAR 494
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 212/430 (49%), Gaps = 29/430 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+IS L C +A G S+H LK D+ V +L LYAK G++I A+++F+EM
Sbjct: 239 TISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEM 298
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+ +L+ WS MI+ + Q+ AL+ F +M ++PN + FAS + ACA SL G+
Sbjct: 299 PKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGK 358
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH+ LKFG S FV N+++ +Y K G +++ ++ E + N V++N +I G+V+
Sbjct: 359 QIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLG 418
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E+ +F ML + P +++ L + L G+ +H LT+K + V N
Sbjct: 419 DGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVAN 478
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +Y+K I +A F + ++D +SWN I S + L++F M + +
Sbjct: 479 SLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHT-DCK 537
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG----NALVNMYAKCGLISC 356
P+ TF +L+AC+ + G+ AH M + D+ +V + + G
Sbjct: 538 PNKLTFVGVLSACSNAGLLYKGQ---AHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDE 594
Query: 357 SYKLFNEMLHR-NVVSWNTIIAAHANHR---LGGSALK--------------LFEQMKAT 398
+ KL E+ ++ +V+ W ++ A H+ LG + L M AT
Sbjct: 595 AMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYAT 654
Query: 399 GIKPDSVTFI 408
+ D+V F+
Sbjct: 655 AGRWDNVAFV 664
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 200/568 (35%), Positives = 319/568 (56%), Gaps = 10/568 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L C K K L +H ++K ++ + V N++L++Y +CG++ AR VFD + +++
Sbjct: 34 VLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALVKKS 93
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
SW+AMI+G+ + A+ F +M + PN + + ACA + +L G+++HA
Sbjct: 94 GASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHA 153
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
G S VG +L+ MY K G ++A ++ +++S+ +I + Q
Sbjct: 154 CIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYA---QSGN 210
Query: 185 GFEVFKLMLR---QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
G E ++LML+ +G P+ ++ L C+ L+ +H + LE + VG
Sbjct: 211 GKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTA 270
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y+K I +A F ++ +D++SWN I A + + +F +M + G +P
Sbjct: 271 LVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTE-GCKP 329
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D F SIL ACA +++ K+IH H + L DV VG ALV+MY+K G I + +F
Sbjct: 330 DAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVF 389
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ M RNVVSWN +I+ A H LG AL++F +M A G+KPD VTF+ +L+AC+HAGLV
Sbjct: 390 DRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVD 449
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
EG + + +M + YGI PD+ H C++DLLGRAG+L+EA+ + + D G LL +
Sbjct: 450 EGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGS 509
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
CR +V +GE +AK+ L P + YVLLSN+YA G W V+ R M+++ G++KEP
Sbjct: 510 CRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMRERGIRKEP 569
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEIN 569
S IEV F VA+ SH + EIN
Sbjct: 570 GRSWIEVDNKIHDFLVADSSHPECKEIN 597
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 192/368 (52%), Gaps = 2/368 (0%)
Query: 93 QMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSS 152
Q L+ + +++ + C + L+ +Q+H +K + V N+L+ +Y++ G
Sbjct: 21 QRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQ 80
Query: 153 DALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
+A V+ + + S+NA+IAG+VE++ E +F+ M +G+ P+ ++ L+ C+
Sbjct: 81 EARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACA 140
Query: 213 VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNT 272
+ L+ G +H LES+ VG ++ +Y K I EA + F + D+ISW
Sbjct: 141 SLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTV 200
Query: 273 FIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
I A + + ++ + +M + G +P+ T+ SIL ACA +++ K++H H +
Sbjct: 201 MIGAYAQSGNGKEAYRLMLQMEQE-GFKPNAITYVSILNACASEGALKWVKRVHRHALDA 259
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
L DV VG ALV MYAK G I + +F+ M R+VVSWN +I A A H G A LF
Sbjct: 260 GLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLF 319
Query: 393 EQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
QM+ G KPD++ F+ +L AC AG + E + G+ D+ T L+ + +
Sbjct: 320 LQMQTEGCKPDAIMFLSILNACASAGAL-EWVKKIHRHALDSGLEVDVRVGTALVHMYSK 378
Query: 453 AGKLLEAE 460
+G + +A
Sbjct: 379 SGSIDDAR 386
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 149/269 (55%), Gaps = 4/269 (1%)
Query: 193 LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI 252
L++GL+ D F + L+ C DL +H +K ++E N V N ++ +Y + +
Sbjct: 20 LQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRL 79
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
EA F + +K SWN IA E + +F+EM ++ GV+P+ T+ IL A
Sbjct: 80 QEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHE-GVQPNAGTYMIILKA 138
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
CA L++++ GK++HA + L DV VG AL+ MY KCG I+ + ++F+ +++ +++SW
Sbjct: 139 CASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISW 198
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE-GEAYFNSME 431
+I A+A G A +L QM+ G KP+++T++ +L AC G +K + ++++
Sbjct: 199 TVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALD 258
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
G+ D+ T L+ + ++G + +A
Sbjct: 259 A--GLELDVRVGTALVQMYAKSGSIDDAR 285
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 194/419 (46%), Gaps = 58/419 (13%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L+ C+ AL+ +H L G++ DV V ++ +YAK G + AR VFD M R
Sbjct: 235 SILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVR 294
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIH 123
++VSW+ MI + G A + F QM P+ +F S ++ACA +L ++IH
Sbjct: 295 DVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIH 354
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
++L G VG +L+ MY K G DA +V+ N+VS+NA+I+G ++ +
Sbjct: 355 RHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQ 414
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILH-CLTVKCKLESNPFVGNTI 242
EVF+ M G+ PDR +F L CS + + +G + +T +E + N +
Sbjct: 415 DALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCM 474
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +L+G +A RL+E K I ++ V PD
Sbjct: 475 V------DLLG---RAGRLMEAKLFI--------------------------DNMAVDPD 499
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLN-QDVGVGNALVNMYAKCGLISCSYKLF 361
+ T+ ++L +C +V+ G+ + R++L+ ++ L N+YA+ G +
Sbjct: 500 EATWGALLGSCRTYGNVELGELVAKE--RLKLDPKNAATYVLLSNIYAEAGKWDMVSWVR 557
Query: 362 NEMLHRNV-----VSW-------NTIIAAHANH----RLGGSALKLFEQMKATGIKPDS 404
M R + SW + + A ++H + S K+ E++KA G PD+
Sbjct: 558 TMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIEKIKAEGYIPDT 616
>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 796
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 183/568 (32%), Positives = 326/568 (57%), Gaps = 12/568 (2%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
CS+ L++G ++HA + GI V VSN ++++YA+CG M AR+VFD ER+ VSW
Sbjct: 124 CSRAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSW 183
Query: 72 SAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK--GQQIHAYS 126
+A++SG+ +AG L F+ M + N + S I CAG V +H
Sbjct: 184 NALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCV 243
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP---- 182
+K G+ S F+ ++++ MY K G S+A+ ++ +PN+V FNA+IAG ++
Sbjct: 244 VKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTD 303
Query: 183 --EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ ++ + +G+ P F+F+ + C+++ D+ G +H +K + + F+G+
Sbjct: 304 VLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGS 363
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ LY + + + F + ++D+++W I+ C +E+ L++F E+ G++
Sbjct: 364 ALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLG-AGLK 422
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD FT +S++ ACA LA + G+QI + + +GN+ ++MYA+ G + + +
Sbjct: 423 PDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRR 482
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F EM ++VSW+ +I++HA H AL+ F +M + P+ +TF+G+LTAC+H GLV
Sbjct: 483 FQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLV 542
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG Y+ +M++ Y +SP I+H TC++DLLGRAG+L +AE + + +P++ +LL+
Sbjct: 543 DEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLA 602
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
+CR+ RD+ G+ +A ++ LQP++++ YV L N+Y G + R ++K+ G+KKE
Sbjct: 603 SCRIHRDMERGQLVADRIMELQPSSSASYVNLYNIYLDAGELSLASKIRDVMKERGVKKE 662
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
P S IE++ F + SH + I
Sbjct: 663 PGLSWIELRSGVHSFVAGDKSHPESNAI 690
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 226/430 (52%), Gaps = 19/430 (4%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
LHH A + ++HA +++ P + + N +L Y + G AR++ DEM N
Sbjct: 21 LHHLRSCSAPRHAAAVHAHIVRAHPSPSLFLRNTLLAAYCRLGGH--ARRLLDEMPRTNA 78
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQQIHA 124
VS++ +I + +AG+ +LE F++ + + + +A+A++AC+ L +G+ +HA
Sbjct: 79 VSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHA 138
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
S+ G A FV NSL+SMY + G A V+ A E + VS+NAL++G+V +
Sbjct: 139 LSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDD 198
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSND--LRKGMILHCLTVKCKLESNPFVGNTI 242
VF +M R G+ + F+ ++ C+ S+D + +H VK +S+ F+ + +
Sbjct: 199 MLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAM 258
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD--------YEKGLSVFKEMS 294
+ +Y+K + EA F+ + + +++ +N IA C D + LS++ E+
Sbjct: 259 VGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGL--CRDEAAVGTDVLREALSLYSEVQ 316
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
+ G+ P +FTF+S++ AC ++ GKQIH +++ D +G+AL+++Y G +
Sbjct: 317 S-RGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCM 375
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
++ F + ++VV+W +I+ + L AL LF ++ G+KPD T ++ AC
Sbjct: 376 EDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNAC 435
Query: 415 NHAGLVKEGE 424
+ + GE
Sbjct: 436 ASLAVARTGE 445
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 143/289 (49%), Gaps = 7/289 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS++ C+ ++ G +H VLK Q D + + +++LY G M + F +
Sbjct: 326 TFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSV 385
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
++++V+W+AMISG Q AL F ++ L P+ + +S ++ACA + G+
Sbjct: 386 PKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGE 445
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QI ++ K G+ + +GNS I MY + G A+ + E ++VS++A+I+ ++
Sbjct: 446 QIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHG 505
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
F M+ ++P+ +F G L CS + +G+ + T+K + +P + +
Sbjct: 506 CARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYY-ETMKEEYALSPTIKH 564
Query: 241 --TIMALYSKFNLIGEAEKAFR-LIEEKDLISWNTFIAACSHCADYEKG 286
++ L + + +AE R I + + W + +A+C D E+G
Sbjct: 565 CTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRDMERG 613
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 124/268 (46%), Gaps = 5/268 (1%)
Query: 218 RKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC 277
R +H V+ + F+ NT++A Y + L G A + + + +S+N I A
Sbjct: 31 RHAAAVHAHIVRAHPSPSLFLRNTLLAAYCR--LGGHARRLLDEMPRTNAVSFNLLIDAY 88
Query: 278 SHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD 337
S E L F GVR D FT+A+ LAAC+ ++ GK +HA + +
Sbjct: 89 SRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGG 148
Query: 338 VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA 397
V V N+LV+MYA+CG + + ++F+ R+ VSWN +++ + L++F M+
Sbjct: 149 VFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRR 208
Query: 398 TGIKPDSVTFIGLLTACNHA-GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+GI +S ++ C + V + A + G D+ + ++ + + G L
Sbjct: 209 SGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGAL 268
Query: 457 LEAEEYTKKFPLGQDPIVLGTLLSA-CR 483
EA K L + +V +++ CR
Sbjct: 269 SEAVALFKSV-LDPNVVVFNAMIAGLCR 295
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 200/569 (35%), Positives = 324/569 (56%), Gaps = 11/569 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S+ L C +T L+ G +HA + G+ V+++N ++++Y KCG++ AR VF+
Sbjct: 43 TFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESA 102
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAG--IQSLVK 118
E + VSW+++I+G+ + G + L +M L N Y SA+ AC S+
Sbjct: 103 DELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIEC 162
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ +H ++K G VG +L+ Y K+G DA ++ +PN+V +NA+IAGF++
Sbjct: 163 GKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQ 222
Query: 179 NQQPEKGFE-----VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE 233
+ F +F M +G+ P F+F+ L+ CS G +H K L+
Sbjct: 223 METMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQ 282
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
S+ F+GN ++ LYS I + K F + D++SW + I +E GL++F E+
Sbjct: 283 SDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHEL 342
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
G +PD+FT + +L+ACA LA+V+ G+QIHA+ I+ + + N+ + MYAKCG
Sbjct: 343 LFS-GRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGD 401
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
I + F E + ++VSW+ +I+++A H A+ LFE MK +GI P+ +TF+G+L A
Sbjct: 402 IDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVA 461
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C+H GLV+EG YF M+K +GI+P+++H C++DLLGRAG+L EAE + DP+
Sbjct: 462 CSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPV 521
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
+ +LLSACR+ + G+R+A+++ L+P + YVLL N+Y G+ R ++K
Sbjct: 522 MWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMK 581
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
D G+KKEP S IEV F + SH
Sbjct: 582 DRGVKKEPGLSWIEVGNVVHSFVAGDRSH 610
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 128/394 (32%), Positives = 205/394 (52%), Gaps = 16/394 (4%)
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
M +RN+VSW+++ISG+ Q G + + F + L +++ F++A+S C L G
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ IHA G + NSLI MY K G A LV+ A E + VS+N+LIAG+V
Sbjct: 61 RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC--SVSNDLRKGMILHCLTVKCKLESNPF 237
++ + MLR GL + ++ L+ C + S+ + G +LH VK L+ +
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 180
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA---CSHCAD--YEKGLSVFKE 292
VG ++ Y+K + +A K F+L+ + +++ +N IA AD + + +F E
Sbjct: 181 VGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFE 240
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
M + G++P +FTF+SIL AC+ + + + GKQIHA + + L D +GNALV +Y+ G
Sbjct: 241 MQS-RGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSG 299
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
I K F+ +VVSW ++I H + L LF ++ +G KPD T +L+
Sbjct: 300 SIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLS 359
Query: 413 ACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCL 446
AC + VK GE Y I I +FT +
Sbjct: 360 ACANLAAVKSGEQI-----HAYAIKTGIGNFTII 388
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 196/517 (37%), Positives = 304/517 (58%), Gaps = 5/517 (0%)
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKG 119
M +RNLVSW+AMISG Q + A+ F M + +P ++ F+SAI ACA + S+ G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+H +LKFG S FVG++L MY K G DA V+ E + VS+ A+I G+ +
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ E+ FK M+ + + D+ L C + G +H VK ES+ FVG
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEE-KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N + +YSK + A F + E ++++S+ I EKGLSVF E+ G
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRR-QG 239
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ P++FTF+S++ ACA A+++ G Q+HA ++++ ++D V + LV+MY KCGL+ +
Sbjct: 240 IEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAI 299
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+ F+E+ ++WN++++ H LG A+K+FE+M G+KP+++TFI LLT C+HAG
Sbjct: 300 QAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAG 359
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV+EG YF SM+KTYG+ P EH++C+IDLLGRAG+L EA+E+ + P + +
Sbjct: 360 LVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSF 419
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L ACR+ D +G+ A++L L+P + VLLSN+YA++ W DV R ++D +K
Sbjct: 420 LGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVK 479
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
K P YS ++V F ++SH + I L TL
Sbjct: 480 KLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTL 516
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 207/394 (52%), Gaps = 16/394 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS + C+ +++ G +H LK GI ++ V +++ ++Y+KCG M A KVF+EM
Sbjct: 43 AFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEM 102
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
++ VSW+AMI G+ + GE AL F +M + ++++ S + AC +++ G+
Sbjct: 103 PCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGR 162
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE-PNLVSFNALIAGFVEN 179
+H+ +K G+ S FVGN+L MY K G A V+G E N+VS+ LI G+VE
Sbjct: 163 SVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVET 222
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+Q EKG VF + RQG+ P+ F+F+ ++ C+ L +G LH +K + +PFV
Sbjct: 223 EQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS 282
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+ ++ +Y K L+ +A +AF I + I+WN+ ++ + + +F+ M D GV
Sbjct: 283 SILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMV-DRGV 341
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG----NALVNMYAKCGLIS 355
+P+ TF S+L C+ V+ G + M V G + ++++ + G +
Sbjct: 342 KPNAITFISLLTGCSHAGLVEEGLD---YFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLK 398
Query: 356 CSYKLFNEM-LHRNVVSWNTIIAA---HANHRLG 385
+ + N M N W + + A H + +G
Sbjct: 399 EAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMG 432
>gi|225445472|ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial [Vitis vinifera]
Length = 773
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 208/587 (35%), Positives = 340/587 (57%), Gaps = 18/587 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +++L CS + G LH+ +LK G+ +V V N ++ +Y++C +++ AR+VFD
Sbjct: 176 AVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRVFD 235
Query: 62 EMSERNLVSWSAMISGHHQAGEH-LLALEFFSQM---HLLPNEYIFASAISACAGIQSLV 117
EM ++LVSW+AM+SG+ Q G L A+ F +M + + F AISAC +
Sbjct: 236 EMRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFE 295
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+QIH+ ++K GY + V N LIS Y K DA LV+ + N+VS+ +I+
Sbjct: 296 LGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMIS--- 352
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
E +F M R G+ P+ +F G + ++ N + +G ++H + VK S
Sbjct: 353 --ISEEDATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELN 410
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N+++ +Y+KF + ++ K F + +++ISWN+ I+ + +++ L F +S
Sbjct: 411 VSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTF--LSALM 468
Query: 298 GVRPDDFTFASILA--ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
RP++FTF S+L+ A A S++HG++ H+H++++ LN + V +AL++MYAK G I
Sbjct: 469 ESRPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSIC 528
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
S +F+E +N V+W II+AHA H + + LF+ M+ G+KPDS+TF+ ++TAC
Sbjct: 529 ESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACG 588
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
G+V G FNSM K + I P EH++ ++D+LGRAG+L EAEE+ + P G VL
Sbjct: 589 RKGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQIPGGAGLSVL 648
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
+LL ACR+ +V + +R+A L ++P + YVL+SNLYA G W VA RK +++
Sbjct: 649 QSLLGACRIHGNVDMAKRVADDLIEMEPMGSGSYVLMSNLYAEKGEWEKVAKIRKGMRER 708
Query: 536 GLKKEPSYSMIEVQGTFEKFTVAEFS-----HSKIGEINYMLKTLSL 577
G++KE +S ++V + FS H + EI M +TL L
Sbjct: 709 GVRKEIGFSWVDVGDADGSLYLHGFSSDDKFHPQSEEIYRMAETLGL 755
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/486 (27%), Positives = 248/486 (51%), Gaps = 24/486 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++ +L C L G +HA + G V V N ++N+Y K G A VF+ +
Sbjct: 82 TVAIVLKACCGDSKL--GCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENL 139
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQ 120
+ ++VSW+ ++SG ++ + AL F +M+ + + ++ C+ + + G
Sbjct: 140 NNPDIVSWNTVLSGFQRSDD---ALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGF 196
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H+ LK G FVGN+LI+MY + +A V+ E +LVS+NA+++G+ Q
Sbjct: 197 QLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYA--Q 254
Query: 181 QPEKGFE---VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ G E VF ML++G+ D SF G + C + G +H L VK +++
Sbjct: 255 EGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVK 314
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N +++ YSK I +A+ F I +++++SW T I+ E S+F EM D
Sbjct: 315 VCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISISE-----EDATSLFNEMRRD- 368
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
GV P+D TF ++ A V+ G+ IH ++ ++ V N+L+ MYAK +S S
Sbjct: 369 GVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDS 428
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
K+F E+ +R ++SWN++I+ +A + L AL+ F +P+ TF +L++ A
Sbjct: 429 MKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALMES-RPNEFTFGSVLSSIASA 487
Query: 418 GLV--KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
+ + G+ + + K G++ + + L+D+ + G + E+ + PL ++ +
Sbjct: 488 EAISMRHGQRCHSHILK-LGLNTNPIVSSALLDMYAKRGSICESLGVFSETPL-KNEVAW 545
Query: 476 GTLLSA 481
++SA
Sbjct: 546 TAIISA 551
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 122/237 (51%), Gaps = 9/237 (3%)
Query: 184 KGFEVFKLMLRQGLLP--DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ ++FK L+ G + D+ + A L+ C D + G +H + S+ V N+
Sbjct: 61 EALDLFKKQLQWGFVGNIDQVTVAIVLKACC--GDSKLGCQIHAFAISSGFISHVTVPNS 118
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+M +Y K L A F + D++SWNT ++ D F N GV
Sbjct: 119 LMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQRSDDALN----FALRMNFTGVAF 174
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D T ++LA C+ G Q+H+ +++ L+ +V VGNAL+ MY++C + + ++F
Sbjct: 175 DAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRVF 234
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGG-SALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+EM ++++VSWN +++ +A G A+ +F +M G+K D V+F G ++AC H
Sbjct: 235 DEMRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHG 291
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 194/569 (34%), Positives = 331/569 (58%), Gaps = 11/569 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S + +L C + K G +H + G+ V ++N ++++Y KC ++ AR +F+
Sbjct: 112 SYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESS 171
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISAC-AGIQSLVK- 118
E + VSW+++I+G+ + G + L+ +MH L N + SA+ +C + ++V
Sbjct: 172 DELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSY 231
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ +H Y++K G VG +L+ MY K GY DA+ ++ + N+V +NA+IAGF++
Sbjct: 232 GKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQ 291
Query: 179 NQQPEK--GFEVFKL---MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE 233
+ +K +E KL M RQG+ P F+F+ ++IC+ G +H K ++
Sbjct: 292 TEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQ 351
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
S+ F+G+T++ LYS + K F + D++SW T IA + +E L++F E+
Sbjct: 352 SDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYEL 411
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
G +PD+F ++L+ACA +A+ + G+Q+H + ++ + V N+ ++MYAK G
Sbjct: 412 LAS-GKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGN 470
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ + F E+ + +VVSW+ +I ++A H A+ LFE MK+ GI P+ +TF+G+LTA
Sbjct: 471 LDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTA 530
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C+H GLV+EG Y+ SM+K Y + +++H TC++DLL RAG+LL+A+ + G P+
Sbjct: 531 CSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPV 590
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
+ TLLS CR+ +D+V G+ +A++L L P +S YVLL N+Y G+ R+++K
Sbjct: 591 MWRTLLSGCRIYKDIVTGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIRELMK 650
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
D G++KEP S IEV F V + SH
Sbjct: 651 DRGIRKEPGQSWIEVGNEVHSFVVGDISH 679
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 135/429 (31%), Positives = 229/429 (53%), Gaps = 11/429 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+ L+ SK+ + G HA ++K P + + N+ LNLY+K G+M A+K+FD MSE
Sbjct: 13 TKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMSE 72
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
R+++S++ +ISG+ G + A+ FS+ L +++ +A +SAC I+ G+ I
Sbjct: 73 RSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKVI 132
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H ++ G F+ N LI MY K A L++ + E + VS+N+LI G+
Sbjct: 133 HGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAY 192
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEIC--SVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E+ ++ M GL + F+ L+ C +++N + G LH TVK L+ + VG
Sbjct: 193 EEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGT 252
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEK-----GLSVFKEMSN 295
++ +Y+K +G+A + FR ++++ +N IA D +K L +F +M
Sbjct: 253 ALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQR 312
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
G++P DFTF+SI+ C + + ++GKQIHAH+ + + D +G+ L+ +Y+ G
Sbjct: 313 -QGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTE 371
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
K FN ++VSW T+IA +A + SAL LF ++ A+G KPD +L+AC
Sbjct: 372 DQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACA 431
Query: 416 HAGLVKEGE 424
+ GE
Sbjct: 432 DVAAERSGE 440
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 9/293 (3%)
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
D ++ ++ S S G + H +K F+ N + LYSK+ +G A+K F
Sbjct: 8 DSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLF 67
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+ E+ +IS+N I+ Y K + +F E + ++ D F++A +L+AC +
Sbjct: 68 DRMSERSVISYNILISGYGGMGFYHKAIGLFSE-ARMACLKLDKFSYAGVLSACGQIKDF 126
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
GK IH I L Q V + N L++MY KC I + LF + VSWN++I +
Sbjct: 127 ALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGY 186
Query: 380 ANHRLGG--SALKLFEQMKATGIKPDSVTFIGLLTAC--NHAGLVKEGEAYFNSMEKTYG 435
A R+G LKL +M TG++ ++ T L +C N +V G+ K G
Sbjct: 187 A--RVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQ-G 243
Query: 436 ISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDV 488
+ DI T L+D+ + G L +A + + P Q+ ++ +++ D+
Sbjct: 244 LDLDIVVGTALLDMYAKTGYLGDAIQLFRTSP-NQNVVMYNAMIAGFIQTEDI 295
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 210/579 (36%), Positives = 326/579 (56%), Gaps = 12/579 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+S+L C+ + L+ G LH+A++K ++ V+N ++++YAK G + A K F+ M+
Sbjct: 322 TSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTY 381
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQI 122
R+ +SW+A+I G+ Q A F +M L +P+E AS +SAC I+ L GQQ
Sbjct: 382 RDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQF 441
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H S+K G + F G+SLI MY K G DA Y E ++VS NALIAG+
Sbjct: 442 HCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKNTK 501
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE-SNPFVGNT 241
E + M GL P +FA +++C S + G+ +HC VK L + F+G +
Sbjct: 502 E-SINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTS 560
Query: 242 IMALYSKFNLIGEAEKAFRLIEE-KDLISWNTFIAA--CSHCADYEKGLSVFKEMSNDHG 298
++ +Y + +A F K ++ W I+ + C+D L++++EM D+
Sbjct: 561 LLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDV--ALNLYREM-RDNN 617
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ PD TF ++L ACA L+S+ G++IH+ + + D +ALV+MYAKCG + S
Sbjct: 618 ISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSV 677
Query: 359 KLFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++F E+ ++V+SWN++I A + ALK+F++M + I PD VTF+G+LTAC+HA
Sbjct: 678 QVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHA 737
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
G V EG F+ M YGI P ++H+ C++DLLGR G L EAEE+ K + + ++
Sbjct: 738 GWVYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIWAN 797
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL ACR+ D G+R AK+L L+P ++SPYVLLSN+YA+ G W + R+ + +
Sbjct: 798 LLGACRIHGDEKRGQRAAKKLIELEPQSSSPYVLLSNMYAASGNWDEARSLRRTMIKKDI 857
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
+K P S I V F + SHS EI+ LK L+
Sbjct: 858 QKIPGCSWIVVGQETNLFVAGDISHSSYDEISKALKHLT 896
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 144/485 (29%), Positives = 256/485 (52%), Gaps = 16/485 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++S+L + AL G+ +HA +K G + + V++ ++N+Y KC AR+VFD +
Sbjct: 219 TLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAI 278
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
S++N++ W+AM+ + Q G +E F M + P+E+ + S +S CA + L G+
Sbjct: 279 SQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGR 338
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE----PNLVSFNALIAGF 176
Q+H+ +K + S FV N+LI MY K G AL G+ FE + +S+NA+I G+
Sbjct: 339 QLHSAIIKKRFTSNLFVNNALIDMYAKAG----ALKEAGKHFEHMTYRDHISWNAIIVGY 394
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
V+ + F +F+ M+ G++PD S A L C L G HCL+VK LE+N
Sbjct: 395 VQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNL 454
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
F G++++ +YSK I +A K + + E+ ++S N IA + + ++ +++ EM
Sbjct: 455 FAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYA-LKNTKESINLLHEM-QI 512
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLI-RMRLNQDVGVGNALVNMYAKCGLIS 355
G++P + TFAS++ C G A V G QIH ++ R L +G +L+ MY ++
Sbjct: 513 LGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLA 572
Query: 356 CSYKLFNEMLH-RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ LF+E +++V W +I+ H + AL L+ +M+ I PD TF+ +L AC
Sbjct: 573 DANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQAC 632
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
+ +G + + T G D + L+D+ + G + + + ++ +D I
Sbjct: 633 ALLSSLHDGREIHSLIFHT-GFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVIS 691
Query: 475 LGTLL 479
+++
Sbjct: 692 WNSMI 696
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/465 (26%), Positives = 228/465 (49%), Gaps = 43/465 (9%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
L C+K + L G ++H+ V+K G++ +++LYAKC + AR +F +L
Sbjct: 54 LSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHL 113
Query: 69 --VSWSAMISGHHQAGEHLLALEFFSQMH--LLPNEYIFASAISACAGIQSLVKGQQIHA 124
VSW+A+ISG+ QAG AL F +M +P++ + ++A
Sbjct: 114 HTVSWTALISGYVQAGLPHEALHIFDKMRNSAVPDQVALVTVLNA--------------- 158
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEP--NLVSFNALIAGFVENQQP 182
Y+ +G DA ++ + P N+V++N +I+G +
Sbjct: 159 --------------------YISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHY 198
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E+ F M + G+ R + A L + L G+++H +K ES+ +V +++
Sbjct: 199 EEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSL 258
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y K + +A + F I +K++I WN + S + +F +M + G+ PD
Sbjct: 259 INMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMIS-CGIHPD 317
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+FT+ SIL+ CA ++ G+Q+H+ +I+ R ++ V NAL++MYAK G + + K F
Sbjct: 318 EFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFE 377
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
M +R+ +SWN II + + A LF +M GI PD V+ +L+AC + +++
Sbjct: 378 HMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEA 437
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
G+ F+ + G+ ++ + LID+ + G + +A + P
Sbjct: 438 GQQ-FHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMP 481
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 204/417 (48%), Gaps = 50/417 (11%)
Query: 71 WSAMISG-HHQAGEHLLAL--EFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSL 127
W+ + G H + E +L F + H P+++ FA +SACA +Q+L G+ +H+ +
Sbjct: 16 WNWRVQGTKHYSSERVLQFYASFMNSGHS-PDQFTFAVTLSACAKLQNLHLGRAVHSCVI 74
Query: 128 KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNL--VSFNALIAGFVENQQPEKG 185
K G S SF +LI +Y K + A ++ A P+L VS+ ALI+G+V+ P +
Sbjct: 75 KSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEA 134
Query: 186 FEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMAL 245
+F M R +PD+ + T++
Sbjct: 135 LHIFDKM-RNSAVPDQVALV-----------------------------------TVLNA 158
Query: 246 YSKFNLIGEAEKAFRL--IEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
Y + +A + F+ I +++++WN I+ + A YE+ L+ F +MS HGV+
Sbjct: 159 YISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSK-HGVKSSR 217
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T AS+L+A A LA++ HG +HAH I+ + V ++L+NMY KC + + ++F+
Sbjct: 218 STLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDA 277
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
+ +N++ WN ++ ++ + + ++LF M + GI PD T+ +L+ C ++ G
Sbjct: 278 ISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVG 337
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA----EEYTKKFPLGQDPIVLG 476
+++ K + ++ LID+ +AG L EA E T + + + I++G
Sbjct: 338 RQLHSAIIKKR-FTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVG 393
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 195/572 (34%), Positives = 324/572 (56%), Gaps = 5/572 (0%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L CS A++ G+ +H+ G++ DV V +++ YAKCG ++ A+++F MS R+
Sbjct: 115 VLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRD 174
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
+V+W+AMI+G G A++ QM + PN + ++L G+ +H
Sbjct: 175 VVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHG 234
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
Y ++ + + VG L+ MY K A ++ N VS++A+I G+V + ++
Sbjct: 235 YCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKE 294
Query: 185 GFEVF-KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
E+F +++L+ + P + L C+ DL +G LHC +K + +GNT++
Sbjct: 295 ALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLL 354
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
++Y+K +I +A + F + KD +S++ ++ C + LS+F+ M G+ PD
Sbjct: 355 SMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLS-GIDPDL 413
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T +L AC+ LA++QHG H +LI D + NAL++MY+KCG IS + ++FN
Sbjct: 414 TTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNR 473
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M ++VSWN +I + H LG AL LF + A G+KPD +TFI LL++C+H+GLV EG
Sbjct: 474 MDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEG 533
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
+F++M + + I P +EH C++D+LGRAG + EA + + P D + LLSACR
Sbjct: 534 RLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACR 593
Query: 484 LRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSY 543
+ +++ +GE ++K++ L P +T +VLLSN+Y++ G W D A R KD GLKK P
Sbjct: 594 IHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGC 653
Query: 544 SMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S IE+ G F + SH ++ +IN L+ L
Sbjct: 654 SWIEINGIVHAFVGGDQSHLQLSQINRKLEEL 685
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 234/457 (51%), Gaps = 4/457 (0%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C ++K+L + +H LK D V + + LY C +++LAR++FDE+ +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 68 LVSWSAMISGHHQAGEHLLALEFF-SQMHL--LPNEYIFASAISACAGIQSLVKGQQIHA 124
++ W+ +I + G A++ + S +HL PN+Y + + AC+G+ ++ G +IH+
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
++ FG S FV +L+ Y K G +A ++ ++V++NA+IAG +
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
++ M +G+ P+ + G L + L G LH V+ ++ VG ++
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLD 253
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y+K + A K F ++ ++ +SW+ I ++ L +F +M + P
Sbjct: 254 MYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPV 313
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T S+L ACA L + G+++H ++I++ D+ +GN L++MYAKCG+I + + F+EM
Sbjct: 314 TLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEM 373
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
++ VS++ I++ + AL +F M+ +GI PD T +G+L AC+H ++ G
Sbjct: 374 NPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGF 433
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ G + D LID+ + GK+ A E
Sbjct: 434 CSHGYL-IVRGFATDTLICNALIDMYSKCGKISFARE 469
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 212/448 (47%), Gaps = 23/448 (5%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ +I +L + KAL G +LH ++ V+V +L++YAKC ++ ARK+FD
Sbjct: 210 SSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFD 269
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISACAGIQSLV 117
M RN VSWSAMI G+ + ALE F QM L P S + ACA + L
Sbjct: 270 VMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLS 329
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+G+++H Y +K G +GN+L+SMY K G DA+ + E + VSF+A+++G V
Sbjct: 330 RGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCV 389
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+N +F++M G+ PD + G L CS L+ G H + ++
Sbjct: 390 QNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTL 449
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+ N ++ +YSK I A + F ++ D++SWN I + L +F ++
Sbjct: 450 ICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLA-L 508
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIR-----MRLNQDVGVGNALVNMYAKCG 352
G++PDD TF +L++C+ V G+ + R R+ + +V++ + G
Sbjct: 509 GLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCI----CMVDILGRAG 564
Query: 353 LISCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSALKLFEQMKATGIKPDSVTFI 408
LI ++ M +V W+ +++A H N LG K K + P+S
Sbjct: 565 LIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSK-----KIQSLGPESTGNF 619
Query: 409 GLLTACNHAGLVKEGEAYFNSMEKTYGI 436
LL+ A + A+ +K +G+
Sbjct: 620 VLLSNIYSAAGRWDDAAHIRITQKDWGL 647
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 90/180 (50%), Gaps = 2/180 (1%)
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
+ +L AC S+ K+IH H ++ N D V + L +Y C + + +LF+E+
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+ +V+ WN II A+A + A+ L+ M G++P+ T+ +L AC+ +++G
Sbjct: 70 PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG- 128
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRL 484
+S K +G+ D+ T L+D + G L+EA+ +D + +++ C L
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMS-HRDVVAWNAMIAGCSL 187
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 200/569 (35%), Positives = 324/569 (56%), Gaps = 11/569 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S+ L C +T L+ G +HA + G+ V+++N ++++Y KCG++ AR VF+
Sbjct: 122 TFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESA 181
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAG--IQSLVK 118
E + VSW+++I+G+ + G + L +M L N Y SA+ AC S+
Sbjct: 182 DELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIEC 241
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ +H ++K G VG +L+ Y K+G DA ++ +PN+V +NA+IAGF++
Sbjct: 242 GKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQ 301
Query: 179 NQQPEKGFE-----VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE 233
+ F +F M +G+ P F+F+ L+ CS G +H K L+
Sbjct: 302 METMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQ 361
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
S+ F+GN ++ LYS I + K F + D++SW + I +E GL++F E+
Sbjct: 362 SDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHEL 421
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
G +PD+FT + +L+ACA LA+V+ G+QIHA+ I+ + + N+ + MYAKCG
Sbjct: 422 LFS-GRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGD 480
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
I + F E + ++VSW+ +I+++A H A+ LFE MK +GI P+ +TF+G+L A
Sbjct: 481 IDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVA 540
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C+H GLV+EG YF M+K +GI+P+++H C++DLLGRAG+L EAE + DP+
Sbjct: 541 CSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPV 600
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
+ +LLSACR+ + G+R+A+++ L+P + YVLL N+Y G+ R ++K
Sbjct: 601 MWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMK 660
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
D G+KKEP S IEV F + SH
Sbjct: 661 DRGVKKEPGLSWIEVGNVVHSFVAGDRSH 689
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 239/451 (52%), Gaps = 16/451 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + L+ ++T +L G H ++K +P + + N++L +Y KCG+ +A+K+FD M
Sbjct: 21 TYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLFDRM 80
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+RN+VSW+++ISG+ Q G + + F + L +++ F++A+S C L G+
Sbjct: 81 PKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGR 140
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IHA G + NSLI MY K G A LV+ A E + VS+N+LIAG+V
Sbjct: 141 LIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIG 200
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC--SVSNDLRKGMILHCLTVKCKLESNPFV 238
++ + MLR GL + ++ L+ C + S+ + G +LH VK L+ + V
Sbjct: 201 SNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVV 260
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA---CSHCAD--YEKGLSVFKEM 293
G ++ Y+K + +A K F+L+ + +++ +N IA AD + + +F EM
Sbjct: 261 GTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEM 320
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
+ G++P +FTF+SIL AC+ + + + GKQIHA + + L D +GNALV +Y+ G
Sbjct: 321 QS-RGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGS 379
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
I K F+ +VVSW ++I H + L LF ++ +G KPD T +L+A
Sbjct: 380 IEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSA 439
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFT 444
C + VK GE Y I I +FT
Sbjct: 440 CANLAAVKSGEQI-----HAYAIKTGIGNFT 465
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 138/284 (48%), Gaps = 11/284 (3%)
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
GL D ++ ++ + + L G + H +K + F+ N ++ +Y K A
Sbjct: 14 GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE--MSNDHGVRPDDFTFASILAAC 313
+K F + +++++SWN+ I+ + Y + +++FKE MS+ +R D FTF++ L+ C
Sbjct: 74 KKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSD---LRLDKFTFSNALSVC 130
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
++ G+ IHA + L V + N+L++MY KCG I + +F + VSWN
Sbjct: 131 GRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWN 190
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC--NHAGLVKEGEAYFNSME 431
++IA + L+L +M G+ +S L AC N + ++ G+
Sbjct: 191 SLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAV 250
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
K G+ D+ T L+D + G L E+ TK F L DP V+
Sbjct: 251 K-LGLDLDVVVGTALLDTYAKIGDL---EDATKIFKLMPDPNVV 290
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 196/578 (33%), Positives = 329/578 (56%), Gaps = 7/578 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S +L C +++ G +HA ++ G VS +LN+YAK ++ + KVF+ M+E
Sbjct: 175 SGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTE 234
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
N+VSW+AMI+G +L A + F +M + P+ F A ++ + K +++
Sbjct: 235 VNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEV 294
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVS--FNALIAGFVENQ 180
Y+L+ G S + VG +LI M K G +A ++ F + +NA+I+G++ +
Sbjct: 295 SGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSG 354
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF-VG 239
EK E+F M + + D +++ + L G +H +K LE N +
Sbjct: 355 FNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSIS 414
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N + Y+K + + K F +E++DLISW + + A S C++++K + +F M + G+
Sbjct: 415 NAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAE-GI 473
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
P+ FTF+S+L +CA L +++G+Q+H + ++ L+ D + +ALV+MYAKCG + + K
Sbjct: 474 APNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKK 533
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+FN + + + VSW IIA HA H + AL+LF +M G++P++VTF+ +L AC+H GL
Sbjct: 534 VFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGL 593
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V+EG YF M+KTYG+ P++EH+ C++DLL R G L +A E+ + P+ + +V TLL
Sbjct: 594 VEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLL 653
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
ACR+ +V +GE A+++ + ++ YVLLSN Y G + D R ++K+ G+KK
Sbjct: 654 GACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKK 713
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
EP S I V GT KF + H + +I L+ L L
Sbjct: 714 EPGCSWISVNGTLHKFYAGDQQHPEKDKIYAKLEELKL 751
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 136/467 (29%), Positives = 244/467 (52%), Gaps = 10/467 (2%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQP--DVIVSNHVLNLYAKCGKMILARKVF 60
+ + LL C + L+Q ++H +LK +++ NHV + Y+KC + A ++F
Sbjct: 69 QPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLF 128
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLV 117
D+MS+RN SW+ +I+G + G L EFF +M + P+++ ++ + C G+ S+
Sbjct: 129 DQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIE 188
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G +HA + G+ S +FV +L++MY K+ D+ V+ E N+VS+NA+I GF
Sbjct: 189 LGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFT 248
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
N F++F M+ +G+ PD +F G + + D+ K + ++ ++SN
Sbjct: 249 SNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTL 308
Query: 238 VGNTIMALYSKFNLIGEAEKAFR--LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
VG ++ + SK + EA F I + WN I+ EK L +F +M
Sbjct: 309 VGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQ 368
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD-VGVGNALVNMYAKCGLI 354
+ + D +T+ S+ A A L + GK++HA I+ L + V + NA+ N YAKCG +
Sbjct: 369 N-DIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSL 427
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
K+FN M R+++SW +++ A++ A+++F M+A GI P+ TF +L +C
Sbjct: 428 EDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSC 487
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ L++ G+ + K G+ D + L+D+ + G L +A++
Sbjct: 488 ANLCLLEYGQQVHGIICKV-GLDMDKCIESALVDMYAKCGCLGDAKK 533
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 94/178 (52%), Gaps = 7/178 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+L C+ L+ G +H + K+G+ D + + ++++YAKCG + A+KVF+ +
Sbjct: 479 TFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRI 538
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
S + VSW+A+I+GH Q G AL+ F +M L PN F + AC+ + +G
Sbjct: 539 SNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGL 598
Query: 121 QIHAYSLKFGYASISFVGN--SLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIAG 175
Q +K Y + + + ++ + +VG+ +DA+ + EPN + + L+
Sbjct: 599 QYFKL-MKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGA 655
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 199/565 (35%), Positives = 330/565 (58%), Gaps = 16/565 (2%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G+ +HA V+K G + + V N +++LY++ G + AR VFD+M R+ V+W++MI+G+ +
Sbjct: 213 GLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVR 272
Query: 81 AGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
G+ L E F++M L P FAS I +CA ++ L + + +LK G+ + V
Sbjct: 273 NGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIV 332
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFE-PNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
+L+ K DAL ++ E N+VS+ A+I+G ++N ++ +F M R+G
Sbjct: 333 ITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREG 392
Query: 197 LLPDRFSFAGGLEI---CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
+ P+ F+++ L + VS +H +K E + VG ++ Y K
Sbjct: 393 VKPNHFTYSAILTVHYPVFVSE-------MHAEVIKTNYERSSSVGTALLDAYVKLGNTI 445
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
+A K F +IE KDL++W+ +A + + E+ +F ++ + G++P++FTF+S++ AC
Sbjct: 446 DAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKE-GIKPNEFTFSSVINAC 504
Query: 314 AG-LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
A A+ + GKQ HA+ I+MRLN + V +ALV MYAK G I ++++F R++VSW
Sbjct: 505 ASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSW 564
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
N++I+ ++ H AL++F++M+ + D+VTFIG++TAC HAGLV++G+ YFNSM
Sbjct: 565 NSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMIN 624
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGE 492
+ I+P ++H++C+IDL RAG L +A + P V TLL A R+ R+V +GE
Sbjct: 625 DHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGE 684
Query: 493 RLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTF 552
A++L LQP ++ YVLLSN+YA+ G W + RK++ +KKEP YS IEV+
Sbjct: 685 LAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKT 744
Query: 553 EKFTVAEFSHSKIGEINYMLKTLSL 577
F + +H +I L LS+
Sbjct: 745 YSFLAGDLTHPLSNQIYSKLSELSI 769
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/470 (28%), Positives = 241/470 (51%), Gaps = 17/470 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++S + + C+ + + G +H +K G+ V V ++++Y K + R+VFDEM
Sbjct: 95 TLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEM 154
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
ERN+VSW+++++G+ G + E F QM +LPN Y ++ I+A + G
Sbjct: 155 GERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGL 214
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HA +K G+ V NSLIS+Y ++G DA V+ + + V++N++IAG+V N
Sbjct: 215 QVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNG 274
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
Q + FE+F M G+ P +FA ++ C+ +L ++ C +K ++ V
Sbjct: 275 QDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVIT 334
Query: 241 TIMALYSKFNLIGEAEKAFRLIEE-KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+M SK + +A F L+EE K+++SW I+ C ++ +++F +M + GV
Sbjct: 335 ALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRRE-GV 393
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+P+ FT+++IL + ++HA +I+ + VG AL++ Y K G + K
Sbjct: 394 KPNHFTYSAILTVHYPVFV----SEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVK 449
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F + +++++W+ ++A +A A KLF Q+ GIKP+ TF ++ AC
Sbjct: 450 VFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTA 509
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTC----LIDLLGRAGKLLEAEEYTKK 465
E F++ Y I + + C L+ + + G + A E K+
Sbjct: 510 AAEQGKQFHA----YAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKR 555
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 182/364 (50%), Gaps = 7/364 (1%)
Query: 55 LARKVFDEMSER--NLVSWSAMISGHHQAGEHLLALEFF-SQMH--LLPNEYIFASAISA 109
+A +FD++ R L + ++ + + + AL F S +H L P+E + +
Sbjct: 43 IAHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNI 102
Query: 110 CAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSF 169
CAG G+Q+H +KFG VG SL+ MYMK +D V+ E E N+VS+
Sbjct: 103 CAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSW 162
Query: 170 NALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK 229
+L+AG+ N +E+F M +G+LP+R++ + + + G+ +H + VK
Sbjct: 163 TSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVK 222
Query: 230 CKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSV 289
E V N++++LYS+ ++ +A F +E +D ++WN+ IA + +
Sbjct: 223 HGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEI 282
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
F +M GV+P TFAS++ +CA L + K + ++ D V AL+ +
Sbjct: 283 FNKMQLA-GVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALS 341
Query: 350 KCGLISCSYKLFNEMLH-RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
KC + + LF+ M +NVVSW +I+ + A+ LF QM+ G+KP+ T+
Sbjct: 342 KCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYS 401
Query: 409 GLLT 412
+LT
Sbjct: 402 AILT 405
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 110/208 (52%), Gaps = 4/208 (1%)
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
++PD+ T + + CAG + G+Q+H ++ L V VG +LV+MY K ++
Sbjct: 89 LQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGR 148
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
++F+EM RNVVSW +++A ++ + L G +LF QM+ G+ P+ T ++ A + G
Sbjct: 149 RVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEG 208
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
+V G ++M +G I F LI L R G L +A + K + +D + ++
Sbjct: 209 VVGIG-LQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEI-RDWVTWNSM 266
Query: 479 LSA-CRLRRDVVIGERLAK-QLFHLQPT 504
++ R +D+ + E K QL ++PT
Sbjct: 267 IAGYVRNGQDLEVFEIFNKMQLAGVKPT 294
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 6/188 (3%)
Query: 4 SISSLLHHC-SKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+ SS+++ C S T A +QG HA +KM + + VS+ ++ +YAK G + A +VF
Sbjct: 496 TFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKR 555
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
ER+LVSW++MISG+ Q G+ ALE F +M ++ + F I+AC + KG
Sbjct: 556 QKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKG 615
Query: 120 QQIHAYSLKFGYASISFVGNS-LISMYMKVGYSSDALLVYGE-AFEPNLVSFNALIAGFV 177
Q+ + + + + S +I +Y + G A+ + E F P + L+
Sbjct: 616 QKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAAR 675
Query: 178 ENQQPEKG 185
++ E G
Sbjct: 676 VHRNVELG 683
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 207/634 (32%), Positives = 332/634 (52%), Gaps = 74/634 (11%)
Query: 1 MAKSISS----LLHHCSKTKALQQGISLHAAVLK-MGIQPDVIVSNHVLNLYAKCGKMIL 55
M++ +SS LL ++T+ G +LH +L+ + P + NH+L Y K G+
Sbjct: 1 MSRPLSSQYAALLSAAARTEPHVAG-ALHCVILRTLPHPPPTYLLNHLLTAYGKAGRHAR 59
Query: 56 ARKVFD-------------------------------EMSERNLVSWSAMISGHHQAGEH 84
AR+VFD M++R++VS++A+I+G G H
Sbjct: 60 ARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSH 119
Query: 85 LLALEFF-----SQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
A+ + + + P+ ++ + A + + G+Q H L+ G+ + +FVG+
Sbjct: 120 AQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGS 179
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG------------------------ 175
L+ MY K+ DA + E N+V +N +I G
Sbjct: 180 PLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSIT 239
Query: 176 -------FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV 228
F +N + E+F+ M QG+ D+++F L C + L +G +H +
Sbjct: 240 WTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYII 299
Query: 229 KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLS 288
+ + + N FVG+ ++ +YSK I AE FR + K++ISW I E+ +
Sbjct: 300 RTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVR 359
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMY 348
VF EM D G+ PDD+T S++++CA LAS++ G Q H + L + V NALV +Y
Sbjct: 360 VFSEMQRD-GIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLY 418
Query: 349 AKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
KCG I +++LF+EM + VSW +++ +A + LFE+M A G+KPD VTFI
Sbjct: 419 GKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFI 478
Query: 409 GLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
G+L+AC+ AG V++G +YF+SM+K +GI P +H+TC+IDL R+GKL EAEE+ K+ P+
Sbjct: 479 GVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPM 538
Query: 469 GQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGA 528
D I GTLLSACRLR D+ IG+ A+ L + P + YVLL +++A+ G W +VA
Sbjct: 539 HPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQL 598
Query: 529 RKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
R+ ++D +KKEP S I+ + F+ + SH
Sbjct: 599 RRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSH 632
>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Brachypodium distachyon]
Length = 796
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 183/568 (32%), Positives = 324/568 (57%), Gaps = 12/568 (2%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
CS+ L++G +HA + G+ V VSN ++++YA+CG M AR+VFD ER+ VSW
Sbjct: 124 CSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSW 183
Query: 72 SAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKG--QQIHAYS 126
++++SG+ + G H L F+ M N + S I C+G V+G + +H
Sbjct: 184 NSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCV 243
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP---- 182
+K G + F+ ++++ MY K G S+A+ ++ +PN+V FNA+IAG ++
Sbjct: 244 VKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKE 303
Query: 183 --EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ ++ + +G+ P F+F+ + C+++ D+ G +H +K + + F+G+
Sbjct: 304 VVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGS 363
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ LY + + + FR + ++D+++W I+ C +E+ L++F E+ G++
Sbjct: 364 ALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGV-GLK 422
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD FT +S++ ACA LA V+ G+Q+ + ++ +GN+ ++MYA+ G + + +
Sbjct: 423 PDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQR 482
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F EM +VVSW+ II++HA H AL+ F +M + P+ +TF+G+LTAC+H GLV
Sbjct: 483 FQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLV 542
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG Y+ M+ YG+ P ++H TC++DLLGRAG+L +AE + + +P+V +LL
Sbjct: 543 DEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLG 602
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
+CR+ RD+ G+ +A ++ LQP ++ YV L N+Y G + R ++K+ G+KKE
Sbjct: 603 SCRIHRDMERGQLVADRIMELQPASSGCYVNLYNMYLDAGELSLGSKIRDLMKERGVKKE 662
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
P S IE++ F + SH + I
Sbjct: 663 PGLSWIELRSGIHSFVAGDKSHPECNAI 690
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 226/430 (52%), Gaps = 15/430 (3%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAK--CGKMILARKVFDEMSER 66
LHH +L Q ++H + + P + + N +L Y + G AR++ DEM R
Sbjct: 17 LHHLRSCASLPQAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRR 76
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQQI 122
N VS++ +I + +AG+ +LE F H + + + +A+A++AC+ L +G+ +
Sbjct: 77 NAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVV 136
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
HA ++ G A FV NSL+SMY + G +A V+ E + VS+N+L++G++
Sbjct: 137 HALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAH 196
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM--ILHCLTVKCKLESNPFVGN 240
E+ VF LM R + + F+ ++ CS + +G+ +H VK L+++ F+ +
Sbjct: 197 EEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLAS 256
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIA------ACSHCADYEKGLSVFKEMS 294
++ +Y+K + EA F+ + + +++ +N IA A H + LS++ E+
Sbjct: 257 AMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQ 316
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
+ G+ P +FTF+S++ AC ++ GKQIH +++ D +G+AL+++Y +
Sbjct: 317 S-RGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACM 375
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
++ F + ++VV+W +I+ + L AL LF ++ G+KPD T ++ AC
Sbjct: 376 EDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNAC 435
Query: 415 NHAGLVKEGE 424
+V+ GE
Sbjct: 436 ASLAVVRTGE 445
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 193/387 (49%), Gaps = 17/387 (4%)
Query: 107 ISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGY--SSDALLVYGEAFEP 164
+ +CA SL + +H + + + F+ N+L++ Y ++G + A + E
Sbjct: 20 LRSCA---SLPQAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRR 76
Query: 165 NLVSFNALIAGFVENQQPEKGFEVFKLMLRQG-LLPDRFSFAGGLEICSVSNDLRKGMIL 223
N VSFN LI + Q E+ E F R + DRF++A L CS + L++G ++
Sbjct: 77 NAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVV 136
Query: 224 HCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY 283
H L V L FV N+++++Y++ +GEA + F + EE+D +SWN+ ++ +
Sbjct: 137 HALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAH 196
Query: 284 EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG--KQIHAHLIRMRLNQDVGVG 341
E+ L VF M + + F S++ C+G G + +H +++ L+ D+ +
Sbjct: 197 EEMLRVFALMRR-CAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLA 255
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA------AHANHRLGGSALKLFEQM 395
+A+V+MYAK G +S + LF +L NVV +N +IA A + + AL L+ ++
Sbjct: 256 SAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSEL 315
Query: 396 KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGK 455
++ G++P TF ++ ACN AG ++ G+ + K + D + LIDL +
Sbjct: 316 QSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLK-HCFQGDDFIGSALIDLYFNSAC 374
Query: 456 LLEAEEYTKKFPLGQDPIVLGTLLSAC 482
+ + + P QD + ++S C
Sbjct: 375 MEDGFRCFRSVP-KQDVVTWTAMISGC 400
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 141/297 (47%), Gaps = 23/297 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS++ C+ ++ G +H VLK Q D + + +++LY M + F +
Sbjct: 326 TFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSV 385
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
++++V+W+AMISG Q AL F ++ L P+ + +S ++ACA + + G+
Sbjct: 386 PKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGE 445
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+ ++ K G+ + +GNS I MY + G A+ + E ++VS++A+I+ ++
Sbjct: 446 QMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHG 505
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS----VSNDLRKGMILH-----CLTVK-C 230
+ + F M+ ++P+ +F G L CS V LR I+ C TVK C
Sbjct: 506 CARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKHC 565
Query: 231 KLESNPFVGNTIMALYSKFNLIGEAEKAFR-LIEEKDLISWNTFIAACSHCADYEKG 286
++ L + + +AE R I + + W + + +C D E+G
Sbjct: 566 ---------TCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIHRDMERG 613
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 126/253 (49%), Gaps = 9/253 (3%)
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEE---KDLISWNTFIAACSHCADYEKGLSVFKEM 293
F+ NT++A Y + G+ +A RL++E ++ +S+N I A S E+ L F
Sbjct: 46 FLRNTLLAAYCRLG-AGDTHQARRLLDEMPRRNAVSFNLLIDAYSRAGQTEESLETFLHA 104
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
V+ D FT+A+ LAAC+ ++ GK +HA + L + V V N+LV+MYA+CG
Sbjct: 105 HRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGD 164
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ + ++F+ R+ VSWN++++ + L++F M+ + +S ++
Sbjct: 165 MGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKC 224
Query: 414 CNHAGLVKEG--EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQD 471
C+ G EA + K G+ D+ + ++D+ + G L EA K L +
Sbjct: 225 CSGGDGSVRGIAEAVHGCVVKA-GLDTDLFLASAMVDMYAKRGALSEAVALFKSV-LDPN 282
Query: 472 PIVLGTLLSA-CR 483
+V +++ CR
Sbjct: 283 VVVFNAMIAGLCR 295
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 196/578 (33%), Positives = 329/578 (56%), Gaps = 7/578 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S +L C +++ G +HA ++ G VS +LN+YAK ++ + KVF+ M+E
Sbjct: 175 SGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTE 234
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
N+VSW+AMI+G +L A + F +M + P+ F A ++ + K +++
Sbjct: 235 VNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEV 294
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVS--FNALIAGFVENQ 180
Y+L+ G S + VG +LI M K G +A ++ F + +NA+I+G++ +
Sbjct: 295 SGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSG 354
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF-VG 239
EK E+F M + + D +++ + L G +H +K LE N +
Sbjct: 355 FNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSIS 414
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N + Y+K + + K F +E++DLISW + + A S C++++K + +F M + G+
Sbjct: 415 NAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAE-GI 473
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
P+ FTF+S+L +CA L +++G+Q+H + ++ L+ D + +ALV+MYAKCG + + K
Sbjct: 474 APNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKK 533
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+FN + + + VSW IIA HA H + AL+LF +M G++P++VTF+ +L AC+H GL
Sbjct: 534 VFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGL 593
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V+EG YF M+KTYG+ P++EH+ C++DLL R G L +A E+ + P+ + +V TLL
Sbjct: 594 VEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLL 653
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
ACR+ +V +GE A+++ + ++ YVLLSN Y G + D R ++K+ G+KK
Sbjct: 654 GACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKK 713
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
EP S I V GT KF + H + +I L+ L L
Sbjct: 714 EPGCSWISVNGTLHKFYAGDQQHPEKDKIYAKLEELKL 751
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 136/467 (29%), Positives = 244/467 (52%), Gaps = 10/467 (2%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQP--DVIVSNHVLNLYAKCGKMILARKVF 60
+ + LL C + L+Q ++H +LK +++ NHV + Y+KC + A ++F
Sbjct: 69 QPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLF 128
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLV 117
D+MS+RN SW+ +I+G + G L EFF +M + P+++ ++ + C G+ S+
Sbjct: 129 DQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIE 188
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G +HA + G+ S +FV +L++MY K+ D+ V+ E N+VS+NA+I GF
Sbjct: 189 LGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFT 248
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
N F++F M+ +G+ PD +F G + + D+ K + ++ ++SN
Sbjct: 249 SNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTL 308
Query: 238 VGNTIMALYSKFNLIGEAEKAFR--LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
VG ++ + SK + EA F I + WN I+ EK L +F +M
Sbjct: 309 VGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQ 368
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD-VGVGNALVNMYAKCGLI 354
+ + D +T+ S+ A A L + GK++HA I+ L + V + NA+ N YAKCG +
Sbjct: 369 N-DIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSL 427
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
K+FN M R+++SW +++ A++ A+++F M+A GI P+ TF +L +C
Sbjct: 428 EDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSC 487
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ L++ G+ + K G+ D + L+D+ + G L +A++
Sbjct: 488 ANLCLLEYGQQVHGIICKV-GLDMDKCIESALVDMYAKCGCLGDAKK 533
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 94/178 (52%), Gaps = 7/178 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+L C+ L+ G +H + K+G+ D + + ++++YAKCG + A+KVF+ +
Sbjct: 479 TFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRI 538
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
S + VSW+A+I+GH Q G AL+ F +M L PN F + AC+ + +G
Sbjct: 539 SNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGL 598
Query: 121 QIHAYSLKFGYASISFVGN--SLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIAG 175
Q +K Y + + + ++ + +VG+ +DA+ + EPN + + L+
Sbjct: 599 QYFKL-MKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGA 655
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 202/575 (35%), Positives = 332/575 (57%), Gaps = 4/575 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+S++L+ C+ + G+ +H ++K+G D +N +L++YAK G A VF E+
Sbjct: 190 SLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEI 249
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ ++VSW+A+I+G ++ LAL+ +M + P+ + +SA+ ACA I + G+
Sbjct: 250 PKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGR 309
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H+ +K SFVG LI MY K G DA +V+ +++ +N++I+G+
Sbjct: 310 QLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCG 369
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ +F M ++GL ++ + + L+ + S +H +++K + + +V N
Sbjct: 370 YDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVAN 429
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ Y K L+ +A K F + +DL+++ + I A S E+ L ++ M D ++
Sbjct: 430 SLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRM-QDRDIK 488
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD F F+S+ ACA L++ + GKQIH H+++ L DV GN+LVNMYAKCG I + +
Sbjct: 489 PDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCI 548
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FNE+ R +VSW+ +I A H G AL+LF QM GI P+ +T + +L+ACNHAGLV
Sbjct: 549 FNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLV 608
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
E +F MEK +GI+P EH+ C++D+LGR G+L EA K+ P V G LL
Sbjct: 609 TEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLG 668
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
A R+ +++ +G A+ L L+P + ++LL+N+YAS GMW +VA R+ +K+S +KKE
Sbjct: 669 AARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKE 728
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P S IE++ F V + SH + EI L L
Sbjct: 729 PGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDL 763
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 141/495 (28%), Positives = 256/495 (51%), Gaps = 48/495 (9%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL + +K + G+++HA ++++G+ + N ++NLY+KC +ARK+ + SE +
Sbjct: 56 LLLQFTASKDVSSGMAIHARIIRLGLL---GLRNRLVNLYSKCQCFRVARKLVIDSSEPD 112
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLL------------------------------ 97
LVSWSA+ISG+ Q G AL + +M+LL
Sbjct: 113 LVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHR 172
Query: 98 -------------PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISM 144
PNE+ ++ ++ACAG++ G ++H Y +K GY S F N+L+ M
Sbjct: 173 VALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDM 232
Query: 145 YMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSF 204
Y K G A+ V+ E +P++VS+NA+IAG V +++ + ++ M + P F+
Sbjct: 233 YAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTL 292
Query: 205 AGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE 264
+ L+ C+ ++ G LH +K +E + FVG ++ +YSK L+ +A F L+
Sbjct: 293 SSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPX 352
Query: 265 KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ 324
KD+I WN+ I+ S+C + +S+F M + G+ + T ++IL + AG + +Q
Sbjct: 353 KDVIVWNSIISGYSNCGYDIEAMSLFTNMYKE-GLEFNQTTLSTILKSTAGSQANGFCEQ 411
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
+H I+ D V N+L++ Y KC L+ + K+F ++V++ ++I A++ + L
Sbjct: 412 VHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGL 471
Query: 385 GGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFT 444
G ALK++ +M+ IKPD+ F L AC + ++G+ + K G+ D+
Sbjct: 472 GEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKC-GLLSDVFAGN 530
Query: 445 CLIDLLGRAGKLLEA 459
L+++ + G + +A
Sbjct: 531 SLVNMYAKCGSIDDA 545
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 13/153 (8%)
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
V G IHA +IR+ L N LVN+Y+KC + KL + ++VSW+ +I+
Sbjct: 65 DVSSGMAIHARIIRLGLLGLR---NRLVNLYSKCQCFRVARKLVIDSSEPDLVSWSALIS 121
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE-----AYFNSMEK 432
+ + G AL + +M G K + TF +L C+ ++ G+ A M
Sbjct: 122 GYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHRVALVTEMIS 181
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKK 465
T GISP+ F+ L AG LE E Y K
Sbjct: 182 T-GISPN--EFSLSTVLNACAG--LEDENYGMK 209
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 202/574 (35%), Positives = 328/574 (57%), Gaps = 5/574 (0%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C + + G +H ++K G+ D++V + ++ +YAKC + A K+FDEM ++
Sbjct: 111 SVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDK 170
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIH 123
++ W+ +IS ++Q+G+ AL +F M P+ +AIS+CA + L +G++IH
Sbjct: 171 DVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIH 230
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ G+ SFV +L+ MY K G A+ V+ + +V++N++I G+
Sbjct: 231 KELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGI 290
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
++FK M +G+ P + L CS S L +G +H ++ +++ + F+ +++M
Sbjct: 291 SCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLM 350
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
LY K + AE F+L+ + +SWN I+ L +F EMS V PD
Sbjct: 351 DLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSF-VEPDA 409
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
TF S+LAAC+ LA+++ G++IH ++ L + V AL++MYAKCG + ++ +F
Sbjct: 410 ITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKC 469
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
+ R++VSW ++I A+ +H AL+LF +M + +KPD VTF+ +L+AC+HAGLV +G
Sbjct: 470 LPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDG 529
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP-LGQDPIVLGTLLSAC 482
+FN M YGI P IEH++CLI LLGRAG+L EA E + P + D +L TL SAC
Sbjct: 530 LYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSAC 589
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
RL +++ +G +A+ L P +S Y++LSN+YAS G W +V R +KD GLKK P
Sbjct: 590 RLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPG 649
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
S IE+ F V + SH + I +L L+
Sbjct: 650 CSWIEINEKIVPFFVEDNSHYHLEGIGNILSYLT 683
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 132/486 (27%), Positives = 246/486 (50%), Gaps = 10/486 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A+ + LL +K+L+QG LH V+ +G+Q DV V ++++LY C A+ VFD
Sbjct: 3 ARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFD 62
Query: 62 EMSERNLVSW-SAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSL 116
+ +S + +++G+ + + AL F ++ L P+ Y + S + AC G++ +
Sbjct: 63 VIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRV 122
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
V GQ IH +K G VG+SL+ MY K A+ ++ E + ++ +N +I+ +
Sbjct: 123 VLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCY 182
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
++ + E+ F +M R G PD + + C+ DL +G +H V +
Sbjct: 183 YQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDS 242
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
FV ++ +Y K + A + F + K +++WN+ I D + +FK M ++
Sbjct: 243 FVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSE 302
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
GV+P T S L AC+ A + GK +H ++IR R+ D+ + ++L+++Y KCG +
Sbjct: 303 -GVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVES 361
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ +F M VSWN +I+ + AL+LF +M + ++PD++TF +L AC+
Sbjct: 362 AETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQ 421
Query: 417 AGLVKEGEAYFNSM-EKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
+++G N + E+ G + + L+D+ + G + EA K P +D +
Sbjct: 422 LAALEKGREIHNLIVERNLGNNEVV--MGALLDMYAKCGAVEEAFGVFKCLP-ERDLVSW 478
Query: 476 GTLLSA 481
++++A
Sbjct: 479 TSMITA 484
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +S+L CS+ AL++G +H +++ + + +V +L++YAKCG + A VF
Sbjct: 409 AITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFK 468
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
+ ER+LVSW++MI+ + G ALE F++M ++ P+ F + +SAC+
Sbjct: 469 CLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACS 521
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 197/574 (34%), Positives = 335/574 (58%), Gaps = 5/574 (0%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+LL C+ + Q + ++K+G +IV N +++ Y K ++ LA ++F EM E
Sbjct: 154 TLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEI 213
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
+ VS++AMI+G+ + G A+ F +M L P E+ FA+ + A G+ +V GQQIH
Sbjct: 214 DSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIH 273
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
++ +K + FV N+L+ Y K DA ++ E E + VS+N +I+G+ + + +
Sbjct: 274 SFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHK 333
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
F++F+ + +F FA L I S + D G +H T+ +S VGN+++
Sbjct: 334 YAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLV 393
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K EAE F + + + W I+A YE+GL +F +M V D
Sbjct: 394 DMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQ-ASVIADQ 452
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
TFAS+L A A +AS+ GKQ+H+ +I+ +V G+AL+++YAKCG I + + F E
Sbjct: 453 ATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQE 512
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M RN+VSWN +I+A+A + + LK F++M +G++PDSV+F+G+L+AC+H+GLV+EG
Sbjct: 513 MPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEG 572
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
+FNSM + Y + P EH+ ++D+L R+G+ EAE+ + P+ D I+ ++L+ACR
Sbjct: 573 LWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACR 632
Query: 484 LRRDVVIGERLAKQLFHLQP-TTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
+ ++ + R A QLF+++ +PYV +SN+YA+ G W +V+ K ++D G+KK P+
Sbjct: 633 IHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPA 692
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
YS +E++ F+ + H +I EI + L+
Sbjct: 693 YSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLT 726
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/435 (28%), Positives = 216/435 (49%), Gaps = 5/435 (1%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH 95
+ + +N +++ Y K G + ARK+FD M ER V+W+ +I G+ Q + A E F QM
Sbjct: 82 NTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQ 141
Query: 96 LL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSS 152
P+ F + +S C G + + Q+ +K GY S VGN+L+ Y K
Sbjct: 142 RCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLD 201
Query: 153 DALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
A ++ E E + VS+NA+I G+ ++ EK +F M GL P F+FA L
Sbjct: 202 LACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANI 261
Query: 213 VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNT 272
+D+ G +H +K N FV N ++ YSK + + +A K F + E+D +S+N
Sbjct: 262 GLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNV 321
Query: 273 FIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
I+ + ++ +F+E+ R F FA++L+ + + G+QIHA I
Sbjct: 322 IISGYAWDGKHKYAFDLFRELQFTAFDRK-QFPFATMLSIASNTLDWEMGRQIHAQTIVT 380
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
+ ++ VGN+LV+MYAKCG + +F + HR+ V W +I+A+ L+LF
Sbjct: 381 TADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLF 440
Query: 393 EQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
+M+ + D TF LL A + G+ + + K+ G ++ + L+D+ +
Sbjct: 441 NKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKS-GFMSNVFSGSALLDVYAK 499
Query: 453 AGKLLEAEEYTKKFP 467
G + +A + ++ P
Sbjct: 500 CGSIKDAVQTFQEMP 514
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 190/421 (45%), Gaps = 59/421 (14%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+++L S T + G +HA + +++V N ++++YAKCGK A +F ++
Sbjct: 355 ATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTH 414
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
R+ V W+AMIS + Q G + L+ F++M ++ ++ FAS + A A I SL G+Q+
Sbjct: 415 RSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQL 474
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H++ +K G+ S F G++L+ +Y K G DA+ + E + N+VS+NA+I+ + +N +
Sbjct: 475 HSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEA 534
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI-LHCLTVKCKLESNPFVGNT 241
E + FK M+ GL PD SF G L CS S + +G+ + +T KL+ +
Sbjct: 535 EATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYAS 594
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ + + EAEK + EM D P
Sbjct: 595 VVDMLCRSGRFNEAEK-------------------------------LMAEMPID----P 619
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D+ ++S+L AC + + ++ L M +D + N+YA G K+
Sbjct: 620 DEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVH 679
Query: 362 NEMLHRNV-----VSWNTIIAAHANHRLGGSAL-------------KLFEQMKATGIKPD 403
M R V SW I H H + L + M+ G KPD
Sbjct: 680 KAMRDRGVKKLPAYSWVEI--KHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPD 737
Query: 404 S 404
+
Sbjct: 738 T 738
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +SLL + +L G LH+ ++K G +V + +L++YAKCG + A + F EM
Sbjct: 454 TFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEM 513
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
+RN+VSW+AMIS + Q GE L+ F +M L P+ F +SAC+
Sbjct: 514 PDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACS 564
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 97/221 (43%), Gaps = 19/221 (8%)
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
I A +++ + D N V + K G +S + +LF +M H+N VS N +I+ +
Sbjct: 39 IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 98
Query: 385 GGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFT 444
G A KLF+ M ++ +VT+ L+ + KE F M++ G PD F
Sbjct: 99 LGEARKLFDGM----VERTAVTWTILIGGYSQLNQFKEAFELFVQMQRC-GTEPDYVTFV 153
Query: 445 CLIDLLGRAGKLLE---AEEYTKKFPLGQDP--IVLGTLL-SACRLRRDVVIGERLAKQL 498
L L G G + + T+ LG D IV TL+ S C+ R LA QL
Sbjct: 154 TL--LSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNR-----LDLACQL 206
Query: 499 FHLQPTTTS-PYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
F P S Y + Y+ DG+ +++SGLK
Sbjct: 207 FKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLK 247
>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Brachypodium distachyon]
Length = 682
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 196/558 (35%), Positives = 324/558 (58%), Gaps = 2/558 (0%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L G ++HA +++ DVI NH++ Y KCG++ LAR++FD M RN VS + ++SG
Sbjct: 27 LCTGKAIHAQMIRAA-HFDVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSG 85
Query: 78 HHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
+ AG H AL NEY+ ++A+SA A ++S G+Q H Y++K G +V
Sbjct: 86 YASAGRHSDALALLKAADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPYV 145
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
N+++ MY + + DA+ V+ ++ +FN++I GF++ + + + + M+ +
Sbjct: 146 CNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVE 205
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
D S+ L C+ + +L G +H +K +LE N +VG+ ++ +Y K + +A
Sbjct: 206 QWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHS 265
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
AF ++ EK+++SW + A + +E L +F ++ + GVRP++FT+A L +CAGLA
Sbjct: 266 AFEVLPEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIE-GVRPNEFTYAVALNSCAGLA 324
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
++++G + A ++ + V NAL+NMY+K G I ++++F M R+VVSWN++I
Sbjct: 325 ALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVII 384
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
+A+H L A+ +F M I P VTF+G+L AC GLV EG Y N M K GI
Sbjct: 385 GYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIK 444
Query: 438 PDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQ 497
P EH+TC++ LL RAG+L EAE++ +G D + +LLS+C++ ++ +G R+A+Q
Sbjct: 445 PGREHYTCMVGLLCRAGRLDEAEQFILSNCIGTDVVAWKSLLSSCQVYKNYGLGHRVAEQ 504
Query: 498 LFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTV 557
+ L+P YVLLSN+YA W V RK++++ G++KEP S I+V FT
Sbjct: 505 ILQLKPNDVGTYVLLSNMYAKANRWDGVVKVRKLMRERGVRKEPGVSWIQVGSEVHVFTS 564
Query: 558 AEFSHSKIGEINYMLKTL 575
+ +H I +I LK L
Sbjct: 565 EDKNHKWINQITIKLKEL 582
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 200/413 (48%), Gaps = 8/413 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+S+ L + ++ G H +K G+Q V N VL++Y +C + A KVF+ +S
Sbjct: 111 LSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPYVCNAVLHMYCQCAHVEDAVKVFENVS 170
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISA---CAGIQSLVKGQQ 121
++ ++++MI+G GE ++ M ++ S ++ CA + L+ G Q
Sbjct: 171 GFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVEQWDHVSYVAVLGHCASTKELLLGCQ 230
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+HA +LK +VG++L+ MY K + DA + E N+VS+ A++ + +N++
Sbjct: 231 VHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNVVSWTAVMTAYTQNER 290
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
E ++F + +G+ P+ F++A L C+ L+ G L +K V N
Sbjct: 291 FEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMKTGHWGALSVCNA 350
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+M +YSK I +A + F + +D++SWN+ I +H + + VF +M + P
Sbjct: 351 LMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAHHGLAREAMCVFHDMLLAE-IVP 409
Query: 302 DDFTFASILAACAGLASVQHG-KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK- 359
TF +L ACA L V G ++ + M + +V + + G + + +
Sbjct: 410 SYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREHYTCMVGLLCRAGRLDEAEQF 469
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
+ + + +VV+W +++++ ++ G ++ EQ+ +KP+ V LL+
Sbjct: 470 ILSNCIGTDVVAWKSLLSSCQVYKNYGLGHRVAEQI--LQLKPNDVGTYVLLS 520
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 160/306 (52%), Gaps = 10/306 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S ++L HC+ TK L G +HA LK ++ +V V + ++++Y KC A F+ +
Sbjct: 211 SYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVL 270
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
E+N+VSW+A+++ + Q AL+ F + + PNE+ +A A+++CAG+ +L G
Sbjct: 271 PEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGN 330
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+ A ++K G+ V N+L++MY K G DA V+ ++VS+N++I G+ +
Sbjct: 331 ALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAHHG 390
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVG 239
+ VF ML ++P +F G L C+ + +G+ L+ + + ++
Sbjct: 391 LAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREHY 450
Query: 240 NTIMALYSKFNLIGEAEKAFRLIE--EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
++ L + + EAE+ F L D+++W + +++C +Y G V +++
Sbjct: 451 TCMVGLLCRAGRLDEAEQ-FILSNCIGTDVVAWKSLLSSCQVYKNYGLGHRVAEQILQ-- 507
Query: 298 GVRPDD 303
++P+D
Sbjct: 508 -LKPND 512
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 215/607 (35%), Positives = 330/607 (54%), Gaps = 41/607 (6%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARK--------- 58
LL C + L G SLH+ +K I P SNH + LY+KCG++ ARK
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 59 ----------------------VFDEMSERNLVSWSAMISGHHQAGEHLLALEFFS---Q 93
+FD++ E +LVS++ +IS + GE AL FS +
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133
Query: 94 MHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSD 153
M L + + ++ I+AC L+ Q+H+ ++ G+ S V N+L++ Y K G D
Sbjct: 134 MGLDMDXFTLSAVITACCDDVGLIG--QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDD 191
Query: 154 ALLV-YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
A V YG + VS+N++I + ++Q+ K +F+ M+R+GL D F+ A L +
Sbjct: 192 AKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFT 251
Query: 213 VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL-IGEAEKAFRLIEEKDLISWN 271
DL G+ H +K N VG+ ++ LYSK + + K F I E DL+ WN
Sbjct: 252 CLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWN 311
Query: 272 TFIAACSHCADY-EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
T ++ S ++ E L F++M G RP+D +F +++AC+ L+S GKQIH+ +
Sbjct: 312 TMVSGYSQNEEFLEDALECFRQMQGI-GYRPNDCSFVCVISACSNLSSPSQGKQIHSLAL 370
Query: 331 RMRLNQD-VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
+ + + + V NAL+ MY+KCG + + +LF+ M N VS N++IA +A H + +L
Sbjct: 371 KSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESL 430
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
LF+ M I P S+TFI +L+AC H G V+EG YFN M++ + I P+ EH++C+IDL
Sbjct: 431 HLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDL 490
Query: 450 LGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPY 509
LGRAGKL EAE + P I +LL ACR ++ + + A Q+ L+P+ +PY
Sbjct: 491 LGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPY 550
Query: 510 VLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEIN 569
V+LSN+YAS G W +VA RK ++D G+KK+P S IEV+ F + SH I EI
Sbjct: 551 VVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIY 610
Query: 570 YMLKTLS 576
L+ +S
Sbjct: 611 EFLEEMS 617
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 181/395 (45%), Gaps = 41/395 (10%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
F + C + L G+ +H+ +K ++ N I +Y K G + A + +
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 163 EPNLVSFNALIAGFVENQQP-------------------------------EKGFEVFKL 191
+PN+ SFNA+IA + + +P +F
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMI--LHCLTVKCKLESNPFVGNTIMALYSKF 249
M GL D F+ + + C +D+ G+I LH + V +S V N ++ Y K
Sbjct: 131 MREMGLDMDXFTLSAVITAC--CDDV--GLIGQLHSVAVSSGFDSYVSVNNALLTYYGKN 186
Query: 250 NLIGEAEKAFRLIEE-KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
+ +A++ F + +D +SWN+ I A + K L +F+EM G+ D FT AS
Sbjct: 187 GDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVR-RGLNVDMFTLAS 245
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC-GLISCSYKLFNEMLHR 367
+L A L + G Q H LI+ +Q+ VG+ L+++Y+KC G +S K+F E+
Sbjct: 246 VLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEP 305
Query: 368 NVVSWNTIIAAHA-NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
++V WNT+++ ++ N AL+ F QM+ G +P+ +F+ +++AC++ +G+
Sbjct: 306 DLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQI 365
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ K+ S I LI + + G L +A
Sbjct: 366 HSLALKSDIPSNRISVDNALIAMYSKCGNLQDARR 400
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 147/282 (52%), Gaps = 8/282 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKC-GKMILARKVFDE 62
+++S+L + + L G+ H ++K G + V + +++LY+KC G M RKVF+E
Sbjct: 242 TLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEE 301
Query: 63 MSERNLVSWSAMISGHHQAGEHLL-ALEFFSQMHLL---PNEYIFASAISACAGIQSLVK 118
++E +LV W+ M+SG+ Q E L ALE F QM + PN+ F ISAC+ + S +
Sbjct: 302 ITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQ 361
Query: 119 GQQIHAYSLKFGYASISF-VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+QIH+ +LK S V N+LI+MY K G DA ++ E N VS N++IAG+
Sbjct: 362 GKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYA 421
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNP 236
++ + +F+ ML + + P +F L C+ + + +G + + K +E
Sbjct: 422 QHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEA 481
Query: 237 FVGNTIMALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAAC 277
+ ++ L + + EAE R+ I W + + AC
Sbjct: 482 EHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGAC 523
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 367 bits (942), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 195/575 (33%), Positives = 319/575 (55%), Gaps = 4/575 (0%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
++S + CS L+ G H ++ ++ D V N +++LY KC ++ LARK+FD M
Sbjct: 218 LASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCME 277
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFF---SQMHLLPNEYIFASAISACAGIQSLVKGQQ 121
RNLVSW+ MI+G+ Q A+ F SQ P+ + AS +++C + ++ +G+Q
Sbjct: 278 NRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQ 337
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+HA+++K S +V NSLI MY K + ++A V+ E + +S+NA+I G+
Sbjct: 338 VHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGD 397
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+VF M L P +F L + S + + +H L VK + + G++
Sbjct: 398 LAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSS 457
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +YSKF+L+ +A+ F L+ +D++ WN I + E+ + +F ++ G+ P
Sbjct: 458 LIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVS-GLAP 516
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
++FTF +++ + L S+ HG+Q HA +I+ + D V NAL++MYAKCG I LF
Sbjct: 517 NEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLF 576
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
L ++V+ WN++I+ +A H AL +F M TG++P+ VTF+G+L+AC HAGLV
Sbjct: 577 ESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHAGLVD 636
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
EG +F+ M+ Y I P EH+ +++L GR+GKL A+E+ ++ P+ V +LLSA
Sbjct: 637 EGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWRSLLSA 696
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
C L +V IG + P + P VL+SN+YAS G+W D R+ + +G+ KEP
Sbjct: 697 CHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASRGLWSDAQKLRQGMDCAGVVKEP 756
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
YS IEV F H + I +L L+
Sbjct: 757 GYSWIEVMKEVHTFIARGREHPEADVIYSLLDELT 791
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 160/525 (30%), Positives = 265/525 (50%), Gaps = 42/525 (8%)
Query: 5 ISSLLHHCSKTKALQQGISL-HAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ LL C L + + L HA + G PD+ ++N +L Y+K G++ AR++FD M
Sbjct: 13 LAQLLLSCLAGDRLHRLLPLAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRM 72
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL-----PNEYIFASAISACAGIQSLVK 118
+NLVSW + IS H Q G A+ F+ PNE++ ASA+ ACA +++
Sbjct: 73 PHKNLVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSF 132
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
GQQ+H +++ G +VG +LI++Y KVG A+LV+ N V++ A+I G+ +
Sbjct: 133 GQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQ 192
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
Q E+F M G+ PDRF A + CS L G H + +E++ V
Sbjct: 193 IGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASV 252
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N ++ LY K + + A K F +E ++L+SW T IA + + +++F ++S + G
Sbjct: 253 INALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQE-G 311
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+PD F ASIL +C LA++ G+Q+HAH I+ L D V N+L++MYAKC ++ +
Sbjct: 312 WQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEAR 371
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLG--GSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+F + + +S+N +I ++ RLG A+ +F +M+ +KP +TF+ LL +
Sbjct: 372 AVFEALAEDDAISYNAMIEGYS--RLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSS 429
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
++ + + K+ G S D+ + LID+ KF L +D +
Sbjct: 430 QSAIELSKQIHGLIVKS-GTSLDLYAGSSLIDVY-------------SKFSLVEDAKAVF 475
Query: 477 TLLSACRLRRDVVI-------------GERLAKQLFHLQPTTTSP 508
L+ RD+VI GE K LQ + +P
Sbjct: 476 NLMH----NRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAP 516
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 367 bits (942), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 204/577 (35%), Positives = 317/577 (54%), Gaps = 6/577 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S++ C + G LHA V+K + N ++++Y G++ A VF +
Sbjct: 262 TFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRI 321
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFS----QMHLLPNEYIFASAISACAGIQSLVKG 119
++L+SW MI+G+ Q G + AL F Q PNE+IF S SAC+ + L G
Sbjct: 322 PTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYG 381
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+H +KFG F G SL MY K G+ A + + + P++VS+NA+IA F +N
Sbjct: 382 KQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADN 441
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ + F+ M+ GL PD ++ L C L +G +H VK + V
Sbjct: 442 GDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVC 501
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEK-DLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N+++ +Y+K + + +A FR I +L+SWN ++AC + ++KEM + G
Sbjct: 502 NSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEM-HFSG 560
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+PD T ++L CA L S+ G Q+H + I+ L DV V N L++MYAKCG + +
Sbjct: 561 NKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHAR 620
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+F+ + ++VSW+++I +A LG AL LF M G++P+ VT++G L+AC+H G
Sbjct: 621 DVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIG 680
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV+EG + SME +GI P EHF+C++DLL RAG L EAE + +K L D TL
Sbjct: 681 LVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTL 740
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L+AC+ +V I ER A + L P+ ++ V+L N++AS G W +VA RK++K G++
Sbjct: 741 LAACKTHNNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQ 800
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
K P S IEV+ F F + SH + I ML+ L
Sbjct: 801 KVPGQSWIEVKDKFHIFFSEDSSHPQRNLIYTMLEEL 837
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/463 (31%), Positives = 246/463 (53%), Gaps = 7/463 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +SL+ C+ ++L +H VLK QP +I+ NH++N+Y KCG M ARKVFD M
Sbjct: 161 TYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTM 220
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
N+VSW++MISG+ Q G+ A+ + QM P++ F S I AC + G+
Sbjct: 221 QLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGR 280
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HA+ +K + N+LISMY G A V+ +L+S+ +I G+++
Sbjct: 281 QLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLG 340
Query: 181 QPEKGFEVFKLMLRQGLL-PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ +F+ +LRQG P+ F F CS +L G +H + VK L N F G
Sbjct: 341 YRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAG 400
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ +Y+KF + A+ AF I+ D++SWN IAA + D + + F++M + G+
Sbjct: 401 CSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHI-GL 459
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
PD T+ S+L C + G+QIH++++++ ++++ V N+L+ MY KC + +
Sbjct: 460 TPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALN 519
Query: 360 LFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+F ++ + N+VSWN I++A + G +L+++M +G KPDS+T LL C
Sbjct: 520 VFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELT 579
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ G K+ G+ D+ LID+ + G L A +
Sbjct: 580 SLGVGNQVHCYSIKS-GLILDVSVCNGLIDMYAKCGSLKHARD 621
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 217/448 (48%), Gaps = 7/448 (1%)
Query: 55 LARKVFDEMS-ERNLVSWSAMISGHHQAGEHLLALEFF---SQMHLLPNEYIFASAISAC 110
L +F +S E S+ + H E L A +F S H P+ Y S + AC
Sbjct: 112 LQPAIFSNLSKELPTNSYIIFLCKQHHYKEALEAFDFHLKNSNSHFEPSTY--TSLVLAC 169
Query: 111 AGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFN 170
A +SL ++IH + LK Y + N +I+MY K G DA V+ PN+VS+
Sbjct: 170 ANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWT 229
Query: 171 ALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC 230
++I+G+ +N Q ++ M R G PD+ +F ++ C ++ D+ G LH +K
Sbjct: 230 SMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKS 289
Query: 231 KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVF 290
+ N ++++Y+ F I A F I KDLISW T I + L +F
Sbjct: 290 WFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLF 349
Query: 291 KEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
+++ +P++F F S+ +AC+ L +++GKQ+H ++ L ++V G +L +MYAK
Sbjct: 350 RDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAK 409
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGL 410
G + + F ++ + ++VSWN IIAA A++ A+ F QM G+ PDS+T+I L
Sbjct: 410 FGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISL 469
Query: 411 LTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQ 470
L C + +G + + K G +I L+ + + L +A +
Sbjct: 470 LCTCGSPVRLNQGRQIHSYIVKI-GFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNA 528
Query: 471 DPIVLGTLLSACRLRRDVVIGERLAKQL 498
+ + +LSAC ++ RL K++
Sbjct: 529 NLVSWNAILSACLQKKQEGETFRLYKEM 556
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 199/559 (35%), Positives = 322/559 (57%), Gaps = 4/559 (0%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+HA K+G + V + +++ Y+ CG + AR VFD + ++ V+W+AM+S + +
Sbjct: 172 IHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDI 231
Query: 84 HLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
AL FS+M + PN ++ S + A + S V G+ IH ++K + VG +
Sbjct: 232 PEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGA 291
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
L+ MY K GY DA V+ +++ ++ LI+ + ++ Q E+ FE+F M+R ++P+
Sbjct: 292 LLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPN 351
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
FS +G L+ C+ L G +H L +K ES FVGN +M +Y+K + + + FR
Sbjct: 352 EFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFR 411
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ + + +SWNT I E LSVF+EM H V TF+S+L ACA AS++
Sbjct: 412 SLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAH-VLSTQVTFSSVLRACANTASIK 470
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
H QIH+ + + N D V N+L++ YAKCG I + K+F ++ +VVSWN II+ +A
Sbjct: 471 HTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYA 530
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
H AL+LF +M + KP+ VTF+ LL+ C GLV +G + FNSM + I P +
Sbjct: 531 LHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSM 590
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH 500
+H+TC++ LLGRAG+L +A ++ P P+V LLS+C + ++V +G+ A+++
Sbjct: 591 DHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLE 650
Query: 501 LQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEF 560
++P + YVLLSN+YA+ G+ VA RK +++ G+KKE S +E++G F+V
Sbjct: 651 IEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSA 710
Query: 561 SHSKIGEINYMLKTLSLAA 579
H + IN ML+ L+L A
Sbjct: 711 DHPDMRIINAMLEWLNLKA 729
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/461 (29%), Positives = 227/461 (49%), Gaps = 11/461 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMG--IQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ LL C + G ++HA V++ G Q D +N +LNLYAK G + AR++FD M
Sbjct: 51 ARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGM 110
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
ERN+VS+ ++ G+ G A F ++ N ++ + + + +
Sbjct: 111 PERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTC 170
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IHA + K G+ +FVG+SLI Y G S A V+ + V++ A+++ + EN
Sbjct: 171 CIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSEND 230
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLE--ICSVSNDLRKGMILHCLTVKCKLESNPFV 238
PE F M G P+ F L+ +C S L KG +H VK ++ P V
Sbjct: 231 IPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKG--IHGCAVKTLCDTEPHV 288
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
G ++ +Y+K I +A F +I D+I W+ I+ + E+ +F M
Sbjct: 289 GGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRS-S 347
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
V P++F+ + +L ACA +A + G+QIH +I++ ++ VGNAL+++YAKC + S
Sbjct: 348 VVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSL 407
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
++F + N VSWNTII + AL +F++M+A + VTF +L AC +
Sbjct: 408 EIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTA 467
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+K + +EK+ + D LID + G + +A
Sbjct: 468 SIKHTVQIHSLIEKS-TFNNDTIVCNSLIDTYAKCGCIRDA 507
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 120/223 (53%), Gaps = 3/223 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+S +L C+ L G +H V+K+G + ++ V N ++++YAKC M + ++F +
Sbjct: 354 SLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSL 413
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ N VSW+ +I G+ Q+G AL F +M H+L + F+S + ACA S+
Sbjct: 414 RDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTV 473
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH+ K + + + V NSLI Y K G DAL V+ + ++VS+NA+I+G+ +
Sbjct: 474 QIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHG 533
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMIL 223
+ E+F M + P+ +F L +C + + +G+ L
Sbjct: 534 RATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSL 576
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 215/607 (35%), Positives = 330/607 (54%), Gaps = 41/607 (6%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARK--------- 58
LL C + L G SLH+ +K I P SNH + LY+KCG++ ARK
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 59 ----------------------VFDEMSERNLVSWSAMISGHHQAGEHLLALEFFS---Q 93
+FD++ E +LVS++ +IS + GE AL FS +
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133
Query: 94 MHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSD 153
M L + + ++ I+AC L+ Q+H+ ++ G+ S V N+L++ Y K G D
Sbjct: 134 MGLDMDGFTLSAVITACCDDVGLIG--QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDD 191
Query: 154 ALLV-YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
A V YG + VS+N++I + ++Q+ K +F+ M+R+GL D F+ A L +
Sbjct: 192 AKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFT 251
Query: 213 VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL-IGEAEKAFRLIEEKDLISWN 271
DL G+ H +K N VG+ ++ LYSK + + K F I E DL+ WN
Sbjct: 252 CLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWN 311
Query: 272 TFIAACSHCADY-EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
T ++ S ++ E L F++M G RP+D +F +++AC+ L+S GKQIH+ +
Sbjct: 312 TMVSGYSQNEEFLEDALECFRQMQGI-GYRPNDCSFVCVISACSNLSSPSQGKQIHSLAL 370
Query: 331 RMRLNQD-VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
+ + + + V NAL+ MY+KCG + + +LF+ M N VS N++IA +A H + +L
Sbjct: 371 KSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESL 430
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
LF+ M I P S+TFI +L+AC H G V+EG YFN M++ + I P+ EH++C+IDL
Sbjct: 431 HLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDL 490
Query: 450 LGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPY 509
LGRAGKL EAE + P I +LL ACR ++ + + A Q+ L+P+ +PY
Sbjct: 491 LGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPY 550
Query: 510 VLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEIN 569
V+LSN+YAS G W +VA RK ++D G+KK+P S IEV+ F + SH I EI
Sbjct: 551 VVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIY 610
Query: 570 YMLKTLS 576
L+ +S
Sbjct: 611 EFLEEMS 617
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 181/395 (45%), Gaps = 41/395 (10%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
F + C + L G+ +H+ +K ++ N I +Y K G + A + +
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 163 EPNLVSFNALIAGFVENQQP-------------------------------EKGFEVFKL 191
+PN+ SFNA+IA + + +P +F
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMI--LHCLTVKCKLESNPFVGNTIMALYSKF 249
M GL D F+ + + C +D+ G+I LH + V +S V N ++ Y K
Sbjct: 131 MREMGLDMDGFTLSAVITAC--CDDV--GLIGQLHSVAVSSGFDSYVSVNNALLTYYGKN 186
Query: 250 NLIGEAEKAFRLIEE-KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
+ +A++ F + +D +SWN+ I A + K L +F+EM G+ D FT AS
Sbjct: 187 GDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVR-RGLNVDMFTLAS 245
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC-GLISCSYKLFNEMLHR 367
+L A L + G Q H LI+ +Q+ VG+ L+++Y+KC G +S K+F E+
Sbjct: 246 VLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEP 305
Query: 368 NVVSWNTIIAAHA-NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
++V WNT+++ ++ N AL+ F QM+ G +P+ +F+ +++AC++ +G+
Sbjct: 306 DLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQI 365
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ K+ S I LI + + G L +A
Sbjct: 366 HSLALKSDIPSNRISVDNALIAMYSKCGNLQDARR 400
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 147/282 (52%), Gaps = 8/282 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKC-GKMILARKVFDE 62
+++S+L + + L G+ H ++K G + V + +++LY+KC G M RKVF+E
Sbjct: 242 TLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEE 301
Query: 63 MSERNLVSWSAMISGHHQAGEHLL-ALEFFSQMHLL---PNEYIFASAISACAGIQSLVK 118
++E +LV W+ M+SG+ Q E L ALE F QM + PN+ F ISAC+ + S +
Sbjct: 302 ITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQ 361
Query: 119 GQQIHAYSLKFGYASISF-VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+QIH+ +LK S V N+LI+MY K G DA ++ E N VS N++IAG+
Sbjct: 362 GKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYA 421
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNP 236
++ + +F+ ML + + P +F L C+ + + +G + + K +E
Sbjct: 422 QHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEA 481
Query: 237 FVGNTIMALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAAC 277
+ ++ L + + EAE R+ I W + + AC
Sbjct: 482 EHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGAC 523
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 207/613 (33%), Positives = 334/613 (54%), Gaps = 75/613 (12%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQP-DVIVSNHVLNLYAKCGKMILARKVF 60
++S + LL C ++ + Q L + QP D + N +L+LYAK G + AR +F
Sbjct: 22 SESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYAKSGNLSDARDLF 81
Query: 61 DEMSERNLVSWSAMISGHHQAG--EHLLA-----------------------------LE 89
D+MS R++ SW+AM+S + ++G E L A LE
Sbjct: 82 DKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALE 141
Query: 90 FFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYM 146
FF +M +Y S + AC+ + + +G+QIH + FV N+L +MY
Sbjct: 142 FFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYA 201
Query: 147 KVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAG 206
K G A ++ N+VS+N++I+G+++N QPE ++F M GL+PD+ +
Sbjct: 202 KCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVT--- 258
Query: 207 GLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKD 266
+SN I++ Y + I EA K FR I+EKD
Sbjct: 259 ------ISN--------------------------ILSAYFQCGYIDEACKTFREIKEKD 286
Query: 267 LISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
+ W T + C+ E L +F+EM ++ VRPD+FT +S++++CA LAS+ G+ +H
Sbjct: 287 KVCWTTMMVGCAQNGKEEDALLLFREMLLEN-VRPDNFTISSVVSSCARLASLCQGQAVH 345
Query: 327 AHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGG 386
+ ++ D+ V +ALV+MY+KCG + ++ +F ML RNV+SWN++I +A +
Sbjct: 346 GKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDL 405
Query: 387 SALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCL 446
AL L+E+M +KPD++TF+G+L+AC HAGLV+ G+ YF S+ K +G++P +H++C+
Sbjct: 406 EALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCM 465
Query: 447 IDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTT 506
I+LLGRAG + +A + K + ++ TLLS CR+ DV GE A+ LF L P
Sbjct: 466 INLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNA 525
Query: 507 SPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKI- 565
PY++LSN+YA+ G W DVA R ++K++ +KK +YS IE+ KF + +HS+
Sbjct: 526 GPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETE 585
Query: 566 ---GEINYMLKTL 575
E+N ++K L
Sbjct: 586 QIYEELNRLIKKL 598
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 202/565 (35%), Positives = 323/565 (57%), Gaps = 16/565 (2%)
Query: 20 QGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHH 79
+G+ +H V+K G+ + VSN ++NLY KCG + AR +FD+ +++V+W++MISG+
Sbjct: 216 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 275
Query: 80 QAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF 136
G L AL F M H+ +E FAS I CA ++ L +Q+H +K+G+
Sbjct: 276 ANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQN 335
Query: 137 VGNSLISMYMKVGYSSDALLVYGEA-FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
+ +L+ Y K DAL ++ E F N+VS+ A+I+GF++N E+ +F M R+
Sbjct: 336 IRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRK 395
Query: 196 GLLPDRFSFA---GGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI 252
G+ P+ F+++ L + S S +H VK E + VG ++ Y K +
Sbjct: 396 GVRPNEFTYSVILTALPVISPSE-------VHAQVVKTNYERSSTVGTALLDAYVKLGKV 448
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
EA K F I+ KD+++W+ +A + + E + +F E++ GV+P++FTF+SIL
Sbjct: 449 DEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKG-GVKPNEFTFSSILNV 507
Query: 313 CAGL-ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
CA AS+ GKQ H I+ RL+ + V +AL+ MYAK G I + ++F +++VS
Sbjct: 508 CAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVS 567
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
WN++I+ +A H AL +F++MK +K DSVTFIG+ AC HAGLV+EGE YF+ M
Sbjct: 568 WNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMV 627
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
+ I+P EH +C++DL RAG+L +A + P + T+L+ACR+ + +G
Sbjct: 628 RDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELG 687
Query: 492 ERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGT 551
A+++ + P ++ YVLLSN+YA G W + A RK++ + +KKEP YS IEV+
Sbjct: 688 RLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNK 747
Query: 552 FEKFTVAEFSHSKIGEINYMLKTLS 576
F + SH +I L+ LS
Sbjct: 748 TYAFLAGDRSHPLKDQIYMKLEDLS 772
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 204/401 (50%), Gaps = 15/401 (3%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G LH +K G DV V +++ Y K R VFDEM ERN+V+W+ +ISG+ +
Sbjct: 116 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYAR 175
Query: 81 AGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
+ L F +M PN + FA+A+ A +G Q+H +K G V
Sbjct: 176 NSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 235
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
NSLI++Y+K G A +++ + ++V++N++I+G+ N + +F M +
Sbjct: 236 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHV 295
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
SFA +++C+ +LR LHC VK + + +M YSK + +
Sbjct: 296 RLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLD--- 352
Query: 258 AFRLIEEK----DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
A RL +E +++SW I+ E+ + +F EM GVRP++FT++ IL A
Sbjct: 353 ALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKR-KGVRPNEFTYSVILTAL 411
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
++ ++HA +++ + VG AL++ Y K G + + K+F+ + ++++V+W+
Sbjct: 412 PVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWS 467
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
++A +A +A+K+F ++ G+KP+ TF +L C
Sbjct: 468 AMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVC 508
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 204/387 (52%), Gaps = 12/387 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S +S++ C+ K L+ LH +V+K G D + ++ Y+KC M+ A ++F E
Sbjct: 301 SFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKET 360
Query: 64 S-ERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
N+VSW+AMISG Q A+ FS+M + PNE+ ++ ++A ++
Sbjct: 361 GFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALP----VISP 416
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
++HA +K Y S VG +L+ Y+K+G +A V+ ++V+++A++AG+ +
Sbjct: 417 SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQA 476
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN-DLRKGMILHCLTVKCKLESNPFV 238
+ E ++F + + G+ P+ F+F+ L +C+ + + +G H +K +L+S+ V
Sbjct: 477 GETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCV 536
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
+ ++ +Y+K I AE+ F+ EKDL+SWN+ I+ + K L VFKEM
Sbjct: 537 SSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKK-RK 595
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIR-MRLNQDVGVGNALVNMYAKCGLISCS 357
V+ D TF + AAC V+ G++ ++R ++ + +V++Y++ G + +
Sbjct: 596 VKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKA 655
Query: 358 YKLFNEMLH-RNVVSWNTIIAAHANHR 383
K+ + M + W TI+AA H+
Sbjct: 656 MKVIDNMPNLAGSTIWRTILAACRVHK 682
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 205/416 (49%), Gaps = 10/416 (2%)
Query: 48 AKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEY---IFA 104
A ++ A +FD+ +R+ S+++++ G + G A F + L E IF+
Sbjct: 42 ASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFS 101
Query: 105 SAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEP 164
S + A + + G+Q+H +KFG+ VG SL+ YMK D V+ E E
Sbjct: 102 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKER 161
Query: 165 NLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILH 224
N+V++ LI+G+ N E+ +F M +G P+ F+FA L + + +G+ +H
Sbjct: 162 NVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 221
Query: 225 CLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYE 284
+ VK L+ V N+++ LY K + +A F E K +++WN+ I+ +
Sbjct: 222 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 281
Query: 285 KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNAL 344
+ L +F M +H VR + +FASI+ CA L ++ +Q+H +++ D + AL
Sbjct: 282 EALGMFYSMRLNH-VRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTAL 340
Query: 345 VNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPD 403
+ Y+KC + + +LF E NVVSW +I+ + A+ LF +MK G++P+
Sbjct: 341 MVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPN 400
Query: 404 SVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
T+ +LTA ++ E + ++ Y S + T L+D + GK+ EA
Sbjct: 401 EFTYSVILTAL---PVISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLGKVDEA 451
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 193/582 (33%), Positives = 327/582 (56%), Gaps = 7/582 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAV-LKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
++++ LL C + K ++ G LH V D +++ ++ +Y+ CG +R VF
Sbjct: 105 SEAMGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVF 164
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISACAGIQSL 116
D++ +NL W+A++S + + A+ FS++ + P+ + I ACAG+ L
Sbjct: 165 DKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDL 224
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVS-FNALIAG 175
GQ IH + K S FVGN+LI+MY K G +A+ + + VS +NAL+ G
Sbjct: 225 GLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCG 284
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+ +N P K +++ M GL PD F+ L CS L G +H ++ L +
Sbjct: 285 YAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVD 344
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
PF+G ++++LY A+ F +E + L+SWN IA S ++ +++F++M +
Sbjct: 345 PFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLS 404
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
D G++P + + AC+ L++++ GK++H ++ L +D+ V +++++MYAK G I
Sbjct: 405 D-GIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIG 463
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
S ++F+ + ++V SWN IIA + H G AL+LFE+M G+KPD TF G+L AC+
Sbjct: 464 LSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACS 523
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
HAGLV++G YFN M + I P +EH+TC++D+LGRAG++ +A ++ P D +
Sbjct: 524 HAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIW 583
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
+LLS+CR+ ++ +GE++A +L L+P YVL+SNL+A G W DV R +KD
Sbjct: 584 SSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDI 643
Query: 536 GLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
GL+K+ S IEV G F + + ++ E+ + L +
Sbjct: 644 GLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEV 685
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 194/557 (34%), Positives = 310/557 (55%), Gaps = 5/557 (0%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+H VLK+G + V N ++ Y K G + A +FDE+SE ++VSW++MI+G G
Sbjct: 217 VHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGF 276
Query: 84 HLLALEFFSQMHLLPNEYIFASAIS---ACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
LE F QM +L E + +S ACA I +L G+ +H + +K ++ N+
Sbjct: 277 SGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNT 336
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
L+ MY K G + A V+ + + +VS+ ++IA +V +F M +G+ PD
Sbjct: 337 LLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPD 396
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
++ + C+ S+ L KG +H +K + SN V N ++ +Y+K + EA F
Sbjct: 397 IYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFS 456
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
I KD++SWNT I S + L +F +M +PDD T A +L ACAGLA++
Sbjct: 457 KIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ--FKPDDITMACVLPACAGLAALD 514
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G++IH H++R D+ V ALV+MYAKCGL+ + LF+ + ++++SW +IA +
Sbjct: 515 KGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYG 574
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
H G A+ F +M+ GI+PD +F +L AC+H+GL+ EG +FNSM G+ P +
Sbjct: 575 MHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKL 634
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH 500
EH+ C++DLL R G L +A ++ + P+ D + G LLS CR+ DV + E++A+ +F
Sbjct: 635 EHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFE 694
Query: 501 LQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEF 560
L+P T YV+L+N+YA W +V RK ++ G K+ P S IEV G F F
Sbjct: 695 LEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNS 754
Query: 561 SHSKIGEINYMLKTLSL 577
H + +I+ +L L++
Sbjct: 755 KHPQAKKIDVLLSKLTM 771
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 140/461 (30%), Positives = 245/461 (53%), Gaps = 8/461 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S S+L C++ K+L+ G +H+ ++ GI D + ++ +Y CG ++ RK+FD++
Sbjct: 96 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKI 155
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+ W+ ++S + + G ++ F +M ++ N Y F + A + + + +
Sbjct: 156 MNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECK 215
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H Y LK G+ S + V NSLI+ Y K G A ++ E EP++VS+N++I G V N
Sbjct: 216 RVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNG 275
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
G E+F ML G+ D + L C+ +L G LH VK N
Sbjct: 276 FSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSN 335
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
T++ +YSK + A + F + + ++SW + IAA Y + +F EM + GVR
Sbjct: 336 TLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQS-KGVR 394
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD +T SI+ ACA +S+ G+ +H+++I+ + ++ V NAL+NMYAKCG + + +
Sbjct: 395 PDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLV 454
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC-NHAGL 419
F+++ +++VSWNT+I ++ + L AL+LF M+ KPD +T +L AC A L
Sbjct: 455 FSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAAL 513
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
K E + + + + Y D+ L+D+ + G L+ A+
Sbjct: 514 DKGREIHGHILRRGY--FSDLHVACALVDMYAKCGLLVLAQ 552
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 71/111 (63%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++ +L C+ AL +G +H +L+ G D+ V+ ++++YAKCG ++LA+ +FD +
Sbjct: 499 TMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMI 558
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACA 111
+++L+SW+ MI+G+ G A+ F++M + P+E F++ ++AC+
Sbjct: 559 PKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACS 609
>gi|449438472|ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
gi|449493172|ref|XP_004159212.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
Length = 605
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 197/547 (36%), Positives = 312/547 (57%), Gaps = 11/547 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCG-KMILARKVFDEMS 64
+SLL C K + +G HA V+K G++ D V N +L+LY K G +L R+VFD +
Sbjct: 64 ASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFDGLF 123
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
+++VSW++MI+G+ + G+ +A+E F M + PN + ++ I AC+ I +LV G+
Sbjct: 124 VKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKC 183
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
H ++ G+ S + +SLI MY + SSDA ++ E EP+ V + +I+ F N
Sbjct: 184 FHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDL 243
Query: 182 PEKGFEVFKLMLR-QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E+ F L R L PD ++F L C LR+G +H + N +
Sbjct: 244 YEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTES 303
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +Y K + ++++ F + ++ +SW+ +A H DYEK +++F+EM
Sbjct: 304 SLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMK-----E 358
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D ++F +++ ACAGLA+V GK+IH IR +DV V +ALV++YAKCG I+ +Y++
Sbjct: 359 VDLYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRV 418
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+ M RN+++WN++I A + G A+++FE M GIKPD ++FIGLL AC+H GLV
Sbjct: 419 FDRMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLV 478
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+ YF+ M YGI P +EH+ C++DLLGRAG L EAE + D + LL
Sbjct: 479 DQARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLG 538
Query: 481 ACRLR-RDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
AC + ER+AK+L L+P YV L+N+Y + G W D R+++K+ LKK
Sbjct: 539 ACTTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKK 598
Query: 540 EPSYSMI 546
P S +
Sbjct: 599 MPGQSWM 605
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 199/370 (53%), Gaps = 12/370 (3%)
Query: 102 IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALL---VY 158
++AS + C + S +G+Q HA+ +K G + FVGNSL+S+Y K+G SD+LL V+
Sbjct: 62 LYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLG--SDSLLTRRVF 119
Query: 159 GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLR 218
F ++VS+ ++I G+V + E+F ML G+ P+ F+ + ++ CS +L
Sbjct: 120 DGLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLV 179
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
G H + V+ +SNP + ++++ +Y + ++ +A + F + E D + W T I+A +
Sbjct: 180 LGKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFT 239
Query: 279 HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
YE+ L F H + PD++TF S+L AC L ++ G++IHA +I + +V
Sbjct: 240 RNDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNV 299
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
++LV+MY KCG + S +LF+ M +RN VSW+ ++A + ++ A+ LF +MK
Sbjct: 300 VTESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEV 359
Query: 399 GIKPDSVTFIGLLTACNHAGLVKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLL 457
D +F ++ AC V G E + + K G D+ + L+DL + G +
Sbjct: 360 ----DLYSFGTVIRACAGLAAVTPGKEIHCQYIRK--GGWRDVIVESALVDLYAKCGCIN 413
Query: 458 EAEEYTKKFP 467
A + P
Sbjct: 414 FAYRVFDRMP 423
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 183/382 (47%), Gaps = 13/382 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++S+++ CS+ L G H V++ G + ++ + ++++Y + AR++FDE+
Sbjct: 164 TLSAVIKACSEIGNLVLGKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDEL 223
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKG 119
E + V W+ +IS + + AL FF H L P+ Y F S ++AC + L +G
Sbjct: 224 LEPDPVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQG 283
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
++IHA + +G++ +SL+ MY K G + ++ N VS++AL+A + N
Sbjct: 284 EEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHN 343
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
EK +F+ M D +SF + C+ + G +HC ++ + V
Sbjct: 344 GDYEKAVNLFREMKE----VDLYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVE 399
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+ ++ LY+K I A + F + ++LI+WN+ I + + +F+ M + G+
Sbjct: 400 SALVDLYAKCGCINFAYRVFDRMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKE-GI 458
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG--NALVNMYAKCGLISCS 357
+PD +F +L AC+ V + + L+ + GV N +V++ + GL+ +
Sbjct: 459 KPDCISFIGLLFACSHTGLVDQARH-YFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEA 517
Query: 358 YKLFNEMLHRNVVS-WNTIIAA 378
L RN S W ++ A
Sbjct: 518 ENLIENAECRNDSSLWLVLLGA 539
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 145/277 (52%), Gaps = 3/277 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S+L C L+QG +HA V+ G +V+ + ++++Y KCG + ++++FD M
Sbjct: 266 TFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFDRM 325
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
S RN VSWSA+++ + G++ A+ F +M + + Y F + I ACAG+ ++ G++IH
Sbjct: 326 SNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEV-DLYSFGTVIRACAGLAAVTPGKEIH 384
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
++ G V ++L+ +Y K G + A V+ NL+++N++I GF +N
Sbjct: 385 CQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFDRMPTRNLITWNSMIHGFAQNGSSG 444
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVGNTI 242
++F+ M+++G+ PD SF G L CS + + + +T K ++ N +
Sbjct: 445 IAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQARHYFDLMTGKYGIKPGVEHYNCM 504
Query: 243 MALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACS 278
+ L + L+ EAE E D W + AC+
Sbjct: 505 VDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGACT 541
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 201/578 (34%), Positives = 330/578 (57%), Gaps = 13/578 (2%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L CS K +G +H + ++ ++ +V VS +++ YAKCG + A++VFD+M +R+
Sbjct: 125 VLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRD 184
Query: 68 LVSWSAMISG---HHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHA 124
+V+W++MISG H + + + L Q + PN + A A + SL G++IH
Sbjct: 185 VVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHG 244
Query: 125 YSLKFGYASISFVGNSLISMYMK---VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+ ++ G+ VG ++ +Y K + Y+ + G N V+++A++ +V
Sbjct: 245 FCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMG--IVKNEVTWSAMVGAYVVCDF 302
Query: 182 PEKGFEVF--KLMLRQGLLP-DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ E+F LML+ ++ + A + +C+ DL G LHC +K + V
Sbjct: 303 MREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMV 362
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
GNT++++Y+K +I A + F ++ +D +S+ I+ + E+GL +F EM G
Sbjct: 363 GNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLS-G 421
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ P+ T AS+L ACA LA + +G H + I D + NAL++MYAKCG I +
Sbjct: 422 INPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTAR 481
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
K+F+ M R +VSWNT+I A+ H +G AL LF+ M++ G+KPD VTFI L++AC+H+G
Sbjct: 482 KVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSG 541
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV EG+ +FN+M + +GI P +EH+ C++DLL RAG E + +K PL D V G L
Sbjct: 542 LVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGAL 601
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
LSACR+ ++V +GE ++K++ L P +T +VLLSN+Y++ G W D A R K+ G +
Sbjct: 602 LSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFE 661
Query: 539 KEPSYSMIEVQGTFEKFTVAEF-SHSKIGEINYMLKTL 575
K P S IE+ G F + SH ++ +I+ L L
Sbjct: 662 KSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDEL 699
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/476 (26%), Positives = 236/476 (49%), Gaps = 26/476 (5%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLK-MGIQPDVIVSN------HVLNLYAKCGKMILARK 58
+ LL C ++K+L +G +H +LK + + ++N +++LY C ++ +AR
Sbjct: 13 TVLLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARH 72
Query: 59 VFDEMSER--NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGI 113
VFD+M R N+V W+ +I + G + A++ + +M + PN + F + AC+ +
Sbjct: 73 VFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSAL 132
Query: 114 QSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALI 173
+ +G++IH + S +V +L+ Y K G DA V+ + + ++V++N++I
Sbjct: 133 KEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMI 192
Query: 174 AGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE 233
+GF ++ + ++ + P+ + G L + N LR G +H V+
Sbjct: 193 SGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFV 252
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKE 292
+ VG I+ +Y K I A + F ++ K+ ++W+ + A C + L +F +
Sbjct: 253 GDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQ 312
Query: 293 --MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
M D + T A+++ CA L + G +H + I+ D+ VGN L++MYAK
Sbjct: 313 LLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAK 372
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGL 410
CG+I+ + + FNEM R+ VS+ II+ + + L++F +M+ +GI P+ T +
Sbjct: 373 CGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASV 432
Query: 411 LTACNH-AGLVKEGEAYFNSMEKTY----GISPDIEHFTCLIDLLGRAGKLLEAEE 461
L AC H AGL ++ S Y G + D LID+ + GK+ A +
Sbjct: 433 LPACAHLAGL------HYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARK 482
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 209/417 (50%), Gaps = 25/417 (5%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ +I +L ++ +L+ G +H ++ G DV+V +L++Y KC + AR++FD
Sbjct: 220 SSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFD 279
Query: 62 EMS-ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAIS------ACAGIQ 114
M +N V+WSAM+ + ALE F Q+ +L ++ I SA++ CA +
Sbjct: 280 MMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLT 339
Query: 115 SLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIA 174
L G +H Y++K G+ VGN+L+SMY K G + A+ + E + VSF A+I+
Sbjct: 340 DLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIIS 399
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
G+V+N E+G +F M G+ P++ + A L C+ L G HC + C +
Sbjct: 400 GYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTA 459
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
+ + N ++ +Y+K I A K F + ++ ++SWNT I A + L +F M
Sbjct: 460 DTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQ 519
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV------GNALVNMY 348
++ G++PDD TF +++AC+ V GK + QD G+ +V++
Sbjct: 520 SE-GLKPDDVTFICLISACSHSGLVAEGKYWFN-----AMTQDFGIIPRMEHYACMVDLL 573
Query: 349 AKCGLISCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSALKLFEQM--KATG 399
++ GL + +M L +V W +++A + N LG K +++ ++TG
Sbjct: 574 SRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTG 630
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 201/578 (34%), Positives = 316/578 (54%), Gaps = 4/578 (0%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + S + S ++ G HA +KM DV V + +LN+Y K G + AR+VFD
Sbjct: 111 AHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFD 170
Query: 62 EMSERNLVSWSAMISGH---HQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVK 118
M ERN V+W+ MISG+ AGE E + NE+ F S +SA A + +
Sbjct: 171 RMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDS 230
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+QIH ++K G + N+L++MY K G D+L V+ + + N ++++A+I G+ +
Sbjct: 231 GKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQ 290
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ K ++F M G+ P F+ G L CS + + +G +H +K ES ++
Sbjct: 291 SGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYI 350
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++ +Y+K + +A K F +++ DL+ W + IA + E LS++ M + G
Sbjct: 351 MTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQME-G 409
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ P++ T AS+L AC+ LA+ G+QIHA I+ L +V +G+AL MYAKCG +
Sbjct: 410 ILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGN 469
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+F M R+++SWN +I+ + + G AL+LFE+M+ KPD VTF+ +L+AC+H G
Sbjct: 470 IVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMG 529
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV G YF M +G+ P +EH+ C++D+L RAGKL EA+E+ + + + L
Sbjct: 530 LVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRIL 589
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L ACR R+ +G ++L L +S YVLLS +Y + G DV R M+K G+
Sbjct: 590 LGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVS 649
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
KEP S IE++ F V + H IGEI + LS
Sbjct: 650 KEPGCSWIELKSNVHVFVVGDQMHPCIGEIRTEILRLS 687
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 140/483 (28%), Positives = 257/483 (53%), Gaps = 10/483 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVI-VSNHVLNLYAKCGKMILARKVFDE 62
S +SL+ + K+LQ+G +LHA ++K+ I ++N ++N YAKC + A+ VFD
Sbjct: 10 SFNSLVQF-THQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDR 68
Query: 63 MSERNLVSWSAMISGHHQAGE--HLLALEFFSQM---HLLPNEYIFASAISACAGIQSLV 117
+ ++++SW+ +I+G+ Q G +E F +M ++LPN + F+ +A + + S+
Sbjct: 69 IHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIF 128
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
GQQ HA ++K FVG+SL++MY K G +A V+ E N V++ +I+G+
Sbjct: 129 FGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYA 188
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ + FEVF+LM R+ + F+F L +V + G +HCL VK L
Sbjct: 189 IQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLS 248
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+ N ++ +Y+K + ++ + F + +K+ I+W+ I + D K L +F M +
Sbjct: 249 ILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRM-HFA 307
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G+ P +FT +L AC+ +V+ GKQ+H +L+++ + + ALV+MYAK G+ +
Sbjct: 308 GINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDA 367
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
K FN + ++V W ++IA + + AL L+ +M+ GI P+ +T +L AC++
Sbjct: 368 RKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNL 427
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
+G ++ YG+ ++ + L + + G L E ++ P +D I
Sbjct: 428 AAFDQGRQ-IHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMP-ERDIISWNA 485
Query: 478 LLS 480
++S
Sbjct: 486 MIS 488
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 195/573 (34%), Positives = 317/573 (55%), Gaps = 4/573 (0%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+S C+ L LHA +K D +V ++++YAK G ++ AR+ F +
Sbjct: 256 ASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPH 315
Query: 66 RNLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQI 122
N+ + +AM+ G + G E + +F ++ + + + SACA ++ +G Q+
Sbjct: 316 HNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQV 375
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H ++K G+ V N+++ +Y K +A LV+ E + + VS+NA+IA +N+
Sbjct: 376 HCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECY 435
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E MLR G+ PD F++ L+ C+ L G+++H +K L + FV +T+
Sbjct: 436 EDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTV 495
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y K I EA+K I ++L+SWN+ I+ S E+ F EM D GV+PD
Sbjct: 496 VDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEML-DMGVKPD 554
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
FT+A++L CA LA+++ GKQIH +I+ + D + + LV+MYAKCG + S +F
Sbjct: 555 HFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFE 614
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+ + VSWN +I +A H G AL++FE+M+ + P+ TF+ +L AC+H GL+ +
Sbjct: 615 KARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDD 674
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G YF+ M Y + P +EHF C++D+LGR+ EA E+ + P+ D +V TLLS C
Sbjct: 675 GCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSIC 734
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
++R+DV + E A + L P S Y+LLSN+YA G W DV+ R++++ L+KEP
Sbjct: 735 KIRQDVEVAETAASNVLRLDPDDASVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEPG 794
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S IEVQ F V + H + E+ ML +L
Sbjct: 795 CSWIEVQSEMHGFLVGDKVHPRSKEVYEMLNSL 827
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/459 (30%), Positives = 241/459 (52%), Gaps = 5/459 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++ LL C L G+ +HA +K G++ DV + ++++Y KC + A + F M
Sbjct: 153 TLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGM 212
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQ 120
ERN VSW A I+G Q ++ +E F QM L ++ +ASA +CA + L +
Sbjct: 213 GERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTAR 272
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HA+++K ++S VG +++ +Y K G DA + N+ + NA++ G V
Sbjct: 273 QLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTG 332
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ ++F+ M R G+ D S +G C+ +G+ +HCL VK + + V N
Sbjct: 333 LGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRN 392
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
I+ LY K + EA F+ +E++D +SWN IAA YE ++ EM G+
Sbjct: 393 AILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRS-GME 451
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PDDFT+ S+L ACAGL S+++G +H I+ L D V + +V+MY KCG I+ + KL
Sbjct: 452 PDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKL 511
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
+ + + +VSWN+II+ + + A + F +M G+KPD T+ +L C + +
Sbjct: 512 HDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATI 571
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+ G+ + K + + T L+D+ + G + ++
Sbjct: 572 ELGKQIHGQIIKQEMLGDEYISST-LVDMYAKCGNMPDS 609
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 145/540 (26%), Positives = 246/540 (45%), Gaps = 51/540 (9%)
Query: 4 SISSLLHHCSKT--KALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ S L C+ AL G + HA +L G P VSN +L +YA+CG A VFD
Sbjct: 19 TFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFD 78
Query: 62 EMSERN-------------------------------LVSWSAMISGHHQAGEHL----L 86
M R+ +VSW+ +ISG+ Q G L
Sbjct: 79 TMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGL 138
Query: 87 ALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYM 146
++E S+ + + A + +C G+ L G QIHA ++K G + G++L+ MY
Sbjct: 139 SME-MSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYG 197
Query: 147 KVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAG 206
K DAL + E N VS+ A IAG V+N+Q +G E+F M R GL + ++A
Sbjct: 198 KCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYAS 257
Query: 207 GLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKD 266
C+ L LH +K S+ VG I+ +Y+K + +A +AF + +
Sbjct: 258 AFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHN 317
Query: 267 LISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
+ + N + + + +F+ M+ GV D + + + +ACA + G Q+H
Sbjct: 318 VETCNAMMVGLVRTGLGAEAMQLFQFMTRS-GVGFDVISLSGVFSACAEVKGYFQGLQVH 376
Query: 327 AHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGG 386
++ + DV V NA++++Y KC + +Y +F EM R+ VSWN IIAA +
Sbjct: 377 CLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYE 436
Query: 387 SALKLFEQMKATGIKPDSVTFIGLLTACN-----HAGLVKEGEAYFNSMEKTYGISPDIE 441
+ +M +G++PD T+ +L AC GLV G+A + G+ D
Sbjct: 437 DTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKS------GLGLDAF 490
Query: 442 HFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHL 501
+ ++D+ + G + EA++ + GQ+ + +++S L + +R ++ +
Sbjct: 491 VSSTVVDMYCKCGAITEAQKLHDRIG-GQELVSWNSIISGFSLTKQSEEAQRFFSEMLDM 549
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 191/415 (46%), Gaps = 53/415 (12%)
Query: 81 AGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
AG +A FS ++ L A AG +L GQ HA L G+ +FV N
Sbjct: 10 AGAGFVATATFSHLYQL----------CASAGRSALTTGQAAHARMLVSGFMPTTFVSNC 59
Query: 141 LISMYMKVGYSSDALLV-------------------------------YGEAFEPNLVSF 169
L+ MY + G ++ A V +G +P++VS+
Sbjct: 60 LLQMYARCGGTAHAHGVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSW 119
Query: 170 NALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK 229
N LI+G+ ++ + M R+G+ DR + A L+ C +DL G+ +H L VK
Sbjct: 120 NTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVK 179
Query: 230 CKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSV 289
LE++ G+ ++ +Y K + +A + F + E++ +SW IA C Y +G+ +
Sbjct: 180 TGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMEL 239
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
F +M G+ +AS +CA + + +Q+HAH I+ + D VG A+V++YA
Sbjct: 240 FVQMQR-LGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYA 298
Query: 350 KCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
K G + + + F + H NV + N ++ LG A++LF+ M +G+ D ++ G
Sbjct: 299 KAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSG 358
Query: 410 LLTACNHAGLVKEGEAYFNSME-----KTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+ +AC E + YF ++ G D+ ++DL G+ L+EA
Sbjct: 359 VFSAC------AEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEA 407
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 205/577 (35%), Positives = 324/577 (56%), Gaps = 4/577 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L C+ + G LH V+ G D +V+N ++ +Y+K G++ A K+F+ M
Sbjct: 75 TFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTM 134
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ N+V+W+ MI+G Q G A FS+M + P+ FAS + + SL +G+
Sbjct: 135 PDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGK 194
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+IH Y L+ G A F+ ++LI +Y K A ++ ++ ++V A+I+G+V N
Sbjct: 195 EIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNG 254
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E+F+ +L + + P+ + A L C+ L G LH +K L+ VG+
Sbjct: 255 LNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGS 314
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
IM +Y+K + A + FR + EKD + WN I CS ++ + +F++M + G+
Sbjct: 315 AIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGRE-GLS 373
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D + ++ L+ACA L ++ HGK IH+ +I+ + +V +AL++MY KCG +S + +
Sbjct: 374 YDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCV 433
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+ M +N VSWN+IIAA+ +H +L LF +M GI+PD VTF+ +L+AC HAG V
Sbjct: 434 FDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQV 493
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+G YF M + YGI +EH+ C++DL GRAG+L EA E K P D V GTLL
Sbjct: 494 DKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLG 553
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ +V + E ++ L L P + YVLLSN++A G WG V R ++K G++K
Sbjct: 554 ACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIRSLMKKRGVQKV 613
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
P YS IEV T F A+ SH + +I +L L L
Sbjct: 614 PGYSWIEVNKTTHMFVAADGSHPESAQIYSVLNNLLL 650
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/429 (30%), Positives = 228/429 (53%), Gaps = 5/429 (1%)
Query: 31 MGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEF 90
MG D V + ++ LYA+ G + AR++FD+M ++ V W+ M++G + GE A++
Sbjct: 1 MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKV 60
Query: 91 FSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMK 147
F M PN FAS +S CA G Q+H + G+ V N+L++MY K
Sbjct: 61 FEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSK 120
Query: 148 VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGG 207
G SDAL ++ + N+V++N +IAGFV+N ++ +F M+ G+ PD +FA
Sbjct: 121 FGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASF 180
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDL 267
L + S L++G +H ++ + + F+ + ++ +Y K +G A K F+ D+
Sbjct: 181 LPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDI 240
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHA 327
+ I+ L +F+ + + + P+ T AS+L ACAGLA++ GK++HA
Sbjct: 241 VVCTAIISGYVLNGLNNDALEIFRWLLEEK-MSPNAVTLASVLPACAGLATLNLGKELHA 299
Query: 328 HLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGS 387
++++ L++ VG+A+++MYAKCG + +Y++F M ++ V WN II + +
Sbjct: 300 NILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQE 359
Query: 388 ALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLI 447
A+ LF QM G+ D V+ L+AC + + G+A + M K ++ + LI
Sbjct: 360 AIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKG-AFDSEVFAESALI 418
Query: 448 DLLGRAGKL 456
D+ G+ G L
Sbjct: 419 DMYGKCGNL 427
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 145/281 (51%), Gaps = 5/281 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A +++S+L C+ L G LHA +LK G+ V + ++++YAKCG++ LA ++F
Sbjct: 275 AVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFR 334
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEY---IFASAISACAGIQSLVK 118
M E++ V W+A+I+ Q G+ A++ F QM Y ++A+SACA + +L
Sbjct: 335 RMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHH 394
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ IH++ +K + S F ++LI MY K G S A V+ E N VS+N++IA +
Sbjct: 395 GKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGS 454
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPF 237
+ E +F ML G+ PD +F L C + + KG+ C+T + + +
Sbjct: 455 HGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARME 514
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAAC 277
I+ L+ + + EA + + + D W T + AC
Sbjct: 515 HYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGAC 555
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 194/566 (34%), Positives = 320/566 (56%), Gaps = 15/566 (2%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+HA V+K G + V + ++N+YAKCG M+ ARKVFD + RN+V W+ +++G+ Q +
Sbjct: 2 VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61
Query: 84 HLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
+A+E F M P+ + + A++AC+ ++S+ G+Q HA+ +K+ + S +GN+
Sbjct: 62 PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
L S+Y K G ++ + E E +++S+ +I+ +N + G +F ML + + P+
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPN 181
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
F+ L +CS GM +H L+ K ESN + N+++ LY K I EA+ F
Sbjct: 182 DFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFN 241
Query: 261 LIEEKDLISWNTFIAACSHCADYEK-----------GLSVFKEMSNDHGVRPDDFTFASI 309
+E K+LI+WN IA + D K L ++ ++ N G +PD FT +SI
Sbjct: 242 RMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKL-NRSGRKPDLFTLSSI 300
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
L C+ LA+++ G+QIHA I+ DV VG ALV+MY KCG I + K F +M R +
Sbjct: 301 LTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTL 360
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNS 429
+SW ++I + A H AL+LFE M+ G +P+ +TF+G+L AC+HAG+V E YF
Sbjct: 361 ISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEI 420
Query: 430 MEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVV 489
M+K Y I P ++H+ CL+D+ R G+L EA + K+ + + + L++ CR +
Sbjct: 421 MQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEE 480
Query: 490 IGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQ 549
+G A+QL L+P +T YV+L N+Y S W DV+ R+++K+ + K +S I ++
Sbjct: 481 LGFYAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSRISIK 540
Query: 550 GTFEKFTVAEFSHSKIGEINYMLKTL 575
G F H+ E++ +L L
Sbjct: 541 GEVHSFKTNNRLHNHNAELHTLLNDL 566
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 206/425 (48%), Gaps = 20/425 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++S L+ CS +++ G HA ++K I D + N + +LY+K G + + K F E
Sbjct: 83 TLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFRET 142
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
E++++SW+ +IS G + L F +M ++ PN++ S +S C+ IQS G
Sbjct: 143 GEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDLGM 202
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG----- 175
Q+H+ S K G+ S + NSL+ +Y+K G +A ++ NL+++NA+IAG
Sbjct: 203 QVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQAM 262
Query: 176 ------FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK 229
F Q + ++ + R G PD F+ + L +CS L +G +H T+K
Sbjct: 263 DLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIK 322
Query: 230 CKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSV 289
S+ VG ++ +Y K I A KAF + + LISW + I + + + L +
Sbjct: 323 SGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHALQL 382
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR-MRLNQDVGVGNALVNMY 348
F++M G RP+ TF +LAAC+ V + + + ++ + LV+M+
Sbjct: 383 FEDM-RLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQKEYKIKPVMDHYGCLVDMF 441
Query: 349 AKCGLISCSYKLFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV-T 406
+ G + ++ + M + N W +IA NH G L + + +KP S T
Sbjct: 442 VRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNH--GNEELGFYAAEQLLKLKPRSTET 499
Query: 407 FIGLL 411
++ LL
Sbjct: 500 YVVLL 504
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 106/194 (54%), Gaps = 1/194 (0%)
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
++H +K FV + ++ +Y+K ++ A K F + ++++ W T + +
Sbjct: 1 MVHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNS 60
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
E + VF +M + G P +FT + L AC+ L S+ GKQ HA +I+ R++ D +G
Sbjct: 61 QPEVAVEVFGDML-ESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIG 119
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
NAL ++Y+K G + S K F E ++V+SW TII+A ++ G L+LF +M ++
Sbjct: 120 NALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVE 179
Query: 402 PDSVTFIGLLTACN 415
P+ T +L+ C+
Sbjct: 180 PNDFTLTSVLSLCS 193
>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
Length = 785
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 189/576 (32%), Positives = 330/576 (57%), Gaps = 15/576 (2%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
CS+ L+ G ++HA + G+ V +SN + ++YA CG+M AR+VFD E + VSW
Sbjct: 113 CSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSW 172
Query: 72 SAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK--GQQIHAYS 126
++++SG+ +AG L+ FS M L N + S I CA + + + +H
Sbjct: 173 NSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCV 232
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP---- 182
+K G + F+ +++I MY K G ++A+ ++ +PN++ FNA+IAGF ++
Sbjct: 233 VKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKE 292
Query: 183 --EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ ++ M +G+ P F+F+ L C+++ + G +H +K + ++G+
Sbjct: 293 VSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGS 352
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ LYS + + + FR + ++D+++W + I+ C +EK L +F+E S +G++
Sbjct: 353 ALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQE-SICYGLK 411
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD FT +S++ ACA LA + G+QI I+ N+ +GN+ ++M A+ G + +
Sbjct: 412 PDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRR 471
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F EM R+VVSW+ +I++HA H AL++F +M + P+ VTF+ +LTAC+H GLV
Sbjct: 472 FQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLV 531
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+G Y+ M+ YG+SP I+H TC++DLLGRAG+L +AE + + D +V +LL+
Sbjct: 532 DDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLA 591
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
+CR+ D+ G+ +A Q+ L+PT+++ YV+L N+Y G + R ++K+ G+KKE
Sbjct: 592 SCRIHGDMERGQLVADQIMDLEPTSSASYVILYNMYLDAGELSLASKTRDLMKERGVKKE 651
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
P S IE++ F + SH E N + K L+
Sbjct: 652 PGLSWIELRSGVHSFVAGDKSHP---ESNAIYKKLA 684
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 131/475 (27%), Positives = 244/475 (51%), Gaps = 26/475 (5%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAK--CGKMILARKVFDEMSE 65
LL C+ AL ++HA + + + + N +L Y + G + A ++ DEM
Sbjct: 8 LLRSCT---ALPHVAAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPR 64
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQQ 121
RN VS++ +IS + +AG ALE F++ L + + +A+A++AC+ L G+
Sbjct: 65 RNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTGKA 124
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+HA ++ G + F+ NSL SMY G +A V+ A E + VS+N+L++G+V
Sbjct: 125 VHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGA 184
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM--ILHCLTVKCKLESNPFVG 239
E+ +VF LM GL + F+ ++ C+ +D+ + + +H VK L+++ F+
Sbjct: 185 REETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLA 244
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD--------YEKGLSVFK 291
+ ++ +Y+K + A F+ + + ++I +N IA C D + LS++
Sbjct: 245 SAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAG--FCRDEAAVGKEVSREALSLYS 302
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
EM + G++P +FTF+SIL AC GKQIH +++ + D +G+AL+++Y+
Sbjct: 303 EMQS-RGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDS 361
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
G + Y+ F + +++V+W ++I+ + L AL+LF++ G+KPD T ++
Sbjct: 362 GCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVM 421
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
AC + + GE + YG + I + R+G + + T++F
Sbjct: 422 NACASLAVARTGEQ-IQCLAIKYGFNRFTAMGNSFIHMCARSG---DVDAVTRRF 472
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 184/372 (49%), Gaps = 14/372 (3%)
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSD--ALLVYGEAFEPNLVSFNALIAGFVEN 179
+HA+ + + F+ NSL++ Y ++G + A + E N VS+N LI+ +
Sbjct: 21 VHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPRRNAVSYNLLISSYSRA 80
Query: 180 QQPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
P + E F GL DRF++A L CS + DLR G +H +TV L + F+
Sbjct: 81 GLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTGKAVHAMTVLDGLGNGVFL 140
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N++ ++Y+ +GEA + F EE D +SWN+ ++ E+ L VF M + HG
Sbjct: 141 SNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVFSLMCH-HG 199
Query: 299 VRPDDFTFASILAACAGLASVQH--GKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
+ + F SI+ CA + V + +H +++ L+ D+ + +A+++MYAK G ++
Sbjct: 200 LGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTN 259
Query: 357 SYKLFNEMLHRNVVSWNTIIA------AHANHRLGGSALKLFEQMKATGIKPDSVTFIGL 410
+ LF + NV+ +N +IA A + AL L+ +M++ G++P TF +
Sbjct: 260 AVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSI 319
Query: 411 LTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQ 470
L ACN AG G+ + K + D + LIDL +G + + + P Q
Sbjct: 320 LRACNLAGEFGFGKQIHGQVLK-HSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLP-KQ 377
Query: 471 DPIVLGTLLSAC 482
D + +++S C
Sbjct: 378 DIVTWTSMISGC 389
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 135/293 (46%), Gaps = 15/293 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+L C+ G +H VLK D + + +++LY+ G M + F +
Sbjct: 315 TFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSL 374
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQ---MHLLPNEYIFASAISACAGIQSLVKGQ 120
++++V+W++MISG Q AL F + L P+ + +S ++ACA + G+
Sbjct: 375 PKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGE 434
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QI ++K+G+ + +GNS I M + G + E ++VS++A+I+ ++
Sbjct: 435 QIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHG 494
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS----VSNDLRKGMILHCLTVKCKLESNP 236
+F M+ + P+ +F L CS V + LR I+ K + +P
Sbjct: 495 CARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIM-----KNEYGLSP 549
Query: 237 FVGNT--IMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKG 286
+ + ++ L + + +AE R D + W + +A+C D E+G
Sbjct: 550 TIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERG 602
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 129/271 (47%), Gaps = 11/271 (4%)
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEE---KDLISWNTFIAACSHCADYEKGLSVFKEM 293
F+ N+++A Y + +G A RLI+E ++ +S+N I++ S + L F
Sbjct: 35 FLRNSLLAAYCRLG-VGAPLHAARLIDEMPRRNAVSYNLLISSYSRAGLPGRALETFARA 93
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
G+R D FT+A+ LAAC+ ++ GK +HA + L V + N+L +MYA CG
Sbjct: 94 RAAAGLRVDRFTYAAALAACSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGE 153
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ + ++F+ + VSWN++++ + LK+F M G+ +S ++
Sbjct: 154 MGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKC 213
Query: 414 CNHAGLVKE--GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQD 471
C V EA + K G+ D+ + +ID+ + G L A K P D
Sbjct: 214 CASGSDVGRHIAEAVHGCVVKA-GLDADLFLASAMIDMYAKRGALTNAVALFKSVP---D 269
Query: 472 P-IVLGTLLSACRLRRDVVIGERLAKQLFHL 501
P +++ + A R + +G+ ++++ L
Sbjct: 270 PNVIVFNAMIAGFCRDEAAVGKEVSREALSL 300
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 198/559 (35%), Positives = 324/559 (57%), Gaps = 4/559 (0%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+HA K+G + V +++ Y+ CG + AR VFD + ++ V+W+AM+S + +
Sbjct: 170 IHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDI 229
Query: 84 HLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
AL FS+M + PN ++ SA+ A + S + G+ IH S+K Y + VG +
Sbjct: 230 PEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGA 289
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
L+ MY K G DA ++ +++ ++ LI+ + ++ Q E+ FE+F M+R ++P+
Sbjct: 290 LLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPN 349
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
FS +G L+ C+ L G +H L +K ES FVGN +M +Y+K + + + F
Sbjct: 350 EFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFS 409
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+++ + +SWNT I E LSVF EM H + TF+S+L ACA +S++
Sbjct: 410 SLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHML-STQVTFSSVLRACANTSSIK 468
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
H QIH+ + + N D V N+L++ YAKCG I + K+F ++ +VVSWN+II+A+A
Sbjct: 469 HAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYA 528
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
H +AL+LF++M + IK + VTF+ LL+ C GLV +G FNSM + I P +
Sbjct: 529 LHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSM 588
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH 500
EH+TC++ LLGRAG+L +A ++ P P+V LLS+C + ++V +G A+++
Sbjct: 589 EHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLD 648
Query: 501 LQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEF 560
++P + YVLLSN+YA+ G+ +VA RK +++ G+KKE S +E++G F+V
Sbjct: 649 IEPHDETTYVLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSA 708
Query: 561 SHSKIGEINYMLKTLSLAA 579
H + IN ML+ L+L A
Sbjct: 709 DHPDMRIINAMLEWLNLKA 727
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 120/223 (53%), Gaps = 3/223 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+S +L C+ L+ G +H +K+G + ++ V N ++++YAKC M + ++F +
Sbjct: 352 SLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSL 411
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ N VSW+ +I G+ Q+G AL F +M H+L + F+S + ACA S+
Sbjct: 412 QDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAV 471
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH+ K + + + V NSLI Y K G+ DAL V+ E ++VS+N++I+ + +
Sbjct: 472 QIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHG 531
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMIL 223
+ E+F M + + + +F L +C + + +G+ L
Sbjct: 532 RATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWL 574
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 149/330 (45%), Gaps = 15/330 (4%)
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP--DRFSFAGGLEICSV 213
++ + P N L++ N + + L LP D ++ A L+ C
Sbjct: 1 MIRSRSLLPTFSQINGLLS---RNLAANEALQWLDDELASLALPKLDSYACARFLQRCIA 57
Query: 214 SNDLRKGMILHCLTVKCK--LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
D R G +H V+ + + F N ++ Y+K + A + F + E++ +S+
Sbjct: 58 RGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFV 117
Query: 272 TFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
T + + ++E+ L +F+ + + G + F +IL + + IHA +
Sbjct: 118 TLMQGYALRGEFEEALELFRRLQRE-GHEVNHFVLTTILKVLVTMDAPGLACGIHACACK 176
Query: 332 MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
+ +++ VG AL++ Y+ CG + + +F+ ++ ++ V+W +++ ++ + + AL
Sbjct: 177 LGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNT 236
Query: 392 FEQMKATGIKPDSVTFIGLLTA--CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
F +M+ TG KP+ L A C + L+ +G + S++ Y P + L+D+
Sbjct: 237 FSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKG-IHGCSVKTLYDTEPHVG--GALLDM 293
Query: 450 LGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
+ G + +A + P D ++L + L
Sbjct: 294 YAKCGDIEDAHAIFEMIP--HDDVILWSFL 321
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 205/630 (32%), Positives = 337/630 (53%), Gaps = 58/630 (9%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + +L CS + GI +H +KMG DV+ + +L++YAKC K+ + + F M
Sbjct: 176 TFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSM 235
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
E+N VSWSA+I+G Q + LE F +M + ++ FAS +CAG+ +L G
Sbjct: 236 PEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGS 295
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H ++LK + + +G + + MYMK SDA ++ NL S+NA+I G+ +
Sbjct: 296 QLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSD 355
Query: 181 Q---------------------PEKGFEVFKLMLRQ---------GLLPDRFSFAGGL-E 209
+ +G +V L ++ + D + G L E
Sbjct: 356 KGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVE 415
Query: 210 ICSVSNDLRK-----------------------GMILHCLTVKCKLESNPFVGNTIMALY 246
C V ++ + +H +K +L + FVG ++ +Y
Sbjct: 416 ACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMY 475
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
SK ++ +AEK + E+ ++SWN I+ S E+ F +M + GV PD+FT+
Sbjct: 476 SKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKML-EMGVDPDNFTY 534
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
A+IL CA L +V+ GKQIHA +I+ L D + + LV+MY+KCG + +F + +
Sbjct: 535 ATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPN 594
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
R+ V+WN ++ +A H LG ALK+FE M+ +KP+ TF+ +L AC H GLV++G Y
Sbjct: 595 RDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHY 654
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRR 486
F+SM YG+ P +EH++C++D++GR+G++ +A E + P D ++ TLLS C++
Sbjct: 655 FHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHG 714
Query: 487 DVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMI 546
+V + E+ A + L+P ++ YVLLSN+YA+ GMW +V RKM++ +GLKKEP S I
Sbjct: 715 NVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWI 774
Query: 547 EVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
E++ F V + +H + EI L L+
Sbjct: 775 EIKSEVHAFLVGDKAHPRSKEIYENLDVLT 804
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 139/535 (25%), Positives = 249/535 (46%), Gaps = 59/535 (11%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKC------------ 50
K+ S + CS KAL G HA ++ +P V V+N ++ +Y KC
Sbjct: 43 KTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDG 102
Query: 51 -------------------GKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFF 91
G + +A+K+FD M ER++VSW+++ISG+ G+H ++ F
Sbjct: 103 MPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVF 162
Query: 92 SQMHLLPNEY---IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKV 148
QM + + FA + +C+ ++ G QIH ++K G+ G++L+ MY K
Sbjct: 163 LQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKC 222
Query: 149 GYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGL 208
++ + E N VS++A+IAG V+N G E+FK M + G+ + +FA
Sbjct: 223 KKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVF 282
Query: 209 EICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLI 268
C+ + LR G LH +K ++ +G + +Y K N + +A+K F + +L
Sbjct: 283 RSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQ 342
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
S+N I + +D G+ D+ + + ACA + G Q+H
Sbjct: 343 SYNAIIVGYAR---------------SDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGL 387
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
++ ++ V NA+++MY KCG + + +F EM+ R+ VSWN IIAAH +
Sbjct: 388 SMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKT 447
Query: 389 LKLF--EQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCL 446
L LF ++ + + DS I L+ + G++++ E + + + +S + +
Sbjct: 448 LSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVS-----WNAI 502
Query: 447 IDLLGRAGKLLEAEE-YTKKFPLGQDP--IVLGTLLSACRLRRDVVIGERLAKQL 498
I + EA++ ++K +G DP T+L C V +G+++ Q+
Sbjct: 503 ISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQI 557
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 189/407 (46%), Gaps = 50/407 (12%)
Query: 86 LALEFFSQMHLLPNEY-IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISM 144
L + FS P + F+ C+ ++L G+Q HA + + FV N LI M
Sbjct: 27 LPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQM 86
Query: 145 YMKVG-----------------YSSDALL--------------VYGEAFEPNLVSFNALI 173
Y+K S +A+L ++ E ++VS+N+LI
Sbjct: 87 YIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLI 146
Query: 174 AGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE 233
+G++ N K +VF M R G + DR +FA L+ CS D G+ +H L VK +
Sbjct: 147 SGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFD 206
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
+ G+ ++ +Y+K + + + F + EK+ +SW+ IA C D GL +FKEM
Sbjct: 207 CDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEM 266
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
GV TFAS+ +CAGL++++ G Q+H H ++ DV +G A ++MY KC
Sbjct: 267 QK-AGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNN 325
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+S + KLFN + + N+ S+N II +A G+ D V+ G A
Sbjct: 326 LSDAQKLFNSLPNHNLQSYNAIIVGYAR--------------SDKGLGLDEVSLSGAFRA 371
Query: 414 CNHAGLVKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
C EG + + SM+ +I ++D+ G+ G L+EA
Sbjct: 372 CAVIKGDLEGLQVHGLSMKSL--CQSNICVANAILDMYGKCGALVEA 416
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 135/321 (42%), Gaps = 33/321 (10%)
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+++ P K + Q + +F+ + CS L G H + + + F
Sbjct: 19 QSKSPFKTLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVF 78
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS---------------------------- 269
V N ++ +Y K + + A K F + ++D +S
Sbjct: 79 VTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERD 138
Query: 270 ---WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
WN+ I+ H D+ K + VF +M G D TFA +L +C+ L G QIH
Sbjct: 139 VVSWNSLISGYLHNGDHRKVIDVFLQMGR-MGTVFDRTTFAVVLKSCSSLEDHGGGIQIH 197
Query: 327 AHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGG 386
++M + DV G+AL++MYAKC + CS + F+ M +N VSW+ IIA +
Sbjct: 198 GLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLR 257
Query: 387 SALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCL 446
L+LF++M+ G+ TF + +C ++ G KT D+ T
Sbjct: 258 GGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKT-DFGTDVVIGTAT 316
Query: 447 IDLLGRAGKLLEAEEYTKKFP 467
+D+ + L +A++ P
Sbjct: 317 LDMYMKCNNLSDAQKLFNSLP 337
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 195/578 (33%), Positives = 322/578 (55%), Gaps = 4/578 (0%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A +++ + S + G H+ +K G DV V + +LN+Y K G + ARK+FD
Sbjct: 118 AHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFD 177
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVK 118
M ERN VSW+ MISG+ + A+E F M + NE+ S +SA +
Sbjct: 178 RMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYT 237
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+Q+H+ ++K G +I V N+L++MY K G DA+ + + + N ++++A++ G+ +
Sbjct: 238 GRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQ 297
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+K ++F M G+LP F+ G + CS + +G +H K +V
Sbjct: 298 GGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYV 357
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
+ ++ +Y+K + +A K F +++ D++ W + I DYE GL+++ +M +
Sbjct: 358 LSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMER- 416
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
V P++ T AS+L AC+ LA++ GKQ+HA +I+ +V +G+AL MY KCG + Y
Sbjct: 417 VIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGY 476
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+F M R+V+SWN +I+ + + G AL+LFE+M GIKPD VTF+ LL+AC+H G
Sbjct: 477 LIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMG 536
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV G YF M + I+P +EH+ C++D+L RAGKL EA+E+ + + + L
Sbjct: 537 LVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRIL 596
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L AC+ R+ +G ++L L +S YVLLS++Y + G +V R+++K G+
Sbjct: 597 LGACKNHRNYELGVYAGEKLVELGSPESSAYVLLSSIYTALGDRENVERVRRIMKARGVN 656
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
KEP S IE++G F V + H ++ EI L+ L+
Sbjct: 657 KEPGCSWIELKGLVHVFVVGDNQHPQVDEIRLELELLT 694
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 146/516 (28%), Positives = 260/516 (50%), Gaps = 43/516 (8%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE--R 66
L C+ K + +G +LHA +LK G + V+N LNLYAK + A +FD +++ +
Sbjct: 18 LIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDK 77
Query: 67 NLVSWSAMI---SGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKG 119
+ VSW+++I S +H + A+ F +M +++PN + A SA + + +V G
Sbjct: 78 DDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAG 137
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q H+ ++K G + +VG+SL++MY K G+ DA ++ E N VS+ +I+G+ +
Sbjct: 138 KQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASS 197
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+K EVF+LM R+ + + F+ L + + G +H L +K L + V
Sbjct: 198 DIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVA 257
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N ++ +Y+K + +A + F +K+ I+W+ + + D +K L +F +M + GV
Sbjct: 258 NALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKM-HSSGV 316
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
P +FT ++ AC+ L +V GKQ+H+ ++ + V +A+V+MYAKCG ++ + K
Sbjct: 317 LPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARK 376
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN---- 415
F + +VV W +II + + L L+ +M+ + P+ +T +L AC+
Sbjct: 377 GFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAA 436
Query: 416 -------HAGLVKEG-----------EAYFN---SMEKTYGI-----SPDIEHFTCLIDL 449
HA ++K G A + S++ Y I S D+ + +I
Sbjct: 437 LDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISG 496
Query: 450 LGRAGKLLEAEEYTKKFPL---GQDPIVLGTLLSAC 482
L + G +A E +K L DP+ LLSAC
Sbjct: 497 LSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSAC 532
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 200/587 (34%), Positives = 346/587 (58%), Gaps = 23/587 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++S+++ + A+ G+ +HA V+K+G + + +V N ++++ +K G + AR VFD M
Sbjct: 205 TVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNM 264
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
++ VSW++MI+GH G+ L A E F+ M L P FAS I +CA ++ L +
Sbjct: 265 ENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVR 324
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL----LVYGEAFEPNLVSFNALIAGF 176
+H +LK G ++ V +L+ K DA L++G ++VS+ A+I+G+
Sbjct: 325 VLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGV---QSVVSWTAMISGY 381
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
++N ++ +F LM R+G+ P+ F+++ I +V + + I H +K E +
Sbjct: 382 LQNGDTDQAVNLFSLMRREGVKPNHFTYS---TILTVQHAVFISEI-HAEVIKTNYEKSS 437
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
VG ++ + K I +A K F LIE KD+I+W+ +A + + E+ +F +++ +
Sbjct: 438 SVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTRE 497
Query: 297 HGVRPDDFTFASILAAC-AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
G++P++FTF SI+ AC A ASV+ GKQ HA+ I++RLN + V ++LV +YAK G I
Sbjct: 498 -GIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIE 556
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
++++F R++VSWN++I+ +A H AL++FE+M+ ++ D++TFIG+++AC
Sbjct: 557 SAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACA 616
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
HAGLV +G+ YFN M + I+P +EH++C+IDL RAG L +A + P V
Sbjct: 617 HAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVW 676
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
+L+A R+ R++ +G+ A+++ L+P ++ YVLLSN+YA+ G W + RK++
Sbjct: 677 RIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKR 736
Query: 536 GLKKEPSYSMIEVQGTFEKFTVAEFSH-------SKIGEINYMLKTL 575
+KKEP YS IEV+ F + SH SK+ E+N L+ +
Sbjct: 737 RVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLSELNTRLRDV 783
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 140/474 (29%), Positives = 243/474 (51%), Gaps = 25/474 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++S +L C+ + G +H +K G+ + V N ++++Y K G + R+VFDEM
Sbjct: 104 TMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEM 163
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+R++VSW+++++G+ + E F M + P+ Y ++ I+A A ++ G
Sbjct: 164 GDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGM 223
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIHA +K G+ + V NSLISM K G DA +V+ + VS+N++IAG V N
Sbjct: 224 QIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVING 283
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
Q + FE F M G P +FA ++ C+ +L +LHC T+K L +N V
Sbjct: 284 QDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLT 343
Query: 241 TIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+M +K I +A F L+ + ++SW I+ D ++ +++F M + GV
Sbjct: 344 ALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRRE-GV 402
Query: 300 RPDDFTFASILAACAGLASVQHG---KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
+P+ FT+++IL +VQH +IHA +I+ + VG AL++ + K G IS
Sbjct: 403 KPNHFTYSTIL-------TVQHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISD 455
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN- 415
+ K+F + ++V++W+ ++A +A A K+F Q+ GIKP+ TF ++ AC
Sbjct: 456 AVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTA 515
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTC----LIDLLGRAGKLLEAEEYTKK 465
V++G+ + Y I + + C L+ L + G + A E K+
Sbjct: 516 PTASVEQGKQF-----HAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKR 564
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 220/435 (50%), Gaps = 24/435 (5%)
Query: 38 IVSNHVLNLYAKC----GKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQ 93
++ +HV+ L A+ A+++FD+ R+L + ++ + + + AL F
Sbjct: 33 LLQSHVVALNARTLLRDSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVS 92
Query: 94 MH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGY 150
++ L P+ Y + +S CAG + G+Q+H +K G VGNSL+ MY K G
Sbjct: 93 LYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGN 152
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
D V+ E + ++VS+N+L+ G+ N+ ++ +E+F LM +G PD ++ + +
Sbjct: 153 VRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAA 212
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
+ + GM +H L VK E+ V N+++++ SK ++ +A F +E KD +SW
Sbjct: 213 LANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSW 272
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDH--GVRPDDFTFASILAACAGLASVQHGKQIHAH 328
N+ IA H + + L F+ +N G +P TFAS++ +CA L + + +H
Sbjct: 273 NSMIAG--HVIN-GQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCK 329
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH--RNVVSWNTIIAAHANHRLGG 386
++ L+ + V AL+ KC I ++ LF+ ++H ++VVSW +I+ + +
Sbjct: 330 TLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFS-LMHGVQSVVSWTAMISGYLQNGDTD 388
Query: 387 SALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE--GEAYFNSMEKTYGISPDIEHFT 444
A+ LF M+ G+KP+ T+ +LT HA + E E + EK+ + T
Sbjct: 389 QAVNLFSLMRREGVKPNHFTYSTILTV-QHAVFISEIHAEVIKTNYEKSSSVG------T 441
Query: 445 CLIDLLGRAGKLLEA 459
L+D + G + +A
Sbjct: 442 ALLDAFVKIGNISDA 456
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 189/575 (32%), Positives = 324/575 (56%), Gaps = 12/575 (2%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
CS+ L+ G ++HA + G+ V VSN ++++Y+KCG+M AR+VFD ER+ VSW
Sbjct: 119 CSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSW 178
Query: 72 SAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQ--SLVKGQQIHAYS 126
++++SG+ +AG + F+ M + N + S I C+G ++ + +H
Sbjct: 179 NSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCV 238
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ----- 181
+K G S F+ +++I MY K G +A ++ EPN+V FN +IAGF +
Sbjct: 239 IKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKE 298
Query: 182 -PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ ++ + +G+ P F+F+ L C+++ L G +H +K + + F+G+
Sbjct: 299 VASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGS 358
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ LY + + + FR + D+++W ++ C +EK LS+F E S G++
Sbjct: 359 ALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHE-SLGAGLK 417
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD FT +S++ ACA LA + G+QI + ++ +GN+ V+MYA+ G + + +
Sbjct: 418 PDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRR 477
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F EM +VVSW+ +I+ HA H AL F++M + P+ +TF+G+LTAC+H GLV
Sbjct: 478 FQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLV 537
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG Y+ +M K YG+SP I+H TC++DLLGRAG+L +AE + DP++ +LL+
Sbjct: 538 DEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLA 597
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
+CR+ RD+ G+ +A ++ L+PT+++ YV+L N+Y G + R ++K G+KKE
Sbjct: 598 SCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKE 657
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P S IE++ F + SH + I L+ +
Sbjct: 658 PGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEM 692
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 230/445 (51%), Gaps = 24/445 (5%)
Query: 37 VIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH- 95
+ + N +L Y + G + AR++ DEM RN VS++ +I + + G L+LE ++
Sbjct: 43 LFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARR 102
Query: 96 --LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSD 153
+ + + +A+A++AC+ L G+ +HA ++ G +S FV NSL+SMY K G +
Sbjct: 103 AGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGE 162
Query: 154 ALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSV 213
A V+ A E + VS+N+L++G+V E+ VF +M R G+ + F+ ++ CS
Sbjct: 163 ARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSG 222
Query: 214 SND--LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
D + +H +K L+S+ F+ + ++ +Y+K + EA FR ++E +++ +N
Sbjct: 223 RGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFN 282
Query: 272 TFIAACSHCADY------EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
T IA + L+++ E+ + G++P +FTF+S+L AC ++ GKQI
Sbjct: 283 TMIAGFCRTETVIGKEVASEALTLYSEVQS-RGMQPTEFTFSSVLRACNLAGYLEFGKQI 341
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
H +I+ +D +G+AL+++Y G + ++ F ++V+W +++ + L
Sbjct: 342 HGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELH 401
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
AL LF + G+KPD T ++ AC + + GE + + + FT
Sbjct: 402 EKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQI-----QCFATKSGFDRFTV 456
Query: 446 L----IDLLGRAGKLLEAEEYTKKF 466
+ + + R+G + + T++F
Sbjct: 457 MGNSCVHMYARSG---DVDAATRRF 478
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 174/355 (49%), Gaps = 11/355 (3%)
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
F+ N+L++ Y ++G A + E N VSFN LI + E R
Sbjct: 44 FLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRA 103
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
G+ DRFS+A L CS + LR G +H L + L S FV N+++++YSK +GEA
Sbjct: 104 GVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEA 163
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
+ F + EE+D +SWN+ ++ E+ + VF M G+ + F S++ C+G
Sbjct: 164 RRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRG-GMGLNSFALGSVIKCCSG 222
Query: 316 L--ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
++ + +H +I+ L+ DV + +A+++MYAK G + + LF + NVV +N
Sbjct: 223 RGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFN 282
Query: 374 TIIAAHAN------HRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYF 427
T+IA + AL L+ ++++ G++P TF +L ACN AG ++ G+
Sbjct: 283 TMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIH 342
Query: 428 NSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
+ K Y D + LIDL +G + + + P D + ++S C
Sbjct: 343 GQVIK-YTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSP-KHDIVTWTAMVSGC 395
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 189/575 (32%), Positives = 324/575 (56%), Gaps = 12/575 (2%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
CS+ L+ G ++HA + G+ V VSN ++++Y+KCG+M AR+VFD ER+ VSW
Sbjct: 119 CSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSW 178
Query: 72 SAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQ--SLVKGQQIHAYS 126
++++SG+ +AG + F+ M + N + S I C+G ++ + +H
Sbjct: 179 NSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCV 238
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ----- 181
+K G S F+ +++I MY K G +A ++ EPN+V FN +IAGF +
Sbjct: 239 IKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKE 298
Query: 182 -PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ ++ + +G+ P F+F+ L C+++ L G +H +K + + F+G+
Sbjct: 299 VASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGS 358
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ LY + + + FR + D+++W ++ C +EK LS+F E S G++
Sbjct: 359 ALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHE-SLGAGLK 417
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD FT +S++ ACA LA + G+QI + ++ +GN+ V+MYA+ G + + +
Sbjct: 418 PDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRR 477
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F EM +VVSW+ +I+ HA H AL F++M + P+ +TF+G+LTAC+H GLV
Sbjct: 478 FQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLV 537
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG Y+ +M K YG+SP I+H TC++DLLGRAG+L +AE + DP++ +LL+
Sbjct: 538 DEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLA 597
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
+CR+ RD+ G+ +A ++ L+PT+++ YV+L N+Y G + R ++K G+KKE
Sbjct: 598 SCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKE 657
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P S IE++ F + SH + I L+ +
Sbjct: 658 PGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEM 692
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 230/445 (51%), Gaps = 24/445 (5%)
Query: 37 VIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH- 95
+ + N +L Y + G + AR++ DEM RN VS++ +I + + G L+LE ++
Sbjct: 43 LFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARR 102
Query: 96 --LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSD 153
+ + + +A+A++AC+ L G+ +HA ++ G +S FV NSL+SMY K G +
Sbjct: 103 AGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGE 162
Query: 154 ALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSV 213
A V+ A E + VS+N+L++G+V E+ VF +M R G+ + F+ ++ CS
Sbjct: 163 ARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSG 222
Query: 214 SND--LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
D + +H +K L+S+ F+ + ++ +Y+K + EA FR ++E +++ +N
Sbjct: 223 RGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFN 282
Query: 272 TFIAACSHCADY------EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
T IA + L+++ E+ + G++P +FTF+S+L AC ++ GKQI
Sbjct: 283 TMIAGFCRTETVIGKEVASEALTLYSEVQS-RGMQPTEFTFSSVLRACNLAGYLEFGKQI 341
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
H +I+ +D +G+AL+++Y G + ++ F ++V+W +++ + L
Sbjct: 342 HGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELH 401
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
AL LF + G+KPD T ++ AC + + GE + + + FT
Sbjct: 402 EKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQI-----QCFATKSGFDRFTV 456
Query: 446 L----IDLLGRAGKLLEAEEYTKKF 466
+ + + R+G + + T++F
Sbjct: 457 MGNSCVHMYARSG---DVDAATRRF 478
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 174/355 (49%), Gaps = 11/355 (3%)
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
F+ N+L++ Y ++G A + E N VSFN LI + E R
Sbjct: 44 FLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRA 103
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
G+ DRFS+A L CS + LR G +H L + L S FV N+++++YSK +GEA
Sbjct: 104 GVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEA 163
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
+ F + EE+D +SWN+ ++ E+ + VF M G+ + F S++ C+G
Sbjct: 164 RRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRG-GMGLNSFALGSVIKCCSG 222
Query: 316 L--ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
++ + +H +I+ L+ DV + +A+++MYAK G + + LF + NVV +N
Sbjct: 223 RGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFN 282
Query: 374 TIIAAHAN------HRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYF 427
T+IA + AL L+ ++++ G++P TF +L ACN AG ++ G+
Sbjct: 283 TMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIH 342
Query: 428 NSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
+ K Y D + LIDL +G + + + P D + ++S C
Sbjct: 343 GQVIK-YTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSP-KHDIVTWTAMVSGC 395
>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
Length = 803
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 215/643 (33%), Positives = 341/643 (53%), Gaps = 78/643 (12%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++S+L C AL G H +K+G+ + V N +L +Y KCG + A ++F M
Sbjct: 143 TLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGM 202
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM--HLLPNEYIFASAI-----SACAGIQSL 116
+ N VS++AM+ G Q G AL F++M +P + + S++ ACA S+
Sbjct: 203 ARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSV 262
Query: 117 VK----GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGE------------ 160
+ GQ IHA ++ G+ S VGNSLI MY K +A+ V+
Sbjct: 263 ARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNIL 322
Query: 161 -----------------------AFEPNLVSF---------------------------- 169
FEPN V++
Sbjct: 323 ITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSV 382
Query: 170 ---NALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCL 226
N L++G+ + +Q + E+F+ M Q + PDR + A L CS L G +H
Sbjct: 383 TTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSA 442
Query: 227 TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKG 286
+V+ L ++ FV + ++ +YSK IG A F + E+D++ WN+ I+ + + ++
Sbjct: 443 SVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEA 502
Query: 287 LSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVN 346
FK+M ++G+ P + ++AS++ +C+ L+S+ HG+QIHA +++ +Q+V VG+AL++
Sbjct: 503 FDFFKQM-RENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALID 561
Query: 347 MYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVT 406
MYAKCG + + F+ M+ +N+V+WN +I +A + LG A++LFE M T KPD+VT
Sbjct: 562 MYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVT 621
Query: 407 FIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
FI +LT C+H+GLV + A+FNSME +YGI P EH+TCLID LGRAG+ +E E K
Sbjct: 622 FIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKM 681
Query: 467 PLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVA 526
P DPI+ LL+AC + + +G+ A+ LF + P SPYVLLSN+YAS G GD +
Sbjct: 682 PCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLSNIYASLGRHGDAS 741
Query: 527 GARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEIN 569
R ++ + G+ K YS I+ + F VA+ + GE+
Sbjct: 742 AVRALMSNRGVVKGRGYSWIDQKDGVRAFMVADDLGADGGELT 784
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 200/435 (45%), Gaps = 51/435 (11%)
Query: 35 PDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG-HHQAGEHLLALEFFSQ 93
P+ N L+ + G + AR + M RN VSW+ +IS G+ A+E + +
Sbjct: 72 PNDYSYNAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGGEAVEMYGR 131
Query: 94 MH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGY 150
M LLP + AS +SAC G+ +L G++ H ++K G + FV N+L+ MY K G
Sbjct: 132 MRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGS 191
Query: 151 SSDAL-LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
DA+ L YG A PN VSF A++ G + + +F M R G+ D S + L
Sbjct: 192 VGDAVRLFYGMA-RPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLG 250
Query: 210 IC--------SVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRL 261
C SV+ R G +H L V+ S+ VGN+++ +Y+K + EA K F
Sbjct: 251 ACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFES 310
Query: 262 IEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQH 321
+ ++SWN I K + V M + G P++ T++++LA+C
Sbjct: 311 LPSVTIVSWNILITGFGQEGSCAKAVEVLSLM-QEAGFEPNEVTYSNLLASCI------K 363
Query: 322 GKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN 381
+ +H+ + +F+++ +V +WNT+++ +
Sbjct: 364 ARDVHS-----------------------------ARAMFDKISRPSVTTWNTLLSGYCQ 394
Query: 382 HRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIE 441
++LF +M+ ++PD T +L++C+ G++ G +S + + D+
Sbjct: 395 EEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGR-QVHSASVRFLLHNDMF 453
Query: 442 HFTCLIDLLGRAGKL 456
+ L+D+ + G++
Sbjct: 454 VASGLVDMYSKCGQI 468
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 3/202 (1%)
Query: 218 RKGMILHCLTVKCKLES-NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
R G+ H L L S N + N ++ + + A + ++ +SWNT I+A
Sbjct: 55 RAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISA 114
Query: 277 CSHC-ADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN 335
+ D + + ++ M + G+ P FT AS+L+AC GLA++ G++ H +++ L+
Sbjct: 115 LARSPGDGGEAVEMYGRMRAE-GLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLD 173
Query: 336 QDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM 395
+ V NAL+ MY KCG + + +LF M N VS+ ++ A AL+LF +M
Sbjct: 174 ANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARM 233
Query: 396 KATGIKPDSVTFIGLLTACNHA 417
+G+ D V+ +L AC A
Sbjct: 234 CRSGVPVDPVSVSSVLGACAQA 255
>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 190/548 (34%), Positives = 306/548 (55%), Gaps = 10/548 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMIL-ARKVFDEMS 64
+SLL C+K + GI H+ +K G+ D V N +L LY K G + AR+VFD +
Sbjct: 64 ASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFDGLF 123
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQ 121
++L+SW++MI+G+ + + +LE F +M L PN + ++ I AC+G+ L G+
Sbjct: 124 YKDLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKC 183
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
H + G+ + +LI MY + DA+LV+ E +P+ + + ++I+ F N
Sbjct: 184 FHGVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELPQPDAICWTSIISAFTRNDV 243
Query: 182 PEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+K F M R+ GL PD F+F L C L++G +H + L N FV +
Sbjct: 244 YDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVES 303
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +Y K L+ +++ F + K+L+SW + D+E + +F+E G +
Sbjct: 304 SLVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALLGGYCQNGDFESVIRIFRE-----GKK 358
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D ++F ++L ACAGLA+V+ GK++H ++ +DV +ALV++YAKCG I +Y++
Sbjct: 359 VDTYSFGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDVVTESALVDLYAKCGCIDFAYRI 418
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F M RN+++WN++I A + GG +LF++M GI+PD ++F+G+L AC+HAGLV
Sbjct: 419 FVRMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRPDYISFVGVLFACSHAGLV 478
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+G+ YF +M + Y I P IEH+ C+IDLLGRAG L EAE + +P + LL
Sbjct: 479 DQGKKYFAAMTEVYEIKPGIEHYNCMIDLLGRAGLLEEAENLIENANCRDEPSLWTVLLG 538
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC ER+AK+ L+P YV L+N+Y + G W D R ++ G+ K
Sbjct: 539 ACAASPHSATAERIAKKAVELKPDHHLSYVYLANVYRAVGRWDDAVKIRNLMTKRGVGKM 598
Query: 541 PSYSMIEV 548
P S IE
Sbjct: 599 PGTSWIET 606
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 199/374 (53%), Gaps = 8/374 (2%)
Query: 83 EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLI 142
E + L L + +AS + C S G Q H++++K G + FVGNSL+
Sbjct: 43 EAIHVLNSIDWTRLSNKPFFYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLL 102
Query: 143 SMYMKVGYS-SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDR 201
++Y K+G + +A V+ F +L+S+ ++I G+V+ ++P+K E+F ML G+ P+
Sbjct: 103 ALYFKLGPNLFEARRVFDGLFYKDLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNG 162
Query: 202 FSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRL 261
F+ + ++ CS DLR G H + + + N + ++ +Y + + + +A F
Sbjct: 163 FTLSAVIKACSGLGDLRLGKCFHGVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVE 222
Query: 262 IEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQH 321
+ + D I W + I+A + Y+K L F M HG+ PD FTF ++L AC L ++
Sbjct: 223 LPQPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQ 282
Query: 322 GKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN 381
GK++HA +I L+ +V V ++LV+MY KC L++ S +F+ M +N+VSW ++ +
Sbjct: 283 GKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALLGGYCQ 342
Query: 382 HRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG-EAYFNSMEKTYGISPDI 440
+ S +++F + G K D+ +F +L AC V++G E + +++ D+
Sbjct: 343 NGDFESVIRIFRE----GKKVDTYSFGTVLRACAGLAAVRQGKEVHCQYVKRC--CWRDV 396
Query: 441 EHFTCLIDLLGRAG 454
+ L+DL + G
Sbjct: 397 VTESALVDLYAKCG 410
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 151/300 (50%), Gaps = 8/300 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++L C L+QG +HA V+ G+ +V V + ++++Y KC + ++ VFD M
Sbjct: 266 TFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRM 325
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
S +NLVSW+A++ G+ Q G+ + F + + + Y F + + ACAG+ ++ +G+++H
Sbjct: 326 SVKNLVSWTALLGGYCQNGDFESVIRIFREGKKV-DTYSFGTVLRACAGLAAVRQGKEVH 384
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+K ++L+ +Y K G A ++ NL+++N++I GF +N +
Sbjct: 385 CQYVKRCCWRDVVTESALVDLYAKCGCIDFAYRIFVRMSVRNLITWNSMIYGFAQNGRGG 444
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG--NT 241
+ F++F M+ +G+ PD SF G L CS + + +G + E P + N
Sbjct: 445 EVFQLFDEMIEEGIRPDYISFVGVLFACSHAGLVDQGKKYFAAMTEV-YEIKPGIEHYNC 503
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLIS-WNTFIAACS---HCADYEKGLSVFKEMSNDH 297
++ L + L+ EAE +D S W + AC+ H A E+ E+ DH
Sbjct: 504 MIDLLGRAGLLEEAENLIENANCRDEPSLWTVLLGACAASPHSATAERIAKKAVELKPDH 563
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 97/186 (52%), Gaps = 4/186 (2%)
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL-ISCSYKLFN 362
F +AS+L C S HG Q H+H I+ L+ D VGN+L+ +Y K G + + ++F+
Sbjct: 61 FFYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFD 120
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+ +++++SW ++I + +L+LF +M GI+P+ T ++ AC+ G ++
Sbjct: 121 GLFYKDLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRL 180
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G+ F+ + G + T LID+ GR + +A + P D I +++SA
Sbjct: 181 GKC-FHGVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELP-QPDAICWTSIISA- 237
Query: 483 RLRRDV 488
R DV
Sbjct: 238 FTRNDV 243
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 199/565 (35%), Positives = 324/565 (57%), Gaps = 16/565 (2%)
Query: 20 QGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHH 79
+G+ +H V+K G+ + VSN ++NLY KCG + AR +FD+ +++V+W++MISG+
Sbjct: 212 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 80 QAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF 136
G L AL F M L +E FAS I CA ++ L +Q+H +K+G+
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 137 VGNSLISMYMKVGYSSDALLVYGE-AFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
+ +L+ Y K DAL ++ E N+VS+ A+I+GF++N E+ ++F M R+
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 196 GLLPDRFSFA---GGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI 252
G+ P+ F+++ L + S S +H VK E + VG ++ Y K +
Sbjct: 392 GVRPNEFTYSVILTALPVISPSE-------VHAQVVKTNYERSSTVGTALLDAYVKLGKV 444
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
EA K F I++KD+++W+ +A + + E + +F E++ G++P++FTF+SIL
Sbjct: 445 EEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKG-GIKPNEFTFSSILNV 503
Query: 313 CAGL-ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
CA AS+ GKQ H I+ RL+ + V +AL+ MYAK G I + ++F +++VS
Sbjct: 504 CAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVS 563
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
WN++I+ +A H AL +F++MK +K D VTFIG+ AC HAGLV+EGE YF+ M
Sbjct: 564 WNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMV 623
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
+ I+P EH +C++DL RAG+L +A + + P + T+L+ACR+ + +G
Sbjct: 624 RDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELG 683
Query: 492 ERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGT 551
A+++ ++P ++ YVLLSN+YA G W + A RK++ + +KKEP YS IEV+
Sbjct: 684 RLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNK 743
Query: 552 FEKFTVAEFSHSKIGEINYMLKTLS 576
F + SH +I L+ LS
Sbjct: 744 TYSFLAGDRSHPLKDQIYMKLEDLS 768
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 225/454 (49%), Gaps = 19/454 (4%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G LH +K G DV V +++ Y K RKVFDEM ERN+V+W+ +ISG+ +
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 81 AGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
+ L F +M PN + FA+A+ A +G Q+H +K G V
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
NSLI++Y+K G A +++ + ++V++N++I+G+ N + +F M +
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
SFA +++C+ +LR LHC VK + + +M YSK + +A +
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351
Query: 258 AFRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
F+ I +++SW I+ E+ + +F EM GVRP++FT++ IL A +
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKR-KGVRPNEFTYSVILTALPVI 410
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
+ ++HA +++ + VG AL++ Y K G + + K+F+ + +++V+W+ ++
Sbjct: 411 SP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAML 466
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL-VKEGEAYFNSMEKTYG 435
A +A +A+K+F ++ GIKP+ TF +L C + +G+ + +
Sbjct: 467 AGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHG-----FA 521
Query: 436 ISPDIEHFTC----LIDLLGRAGKLLEAEEYTKK 465
I ++ C L+ + + G + AEE K+
Sbjct: 522 IKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKR 555
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 217/413 (52%), Gaps = 15/413 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S +S++ C+ K L+ LH +V+K G D + ++ Y+KC M+ A ++F E+
Sbjct: 297 SFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEI 356
Query: 64 S-ERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
N+VSW+AMISG Q A++ FS+M + PNE+ ++ ++A ++
Sbjct: 357 GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP----VISP 412
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
++HA +K Y S VG +L+ Y+K+G +A V+ + ++V+++A++AG+ +
Sbjct: 413 SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQT 472
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN-DLRKGMILHCLTVKCKLESNPFV 238
+ E ++F + + G+ P+ F+F+ L +C+ +N + +G H +K +L+S+ V
Sbjct: 473 GETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCV 532
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
+ ++ +Y+K I AE+ F+ EKDL+SWN+ I+ + K L VFKEM
Sbjct: 533 SSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKK-RK 591
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIR-MRLNQDVGVGNALVNMYAKCGLISCS 357
V+ D TF + AAC V+ G++ ++R ++ + +V++Y++ G + +
Sbjct: 592 VKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKA 651
Query: 358 YKLFNEMLH-RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP-DSVTFI 408
K+ M + W TI+AA H+ + L K +KP DS ++
Sbjct: 652 MKVIENMPNPAGSTIWRTILAACRVHK--KTELGRLAAEKIIAMKPEDSAAYV 702
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 202/408 (49%), Gaps = 10/408 (2%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEY---IFASAISACAG 112
A +FD+ R+ S+ +++ G + G A F +H L E IF+S + A
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
+ + G+Q+H +KFG+ VG SL+ YMK D V+ E E N+V++ L
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 173 IAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
I+G+ N ++ +F M +G P+ F+FA L + + +G+ +H + VK L
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
+ V N+++ LY K + +A F E K +++WN+ I+ + + L +F
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
M ++ VR + +FAS++ CA L ++ +Q+H +++ D + AL+ Y+KC
Sbjct: 286 MRLNY-VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCT 344
Query: 353 LISCSYKLFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
+ + +LF E+ NVVSW +I+ + A+ LF +MK G++P+ T+ +L
Sbjct: 345 AMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL 404
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
TA ++ E + ++ Y S + T L+D + GK+ EA
Sbjct: 405 TAL---PVISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLGKVEEA 447
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 209/634 (32%), Positives = 328/634 (51%), Gaps = 74/634 (11%)
Query: 1 MAKSISS----LLHHCSKTKALQQGISLHAAVLK-MGIQPDVIVSNHVLNLYAKCGKMIL 55
M++ +SS LL ++T+ G +LH +L+ + P + NH+L Y K G+
Sbjct: 1 MSRPLSSQYAALLSAAARTEPHAAG-ALHCVILRTLPHPPPTHLLNHLLTAYGKAGRHAR 59
Query: 56 ARKVFD-------------------------------EMSERNLVSWSAMISGHHQAGEH 84
AR+VFD M++R+ VS++A+I+G G H
Sbjct: 60 ARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAH 119
Query: 85 LLALEFFSQM-----HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
A+ + + + P+ ++ + A + + G+Q H L+ G+ +FVG+
Sbjct: 120 ARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGS 179
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG------------------------ 175
L+ MY K+G DA V+ E N+V +N +I G
Sbjct: 180 PLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCIT 239
Query: 176 -------FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV 228
F +N + F+ M QG+ D+++F L C + L +G +H +
Sbjct: 240 WTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYII 299
Query: 229 KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLS 288
+ + N FVG+ ++ +YSK I AE AFR + K++ISW I E+ +
Sbjct: 300 RTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVR 359
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMY 348
VF EM D G+ PDDFT S++++CA LAS++ G Q H + L + V NALV +Y
Sbjct: 360 VFSEMQRD-GIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLY 418
Query: 349 AKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
KCG I +++LF+EML + VSW ++ +A + LFE+M A +KPD VTFI
Sbjct: 419 GKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFI 478
Query: 409 GLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
G+L+AC+ AG V++G +YF+SM+K +GI P +H+TC+IDL R+G+L EAEE+ K+ P+
Sbjct: 479 GVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPM 538
Query: 469 GQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGA 528
D I GTLLSACRLR D+ IG+ A+ L + P + YVLL +++A+ G W VA
Sbjct: 539 HPDAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQL 598
Query: 529 RKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
R+ ++D +KKEP S I+ + F+ + SH
Sbjct: 599 RRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSH 632
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 199/572 (34%), Positives = 321/572 (56%), Gaps = 13/572 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCG-KMILARKVFDEMS 64
+SLL C+K A G+ +HA V+K G++ D V N +L LY K G RKVFD +
Sbjct: 63 ASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLF 122
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
++++SW++MISG+ + G+ + +LE F +M + PN + ++ I AC+ + L G+
Sbjct: 123 VKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRI 182
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
H L G+ S + ++LI M+ + DA ++ E EP+ + + ++I+ N
Sbjct: 183 FHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDF 242
Query: 182 PEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
++ F M R G+ PD F+F L C L++G +H + N V +
Sbjct: 243 FDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVES 302
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +Y K +GE+++ F + K+ +SW+ + D++ + +F++M +
Sbjct: 303 SLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKME-----K 357
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D + F +IL CAGLA+V+ GK++H IR +DV V +ALV++YAKCG I + +
Sbjct: 358 VDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTI 417
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F++M RN+++WN++I A + G AL++F QM GIKPD ++FIG+L AC+H GLV
Sbjct: 418 FDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLV 477
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG YF SM K YGI IEH++C++DLLGRAG L EAE + D + LL
Sbjct: 478 DEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLG 537
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC + I ER+AK++ L+P YVLL+N+Y + G W D R+++KD G+ K
Sbjct: 538 ACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKM 597
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKI-GEINYM 571
P S IE + + +F +S + GE N++
Sbjct: 598 PGKSWIETKNNLG--SSFDFENSLVPGESNFL 627
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 196/369 (53%), Gaps = 8/369 (2%)
Query: 102 IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS-SDALLVYGE 160
++AS + C + + G QIHA+ +K G FVGNSL+++Y K+G + V+
Sbjct: 61 LYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDG 120
Query: 161 AFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKG 220
F +++S+ ++I+G+V +P E+F ML G+ P+ F+ + ++ CS DL+ G
Sbjct: 121 LFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLG 180
Query: 221 MILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHC 280
I H + + +SN + + ++ ++ + + +A + F + E D I W + I+A +
Sbjct: 181 RIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRN 240
Query: 281 ADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV 340
+++ L F M DHG+ PD FTF ++L AC L ++ GK++HA +I +V V
Sbjct: 241 DFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVV 300
Query: 341 GNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGI 400
++LV+MY KCG + S ++F+ M +N VSW+ ++ + + S +++F +M+
Sbjct: 301 ESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKME---- 356
Query: 401 KPDSVTFIGLLTACNHAGLVKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
K D F +L C V++G E + + K G D+ + L+DL + G + A
Sbjct: 357 KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRK--GGWRDVIVESALVDLYAKCGCIEYA 414
Query: 460 EEYTKKFPL 468
+ + P+
Sbjct: 415 QTIFDQMPV 423
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 194/386 (50%), Gaps = 17/386 (4%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++S+++ CS+ L+ G H VL G + ++++ +++++ + + AR++FD
Sbjct: 161 AFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFD 220
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLV 117
E+ E + + W+++IS + AL FF M + P+ + F + ++AC + L
Sbjct: 221 ELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLK 280
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+G+++HA + G+ V +SL+ MY K G ++ ++ N VS++AL+ G+
Sbjct: 281 QGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYC 340
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+N + ++F+ M + D + F L C+ +R+G +HC ++ +
Sbjct: 341 QNGDFKSVIQIFRKMEK----VDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVI 396
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V + ++ LY+K I A+ F + ++LI+WN+ I + E+ L +F +M +
Sbjct: 397 VESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKE- 455
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG----NALVNMYAKCGL 353
G++PD +F IL AC+ V G++ + I M + + VG + +V++ + GL
Sbjct: 456 GIKPDYISFIGILFACSHRGLVDEGRE---YFISMTKDYGIKVGIEHYSCMVDLLGRAGL 512
Query: 354 ISCSYKLFNEMLHRNVVS-WNTIIAA 378
+ + L R+ S W ++ A
Sbjct: 513 LEEAEILIETSDFRDDSSLWAALLGA 538
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 175/346 (50%), Gaps = 25/346 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++L C L+QG +HA V+ G +V+V + ++++Y KCG + ++++FD M
Sbjct: 265 TFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRM 324
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
+N VSWSA++ G+ Q G+ ++ F +M + + Y F + + CAG+ ++ +G+++H
Sbjct: 325 PIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKV-DLYCFGTILRTCAGLAAVRQGKEVH 383
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
++ G V ++L+ +Y K G A ++ + NL+++N++I GF +N + E
Sbjct: 384 CQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGE 443
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ +F M+++G+ PD SF G L CS +G++ + + + I
Sbjct: 444 EALRIFNQMVKEGIKPDYISFIGILFACS-----HRGLVDEGREYFISMTKDYGIKVGIE 498
Query: 244 ALYSKFNLIGEA---EKAFRLIEEKDLIS----WNTFIAACSHCADYEKGLSVFKEMSND 296
+L+G A E+A LIE D W + AC+ C +YE + K +
Sbjct: 499 HYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVME- 557
Query: 297 HGVRPDDFTFASILAACAGLASVQH--GKQIHAHLIRMRLNQDVGV 340
+ P D+ + +L LA+V G+ A IR RL +D GV
Sbjct: 558 --LEP-DYHLSYVL-----LANVYKAVGRWNDALRIR-RLMKDRGV 594
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 97/177 (54%), Gaps = 3/177 (1%)
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL-ISCSYKLFNEM 364
+AS+L C + + HG QIHAH+I+ L D VGN+L+ +Y K G + K+F+ +
Sbjct: 62 YASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGL 121
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
++V+SW ++I+ + ++L+LF +M A G++P++ T ++ AC+ G +K G
Sbjct: 122 FVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGR 181
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
F+ + G + + LID+ GR L +A + + L D I +++SA
Sbjct: 182 I-FHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDEL-LEPDAICWTSIISA 236
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 199/623 (31%), Positives = 331/623 (53%), Gaps = 54/623 (8%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCG----------- 51
++ S+L C+ K++Q G +H+ + ++ D ++ + ++ +Y CG
Sbjct: 102 RTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDK 161
Query: 52 ----KMIL----------------------------------ARKVFDEMSERNLVSWSA 73
K+ L ARK+FDE+ +R+++SW++
Sbjct: 162 VANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNS 221
Query: 74 MISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQS---LVKGQQIHAYSLKFG 130
MISG+ G L+ F QM LL A+ +S AG + L+ G+ +H Y++K
Sbjct: 222 MISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKAS 281
Query: 131 YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFK 190
+ + N L+ MY K G + A+ V+ E ++VS+ ++IAG+ + +F
Sbjct: 282 FGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFH 341
Query: 191 LMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN 250
M ++G+ PD F+ L C+ + L G +H + K++S+ FV N +M +Y+K
Sbjct: 342 EMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCG 401
Query: 251 LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
+G+A F ++ KD++SWNT I S + + L++F EM + +P+ T A IL
Sbjct: 402 SMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQ--YNSKPNSITMACIL 459
Query: 311 AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVV 370
ACA LA+++ G++IH H++R + D V NALV+MY KCG + + LF+ + +++V
Sbjct: 460 PACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLV 519
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSM 430
SW +IA + H G A+ F +M+ +GI+PD V+FI +L AC+H+GL+ EG +FN M
Sbjct: 520 SWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMM 579
Query: 431 EKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVI 490
I P EH+ C++DLL RAG L +A ++ K P+ D + G LL CR+ DV +
Sbjct: 580 RNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKL 639
Query: 491 GERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQG 550
E++A+ +F L+P T YVLL+N+YA W +V R+ + GL+K P S IE++G
Sbjct: 640 AEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKG 699
Query: 551 TFEKFTVAEFSHSKIGEINYMLK 573
F + SH +I +LK
Sbjct: 700 KVHIFVTGDSSHPLANKIELLLK 722
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 125/292 (42%), Gaps = 68/292 (23%)
Query: 281 ADYEKGLSVFKEMSN--------DHGVRPDD--FTFASILAACAGLASVQHGKQIHAHLI 330
DY + F E+ N + +PD T+ S+L CA L S+Q G++IH+ +
Sbjct: 69 TDYNIEICRFCELGNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQ 128
Query: 331 RMRLNQDVGVGNALVNMYAKCG-------------------------------------- 352
+ D +G+ LV MY CG
Sbjct: 129 SNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLS 188
Query: 353 -----------LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
+ + KLF+E+ R+V+SWN++I+ + ++ L L LFEQM GI
Sbjct: 189 LFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGIN 248
Query: 402 PDSVTFIGLLTACNHAGLVKEGEAYFN-SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
D T + ++ C++ G++ G A +++ ++G ++ CL+D+ ++G L A
Sbjct: 249 TDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFG--KELTLNNCLLDMYSKSGNLNSAI 306
Query: 461 EYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH-LQPTTTSPYVL 511
+ + +G+ +V T + A R + ++ +LFH ++ SP +
Sbjct: 307 QVFET--MGERSVVSWTSMIAGYAREGL---SDMSVRLFHEMEKEGISPDIF 353
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 199/572 (34%), Positives = 321/572 (56%), Gaps = 13/572 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCG-KMILARKVFDEMS 64
+SLL C+K A G+ +HA V+K G++ D V N +L LY K G RKVFD +
Sbjct: 122 ASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLF 181
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
++++SW++MISG+ + G+ + +LE F +M + PN + ++ I AC+ + L G+
Sbjct: 182 VKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRI 241
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
H L G+ S + ++LI M+ + DA ++ E EP+ + + ++I+ N
Sbjct: 242 FHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDF 301
Query: 182 PEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
++ F M R G+ PD F+F L C L++G +H + N V +
Sbjct: 302 FDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVES 361
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +Y K +GE+++ F + K+ +SW+ + D++ + +F++M +
Sbjct: 362 SLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKME-----K 416
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D + F +IL CAGLA+V+ GK++H IR +DV V +ALV++YAKCG I + +
Sbjct: 417 VDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTI 476
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F++M RN+++WN++I A + G AL++F QM GIKPD ++FIG+L AC+H GLV
Sbjct: 477 FDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLV 536
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG YF SM K YGI IEH++C++DLLGRAG L EAE + D + LL
Sbjct: 537 DEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLG 596
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC + I ER+AK++ L+P YVLL+N+Y + G W D R+++KD G+ K
Sbjct: 597 ACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKM 656
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKI-GEINYM 571
P S IE + + +F +S + GE N++
Sbjct: 657 PGKSWIETKNNLG--SSFDFENSLVPGESNFL 686
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 196/369 (53%), Gaps = 8/369 (2%)
Query: 102 IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS-SDALLVYGE 160
++AS + C + + G QIHA+ +K G FVGNSL+++Y K+G + V+
Sbjct: 120 LYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDG 179
Query: 161 AFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKG 220
F +++S+ ++I+G+V +P E+F ML G+ P+ F+ + ++ CS DL+ G
Sbjct: 180 LFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLG 239
Query: 221 MILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHC 280
I H + + +SN + + ++ ++ + + +A + F + E D I W + I+A +
Sbjct: 240 RIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRN 299
Query: 281 ADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV 340
+++ L F M DHG+ PD FTF ++L AC L ++ GK++HA +I +V V
Sbjct: 300 DFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVV 359
Query: 341 GNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGI 400
++LV+MY KCG + S ++F+ M +N VSW+ ++ + + S +++F +M+
Sbjct: 360 ESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKME---- 415
Query: 401 KPDSVTFIGLLTACNHAGLVKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
K D F +L C V++G E + + K G D+ + L+DL + G + A
Sbjct: 416 KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRK--GGWRDVIVESALVDLYAKCGCIEYA 473
Query: 460 EEYTKKFPL 468
+ + P+
Sbjct: 474 QTIFDQMPV 482
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 194/386 (50%), Gaps = 17/386 (4%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++S+++ CS+ L+ G H VL G + ++++ +++++ + + AR++FD
Sbjct: 220 AFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFD 279
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLV 117
E+ E + + W+++IS + AL FF M + P+ + F + ++AC + L
Sbjct: 280 ELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLK 339
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+G+++HA + G+ V +SL+ MY K G ++ ++ N VS++AL+ G+
Sbjct: 340 QGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYC 399
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+N + ++F+ M + D + F L C+ +R+G +HC ++ +
Sbjct: 400 QNGDFKSVIQIFRKMEKV----DLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVI 455
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V + ++ LY+K I A+ F + ++LI+WN+ I + E+ L +F +M +
Sbjct: 456 VESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKE- 514
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG----NALVNMYAKCGL 353
G++PD +F IL AC+ V G++ + I M + + VG + +V++ + GL
Sbjct: 515 GIKPDYISFIGILFACSHRGLVDEGRE---YFISMTKDYGIKVGIEHYSCMVDLLGRAGL 571
Query: 354 ISCSYKLFNEMLHRNVVS-WNTIIAA 378
+ + L R+ S W ++ A
Sbjct: 572 LEEAEILIETSDFRDDSSLWAALLGA 597
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 175/346 (50%), Gaps = 25/346 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++L C L+QG +HA V+ G +V+V + ++++Y KCG + ++++FD M
Sbjct: 324 TFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRM 383
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
+N VSWSA++ G+ Q G+ ++ F +M + + Y F + + CAG+ ++ +G+++H
Sbjct: 384 PIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKV-DLYCFGTILRTCAGLAAVRQGKEVH 442
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
++ G V ++L+ +Y K G A ++ + NL+++N++I GF +N + E
Sbjct: 443 CQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGE 502
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ +F M+++G+ PD SF G L CS +G++ + + + I
Sbjct: 503 EALRIFNQMVKEGIKPDYISFIGILFACS-----HRGLVDEGREYFISMTKDYGIKVGIE 557
Query: 244 ALYSKFNLIGEA---EKAFRLIEEKDLIS----WNTFIAACSHCADYEKGLSVFKEMSND 296
+L+G A E+A LIE D W + AC+ C +YE + K +
Sbjct: 558 HYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVME- 616
Query: 297 HGVRPDDFTFASILAACAGLASVQH--GKQIHAHLIRMRLNQDVGV 340
+ P D+ + +L LA+V G+ A IR RL +D GV
Sbjct: 617 --LEP-DYHLSYVL-----LANVYKAVGRWNDALRIR-RLMKDRGV 653
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 97/177 (54%), Gaps = 3/177 (1%)
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL-ISCSYKLFNEM 364
+AS+L C + + HG QIHAH+I+ L D VGN+L+ +Y K G + K+F+ +
Sbjct: 121 YASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGL 180
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
++V+SW ++I+ + ++L+LF +M A G++P++ T ++ AC+ G +K G
Sbjct: 181 FVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGR 240
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
F+ + G + + LID+ GR L +A + + L D I +++SA
Sbjct: 241 I-FHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDEL-LEPDAICWTSIISA 295
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 200/581 (34%), Positives = 316/581 (54%), Gaps = 4/581 (0%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ +++SL+ CS L +G LHA K+G + + +LNLYAKC + A F
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVK 118
E N+V W+ M+ + + + F QM + +PN+Y + S + C + L
Sbjct: 449 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL 508
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+QIH+ +K + ++V + LI MY K+G A + ++VS+ +IAG+ +
Sbjct: 509 GEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ 568
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+K F+ ML +G+ D + C+ L++G +H S+
Sbjct: 569 YNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPF 628
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N ++ LYS+ I E+ AF E D I+WN ++ + E+ L VF M N G
Sbjct: 629 QNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRM-NREG 687
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ ++FTF S + A + A+++ GKQ+HA + + + + V NAL++MYAKCG IS +
Sbjct: 688 IDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAE 747
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
K F E+ +N VSWN II A++ H G AL F+QM + ++P+ VT +G+L+AC+H G
Sbjct: 748 KQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIG 807
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV +G AYF SM YG+SP EH+ C++D+L RAG L A+E+ ++ P+ D +V TL
Sbjct: 808 LVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTL 867
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
LSAC + +++ IGE A L L+P ++ YVLLSNLYA W R+ +K+ G+K
Sbjct: 868 LSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVK 927
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSLAA 579
KEP S IEV+ + F V + +H EI+ + L+ A
Sbjct: 928 KEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRA 968
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/439 (31%), Positives = 228/439 (51%), Gaps = 5/439 (1%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+HA +L G++ +V N +++LY++ G + LAR+VFD + ++ SW AMISG +
Sbjct: 209 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 268
Query: 84 HLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
A+ F M++L P Y F+S +SAC I+SL G+Q+H LK G++S ++V N+
Sbjct: 269 EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 328
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
L+S+Y +G A ++ + + V++N LI G + EK E+FK M GL PD
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+ A + CS L +G LH T K SN + ++ LY+K I A F
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
E ++++ WN + A D +F++M + V P+ +T+ SIL C L ++
Sbjct: 449 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV-PNQYTYPSILKTCIRLGDLE 507
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G+QIH+ +I+ + V + L++MYAK G + ++ + ++VVSW T+IA +
Sbjct: 508 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
+ AL F QM GI+ D V ++AC +KEG+ ++ G S D+
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDL 626
Query: 441 EHFTCLIDLLGRAGKLLEA 459
L+ L R GK+ E+
Sbjct: 627 PFQNALVTLYSRCGKIEES 645
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 144/488 (29%), Positives = 246/488 (50%), Gaps = 16/488 (3%)
Query: 3 KSISSLLHHCSKTK-ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+++ LL C KT +L +G LH+ +LK+G+ + +S + + Y G + A KVFD
Sbjct: 85 QTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFD 144
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEF--FSQM---HLLPNEYIFASAISAC-AGIQS 115
EM ER + +W+ MI A +L+ F F +M ++ PNE F+ + AC G +
Sbjct: 145 EMPERTIFTWNKMIK--ELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVA 202
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
+QIHA L G + V N LI +Y + G+ A V+ + S+ A+I+G
Sbjct: 203 FDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISG 262
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+N+ + +F M G++P ++F+ L C L G LH L +K S+
Sbjct: 263 LSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD 322
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
+V N +++LY + AE F + ++D +++NT I S C EK + +FK M
Sbjct: 323 TYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHL 382
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
D G+ PD T AS++ AC+ ++ G+Q+HA+ ++ + + AL+N+YAKC I
Sbjct: 383 D-GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIE 441
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ F E NVV WN ++ A+ ++ ++F QM+ I P+ T+ +L C
Sbjct: 442 TALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCI 501
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTC--LIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
G ++ GE + + KT + + + C LID+ + GKL A + +F G+D +
Sbjct: 502 RLGDLELGEQIHSQIIKT---NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA-GKDVV 557
Query: 474 VLGTLLSA 481
T+++
Sbjct: 558 SWTTMIAG 565
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 204/545 (37%), Positives = 308/545 (56%), Gaps = 7/545 (1%)
Query: 35 PDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM 94
P V+ + + + + K G + AR +FDEM ER++V+W+ MI+G+ H A F +M
Sbjct: 42 PSVLATTLIKSYFGK-GLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEM 100
Query: 95 ---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
L PN + +S + AC G++ L G+ +H ++K G +V N+L+ MY S
Sbjct: 101 MNEELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVS 160
Query: 152 -SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
DA +V+ N VS+ LIAG+ G VF+ ML + + + FSF+ +
Sbjct: 161 MDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRA 220
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
C+ G LH K ESN V N+I+ +Y + + EA + F + ++DLI+W
Sbjct: 221 CTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITW 280
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
NT IA ++ + L VF M ++ G P+ FTF SI+AACA LA + G+QIH +I
Sbjct: 281 NTLIAGYER-SNPTESLYVFSMMESE-GFSPNCFTFTSIMAACATLAFLNCGQQIHGRII 338
Query: 331 RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALK 390
R L+ ++ + NAL++MY+KCG I+ S+++F M R++VSW ++ + H G A++
Sbjct: 339 RRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVE 398
Query: 391 LFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLL 450
LF++M +GI+PD V F+ +L+AC+HAGLV EG YF M Y ISPD E + C++DLL
Sbjct: 399 LFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLL 458
Query: 451 GRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYV 510
GRAGK+ EA E + P D V G L AC+ +G+ A ++ L+P YV
Sbjct: 459 GRAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYV 518
Query: 511 LLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINY 570
+LSN+YA+DG WG+ A RK++K G KKE S +EV F V + SKI I
Sbjct: 519 MLSNIYAADGKWGEFARLRKLMKRMGNKKETGRSWVEVGNHVYSFVVGDEVGSKIEGIYQ 578
Query: 571 MLKTL 575
+L+ L
Sbjct: 579 VLENL 583
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 142/281 (50%), Gaps = 10/281 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S S + C+ + G LHAAV K G + ++ V N +L++Y +C A + F EM
Sbjct: 213 SFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEM 272
Query: 64 SERNLVSWSAMISGHHQAG--EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQ 121
++R+L++W+ +I+G+ ++ E L PN + F S ++ACA + L GQQ
Sbjct: 273 NQRDLITWNTLIAGYERSNPTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQ 332
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
IH ++ G + N+LI MY K G +D+ V+G +LVS+ A++ G+ +
Sbjct: 333 IHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGY 392
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV-KCKLESNPFVGN 240
E+ E+F M+R G+ PDR F L CS + + +G+ L V + + +
Sbjct: 393 GEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYG 452
Query: 241 TIMALYSKFNLIGEAEKAFRLIE----EKDLISWNTFIAAC 277
++ L + G+ E+A+ LIE + D W F+ AC
Sbjct: 453 CVVDLLGR---AGKVEEAYELIESMPFKPDECVWGPFLGAC 490
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 199/616 (32%), Positives = 320/616 (51%), Gaps = 67/616 (10%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C +T+ Q LH ++K P+ + N+++N Y+K G + AR VFD+M + N SW
Sbjct: 15 CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74
Query: 72 SAMISGHHQAGEHLLALEFFSQM---------HLLPNEYIFASAISACAGIQSLVK---- 118
+ M+S + ++G+ E FS M L+ + S + A S++K
Sbjct: 75 NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134
Query: 119 ----------------------GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALL 156
G+QIH +KFG+ + FVG+SL+ MY K+G S A
Sbjct: 135 NLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQ 194
Query: 157 VYGEAFEPNLVSFNALIAGF-------------------------------VENQQPEKG 185
V+ E E N+V +N +I G ++N +
Sbjct: 195 VFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEA 254
Query: 186 FEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMAL 245
++F+ M ++G+ D+++F L C L++G +H L ++ N FVG+ ++ +
Sbjct: 255 MDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDM 314
Query: 246 YSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFT 305
Y K + AE F+ + K+++SW + E+ + VF +M + G+ PDDFT
Sbjct: 315 YCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRN-GIEPDDFT 373
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
S++++CA LAS++ G Q H + L + V NAL+ +Y KCG I S +LF+EM
Sbjct: 374 LGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMS 433
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
R+ VSW +++ +A + LFE+M G+KPD+VTFI +L+AC+ AGLV+ G+
Sbjct: 434 FRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQ 493
Query: 426 YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLR 485
YF SM K +GI P +H+TC+IDL GRAG+L EA+ + K P D I TLLS+CRL
Sbjct: 494 YFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLY 553
Query: 486 RDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSM 545
+ IG+ A+ L L P + Y+LLS++YA+ G W +VA R+ +++ G +KEP +S
Sbjct: 554 GNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSW 613
Query: 546 IEVQGTFEKFTVAEFS 561
I+ + F+ + S
Sbjct: 614 IKYKSKVYIFSADDQS 629
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 203/429 (47%), Gaps = 50/429 (11%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S++L S + G +H ++K G V V + ++++YAK G + +A +VFDE+
Sbjct: 140 TFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEV 199
Query: 64 SERNLV-------------------------------SWSAMISGHHQAGEHLLALEFFS 92
ERN+V SW+ MI+G Q G A++ F
Sbjct: 200 QERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFR 259
Query: 93 QMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
M + ++Y F S ++AC G+++L +G++IH ++ GY FVG++L+ MY K
Sbjct: 260 DMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCR 319
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
A V+ N+VS+ A++ G+ +N E+ VF M R G+ PD F+ +
Sbjct: 320 SVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVIS 379
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
C+ L +G HC + L S V N ++ LY K I ++ + F + +D +S
Sbjct: 380 SCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVS 439
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
W ++ + + + +F+ M G++PD TF ++L+AC+ V+ G+Q +
Sbjct: 440 WTALVSGYAQFGKANETIDLFERMLV-QGLKPDAVTFIAVLSACSRAGLVERGQQYFESM 498
Query: 330 IRMRLNQDVGV------GNALVNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAA---H 379
++ D G+ +++++ + G + + N+M + + W T++++ +
Sbjct: 499 LK-----DHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLY 553
Query: 380 ANHRLGGSA 388
N +G A
Sbjct: 554 GNEEIGKWA 562
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 191/528 (36%), Positives = 313/528 (59%), Gaps = 8/528 (1%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAG 112
A KVFD+M ERNLV+W+ MI+ Q G A++ F M L +P+ + ++S +SAC
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKV---GYSSDALLVYGEAFEPNLVSF 169
+ L G+Q+H+ ++ G A VG SL+ MY K G D+ V+ + E N++S+
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 170 NALIAGFVENQQPEK-GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV 228
A+I + ++ + +K E+F M+ + P+ FSF+ L+ C +D G ++ V
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188
Query: 229 KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLS 288
K + S VGN+++++Y++ + +A KAF ++ EK+L+S+N + + E+
Sbjct: 189 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 248
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMY 348
+F E++ D G+ FTFAS+L+ A + ++ G+QIH L++ + + NAL++MY
Sbjct: 249 LFNEIA-DTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMY 307
Query: 349 AKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
++CG I ++++FNEM RNV+SW ++I A H AL++F +M TG KP+ +T++
Sbjct: 308 SRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYV 367
Query: 409 GLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
+L+AC+H G++ EG+ +FNSM K +GI P +EH+ C++DLLGR+G L+EA E+ PL
Sbjct: 368 AVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 427
Query: 469 GQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGA 528
D +V TLL ACR+ + +G A+ + +P + Y+LLSNL+AS G W DV
Sbjct: 428 MADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKI 487
Query: 529 RKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
RK +K+ L KE S IEV+ +F V E SH + +I L L+
Sbjct: 488 RKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLA 535
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/404 (30%), Positives = 225/404 (55%), Gaps = 21/404 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKC---GKMILARKVF 60
+ SS+L C++ L G LH+ V+++G+ DV V ++++YAKC G + +RKVF
Sbjct: 58 TYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVF 117
Query: 61 DEMSERNLVSWSAMISGHHQAGE-HLLALEFFSQM---HLLPNEYIFASAISACAGIQSL 116
++M E N++SW+A+I+ + Q+GE A+E F +M H+ PN + F+S + AC +
Sbjct: 118 EQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDP 177
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G+Q+++Y++K G AS++ VGNSLISMY + G DA + FE NLVS+NA++ G+
Sbjct: 178 YTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGY 237
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
+N + E+ F +F + G+ F+FA L + + KG +H +K +SN
Sbjct: 238 AKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ 297
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
+ N ++++YS+ I A + F +E++++ISW + I + + L +F +M +
Sbjct: 298 CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKML-E 356
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQ-----IHAHLIRMRLNQDVGVGNALVNMYAKC 351
G +P++ T+ ++L+AC+ + + G++ H I R+ +V++ +
Sbjct: 357 TGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYA----CMVDLLGRS 412
Query: 352 GLISCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSALKL 391
GL+ + + N M L + + W T++ A H N LG A ++
Sbjct: 413 GLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEM 456
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +SLL + A+ +G +H +LK G + + + N ++++Y++CG + A +VF+
Sbjct: 262 AFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFN 321
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
EM +RN++SW++MI+G + G ALE F +M PNE + + +SAC+ + + +
Sbjct: 322 EMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISE 381
Query: 119 GQQ 121
GQ+
Sbjct: 382 GQK 384
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 200/581 (34%), Positives = 316/581 (54%), Gaps = 4/581 (0%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ +++SL+ CS L +G LHA K+G + + +LNLYAKC + A F
Sbjct: 349 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 408
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVK 118
E N+V W+ M+ + + + F QM + +PN+Y + S + C + L
Sbjct: 409 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL 468
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+QIH+ +K + ++V + LI MY K+G A + ++VS+ +IAG+ +
Sbjct: 469 GEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ 528
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+K F+ ML +G+ D + C+ L++G +H S+
Sbjct: 529 YNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPF 588
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N ++ LYS+ I E+ AF E D I+WN ++ + E+ L VF M N G
Sbjct: 589 QNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRM-NREG 647
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ ++FTF S + A + A+++ GKQ+HA + + + + V NAL++MYAKCG IS +
Sbjct: 648 IDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAE 707
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
K F E+ +N VSWN II A++ H G AL F+QM + ++P+ VT +G+L+AC+H G
Sbjct: 708 KQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIG 767
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV +G AYF SM YG+SP EH+ C++D+L RAG L A+E+ ++ P+ D +V TL
Sbjct: 768 LVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTL 827
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
LSAC + +++ IGE A L L+P ++ YVLLSNLYA W R+ +K+ G+K
Sbjct: 828 LSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVK 887
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSLAA 579
KEP S IEV+ + F V + +H EI+ + L+ A
Sbjct: 888 KEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRA 928
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/439 (31%), Positives = 228/439 (51%), Gaps = 5/439 (1%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+HA +L G++ +V N +++LY++ G + LAR+VFD + ++ SW AMISG +
Sbjct: 169 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 228
Query: 84 HLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
A+ F M++L P Y F+S +SAC I+SL G+Q+H LK G++S ++V N+
Sbjct: 229 EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 288
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
L+S+Y +G A ++ + + V++N LI G + EK E+FK M GL PD
Sbjct: 289 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 348
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+ A + CS L +G LH T K SN + ++ LY+K I A F
Sbjct: 349 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 408
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
E ++++ WN + A D +F++M + V P+ +T+ SIL C L ++
Sbjct: 409 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV-PNQYTYPSILKTCIRLGDLE 467
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G+QIH+ +I+ + V + L++MYAK G + ++ + ++VVSW T+IA +
Sbjct: 468 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 527
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
+ AL F QM GI+ D V ++AC +KEG+ ++ G S D+
Sbjct: 528 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDL 586
Query: 441 EHFTCLIDLLGRAGKLLEA 459
L+ L R GK+ E+
Sbjct: 587 PFQNALVTLYSRCGKIEES 605
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 144/488 (29%), Positives = 246/488 (50%), Gaps = 16/488 (3%)
Query: 3 KSISSLLHHCSKTK-ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+++ LL C KT +L +G LH+ +LK+G+ + +S + + Y G + A KVFD
Sbjct: 45 QTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFD 104
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEF--FSQM---HLLPNEYIFASAISAC-AGIQS 115
EM ER + +W+ MI A +L+ F F +M ++ PNE F+ + AC G +
Sbjct: 105 EMPERTIFTWNKMIK--ELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVA 162
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
+QIHA L G + V N LI +Y + G+ A V+ + S+ A+I+G
Sbjct: 163 FDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISG 222
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+N+ + +F M G++P ++F+ L C L G LH L +K S+
Sbjct: 223 LSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD 282
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
+V N +++LY + AE F + ++D +++NT I S C EK + +FK M
Sbjct: 283 TYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHL 342
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
D G+ PD T AS++ AC+ ++ G+Q+HA+ ++ + + AL+N+YAKC I
Sbjct: 343 D-GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIE 401
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ F E NVV WN ++ A+ ++ ++F QM+ I P+ T+ +L C
Sbjct: 402 TALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCI 461
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTC--LIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
G ++ GE + + KT + + + C LID+ + GKL A + +F G+D +
Sbjct: 462 RLGDLELGEQIHSQIIKT---NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA-GKDVV 517
Query: 474 VLGTLLSA 481
T+++
Sbjct: 518 SWTTMIAG 525
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 198/563 (35%), Positives = 311/563 (55%), Gaps = 4/563 (0%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L G +H VLK+G + DV ++ ++ Y++ G + LA +FD M R++ +W+AMISG
Sbjct: 155 LDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISG 214
Query: 78 HHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
+ G+ ALE F +M + +S + C + ++ G IH Y++K G
Sbjct: 215 FYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFD 274
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
FV N+LI+MY K G A ++ + ++VS+N+L+A F +N++P V+ M
Sbjct: 275 LFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHS 334
Query: 195 QGLLPDRFSFAGGLEICS-VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
G++PD + + + + N L I +T +C + +GN I+ +Y+K I
Sbjct: 335 IGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFID 394
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
A K F + KD+ISWN+ I S + + V+ M G P+ T+ SIL A
Sbjct: 395 SARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAH 454
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
+ L +++ G + H LI+ L D+ V LV+MY KCG ++ + LF E+ H++ VSWN
Sbjct: 455 SQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWN 514
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT 433
II+ H H G A+KLF++M++ G+KPD +TF+ LL+AC+H+GLV EG+ F M++T
Sbjct: 515 AIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQET 574
Query: 434 YGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGER 493
YGI P ++H+ C++DL GRAG L +A + K P+ D V G LL ACR+ +V +
Sbjct: 575 YGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRT 634
Query: 494 LAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFE 553
++ L ++ YVLLSN+YA G W V R + +D GLKK P +S IEV +
Sbjct: 635 VSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKID 694
Query: 554 KFTVAEFSHSKIGEINYMLKTLS 576
F +H K EI L+ L+
Sbjct: 695 VFYTGNQTHPKCEEIYSELRNLT 717
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 239/455 (52%), Gaps = 14/455 (3%)
Query: 11 HCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVS 70
+C+K +Q LHA ++ G + +S ++N YA G + AR FD++ +++ +
Sbjct: 52 YCTKVHLAKQ---LHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYT 108
Query: 71 WSAMISGHHQAGEHLLAL----EFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYS 126
W++MIS + + G A+ EF S L + Y F I AC + G+++H
Sbjct: 109 WNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD---GRKVHCLV 165
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
LK G+ ++ S I Y + G+ S A ++ ++ ++NA+I+GF N + +
Sbjct: 166 LKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEAL 225
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
EVF M + + D + + L IC +D+ G+++H +K LE + FV N ++ +Y
Sbjct: 226 EVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMY 285
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
+KF + AE F ++ +D++SWN+ +AA L V+ +M + GV PD T
Sbjct: 286 AKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKM-HSIGVVPDLLTL 344
Query: 307 ASILAACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
S+ + A L + + IH + R D+ +GNA+++MYAK G I + K+F +
Sbjct: 345 VSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLP 404
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMK-ATGIKPDSVTFIGLLTACNHAGLVKEGE 424
++V+SWN++I ++ + L A+ ++ M+ +G P+ T++ +LTA + G +K+G
Sbjct: 405 VKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGM 464
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+ K + + DI TCL+D+ G+ GKL +A
Sbjct: 465 KAHGQLIKNF-LYFDIFVSTCLVDMYGKCGKLADA 498
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 199/387 (51%), Gaps = 18/387 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ISSLL C + + G+ +H +K+G++ D+ V N ++N+YAK G++ A +F++M
Sbjct: 242 TISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQM 301
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
R++VSW+++++ Q + ++AL +++MH ++P+ S S A + + + +
Sbjct: 302 KVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSR 361
Query: 121 QIHAY-SLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
IH + + + + +GN++I MY K+G+ A V+ +++S+N+LI G+ +N
Sbjct: 362 SIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQN 421
Query: 180 QQPEKGFEVFKLM-LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ +V+ M G +P++ ++ L S L++GM H +K L + FV
Sbjct: 422 GLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFV 481
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYE-KGLSVFKEMSNDH 297
++ +Y K + +A F + + +SWN I +C Y K + +FKEM ++
Sbjct: 482 STCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAII-SCHGLHGYGLKAVKLFKEMQSE- 539
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQI-----HAHLIRMRLNQDVGVGNALVNMYAKCG 352
GV+PD TF S+L+AC+ V G+ + IR L +V+++ + G
Sbjct: 540 GVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKH----YGCMVDLFGRAG 595
Query: 353 LISCSYKLFNEMLHRNVVS-WNTIIAA 378
+ ++ M R VS W ++ A
Sbjct: 596 HLEKAFNFVKNMPVRPDVSVWGALLGA 622
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 207/637 (32%), Positives = 333/637 (52%), Gaps = 92/637 (14%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+ LL C ++++ + +HA +L ++ + N ++++Y KC + ARK+FD M +
Sbjct: 19 AKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQ 78
Query: 66 RNL-------------------------------VSWSAMISGHHQAGEHLLALEFFSQM 94
RN SW++M+SG Q +LE+F +M
Sbjct: 79 RNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKM 138
Query: 95 H---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
H L NEY F SA+SACAG+ L G Q+HA K Y++ ++G++LI MY K G
Sbjct: 139 HREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSV 198
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
+ A V+ E NLV++N+LI + +N + EVF M+ GL PD + A + C
Sbjct: 199 ACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSAC 258
Query: 212 SVSNDLRKGMILHCLTVKC-KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIE------- 263
+ L++G+ +H VK K + +GN ++ +Y+K + + EA + F +
Sbjct: 259 ASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSE 318
Query: 264 ------------------------EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+++++SWN IA + + E+ L +F+ + + +
Sbjct: 319 TSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRE-SI 377
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
P +TF ++L + D+ VGN+L++MY KCG I +
Sbjct: 378 WPTHYTFGNLLKS------------------------DIFVGNSLIDMYMKCGSIEDGSR 413
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F +M R+ VSWN II +A + G AL++F +M G KPD VT IG+L AC+HAGL
Sbjct: 414 VFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGL 473
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V+EG YF SME+ +G+ P +H+TC++DLLGRAG L EA+ + P+ D +V G+LL
Sbjct: 474 VEEGRHYFFSMEE-HGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLL 532
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
+AC++ ++ +G+ A++L + P + PYVLLSN+YA G WGDV RK+++ G+ K
Sbjct: 533 AACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTK 592
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
+P S IEV+ F V + SH +I +LK L+
Sbjct: 593 QPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLT 629
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 180/380 (47%), Gaps = 64/380 (16%)
Query: 97 LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMY----------- 145
LPN FA + +C +S + +HA L ++ F+ N LI +Y
Sbjct: 12 LPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARK 71
Query: 146 --------------------MKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKG 185
K G+ +A ++G EP+ S+N++++GF ++ + E+
Sbjct: 72 LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 186 FEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMAL 245
E F M R+ L + +SF L C+ DL G +H L K + ++ ++G+ ++ +
Sbjct: 132 LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDM 191
Query: 246 YSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFT 305
YSK + AE+ F + E++L++WN+ I + L VF M D G+ PD+ T
Sbjct: 192 YSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMM-DSGLEPDEVT 250
Query: 306 FASILAACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKCGLISCSYKLFN-- 362
AS+++ACA L +++ G QIHA +++ + D+ +GNALV+MYAKC ++ + ++F+
Sbjct: 251 LASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRM 310
Query: 363 -----------------------------EMLHRNVVSWNTIIAAHANHRLGGSALKLFE 393
+M RNVVSWN +IA + + AL+LF
Sbjct: 311 SIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFR 370
Query: 394 QMKATGIKPDSVTFIGLLTA 413
+K I P TF LL +
Sbjct: 371 LLKRESIWPTHYTFGNLLKS 390
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 204/430 (47%), Gaps = 65/430 (15%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S S L C+ L G +HA V K DV + + ++++Y+KCG + A +VF M
Sbjct: 149 SFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGM 208
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
ERNLV+W+++I+ + Q G ALE F +M L P+E AS +SACA + +L +G
Sbjct: 209 IERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGL 268
Query: 121 QIHAYSLKFGYASISFV-GNSLISMYMKV--------------------------GYS-- 151
QIHA +K V GN+L+ MY K GY+
Sbjct: 269 QIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARA 328
Query: 152 ---SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGL 208
A ++ + + N+VS+NALIAG+ +N + E+ +F+L+ R+ + P ++F G L
Sbjct: 329 ASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTF-GNL 387
Query: 209 EICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLI 268
L+S+ FVGN+++ +Y K I + + F ++E+D +
Sbjct: 388 -----------------------LKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCV 424
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
SWN I + + L +F++M G +PD T +L AC+ V+ G+
Sbjct: 425 SWNAIIVGYAQNGYGAEALQIFRKMLV-CGEKPDHVTMIGVLCACSHAGLVEEGRHYFFS 483
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAA---HANHRL 384
+ L +V++ + G ++ + L M ++ + V W +++AA H N +
Sbjct: 484 MEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEM 543
Query: 385 GG-SALKLFE 393
G +A KL E
Sbjct: 544 GKHAAEKLLE 553
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 152/301 (50%), Gaps = 32/301 (10%)
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
++R LP+ FA L+ C S R ++H + + F+ N ++ +Y K +
Sbjct: 6 LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACS-------------------HCA----------- 281
+ +A K F + +++ +WN+ I+ + C+
Sbjct: 66 LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQH 125
Query: 282 -DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV 340
+E+ L F +M + + ++++F S L+ACAGL + G Q+HA + + R + DV +
Sbjct: 126 DRFEESLEYFVKMHREDFLL-NEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYM 184
Query: 341 GNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGI 400
G+AL++MY+KCG ++C+ ++F+ M+ RN+V+WN++I + + AL++F +M +G+
Sbjct: 185 GSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGL 244
Query: 401 KPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
+PD VT +++AC +KEG + KT D+ L+D+ + K+ EA
Sbjct: 245 EPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEAR 304
Query: 461 E 461
Sbjct: 305 R 305
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 197/583 (33%), Positives = 318/583 (54%), Gaps = 40/583 (6%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
SL +K G + DV+V + +LN Y + G + LA F+ M ERN SW+ MI+ Q G
Sbjct: 382 SLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCG 441
Query: 83 EHLLALEFFSQMHLLPNEYIFASA--ISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
A++ + + +P + + ++A A + + K + I L + N+
Sbjct: 442 RLDDAIQLYER---VPEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVA----WNA 494
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
+I+ Y + G +A ++ + N S+ A+IAGFV+N++ + E+ + R G +P
Sbjct: 495 IIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPS 554
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
SF L C+ D+ G ++H L +K + N +V N ++++Y+K + + FR
Sbjct: 555 DSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFR 614
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND------------------------ 296
I KD +SWN+ I+ S + VF++M
Sbjct: 615 TIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDL 674
Query: 297 ------HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
G++P+ T S+L+AC L +++ G+Q HA + ++ + + VGN+L+ MY K
Sbjct: 675 FLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFK 734
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGL 410
CG + +F EM ++++WN ++ A + LG A+K+FEQM+ GI PD ++F+G+
Sbjct: 735 CGYED-GFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGV 793
Query: 411 LTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQ 470
L AC+HAGLV EG A+FNSM + YGI P + H+TC++DLLGRAG L EAE + P+
Sbjct: 794 LCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKP 853
Query: 471 DPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARK 530
D ++ LL ACR+ R+V +G+R+A++LF + ++ YVLLSNL+AS GMW VA RK
Sbjct: 854 DSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRK 913
Query: 531 MLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLK 573
++KD GL KEP S I+V+ F + +H +I EI LK
Sbjct: 914 LMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALK 956
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 168/349 (48%), Gaps = 37/349 (10%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGK----------- 52
S +S L C+ ++ G +H+ +K G Q + V N ++++YAKCG
Sbjct: 557 SFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTI 616
Query: 53 --------------------MILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFS 92
+ AR VF++M +R++VSW+A+IS + QAG +AL+ F
Sbjct: 617 RVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFL 676
Query: 93 QM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
M + PN+ S +SAC + ++ G+Q HA K G+ + FVGNSLI+MY K G
Sbjct: 677 DMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG 736
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
Y D V+ E E +L+++NA++ G +N ++ ++F+ M +G+LPD+ SF G L
Sbjct: 737 Y-EDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLC 795
Query: 210 ICSVSNDLRKGMI-LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK-DL 267
CS + + +G + +T K + + ++ L + + EAE + K D
Sbjct: 796 ACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDS 855
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
+ W + AC + E G V + + + + S L A G+
Sbjct: 856 VIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGM 904
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 175/381 (45%), Gaps = 45/381 (11%)
Query: 43 VLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYI 102
+L YAK G++ AR+VF+ M+ERN+VSW+AMISG+ Q G+ A + F +M P + +
Sbjct: 239 LLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEM---PEKNV 295
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
A S+V G H Y + S+A ++ +
Sbjct: 296 --------ASWNSVVTGY-CHCYRM------------------------SEARELFDQMP 322
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
E N VS+ +I+G+V + ++VF M R PD+ F L + +DL
Sbjct: 323 ERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGS 382
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
L + +K E + VG+ I+ Y++ + A F + E++ SW T IAA + C
Sbjct: 383 LRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGR 442
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
+ + +++ + T +++ A A + +Q + I + LN +V N
Sbjct: 443 LDDAIQLYERVPEQTVA-----TKTAMMTAYAQVGRIQKARLIFDEI----LNPNVVAWN 493
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
A++ Y + G++ + LF +M +N SW +IA + AL+L ++ +G P
Sbjct: 494 AIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVP 553
Query: 403 DSVTFIGLLTACNHAGLVKEG 423
+F L+AC + G V+ G
Sbjct: 554 SDSSFTSALSACANIGDVEIG 574
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 183/421 (43%), Gaps = 85/421 (20%)
Query: 48 AKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAI 107
+ G++ AR+VF+EM +R++VSW++MI+G+ Q G+ + LL + ++
Sbjct: 182 GRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGK-------VDEARLLFDAFV----- 229
Query: 108 SACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLV 167
G+ I +++ L++ Y K G +A V+ E N+V
Sbjct: 230 -----------GKNIRTWTI-------------LLTGYAKEGRIEEAREVFESMTERNVV 265
Query: 168 SFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLT 227
S+NA+I+G+V+N + ++F M
Sbjct: 266 SWNAMISGYVQNGDLKNARKLFDEM----------------------------------- 290
Query: 228 VKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGL 287
E N N+++ Y + EA + F + E++ +SW I+ H +DY +
Sbjct: 291 ----PEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAW 346
Query: 288 SVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNM 347
VF +M RPD F +L+A GL ++ + I+ DV VG+A++N
Sbjct: 347 DVFVKMCRTVA-RPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNA 405
Query: 348 YAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTF 407
Y + G + + F M RN SW T+IAA A A++L+E++ + T
Sbjct: 406 YTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTV----ATK 461
Query: 408 IGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
++TA G +++ F+ + ++P++ + +I + G L EA++ +K P
Sbjct: 462 TAMMTAYAQVGRIQKARLIFDEI-----LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMP 516
Query: 468 L 468
+
Sbjct: 517 V 517
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
N + + G + + ++FNEM+ R+VVSWN++I ++ + A LF+ I+
Sbjct: 175 NTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR 234
Query: 402 PDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
T+ LLT G ++E F SM + +S
Sbjct: 235 ----TWTILLTGYAKEGRIEEAREVFESMTERNVVS 266
>gi|356495756|ref|XP_003516739.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71420-like [Glycine max]
Length = 782
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 213/589 (36%), Positives = 326/589 (55%), Gaps = 31/589 (5%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMG--IQPDVIVSNHVLNLYAKCGKMILARKVF 60
++ +SL H C++ K LQ G++LH VL IQ DV ++NH++N+Y KCG + AR VF
Sbjct: 91 QTYASLFHACAQKKCLQHGMTLHHYVLHKDPTIQNDVFLTNHIINMYCKCGHLAYARYVF 150
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM--HLLPNEYIFASAISACAGIQSLVK 118
D+MS RN+VSW+A+ISGH Q+G FS + H PNE+ FAS +SAC +
Sbjct: 151 DQMSHRNIVSWTALISGHAQSGLVRECFSLFSGLLAHFRPNEFAFASLLSACEE-HDIKC 209
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKV-----GYS---SDALLVYGEAFEPNLVSFN 170
G Q+HA +LK + +V NSLI+MY K GY+ DA ++ NLVS+N
Sbjct: 210 GMQVHAVALKISLDANVYVANSLITMYSKRSGFGGGYAQTPDDAWTMFKSMEFRNLVSWN 269
Query: 171 ALIAGFVENQQPEKGFEVFKLMLRQGLLPDR---FSFAGGLEICS----VSNDLRKGMIL 223
++IA F +K +F M G+ DR S L C ++ LRK L
Sbjct: 270 SMIAXFQLRGLGDKAICLFAHMYCNGIGFDRATLLSVFSSLNECGAFDVINTYLRKCFQL 329
Query: 224 HCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK----DLISWNTFIAACSH 279
HCLT+K L S V ++ Y+ NL G +R+ + D++SW I+ +
Sbjct: 330 HCLTIKSGLISEIEVVTALIKSYA--NLGGHISDCYRIFHDTSSQLDIVSWTALISVFAE 387
Query: 280 CADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG 339
D E+ +F ++ + PD +TF+ L ACA + QH IH+ +I+ +D
Sbjct: 388 -RDPEQAFLLFCQL-HRQSYLPDWYTFSIALKACAYFVTEQHAMAIHSQVIKKGFQEDTV 445
Query: 340 VGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG 399
+ NAL++ YA+CG ++ S ++FNEM ++VSWN+++ ++A H AL+LF+QM
Sbjct: 446 LCNALMHAYARCGSLALSEQVFNEMGCHDLVSWNSMLKSYAIHGQAKDALELFQQMN--- 502
Query: 400 IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+ PDS TF+ LL+AC+H GLV EG FNSM +G+ P ++H++C++DL GRAGK+ EA
Sbjct: 503 VCPDSATFVALLSACSHVGLVDEGVKLFNSMSDDHGVVPQLDHYSCMVDLYGRAGKIFEA 562
Query: 460 EEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASD 519
EE +K P+ D ++ +LL +CR + + + A + L+P + YV +SN+Y+S
Sbjct: 563 EELIRKMPMKPDSVIWSSLLGSCRKHGETRLAKLAADKFKELEPNNSLGYVQMSNIYSSG 622
Query: 520 GMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
G + R + D ++KEP S +E+ +F H G I
Sbjct: 623 GSFTKAGLIRNEMSDFKVRKEPGLSWVEIGKQVHEFGSGGQYHPNRGAI 671
>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 776
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 196/588 (33%), Positives = 326/588 (55%), Gaps = 26/588 (4%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LLH C + L +LH ++K G D+ V+ ++N+Y +C AR++FD M ++N
Sbjct: 82 LLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPDKN 141
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHA 124
+V+W+A+I+GH E LALE F +M L P+ Y +SAC+ + + GQQ+H
Sbjct: 142 VVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHG 201
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP-E 183
YS+K+G +I+ +GNSL +Y K G L + + N++++ +I+ E++ +
Sbjct: 202 YSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDENYLD 261
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
G +F ML G++P+ F+ + +C D+ G + K E+N V N+ M
Sbjct: 262 LGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTM 321
Query: 244 ALYSKFNLIGEAEKAFRLIEEKD---LISWNTFIAACSHCADYEK-----------GLSV 289
LY + GE ++A RL EE D +I+WN I+ + D K L +
Sbjct: 322 YLYLR---KGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKL 378
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
F+++ ++PD FTF+SIL+ C+ + +++ G+QIHA+ I+ DV V +ALVNMY
Sbjct: 379 FRDLVRSE-LKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYN 437
Query: 350 KCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
KCG I C+ K F EM R V+W ++I+ ++ H A++LFE M +G +P+ +TF+
Sbjct: 438 KCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVS 497
Query: 410 LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLG 469
LL+AC++AGLV+E E YF+ M Y I P ++H+ C++D+ R G+L +A + K+
Sbjct: 498 LLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGFE 557
Query: 470 QDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGAR 529
+ + +L++ CR ++ + A +L L+P YVLL N+Y S G W DVA R
Sbjct: 558 PNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVLLLNMYISTGRWRDVARVR 617
Query: 530 KMLK--DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
K+ K D G+ ++ S+ I + F F + +H + E+ +L+ L
Sbjct: 618 KLAKHEDVGVLRDRSWIAIRDKVYF--FRADDMTHPQATELYQLLENL 663
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 199/392 (50%), Gaps = 17/392 (4%)
Query: 102 IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA 161
++ + C L + +H + +K G A+ FV SL+++YM+ S DA ++
Sbjct: 78 MYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGM 137
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
+ N+V++ ALI G N +P EVF ML G P ++ G L CS + + G
Sbjct: 138 PDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQ 197
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
+H ++K ++ +GN++ LY K + +AF+ +K++I+W T I++C+
Sbjct: 198 QVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDE 257
Query: 282 DY-EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV 340
+Y + GLS+F +M + GV P++FT S+++ C + GKQ+ A ++ ++ V
Sbjct: 258 NYLDLGLSLFLDML-EGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPV 316
Query: 341 GNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA------------HANHRLGGSA 388
N+ + +Y + G + +LF EM ++++WN +I+ HA R G A
Sbjct: 317 KNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSR-GFQA 375
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID 448
LKLF + + +KPD TF +L+ C+ +++GE + KT G D+ + L++
Sbjct: 376 LKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKT-GCLSDVVVNSALVN 434
Query: 449 LLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+ + G + A + + P + P+ +++S
Sbjct: 435 MYNKCGSIECATKAFVEMPT-RTPVTWTSMIS 465
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 208/427 (48%), Gaps = 23/427 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ +L CS + + G +H +K G + N + LY K G + + F
Sbjct: 179 TLGGMLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGT 238
Query: 64 SERNLVSWSAMISGHHQAGEHL-LALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
++N+++W+ MIS + +L L L F M ++PNE+ S +S C + G
Sbjct: 239 PDKNVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLG 298
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+ A+ K G + V NS + +Y++ G + +A+ ++ E +++++NA+I+G+ +
Sbjct: 299 KQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQI 358
Query: 180 QQPEK--------GFEVFKL---MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV 228
K GF+ KL ++R L PD F+F+ L +CS L +G +H T+
Sbjct: 359 MDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTI 418
Query: 229 KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLS 288
K S+ V + ++ +Y+K I A KAF + + ++W + I+ S + +
Sbjct: 419 KTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQ 478
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN--ALVN 346
+F++M G RP++ TF S+L+AC+ V+ ++ + ++R + + V + +V+
Sbjct: 479 LFEDMVLS-GARPNEITFVSLLSACSYAGLVEEAER-YFDMMRNEYHIEPLVDHYGCMVD 536
Query: 347 MYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV 405
M+ + G + ++ N W++++A +H G L + + +KP +
Sbjct: 537 MFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSH--GNMELAFYAADRLLELKPKVI 594
Query: 406 -TFIGLL 411
T++ LL
Sbjct: 595 ETYVLLL 601
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 116/253 (45%), Gaps = 10/253 (3%)
Query: 168 SFNALIAGFVENQQPEKGFEVFKLM--LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHC 225
S AL G +E++ P + + + M LR G + L C + L LH
Sbjct: 41 SAQALENGRLEHESPPRPLDAQEAMGMLRDGQTVQSAMYVPLLHRCVEAGGLGAARALHG 100
Query: 226 LTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEK 285
VK ++ FV +++ +Y + +A + F + +K++++W I + ++
Sbjct: 101 HMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPDKNVVTWTALITGHTLNSEPAL 160
Query: 286 GLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALV 345
L VF EM + G P +T +L+AC+ + G+Q+H + I+ + +GN+L
Sbjct: 161 ALEVFVEML-ELGRYPSHYTLGGMLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLC 219
Query: 346 NMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR----LGGSALKLFEQMKATGIK 401
+Y K G + + F +NV++W T+I++ A LG L LF M G+
Sbjct: 220 RLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDENYLDLG---LSLFLDMLEGGVM 276
Query: 402 PDSVTFIGLLTAC 414
P+ T +++ C
Sbjct: 277 PNEFTLTSVMSLC 289
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 201/567 (35%), Positives = 327/567 (57%), Gaps = 11/567 (1%)
Query: 19 QQGISLHAAVLKMGI-QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
++G +H ++ G+ V V N ++N+YAKCG + AR VF M +++ VSW++MI+G
Sbjct: 119 RKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITG 178
Query: 78 HHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
Q A++ ++ M L+P+ + SA+S+CA + ++ GQQ H +K G
Sbjct: 179 LDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMD 238
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN-QQPEKGFEVFKLML 193
V N+L+++Y + ++ V+ E + VS+N +I ++ + EVF M+
Sbjct: 239 VSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMM 298
Query: 194 RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
R G P+R +F L S + + +H L +K ++ + + N ++A Y K +
Sbjct: 299 RAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEME 358
Query: 254 EAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
E+ F R+ E +D +SWN+ I+ H K + + M G R D FTFA++L+A
Sbjct: 359 NCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQ-RGQRLDCFTFATVLSA 417
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
CA +A+++ G ++HA IR L DV +G+ALV+MY+KCG I + + FN M RN+ SW
Sbjct: 418 CATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSW 477
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
N++I+ +A H G +AL+LF +MK +G PD +TF+G+L+AC+H GLV EG YF SM +
Sbjct: 478 NSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTE 537
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLR---RDVV 489
YG+ P +EH++C++DLLGRAG+L + E + K P+ + ++ T+L AC R R
Sbjct: 538 VYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGAC-CRGNGRKTE 596
Query: 490 IGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQ 549
+G R A+ LF++ P YVLLSN+YAS G W D+A R+ ++++ +KKE S + ++
Sbjct: 597 LGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMK 656
Query: 550 GTFEKFTVAEFSHSKIGEINYMLKTLS 576
F + SH + G I LK L
Sbjct: 657 DGVHVFVAGDNSHPEKGLIYAKLKELD 683
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 141/455 (30%), Positives = 239/455 (52%), Gaps = 15/455 (3%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
H VLK G D+ + N ++N+Y + G + ARK+FDEM +RN V+W+ +ISG+ Q G
Sbjct: 22 FHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGM 81
Query: 84 HLLALEFFSQM---HLLPNEYIFASAISACAGIQSLV---KGQQIHAYSLKFGYASISF- 136
A +M LPN + F SAI AC +S++ KG+Q+H Y+++ G
Sbjct: 82 PEDACGVLKEMIFEGFLPNRFAFGSAIRACQ--ESMLWRRKGRQVHGYAIRTGLNDAKVA 139
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
VGN LI+MY K G A V+G + + VS+N++I G +N+ E + + M + G
Sbjct: 140 VGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTG 199
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
L+P F+ L C+ + G H +K L+ + V NT++ALY++ + + E +
Sbjct: 200 LMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQ 259
Query: 257 KAFRLIEEKDLISWNTFIAACSHC-ADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
K F + E+D +SWNT I A + A + + VF EM G P+ TF ++LA +
Sbjct: 260 KVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMR-AGWSPNRVTFINLLATVSS 318
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML-HRNVVSWNT 374
L++ + QIHA +++ + D + NAL+ Y K G + ++F+ M R+ VSWN+
Sbjct: 319 LSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNS 378
Query: 375 IIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG-EAYFNSMEKT 433
+I+ + ++ L A+ L M G + D TF +L+AC ++ G E + ++
Sbjct: 379 MISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRAC 438
Query: 434 YGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
+ D+ + L+D+ + G++ A + P+
Sbjct: 439 --LESDVVIGSALVDMYSKCGRIDYASRFFNLMPV 471
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 186/362 (51%), Gaps = 5/362 (1%)
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H LK G+ S F+ N+LI++Y+++G A ++ E + N V++ LI+G+ +N P
Sbjct: 23 HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDL-RKGMILHCLTVKCKL-ESNPFVGN 240
E V K M+ +G LP+RF+F + C S RKG +H ++ L ++ VGN
Sbjct: 83 EDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGN 142
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y+K I A F L+ +KD +SWN+ I +E + + M G+
Sbjct: 143 GLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKT-GLM 201
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P +F S L++CA L + G+Q H I++ L+ DV V N L+ +YA+ ++ K+
Sbjct: 202 PSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKV 261
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGS-ALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
F+ ML R+ VSWNT+I A A+ S A+++F +M G P+ VTFI LL +
Sbjct: 262 FSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLST 321
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
K +++ Y + D L+ G++G++ EE + +D + +++
Sbjct: 322 SKLSHQ-IHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMI 380
Query: 480 SA 481
S
Sbjct: 381 SG 382
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 189/379 (49%), Gaps = 8/379 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S L C+ + G H +K+G+ DV VSN +L LYA+ ++ +KVF M ER
Sbjct: 209 SALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLER 268
Query: 67 NLVSWSAMISGHHQAGEHLL-ALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
+ VSW+ +I +G + A+E F +M PN F + ++ + + + QI
Sbjct: 269 DQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQI 328
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE-PNLVSFNALIAGFVENQQ 181
HA LK+ + + N+L++ Y K G + ++ E + VS+N++I+G++ N+
Sbjct: 329 HALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNEL 388
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
K ++ LM+++G D F+FA L C+ L GM +H ++ LES+ +G+
Sbjct: 389 LCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSA 448
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +YSK I A + F L+ ++L SWN+ I+ + + L +F M G P
Sbjct: 449 LVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLS-GQLP 507
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCSYKL 360
D TF +L+AC+ + V G + + + L V + +V++ + G +
Sbjct: 508 DHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENF 567
Query: 361 FNEM-LHRNVVSWNTIIAA 378
N+M + N++ W T++ A
Sbjct: 568 INKMPIKPNILIWRTVLGA 586
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 73/119 (61%), Gaps = 3/119 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +++L C+ L+ G+ +HA ++ ++ DV++ + ++++Y+KCG++ A + F+ M
Sbjct: 410 TFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLM 469
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKG 119
RNL SW++MISG+ + G AL F++M L LP+ F +SAC+ I + +G
Sbjct: 470 PVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEG 528
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 204/571 (35%), Positives = 321/571 (56%), Gaps = 19/571 (3%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
++ C + AL G +H ++K+G DV V N ++++Y K G + LA KVFDEM R+
Sbjct: 130 VIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRD 189
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLLPNE---YIFASAISACAGIQSLVKGQQIHA 124
LVSW++M+SG+ G+ L +L F +M L N+ + SA+ AC+ L G +IH
Sbjct: 190 LVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHC 249
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
++ V SLI MY K G A V+ + N+V++NA+I G E+ +
Sbjct: 250 QVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQEDDK--- 306
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
++PD + L CS S L +G +H ++ + ++
Sbjct: 307 ------------VIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVD 354
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y K + AE F + EK+++SWNT +AA Y++ L +F+ + N+ ++PD
Sbjct: 355 MYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNE-PLKPDAI 413
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T AS+L A A LAS GKQIH++++++ L + + NA+V MYAKCG + + + F+ M
Sbjct: 414 TIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGM 473
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+ ++VVSWNT+I A+A H G ++++ F +M+ G KP+ TF+ LLTAC+ +GL+ EG
Sbjct: 474 VCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGW 533
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRL 484
+FNSM+ YGI P IEH+ C++DLLGR G L EA+ + ++ PL + G+LL+A R
Sbjct: 534 GFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRN 593
Query: 485 RRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYS 544
DVV+ E A+ + L+ T YVLLSN+YA G W DV + ++K+ GL K S
Sbjct: 594 HNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCS 653
Query: 545 MIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
M+++ G E F + SH+ I +L L
Sbjct: 654 MVDINGRSESFINQDRSHAHTNLIYDVLDIL 684
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 210/419 (50%), Gaps = 20/419 (4%)
Query: 47 YAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIF 103
+ + G M A +F++M+ + W+ +I G+ G A++F+ +M + + + F
Sbjct: 68 FVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTF 127
Query: 104 ASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE 163
I AC + +L+ GQ++H +K G+ +V N LI MY+K+G+ A V+ E
Sbjct: 128 PFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPV 187
Query: 164 PNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMIL 223
+LVS+N++++G+ + FK MLR G DRF L CS+ + LR GM +
Sbjct: 188 RDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEI 247
Query: 224 HCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY 283
HC ++ +LE + V +++ +Y K + AE+ F I K++++WN I
Sbjct: 248 HCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGG------- 300
Query: 284 EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA 343
M D V PD T ++L +C+ ++ GK IH IR + + A
Sbjct: 301 ---------MQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETA 351
Query: 344 LVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPD 403
LV+MY KCG + + +FN+M +N+VSWNT++AA+ + ALK+F+ + +KPD
Sbjct: 352 LVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPD 411
Query: 404 SVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
++T +L A EG+ + + K G+ + ++ + + G L A E+
Sbjct: 412 AITIASVLPAVAELASRSEGKQIHSYIMKL-GLGSNTFISNAIVYMYAKCGDLQTAREF 469
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 192/379 (50%), Gaps = 17/379 (4%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S L CS L+ G+ +H V++ ++ D++V ++++Y KCGK+ A +VF+ + +
Sbjct: 230 SALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSK 289
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYS 126
N+V+W+AMI G + + ++P+ + + +C+ +L++G+ IH ++
Sbjct: 290 NIVAWNAMIGGMQEDDK------------VIPDVITMINLLPSCSQSGALLEGKSIHGFA 337
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
++ + + +L+ MY K G A V+ + E N+VS+N ++A +V+N+Q ++
Sbjct: 338 IRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEAL 397
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
++F+ +L + L PD + A L + +G +H +K L SN F+ N I+ +Y
Sbjct: 398 KMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMY 457
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
+K + A + F + KD++SWNT I A + + F EM G +P+ TF
Sbjct: 458 AKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRG-KGFKPNGSTF 516
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN--ALVNMYAKCGLISCSYKLFNEM 364
S+L AC+ + G + ++ D G+ + ++++ + G + + EM
Sbjct: 517 VSLLTACSISGLIDEGWGFFNSM-KVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEM 575
Query: 365 -LHRNVVSWNTIIAAHANH 382
L W +++AA NH
Sbjct: 576 PLVPTARIWGSLLAASRNH 594
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A +I+S+L ++ + +G +H+ ++K+G+ + +SN ++ +YAKCG + AR+ FD
Sbjct: 412 AITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFD 471
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
M +++VSW+ MI + G +++FFS+M PN F S ++AC+
Sbjct: 472 GMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACS 524
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 191/528 (36%), Positives = 313/528 (59%), Gaps = 8/528 (1%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAG 112
A KVFD+M ERNLV+W+ MI+ Q G A++ F M L +P+ + ++S +SAC
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKV---GYSSDALLVYGEAFEPNLVSF 169
+ L G+Q+H+ ++ G A VG SL+ MY K G D+ V+ + E N++S+
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 170 NALIAGFVENQQPEK-GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV 228
A+I + ++ + +K E+F M+ + P+ FSF+ L+ C +D G ++ V
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183
Query: 229 KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLS 288
K + S VGN+++++Y++ + +A KAF ++ EK+L+S+N + + E+
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 243
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMY 348
+F E++ D G+ FTFAS+L+ A + ++ G+QIH L++ + + NAL++MY
Sbjct: 244 LFNEIA-DTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMY 302
Query: 349 AKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
++CG I ++++FNEM RNV+SW ++I A H AL++F +M TG KP+ +T++
Sbjct: 303 SRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYV 362
Query: 409 GLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
+L+AC+H G++ EG+ +FNSM K +GI P +EH+ C++DLLGR+G L+EA E+ PL
Sbjct: 363 AVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 422
Query: 469 GQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGA 528
D +V TLL ACR+ + +G A+ + +P + Y+LLSNL+AS G W DV
Sbjct: 423 MADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKI 482
Query: 529 RKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
RK +K+ L KE S IEV+ +F V E SH + +I L L+
Sbjct: 483 RKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLA 530
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/404 (30%), Positives = 225/404 (55%), Gaps = 21/404 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKC---GKMILARKVF 60
+ SS+L C++ L G LH+ V+++G+ DV V ++++YAKC G + +RKVF
Sbjct: 53 TYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVF 112
Query: 61 DEMSERNLVSWSAMISGHHQAGE-HLLALEFFSQM---HLLPNEYIFASAISACAGIQSL 116
++M E N++SW+A+I+ + Q+GE A+E F +M H+ PN + F+S + AC +
Sbjct: 113 EQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDP 172
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G+Q+++Y++K G AS++ VGNSLISMY + G DA + FE NLVS+NA++ G+
Sbjct: 173 YTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGY 232
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
+N + E+ F +F + G+ F+FA L + + KG +H +K +SN
Sbjct: 233 AKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ 292
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
+ N ++++YS+ I A + F +E++++ISW + I + + L +F +M +
Sbjct: 293 CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKML-E 351
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQ-----IHAHLIRMRLNQDVGVGNALVNMYAKC 351
G +P++ T+ ++L+AC+ + + G++ H I R+ +V++ +
Sbjct: 352 TGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYA----CMVDLLGRS 407
Query: 352 GLISCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSALKL 391
GL+ + + N M L + + W T++ A H N LG A ++
Sbjct: 408 GLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEM 451
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +SLL + A+ +G +H +LK G + + + N ++++Y++CG + A +VF+
Sbjct: 257 AFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFN 316
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
EM +RN++SW++MI+G + G ALE F +M PNE + + +SAC+ + + +
Sbjct: 317 EMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISE 376
Query: 119 GQQ 121
GQ+
Sbjct: 377 GQK 379
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 193/573 (33%), Positives = 315/573 (54%), Gaps = 4/573 (0%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+S+ C+ L LHA +K D +V ++++YAK ++ AR+ F +
Sbjct: 241 ASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPN 300
Query: 66 RNLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQI 122
+ + +AM+ G + G E L +F ++ + + + SACA ++ ++G Q+
Sbjct: 301 HTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQV 360
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H ++K G+ V N+++ +Y K +A LV+ E + + VS+NA+IA +N+
Sbjct: 361 HCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECY 420
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E MLR G+ PD F++ L+ C+ L G ++H +K L + FV +T+
Sbjct: 421 EDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTV 480
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y K +I EA+K I ++L+SWN+ I+ S E+ F EM D GV+PD
Sbjct: 481 VDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEML-DIGVKPD 539
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
FT+A++L CA LA+++ GKQIH +I+ + D + + LV+MYAKCG + S +F
Sbjct: 540 HFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFE 599
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+ + VSWN +I +A H G AL++FE+M+ + P+ TF+ +L AC+H GL+ +
Sbjct: 600 KAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDD 659
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G YF M Y + P +EHF C++D+LGR+ EA ++ + PL D ++ TLLS C
Sbjct: 660 GCRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSIC 719
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
++R+DV + E A + L P +S Y+LLSN+YA G W DV+ R++++ LKKEP
Sbjct: 720 KIRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPG 779
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S IEVQ F + H + E+ ML L
Sbjct: 780 CSWIEVQSEMHGFLAGDKVHPRSREVYEMLNNL 812
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 139/459 (30%), Positives = 242/459 (52%), Gaps = 5/459 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++ LL C + L G+ +HA +K G++ DV + ++++Y KC + A + F M
Sbjct: 138 TLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGM 197
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQ 120
ERN VSW A I+G Q ++ LE F QM L ++ +AS +CA I L +
Sbjct: 198 GERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTAR 257
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HA+++K +++ VG +++ +Y K DA + + + NA++ G V
Sbjct: 258 QLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTG 317
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ ++F+ M R G+ D S +G C+ +G+ +HCL +K + + V N
Sbjct: 318 LGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRN 377
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
I+ LY K + EA F+ +E++D +SWN IAA YE ++ EM +G+
Sbjct: 378 AILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLR-YGME 436
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PDDFT+ S+L ACAGL S+++G +H I+ L D V + +V+MY KCG+I+ + KL
Sbjct: 437 PDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKL 496
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
+ + + +VSWN+II+ + ++ A K F +M G+KPD T+ +L C + +
Sbjct: 497 HDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATI 556
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+ G+ + K + + T L+D+ + G + ++
Sbjct: 557 ELGKQIHGQIIKQEMLGDEYISST-LVDMYAKCGNMPDS 594
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 140/504 (27%), Positives = 232/504 (46%), Gaps = 37/504 (7%)
Query: 17 ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMIS 76
AL G + HA +L G P VSN +L +YA+CG AR VFD M R+ VSW+ M++
Sbjct: 19 ALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTMLT 78
Query: 77 GHHQAGEHLLALEFFSQMH----------------------------------LLPNEYI 102
+ AG+ A F M + P+
Sbjct: 79 AYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTT 138
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
A + AC G++ L G QIHA ++K G G++L+ MY K DAL +
Sbjct: 139 LAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMG 198
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
E N VS+ A IAG V+N+Q +G E+F M R GL + ++A C+ L
Sbjct: 199 ERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQ 258
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
LH +K K ++ VG I+ +Y+K + + +A +AF + + + N +
Sbjct: 259 LHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGL 318
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
+ L +F+ M+ G+ D + + + +ACA + G Q+H I+ + DV V N
Sbjct: 319 GAEALQLFQFMTRS-GIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRN 377
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
A++++Y KC + +Y +F EM R+ VSWN IIAA + + +M G++P
Sbjct: 378 AILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEP 437
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
D T+ +L AC ++ G K+ G+ D + ++D+ + G + EA++
Sbjct: 438 DDFTYGSVLKACAGLQSLEYGSVVHGKAIKS-GLGLDAFVSSTVVDMYCKCGMITEAQKL 496
Query: 463 TKKFPLGQDPIVLGTLLSACRLRR 486
+ GQ+ + +++S L +
Sbjct: 497 HDRIG-GQELVSWNSIISGFSLNK 519
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 125/504 (24%), Positives = 224/504 (44%), Gaps = 57/504 (11%)
Query: 107 ISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV--------- 157
+ A AG +L GQ HA L G+ +FV N L+ MY + G ++ A V
Sbjct: 11 LCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDT 70
Query: 158 ----------------------YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
+G +P++VS+NAL++G+ + + M R+
Sbjct: 71 VSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARR 130
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
G+ PDR + A L+ C DL G+ +H + VK LE + G+ ++ +Y K + +A
Sbjct: 131 GVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDA 190
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
+ F + E++ +SW IA C Y +GL +F +M G+ +AS+ +CA
Sbjct: 191 LRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQR-LGLGVSQPAYASVFRSCAA 249
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
+ + +Q+HAH I+ + + D VG A+V++YAK + + + F + + V + N +
Sbjct: 250 ITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAM 309
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK--- 432
+ LG AL+LF+ M +GI D V+ G+ +AC E + Y ++
Sbjct: 310 MVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSAC------AEVKGYLQGLQVHCL 363
Query: 433 --TYGISPDIEHFTCLIDLLGRAGKLLEA----EEYTKKFPLGQDPIVLGTLLSACRLRR 486
G D+ ++DL G+ L+EA +E ++ + + I+ + C
Sbjct: 364 AIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDT 423
Query: 487 DVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGM----WGDVAGARKMLKDSGLKKEPS 542
+ E L + ++P + S L A G+ +G V + + GL S
Sbjct: 424 IAYLNEMLR---YGMEP---DDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVS 477
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIG 566
+++++ T A+ H +IG
Sbjct: 478 STVVDMYCKCGMITEAQKLHDRIG 501
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 7/149 (4%)
Query: 305 TFASILAACAGL--ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
TF+ + CAG +++ G+ HA ++ V N L+ MYA+CG + + +F+
Sbjct: 4 TFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD 63
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
M HR+ VSWNT++ A+A+ G+A LF M PD V++ LL+ G+ ++
Sbjct: 64 VMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMP----DPDVVSWNALLSGYCQRGMFRD 119
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLG 451
M + G++PD L+ G
Sbjct: 120 SVGLSVEMARR-GVAPDRTTLAVLLKACG 147
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 206/579 (35%), Positives = 325/579 (56%), Gaps = 8/579 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+L C+ K L G LH+ ++K ++ V N ++++YAK G + AR+ F+ +
Sbjct: 430 TYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELI 489
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
R+ VSW+ +I G+ Q + + A F +M+LL P+E AS +SACA ++ L +G+
Sbjct: 490 RNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGK 549
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H S+K G + + G+SLI MY K G A + E ++VS NALIAG+ +
Sbjct: 550 QVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQ-I 608
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE-SNPFVG 239
E+ +F+ ML +G+ +FA L+ C L G +H L +K L+ + F+G
Sbjct: 609 NLEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLG 668
Query: 240 NTIMALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
+++ +Y +A F K + W I+ S L ++KEM + +
Sbjct: 669 VSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCN- 727
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
V PD TF S L ACA ++S++ G + H+ + + D +ALV+MYAKCG + S
Sbjct: 728 VLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSM 787
Query: 359 KLFNEMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++F EM + +V+SWN++I A + AL++F++MK + + PD VTF+G+LTAC+H+
Sbjct: 788 QVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHS 847
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
G V EG F+ M YG+ P +H C++DLLGR G L EAEE+ K D V T
Sbjct: 848 GRVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWAT 907
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
+L ACR+ D + G++ A++L L+P +SPYVLLSN+YA+ G W +V R+ +++ G+
Sbjct: 908 MLGACRIHGDDIRGQQAAEKLIELEPQNSSPYVLLSNIYAASGNWDEVNTLRREMREKGV 967
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
KK P S I V F + SH EI+ +LK L+
Sbjct: 968 KKLPGCSWIVVGQETNMFVAGDKSHHSASEIDAILKDLT 1006
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 139/400 (34%), Positives = 217/400 (54%), Gaps = 5/400 (1%)
Query: 19 QQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGH 78
++ + + + K+G +PD + V+N Y G++ A +F M RN+V+W+ MISGH
Sbjct: 243 EEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGH 302
Query: 79 HQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS 135
+ G + A+EFF M + S +SA A + +L G +HA +LK G S
Sbjct: 303 AKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNV 362
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
+VG+SL+SMY K G A V+ E N+V +NA++ G+V+N + E+F M
Sbjct: 363 YVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSC 422
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
G PD F+++ L C+ L G LH + +K K SN FVGN ++ +Y+K + +A
Sbjct: 423 GFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDA 482
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
+ F LI +D +SWN I D + +F+ M N G+ PD+ + ASIL+ACA
Sbjct: 483 RQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRM-NLLGILPDEVSLASILSACAS 541
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
+ ++ GKQ+H ++ + G++L++MYAKCG I ++K+ M R+VVS N +
Sbjct: 542 VRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNAL 601
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
IA +A L A+ LF M GI +TF LL AC+
Sbjct: 602 IAGYAQINL-EQAVNLFRDMLVEGINSTEITFASLLDACH 640
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 226/441 (51%), Gaps = 40/441 (9%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+HA LK+G ++ N +++LYAKC + A + F ++ ++++++W++++S H + G
Sbjct: 81 IHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGF 140
Query: 84 HLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
L +++F + + PNE+ FA +S+CA ++ + G+Q+H +K G+ SIS+ +
Sbjct: 141 PHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGA 200
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
LI MY K + +DA ++ A E + VS+ ++I G+++ PE+ +VF+ M + G PD
Sbjct: 201 LIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPD 260
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+ +F T++ Y + A F
Sbjct: 261 QVAFV-----------------------------------TVINAYVDLGRLDNASDLFS 285
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ +++++WN I+ + + + F+ M G++ T S+L+A A LA++
Sbjct: 286 RMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRK-AGIKSTRSTLGSVLSAIASLAALD 344
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G +HA ++ L+ +V VG++LV+MYAKCG + + K+F+ + +NVV WN ++ +
Sbjct: 345 FGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYV 404
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
+ ++LF MK+ G PD T+ +L+AC + G + + K + ++
Sbjct: 405 QNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKN-KFASNL 463
Query: 441 EHFTCLIDLLGRAGKLLEAEE 461
L+D+ ++G L +A +
Sbjct: 464 FVGNALVDMYAKSGALEDARQ 484
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 140/263 (53%), Gaps = 9/263 (3%)
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
I+H ++K S +GN I+ LY+K + AE+AF+ +E+KD+++WN+ ++ S
Sbjct: 80 IIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQG 139
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
+ F + N GV P++FTFA +L++CA L V+ G+Q+H ++++M
Sbjct: 140 FPHLVVKYFGLLWNS-GVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCE 198
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
AL+ MYAKC ++ + +F+ + + VSW ++I + L A+K+F++M+ G +
Sbjct: 199 GALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQE 258
Query: 402 PDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
PD V F+ ++ A G + F+ M + ++ + +I + G +EA E
Sbjct: 259 PDQVAFVTVINAYVDLGRLDNASDLFSRMP-----NRNVVAWNLMISGHAKGGYGVEAIE 313
Query: 462 Y---TKKFPLGQDPIVLGTLLSA 481
+ +K + LG++LSA
Sbjct: 314 FFQNMRKAGIKSTRSTLGSVLSA 336
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 57/102 (55%)
Query: 323 KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH 382
K IHA +++ +GN +V++YAKC + + + F ++ +++++WN+I++ H+
Sbjct: 79 KIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQ 138
Query: 383 RLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+K F + +G+ P+ TF +L++C +VK G
Sbjct: 139 GFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGR 180
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 195/560 (34%), Positives = 312/560 (55%), Gaps = 5/560 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L C++ +Q GI +H +K+G+ DV V+N ++++Y+KCG + A+ +FD+
Sbjct: 136 TLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKN 195
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP----NEYIFASAISACAGIQSLVKG 119
+ +N VSW+ MI G G A F +M + NE + + AC I L
Sbjct: 196 NRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSL 255
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+++H YS++ G+ V N ++ Y K G A V+ + S+NALI G +N
Sbjct: 256 KELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQN 315
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
P K ++ M GL+PD F+ L + LR G +H ++ LE + F+G
Sbjct: 316 GDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIG 375
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++++LY A F +EEK +SWN I+ S E L +F+++ +D G
Sbjct: 376 ISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSD-GF 434
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+P D S+L AC+ ++++ GK+ H + ++ L +DV V + ++MYAK G I S
Sbjct: 435 QPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRS 494
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F+ + ++++ SWN IIAA+ H G +++LFE+M+ G PD TFIG+LT C+HAGL
Sbjct: 495 VFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGL 554
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V+EG YFN M+ +GI P +EH+ C++D+LGRAG+L +A + P D V +LL
Sbjct: 555 VEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLL 614
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
S CR ++ IG+ +A++L L+P YV LSNLYA G W DV R+M+KD GL+K
Sbjct: 615 SFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQK 674
Query: 540 EPSYSMIEVQGTFEKFTVAE 559
+ S IE+ G F +
Sbjct: 675 DAGCSWIELGGKVHSFVAGD 694
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 127/418 (30%), Positives = 222/418 (53%), Gaps = 9/418 (2%)
Query: 15 TKALQQGIS--LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWS 72
T +L +G+ +H V+KMG+ DV V N ++ +Y K G + A KVF M RNLVSW+
Sbjct: 42 TGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWN 101
Query: 73 AMISGHHQAGEHLLALEFFSQMH-----LLPNEYIFASAISACAGIQSLVKGQQIHAYSL 127
++ISG + G + +M LLP+ + + CA + G +IH ++
Sbjct: 102 SIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAV 161
Query: 128 KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE 187
K G + V NSL+ MY K GY ++A +++ + N VS+N +I G + F
Sbjct: 162 KLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFN 221
Query: 188 VFKLM-LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
+F+ M +++ + + + L C + LR LH +++ + + V N +A Y
Sbjct: 222 LFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAY 281
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
+K ++ AE+ F +E K + SWN I C+ D K L+++ +M+ G+ PD FT
Sbjct: 282 AKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYS-GLVPDWFTI 340
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
S+L A A L S+++GK++H ++R L D +G +L+++Y CG S + LF+ M
Sbjct: 341 GSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEE 400
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
++ VSWN +I+ ++ + L AL LF ++ + G +P + + +L AC+ ++ G+
Sbjct: 401 KSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGK 458
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 172/329 (52%), Gaps = 4/329 (1%)
Query: 99 NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY 158
+ + F I AC G G+ IH +K G FVGN+LI+MY K G+ A+ V+
Sbjct: 30 DNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVF 89
Query: 159 GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLML--RQGLLPDRFSFAGGLEICSVSND 216
NLVS+N++I+GF EN + F++ M+ +GLLPD + L +C+ D
Sbjct: 90 HYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVD 149
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
++ G+ +H L VK L + V N+++ +YSK + EA+ F K+ +SWNT I
Sbjct: 150 VQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGG 209
Query: 277 -CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN 335
C+ +E ++F+EM + ++ T +IL AC ++ ++ K++H + IR
Sbjct: 210 LCTKGYIFE-AFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQ 268
Query: 336 QDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM 395
D V N V YAKCG++ C+ ++F M + V SWN +I A + AL L+ QM
Sbjct: 269 YDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQM 328
Query: 396 KATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+G+ PD T LL A H ++ G+
Sbjct: 329 TYSGLVPDWFTIGSLLLASAHLKSLRYGK 357
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 3/180 (1%)
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
Y + +F ++ D D+FTF ++ AC G G+ IH +I+M L DV VGN
Sbjct: 11 YSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGN 70
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA--TGI 400
AL+ MY K G + + K+F+ M RN+VSWN+II+ + + + +M A G+
Sbjct: 71 ALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGL 130
Query: 401 KPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
PD T + +L C V+ G + + G+S D+ L+D+ + G L EA+
Sbjct: 131 LPDIATLVTVLPVCAREVDVQMG-IRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQ 189
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 190/569 (33%), Positives = 322/569 (56%), Gaps = 5/569 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ +++ C+ ++ G+ +H K+GI +V V+N ++++Y+KCG + AR +FD
Sbjct: 301 TMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMN 360
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKG 119
+N+VSW+ +I G+ + G+ E +M + NE + + AC+G L+
Sbjct: 361 GGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSL 420
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
++IH Y+ + G+ V N+ ++ Y K A V+ + S+NALI +N
Sbjct: 421 KEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQN 480
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
P K ++F +M+ G+ PDRF+ L C+ LR G +H ++ LE + F+G
Sbjct: 481 GFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIG 540
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++M+LY + + + + F +E K L+ WN I S + L F++M + G+
Sbjct: 541 ISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSG-GI 599
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+P + +L AC+ +++++ GK++H+ ++ L++D V AL++MYAKCG + S
Sbjct: 600 KPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQN 659
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F+ + ++ WN IIA + H G A++LFE M+ G +PDS TF+G+L ACNHAGL
Sbjct: 660 IFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGL 719
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V EG Y M+ YG+ P +EH+ C++D+LGRAG+L EA + + P D + +LL
Sbjct: 720 VTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLL 779
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
S+CR D+ IGE ++K+L L+P YVLLSNLYA G W +V R+ +K++GL K
Sbjct: 780 SSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHK 839
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
+ S IE+ G +F V++ S S+ +I
Sbjct: 840 DAGCSWIEIGGMVYRFLVSDGSLSESKKI 868
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 224/430 (52%), Gaps = 8/430 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAV-LKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
++I LL C K + G +HA V ++ DV++S ++ +Y+ CG +R VFD
Sbjct: 93 EAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFD 152
Query: 62 EMSERNLVSWSAMISGHHQAGEHL----LALEFFSQMHLLPNEYIFASAISACAGIQSLV 117
E++L ++A++SG+ + L LE S L P+ + ACAG+ +
Sbjct: 153 AAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVE 212
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+ +HA +LK G S +FVGN+LI+MY K G+ A+ V+ NLVS+N+++
Sbjct: 213 LGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACS 272
Query: 178 ENQQPEKGFEVFKLML---RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
EN + VFK +L +GL+PD + + C+ ++R GM++H L K +
Sbjct: 273 ENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITE 332
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
V N+++ +YSK +GEA F + K+++SWNT I S D+ + +EM
Sbjct: 333 EVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQ 392
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
+ VR ++ T ++L AC+G + K+IH + R +D V NA V YAKC +
Sbjct: 393 REEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSL 452
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
C+ ++F M + V SWN +I AHA + G +L LF M +G+ PD T LL AC
Sbjct: 453 DCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLAC 512
Query: 415 NHAGLVKEGE 424
++ G+
Sbjct: 513 ARLKFLRCGK 522
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 202/413 (48%), Gaps = 40/413 (9%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I SLL C++ K L+ G +H +L+ G++ D + +++LY +C M+L + +FD+M
Sbjct: 504 TIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKM 563
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
++LV W+ MI+G Q AL+ F QM + P E + AC+ + +L G+
Sbjct: 564 ENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGK 623
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H+++LK + +FV +LI MY K G + ++ E + +N +IAG+ +
Sbjct: 624 EVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHG 683
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS----VSNDLRK-GMILHCLTVKCKLESN 235
K E+F+LM +G PD F+F G L C+ V+ L+ G + + VK KLE
Sbjct: 684 HGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHY 743
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLI----EEKDLISWNTFIAACSHCADYEKGLSVFK 291
V + + G+ +A +L+ +E D W++ +++C + D E G V K
Sbjct: 744 ACVVDML-------GRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSK 796
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
++ + +++ S L AGL +++ + L++D G
Sbjct: 797 KLLELEPNKAENYVLLSNLY--AGLGKWDEVRKVRQRMKENGLHKDAG------------ 842
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDS 404
CS+ M++R +VS ++ + ++ + +KL +++ G KPD+
Sbjct: 843 ----CSWIEIGGMVYRFLVSDGSL---SESKKIQQTWIKLEKKISKIGYKPDT 888
>gi|255559826|ref|XP_002520932.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539898|gb|EEF41477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 757
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 200/574 (34%), Positives = 325/574 (56%), Gaps = 8/574 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
L+ C +A Q+G+ LH +++ G+ V N L +YA M AR +FDEM E++
Sbjct: 171 LVQACRSLRAKQEGLQLHGYLIQSGLWASWSVQNSFLCMYADV-DMDCARILFDEMPEKD 229
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIH 123
++SWSAMI G+ Q E + L+ F +M + P+ I S + ACA ++ G+ +H
Sbjct: 230 VISWSAMIGGYVQYLEDQIGLQIFQKMLSTSRITPDGVILVSVLKACANSVNITMGRLVH 289
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
++ G S FV NSLI MY K + A V+ E N VS+N+L++G + N++
Sbjct: 290 GLTICRGLDSDLFVKNSLIDMYSKCKDAGSAFEVFSEMPRRNNVSWNSLLSGLILNKKYS 349
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ + M +G+ D + L+IC +HC T++ ESN V N+++
Sbjct: 350 EALLLVYSMRTEGIEADEVTLVNCLQICKYFAHPYHCKAVHCATIRRGCESNEIVLNSLI 409
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
Y+K NLI A + F +D++ W+T IA +HC ++ ++VF++M+ V P+
Sbjct: 410 DAYAKCNLIELAWEVFSRTRRRDVVLWSTMIAGFAHCGKPDEAIAVFQKMNEGIEV-PNA 468
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T ++L AC+ A ++ H IR L +V VG A+V+MY+KCG I S K FN+
Sbjct: 469 VTIINLLQACSVSAELKRSMWAHGAAIRRGLAAEVAVGTAIVDMYSKCGEIEASRKAFNQ 528
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
+ +N+++W+T+IAA+ + L AL L QMK+ IKP+++T++ +LTAC+H GLV+ G
Sbjct: 529 IPQKNIITWSTMIAAYGMNGLAHEALALLAQMKSHEIKPNALTYLSVLTACSHGGLVEMG 588
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP--LGQDPIVLGTLLSA 481
+ F SM + +G+ P+ EH++C++D+L RAGKL +A E + P V G LLSA
Sbjct: 589 LSVFKSMIQDHGVDPEFEHYSCMVDMLSRAGKLDDAMELIRMMPETFRAGASVWGALLSA 648
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
CR R +GE+ Q+ L+P + Y+L S++YASDG+W + A + + ++ G++
Sbjct: 649 CRTYRSSTLGEKAVYQVLELEPLNLAGYLLASSMYASDGLWDNAARMKLLARERGVRAVA 708
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
YS++ V KF + S S+ G I++ML L
Sbjct: 709 GYSIVHVDSKAHKFVAGDKSCSQAGNIHHMLNQL 742
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/466 (27%), Positives = 236/466 (50%), Gaps = 8/466 (1%)
Query: 20 QGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHH 79
G LHA ++K + N +LN Y KCG++ A VFD M R+ VSW+ +I G
Sbjct: 82 DGKCLHACLIKTAFDSFTSIGNSILNFYIKCGELDTAVSVFDSMRSRDSVSWNVLIHGCL 141
Query: 80 QAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF 136
G + L F + PN + AC +++ +G Q+H Y ++ G +
Sbjct: 142 DYGALVEGLWQFINARVAGFEPNISTLVLLVQACRSLRAKQEGLQLHGYLIQSGLWASWS 201
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
V NS + MY V A +++ E E +++S++A+I G+V+ + + G ++F+ ML
Sbjct: 202 VQNSFLCMYADVDMDC-ARILFDEMPEKDVISWSAMIGGYVQYLEDQIGLQIFQKMLSTS 260
Query: 197 -LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
+ PD L+ C+ S ++ G ++H LT+ L+S+ FV N+++ +YSK G A
Sbjct: 261 RITPDGVILVSVLKACANSVNITMGRLVHGLTICRGLDSDLFVKNSLIDMYSKCKDAGSA 320
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
+ F + ++ +SWN+ ++ Y + L + M + G+ D+ T + L C
Sbjct: 321 FEVFSEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMRTE-GIEADEVTLVNCLQICKY 379
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
A H K +H IR + V N+L++ YAKC LI ++++F+ R+VV W+T+
Sbjct: 380 FAHPYHCKAVHCATIRRGCESNEIVLNSLIDAYAKCNLIELAWEVFSRTRRRDVVLWSTM 439
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYG 435
IA A+ A+ +F++M P++VT I LL AC+ + +K + + G
Sbjct: 440 IAGFAHCGKPDEAIAVFQKMNEGIEVPNAVTIINLLQACSVSAELKR-SMWAHGAAIRRG 498
Query: 436 ISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
++ ++ T ++D+ + G++ + + + P ++ I T+++A
Sbjct: 499 LAAEVAVGTAIVDMYSKCGEIEASRKAFNQIP-QKNIITWSTMIAA 543
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 165/322 (51%), Gaps = 2/322 (0%)
Query: 95 HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDA 154
H L + +F + AC+ + S + G+ +HA +K + S + +GNS+++ Y+K G A
Sbjct: 60 HHLLDVTLFPPVLKACSYL-SYIDGKCLHACLIKTAFDSFTSIGNSILNFYIKCGELDTA 118
Query: 155 LLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVS 214
+ V+ + VS+N LI G ++ +G F G P+ + ++ C
Sbjct: 119 VSVFDSMRSRDSVSWNVLIHGCLDYGALVEGLWQFINARVAGFEPNISTLVLLVQACRSL 178
Query: 215 NDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFI 274
++G+ LH ++ L ++ V N+ + +Y+ ++ A F + EKD+ISW+ I
Sbjct: 179 RAKQEGLQLHGYLIQSGLWASWSVQNSFLCMYADVDM-DCARILFDEMPEKDVISWSAMI 237
Query: 275 AACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRL 334
+ + GL +F++M + + PD S+L ACA ++ G+ +H I L
Sbjct: 238 GGYVQYLEDQIGLQIFQKMLSTSRITPDGVILVSVLKACANSVNITMGRLVHGLTICRGL 297
Query: 335 NQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQ 394
+ D+ V N+L++MY+KC ++++F+EM RN VSWN++++ ++ AL L
Sbjct: 298 DSDLFVKNSLIDMYSKCKDAGSAFEVFSEMPRRNNVSWNSLLSGLILNKKYSEALLLVYS 357
Query: 395 MKATGIKPDSVTFIGLLTACNH 416
M+ GI+ D VT + L C +
Sbjct: 358 MRTEGIEADEVTLVNCLQICKY 379
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 186/389 (47%), Gaps = 18/389 (4%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C+ + + G +H + G+ D+ V N ++++Y+KC A +VF EM R
Sbjct: 271 SVLKACANSVNITMGRLVHGLTICRGLDSDLFVKNSLIDMYSKCKDAGSAFEVFSEMPRR 330
Query: 67 NLVSWSAMISG---HHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
N VSW++++SG + + E LL + + +E + + C + +H
Sbjct: 331 NNVSWNSLLSGLILNKKYSEALLLVYSMRTEGIEADEVTLVNCLQICKYFAHPYHCKAVH 390
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+++ G S V NSLI Y K A V+ ++V ++ +IAGF +P+
Sbjct: 391 CATIRRGCESNEIVLNSLIDAYAKCNLIELAWEVFSRTRRRDVVLWSTMIAGFAHCGKPD 450
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ VF+ M +P+ + L+ CSVS +L++ M H ++ L + VG I+
Sbjct: 451 EAIAVFQKMNEGIEVPNAVTIINLLQACSVSAELKRSMWAHGAAIRRGLAAEVAVGTAIV 510
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+YSK I + KAF I +K++I+W+T IAA + L++ +M + H ++P+
Sbjct: 511 DMYSKCGEIEASRKAFNQIPQKNIITWSTMIAAYGMNGLAHEALALLAQMKS-HEIKPNA 569
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG------NALVNMYAKCGLISCS 357
T+ S+L AC+ V+ G + +I QD GV + +V+M ++ G + +
Sbjct: 570 LTYLSVLTACSHGGLVEMGLSVFKSMI-----QDHGVDPEFEHYSCMVDMLSRAGKLDDA 624
Query: 358 YKLFN---EMLHRNVVSWNTIIAAHANHR 383
+L E W +++A +R
Sbjct: 625 MELIRMMPETFRAGASVWGALLSACRTYR 653
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 5/174 (2%)
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP---DDFTFASI 309
A A R + L+SW I S + + +S + E++N G+ D F +
Sbjct: 13 ASASMAMRFLSTSRLLSWTLRIKELSSNEKWHEVISQYYEITN-AGISHHLLDVTLFPPV 71
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
L AC+ L+ + GK +HA LI+ + +GN+++N Y KCG + + +F+ M R+
Sbjct: 72 LKACSYLSYID-GKCLHACLIKTAFDSFTSIGNSILNFYIKCGELDTAVSVFDSMRSRDS 130
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
VSWN +I ++ L F + G +P+ T + L+ AC +EG
Sbjct: 131 VSWNVLIHGCLDYGALVEGLWQFINARVAGFEPNISTLVLLVQACRSLRAKQEG 184
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A +I +LL CS + L++ + H A ++ G+ +V V ++++Y+KCG++ +RK F+
Sbjct: 468 AVTIINLLQACSVSAELKRSMWAHGAAIRRGLAAEVAVGTAIVDMYSKCGEIEASRKAFN 527
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
++ ++N+++WS MI+ + G AL +QM + PN + S ++AC+
Sbjct: 528 QIPQKNIITWSTMIAAYGMNGLAHEALALLAQMKSHEIKPNALTYLSVLTACS 580
>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Brachypodium distachyon]
Length = 805
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 201/575 (34%), Positives = 321/575 (55%), Gaps = 47/575 (8%)
Query: 4 SISSLLHHCSK--------TKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMIL 55
++SS+L C++ +A + G +HA +++ G D V N ++++Y KC +M
Sbjct: 243 AVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDE 302
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAG 112
A KVFD + + VSW+ +I+G QAG + ALE + M PNE +++ +++C
Sbjct: 303 AVKVFDSLPNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIK 362
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
+ ++ + +M+ K+ P++ ++N L
Sbjct: 363 ARDVLSAR----------------------AMFDKIS-------------RPSVTTWNTL 387
Query: 173 IAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
++G+ + + + E+F+ M Q + PDR + A L CS L G +H +V+ L
Sbjct: 388 LSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLL 447
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
++ FV + ++ +YSK IG A F + E+D++ WN+ I+ + + E+ FK+
Sbjct: 448 HNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQ 507
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
M + G+ P + ++AS++ +CA L+SV G+QIHA +++ +Q+V VG+AL++MYAKCG
Sbjct: 508 MRGN-GMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYAKCG 566
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
+ + F+ M+ +N+V+WN +I +A + G A+ LFE M T +PD VTFI +LT
Sbjct: 567 NMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAVLT 626
Query: 413 ACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDP 472
C+H+GLV E A+FNSME TYGI+P EH+TCLID LGRAG+L+E E P DP
Sbjct: 627 GCSHSGLVDEAIAFFNSMESTYGITPLAEHYTCLIDGLGRAGRLVEVEALIDNMPCKDDP 686
Query: 473 IVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKML 532
IV LL+AC + + +GE AK LF L P SPYVLLSN+YAS G GD +G R ++
Sbjct: 687 IVWEVLLAACAVHHNAELGECAAKHLFRLDPKNPSPYVLLSNIYASLGRHGDASGVRALM 746
Query: 533 KDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGE 567
G+ K YS I+ + F VA+ + GE
Sbjct: 747 SSRGVVKGRGYSWIDHKDGVHAFMVADDLQTDGGE 781
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 220/470 (46%), Gaps = 48/470 (10%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++S+L C AL G H +K+G+ ++ V N +L +Y KCG + A ++FD M
Sbjct: 142 TLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGM 201
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM-------HLLPNEYIFASAISACAGIQSL 116
+ N VS++AM+ G QAG AL F++M + + S ACA +
Sbjct: 202 ASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDV 261
Query: 117 VK----GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
V+ GQ IHA ++ G+ S VGNSLI MY K +A+ V+ + VS+N L
Sbjct: 262 VRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNIL 321
Query: 173 IAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
I GF + K EV LM G P+ +++ L C + D
Sbjct: 322 ITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARD---------------- 365
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
+ A F I + +WNT ++ ++ + +F+
Sbjct: 366 -------------------VLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRR 406
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
M + + V+PD T A IL++C+ L + G Q+H+ +R L+ D+ V + LV+MY+KCG
Sbjct: 407 MQHQN-VQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCG 465
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
I + +FN M R+VV WN++I+ A H L A F+QM+ G+ P ++ ++
Sbjct: 466 QIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMIN 525
Query: 413 ACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
+C V +G + K G ++ + LID+ + G + +A +
Sbjct: 526 SCARLSSVPQGRQIHAQIVKD-GYDQNVYVGSALIDMYAKCGNMDDARVF 574
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 202/434 (46%), Gaps = 48/434 (11%)
Query: 34 QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG---HHQAGEHLLALEF 90
+P+ N L+ + G + AR + DEM +RN+VSW+ +I+ +AGE L E
Sbjct: 71 RPNAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEG 130
Query: 91 FSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGY 150
+ L+P + AS +SAC + +L G++ H ++K G FV N+L+ MY K G
Sbjct: 131 MLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGG 190
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
DA+ ++ PN VSF A++ G V+ + +F M R G+ D + + L
Sbjct: 191 VEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGS 250
Query: 211 CS--------VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLI 262
C+ V R G +H L V+ S+ VGN+++ +Y+K + EA K F +
Sbjct: 251 CAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSL 310
Query: 263 EEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG 322
+SWN I Y K L V M + G P++ T++++LA+C
Sbjct: 311 PNISTVSWNILITGFGQAGSYAKALEVLNLM-EESGSEPNEVTYSNMLASC--------- 360
Query: 323 KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH 382
I+ R DV A +F+++ +V +WNT+++ +
Sbjct: 361 -------IKAR---DVLSARA----------------MFDKISRPSVTTWNTLLSGYCQE 394
Query: 383 RLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEH 442
L ++LF +M+ ++PD T +L++C+ G++ G +S + + D+
Sbjct: 395 ELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLG-TQVHSASVRFLLHNDMFV 453
Query: 443 FTCLIDLLGRAGKL 456
+ L+D+ + G++
Sbjct: 454 ASGLVDMYSKCGQI 467
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 145/305 (47%), Gaps = 47/305 (15%)
Query: 253 GEAEKAFRLIEE---KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
G+ + A L++E ++++SWNT IAA + + L +++ M + G+ P FT AS+
Sbjct: 88 GDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLRE-GLVPTHFTLASV 146
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
L+AC +A++ G++ H +++ L++++ V NAL+ MY KCG + + +LF+ M N
Sbjct: 147 LSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNE 206
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN-------------- 415
VS+ ++ AL+LF +M +G++ D V +L +C
Sbjct: 207 VSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFR 266
Query: 416 -----HAGLVKEG------------EAYFNSME-----KTYGISPDIE--HFTCLIDLLG 451
HA +V++G + Y M+ K + P+I + LI G
Sbjct: 267 LGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFG 326
Query: 452 RAGKLLEAEEYTKKF-PLGQDP--IVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSP 508
+AG +A E G +P + +L++C RDV+ + ++ +P+ T+
Sbjct: 327 QAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFDKIS--RPSVTTW 384
Query: 509 YVLLS 513
LLS
Sbjct: 385 NTLLS 389
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 193/557 (34%), Positives = 309/557 (55%), Gaps = 5/557 (0%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+H VLK+G + V N ++ Y K G + A +FDE+SE ++VSW++MI+G G
Sbjct: 492 VHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGF 551
Query: 84 HLLALEFFSQMHLLPNEYIFASAIS---ACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
LE F QM +L E + +S A A I +L G+ +H + +K ++ N+
Sbjct: 552 SGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNT 611
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
L+ MY K G + A V+ + + +VS+ + IA +V +F M +G+ PD
Sbjct: 612 LLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPD 671
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
++ + C+ S+ L KG +H +K + SN V N ++ +Y+K + EA F
Sbjct: 672 IYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFS 731
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
I KD++SWNT I S + + L +F +M +PDD T A +L ACAGLA++
Sbjct: 732 KIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ--FKPDDITMACVLPACAGLAALD 789
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G++IH H++R D+ V ALV+MYAKCGL+ + LF+ + ++++SW +IA +
Sbjct: 790 KGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYG 849
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
H G A+ F +M+ GI+PD +F +L AC+H+GL+ EG +FNSM G+ P +
Sbjct: 850 MHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKL 909
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH 500
EH+ C++DLL R G L +A ++ + P+ D + G LLS CR+ DV + E++A+ +F
Sbjct: 910 EHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFE 969
Query: 501 LQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEF 560
L+P T YV+L+N+YA W +V RK ++ G K+ P S IEV G F F
Sbjct: 970 LEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNS 1029
Query: 561 SHSKIGEINYMLKTLSL 577
H + I+ +L+ L++
Sbjct: 1030 KHPQAKRIDVLLRKLTM 1046
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 139/461 (30%), Positives = 244/461 (52%), Gaps = 8/461 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S S+L C++ K+L+ G +H+ ++ GI D + ++ +Y CG ++ RK+FD++
Sbjct: 371 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKI 430
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+ W+ ++S + + G ++ F +M ++ N Y F + A + + + +
Sbjct: 431 MNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECK 490
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H Y LK G+ S + V NSLI+ Y K G A ++ E EP++VS+N++I G V N
Sbjct: 491 RVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNG 550
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
G E+F ML G+ D + L + +L G LH VK N
Sbjct: 551 FSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSN 610
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
T++ +YSK + A + F + + ++SW + IAA Y + +F EM + GVR
Sbjct: 611 TLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQS-KGVR 669
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD +T SI+ ACA +S+ G+ +H+++I+ + ++ V NAL+NMYAKCG + + +
Sbjct: 670 PDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLV 729
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC-NHAGL 419
F+++ +++VSWNT+I ++ + L AL+LF M+ KPD +T +L AC A L
Sbjct: 730 FSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAAL 788
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
K E + + + + Y D+ L+D+ + G L+ A+
Sbjct: 789 DKGREIHGHILRRGY--FSDLHVACALVDMYAKCGLLVLAQ 827
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 70/111 (63%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++ +L C+ AL +G +H +L+ G D+ V+ ++++YAKCG ++LA+ +FD +
Sbjct: 774 TMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMI 833
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACA 111
+++L+SW+ MI+G+ G A+ F++M + P+E F+ ++AC+
Sbjct: 834 PKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACS 884
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 203/606 (33%), Positives = 327/606 (53%), Gaps = 35/606 (5%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
L C+K++A GI +H ++KMG D+ V N +++ YA+CG++ ARKVFDEMSERN+
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
VSW++MI G+ + A++ F +M + PN ISACA ++ L G++++A
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ G + ++L+ MYMK A ++ E NL NA+ + +V +
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILH--------------C----- 225
VF LM+ G+ PDR S + CS ++ G H C
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 380
Query: 226 LTVKCKLESNPF------------VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTF 273
+ +KC + F N+I+A Y + + A + F + EK+++SWNT
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 274 IAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR 333
I+ + +E+ + VF M + GV D T SI +AC L ++ K I+ ++ +
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 334 LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFE 393
+ DV +G LV+M+++CG + +FN + +R+V +W I A A A++LF+
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 453
M G+KPD V F+G LTAC+H GLV++G+ F SM K +G+SP+ H+ C++DLLGRA
Sbjct: 561 DMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRA 620
Query: 454 GKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLS 513
G L EA + + P+ + ++ +LL+ACR++ +V + A+++ L P T YVLLS
Sbjct: 621 GLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLS 680
Query: 514 NLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLK 573
N+YAS G W D+A R +K+ GL+K P S I+++G +FT + SH ++ I ML
Sbjct: 681 NVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLD 740
Query: 574 TLSLAA 579
+S A
Sbjct: 741 EVSQRA 746
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 129/494 (26%), Positives = 223/494 (45%), Gaps = 47/494 (9%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCG---KMILARK 58
K+ S L +C L+ H ++ K G+ DV ++ + G + A++
Sbjct: 32 TKATPSSLKNCKTIDELKM---FHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKE 88
Query: 59 VFDEMSER--NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGI 113
VF E SE ++++I G+ +G A+ F +M + P++Y F +SACA
Sbjct: 89 VF-ENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKS 147
Query: 114 QSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALI 173
++ G QIH +K GYA FV NSL+ Y + G A V+ E E N+VS+ ++I
Sbjct: 148 RAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMI 207
Query: 174 AGFVENQQPEKGFEVFKLMLR-QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
G+ + ++F M+R + + P+ + + C+ DL G ++ +
Sbjct: 208 CGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI 267
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
E N + + ++ +Y K N I A++ F +L N + + L VF
Sbjct: 268 EVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNL 327
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC- 351
M D GVRPD + S +++C+ L ++ GK H +++R + NAL++MY KC
Sbjct: 328 MM-DSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCH 386
Query: 352 ------------------------------GLISCSYKLFNEMLHRNVVSWNTIIAAHAN 381
G + +++ F M +N+VSWNTII+
Sbjct: 387 RQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQ 446
Query: 382 HRLGGSALKLFEQMKAT-GIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
L A+++F M++ G+ D VT + + +AC H G + + + +EK GI D+
Sbjct: 447 GSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLDV 505
Query: 441 EHFTCLIDLLGRAG 454
T L+D+ R G
Sbjct: 506 RLGTTLVDMFSRCG 519
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 87/177 (49%), Gaps = 5/177 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+ C AL ++ + K GIQ DV + +++++++CG A +F+ +
Sbjct: 472 TMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ R++ +W+A I AG A+E F M L P+ F A++AC+ + +G+
Sbjct: 532 TNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGK 591
Query: 121 QIHAYSLKF-GYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIAG 175
+I LK G + ++ + + G +A+ L+ EPN V +N+L+A
Sbjct: 592 EIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAA 648
>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 770
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 199/588 (33%), Positives = 330/588 (56%), Gaps = 26/588 (4%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LLH C +T +L +LH ++K G D+ V+ ++N+Y +CG AR +FDEM E+N
Sbjct: 84 LLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKN 143
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHA 124
+V+W+A+I+G+ + +LALE F +M L P++Y +SAC ++ G+Q+H
Sbjct: 144 VVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHG 203
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ-PE 183
Y++K+G ASI+ +GNSL +Y K G + + + N++++ +I+ E++ E
Sbjct: 204 YTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTE 263
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
G +F ML+ ++P+ F+ + +C S D+ G + K +N V N+ M
Sbjct: 264 LGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTM 323
Query: 244 ALYSKFNLIGEAEKAFRLIEEKD---LISWNTFIAACSHCADYEK-----------GLSV 289
LY + GE E+A RL EE + +I+WN I+ + D K L +
Sbjct: 324 YLYLR---KGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKI 380
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
F+++ ++PD FTF+SIL+ C+ + +++ G+QIHA I+ DV V +ALVNMY
Sbjct: 381 FRDLVRS-AMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYN 439
Query: 350 KCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
KCG I + K F EM R +V+W ++I+ ++ H A++LFE M G KP+ +TF+
Sbjct: 440 KCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVS 499
Query: 410 LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLG 469
LL+AC++AGLV+E YF+ M+ Y I P ++H+ C+ID+ R G+L +A + K+
Sbjct: 500 LLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFE 559
Query: 470 QDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGAR 529
+ + +L++ CR ++ + A +L L+P YVLL N+Y S G W DVA R
Sbjct: 560 PNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVVETYVLLLNMYISTGRWRDVARVR 619
Query: 530 KMLK--DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
K+ K D G+ ++ S+ I + F F + SH + E+ +L+TL
Sbjct: 620 KLSKHEDLGILRDRSWITIRDKVYF--FKADDRSHPQSTELYQLLETL 665
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 193/378 (51%), Gaps = 19/378 (5%)
Query: 102 IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA 161
++ + C SL + +H + +K G FV SL+++YM+ G S DA ++ E
Sbjct: 80 MYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEM 139
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
E N+V++ ALI G+ N QP EVF ML+ G P ++ G L C S+++ G
Sbjct: 140 PEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGK 199
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
+H T+K S +GN++ LY+K + +AF+ I +K++I+W T I+AC+
Sbjct: 200 QVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDE 259
Query: 282 DY-EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV 340
+Y E GL++F +M V P++FT S+++ C + GKQ+ ++ ++ V
Sbjct: 260 NYTELGLNLFLDMLKGE-VMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPV 318
Query: 341 GNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA------------HANHRLGGSA 388
N+ + +Y + G + +LF EM +V++WN +I+ HA R G A
Sbjct: 319 KNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSR-GFQA 377
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID 448
LK+F + + +KPD TF +L+ C+ +++GE KT G D+ + L++
Sbjct: 378 LKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKT-GFLSDVVVNSALVN 436
Query: 449 LLGRAGKLLEAEEYTKKF 466
+ + G + E TK F
Sbjct: 437 MYNKCGCI---EYATKAF 451
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 203/426 (47%), Gaps = 21/426 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ +L C + + G +H +K G + N + LY K G + + F +
Sbjct: 181 TLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRI 240
Query: 64 SERNLVSWSAMISGHHQAGEHL-LALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
++N+++W+ MIS + + L L F M ++PNE+ S +S C + G
Sbjct: 241 PDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLG 300
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+ + K G A+ V NS + +Y++ G + +A+ ++ E + +++++NA+I+GF +
Sbjct: 301 KQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQI 360
Query: 180 QQPEK--------GFE---VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV 228
K GF+ +F+ ++R + PD F+F+ L +CS L +G +H T+
Sbjct: 361 MDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTI 420
Query: 229 KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLS 288
K S+ V + ++ +Y+K I A KAF + + L++W + I+ S +
Sbjct: 421 KTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQ 480
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI-RMRLNQDVGVGNALVNM 347
+F++M G +P++ TF S+L+AC+ V+ + + + + +++M
Sbjct: 481 LFEDMIL-AGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDM 539
Query: 348 YAKCGLISCSYKLFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV- 405
+ + G + +Y N W++++A +H G L + + +KP V
Sbjct: 540 FVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSH--GNMELAFYAADRLLELKPKVVE 597
Query: 406 TFIGLL 411
T++ LL
Sbjct: 598 TYVLLL 603
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 2/224 (0%)
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
ML++G + L C + L LH VK + FV +++ +Y +
Sbjct: 69 MLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGN 128
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+A F + EK++++W I + + L VF EM G P D+T +L+
Sbjct: 129 SQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLK-LGRYPSDYTLGGMLS 187
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
AC ++ GKQ+H + I+ +GN+L +Y K G + + F + +NV++
Sbjct: 188 ACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVIT 247
Query: 372 WNTIIAAHA-NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
W T+I+A A + L LF M + P+ T +++ C
Sbjct: 248 WTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLC 291
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 190/585 (32%), Positives = 330/585 (56%), Gaps = 20/585 (3%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LLH C +T +L ++H + K G D+ V+ ++N Y +C AR++FD M ERN
Sbjct: 84 LLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPERN 143
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHA 124
+V+W+A+++G+ + L LE F +M + P+ Y + ++AC + G+Q+H
Sbjct: 144 VVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHG 203
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ-PE 183
Y++K+G SI+ +GNSL S+Y K+G AL + E N++++ +I+ E+++ E
Sbjct: 204 YAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVE 263
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
G +F ML G++P+ F+ + +C DL G + + K E+N V N+ M
Sbjct: 264 LGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTM 323
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEK-----------GLSVFKE 292
LY + EA + F +E+ +I+WN I+ + D K L++F++
Sbjct: 324 YLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRD 383
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
+ ++PD FTF+SIL+ C+ + +++ G+QIHA I+ DV V +ALVNMY KCG
Sbjct: 384 LKRSV-MKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCG 442
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
I + K F EM R V+W ++I+ ++ H A++LFE+M+ G++P+ +TF+ LL+
Sbjct: 443 CIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLS 502
Query: 413 ACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDP 472
AC++AGLV+E E YF+ M+K Y I P ++H+ C+ID+ R G++ +A + K+ +
Sbjct: 503 ACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNE 562
Query: 473 IVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKML 532
+ +L++ CR ++ + A +L L+P Y+LL N+Y S W DVA RK++
Sbjct: 563 AIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLM 622
Query: 533 K--DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
K D G+ ++ S+ I+ + F F + +H + E+ +L+ L
Sbjct: 623 KQEDVGILRDRSWITIKDKVYF--FRANDRTHPQATELYQLLENL 665
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 192/378 (50%), Gaps = 14/378 (3%)
Query: 102 IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA 161
++ + C SL + +H + K G ++ FV SL++ YM+ + DA ++
Sbjct: 80 MYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGM 139
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
E N+V++ AL+ G+ N QP G EVF ML G P ++ L C S D+ G
Sbjct: 140 PERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGK 199
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
+H +K ES +GN++ +LY+K + A +AF I EK++I+W T I+AC+
Sbjct: 200 QVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDE 259
Query: 282 D-YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV 340
+ E G+S+F +M D GV P++FT S+++ C + GKQ+ A ++ ++ V
Sbjct: 260 ECVELGMSLFIDMLMD-GVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPV 318
Query: 341 GNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN-----------HRLGGSAL 389
N+ + +Y + G + +LF +M ++++WN +I+ +A G AL
Sbjct: 319 KNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQAL 378
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
+F +K + +KPD TF +L+ C+ +++GE K+ G D+ + L+++
Sbjct: 379 TIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKS-GFLSDVVVNSALVNM 437
Query: 450 LGRAGKLLEAEEYTKKFP 467
+ G + +A + + P
Sbjct: 438 YNKCGCIQDANKAFLEMP 455
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 214/426 (50%), Gaps = 21/426 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ + L+ C + + G +H +K G + + N + +LYAK G + A + F +
Sbjct: 181 TLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRI 240
Query: 64 SERNLVSWSAMISGHHQAGEHL-LALEFFSQMHL---LPNEYIFASAISACAGIQSLVKG 119
E+N+++W+ MIS + E + L + F M + +PNE+ S +S C L G
Sbjct: 241 PEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLG 300
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+ A+S K G + V NS + +Y++ G + +A+ ++ + + +++++NA+I+G+ +
Sbjct: 301 KQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQI 360
Query: 180 --------QQPEKGFE---VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV 228
Q +GF+ +F+ + R + PD F+F+ L +CS L +G +H T+
Sbjct: 361 MDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTI 420
Query: 229 KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLS 288
K S+ V + ++ +Y+K I +A KAF + + ++W + I+ S ++ +
Sbjct: 421 KSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQ 480
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNM 347
+F+EM GVRP++ TF S+L+AC+ V+ + + + + V +++M
Sbjct: 481 LFEEM-RLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDM 539
Query: 348 YAKCGLISCSYKLFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV- 405
+ + G + ++ N W++++A +H G L + K +KP +
Sbjct: 540 FVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSH--GNMELAFYAADKLLELKPKGIE 597
Query: 406 TFIGLL 411
T+I LL
Sbjct: 598 TYILLL 603
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 114/219 (52%), Gaps = 21/219 (9%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+L CS AL+QG +HA +K G DV+V++ ++N+Y KCG + A K F EM
Sbjct: 395 TFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEM 454
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
R V+W++MISG+ Q G+ A++ F +M L PNE F S +SAC+ LV+
Sbjct: 455 PTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACS-YAGLVEEA 513
Query: 121 QIHAYSLKFGYASISFVGN--SLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIAGFV 177
+ + +K Y V + +I M++++G DA + FEPN +++L+AG
Sbjct: 514 EHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCR 573
Query: 178 ENQQPE--------------KGFEVFKLMLRQGLLPDRF 202
+ E KG E + L+L + +R+
Sbjct: 574 SHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERW 612
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 180/579 (31%), Positives = 329/579 (56%), Gaps = 6/579 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L C+ + +++G+++H +K+G+ +++V+N ++++Y+KC + A+ +FD+
Sbjct: 206 TLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKN 265
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH-----LLPNEYIFASAISACAGIQSLVK 118
++N+VSW++MI G+ + + +M + +E+ + + C L
Sbjct: 266 DKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQS 325
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+++H YS + G S V N+ I+ Y + G + V+ + S+NAL+ G+ +
Sbjct: 326 LKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQ 385
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N P K +++ M GL PD F+ L CS L G +H ++ L +PF+
Sbjct: 386 NSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFI 445
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
G ++++LY A+ F +E + L+SWN IA S ++ +++F++M +D G
Sbjct: 446 GISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSD-G 504
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
++P + + AC+ L++++ GK++H ++ L +D+ V +++++MYAK G I S
Sbjct: 505 IQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQ 564
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
++F+ + ++V SWN IIA + H G AL+LFE+M G+KPD TF G+L AC+HAG
Sbjct: 565 RIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAG 624
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV++G YFN M + I P +EH+TC++D+LGRAG++ +A ++ P D + +L
Sbjct: 625 LVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSL 684
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
LS+CR+ ++ +GE++A +L L+P YVL+SNL+A G W DV R +KD GL+
Sbjct: 685 LSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQ 744
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
K+ S IEV G F + + ++ E+ + L +
Sbjct: 745 KDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEV 783
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 135/458 (29%), Positives = 242/458 (52%), Gaps = 9/458 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++ C+ L G +H KM + DV V N ++ +Y KCG + A KVF+ M
Sbjct: 103 TLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHM 162
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM-----HLLPNEYIFASAISACAGIQSLVK 118
ERNLVSW+++I G + G + F +M +P+ + + CAG + + K
Sbjct: 163 PERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEK 222
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G +H ++K G V NSLI MY K + S+A L++ + + N+VS+N++I G+
Sbjct: 223 GMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAR 282
Query: 179 NQQPEKGFEVFKLMLRQG--LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
+ + F + + M + + D F+ L +C ++L+ LH + + L+SN
Sbjct: 283 EEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNE 342
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
V N +A Y++ + +E+ F L++ K + SWN + + +D K L ++ +M+ D
Sbjct: 343 LVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMT-D 401
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
G+ PD FT S+L AC+ + S+ +G++IH +R L D +G +L+++Y CG
Sbjct: 402 SGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFA 461
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ LF+ M HR++VSWN +IA ++ + L A+ LF QM + GI+P + + + AC+
Sbjct: 462 AQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQ 521
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
++ G+ K + ++ DI + +ID+ + G
Sbjct: 522 LSALRLGKELHCFALKAH-LTEDIFVSSSIIDMYAKGG 558
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 132/425 (31%), Positives = 222/425 (52%), Gaps = 8/425 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAV-LKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
LL C + K ++ G LH V D +++ ++ +Y+ CG +R VFD++ +
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISACAGIQSLVKGQQI 122
NL W+A++S + + A+ FS++ + P+ + I ACAG+ L GQ I
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H + K S FVGN+LI+MY K G +A+ V+ E NLVS+N++I GF EN
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFL 183
Query: 183 EKGFEVFKLML--RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
++ F F+ ML + +PD + L +C+ D+ KGM +H L VK L V N
Sbjct: 184 QESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNN 243
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM-SNDHGV 299
+++ +YSK + EA+ F ++K+++SWN+ I + D + + ++M + D +
Sbjct: 244 SLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKM 303
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+ D+FT ++L C + +Q K++H + R L + V NA + Y +CG + S +
Sbjct: 304 KADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSER 363
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F+ M + V SWN ++ +A + AL L+ QM +G+ PD T LL AC+
Sbjct: 364 VFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKS 423
Query: 420 VKEGE 424
+ GE
Sbjct: 424 LHYGE 428
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 126/256 (49%), Gaps = 4/256 (1%)
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT-IMALYSKFNLIGEAEKAFRLIEEKD 266
L+ C D+ G LH + N FV NT I+ +YS ++ F + K+
Sbjct: 5 LQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKN 64
Query: 267 LISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
L WN ++A + +E +S+F E+ + +PD+FT ++ ACAGL + G+ IH
Sbjct: 65 LFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIH 124
Query: 327 AHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGG 386
+M L DV VGNAL+ MY KCGL+ + K+F M RN+VSWN+II + +
Sbjct: 125 GMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQ 184
Query: 387 SALKLFEQM--KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFT 444
+ F +M PD T + +L C +++G A + + G++ ++
Sbjct: 185 ESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMA-VHGLAVKLGLNEELMVNN 243
Query: 445 CLIDLLGRAGKLLEAE 460
LID+ + L EA+
Sbjct: 244 SLIDMYSKCRFLSEAQ 259
>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 190/545 (34%), Positives = 314/545 (57%), Gaps = 8/545 (1%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH 95
++I SN+++++Y KC + ++A KVFD M ERN+VSWSA++SGH G+ +L FS+M
Sbjct: 411 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 470
Query: 96 ---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSS 152
+ PNE+ F++ + AC + +L KG QIH + LK G+ + VGNSL+ MY K G +
Sbjct: 471 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 530
Query: 153 DALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL--LPDRFSFAGGLEI 210
+A V+ + +L+S+NA+IAGFV K + F +M + PD F+ L+
Sbjct: 531 EAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKA 590
Query: 211 CSVSNDLRKGMILHCLTVKCKLE--SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLI 268
CS + + G +H V+ S+ + +++ LY K + A KAF I+EK +I
Sbjct: 591 CSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMI 650
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
SW++ I + ++ + + +FK + + + D F +SI+ A A ++ GKQ+ A
Sbjct: 651 SWSSLILGYAQEGEFVEAMGLFKRL-QELNSQIDSFALSSIIGVFADFALLRQGKQMQAL 709
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
+++ + V N++V+MY KCGL+ + K F EM ++V+SW +I + H LG +
Sbjct: 710 AVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKS 769
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID 448
+++F +M I+PD V ++ +L+AC+H+G++KEGE F+ + +T+GI P +EH+ C++D
Sbjct: 770 VRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVD 829
Query: 449 LLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSP 508
LLGRAG+L EA+ P+ + + TLLS CR+ D+ +G+ + K L + +
Sbjct: 830 LLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPAN 889
Query: 509 YVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
YV++SNLY G W + AR++ GLKKE S +E++ F E SH I
Sbjct: 890 YVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVI 949
Query: 569 NYMLK 573
LK
Sbjct: 950 QETLK 954
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 208/406 (51%), Gaps = 13/406 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S+ L C AL++G+ +H LK+G + V V N ++++Y+KCG++ A KVF +
Sbjct: 480 TFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI 539
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL-----PNEYIFASAISACAGIQSLVK 118
+R+L+SW+AMI+G AG AL+ F M P+E+ S + AC+ +
Sbjct: 540 VDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYA 599
Query: 119 GQQIHAYSLKFGY--ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G+QIH + ++ G+ S + + SL+ +Y+K GY A + + E ++S+++LI G+
Sbjct: 600 GKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGY 659
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
+ + + +FK + D F+ + + + + LR+G + L VK
Sbjct: 660 AQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLET 719
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
V N+++ +Y K L+ EAEK F ++ KD+ISW I +K + +F EM
Sbjct: 720 SVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLR- 778
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLIS 355
H + PD+ + ++L+AC+ ++ G+++ + L+ + V +V++ + G +
Sbjct: 779 HNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLK 838
Query: 356 CSYKLFNEM-LHRNVVSWNTIIA---AHANHRLGGSALKLFEQMKA 397
+ L + M + NV W T+++ H + LG K+ ++ A
Sbjct: 839 EAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDA 884
>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
Length = 1084
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 199/576 (34%), Positives = 311/576 (53%), Gaps = 28/576 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ISSLL C+ LQ+G LH+ + K G+ D I+ +L+LY KCG + A +F+
Sbjct: 246 TISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLG 305
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+ N+V W+ ++ Q + + E F QM + PN++ + + C + G+
Sbjct: 306 NRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGE 365
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH+ S+K G+ S +V LI MY K G+ A V E ++VS+ ++IAG+V+++
Sbjct: 366 QIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHE 425
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ FK M + G+ PD A + C+ +R+G+ +H + + N
Sbjct: 426 YCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWN 485
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ LY++ I EA +F IE KD I+WN ++ + +E+ L VF M + GV+
Sbjct: 486 ALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRM-DQSGVK 544
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ FTF S L+A A LA ++ GKQIHA +I+ + + VGNAL+++Y KCG +
Sbjct: 545 HNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKME 604
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+EM RN VSWNTII + + H G AL F+QMK
Sbjct: 605 FSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQMK------------------------ 640
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
KEG +YF SM YGI P +H+ C+ID+ GRAG+L A+++ ++ P+ D +V TLLS
Sbjct: 641 KEGLSYFKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKFVEEMPIAADAMVWRTLLS 700
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC++ +++ +GE AK L L+P ++ YVLLSN YA G W + RKM++D G++KE
Sbjct: 701 ACKVHKNIEVGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMRDRGVRKE 760
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
P S IEV+ F V + H +I L ++
Sbjct: 761 PGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVIN 796
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 159/487 (32%), Positives = 274/487 (56%), Gaps = 18/487 (3%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+SS+L C+K + QG S+HA K G + V N ++ LY +CG LA +VF +M
Sbjct: 146 LSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMP 205
Query: 65 ERNLVSWSAMISGHHQA--GEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
R+ V+++ +ISGH Q GEH ALE F +M L P+ +S ++ACA + L KG
Sbjct: 206 HRDTVTFNTLISGHAQCAHGEH--ALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKG 263
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
Q+H+Y K G +S + SL+ +Y+K G AL+++ N+V +N ++ F +
Sbjct: 264 TQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQI 323
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
K FE+F M G+ P++F++ L C+ + ++ G +H L+VK ES+ +V
Sbjct: 324 NDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVS 383
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC---SHCADYEKGLSVFKEMSND 296
++ +YSK+ + +A + +++EKD++SW + IA +C D L+ FKEM
Sbjct: 384 GVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKD---ALAAFKEMQK- 439
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
G+ PD+ AS ++ CAG+ +++ G QIHA + + DV + NALVN+YA+CG I
Sbjct: 440 CGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIRE 499
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
++ F E+ H++ ++WN +++ A L ALK+F +M +G+K + TF+ L+A +
Sbjct: 500 AFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASAN 559
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE-EYTKKFPLGQDPIVL 475
+K+G+ + KT G S + E LI L G+ G +A+ E+++ ++ +
Sbjct: 560 LAEIKQGKQIHARVIKT-GHSFETEVGNALISLYGKCGSFEDAKMEFSEMSE--RNEVSW 616
Query: 476 GTLLSAC 482
T++++C
Sbjct: 617 NTIITSC 623
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 140/460 (30%), Positives = 241/460 (52%), Gaps = 9/460 (1%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+HA + G+ D IV N +++LY+K G ++ AR+VF+E+S R+ VSW AM+SG+ Q G
Sbjct: 64 IHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123
Query: 84 HLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
AL + QMH ++P Y+ +S +S+C + +G+ +HA K G+ S +FVGN+
Sbjct: 124 GEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNA 183
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
LI++Y++ G A V+ + + V+FN LI+G + E E+F+ M GL PD
Sbjct: 184 LITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPD 243
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+ + L C+ DL+KG LH K + S+ + +++ LY K + A F
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFN 303
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
L +++ WN + A D K +F +M G+RP+ FT+ IL C +
Sbjct: 304 LGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTA-GIRPNQFTYPCILRTCTCTGEID 362
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G+QIH+ ++ D+ V L++MY+K G + + ++ + ++VVSW ++IA +
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
H AL F++M+ GI PD++ ++ C +++G ++ G S D+
Sbjct: 423 QHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQG-LQIHARVYVSGYSGDV 481
Query: 441 EHFTCLIDLLGRAGKLLEA----EEYTKKFPLGQDPIVLG 476
+ L++L R G++ EA EE K + + +V G
Sbjct: 482 SIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSG 521
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 183/360 (50%), Gaps = 3/360 (0%)
Query: 103 FASAISACAGI-QSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA 161
FA A+ AC G + +IHA ++ G VGN LI +Y K G A V+ E
Sbjct: 44 FACALRACRGNGRRWQVVPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEEL 103
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
+ VS+ A+++G+ +N E+ +++ M R G++P + + L C+ + +G
Sbjct: 104 SARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGR 163
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
+H K S FVGN ++ LY + AE+ F + +D +++NT I+ + CA
Sbjct: 164 SVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCA 223
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
E L +F+EM + G+ PD T +S+LAACA L +Q G Q+H++L + ++ D +
Sbjct: 224 HGEHALEIFEEMQSS-GLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIME 282
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
+L+++Y KCG + + +FN NVV WN I+ A + +LF QM+ GI+
Sbjct: 283 GSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIR 342
Query: 402 PDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
P+ T+ +L C G + GE +S+ G D+ LID+ + G L +A
Sbjct: 343 PNQFTYPCILRTCTCTGEIDLGEQ-IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARR 401
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 203/606 (33%), Positives = 327/606 (53%), Gaps = 35/606 (5%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
L C+K++A GI +H ++KMG D+ V N +++ YA+CG++ ARKVFDEMSERN+
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
VSW++MI G+ + A++ F +M + PN ISACA ++ L G++++A
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ G + ++L+ MYMK A ++ E NL NA+ + +V +
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILH--------------C----- 225
VF LM+ G+ PDR S + CS ++ G H C
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 380
Query: 226 LTVKCKLESNPF------------VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTF 273
+ +KC + F N+I+A Y + + A + F + EK+++SWNT
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 274 IAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR 333
I+ + +E+ + VF M + GV D T SI +AC L ++ K I+ ++ +
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 334 LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFE 393
+ DV +G LV+M+++CG + +FN + +R+V +W I A A A++LF+
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 453
M G+KPD V F+G LTAC+H GLV++G+ F SM K +G+SP+ H+ C++DLLGRA
Sbjct: 561 DMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRA 620
Query: 454 GKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLS 513
G L EA + + P+ + ++ +LL+ACR++ +V + A+++ L P T YVLLS
Sbjct: 621 GLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLS 680
Query: 514 NLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLK 573
N+YAS G W D+A R +K+ GL+K P S I+++G +FT + SH ++ I ML
Sbjct: 681 NVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLD 740
Query: 574 TLSLAA 579
+S A
Sbjct: 741 EVSQRA 746
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 129/494 (26%), Positives = 223/494 (45%), Gaps = 47/494 (9%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCG---KMILARK 58
K+ S L +C L+ H ++ K G+ DV ++ + G + A++
Sbjct: 32 TKATPSSLKNCKTIDELKM---FHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKE 88
Query: 59 VFDEMSER--NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGI 113
VF E SE ++++I G+ +G A+ F +M + P++Y F +SACA
Sbjct: 89 VF-ENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKS 147
Query: 114 QSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALI 173
++ G QIH +K GYA FV NSL+ Y + G A V+ E E N+VS+ ++I
Sbjct: 148 RAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMI 207
Query: 174 AGFVENQQPEKGFEVFKLMLR-QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
G+ + ++F M+R + + P+ + + C+ DL G ++ +
Sbjct: 208 CGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI 267
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
E N + + ++ +Y K N I A++ F +L N + + L VF
Sbjct: 268 EVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNL 327
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC- 351
M D GVRPD + S +++C+ L ++ GK H +++R + NAL++MY KC
Sbjct: 328 MM-DSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCH 386
Query: 352 ------------------------------GLISCSYKLFNEMLHRNVVSWNTIIAAHAN 381
G + +++ F M +N+VSWNTII+
Sbjct: 387 RQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQ 446
Query: 382 HRLGGSALKLFEQMKAT-GIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
L A+++F M++ G+ D VT + + +AC H G + + + +EK GI D+
Sbjct: 447 GSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLDV 505
Query: 441 EHFTCLIDLLGRAG 454
T L+D+ R G
Sbjct: 506 RLGTTLVDMFSRCG 519
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 87/177 (49%), Gaps = 5/177 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+ C AL ++ + K GIQ DV + +++++++CG A +F+ +
Sbjct: 472 TMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ R++ +W+A I AG A+E F M L P+ F A++AC+ + +G+
Sbjct: 532 TNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGK 591
Query: 121 QIHAYSLKF-GYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIAG 175
+I LK G + ++ + + G +A+ L+ EPN V +N+L+A
Sbjct: 592 EIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAA 648
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 209/593 (35%), Positives = 326/593 (54%), Gaps = 49/593 (8%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQ-PDVIVSNHVLNLYAKCGKMILARKVF 60
+ + SLL C K+L LHA +++ + D+ + N ++++Y K G ++ AR+VF
Sbjct: 64 SSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVF 123
Query: 61 DEMSERNLVSWSAMISGH--HQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQS 115
DEM +N+VSW+AMI+ + H+ G+ AL FF +M + PN + FAS + AC ++
Sbjct: 124 DEMPVKNVVSWTAMIAAYARHEHGQE--ALGFFYEMQDVGIQPNHFTFASILPACTDLEV 181
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
L + H +K G+ S FVGN L+ MY K G A ++ + + ++VS+NA+IAG
Sbjct: 182 L---GEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAG 238
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+V+N E ++F+ + ++ ++ AG + V N + + E N
Sbjct: 239 YVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVE--------LFEKMPEQN 290
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
NT++A Y + + EA K F+++ E+++ISWN I+ + E+ L +FK M
Sbjct: 291 LVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPE 350
Query: 296 DHGV------------------------------RPDDFTFASILAACAGLASVQHGKQI 325
+ V +P+ TFA +L ACA LA ++ G +
Sbjct: 351 CNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEA 410
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
H +IR DV VGN LV MYAKCG I + K+F+ M ++ S + +I +A +
Sbjct: 411 HEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCS 470
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
+L+LFEQM+ TG+KPD VTF+G+L+AC HAGLV EG YF+ M + Y I+P +EH+ C
Sbjct: 471 KESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGC 530
Query: 446 LIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTT 505
+IDLLGRAG EA + K P+ D + G+LLSACR ++ +GE++A+ L L P
Sbjct: 531 MIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQN 590
Query: 506 TSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVA 558
+PYVLLSN+YA+ G W D+ R +KD +KK+ S I ++ F V
Sbjct: 591 PAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKKKLGCSWIVIKKQVHAFLVG 643
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 137/269 (50%), Gaps = 9/269 (3%)
Query: 170 NALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK 229
+ L+ + + + + + M+ G+ P ++ L+ C + L +LH ++
Sbjct: 33 DGLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQ 92
Query: 230 CKLESNPF-VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLS 288
+ E +GN ++++Y K + EA + F + K+++SW IAA + ++ L
Sbjct: 93 TQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALG 152
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMY 348
F EM D G++P+ FTFASIL AC L + + H +++ +V VGN LV+MY
Sbjct: 153 FFYEMQ-DVGIQPNHFTFASILPACTDLEVL---GEFHDEIVKGGFESNVFVGNGLVDMY 208
Query: 349 AKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
AK G I + +LF++M R+VVSWN +IA + + L ALKLF+++ K D +T+
Sbjct: 209 AKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIP----KRDVITWN 264
Query: 409 GLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
++ G V+ F M + +S
Sbjct: 265 TMMAGYAQCGDVENAVELFEKMPEQNLVS 293
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 99/185 (53%), Gaps = 6/185 (3%)
Query: 284 EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN-QDVGVGN 342
+ L + ++M ++G+ P T+ S+L C S+ K +HAH+I+ + QD+ +GN
Sbjct: 46 REALHILQDMV-ENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGN 104
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
LV++Y K G + + ++F+EM +NVVSW +IAA+A H G AL F +M+ GI+P
Sbjct: 105 KLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQP 164
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
+ TF +L AC ++ E F+ G ++ L+D+ + G + A E
Sbjct: 165 NHFTFASILPACTDLEVLGE----FHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFAREL 220
Query: 463 TKKFP 467
K P
Sbjct: 221 FDKMP 225
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 195/581 (33%), Positives = 321/581 (55%), Gaps = 11/581 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
++S + CS L+ G +H + + D V N +++LY KC ++ ARK+FD M
Sbjct: 224 LASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCME 283
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFF---SQMHLLPNEYIFASAISACAGIQSLVKGQQ 121
RNLVSW+ MISG+ Q + A+ F +Q P+ + S +++C + ++ +G+Q
Sbjct: 284 YRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQ 343
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
IHA+ +K + +V N+LI MY K + ++A V+ E + +S+NA+I G+ +N+
Sbjct: 344 IHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRD 403
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ +F+ M L P +F L + S + +H L +K + + +
Sbjct: 404 LAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASA 463
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +YSK +L+ +A+ F ++ KD++ WN+ I + E+ + +F ++ G+ P
Sbjct: 464 LIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLS-GMAP 522
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
++FTF +++ + LAS+ HG+Q HA +I+ ++ D V NAL++MYAKCG I LF
Sbjct: 523 NEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLF 582
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+V+ WN++I +A H AL++F M ++P+ VTF+G+L+AC HAG V
Sbjct: 583 ESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVG 642
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
EG +FNSM+ Y I P IEH+ +++L GR+GKL A+E+ ++ P+ V +LLSA
Sbjct: 643 EGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSA 702
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
C L + IG A+ PT + PYVLLSN+YAS G+W DV R+ + SG KE
Sbjct: 703 CHLFGNAEIGRYAAEMALLADPTDSGPYVLLSNIYASKGLWADVHNLRQQMDSSGTVKET 762
Query: 542 SYSMIEVQGTFEKFTV-------AEFSHSKIGEINYMLKTL 575
S IEV F V AE +S + E+ ++K L
Sbjct: 763 GCSWIEVTKEVHTFIVRGREHPEAELIYSVLDELTSLIKNL 803
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/465 (29%), Positives = 245/465 (52%), Gaps = 9/465 (1%)
Query: 3 KSISSLLHHCSKT---KALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKV 59
+S++ +L C T + + ++HA G D+ ++N +L Y+ G++ AR +
Sbjct: 16 RSLARVLLSCLPTGGDRLRRLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHL 75
Query: 60 FDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL----LPNEYIFASAISACAGIQS 115
FD M RNLVSW ++IS + Q G A+ F +PNE++ AS + AC ++
Sbjct: 76 FDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKA 135
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
+ G+Q+H ++K + +VG +LI++Y K+G +A+LV+ V++N +I G
Sbjct: 136 VSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITG 195
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+ + E+F M +G+ PDRF A + CS L G +H + E++
Sbjct: 196 YAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETD 255
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
V N ++ LY K + + A K F +E ++L+SW T I+ + + +++F M+
Sbjct: 256 TSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQ 315
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
G +PD F SIL +C LA++ G+QIHAH+I+ L D V NAL++MYAKC ++
Sbjct: 316 -AGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLT 374
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ +F+ + + +S+N +I ++ +R A+ +F++M+ ++P +TF+ LL +
Sbjct: 375 EARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLL-GVS 433
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
+ L E + + G S D+ + LID+ + + +A+
Sbjct: 434 SSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAK 478
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 123/241 (51%), Gaps = 6/241 (2%)
Query: 227 TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKG 286
TV +L+ + F+ N ++ YS + +A F + ++L+SW + I+ + +
Sbjct: 45 TVAGRLD-DLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDCA 103
Query: 287 LSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVN 346
+S+F P++F AS+L AC +V G+Q+H +++ L+ +V VG AL+N
Sbjct: 104 ISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALIN 163
Query: 347 MYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVT 406
+YAK G + + +F+ + R V+WNT+I +A GG AL+LF++M G++PD
Sbjct: 164 LYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFV 223
Query: 407 FIGLLTACNHAGLVKEGE-----AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
++AC+ G ++ G AY ++ E + + C L A KL + E
Sbjct: 224 LASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCME 283
Query: 462 Y 462
Y
Sbjct: 284 Y 284
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 213/644 (33%), Positives = 327/644 (50%), Gaps = 81/644 (12%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+SLL C +++ Q LH +LK QP+ +SN+++ Y K G + A VFD + +
Sbjct: 9 ASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQ 68
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLP----------------------- 98
NL SW+ ++S + + G SQM +L+P
Sbjct: 69 PNLFSWNTILSVYSKLG-------LLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDA 121
Query: 99 ---------------NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLIS 143
N F++ + C+ + + G+QI+ LKFG+ S FVG+ L+
Sbjct: 122 VRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVD 181
Query: 144 MYMKVGYSSDALLVYGEAFEPNLV-------------------------------SFNAL 172
MY K+G DA + E E N+V S+ +
Sbjct: 182 MYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIM 241
Query: 173 IAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
I G ++N + ++F+ M G D+F+F L C L +G +H ++
Sbjct: 242 ITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDH 301
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
+ N FVG+ ++ +YSK I AE F+ + +K++ISW + E+ + +F E
Sbjct: 302 KDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFE 361
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
M + GV PDDFT S++++CA LAS++ G Q H + L + V NAL+ +Y KCG
Sbjct: 362 MQRN-GVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCG 420
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
S++LF EM R+ VSW ++A +A + LFE+M A G+KPD VTFIG+L+
Sbjct: 421 STENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLS 480
Query: 413 ACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDP 472
AC+ AGLV++G YF SM K +GI P ++H TC+IDLLGRAG+L EA + P D
Sbjct: 481 ACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDV 540
Query: 473 IVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKML 532
+ TLLS+CR+ D+ IG+ A L L+P + YVLLS+LYAS G W VA R+ +
Sbjct: 541 VGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGM 600
Query: 533 KDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
+D ++KEP YS I+ +G F+ + S +G+I L+ L+
Sbjct: 601 RDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLN 644
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 205/427 (48%), Gaps = 46/427 (10%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S++L CSK + + G ++ +LK G DV V + ++++Y K G + A++ FDEM
Sbjct: 140 TFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEM 199
Query: 64 SERNLV-------------------------------SWSAMISGHHQAGEHLLALEFFS 92
ERN+V SW+ MI+G Q G AL+ F
Sbjct: 200 PERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFR 259
Query: 93 QMHLLP---NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
+M L +++ F S ++AC + +L +G+QIHAY ++ + FVG++L+ MY K
Sbjct: 260 EMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCR 319
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
A V+ + N++S+ A++ G+ +N E+ ++F M R G+ PD F+ +
Sbjct: 320 SIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVIS 379
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE---KD 266
C+ L +G HC + L S V N ++ LY K G E + RL E +D
Sbjct: 380 SCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGK---CGSTENSHRLFTEMNIRD 436
Query: 267 LISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
+SW +A + + + +F+ M HG++PD TF +L+AC+ V+ G Q
Sbjct: 437 EVSWTALLAGYAQFGKANETIGLFERMLA-HGLKPDGVTFIGVLSACSRAGLVEKGLQYF 495
Query: 327 AHLIRMR-LNQDVGVGNALVNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAA---HAN 381
+I+ + V ++++ + G + + N M H +VV W T++++ H +
Sbjct: 496 ESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGD 555
Query: 382 HRLGGSA 388
+G A
Sbjct: 556 MEIGKWA 562
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 190/415 (45%), Gaps = 65/415 (15%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+AS + C Q+ + +++H LK +F+ N+LI+ Y K+G + A V+
Sbjct: 8 YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67
Query: 163 EPNLVSFNAL-------------------------------IAGFVENQQPEKGFEVFKL 191
+PNL S+N + I+G+ V+KL
Sbjct: 68 QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127
Query: 192 MLRQGLLP-DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN 250
ML+ + +R +F+ L +CS + G ++ +K S+ FVG+ ++ +Y+K
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187
Query: 251 LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYE-------------------------- 284
LI +A++ F + E++++ NT I C E
Sbjct: 188 LIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQ 247
Query: 285 -----KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG 339
+ L +F+EM G D FTF S+L AC L ++ GKQIHA++IR +V
Sbjct: 248 NGLEREALDMFREM-RLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVF 306
Query: 340 VGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG 399
VG+ALV+MY+KC I + +F M +NV+SW ++ + + A+K+F +M+ G
Sbjct: 307 VGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNG 366
Query: 400 IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
++PD T ++++C + ++EG A F+ G+ I LI L G+ G
Sbjct: 367 VEPDDFTLGSVISSCANLASLEEG-AQFHCRALVSGLISFITVSNALITLYGKCG 420
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 133/326 (40%), Gaps = 63/326 (19%)
Query: 204 FAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIE 263
+A L++C S + + LHCL +K + F+ N ++ Y K + A F I
Sbjct: 8 YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67
Query: 264 EKDLISWNTFIA----------------------------ACSHCADY---EKGLSVFKE 292
+ +L SWNT ++ A S A+Y + V+K
Sbjct: 68 QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
M D + + TF+++L C+ V G+QI+ +++ DV VG+ LV+MY K G
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187
Query: 353 LISCSYKLFNEMLHRNVV-------------------------------SWNTIIAAHAN 381
LI + + F+EM RNVV SW +I
Sbjct: 188 LIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQ 247
Query: 382 HRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIE 441
+ L AL +F +M+ G D TF +LTAC + EG+ + +T ++
Sbjct: 248 NGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRT-DHKDNVF 306
Query: 442 HFTCLIDLLGRAGKLLEAEEYTKKFP 467
+ L+D+ + + AE K+ P
Sbjct: 307 VGSALVDMYSKCRSIKSAETVFKRMP 332
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 195/568 (34%), Positives = 322/568 (56%), Gaps = 13/568 (2%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L+ G +H V++ G+ V V N ++N+Y K G + AR VF +M+E +L+SW+ MISG
Sbjct: 951 LELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISG 1010
Query: 78 HHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQS-LVKGQQIHAYSLKFGYAS 133
+G ++ F + LLP+++ AS + AC+ ++ QIHA ++K G
Sbjct: 1011 CTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVL 1070
Query: 134 ISFVGNSLISMYMKVGYSSDA--LLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKL 191
SFV +LI +Y K G +A L V + F+ L S+NA++ G++ + K ++ L
Sbjct: 1071 DSFVSTALIDVYSKRGKMEEAEFLFVNQDGFD--LASWNAIMHGYIVSGDFPKALRLYIL 1128
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
M G D+ + + L++G +H + VK + FV + ++ +Y K
Sbjct: 1129 MQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGE 1188
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ A + F I D ++W T I+ C E L + +M V+PD++TFA+++
Sbjct: 1189 MESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSK-VQPDEYTFATLVK 1247
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
AC+ L +++ G+QIHA+++++ D V +LV+MYAKCG I + LF R + S
Sbjct: 1248 ACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIAS 1307
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
WN +I A H AL+ F+ MK+ G+ PD VTFIG+L+AC+H+GLV E F SM+
Sbjct: 1308 WNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQ 1367
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
K YGI P+IEH++CL+D L RAG++ EAE+ P + TLL+ACR++ D G
Sbjct: 1368 KNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETG 1427
Query: 492 ERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGT 551
+R+A++L L+P+ ++ YVLLSN+YA+ W +VA AR M++ +KK+P +S ++++
Sbjct: 1428 KRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNK 1487
Query: 552 FEKFTVAEFSHSKI----GEINYMLKTL 575
F + SH + ++ Y++K +
Sbjct: 1488 VHLFVAGDRSHEETDVIYNKVEYIMKRI 1515
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/453 (28%), Positives = 223/453 (49%), Gaps = 24/453 (5%)
Query: 30 KMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER---------NLVSWSAMISGHHQ 80
+ G +PD V+ L+ KC K IL K F + + +++ W+ +S Q
Sbjct: 854 RTGFRPD-DVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDDDGSDVIVWNKALSRFLQ 912
Query: 81 AGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
GE A++ F M + + F ++ AG+ L G+QIH ++ G + V
Sbjct: 913 RGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSV 972
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
GN LI+MY+K G S A V+G+ E +L+S+N +I+G + E +F +LR L
Sbjct: 973 GNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSL 1032
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMIL----HCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
LPD+F+ A L CS L G L H +K + + FV ++ +YSK +
Sbjct: 1033 LPDQFTVASVLRACS---SLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKME 1089
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
EAE F + DL SWN + D+ K L ++ M + G R D T + A
Sbjct: 1090 EAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILM-QESGERSDQITLVNAAKAA 1148
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
GL ++ GKQIHA +++ N D+ V + +++MY KCG + + ++F+E+ + V+W
Sbjct: 1149 GGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWT 1208
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG-EAYFNSMEK 432
T+I+ + AL + QM+ + ++PD TF L+ AC+ +++G + + N ++
Sbjct: 1209 TMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKL 1268
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKK 465
P + T L+D+ + G + +A K+
Sbjct: 1269 NCAFDPFV--MTSLVDMYAKCGNIEDARGLFKR 1299
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 205/466 (43%), Gaps = 46/466 (9%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE- 65
S+L L G HA +L G PD V+N+++ +YAKCG + ARK+FD +
Sbjct: 661 SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720
Query: 66 -RNLVSWSAMISG------HHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVK 118
R+LV+W+A++S G HL L + + + A C S
Sbjct: 721 NRDLVTWNAILSALAAHADKSHDGFHLFRL--LRRSVVSTTRHTLAPVFKMCLLSASPSA 778
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+ +H Y++K G FV +L+++Y K G +A +++ ++V +N ++ +V+
Sbjct: 779 SESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVD 838
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ +F R G PD + L L+ K + N
Sbjct: 839 TCLEYEAMLLFSEFHRTGFRPD-------------------DVTLRTLSRVVKCKKNILE 879
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
A +K + + + D+I WN ++ + + + F +M N
Sbjct: 880 LKQFKAYATKLFMYDD--------DGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSR- 930
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
V D TF +L AGL ++ GKQIH ++R L+Q V VGN L+NMY K G +S +
Sbjct: 931 VACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRAR 990
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+F +M +++SWNT+I+ L ++ +F + + PD T +L AC+
Sbjct: 991 SVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSL- 1049
Query: 419 LVKEGEAYF----NSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
EG Y ++ G+ D T LID+ + GK+ EAE
Sbjct: 1050 ---EGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAE 1092
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 216/464 (46%), Gaps = 34/464 (7%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
SLH +K+G+Q DV V+ ++N+YAK G + AR +FD M+ R++V W+ M+ +
Sbjct: 781 SLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTC 840
Query: 83 EHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
A+ FS+ H P++ + +++++ +Q AY+ K
Sbjct: 841 LEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATK----------- 889
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
++M Y D +++ +N ++ F++ + + + F M+ +
Sbjct: 890 ----LFM---YDDDG---------SDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVAC 933
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
D +F L + + N L G +H + ++ L+ VGN ++ +Y K + A F
Sbjct: 934 DGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVF 993
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+ E DLISWNT I+ C+ E + +F + D + PD FT AS+L AC+ L
Sbjct: 994 GQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRD-SLLPDQFTVASVLRACSSLEGG 1052
Query: 320 QH-GKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA 378
+ QIHA ++ + D V AL+++Y+K G + + LF ++ SWN I+
Sbjct: 1053 YYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHG 1112
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISP 438
+ AL+L+ M+ +G + D +T + A +K+G+ + K G +
Sbjct: 1113 YIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKR-GFNL 1171
Query: 439 DIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
D+ + ++D+ + G++ A + P D + T++S C
Sbjct: 1172 DLFVTSGVLDMYLKCGEMESARRVFSEIP-SPDDVAWTTMISGC 1214
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 172/400 (43%), Gaps = 48/400 (12%)
Query: 94 MHLLPNEY-IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSS 152
+H LP + I AI+A L G++ HA L G+ FV N+LI+MY K G S
Sbjct: 653 IHSLPQCFSILRQAIAA----SDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLS 708
Query: 153 DALLVYGEAFEPN--LVSFNALIAGFVEN-QQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
A ++ + N LV++NA+++ + + GF +F+L+ R + R + A +
Sbjct: 709 SARKLFDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFK 768
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
+C +S LH VK L+ + FV ++ +Y+KF LI EA F + +D++
Sbjct: 769 MCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVL 828
Query: 270 WNTFIAA-CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
WN + A C +YE L +F E G RPDD T ++ ++ KQ A+
Sbjct: 829 WNVMMKAYVDTCLEYEAML-LFSEFHRT-GFRPDDVTLRTLSRVVKCKKNILELKQFKAY 886
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
++ + D G +V+ WN ++ A
Sbjct: 887 ATKLFMYDDDG---------------------------SDVIVWNKALSRFLQRGEAWEA 919
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID 448
+ F M + + D +TF+ +LT ++ G+ + ++ G+ + CLI+
Sbjct: 920 VDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRS-GLDQVVSVGNCLIN 978
Query: 449 LLGRAGKLLEAEEYTKKFPLGQ----DPIVLGTLLSACRL 484
+ +AG + A GQ D I T++S C L
Sbjct: 979 MYVKAGSVSRARSV-----FGQMNEVDLISWNTMISGCTL 1013
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 4/131 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++L+ CS AL+QG +HA ++K+ D V ++++YAKCG + AR +F
Sbjct: 1241 TFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRT 1300
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+ R + SW+AMI G Q G AL+FF M ++P+ F +SAC+ LV
Sbjct: 1301 NTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSH-SGLVSEA 1359
Query: 121 QIHAYSLKFGY 131
+ YS++ Y
Sbjct: 1360 YENFYSMQKNY 1370
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 190/585 (32%), Positives = 330/585 (56%), Gaps = 20/585 (3%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LLH C + +L ++H + K G D+ V+ ++N Y +CG AR++FD M ERN
Sbjct: 84 LLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERN 143
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHA 124
+V+W+A+++G+ + L LE F +M + P+ Y + ++AC + G+Q+H
Sbjct: 144 VVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHG 203
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ-PE 183
Y++K+G SI+ +GNSL S+Y K+G AL + E N++++ +I+ E+++ E
Sbjct: 204 YAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVE 263
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
G +F ML G++P+ F+ + +C DL G + + K E+N V N+ M
Sbjct: 264 LGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTM 323
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEK-----------GLSVFKE 292
LY + EA + F +E+ +I+WN I+ + D K L++F++
Sbjct: 324 YLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRD 383
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
+ ++PD FTF+SIL+ C+ + +++ G+QIHA I+ DV V +ALVNMY KCG
Sbjct: 384 LKRSV-MKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCG 442
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
I + K F EM R V+W ++I+ ++ H A++LFE+M+ G++P+ +TF+ LL+
Sbjct: 443 CIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLS 502
Query: 413 ACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDP 472
AC++AGLV+E E YF+ M+K Y I P ++H+ C+ID+ R G++ +A + K+ +
Sbjct: 503 ACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNE 562
Query: 473 IVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKML 532
+ +L++ CR ++ + A +L L+P Y+LL N+Y S W DVA RK++
Sbjct: 563 AIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLM 622
Query: 533 K--DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
K D G+ ++ S+ I+ + F F + +H + E+ +L+ L
Sbjct: 623 KQEDVGILRDRSWITIKDKVYF--FRANDRTHPQATELYQLLENL 665
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 193/378 (51%), Gaps = 14/378 (3%)
Query: 102 IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA 161
++ + C + SL + +H + K G + FV SL++ YM+ G + DA ++
Sbjct: 80 MYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGM 139
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
E N+V++ AL+ G+ N QP G EVF ML G P ++ L C S D+ G
Sbjct: 140 PERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGK 199
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
+H +K ES +GN++ +LY+K + A +AF I EK++I+W T I+AC+
Sbjct: 200 QVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDE 259
Query: 282 D-YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV 340
+ E GLS+F +M D GV P++FT S+++ C + GKQ+ A ++ ++ V
Sbjct: 260 ECVELGLSLFIDMLMD-GVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPV 318
Query: 341 GNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN-----------HRLGGSAL 389
N+ + +Y + G + +LF +M ++++WN +I+ +A G AL
Sbjct: 319 KNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQAL 378
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
+F +K + +KPD TF +L+ C+ +++GE K+ G D+ + L+++
Sbjct: 379 TIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKS-GFLSDVVVNSALVNM 437
Query: 450 LGRAGKLLEAEEYTKKFP 467
+ G + +A + + P
Sbjct: 438 YNKCGCIQDANKAFLEMP 455
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 214/426 (50%), Gaps = 21/426 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ + L+ C + + G +H +K G + + N + +LYAK G + A + F +
Sbjct: 181 TLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRI 240
Query: 64 SERNLVSWSAMISGHHQAGEHL-LALEFFSQMHL---LPNEYIFASAISACAGIQSLVKG 119
E+N+++W+ MIS + E + L L F M + +PNE+ S +S C L G
Sbjct: 241 PEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLG 300
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+ A+S K G + V NS + +Y++ G + +A+ ++ + + +++++NA+I+G+ +
Sbjct: 301 KQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQI 360
Query: 180 --------QQPEKGFE---VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV 228
Q +GF+ +F+ + R + PD F+F+ L +CS L +G +H T+
Sbjct: 361 MDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTI 420
Query: 229 KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLS 288
K S+ V + ++ +Y+K I +A KAF + + ++W + I+ S ++ +
Sbjct: 421 KSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQ 480
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNM 347
+F+EM GVRP++ TF S+L+AC+ V+ + + + + V +++M
Sbjct: 481 LFEEM-RLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDM 539
Query: 348 YAKCGLISCSYKLFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV- 405
+ + G + ++ N W++++A +H G L + K +KP +
Sbjct: 540 FVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSH--GNMELAFYAADKLLELKPKGIE 597
Query: 406 TFIGLL 411
T+I LL
Sbjct: 598 TYILLL 603
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 114/219 (52%), Gaps = 21/219 (9%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+L CS AL+QG +HA +K G DV+V++ ++N+Y KCG + A K F EM
Sbjct: 395 TFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEM 454
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
R V+W++MISG+ Q G+ A++ F +M L PNE F S +SAC+ LV+
Sbjct: 455 PTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACS-YAGLVEEA 513
Query: 121 QIHAYSLKFGYASISFVGN--SLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIAGFV 177
+ + +K Y V + +I M++++G DA + FEPN +++L+AG
Sbjct: 514 EHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCR 573
Query: 178 ENQQPE--------------KGFEVFKLMLRQGLLPDRF 202
+ E KG E + L+L + +R+
Sbjct: 574 SHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERW 612
>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 194/558 (34%), Positives = 324/558 (58%), Gaps = 2/558 (0%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L G ++HA V++ + DV+ N+++ LY KCG++ LAR+VFD M RN VS + ++SG
Sbjct: 32 LSLGKAVHARVVRAA-RFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSG 90
Query: 78 HHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
+ +G H AL NEY+ +SA++A A ++S G+Q H Y++K G A +V
Sbjct: 91 YASSGRHRDALALLRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYV 150
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
++++ MY + + +A+ V+ N+ +FN++I GF++ Q + + + M+R
Sbjct: 151 CSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVG 210
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
D S+ L C+ + ++ G +H +K +LE N +VG+ ++ +Y K + EA +
Sbjct: 211 QWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANR 270
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F ++ EK+++SW + A + +E L +F +M + GVRP++FT+A L +CAGLA
Sbjct: 271 VFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEME-GVRPNEFTYAVALNSCAGLA 329
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
++++G + A ++ + V NAL+NMY+K G + + ++F M R+VVSWN+II
Sbjct: 330 TLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIII 389
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
+A+H A++ F M P VTFIG+L+AC GLV EG Y N M K G+
Sbjct: 390 GYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVK 449
Query: 438 PDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQ 497
P EH+TC++ LL R G+L EAE + + +G D + +LLS+C++ R+ +G R+A+Q
Sbjct: 450 PGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQ 509
Query: 498 LFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTV 557
+F L+P YVLLSN+YA W V R+++++ G++KEP S I+V FT
Sbjct: 510 IFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVHVFTS 569
Query: 558 AEFSHSKIGEINYMLKTL 575
+ H + +I L+ L
Sbjct: 570 EDKKHPYMEQITKKLQEL 587
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 199/418 (47%), Gaps = 18/418 (4%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+SS + + ++ G H +K G+ V + VL++Y +C M A KVFD +S
Sbjct: 116 LSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVKVFDNVS 175
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISA---CAGIQSLVKGQQ 121
N+ ++++MI+G G+ + M ++ S ++ CA + +V G Q
Sbjct: 176 SFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHCASTKEVVLGSQ 235
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H +LK +VG++L+ MY K + +A V+ E N+VS+ A++ + +N+
Sbjct: 236 VHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNEL 295
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
E ++F M +G+ P+ F++A L C+ L+ G L T+K V N
Sbjct: 296 FEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNA 355
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+M +YSK + +A + F + +D++SWN+ I +H + + F +M V P
Sbjct: 356 LMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEV-P 414
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG------NALVNMYAKCGLIS 355
TF +L+ACA L V G + I M+ +VGV +V + + G +
Sbjct: 415 SYVTFIGVLSACAQLGLVDEG--FYYLNIMMK---EVGVKPGKEHYTCMVGLLCRVGRLD 469
Query: 356 CSYKLF-NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
+ + + + +VV+W +++++ +R G ++ EQ+ +KP V LL+
Sbjct: 470 EAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQI--FQLKPKDVGTYVLLS 525
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 160/308 (51%), Gaps = 14/308 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S ++L HC+ TK + G +H LK ++ +V V + ++++Y KC A +VF+ +
Sbjct: 216 SYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVL 275
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
E+N+VSW+A+++ + Q AL+ F M + PNE+ +A A+++CAG+ +L G
Sbjct: 276 PEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGN 335
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+ A ++K G+ + V N+L++MY K G DA V+ ++VS+N++I G+ +
Sbjct: 336 ALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHG 395
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVG 239
+ + E F ML +P +F G L C+ + +G L+ + + ++
Sbjct: 396 RAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHY 455
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEK----DLISWNTFIAACSHCADYEKGLSVFKEMSN 295
++ L + + EAE R IE D+++W + +++C +Y G V +++
Sbjct: 456 TCMVGLLCRVGRLDEAE---RFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQ 512
Query: 296 DHGVRPDD 303
++P D
Sbjct: 513 ---LKPKD 517
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 207/606 (34%), Positives = 328/606 (54%), Gaps = 35/606 (5%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
L C+K++ GI +H ++KM D+ V N +++ YA+CG++ ARKVFDEMSERN+
Sbjct: 140 LSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNV 199
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
VSW++MI G+ + A++ F +M ++PN ISACA ++ L G++++
Sbjct: 200 VSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYD 259
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ G + ++L+ MYMK A ++ E NL NA+ + +V ++
Sbjct: 260 FIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKE 319
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
V LM+ G+ PDR S + CS ++ G H ++ ES + N ++
Sbjct: 320 ALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 379
Query: 245 LYSK---------------------FNLI-------GEAEKA---FRLIEEKDLISWNTF 273
+Y K +N I GE + A F + EK+++SWNT
Sbjct: 380 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTI 439
Query: 274 IAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR 333
I+A YE+ + VF M + V D T SI +AC L ++ K I+ ++ + R
Sbjct: 440 ISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNR 499
Query: 334 LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFE 393
+ DV +G LV+M+++CG + +FN + +R+V +W I A A A++LF
Sbjct: 500 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFN 559
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 453
+M G+KPD V FIG LTAC H GLV++G+ FNSMEK +G+SP+ H+ C++DLLGRA
Sbjct: 560 EMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRA 619
Query: 454 GKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLS 513
G L EA + K P + ++ +LL+ACR++ +V + A+++ L P T YVLLS
Sbjct: 620 GLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLS 679
Query: 514 NLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLK 573
N+YAS G W D+A R +K+ GL+K P S+I+++G +FT + SH ++ +I ML
Sbjct: 680 NVYASAGRWNDMAKVRLSMKEKGLRKPPGTSVIQIRGKTHEFTSGDESHPEMRKIEAMLD 739
Query: 574 TLSLAA 579
LS A
Sbjct: 740 ELSQRA 745
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 122/493 (24%), Positives = 221/493 (44%), Gaps = 45/493 (9%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCG---KMILARK 58
K+ S L +C L+ H ++ K G+ DV ++ + G + A++
Sbjct: 31 TKATPSSLKNCKTIDELKM---FHLSLTKQGLDDDVSAITKLVARSCELGTRESLSFAKE 87
Query: 59 VFDE-MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQ 114
VF+ S ++++I G+ +G A+ F +M + P++Y F +S CA +
Sbjct: 88 VFENGESYGTCFMYNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSR 147
Query: 115 SLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIA 174
G QIH +K YA FV NSL+ Y + G A V+ E E N+VS+ ++I
Sbjct: 148 DKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMIC 207
Query: 175 GFVENQQPEKGFEVFKLMLR-QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE 233
G+ + + ++F M+R + ++P+ + + C+ DL G ++ +E
Sbjct: 208 GYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIE 267
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
N + + ++ +Y K N I A++ F +L N + ++ L V M
Sbjct: 268 VNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLM 327
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC-- 351
D G+RPD + S +++C+ L ++ GK H +++R + NAL++MY KC
Sbjct: 328 M-DSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHR 386
Query: 352 -----------------------------GLISCSYKLFNEMLHRNVVSWNTIIAAHANH 382
G + +++ FN M +N+VSWNTII+A
Sbjct: 387 QDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQE 446
Query: 383 RLGGSALKLFEQMKATG-IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIE 441
+ A+++F M++ + D VT + + +AC H G + + + +EK I D+
Sbjct: 447 NMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNR-IQLDVR 505
Query: 442 HFTCLIDLLGRAG 454
T L+D+ R G
Sbjct: 506 LGTTLVDMFSRCG 518
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 97/204 (47%), Gaps = 9/204 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+ C AL ++ + K IQ DV + +++++++CG A +F+ +
Sbjct: 471 TMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 530
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ R++ +W+A I AG A+E F++M L P+ +F A++AC + +G+
Sbjct: 531 TNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGK 590
Query: 121 QIHAYSLKF-GYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIAGF-V 177
+I K G + ++ + + G +AL L+ EPN V +N+L+A V
Sbjct: 591 EIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIWNSLLAACRV 650
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDR 201
+ F K+ Q L P+R
Sbjct: 651 QGNVEMAAFAAEKI---QVLAPER 671
>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 190/555 (34%), Positives = 311/555 (56%), Gaps = 5/555 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L C + + G ++H V+K G++ D +++N ++ +Y+KC A +VF +
Sbjct: 264 TLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARI 323
Query: 64 SERNLVSWSAMIS---GHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
E ++V S MIS H A E S M + PN+Y F + + +
Sbjct: 324 DEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCR 383
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IHA+ +K G++ V ++++ MY+K G DA+L + P++ S+N L++GF
Sbjct: 384 SIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGN 443
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E G +FK ++ +G+L +++++ G L C+ DLR G +H +K + + V
Sbjct: 444 NCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSK 503
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y + A F ++E+D+ SW ++ + + EK + F+ M ++ R
Sbjct: 504 MLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENK-R 562
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P+D T A+ L+ C+ LA + G Q+H++ I+ N V V +ALV+MY KCG ++ + L
Sbjct: 563 PNDATLATSLSVCSDLACLGSGLQLHSYTIKSGWNSSV-VSSALVDMYVKCGNLADAEML 621
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+E ++V WNTII +A H G AL+ F++M G PD +TF+G+L+AC+HAGL+
Sbjct: 622 FDESDTHDLVEWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLL 681
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG YF + YGI+P +EH+ C++D+L +AGKL EAE + PL D + T+L
Sbjct: 682 DEGRRYFKLLSSVYGITPTLEHYACMVDILAKAGKLAEAESLINEMPLTPDASLWKTILG 741
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ ++ I ER A++LF QP S +LLSN+YA W DVA R ML D G+KKE
Sbjct: 742 ACRMHGNIEIAERAAEKLFESQPDDISSCILLSNIYADLKRWNDVAKLRSMLVDRGVKKE 801
Query: 541 PSYSMIEVQGTFEKF 555
P S IE+ G F
Sbjct: 802 PGCSWIEINGKLHVF 816
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 218/416 (52%), Gaps = 4/416 (0%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+S ++ L C+ ++AL++G +LHA +L+ G +PD + + +LN+Y KCG++ AR VFD
Sbjct: 61 RSYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDG 120
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
M R++V+W+AM+S AG+ AL F++M ++PN + A+A+ AC L
Sbjct: 121 MPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFT 180
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
Q+HA ++K +V +SL+ Y+ G A ++ + VS+NAL+ + +
Sbjct: 181 PQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARD 240
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
K VF ++ G +++ L+ C + G +H L +K LE++ +
Sbjct: 241 GDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLN 300
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N ++ +YSK +A + F I+E D++ + I+ + +F +MS D GV
Sbjct: 301 NCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMS-DMGV 359
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+P+ +TF + + V + IHAH+++ ++ GV +A+V MY K G + +
Sbjct: 360 KPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAIL 419
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
F+ M ++ SWNT+++ + L++F+++ G+ + T++G+L C
Sbjct: 420 AFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCT 475
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 220/460 (47%), Gaps = 6/460 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++++ L C+ L +HA +K+ D VS+ ++ Y CG++ +A + +
Sbjct: 163 ALAAALKACTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDS 222
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNE---YIFASAISACAGIQSLVKGQ 120
R+ VSW+A+++ + + G++ + F ++ +E Y + + C + GQ
Sbjct: 223 PVRSDVSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQ 282
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H +K G + + N LI MY K + DA V+ EP++V + +I+ F +
Sbjct: 283 AVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHD 342
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ F++F M G+ P++++F G + S + D+ +H VK V +
Sbjct: 343 MAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCD 402
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
I+ +Y K + +A AF L++ D+ SWNT ++ + E GL +FKE+ + GV
Sbjct: 403 AIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICE-GVL 461
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ +T+ IL C L ++ G Q+HA +++ D V L++MY + G + + +
Sbjct: 462 ANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLV 521
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+ + R+V SW +++ +A G A++ F M +P+ T L+ C+ +
Sbjct: 522 FDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACL 581
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
G + K+ S + + L+D+ + G L +AE
Sbjct: 582 GSGLQLHSYTIKSGWNSSVVS--SALVDMYVKCGNLADAE 619
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 160/318 (50%), Gaps = 1/318 (0%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+A+A+ CA ++L +G+ +HA L+ G +F+ +SL++MY K G +DA V+
Sbjct: 63 YAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGMP 122
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
++V++ A+++ +F M +G++P+ F+ A L+ C+V +DL
Sbjct: 123 HRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQ 182
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
+H VK + +P+V ++++ Y + AE+A + +SWN + + D
Sbjct: 183 VHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGD 242
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
Y K + VF ++ + G +T ++L C L + G+ +H +I+ L D + N
Sbjct: 243 YAKVMLVFDKLV-ESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNN 301
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
L+ MY+KC +Y++F + +VV + +I+ H + A +F QM G+KP
Sbjct: 302 CLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKP 361
Query: 403 DSVTFIGLLTACNHAGLV 420
+ TF+GL + G V
Sbjct: 362 NQYTFVGLAIVASRTGDV 379
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 196/573 (34%), Positives = 324/573 (56%), Gaps = 7/573 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +L C L +G +H V++ G + D+ V N ++ +Y KCG + AR +FD M
Sbjct: 198 TFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRM 257
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
R+++SW+AMISG+ + G LE F M L P+ S ISAC + G+
Sbjct: 258 PRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGR 317
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IHAY + G+A V NSL MY+ G +A ++ ++VS+ +I+G+ N
Sbjct: 318 DIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNF 377
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
P+K + +++M + + PD + A L C+ DL G+ LH L +K +L S V N
Sbjct: 378 LPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVAN 437
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +YSK I +A F I K++ISW + IA + L ++M ++
Sbjct: 438 NLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK--MTLQ 495
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P+ T + LAACA + ++ GK+IHAH++R + D + NAL++MY +CG ++ ++
Sbjct: 496 PNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQ 555
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN ++V SWN ++ ++ G ++LF++M + ++PD +TFI LL C+ + +V
Sbjct: 556 FNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMV 614
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
++G YF+ ME YG++P+++H+ C++DLLGRAG+L EA ++ +K P+ DP V G LL+
Sbjct: 615 RQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLN 673
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ + +GE A+ +F L + Y+LL NLYA G W +VA R+M+K++GL +
Sbjct: 674 ACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVD 733
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLK 573
S +EV+G F + H + EIN +L+
Sbjct: 734 AGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLE 766
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 134/454 (29%), Positives = 234/454 (51%), Gaps = 7/454 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+L+ C +A ++G +++ L V + N L ++ + G ++ A VF +MSER
Sbjct: 99 ALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSER 158
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISACAGIQSLVKGQQI 122
NL SW+ ++ G+ + G A+ + +M + P+ Y F + C GI L +G+++
Sbjct: 159 NLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEV 218
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H + +++GY V N+LI+MY+K G A L++ +++S+NA+I+G+ EN
Sbjct: 219 HVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMC 278
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
+G E+F M + PD + + C + D R G +H + + V N++
Sbjct: 279 HEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSL 338
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+Y EAEK F +E KD++SW T I+ + +K + ++ M D V+PD
Sbjct: 339 TQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQD-SVKPD 397
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+ T A++L+ACA L + G ++H I+ RL V V N L+NMY+KC I + +F+
Sbjct: 398 EITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFH 457
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+ +NV+SW +IIA + AL QMK T ++P+++T L AC G +
Sbjct: 458 NIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMC 516
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
G+ + +T G+ D L+D+ R G++
Sbjct: 517 GKEIHAHVLRT-GVGLDDFLPNALLDMYVRCGRM 549
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 146/307 (47%), Gaps = 2/307 (0%)
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
G N + E+ ++ M + D F + +C +G ++ + +
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
+GN +A++ +F + +A F + E++L SWN + + +++ + ++ M
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
GV+PD +TF +L C G+ + GK++H H++R D+ V NAL+ MY KCG +
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ LF+ M R+++SWN +I+ + + + L+LF M+ + PD +T +++AC
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
G + G ++ T G + DI L + AG EAE+ + +D +
Sbjct: 308 ELLGDRRLGRD-IHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMER-KDIVS 365
Query: 475 LGTLLSA 481
T++S
Sbjct: 366 WTTMISG 372
>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 783
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 183/543 (33%), Positives = 306/543 (56%), Gaps = 4/543 (0%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
++S CS ++ G +H + + D V N +++LY KC +++LAR++FD M
Sbjct: 241 LASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSME 300
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFF---SQMHLLPNEYIFASAISACAGIQSLVKGQQ 121
RNLVSW+ MI+G+ Q A+ F SQ P+ + S +++C + ++ +G+Q
Sbjct: 301 NRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQ 360
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+HA+ +K S +V N+LI MY K + ++A V+ E + +S+NA+I G+
Sbjct: 361 VHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGD 420
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
E+F M L P +F L + S +DL +H L VK + + G+
Sbjct: 421 LTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSA 480
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +YSKF+L+ +A+ F L++ +D++ WN I + E+ + +F + G+ P
Sbjct: 481 LIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVS-GLTP 539
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
++FTF +++ + LAS+ HG+Q HA +I+ + D + NAL++MYAKCG I LF
Sbjct: 540 NEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLF 599
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
L ++V+ WN++I+ +A H AL +F M+ G++P+ VTF+ +L+AC HAGLV
Sbjct: 600 ESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVTFVSVLSACAHAGLVD 659
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
EG +FNSM+ Y + P EH+ +++L GR+GKL A+E+ ++ P+ + +LLSA
Sbjct: 660 EGLHHFNSMKTKYAVEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPVATIWRSLLSA 719
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
C L +V IG + P + P VL+SN+YAS G+W D R+ + +G+ KEP
Sbjct: 720 CHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASKGLWADAQKLRQGMDCAGVVKEP 779
Query: 542 SYS 544
YS
Sbjct: 780 GYS 782
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/499 (30%), Positives = 256/499 (51%), Gaps = 33/499 (6%)
Query: 4 SISSLLHHCSKTKALQQGIS-LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
S++ LL C L++ + HA + G+ PD+ ++N +L Y+K G++ AR++FD
Sbjct: 31 SLAQLLLSCLAGDRLRRVLPPAHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDS 90
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---------PNEYIFASAISACAGI 113
M RNLVSW + IS + Q G AL F+ PNE++ ASA+ ACA
Sbjct: 91 MPSRNLVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQS 150
Query: 114 QSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALI 173
++ G+Q+H + K G + FVG +L+++Y K G A+ V+ N V++ A+I
Sbjct: 151 RAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVI 210
Query: 174 AGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE 233
G+ + Q E+F M G+ PDRF A CS + G +H + E
Sbjct: 211 TGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAE 270
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
S+ V N ++ LY K + + A + F +E ++L+SW T IA + + +S+F ++
Sbjct: 271 SDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQL 330
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
S G +PD F SIL +C LA++ G+Q+HAH+I+ L D V NAL++MYAKC
Sbjct: 331 SQ-AGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEH 389
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGG--SALKLFEQMKATGIKPDSVTFIGLL 411
++ + +F + + +S+N +I +A RLG A+++F +M+ +KP +TF+ LL
Sbjct: 390 LTEARAVFEALAEDDAISYNAMIEGYA--RLGDLTGAVEIFGKMRYCSLKPSLLTFVSLL 447
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQD 471
+ ++ + + K+ G S D+ + LID+ KF L D
Sbjct: 448 GVSSSRSDLELSKQIHGLIVKS-GTSLDLYAGSALIDVY-------------SKFSLVDD 493
Query: 472 PIVLGTLLSACRLRRDVVI 490
++ +L+ RD+VI
Sbjct: 494 AKLVFSLMQ----NRDMVI 508
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 190/550 (34%), Positives = 315/550 (57%), Gaps = 6/550 (1%)
Query: 31 MGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEF 90
MG D+++SN ++ +Y KCG++ +A VFD M +RN+VSW+A++ GH Q G L +L
Sbjct: 1 MGFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLL 60
Query: 91 FSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMK 147
FS+M L PN++ F++ + AC + L G+QIH +K G+ ++ VGNS+I MY K
Sbjct: 61 FSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSK 120
Query: 148 VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGG 207
G ++A ++ NL+S+NA+IAG+ EK +F+ M G D F+F
Sbjct: 121 CGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTST 180
Query: 208 LEICSVSNDLRKGMILHCLTVKCKL--ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK 265
L+ CS +++G +H + N V ++ LY K + A + F IEEK
Sbjct: 181 LKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEK 240
Query: 266 DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
+ISW I + + + + +F+++ + ++ D F +S++ A A VQ GKQ+
Sbjct: 241 HVISWTALILGYAQEGNLAESMELFRQL-RESSIQVDGFILSSMMGVFADFALVQQGKQM 299
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
HA I++ D+ V N++++MY KCG+I+ + +LF+EM RNV+SW +I + H LG
Sbjct: 300 HAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLG 359
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
A++LF++M+ +PD VT++ +L C+H+GLV++G+ YF+ + +GI +EH+ C
Sbjct: 360 KEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYAC 419
Query: 446 LIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTT 505
++DLLGRAG+L EA+ PL + + TLLSACR+ D+ +G+ + L L
Sbjct: 420 MVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSEN 479
Query: 506 TSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKI 565
YV++SN+YA G W + R+++K LKKE S +E+ F + +H
Sbjct: 480 PVNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLT 539
Query: 566 GEINYMLKTL 575
+I+ +LK +
Sbjct: 540 EKIHEILKEM 549
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 214/435 (49%), Gaps = 23/435 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S+ L C L G +H +K G +V N ++++Y+KCG++ A +F+ M
Sbjct: 75 TFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVM 134
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQ 120
RNL+SW+AMI+G+ AG AL F +M + +E+ F S + AC+ + ++ +G
Sbjct: 135 PVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGN 194
Query: 121 QIHAYSLKFG--YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
QIHA+ + G Y+ + V +LI +Y+K G A V+ E +++S+ ALI G+ +
Sbjct: 195 QIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQ 254
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ E+F+ + + D F + + + + +++G +H +K + V
Sbjct: 255 EGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISV 314
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N+I+ +Y K +I EAE+ F + +++ISW I ++ + +F EM D
Sbjct: 315 CNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLD-S 373
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHL-----IRMRLNQDVGVGNALVNMYAKCGL 353
PDD T+ ++L C+ V+ G++ + L I+ R+ +V++ + G
Sbjct: 374 TEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYA----CMVDLLGRAGR 429
Query: 354 ISCSYKLFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDS---VTFIG 409
+ + L + M L NV W T+++A H L+L +++ ++ DS V ++
Sbjct: 430 LKEAKNLVDSMPLEANVGIWQTLLSACRVH----GDLELGKEVGGILLRLDSENPVNYVM 485
Query: 410 LLTACNHAGLVKEGE 424
+ AG KE E
Sbjct: 486 MSNIYADAGYWKECE 500
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 191/574 (33%), Positives = 328/574 (57%), Gaps = 9/574 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVL---KMGIQPDVIVSNHVLNLYAKCGKMILARKV 59
K + +LL + K+L+ G ++HA ++ + D+ N ++NLY+KCG+ ARK+
Sbjct: 24 KEVVNLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKL 83
Query: 60 FDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISACAGIQS 115
FD M +RN+VSWSA++ G+ GE L L F + L PNEYIF +S CA
Sbjct: 84 FDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGR 143
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
+ +G+Q H Y LK G +V N+LI MY + + A+ + ++ S+N++++
Sbjct: 144 VKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSA 203
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
VE+ + +V K M+ + ++ D ++ L +C+ DL+ G+ +H +K L +
Sbjct: 204 LVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFD 263
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
FV +T++ Y K + A K F + ++++++W + A +E+ L++F +M
Sbjct: 264 VFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMEL 323
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
+ RP++FTFA +L ACA L ++ +G +H ++ + VGNAL+NMY+K G I
Sbjct: 324 E-DTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNID 382
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
SY +F+ M++R+V++WN +I +++H LG AL +F+ M + G P+ VTFIG+L+AC
Sbjct: 383 SSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACV 442
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP-LGQDPIV 474
H LV+EG YF+ + K + + P +EH+TC++ LLGRAG L EAE + K + D +
Sbjct: 443 HLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVVA 502
Query: 475 LGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKD 534
TLL+AC + R+ +G+++ + + + P Y LLSN++A W V RK++K+
Sbjct: 503 WRTLLNACHIHRNYNLGKQITETVIQMDPHDVGTYTLLSNMHAKARKWDGVVKIRKLMKE 562
Query: 535 SGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
+KKEP S ++++ F +H + +I
Sbjct: 563 RNIKKEPGASWLDIRNNTHVFVSEGSNHPESTQI 596
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 198/577 (34%), Positives = 328/577 (56%), Gaps = 8/577 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+S++L CS L+ G +HA +L+ G++ D + N +++ Y KCG++I A K+F+ M
Sbjct: 252 LSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP 311
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQ 121
+N++SW+ ++SG+ Q H A+E F+ M L P+ Y +S +++CA + +L G Q
Sbjct: 312 NKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQ 371
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE--- 178
+HAY++K + S+V NSLI MY K +DA V+ ++V FNA+I G+
Sbjct: 372 VHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGT 431
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ + +F+ M + + P +F L + L +H L K L + F
Sbjct: 432 QWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFA 491
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
G+ ++ +YS + ++ F ++ KDL+ WN+ A ++ E+ L++F E+
Sbjct: 492 GSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRE 551
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
RPD+FTFA+++ A LASVQ G++ H L++ L + + NAL++MYAKCG ++
Sbjct: 552 -RPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAH 610
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
K F+ R+VV WN++I+++ANH G AL++ E+M + GI+P+ +TF+G+L+AC+HAG
Sbjct: 611 KAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAG 670
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV++G F M + +GI P+ EH+ C++ LLGRAG+L +A E +K P IV +L
Sbjct: 671 LVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSL 729
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
LS C +V + E A+ P + + +LSN+YAS GMW + R+ +K G+
Sbjct: 730 LSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVV 789
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KEP S I + F + SH K +I +L L
Sbjct: 790 KEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDL 826
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/442 (32%), Positives = 239/442 (54%), Gaps = 25/442 (5%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG--HHQA 81
+H ++ G++ D +SN ++NLY++ G M+ ARKVF++M ERNLVSWS M+S HH
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 82 GEHLLA--LEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ----QIHAYSLKFGYASIS 135
E L LEF+ PNEYI +S I AC+G+ +G+ Q+ ++ +K G+
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--RGRWMVFQLQSFLVKSGFDRDV 183
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
+VG LI Y+K G A LV+ E + V++ +I+G V+ + ++F ++
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMED 243
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
++PD + + L CS+ L G +H ++ LE + + N ++ Y K + A
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAA 303
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
K F + K++ISW T ++ A +++ + +F MS G++PD + +SIL +CA
Sbjct: 304 HKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSK-FGLKPDMYACSSILTSCAS 362
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
L ++ G Q+HA+ I+ L D V N+L++MYAKC ++ + K+F+ +VV +N +
Sbjct: 363 LHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAM 422
Query: 376 IAAHANHRLGGS-----ALKLFEQMKATGIKPDSVTFIGLLTAC---NHAGLVKEGEAYF 427
I ++ RLG AL +F M+ I+P +TF+ LL A GL K+
Sbjct: 423 IEGYS--RLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQ----I 476
Query: 428 NSMEKTYGISPDIEHFTCLIDL 449
+ + YG++ DI + LID+
Sbjct: 477 HGLMFKYGLNLDIFAGSALIDV 498
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 245/458 (53%), Gaps = 10/458 (2%)
Query: 5 ISSLLHHCS--KTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+SS + CS + L + ++K G DV V +++ Y K G + AR VFD
Sbjct: 149 LSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDA 208
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
+ E++ V+W+ MISG + G ++L+ F Q+ +++P+ YI ++ +SAC+ + L G
Sbjct: 209 LPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGG 268
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+QIHA+ L++G + + N LI Y+K G A ++ N++S+ L++G+ +N
Sbjct: 269 KQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQN 328
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
++ E+F M + GL PD ++ + L C+ + L G +H T+K L ++ +V
Sbjct: 329 ALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVT 388
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA---DYEKGLSVFKEMSND 296
N+++ +Y+K + + +A K F + D++ +N I S + + L++F++M
Sbjct: 389 NSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRF- 447
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
+RP TF S+L A A L S+ KQIH + + LN D+ G+AL+++Y+ C +
Sbjct: 448 RLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKD 507
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
S +F+EM +++V WN++ A + AL LF +++ + +PD TF ++TA +
Sbjct: 508 SRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGN 567
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
V+ G+ + + K G+ + L+D+ + G
Sbjct: 568 LASVQLGQEFHCQLLKR-GLECNPYITNALLDMYAKCG 604
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 161/321 (50%), Gaps = 16/321 (4%)
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
R FA L++ + + L ++H + LE + ++ N ++ LYS+ + A K F
Sbjct: 44 RREFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFE 103
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ E++L+SW+T ++AC+H YE+ L VF E P+++ +S + AC+GL
Sbjct: 104 KMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG-- 161
Query: 321 HGK----QIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
G+ Q+ + L++ ++DV VG L++ Y K G I + +F+ + ++ V+W T+I
Sbjct: 162 RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMI 221
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
+ +L+LF Q+ + PD +L+AC+ ++ G+ + + YG+
Sbjct: 222 SGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR-YGL 280
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAK 496
D LID + G+++ A + P ++ I TLLS +++ + E A
Sbjct: 281 EMDASLMNVLIDSYVKCGRVIAAHKLFNGMP-NKNIISWTTLLSG--YKQNALHKE--AM 335
Query: 497 QLFHLQPTTTSPYVLLSNLYA 517
+LF T+ S + L ++YA
Sbjct: 336 ELF----TSMSKFGLKPDMYA 352
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 197/582 (33%), Positives = 318/582 (54%), Gaps = 15/582 (2%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C + +H ++K G D+ V ++N+Y+KCG M A KVFD + RN
Sbjct: 70 LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRN 129
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
+ +W+ +++G+ Q LLAL+ F +M P+ Y ++AC+ +QS+ G+Q+HA
Sbjct: 130 VNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHA 189
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
Y +K+ + +GNSL S Y K A+ + E +++S+ ++I+ +N Q +
Sbjct: 190 YLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAAR 249
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
F ML G+ P+ ++ L C V L G +H L++K S+ + N+IM
Sbjct: 250 SLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMY 309
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEK-----------GLSVFKEM 293
LY K + EA+K F +E +L++WN IA + D + L++F+++
Sbjct: 310 LYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKL 369
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
G++PD FTF+S+L+ C+ L +++ G+QIH +I+ + DV VG ALV+MY KCG
Sbjct: 370 YRS-GMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGS 428
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
I + K F EM R ++SW ++I A H L AL+LFE M+ GIKP+ VTF+G+L+A
Sbjct: 429 IDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSA 488
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C+HAGL E YF M+K Y I P ++HF CLID+ R G++ EA + K +
Sbjct: 489 CSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNET 548
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
+ L++ CR +G A+QL L+P YV L N++ S G W DV+ RK++K
Sbjct: 549 IWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMK 608
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ + K +S I ++ F + SH + E+ +L+T+
Sbjct: 609 EEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETV 650
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 164/328 (50%), Gaps = 28/328 (8%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++S+L C L G +H+ +K+G +++ N ++ LY KCG +I A+K+F+ M
Sbjct: 268 TLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGM 327
Query: 64 SERNLVSWSAMISGH-------------HQAGEHLLALEFFSQMH---LLPNEYIFASAI 107
NLV+W+AMI+GH H++G LA+ F +++ + P+ + F+S +
Sbjct: 328 ETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAM--FQKLYRSGMKPDLFTFSSVL 385
Query: 108 SACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLV 167
S C+ + +L +G+QIH +K G + VG +L+SMY K G A + E ++
Sbjct: 386 SVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMI 445
Query: 168 SFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLT 227
S+ ++I GF + ++ ++F+ M G+ P++ +F G L CS + + + L
Sbjct: 446 SWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELM 505
Query: 228 VKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIE----EKDLISWNTFIAACSHCADY 283
K + P V + L + +G E+AF ++ E + W+ IA C
Sbjct: 506 QK-QYNIKP-VMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKS 563
Query: 284 EKGLSVFKEMSNDHGVRPDDF-TFASIL 310
+ G +++ ++P D T+ S+L
Sbjct: 564 DLGFYAAEQLLK---LKPKDVETYVSLL 588
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 63/118 (53%)
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G R + + +L C + IH H+++ ++D+ V LVN+Y+KCG++ +
Sbjct: 59 GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 118
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+K+F+ + RNV +W T++ + + AL+LF +M G P + T +L AC+
Sbjct: 119 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACS 176
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 197/582 (33%), Positives = 318/582 (54%), Gaps = 15/582 (2%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C + +H ++K G D+ V ++N+Y+KCG M A KVFD + RN
Sbjct: 64 LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRN 123
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
+ +W+ +++G+ Q LLAL+ F +M P+ Y ++AC+ +QS+ G+Q+HA
Sbjct: 124 VNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHA 183
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
Y +K+ + +GNSL S Y K A+ + E +++S+ ++I+ +N Q +
Sbjct: 184 YLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAAR 243
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
F ML G+ P+ ++ L C V L G +H L++K S+ + N+IM
Sbjct: 244 SLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMY 303
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEK-----------GLSVFKEM 293
LY K + EA+K F +E +L++WN IA + D + L++F+++
Sbjct: 304 LYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKL 363
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
G++PD FTF+S+L+ C+ L +++ G+QIH +I+ + DV VG ALV+MY KCG
Sbjct: 364 YRS-GMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGS 422
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
I + K F EM R ++SW ++I A H L AL+LFE M+ GIKP+ VTF+G+L+A
Sbjct: 423 IDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSA 482
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C+HAGL E YF M+K Y I P ++HF CLID+ R G++ EA + K +
Sbjct: 483 CSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNET 542
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
+ L++ CR +G A+QL L+P YV L N++ S G W DV+ RK++K
Sbjct: 543 IWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMK 602
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ + K +S I ++ F + SH + E+ +L+T+
Sbjct: 603 EEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETV 644
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 164/328 (50%), Gaps = 28/328 (8%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++S+L C L G +H+ +K+G +++ N ++ LY KCG +I A+K+F+ M
Sbjct: 262 TLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGM 321
Query: 64 SERNLVSWSAMISGH-------------HQAGEHLLALEFFSQMH---LLPNEYIFASAI 107
NLV+W+AMI+GH H++G LA+ F +++ + P+ + F+S +
Sbjct: 322 ETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAM--FQKLYRSGMKPDLFTFSSVL 379
Query: 108 SACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLV 167
S C+ + +L +G+QIH +K G + VG +L+SMY K G A + E ++
Sbjct: 380 SVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMI 439
Query: 168 SFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLT 227
S+ ++I GF + ++ ++F+ M G+ P++ +F G L CS + + + L
Sbjct: 440 SWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELM 499
Query: 228 VKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIE----EKDLISWNTFIAACSHCADY 283
K + P V + L + +G E+AF ++ E + W+ IA C
Sbjct: 500 QK-QYNIKP-VMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKS 557
Query: 284 EKGLSVFKEMSNDHGVRPDDF-TFASIL 310
+ G +++ ++P D T+ S+L
Sbjct: 558 DLGFYAAEQLLK---LKPKDVETYVSLL 582
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 63/118 (53%)
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G R + + +L C + IH H+++ ++D+ V LVN+Y+KCG++ +
Sbjct: 53 GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 112
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+K+F+ + RNV +W T++ + + AL+LF +M G P + T +L AC+
Sbjct: 113 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACS 170
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 192/583 (32%), Positives = 329/583 (56%), Gaps = 18/583 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF-DE 62
S+ + HH K L +G +H+ +L G + ++N+Y+KC +M A +F D
Sbjct: 43 SLQASAHH----KNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDP 98
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
E N+ +++A+ISG G EF+ +M ++P+++ F AI AC + +
Sbjct: 99 THEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI--- 155
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
++IH KFG F+G++L++ Y+K G A + + E ++V +NA++ G+ +
Sbjct: 156 KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQI 215
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
Q E E F+ M + ++P RF+ G L + +V DL G I+H +K +S V
Sbjct: 216 GQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVS 275
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N+++ +Y K I +A + F ++ EKD+ SWN+ ++ C D++ L + M G+
Sbjct: 276 NSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGA-GI 334
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD------VGVGNALVNMYAKCGL 353
+PD T ++L AC+ LA++ HG++IH ++I L +D V + NA+++MYAKCG
Sbjct: 335 QPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGS 394
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ ++ +F M +++V SWN +I + H G AL++F +M +KPD VTF+G+L+A
Sbjct: 395 MRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSA 454
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C+HAG V +G + M+ Y ++P IEH+TC+ID+LGRAG+L EA E P+ +P+
Sbjct: 455 CSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPV 514
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
V LL+ACRL + V+ E A+++F L+P YVL+SN+Y + G + +V R ++
Sbjct: 515 VWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMR 574
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
++K P S IE++ F A+ +H + I L +L+
Sbjct: 575 QQNVRKTPGCSWIELKNGVHVFVSADRAHPEAHSIYAGLNSLT 617
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 180/321 (56%), Gaps = 5/321 (1%)
Query: 105 SAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGE-AFE 163
+++ A A ++L KG++IH+Y L G+ + SLI+MY K + AL ++ + E
Sbjct: 42 ASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHE 101
Query: 164 PNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMIL 223
N+ +FNA+I+GF+ N PE+GFE ++ M +G++PD+F+F ++ C +++K +
Sbjct: 102 INVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEIKK---I 158
Query: 224 HCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY 283
H L K LE + F+G+ ++ Y KF L+ A+ AF + +D++ WN + + +
Sbjct: 159 HGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQF 218
Query: 284 EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA 343
E L F+ M ND V P FT +L+ A + + +G+ IH ++M + V V N+
Sbjct: 219 EMVLETFRRM-NDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNS 277
Query: 344 LVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPD 403
L++MY KC I + ++F M +++ SWN+I++ H L+L ++M GI+PD
Sbjct: 278 LIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPD 337
Query: 404 SVTFIGLLTACNHAGLVKEGE 424
VT +L AC+H + G
Sbjct: 338 LVTVTTVLPACSHLAALMHGR 358
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 197/572 (34%), Positives = 325/572 (56%), Gaps = 7/572 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +L C L +G +H V++ G + D+ V N ++ +Y KCG + AR +FD M
Sbjct: 198 TFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRM 257
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
R+++SW+AMISG+ + G L+ F M L P+ S ISAC + G+
Sbjct: 258 PRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGR 317
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IHAY + G+A V NSL MY+ G +A ++ ++VS+ +I+G+ N
Sbjct: 318 DIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNF 377
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
PEK + +++M + + PD + A L C+ DL G+ LH L +K +L S V N
Sbjct: 378 LPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVAN 437
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +YSK I +A F I K++ISW + IA + L F++M ++
Sbjct: 438 NLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMK--MTLQ 495
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P+ T + LAACA + ++ GK+IHAH++R + D + NAL++MY +CG ++ ++
Sbjct: 496 PNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQ 555
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN ++V SWN ++ ++ G ++LF++M ++PD +TFI LL C + +V
Sbjct: 556 FNSQ-KKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMV 614
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
++G YF+ ME+ YG++P+++H+ C++DLLGRAG+L EA ++ +K P+ DP V G LL+
Sbjct: 615 RQGLMYFSKMEE-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLN 673
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ ++ +GE A+++F L + Y+LL NLYA G W +VA R+M+K++GL +
Sbjct: 674 ACRIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVD 733
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYML 572
S +EV+G F + H + EIN +L
Sbjct: 734 AGCSWVEVKGKVHAFLSDDKYHPQTKEINTVL 765
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 134/454 (29%), Positives = 235/454 (51%), Gaps = 7/454 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+L+ C +A ++G +++ L V + N L ++ + G ++ A VF +MSER
Sbjct: 99 ALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGNAFLAMFVRFGNLVDAWYVFGKMSER 158
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISACAGIQSLVKGQQI 122
NL SW+ ++ G+ + G A+ + +M + P+ Y F + C GI L +G+++
Sbjct: 159 NLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREV 218
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H + +++GY V N+LI+MY+K G A L++ +++S+NA+I+G+ EN
Sbjct: 219 HVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMG 278
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
+G ++F M + PD + + C + D R G +H + + V N++
Sbjct: 279 HEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSL 338
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+Y EAEK F ++ KD++SW T I+ + EK + ++ M D V+PD
Sbjct: 339 TQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQD-SVKPD 397
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+ T A++L+ACA L + G ++H I+ RL V V N L+NMY+KC I + +F+
Sbjct: 398 EITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFH 457
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+ +NV+SW +IIA + AL F QMK T ++P+++T L AC G +
Sbjct: 458 NIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKMT-LQPNAITLTAALAACARIGALMC 516
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
G+ + +T G+ D L+D+ R G++
Sbjct: 517 GKEIHAHVLRT-GVGLDDFLPNALLDMYVRCGRM 549
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 169/342 (49%), Gaps = 2/342 (0%)
Query: 83 EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLI 142
E + L ++ + +E +F + + C ++ +G ++++ +L + +GN+ +
Sbjct: 77 EAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGNAFL 136
Query: 143 SMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR-QGLLPDR 201
+M+++ G DA V+G+ E NL S+N L+ G+ + ++ ++ ML G+ PD
Sbjct: 137 AMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDV 196
Query: 202 FSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRL 261
++F L C DL +G +H V+ E + V N ++ +Y K + A F
Sbjct: 197 YTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDR 256
Query: 262 IEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQH 321
+ +D+ISWN I+ +GL +F M V PD T S+++AC L +
Sbjct: 257 MPRRDIISWNAMISGYFENGMGHEGLKLFFAMRG-LSVDPDLMTLTSVISACELLGDRRL 315
Query: 322 GKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN 381
G+ IHA++I D+ V N+L MY G + KLF+ M +++VSW T+I+ +
Sbjct: 316 GRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEY 375
Query: 382 HRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
+ L A+ + M +KPD +T +L+AC G + G
Sbjct: 376 NFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG 417
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 148/307 (48%), Gaps = 2/307 (0%)
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
G N + E+ ++ M + D F + +C +G ++ + +
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSL 127
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
+ +GN +A++ +F + +A F + E++L SWN + + +++ + ++ M
Sbjct: 128 SVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRML 187
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
GV+PD +TF +L C G+ + G+++H H++R D+ V NAL+ MY KCG +
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ LF+ M R+++SWN +I+ + + +G LKLF M+ + PD +T +++AC
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISAC 307
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
G + G ++ T G + DI L + AG EAE+ + +D +
Sbjct: 308 ELLGDRRLGRD-IHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDC-KDIVS 365
Query: 475 LGTLLSA 481
T++S
Sbjct: 366 WTTMISG 372
>gi|255572826|ref|XP_002527345.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533264|gb|EEF35017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 196/582 (33%), Positives = 317/582 (54%), Gaps = 15/582 (2%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C+K ++ + +HA ++K G D+ V ++N+YAKCG M ARK+FD + RN
Sbjct: 80 LLQECTKKNSVSEAQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAMGNARKIFDSLHRRN 139
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
+V+W+A+++G+ Q + +A++ F M LP+ Y A++AC+ I S+ G+Q+HA
Sbjct: 140 VVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNACSAINSIKLGKQLHA 199
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ +K+ +GN+L S+Y K+G ++ V+ E N++S+ A+I+ EN +
Sbjct: 200 FVIKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIGEKNVISWTAVISACGENGKAAM 259
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
G F ML + + P+ F+ L +C V+ L G ++H L++K + N + N+IM
Sbjct: 260 GLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKLGYQYNLRITNSIMY 319
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEK-----------GLSVFKEM 293
LY K + EA+ F + +L++WN I+ + D K LS+F E+
Sbjct: 320 LYLKCGHMDEAQILFHKMGSTNLVTWNAMISGHAQAMDLAKDDFSAQRSGIEALSIFLEL 379
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
N G +PD FT +S+L C+ L+++ G+Q+HA I+ DV VG ALVNMY+KCG
Sbjct: 380 -NRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVGTALVNMYSKCGS 438
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
I + K F EM R ++SW T+I A H AL+LFE M+ G++P+ +TF+G+L A
Sbjct: 439 IGKASKAFVEMSTRTLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQITFVGVLAA 498
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C H+G+V E YF M+K Y I P ++H+ CLI + + +L EA + K
Sbjct: 499 CCHSGMVDEALGYFEMMQKEYRIKPVMDHYGCLIAMFVKLRRLDEAFDIINKMDFEPSEF 558
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
+ L++ CR +G A+QL L+ T YV L N+Y S W DV+ RK++K
Sbjct: 559 IWSILIAGCRNLGKQELGFYAAEQLLKLKLKDTETYVTLLNMYISAKRWQDVSRVRKLMK 618
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ L K +S I ++ F H ++ +L+ L
Sbjct: 619 EEKLGKFNDWSWITIKEKIHSFKTTGRLHPHNAKMYELLEEL 660
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 157/308 (50%), Gaps = 32/308 (10%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++++L C T AL G +H+ +K+G Q ++ ++N ++ LY KCG M A+ +F +M
Sbjct: 278 TLTTVLSLCCVTLALVLGRLVHSLSIKLGYQYNLRITNSIMYLYLKCGHMDEAQILFHKM 337
Query: 64 SERNLVSWSAMISGHHQAGE-----------HLLALEFFSQMHLL---PNEYIFASAISA 109
NLV+W+AMISGH QA + + AL F +++ P+ + +S ++
Sbjct: 338 GSTNLVTWNAMISGHAQAMDLAKDDFSAQRSGIEALSIFLELNRTGKKPDLFTLSSVLTV 397
Query: 110 CAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSF 169
C+ + +L +G+Q+HA ++K GY S VG +L++MY K G A + E L+S+
Sbjct: 398 CSRLSALGQGEQLHAQTIKSGYLSDVVVGTALVNMYSKCGSIGKASKAFVEMSTRTLISW 457
Query: 170 NALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCL--- 226
+I G ++ E+ ++F+ M G+ P++ +F G L C S GM+ L
Sbjct: 458 TTMITGLAQHGHSEQALQLFEDMRLAGVRPNQITFVGVLAACCHS-----GMVDEALGYF 512
Query: 227 -TVKCKLESNPFVGN--TIMALYSKFNLIGEAEKAFRLIEEKDL----ISWNTFIAACSH 279
++ + P + + ++A++ K + E AF +I + D W+ IA C +
Sbjct: 513 EMMQKEYRIKPVMDHYGCLIAMFVKLRRLDE---AFDIINKMDFEPSEFIWSILIAGCRN 569
Query: 280 CADYEKGL 287
E G
Sbjct: 570 LGKQELGF 577
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 106/202 (52%), Gaps = 13/202 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+L CS+ AL QG LHA +K G DV+V ++N+Y+KCG + A K F EM
Sbjct: 390 TLSSVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVGTALVNMYSKCGSIGKASKAFVEM 449
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
S R L+SW+ MI+G Q G AL+ F M L PN+ F ++AC S + +
Sbjct: 450 STRTLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQITFVGVLAACC--HSGMVDE 507
Query: 121 QIHAYSLKFGYASISFVGN---SLISMYMKVGYSSDALLVYGEA-FEPNLVSFNALIAGF 176
+ + + I V + LI+M++K+ +A + + FEP+ ++ LIAG
Sbjct: 508 ALGYFEMMQKEYRIKPVMDHYGCLIAMFVKLRRLDEAFDIINKMDFEPSEFIWSILIAGC 567
Query: 177 VENQQPEKGF----EVFKLMLR 194
+ E GF ++ KL L+
Sbjct: 568 RNLGKQELGFYAAEQLLKLKLK 589
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%)
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
+ +L C SV + IHAH+I+ ++D+ V +LVN+YAKCG + + K+F+ +
Sbjct: 77 YLPLLQECTKKNSVSEAQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAMGNARKIFDSLH 136
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
RNVV+W ++ + + A+ +F+ M +G P + T L AC+ +K G+
Sbjct: 137 RRNVVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNACSAINSIKLGK 195
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 193/576 (33%), Positives = 317/576 (55%), Gaps = 10/576 (1%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
++KS SSL +++ G LH +LK G V N ++ Y K ++ ARKVF
Sbjct: 201 VSKSFSSL-------RSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVF 253
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAIS---ACAGIQSLV 117
DEM+ER+++SW+++I+G+ G L F QM E A+ +S CA + +
Sbjct: 254 DEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLIS 313
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+ +H + +K ++ N+L+ MY K G A +V+ E ++VS+ ++IAG+
Sbjct: 314 LGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYA 373
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ ++F+ M +G+ PD ++ L C+ + L +G +H + + + F
Sbjct: 374 REGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIF 433
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N +M +Y+K + EAE F + KD+ISWNT I S + LS+F + +
Sbjct: 434 VSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEK 493
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
PD+ T A +L ACA L++ G++IH +++R D V N+LV+MYAKCG + +
Sbjct: 494 RFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLA 553
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
LF+++ +++VSW +IA + H G A+ LF QM+ GI+PD ++F+ LL AC+H+
Sbjct: 554 RLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHS 613
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV EG +FN M I P +EH+ C++D+L R G L +A + + P+ D + G
Sbjct: 614 GLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGA 673
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL CR+ DV + ER+A+++F L+P T YVL++N+YA W +V RK + GL
Sbjct: 674 LLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGL 733
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLK 573
+K P S IE++G F + S+ + +I L+
Sbjct: 734 RKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFLR 769
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 230/462 (49%), Gaps = 6/462 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+++ S+L C+ +K+L+ G + + G D + + + +Y CG + A +VFD+
Sbjct: 95 RTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQ 154
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
+ + W+ +++ ++G+ ++ F +M + + Y F+ + + ++S+ G
Sbjct: 155 VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGG 214
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+H Y LK G+ + VGNSL++ Y+K A V+ E E +++S+N++I G+V N
Sbjct: 215 EQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSN 274
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
EKG VF ML G+ D + C+ S + G +HC VK
Sbjct: 275 GLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFC 334
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
NT++ +YSK + A+ FR + + ++S+ + IA + + + +F+EM + G+
Sbjct: 335 NTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEME-EEGI 393
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
PD +T ++L CA + GK++H + + D+ V NAL++MYAKCG + +
Sbjct: 394 SPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAEL 453
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG-IKPDSVTFIGLLTACNHAG 418
+F+EM ++++SWNT+I ++ + AL LF + PD T +L AC
Sbjct: 454 VFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLS 513
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
+G + + G D L+D+ + G LL A
Sbjct: 514 AFDKGREIHGYIMRN-GYFSDRHVANSLVDMYAKCGALLLAR 554
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 54/106 (50%)
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D T S+L CA S++ GK++ + D +G+ L MY CG + + ++F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVF 152
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTF 407
+++ + WN ++ A ++ LF++M ++G++ DS TF
Sbjct: 153 DQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 196/559 (35%), Positives = 334/559 (59%), Gaps = 7/559 (1%)
Query: 22 ISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQA 81
+S+HA V K+G Q D V +++ Y+ CG + AR+VFD + +++VSW+ M++ + +
Sbjct: 124 LSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAEN 183
Query: 82 GEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVG 138
H +L F QM ++ PN + ++A+ +C G+++ G+ +H +LK Y +VG
Sbjct: 184 YCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVG 243
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG-- 196
+L+ +Y K G ++A + E + +L+ ++ +I+ + ++ + ++ E+F M RQ
Sbjct: 244 IALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRM-RQSSV 302
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
++P+ F+FA L+ C+ L G +H +K L+SN FV N +M +Y+K I +
Sbjct: 303 VVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSV 362
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
K F EK+ ++WNT I D EK L++F M ++P + T++S+L A A L
Sbjct: 363 KLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLG-LDIQPTEVTYSSVLRASASL 421
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
+++ G+QIH+ I+ N+D V N+L++MYAKCG I + F++M ++ VSWN +I
Sbjct: 422 VALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALI 481
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
++ H LG AL LF+ M+ + KP+ +TF+G+L+AC++AGL+ +G A+F SM + YGI
Sbjct: 482 CGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGI 541
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAK 496
P IEH+TC++ LLGR+G+ EA + + P +V LL AC + +++ +G+ A+
Sbjct: 542 EPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQ 601
Query: 497 QLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFT 556
++ ++P + +VLLSN+YA+ W +VA RK +K +KKEP S +E QG FT
Sbjct: 602 RVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFT 661
Query: 557 VAEFSHSKIGEINYMLKTL 575
V + SH I I ML+ L
Sbjct: 662 VGDTSHPNIKLIFAMLEWL 680
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 141/479 (29%), Positives = 229/479 (47%), Gaps = 5/479 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S +++L + + G SLH +LK G D+ N +LN Y G + A K+FDEM
Sbjct: 5 SYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEM 64
Query: 64 SERNLVSWSAMISG---HHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
N VS+ + G HQ L + N+++F + + +
Sbjct: 65 PLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCL 124
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+HAY K G+ + +FVG +LI Y G A V+ + ++VS+ ++A + EN
Sbjct: 125 SVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENY 184
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E +F M G P+ F+ + L+ C+ + G +H +K + + +VG
Sbjct: 185 CHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGI 244
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ LY+K I EA++ F + + DLI W+ I+ + ++ L +F M V
Sbjct: 245 ALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVV 304
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P++FTFAS+L ACA L + G QIH+ ++++ L+ +V V NAL+++YAKCG I S KL
Sbjct: 305 PNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKL 364
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F +N V+WNTII + G AL LF M I+P VT+ +L A +
Sbjct: 365 FTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVAL 424
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
+ G + KT + D LID+ + G++ +A K QD + L+
Sbjct: 425 EPGRQIHSLTIKTM-YNKDSVVANSLIDMYAKCGRIDDARLTFDKMD-KQDEVSWNALI 481
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 140/306 (45%), Gaps = 19/306 (6%)
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
D S+A L+ + D G LHC +K + F N ++ Y F + +A K F
Sbjct: 2 DSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLF 61
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+ + +S+ T S +++ + + + G + F F ++L +
Sbjct: 62 DEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFRE-GYEVNQFVFTTLLKLLVSMDLA 120
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
+HA++ ++ D VG AL++ Y+ CG + + ++F+ + +++VSW ++A +
Sbjct: 121 DTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACY 180
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
A + +L LF QM+ G +P++ T L +CN K G++ K D
Sbjct: 181 AENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKV-CYDRD 239
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA---------------CRL 484
+ L++L ++G++ EA+++ ++ P +D ++ +L+ + CR+
Sbjct: 240 LYVGIALLELYTKSGEIAEAQQFFEEMP--KDDLIPWSLMISRYAQSDKSKEALELFCRM 297
Query: 485 RRDVVI 490
R+ V+
Sbjct: 298 RQSSVV 303
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 100/188 (53%), Gaps = 7/188 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+L + AL+ G +H+ +K D +V+N ++++YAKCG++ AR FD+M
Sbjct: 410 TYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKM 469
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+++ VSW+A+I G+ G + AL F M PN+ F +SAC+ L KG+
Sbjct: 470 DKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGR 529
Query: 121 QIHAYSLKFGYASISFVGNSLISMYM--KVGYSSDALLVYGE-AFEPNLVSFNALIAGFV 177
H S+ Y + + +++ + G +A+ + GE F+P+++ + AL+ V
Sbjct: 530 A-HFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACV 588
Query: 178 ENQQPEKG 185
++ + G
Sbjct: 589 IHKNLDLG 596
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 193/557 (34%), Positives = 306/557 (54%), Gaps = 5/557 (0%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+H V K+G V N ++ Y K G++ A K+FDE+ +R++VSW++MISG G
Sbjct: 575 IHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGF 634
Query: 84 HLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
ALEFF QM +L + ++++ACA + SL G+ +H +K ++ N+
Sbjct: 635 SHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNT 694
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
L+ MY K G +DA+ + + + +VS+ +LIA +V + +F M +G+ PD
Sbjct: 695 LLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPD 754
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+S L C+ N L KG +H K + V N +M +Y+K + EA F
Sbjct: 755 VYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFS 814
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
I KD++SWNT I S + + L +F EM + RPD T A +L AC LA+++
Sbjct: 815 QIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES--RPDGITMACLLPACGSLAALE 872
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G+ IH ++R + ++ V NAL++MY KCG + + LF+ + +++++W +I+
Sbjct: 873 IGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCG 932
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
H LG A+ F++M+ GIKPD +TF +L AC+H+GL+ EG +FNSM + P +
Sbjct: 933 MHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKL 992
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH 500
EH+ C++DLL R G L +A + P+ D + G LL CR+ DV + E++A+ +F
Sbjct: 993 EHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFE 1052
Query: 501 LQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEF 560
L+P YVLL+N+YA W +V R+ + GLKK P S IEVQG F F A+
Sbjct: 1053 LEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADT 1112
Query: 561 SHSKIGEINYMLKTLSL 577
+H + I +L L +
Sbjct: 1113 AHPQAKSIFSLLNNLRI 1129
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 139/481 (28%), Positives = 247/481 (51%), Gaps = 8/481 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE-MS 64
SS+L C++ K LQ+G +H+ + GI + ++ ++ +Y CG + R++FD +S
Sbjct: 455 SSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILS 514
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQQ 121
+ + W+ M+S + + G++ ++ F +M L N Y F+ + A + + + ++
Sbjct: 515 DNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKR 574
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
IH K G+ S + V NSLI+ Y K G A ++ E + ++VS+N++I+G V N
Sbjct: 575 IHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGF 634
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
E F ML + D + + C+ L G LH VK NT
Sbjct: 635 SHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNT 694
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +YSK + +A +AF + +K ++SW + IAA Y+ + +F EM + GV P
Sbjct: 695 LLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMES-KGVSP 753
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D ++ S+L ACA S+ G+ +H ++ + + + V NAL++MYAKCG + +Y +F
Sbjct: 754 DVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVF 813
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+++ +++VSWNT+I ++ + L ALKLF +M+ +PD +T LL AC ++
Sbjct: 814 SQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGITMACLLPACGSLAALE 872
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
G + + G S ++ LID+ + G L+ A P +D I ++S
Sbjct: 873 IGRGIHGCILRN-GYSSELHVANALIDMYVKCGSLVHARLLFDMIP-EKDLITWTVMISG 930
Query: 482 C 482
C
Sbjct: 931 C 931
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 182/378 (48%), Gaps = 4/378 (1%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
++S + CA + L +G+ +H+ G +G L+ MY+ G + ++
Sbjct: 454 YSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHIL 513
Query: 163 EPNLVS-FNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
N V +N +++ + + + +FK M + G+ + ++F+ L+ + + +
Sbjct: 514 SDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECK 573
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
+H K S V N+++A Y K + A K F + ++D++SWN+ I+ C
Sbjct: 574 RIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNG 633
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
L F +M V D T + +AACA + S+ G+ +H ++ +++V
Sbjct: 634 FSHSALEFFVQMLILR-VGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFN 692
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
N L++MY+KCG ++ + + F +M + VVSW ++IAA+ L A++LF +M++ G+
Sbjct: 693 NTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVS 752
Query: 402 PDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
PD + +L AC + +G N + K ++ + L+D+ + G + EA
Sbjct: 753 PDVYSMTSVLHACACGNSLDKGRDVHNYIRKN-NMALCLPVSNALMDMYAKCGSMEEAYL 811
Query: 462 YTKKFPLGQDPIVLGTLL 479
+ P+ +D + T++
Sbjct: 812 VFSQIPV-KDIVSWNTMI 828
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 153/315 (48%), Gaps = 13/315 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S++S+LH C+ +L +G +H + K + + VSN ++++YAKCG M A VF ++
Sbjct: 757 SMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQI 816
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL--LPNEYIFASAISACAGIQSLVKGQQ 121
+++VSW+ MI G+ + AL+ F++M P+ A + AC + +L G+
Sbjct: 817 PVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKESRPDGITMACLLPACGSLAALEIGRG 876
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
IH L+ GY+S V N+LI MY+K G A L++ E +L+++ +I+G +
Sbjct: 877 IHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGL 936
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVGN 240
+ F+ M G+ PD +F L CS S L +G + + +C +E
Sbjct: 937 GNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYA 996
Query: 241 TIMALYSKFNLIGEAEKAFRLIE----EKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
++ L ++ G KA+ LIE + D W + C D E V + +
Sbjct: 997 CMVDLLAR---TGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFE- 1052
Query: 297 HGVRPDDFTFASILA 311
+ PD+ + +LA
Sbjct: 1053 --LEPDNAGYYVLLA 1065
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 203/579 (35%), Positives = 320/579 (55%), Gaps = 37/579 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+SS+++ C+ + +G +H ++K+G D +N ++++YAK G + A VF+++
Sbjct: 260 SLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKI 319
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
+ ++VSW+A+I+G H ALE QM +Q+H
Sbjct: 320 KQPDIVSWNAVIAGCVLHEHHEQALELLGQMK------------------------RQLH 355
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ +K S FV L+ MY K DA + + E +L+++NA+I+G+ + +
Sbjct: 356 SSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDM 415
Query: 184 KGFEVFKLMLRQGL------LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ +F M ++G+ L GL++ V + H L+VK S+ +
Sbjct: 416 EALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQV------HGLSVKSGFHSDIY 469
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N+++ Y K + + +AE+ F DL+S+ + I A + E+ L +F EM D
Sbjct: 470 VVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEM-QDM 528
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
++PD F +S+L ACA L++ + GKQ+H H+++ D+ GN+LVNMYAKCG I +
Sbjct: 529 ELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDA 588
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+ F+E+ R +VSW+ +I A H G AL+LF QM G+ P+ +T + +L ACNHA
Sbjct: 589 GRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHA 648
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV E + YF SME+ +G P EH+ C+IDLLGRAGK+ EA E K P + V G
Sbjct: 649 GLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGA 708
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL A R+ +DV +G R A+ LF L+P + +VLL+N+YAS G W +VA R++++DS +
Sbjct: 709 LLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKV 768
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
KKEP S IEV+ F V + SH + EI L LS
Sbjct: 769 KKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELS 807
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 148/482 (30%), Positives = 248/482 (51%), Gaps = 35/482 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S S LL C TK+L+ G+ +HA + K G+ D + NH++NLY+KC ARK+ DE
Sbjct: 58 SYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDES 117
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQ 120
SE +LVSWSA+ISG+ Q G AL F +MHLL NE+ F+S + AC+ ++ L G+
Sbjct: 118 SEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGK 177
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H + G+ FV N+L+ MY K D+ ++ E E N+VS+NAL + +V+
Sbjct: 178 QVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXD 237
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ +F M+ G+ P+ FS + + C+ D +G I+H +K + +PF N
Sbjct: 238 FCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSAN 297
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y+K + +A F I++ D++SWN IA C +E+ L + +M
Sbjct: 298 ALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMK------ 351
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+Q+H+ L++M + D+ V LV+MY+KC L+ +
Sbjct: 352 ----------------------RQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMA 389
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL- 419
FN + +++++WN II+ ++ + AL LF +M GI + T +L + AGL
Sbjct: 390 FNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKST--AGLQ 447
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V + + G DI LID G+ + +AE ++ +G D + +++
Sbjct: 448 VVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIG-DLVSFTSMI 506
Query: 480 SA 481
+A
Sbjct: 507 TA 508
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 180/349 (51%), Gaps = 9/349 (2%)
Query: 88 LEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMK 147
L + + P ++ +S C +SL G QIHA+ K G + + N LI++Y K
Sbjct: 44 LNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSK 103
Query: 148 VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGG 207
A + E+ EP+LVS++ALI+G+ +N F M G+ + F+F+
Sbjct: 104 CRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSV 163
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDL 267
L+ CS+ DLR G +H + V E + FV NT++ +Y+K + ++++ F I E+++
Sbjct: 164 LKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNV 223
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHA 327
+SWN + + + +F EM G++P++F+ +S++ AC GL GK IH
Sbjct: 224 VSWNALFSCYVQXDFCGEAVGLFYEMVLS-GIKPNEFSLSSMVNACTGLRDSSRGKIIHG 282
Query: 328 HLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGS 387
+LI++ + D NALV+MYAK G ++ + +F ++ ++VSWN +IA H
Sbjct: 283 YLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQ 342
Query: 388 ALKLFEQMK--------ATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
AL+L QMK ++ D +GL+ + L+++ FN
Sbjct: 343 ALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFN 391
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 150/321 (46%), Gaps = 9/321 (2%)
Query: 164 PNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMIL 223
P L+ + F E+ Q + L+ + P S++ L C + LR G+ +
Sbjct: 25 PKLIQ---TVPQFSEDPQTTA---ILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQI 78
Query: 224 HCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY 283
H K L +P + N ++ LYSK G A K E DL+SW+ I+ +
Sbjct: 79 HAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLG 138
Query: 284 EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA 343
L F EM + GV+ ++FTF+S+L AC+ + ++ GKQ+H ++ DV V N
Sbjct: 139 GGALMAFHEM-HLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANT 197
Query: 344 LVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPD 403
LV MYAKC S +LF+E+ RNVVSWN + + + G A+ LF +M +GIKP+
Sbjct: 198 LVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPN 257
Query: 404 SVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYT 463
+ ++ AC G+ + K G D L+D+ + G L +A
Sbjct: 258 EFSLSSMVNACTGLRDSSRGKIIHGYLIKL-GYDWDPFSANALVDMYAKVGDLADAISVF 316
Query: 464 KKFPLGQDPIVLGTLLSACRL 484
+K D + +++ C L
Sbjct: 317 EKIK-QPDIVSWNAVIAGCVL 336
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 187/555 (33%), Positives = 319/555 (57%), Gaps = 13/555 (2%)
Query: 12 CSKTKALQQGISLHAAVL---KMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
C+ K L G ++HA L + + N +++LY KCG++ LAR +FD M RN+
Sbjct: 22 CADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNV 81
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISACAGIQSLVKGQQIHA 124
VSW+ +++G+ G HL L F M L PNEY+F +A+SAC+ + +G Q H
Sbjct: 82 VSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHG 141
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVY----GEAFEPNLVSFNALIAGFVENQ 180
KFG +V ++L+ MY + + AL V GE ++ S+N+++ VE+
Sbjct: 142 LLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVN-DIFSYNSVLNALVESG 200
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ E+ EV + M+ + + D ++ G + +C+ DL+ G+ +H ++ L + FVG+
Sbjct: 201 RGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGS 260
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y K + A F ++ ++++ W + A +E+ L++F M + G
Sbjct: 261 MLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDRE-GTL 319
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P+++TFA +L ACAG+A+++HG +HA + ++ V V NAL+NMY+K G I SY +
Sbjct: 320 PNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNV 379
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F +M++R++++WN +I +++H LG AL++F+ M + P+ VTFIG+L+A +H GLV
Sbjct: 380 FTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLV 439
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
KEG Y N + + + I P +EH+TC++ LL RAG L EAE + K + D + TLL+
Sbjct: 440 KEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLN 499
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC + R+ +G R+A+ + + P Y LLSN+YA W V RK++++ +KKE
Sbjct: 500 ACHVHRNYDLGRRIAESVLQMDPHDVGTYTLLSNMYAKARRWDGVVTIRKLMRERNIKKE 559
Query: 541 PSYSMIEVQGTFEKF 555
P S ++++ F
Sbjct: 560 PGASWLDIRNDIHVF 574
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 195/557 (35%), Positives = 299/557 (53%), Gaps = 6/557 (1%)
Query: 24 LHAAVLKM-GIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
+HA K+ +V VS +LN+Y K G + A+ VFDEM RN VSW+AM++G+
Sbjct: 139 VHALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARK 198
Query: 83 EHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVG 138
A E F QM L NE++ + +SA + L G Q+H +K G V
Sbjct: 199 CSQEAFELFRQMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVE 258
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL 198
NSL++MY K G A V+ + E N ++++A+I G+ +N E +F M G
Sbjct: 259 NSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFP 318
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKA 258
P F+ G L CS L +G H L VK E +V + ++ +Y+K IG+A++
Sbjct: 319 PTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKEC 378
Query: 259 FRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
F E D++ W + ++E+ L ++ M + GV P+ T S+L ACAGLA+
Sbjct: 379 FNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKE-GVFPNTLTITSLLRACAGLAA 437
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA 378
++ GKQ+H +++ VG+AL MY+KCG + +F M HR+V++WN+II+
Sbjct: 438 LEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISG 497
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISP 438
+ + G A+ LFE+MK G PD VTFI +L AC+H GLV G YF SM K YG++P
Sbjct: 498 FSQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTP 557
Query: 439 DIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQL 498
++H+ C++D+L RAG L EA+++ + + + +L ACR RD +G ++L
Sbjct: 558 RLDHYACMVDILSRAGMLSEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEKL 617
Query: 499 FHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVA 558
L ++ Y+LLSN+YA+ W DV R ++K G+ K+P S +E+ F V
Sbjct: 618 MDLGTGDSAAYILLSNIYAAQRKWNDVERVRYLMKLVGVSKDPGCSWVELNSRVHVFVVG 677
Query: 559 EFSHSKIGEINYMLKTL 575
E H IN L+ L
Sbjct: 678 EQQHPDAEIINTELRRL 694
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 138/489 (28%), Positives = 243/489 (49%), Gaps = 18/489 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMIL--ARKVFD 61
S + + H + + G +LHA LK G VSN ++ Y+ ++ L A VF
Sbjct: 14 SHTQFIEHLRRASRPRDGEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFA 73
Query: 62 EM--SERNLVSWSAMIS--GHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGI 113
++ + R++ SW+++++ HH+ L AL F M +LP+ + FA+A +A A
Sbjct: 74 DIPAAARDVASWNSLLNPLSHHRP---LAALSHFRSMLSSSTILPSPHSFAAAFTAAARA 130
Query: 114 QSLVKGQQIHAYSLKFGYASIS-FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
S G +HA + K AS + FV +L++MY K+G DA LV+ E N VS+ A+
Sbjct: 131 HSASAGAVVHALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAM 190
Query: 173 IAGFVENQQPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK 231
+AG+ + ++ FE+F+ ML + L + F L SV L G+ +H L VK
Sbjct: 191 VAGYAARKCSQEAFELFRQMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDG 250
Query: 232 LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK 291
+ V N+++ +Y+K + A F +E++ I+W+ I S + E + +F
Sbjct: 251 MVGFVSVENSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFS 310
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
+M + G P +FT +L AC+ + ++ GKQ H ++++ V V +ALV+MYAKC
Sbjct: 311 QM-HAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKC 369
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
G I + + FN+ ++V W ++ H + AL L+ +M G+ P+++T LL
Sbjct: 370 GCIGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLL 429
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQD 471
AC ++ G+ + K +G + L + + G L + ++ P +D
Sbjct: 430 RACAGLAALEPGKQLHTQILK-FGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMP-HRD 487
Query: 472 PIVLGTLLS 480
I +++S
Sbjct: 488 VIAWNSIIS 496
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 200/603 (33%), Positives = 326/603 (54%), Gaps = 36/603 (5%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L C+K A +GI +H +V+KMG++ DV + N +++ YA+CG M KVF+ MSERN
Sbjct: 137 VLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERN 196
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
+VSW+++I G+ + A+ F +M + P+ ISACA ++ L G+++ A
Sbjct: 197 VVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCA 256
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
Y + G + N+L+ MYMK G A ++ E + NLV +N +++ + +
Sbjct: 257 YIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLARE 316
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
+ ML+QG PDR + + + DL G + H ++ LE +GN I+
Sbjct: 317 ALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIID 376
Query: 245 LYSK----------FNLI------------------GEAEKA---FRLIEEKDLISWNTF 273
+Y K F+L+ G+ E A F I E++ + WNT
Sbjct: 377 MYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTM 436
Query: 274 IAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR 333
I+ + +E + +F+EM + G++ D T I +AC L + + K +H ++ +
Sbjct: 437 ISGLVQKSLFEDAIELFREMQGE-GIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNG 495
Query: 334 LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFE 393
+ D+ + ALV+M+A+CG + ++FN+M R+V +W I A G A LF
Sbjct: 496 IPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFN 555
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 453
QM G+KPD V F+ +LTAC+H G V++G F+ ME +GISP IEH+ C++DLLGRA
Sbjct: 556 QMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMED-HGISPQIEHYGCMVDLLGRA 614
Query: 454 GKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLS 513
G L EA + K P+ + +V G+LL+ACR+ ++V + A+++ L P +VLLS
Sbjct: 615 GLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLS 674
Query: 514 NLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLK 573
N+YAS G W DVA R L++ G++K P S ++V G +FT + SH ++ I ML+
Sbjct: 675 NIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQ 734
Query: 574 TLS 576
++
Sbjct: 735 EMN 737
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 130/486 (26%), Positives = 220/486 (45%), Gaps = 46/486 (9%)
Query: 11 HCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGK---MILARKVF-----DE 62
C KT L Q LH + K G+ ++N A+ + ARK F D
Sbjct: 33 RCCKT--LNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDV 90
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKG 119
S+ L +++I G+ AG A+ + +M +L PN Y F +S C I + +G
Sbjct: 91 RSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEG 150
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
Q+H +K G F+ N LI Y + G+ V+ E N+VS+ +LI G+
Sbjct: 151 IQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARG 210
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+P++ +F M+ G+ P + + C+ DL G + + L+ N +
Sbjct: 211 DRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMV 270
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N ++ +Y K I A++ F +++L+ +NT ++ + + L++ EM G
Sbjct: 271 NALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQ-QGP 329
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL------ 353
RPD T S ++A A L + +GK H ++IR L +GN +++MY KCG
Sbjct: 330 RPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACR 389
Query: 354 -------------------------ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
+ ++++FN++ RN V WNT+I+ L A
Sbjct: 390 VFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDA 449
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID 448
++LF +M+ GIK D VT +G+ +AC + G + + +EK GI D+ T L+D
Sbjct: 450 IELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKN-GIPCDMRLNTALVD 508
Query: 449 LLGRAG 454
+ R G
Sbjct: 509 MFARCG 514
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 18/218 (8%)
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE------KAFRL 261
L C N L++ LHC K L+ P +T+ L + I E KAF L
Sbjct: 32 LRCCKTLNQLKQ---LHCQITKNGLDQIP---STLTKLVNAGAEIASPESLDYARKAFEL 85
Query: 262 IEEK-----DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
+E L N+ I S + + ++ M GV P+ +TF +L+ C +
Sbjct: 86 FKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLV-LGVTPNHYTFPFVLSGCTKI 144
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
A+ G Q+H +++M L +DV + N L++ YA+CG + +K+F M RNVVSW ++I
Sbjct: 145 AAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLI 204
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+A A+ LF +M GI+P SVT + +++AC
Sbjct: 205 CGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISAC 242
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 192/583 (32%), Positives = 329/583 (56%), Gaps = 18/583 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF-DE 62
S+ + HH K L +G +H+ +L G + ++N+Y+KC +M A +F D
Sbjct: 43 SLQASAHH----KNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDP 98
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
E N+ +++A+ISG G EF+ +M ++P+++ F AI AC + +
Sbjct: 99 THEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI--- 155
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
++IH KFG F+G++L++ Y+K G A + + E ++V +NA++ G+ +
Sbjct: 156 KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQI 215
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
Q E E F+ M + ++P RF+ G L + +V DL G I+H +K +S V
Sbjct: 216 GQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVS 275
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N+++ +Y K I +A + F ++ EKD+ SWN+ ++ C D++ L + M G+
Sbjct: 276 NSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGA-GI 334
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD------VGVGNALVNMYAKCGL 353
+PD T ++L AC+ LA++ HG++IH ++I L +D V + NA+++MYAKCG
Sbjct: 335 QPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGS 394
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ ++ +F M +++V SWN +I + H G AL++F +M +KPD VTF+G+L+A
Sbjct: 395 MRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSA 454
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C+HAG V +G + M+ Y ++P IEH+TC+ID+LGRAG+L EA E P+ +P+
Sbjct: 455 CSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPV 514
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
V LL+ACRL + V+ E A+++F L+P YVL+SN+Y + G + +V R ++
Sbjct: 515 VWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMR 574
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
++K P S IE++ F A+ +H + I L +L+
Sbjct: 575 QQNVRKTPGCSWIELKNGVHVFVSADRAHPEAHSIYAGLNSLT 617
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 180/321 (56%), Gaps = 5/321 (1%)
Query: 105 SAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGE-AFE 163
+++ A A ++L KG++IH+Y L G+ + SLI+MY K + AL ++ + E
Sbjct: 42 ASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHE 101
Query: 164 PNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMIL 223
N+ +FNA+I+GF+ N PE+GFE ++ M +G++PD+F+F ++ C +++K +
Sbjct: 102 INVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEIKK---I 158
Query: 224 HCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY 283
H L K LE + F+G+ ++ Y KF L+ A+ AF + +D++ WN + + +
Sbjct: 159 HGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQF 218
Query: 284 EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA 343
E L F+ M ND V P FT +L+ A + + +G+ IH ++M + V V N+
Sbjct: 219 EMVLETFRRM-NDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNS 277
Query: 344 LVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPD 403
L++MY KC I + ++F M +++ SWN+I++ H L+L ++M GI+PD
Sbjct: 278 LIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPD 337
Query: 404 SVTFIGLLTACNHAGLVKEGE 424
VT +L AC+H + G
Sbjct: 338 LVTVTTVLPACSHLAALMHGR 358
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 194/556 (34%), Positives = 303/556 (54%), Gaps = 4/556 (0%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
SLH +K G+ V V N +L+ Y K G + AR+VF EM +++ V+++AM+ G + G
Sbjct: 156 SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEG 215
Query: 83 EHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
H AL+ F+ M + + F+S ++ AG+ L+ G Q+HA L+ FV N
Sbjct: 216 LHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNN 275
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
SL+ Y K D ++ E E + VS+N +IA + NQ +F+ M + G
Sbjct: 276 SLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDR 335
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
+A L + D+ G +H V L S +GN ++ +YSK ++ A+ F
Sbjct: 336 QVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNF 395
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
EK ISW I +E+ L +F +M G+RPD TF+SI+ A + LA +
Sbjct: 396 SNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRA-GLRPDRATFSSIIKASSSLAMI 454
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
G+Q+H++LIR V G+ LV+MYAKCG + + + F+EM RN +SWN +I+A+
Sbjct: 455 GLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAY 514
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
A++ +A+K+FE M G PDSVTF+ +L AC+H GL E YF+ M+ Y ISP
Sbjct: 515 AHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPW 574
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLF 499
EH+ C+ID LGR G + ++ + P DPI+ ++L +CR+ + + A +LF
Sbjct: 575 KEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLF 634
Query: 500 HLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAE 559
++PT +PYV+LSN+YA G W D A +K+++D G++KE YS +E++ F +
Sbjct: 635 GMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASND 694
Query: 560 FSHSKIGEINYMLKTL 575
+ I EI L L
Sbjct: 695 LTSPMIDEIKDELDRL 710
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 213/435 (48%), Gaps = 20/435 (4%)
Query: 41 NHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLL 97
N +L+ Y+ G + A+ +F RN +W+ M+ H AG AL F M ++
Sbjct: 78 NLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVI 137
Query: 98 PNEYIFASAIS--ACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL 155
P+ + ++ C + SL H +++KFG + FV N+L+ Y K G + A
Sbjct: 138 PDRVTVTTVLNLPGCT-VPSL------HPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAAR 190
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN 215
V+ E + + V++NA++ G + + ++F M R G+ F+F+ L + +
Sbjct: 191 RVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMA 250
Query: 216 DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIA 275
L G +H L ++ N FV N+++ YSK + + + + F + E+D +S+N IA
Sbjct: 251 HLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIA 310
Query: 276 ACSHCADYEKGLSVFKEMSN---DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
A + L +F+EM D V P +A++L+ L V GKQIHA L+ +
Sbjct: 311 AYAWNQCAATVLRLFREMQKLGFDRQVLP----YATMLSVAGSLPDVHIGKQIHAQLVLL 366
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
L + +GNAL++MY+KCG++ + F+ ++ +SW +I + + AL+LF
Sbjct: 367 GLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLF 426
Query: 393 EQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
M+ G++PD TF ++ A + ++ G + + ++ G + + L+D+ +
Sbjct: 427 SDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRS-GYKSSVFSGSVLVDMYAK 485
Query: 453 AGKLLEAEEYTKKFP 467
G L EA + P
Sbjct: 486 CGCLDEALRTFDEMP 500
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 204/412 (49%), Gaps = 19/412 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+L + L G +HA VL+ +V V+N +L+ Y+KC + R++FDEM
Sbjct: 238 TFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEM 297
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM-------HLLPNEYIFASAISACAGIQSL 116
ER+ VS++ +I+ + L F +M +LP +A+ +S + +
Sbjct: 298 PERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLP----YATMLSVAGSLPDV 353
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G+QIHA + G AS +GN+LI MY K G A + E + +S+ ALI G+
Sbjct: 354 HIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGY 413
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
V+N Q E+ ++F M R GL PDR +F+ ++ S + G LH ++ +S+
Sbjct: 414 VQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSV 473
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
F G+ ++ +Y+K + EA + F + E++ ISWN I+A +H + + + +F+ M +
Sbjct: 474 FSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLH- 532
Query: 297 HGVRPDDFTFASILAACA--GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
G PD TF S+LAAC+ GLA + K H + ++ +++ + G
Sbjct: 533 CGFNPDSVTFLSVLAACSHNGLAD-ECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCF 591
Query: 355 SCSYKLFNEMLHR-NVVSWNTIIAA---HANHRLGGSALKLFEQMKATGIKP 402
S K+ EM + + + W +I+ + H N L A M+ T P
Sbjct: 592 SQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATP 643
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
N F N I++ YS + A+ F ++ +W + A + LS+F+ M
Sbjct: 73 NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML 132
Query: 295 NDHGVRPDDFTFASI--LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
+ GV PD T ++ L C +H I+ L+ V V N L++ Y K G
Sbjct: 133 GE-GVIPDRVTVTTVLNLPGCT-------VPSLHPFAIKFGLDTHVFVCNTLLDAYCKHG 184
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
L++ + ++F EM ++ V++N ++ + L AL+LF M+ GI TF +LT
Sbjct: 185 LLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILT 244
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 326 HAHLIRMRLNQ----DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN 381
H H R +Q ++ N +++ Y+ G + + LF HRN +W ++ AHA
Sbjct: 58 HLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAA 117
Query: 382 HRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
AL LF M G+ PD VT +L
Sbjct: 118 AGRTSDALSLFRAMLGEGVIPDRVTVTTVL 147
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 195/574 (33%), Positives = 323/574 (56%), Gaps = 13/574 (2%)
Query: 12 CSKTKALQQGISLHAAVLKMGI-QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVS 70
CS +K L+QG LHA +L+ + + D+I+ ++ +YA+C + LARK FDEM ++ LV+
Sbjct: 68 CSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVT 127
Query: 71 WSAMISGHHQAGEHLLALEFFSQM------HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
W+A+I+G+ + G+H AL+ + M + P+ F+SA+ AC+ + + +G++I A
Sbjct: 128 WNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEA 187
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
++ GYAS S V N+LI+MY K G A V+ +++++N +I+G+ + +
Sbjct: 188 RTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQ 247
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
E+F+ M P+ +F G L C+ DL +G +H + ES+ +GN ++
Sbjct: 248 ALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLN 307
Query: 245 LYSKFNL-IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K + + EA + F + +D+I+WN I A + L +FK+M ++ V P++
Sbjct: 308 MYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLEN-VAPNE 366
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T +++L+ACA L + + GK +HA + R DV + N+L+NMY +CG + + +F
Sbjct: 367 ITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAA 426
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
+ +++VSW+T+IAA+A H + L+ F ++ G+ D VT + L+AC+H G++KEG
Sbjct: 427 IRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEG 486
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
F SM +G++PD HF C++DLL RAG+L AE P D + +LLS C+
Sbjct: 487 VQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCK 546
Query: 484 LRRDVVIGERLAKQLFHLQPTTT-SPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
L D R+A +LF L+ S LLSN+YA G W DV RK +K P
Sbjct: 547 LHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDV---RKTRNRRAARKNPG 603
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
S IE+ T +F + SH + I +K LS
Sbjct: 604 CSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLS 637
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 215/420 (51%), Gaps = 12/420 (2%)
Query: 46 LYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYI 102
+Y KCG + A VF + N VSW+ +++ + G + AL ++ +M L P+ +
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFV-GNSLISMYMKVGYSSDALLVYGEA 161
F AI C+ + L +GQ +HA L+ + G +LI+MY + A + E
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR---QGLLPDRFSFAGGLEICSVSNDLR 218
+ LV++NALIAG+ N ++++ M+ +G+ PD +F+ L CSV D+
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
+G + TV S+ V N ++ +YSK + A K F ++ +D+I+WNT I+ +
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 279 HCADYEKGLSVFKEMS-NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD 337
+ L +F+ M ND +P+ TF +L AC L ++ G+ IH + D
Sbjct: 241 KQGAATQALELFQRMGPND--PKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESD 298
Query: 338 VGVGNALVNMYAKC-GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
+ +GN L+NMY KC + + ++F + R+V++WN +I A+ + AL +F+QM+
Sbjct: 299 LVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQ 358
Query: 397 ATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+ P+ +T +L+AC G ++G+A +++ + D+ L+++ R G L
Sbjct: 359 LENVAPNEITLSNVLSACAVLGAKRQGKA-VHALIASGRCKADVVLENSLMNMYNRCGSL 417
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 185/341 (54%), Gaps = 4/341 (1%)
Query: 144 MYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFS 203
MY K G +DAL V+ PN VS+ ++A F N + ++ M+ +GL PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 204 FAGGLEICSVSNDLRKGMILHCLTVKCK-LESNPFVGNTIMALYSKFNLIGEAEKAFRLI 262
F + +CS S DL++G +LH + ++ + LE + +G ++ +Y++ + A K F +
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 263 EEKDLISWNTFIAACSHCADYEKGLSVFKEM--SNDHGVRPDDFTFASILAACAGLASVQ 320
+K L++WN IA S D+ L ++++M + G++PD TF+S L AC+ + +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G++I A + D V NAL+NMY+KCG + + K+F+ + +R+V++WNT+I+ +A
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
AL+LF++M KP+ VTFIGLLTAC + +++G A + K +G D+
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKV-KEHGYESDL 299
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
L+++ + LE + +D I L+ A
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVA 340
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 205/402 (50%), Gaps = 11/402 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + SS L+ CS + QG + A + G D IV N ++N+Y+KCG + ARKVFD
Sbjct: 163 AITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFD 222
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
+ R++++W+ MISG+ + G ALE F +M PN F ++AC ++ L +
Sbjct: 223 RLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQ 282
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYS-SDALLVYGEAFEPNLVSFNALIAGFV 177
G+ IH + GY S +GN L++MY K S +A V+ +++++N LI +V
Sbjct: 283 GRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYV 342
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ Q + ++FK M + + P+ + + L C+V R+G +H L + +++
Sbjct: 343 QYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVV 402
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+ N++M +Y++ + + F I +K L+SW+T IAA + GL F E+ +
Sbjct: 403 LENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQE- 461
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLI-RMRLNQDVGVGNALVNMYAKCGLISC 356
G+ DD T S L+AC+ ++ G Q ++ L D +V++ ++ G +
Sbjct: 462 GLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEA 521
Query: 357 SYKLFNEM-LHRNVVSWNTIIAAHANH----RLGGSALKLFE 393
+ L ++M + V+W ++++ H R A KLFE
Sbjct: 522 AENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFE 563
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 201/581 (34%), Positives = 333/581 (57%), Gaps = 10/581 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKC-GKMILARKVFDEM 63
+ + CS + + G + +LK G + DV V +++++ K G + A KVFD M
Sbjct: 46 TGVFRACSNKENISLGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRM 105
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+RN+V+W+ MI+ Q G A++ F M L +P+ + + +SACA + L G+
Sbjct: 106 PDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGR 165
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKV---GYSSDALLVYGEAFEPNLVSFNALIAGFV 177
Q H +K G VG SL+ MY K G DA V+ N++S+ A+I G+V
Sbjct: 166 QFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYV 225
Query: 178 ENQQPEK-GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
++ ++ E+F M++ + P+ F+F+ L+ C+ +D+ G ++ L VK +L S
Sbjct: 226 QSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASIN 285
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
VGN+++++YS+ + A KAF ++ EK+L+S+NT + A + + E+ +F E+
Sbjct: 286 CVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEG- 344
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
G + FTFAS+L+ + + ++ G+QIH+ +++ ++ + NAL++MY++CG I
Sbjct: 345 AGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEA 404
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
++++FNEM NV+SW ++I A H AL+ F +M G+ P+ VT+I +L+AC+H
Sbjct: 405 AFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSH 464
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
GL+ EG +F SM+ +GI P +EH+ C++DLLGR+G L EA E P D +VL
Sbjct: 465 VGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLR 524
Query: 477 TLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSG 536
T L ACR+ ++ +G+ A+ + P + Y+LLSNL+AS G W +VA RK +K+
Sbjct: 525 TFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERN 584
Query: 537 LKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
L KE S IEV+ KF V + SH + EI L L+L
Sbjct: 585 LTKEAGCSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLAL 625
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 212/402 (52%), Gaps = 11/402 (2%)
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
++R+LVSWSA+IS + + A+ F M PNEY F AC+ +++ G+
Sbjct: 3 NKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGK 62
Query: 121 QIHAYSLKFGY-ASISFVGNSLISMYMK-VGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
I + LK GY S VG +LI M++K G A V+ + N+V++ +I F +
Sbjct: 63 IIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQ 122
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
++F M+ G +PDRF+ +G + C+ L G HCL +K L+ + V
Sbjct: 123 LGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCV 182
Query: 239 GNTIMALYSKF---NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEK-GLSVFKEMS 294
G +++ +Y+K + +A K F + +++SW I ++ + +F EM
Sbjct: 183 GCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMV 242
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
V+P+ FTF+S+L ACA L+ + G+Q++A +++MRL VGN+L++MY++CG +
Sbjct: 243 QGQ-VKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNM 301
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ K F+ + +N+VS+NTI+ A+A A +LF +++ G ++ TF LL+
Sbjct: 302 ENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGA 361
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+ G + +GE + + K+ G ++ LI + R G +
Sbjct: 362 SSIGAIGKGEQIHSRILKS-GFKSNLHICNALISMYSRCGNI 402
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/404 (30%), Positives = 214/404 (52%), Gaps = 21/404 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKC---GKMILARKVF 60
++S ++ C++ L G H V+K G+ DV V ++++YAKC G + ARKVF
Sbjct: 147 TLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVF 206
Query: 61 DEMSERNLVSWSAMISGHHQAGE-HLLALEFFSQM---HLLPNEYIFASAISACAGIQSL 116
D M N++SW+A+I+G+ Q+G A+E F +M + PN + F+S + ACA + +
Sbjct: 207 DRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDI 266
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G+Q++A +K ASI+ VGNSLISMY + G +A + FE NLVS+N ++ +
Sbjct: 267 WLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAY 326
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
++ E+ FE+F + G + F+FA L S + KG +H +K +SN
Sbjct: 327 AKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNL 386
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
+ N ++++YS+ I A + F + + ++ISW + I + + L F +M +
Sbjct: 387 HICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKML-E 445
Query: 297 HGVRPDDFTFASILAACA--GLAS--VQHGKQIHA-HLIRMRLNQDVGVGNALVNMYAKC 351
GV P++ T+ ++L+AC+ GL S ++H K + H I R+ V V++ +
Sbjct: 446 AGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACV----VDLLGRS 501
Query: 352 GLISCSYKLFNEMLHR-NVVSWNTIIAA---HANHRLGGSALKL 391
G + + +L N M + + + T + A H N LG A ++
Sbjct: 502 GHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEM 545
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 80/130 (61%), Gaps = 4/130 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +SLL S A+ +G +H+ +LK G + ++ + N ++++Y++CG + A +VF+
Sbjct: 351 AFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFN 410
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
EM + N++SW++MI+G + G ALE F +M + PNE + + +SAC+ + + +
Sbjct: 411 EMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISE 470
Query: 119 GQQIHAYSLK 128
G + H S+K
Sbjct: 471 GLK-HFKSMK 479
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%)
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
R++VSW+ +I+ +AN+ A+ F M G P+ F G+ AC++ + G+
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
F + KT D+ LID+ + LE+
Sbjct: 65 FGFLLKTGYFESDVCVGCALIDMFVKGNGDLES 97
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 195/574 (33%), Positives = 322/574 (56%), Gaps = 13/574 (2%)
Query: 12 CSKTKALQQGISLHAAVLKMGI-QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVS 70
CS +K L+QG LHA +L+ + + D+I+ ++ +YA+C + LARK FDEM ++ LV+
Sbjct: 68 CSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVT 127
Query: 71 WSAMISGHHQAGEHLLALEFFSQM------HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
W+A+I+G+ + G+H AL+ + M + P+ F+SA+ AC + + +G++I A
Sbjct: 128 WNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEA 187
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
++ GYAS S V N+LI+MY K G A V+ +++++N +I+G+ + +
Sbjct: 188 RTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQ 247
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
E+F+ M P+ +F G L C+ DL +G +H + ES+ +GN ++
Sbjct: 248 ALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLN 307
Query: 245 LYSKFNL-IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K + + EA + F + +D+I+WN I A + L +FK+M ++ V P++
Sbjct: 308 MYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLEN-VAPNE 366
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T +++L+ACA L + + GK +HA + R DV + N+L+NMY +CG + + +F
Sbjct: 367 ITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAA 426
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
+ +++VSW+T+IAA+A H + L+ F ++ G+ D VT + L+AC+H G++KEG
Sbjct: 427 IRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEG 486
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
F SM +G++PD HF C++DLL RAG+L AE P D + +LLS C+
Sbjct: 487 VQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCK 546
Query: 484 LRRDVVIGERLAKQLFHLQPTTT-SPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
L D R+A +LF L+ S LLSN+YA G W DV RK +K P
Sbjct: 547 LHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDV---RKTRNRRAARKNPG 603
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
S IE+ T +F + SH + I +K LS
Sbjct: 604 CSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLS 637
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 215/420 (51%), Gaps = 12/420 (2%)
Query: 46 LYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYI 102
+Y KCG + A VF + N VSW+ +++ + G + AL ++ +M L P+ +
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFV-GNSLISMYMKVGYSSDALLVYGEA 161
F AI C+ + L +GQ +HA L+ + G +LI+MY + A + E
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR---QGLLPDRFSFAGGLEICSVSNDLR 218
+ LV++NALIAG+ N ++++ M+ +G+ PD +F+ L C+V D+
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
+G + TV S+ V N ++ +YSK + A K F ++ +D+I+WNT I+ +
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 279 HCADYEKGLSVFKEMS-NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD 337
+ L +F+ M ND +P+ TF +L AC L ++ G+ IH + D
Sbjct: 241 KQGAATQALELFQRMGPND--PKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESD 298
Query: 338 VGVGNALVNMYAKC-GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
+ +GN L+NMY KC + + ++F M R+V++WN +I A+ + AL +F+QM+
Sbjct: 299 LVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQ 358
Query: 397 ATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+ P+ +T +L+AC G ++G+A +++ + D+ L+++ R G L
Sbjct: 359 LENVAPNEITLSNVLSACAVLGAKRQGKA-VHALIASGRCKADVVLENSLMNMYNRCGSL 417
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 183/341 (53%), Gaps = 4/341 (1%)
Query: 144 MYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFS 203
MY K G +DAL V+ PN VS+ ++A F N + ++ M+ +GL PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 204 FAGGLEICSVSNDLRKGMILHCLTVKCK-LESNPFVGNTIMALYSKFNLIGEAEKAFRLI 262
F + +CS S DL++G +LH + ++ + LE + +G ++ +Y++ + A K F +
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 263 EEKDLISWNTFIAACSHCADYEKGLSVFKEM--SNDHGVRPDDFTFASILAACAGLASVQ 320
+K L++WN IA S D+ L ++++M + G++PD TF+S L AC + +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G++I A + D V NAL+NMY+KCG + + K+F+ + +R+V++WNT+I+ +A
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
AL+LF++M KP+ VTFIGLLTAC + +++G A + + G D+
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVRED-GYESDL 299
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
L+++ + LE + +D I L+ A
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVA 340
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 205/402 (50%), Gaps = 11/402 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + SS L+ C+ + QG + A + G D IV N ++N+Y+KCG + ARKVFD
Sbjct: 163 AITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFD 222
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
+ R++++W+ MISG+ + G ALE F +M PN F ++AC ++ L +
Sbjct: 223 RLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQ 282
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYS-SDALLVYGEAFEPNLVSFNALIAGFV 177
G+ IH + GY S +GN L++MY K S +A V+ +++++N LI +V
Sbjct: 283 GRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYV 342
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ Q + ++FK M + + P+ + + L C+V R+G +H L + +++
Sbjct: 343 QYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVV 402
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+ N++M +Y++ + + F I +K L+SW+T IAA + GL F E+ +
Sbjct: 403 LENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQE- 461
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLI-RMRLNQDVGVGNALVNMYAKCGLISC 356
G+ DD T S L+AC+ ++ G Q ++ L D +V++ ++ G +
Sbjct: 462 GLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEA 521
Query: 357 SYKLFNEM-LHRNVVSWNTIIAAHANH----RLGGSALKLFE 393
+ L ++M + V+W ++++ H R A KLFE
Sbjct: 522 AENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFE 563
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 190/558 (34%), Positives = 323/558 (57%), Gaps = 2/558 (0%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L +G +LHA ++ DV++ N++++ YAKCG++ LAR VFD M RN VS + ++SG
Sbjct: 27 LSKGKALHARLITAA-HFDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSG 85
Query: 78 HHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
+ +G H +L+ + NEY+ ++A+SA A ++S G+Q H Y++K G+A +V
Sbjct: 86 YASSGRHKESLQLLRVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQRYV 145
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
N+++ MY + + DA V+ + +FN++I G+++ Q + + + M +
Sbjct: 146 FNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAE 205
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
D S+ L C+ D G +H +K +LE N +VG+ ++ +Y K + + +A +
Sbjct: 206 KWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANR 265
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
AF ++ EK+++SW + A + YE L +F +M + GV+P++FT+A L +CAGLA
Sbjct: 266 AFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEME-GVQPNEFTYAVALNSCAGLA 324
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
+++ G + A +++ + V NAL+NMY+K G I ++++F M R+VVSWN II
Sbjct: 325 ALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIIT 384
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
+A+H L ++ F M + + P VTF+G+L+AC GLV E Y N+M K GI+
Sbjct: 385 GYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGIT 444
Query: 438 PDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQ 497
P EH+TC++ LL R G+L EAE + +G D + +LL++C++ ++ +G R+A+Q
Sbjct: 445 PGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHRVAEQ 504
Query: 498 LFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTV 557
+ L+P+ YVLLSN+YA W V RK +++ ++K P S I V FT
Sbjct: 505 ILQLEPSDVGTYVLLSNMYAKANRWDGVVKVRKHMRERAVRKSPGVSWIHVGSDVHVFTS 564
Query: 558 AEFSHSKIGEINYMLKTL 575
E H ++ +I L+ L
Sbjct: 565 EEKVHPQMDQIAKKLEEL 582
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 193/409 (47%), Gaps = 19/409 (4%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+S+ + + ++ G H +K G V N VL +Y +C M A KVF+ +S
Sbjct: 111 LSAAVSATANVRSYDMGRQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHMEDASKVFESVS 170
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISA---CAGIQSLVKGQQ 121
+ ++++MI+G+ G+ +L M ++ + S ++ CA ++ V G Q
Sbjct: 171 GFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHCASMKDSVLGAQ 230
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+HA +LK +VG++L+ MY K + DA + E N+VS+ A++ + +N+
Sbjct: 231 VHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNEL 290
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
E ++F M +G+ P+ F++A L C+ LR G L +K + V N
Sbjct: 291 YEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNA 350
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+M +YSK I +A + F + +D++SWN I +H +G+ F M + V P
Sbjct: 351 LMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSA-AVIP 409
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG------NALVNMYAKCGLIS 355
TF +L+ACA L V A + ++VG+ +V + + G +
Sbjct: 410 SYVTFVGVLSACAQLGLVD-----EAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLD 464
Query: 356 CSYK-LFNEMLHRNVVSWNTIIAA---HANHRLGGSALKLFEQMKATGI 400
+ + + N + +VV+W +++ + + N+ LG + Q++ + +
Sbjct: 465 EAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHRVAEQILQLEPSDV 513
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 150/298 (50%), Gaps = 11/298 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S ++L HC+ K G +HA LK ++ +V V + ++++Y KC + A + F+ +
Sbjct: 211 SYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVL 270
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
E+N+VSW+A+++ + Q + AL+ F M + PNE+ +A A+++CAG+ +L G
Sbjct: 271 PEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGN 330
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+ A +K G+ V N+L++MY K G DA V+ ++VS+N +I G+ +
Sbjct: 331 ALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHG 390
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVG 239
+G E F ML ++P +F G L C+ + + L+ + + +
Sbjct: 391 LAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHY 450
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEK----DLISWNTFIAACSHCADYEKGLSVFKEM 293
++ L + + EAE R I D+++W + + +C +Y G V +++
Sbjct: 451 TCMVGLLCRVGRLDEAE---RFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHRVAEQI 505
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 194/556 (34%), Positives = 303/556 (54%), Gaps = 4/556 (0%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
SLH +K G+ V V N +L+ Y K G + AR+VF EM +++ V+++AM+ G + G
Sbjct: 156 SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEG 215
Query: 83 EHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
H AL+ F+ M + + F+S ++ AG+ L+ G Q+HA L+ FV N
Sbjct: 216 LHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNN 275
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
SL+ Y K D ++ E E + VS+N +IA + NQ +F+ M + G
Sbjct: 276 SLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDR 335
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
+A L + D+ G +H V L S +GN ++ +YSK ++ A+ F
Sbjct: 336 QVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNF 395
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
EK ISW I +E+ L +F +M G+RPD TF+SI+ A + LA +
Sbjct: 396 SNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRR-AGLRPDRATFSSIIKASSSLAMI 454
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
G+Q+H++LIR V G+ LV+MYAKCG + + + F+EM RN +SWN +I+A+
Sbjct: 455 GLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAY 514
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
A++ +A+K+FE M G PDSVTF+ +L AC+H GL E YF+ M+ Y ISP
Sbjct: 515 AHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPW 574
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLF 499
EH+ C+ID LGR G + ++ + P DPI+ ++L +CR+ + + A +LF
Sbjct: 575 KEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLF 634
Query: 500 HLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAE 559
++PT +PYV+LSN+YA G W D A +K+++D G++KE YS +E++ F +
Sbjct: 635 GMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASND 694
Query: 560 FSHSKIGEINYMLKTL 575
+ I EI L L
Sbjct: 695 LTSPMIDEIKDELDRL 710
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 213/435 (48%), Gaps = 20/435 (4%)
Query: 41 NHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLL 97
N +L+ Y+ G + A+ +F RN +W+ M+ H AG AL F M ++
Sbjct: 78 NLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVI 137
Query: 98 PNEYIFASAIS--ACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL 155
P+ + ++ C + SL H +++KFG + FV N+L+ Y K G + A
Sbjct: 138 PDRVTVTTVLNLPGCT-VPSL------HPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAAR 190
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN 215
V+ E + + V++NA++ G + + ++F M R G+ F+F+ L + +
Sbjct: 191 RVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMA 250
Query: 216 DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIA 275
L G +H L ++ N FV N+++ YSK + + + + F + E+D +S+N IA
Sbjct: 251 HLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIA 310
Query: 276 ACSHCADYEKGLSVFKEMSN---DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
A + L +F+EM D V P +A++L+ L V GKQIHA L+ +
Sbjct: 311 AYAWNQCAATVLRLFREMQKLGFDRQVLP----YATMLSVAGSLPDVHIGKQIHAQLVLL 366
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
L + +GNAL++MY+KCG++ + F+ ++ +SW +I + + AL+LF
Sbjct: 367 GLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLF 426
Query: 393 EQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
M+ G++PD TF ++ A + ++ G + + ++ G + + L+D+ +
Sbjct: 427 SDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRS-GYKSSVFSGSVLVDMYAK 485
Query: 453 AGKLLEAEEYTKKFP 467
G L EA + P
Sbjct: 486 CGCLDEALRTFDEMP 500
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 204/412 (49%), Gaps = 19/412 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+L + L G +HA VL+ +V V+N +L+ Y+KC + R++FDEM
Sbjct: 238 TFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEM 297
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM-------HLLPNEYIFASAISACAGIQSL 116
ER+ VS++ +I+ + L F +M +LP +A+ +S + +
Sbjct: 298 PERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLP----YATMLSVAGSLPDV 353
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G+QIHA + G AS +GN+LI MY K G A + E + +S+ ALI G+
Sbjct: 354 HIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGY 413
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
V+N Q E+ ++F M R GL PDR +F+ ++ S + G LH ++ +S+
Sbjct: 414 VQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSV 473
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
F G+ ++ +Y+K + EA + F + E++ ISWN I+A +H + + + +F+ M +
Sbjct: 474 FSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLH- 532
Query: 297 HGVRPDDFTFASILAACA--GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
G PD TF S+LAAC+ GLA + K H + ++ +++ + G
Sbjct: 533 CGFNPDSVTFLSVLAACSHNGLAD-ECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCF 591
Query: 355 SCSYKLFNEMLHR-NVVSWNTIIAA---HANHRLGGSALKLFEQMKATGIKP 402
S K+ EM + + + W +I+ + H N L A M+ T P
Sbjct: 592 SQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATP 643
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
N F N I++ YS + A+ F ++ +W + A + LS+F+ M
Sbjct: 73 NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML 132
Query: 295 NDHGVRPDDFTFASI--LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
+ GV PD T ++ L C +H I+ L+ V V N L++ Y K G
Sbjct: 133 GE-GVIPDRVTVTTVLNLPGCT-------VPSLHPFAIKFGLDTHVFVCNTLLDAYCKHG 184
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
L++ + ++F EM ++ V++N ++ + L AL+LF M+ GI TF +LT
Sbjct: 185 LLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILT 244
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 326 HAHLIRMRLNQ----DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN 381
H H R +Q ++ N +++ Y+ G + + LF HRN +W ++ AHA
Sbjct: 58 HLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAA 117
Query: 382 HRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
AL LF M G+ PD VT +L
Sbjct: 118 AGRTSDALSLFRAMLGEGVIPDRVTVTTVL 147
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 208/641 (32%), Positives = 330/641 (51%), Gaps = 86/641 (13%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL HC TK +H ++K P++ + N++++ YAK ++ AR+VFD+M +RN
Sbjct: 21 LLKHCRDTK------KIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRN 74
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYI--FASAISACAGIQSLVK------- 118
L SW+ ++S + + E H +P + + S ISA AG L++
Sbjct: 75 LYSWNTLLSSYSKLA---CLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNL 131
Query: 119 -----------------------------GQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
G Q+H + +KFG+ S FVG+ L+ MY K G
Sbjct: 132 MLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTG 191
Query: 150 YSSDALLVYGEAFEPNLVSFN-------------------------------ALIAGFVE 178
A + E E N+V +N A+IAGF +
Sbjct: 192 LVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQ 251
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N + ++F+ M + L D+++F L C L++G +H ++ + N FV
Sbjct: 252 NGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFV 311
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
G+ ++ +Y K I AE FR + K+++SW + E+ + +F +M N+ G
Sbjct: 312 GSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNN-G 370
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ PDDFT S++++CA LAS++ G Q H + L + V NALV +Y KCG I S+
Sbjct: 371 IEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSH 430
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+LF+EM + + VSW +++ +A L+LFE M A G KPD VTFIG+L+AC+ AG
Sbjct: 431 RLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAG 490
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV++G F SM K + I P +H+TC+IDL RAG+L EA ++ K P D I +L
Sbjct: 491 LVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASL 550
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
LS+CR R++ IG+ A+ L L+P T+ Y+LLS++YA+ G W +VA RK ++D GL+
Sbjct: 551 LSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLR 610
Query: 539 KEPSYSMIEVQGTFEKFTVAEFS-------HSKIGEINYML 572
KEP S I+ + F+ + S +S++ ++NY +
Sbjct: 611 KEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKM 651
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 205/416 (49%), Gaps = 37/416 (8%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++S++L SK + G+ +H V+K G Q V V + ++++Y+K G + AR+ FDEM
Sbjct: 144 ALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEM 203
Query: 64 SERNLV-------------------------------SWSAMISGHHQAGEHLLALEFFS 92
E+N+V SW+AMI+G Q G A++ F
Sbjct: 204 PEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFR 263
Query: 93 QMHLLP---NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
+M L ++Y F S ++AC G+ +L +G+Q+HAY ++ Y FVG++L+ MY K
Sbjct: 264 EMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCK 323
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
A V+ + N+VS+ A++ G+ +N E+ ++F M G+ PD F+ +
Sbjct: 324 SIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVIS 383
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
C+ L +G HC + L S V N ++ LY K I ++ + F + D +S
Sbjct: 384 SCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVS 443
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
W ++ + + L +F+ M HG +PD TF +L+AC+ VQ G QI +
Sbjct: 444 WTALVSGYAQFGKANETLRLFESMLA-HGFKPDKVTFIGVLSACSRAGLVQKGNQIFESM 502
Query: 330 IR-MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAAHANHR 383
I+ R+ +++++++ G + + K N+M + + W +++++ HR
Sbjct: 503 IKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHR 558
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 152/288 (52%), Gaps = 5/288 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S+L C ALQ+G +HA +++ Q ++ V + ++++Y KC + A VF +M
Sbjct: 276 TFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKM 335
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+ +N+VSW+AM+ G+ Q G A++ F M + P+++ S IS+CA + SL +G
Sbjct: 336 NCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGA 395
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q H +L G S V N+L+++Y K G D+ ++ E + VS+ AL++G+ +
Sbjct: 396 QFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFG 455
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKG-MILHCLTVKCKLESNPFVG 239
+ + +F+ ML G PD+ +F G L CS + ++KG I + + ++
Sbjct: 456 KANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHY 515
Query: 240 NTIMALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAACSHCADYEKG 286
++ L+S+ + EA K ++ D I W + +++C + E G
Sbjct: 516 TCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIG 563
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 198/577 (34%), Positives = 307/577 (53%), Gaps = 4/577 (0%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+S L C K K+L G H + + P + N VL +Y KCG + ARKVFDE
Sbjct: 11 RSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDE 70
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKG 119
M ERNLVSW+ +IS + + G FS M L PN + + + L G
Sbjct: 71 MRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIG 130
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+QIH+++++ G S + V ++ +MY+K G+ A LV+ + E N V++ ++ G+ +
Sbjct: 131 KQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQA 190
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
++ +F M+ +G+ D + F+ L+ C+ +L G +H VK LES VG
Sbjct: 191 ERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVG 250
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ Y K + + A KAF I E + +SW+ I ++E+ L F+ + V
Sbjct: 251 TPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRT-RSV 309
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+ FT+ SI AC+ LA G Q HA I+ L +A++ MY++CG + + +
Sbjct: 310 DINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATR 369
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F + + V+W IIA +A ALKLF +M+ G++P++VTFI +LTAC+H+GL
Sbjct: 370 VFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGL 429
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V EG Y SM YG++ I+H+ C++D+ RAG L EA E + P D + LL
Sbjct: 430 VIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLL 489
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
C R++ IGE A+ LF L P T+ Y+L+ NLYAS G W + A RKM+ + L+K
Sbjct: 490 GGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAERNLRK 549
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
E S S I V+G +F V + H + EI L+ L+
Sbjct: 550 ELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEALN 586
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 1/125 (0%)
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
D G+ ++ + AC + S+ G+ H + R N + N+++ MY KCG ++
Sbjct: 3 DAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLA 62
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA-C 414
+ K+F+EM RN+VSWNTII+A+A + + +F M KP+ T+IG L +
Sbjct: 63 DARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLL 122
Query: 415 NHAGL 419
N +GL
Sbjct: 123 NPSGL 127
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 199/567 (35%), Positives = 330/567 (58%), Gaps = 11/567 (1%)
Query: 19 QQGISLHAAVLKMGI-QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
++G +HA +++ G+ + + N ++N+YAKCG + A VF M ++ V+W++MI+G
Sbjct: 405 RKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITG 464
Query: 78 HHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
Q + L A++ F +M L P+ + SA+S+CA + + G+Q+H LK G
Sbjct: 465 LDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLD 524
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE--KGFEVFKLM 192
V N+L+++Y + GY + + + + VS+N+LI G + + +P + E F +M
Sbjct: 525 VSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLI-GALADSEPSMLEAVESFLVM 583
Query: 193 LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI 252
+R G P+R +F L S + G +H L +K + ++ + N ++A Y K +
Sbjct: 584 MRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDM 643
Query: 253 GEAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
G E F R+ + +D +SWN+ I+ H K + + M G R D FTFA++L+
Sbjct: 644 GYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQK-GQRLDGFTFATVLS 702
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
ACA +A+++ G ++H +R L D+ +G+ALV+MYAKCG I + + F M RN+ S
Sbjct: 703 ACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYS 762
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
WN++I+ +A H G +L LF QMK G PD VTF+G+L+AC+HAGLV EG ++F+SM
Sbjct: 763 WNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMS 822
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA-CRLR-RDVV 489
+ YG++P +EHF+C++DLLGR G+L + E++ + P+ + ++ T+L A CR R+
Sbjct: 823 EIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTA 882
Query: 490 IGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQ 549
+G R A+ L ++PT Y+LLSN+YAS G W DVA R ++ + +KKE S + ++
Sbjct: 883 LGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMK 942
Query: 550 GTFEKFTVAEFSHSKIGEINYMLKTLS 576
F + SH + I LK L+
Sbjct: 943 DGVHVFVAGDKSHPEKDLIYEKLKELN 969
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 141/458 (30%), Positives = 231/458 (50%), Gaps = 26/458 (5%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
LH + K G D+ + N ++N+YA+ G + RKVFDEM RNLVSWS +ISG+ +
Sbjct: 95 LHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRM 154
Query: 84 HLLALEFFSQM---HLLPNEYIFASAISAC--AGIQSLVKGQQIHAYSLKFGYASISFVG 138
A E F +M +PN Y F S I AC G L G QIH K Y +
Sbjct: 155 PNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTAS 214
Query: 139 NSLISMYMK-VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ-- 195
N LISMY +G A + + NLVS N++I+ + + F++F M ++
Sbjct: 215 NVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVM 274
Query: 196 --GLLPDRFSFAGGLE-ICSVSNDLRKGMIL--HCLTV--KCKLESNPFVGNTIMALYSK 248
GL P+ ++F + CS++N G++L LT K + +VG+ +++ ++K
Sbjct: 275 GDGLKPNEYTFGSLISATCSLAN---SGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAK 331
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
IG A+ F+ + ++++S N I E+ + +F EM + + P+ +
Sbjct: 332 AGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMI-- 389
Query: 309 ILAACAGLASVQHGK----QIHAHLIRM-RLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
IL A +++GK ++HA LIR LN + +GN L+NMYAKCG I+ + +F
Sbjct: 390 ILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRL 449
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M +++ V+WN++I ++ A+K F++M+ T + P + T I L++C G + G
Sbjct: 450 MDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVG 509
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
E K G+ D+ L+ L G G + E ++
Sbjct: 510 EQLHCEGLKL-GLDLDVSVSNALLALYGECGYVKECQK 546
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 204/410 (49%), Gaps = 25/410 (6%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S L C+ + G LH LK+G+ DV VSN +L LY +CG + +K F M +
Sbjct: 495 SALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDY 554
Query: 67 NLVSWSAMISGHHQAGEHLL-ALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQI 122
+ VSW+++I + +L A+E F M PN F + ++A + + G+QI
Sbjct: 555 DHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQI 614
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE-PNLVSFNALIAGFVENQQ 181
HA LK A+ + + N+L++ Y K G ++ + + VS+N++I+G++ N+
Sbjct: 615 HALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNEL 674
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
K ++ M+++G D F+FA L C+ L +GM +H +V+ LES+ +G+
Sbjct: 675 LPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSA 734
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y+K I A + F ++ ++L SWN+ I+ + K L +F +M G P
Sbjct: 735 LVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQM-KLQGPLP 793
Query: 302 DDFTFASILAACAGLASVQHG-------KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
D TF +L+AC+ V G +I+ RM + +V++ + G +
Sbjct: 794 DHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEH------FSCMVDLLGRVGEL 847
Query: 355 SCSYKLFNEM-LHRNVVSWNTIIAA--HANHR---LGGSALKLFEQMKAT 398
+ N+M + NV+ W T++ A AN R LG A ++ +M+ T
Sbjct: 848 NKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPT 897
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 163/304 (53%), Gaps = 11/304 (3%)
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+++H K G+ + F+ N+LI++Y +VG V+ E NLVS++ LI+G+
Sbjct: 92 AEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTR 151
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSND--LRKGMILHCLTVKCKLESNP 236
N+ P + E+F+ M+ G +P+ ++F + C + L+ GM +H L K + ++
Sbjct: 152 NRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDV 211
Query: 237 FVGNTIMALY-SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
N ++++Y + ++ A +AF I ++L+S N+ I+ D +F M
Sbjct: 212 TASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQK 271
Query: 296 D---HGVRPDDFTFASILAACAGLAS--VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
+ G++P+++TF S+++A LA+ + +Q+ + + D+ VG+ALV+ +AK
Sbjct: 272 EVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAK 331
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK-ATGIKPDSVTFIG 409
G I + +F +M +RNVVS N +I + G A++LF +MK + + P+S I
Sbjct: 332 AGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMII- 390
Query: 410 LLTA 413
LTA
Sbjct: 391 -LTA 393
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 70/111 (63%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +++L C+ L++G+ +H ++ ++ D+++ + ++++YAKCG++ A + F+ M
Sbjct: 696 TFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMM 755
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACA 111
RNL SW++MISG+ + G +L+ F+QM L LP+ F +SAC+
Sbjct: 756 PARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACS 806
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
+ +++H L + D+ + N L+N+YA+ G + K+F+EM RN+VSW+ +I+ +
Sbjct: 90 KDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGY 149
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL--VKEGEAYFNSMEKTYGIS 437
+R+ A +LF +M + G P+ F ++ AC G +K G M KT ++
Sbjct: 150 TRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVN 209
Query: 438 PDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQ 497
D+ LI + G A +++ ++ + L +++S R D V A
Sbjct: 210 -DVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVS----AFD 264
Query: 498 LFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
+F +T V+ L ++ +G + A L +SGL
Sbjct: 265 IF----STMQKEVMGDGLKPNEYTFGSLISATCSLANSGL 300
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 192/579 (33%), Positives = 316/579 (54%), Gaps = 32/579 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++SLL C+ AL G H+ +K G+ D++V +L+LY KC + A + F
Sbjct: 354 TVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCY 413
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+ + ++ S + F+QM + +PN++ + S + C + + G+
Sbjct: 414 GQLDNLNKS---------------FQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGE 458
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH LK G+ +V + LI MY K G AL ++ E ++VS+ A+IAG+ ++
Sbjct: 459 QIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHD 518
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ + +FK M QG+ D FA + C+ L +G +H + + +GN
Sbjct: 519 KFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGN 578
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++LY++ + EA AF I KD +SWN+ ++ + +E+ L++F +M N G+
Sbjct: 579 ALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQM-NKAGLE 637
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ FTF S ++A A +A+V+ GKQIH + + + + V NAL+ +YAKCG I
Sbjct: 638 INSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTI------ 691
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
+ +SWN++I ++ H G ALKLFE MK + P+ VTF+G+L+AC+H GLV
Sbjct: 692 -------DDISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLV 744
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG +YF SM + + + P EH+ C++DLLGR+G L A+ + ++ P+ D +V TLLS
Sbjct: 745 DEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLS 804
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC + +++ IGE A L L+P ++ YVL+SN+YA G W R+M+KD G+KKE
Sbjct: 805 ACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKE 864
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSLAA 579
P S +EV + F + +H + I L+ L A
Sbjct: 865 PGRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGLDFRA 903
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 139/455 (30%), Positives = 243/455 (53%), Gaps = 26/455 (5%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L C+K + + G LH VLK G + V N ++ LY++ G + A ++F MS+R+
Sbjct: 257 VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRD 316
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHA 124
VS++++ISG Q G AL F +M+L P+ AS +SACA + +L G+Q H+
Sbjct: 317 RVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHS 376
Query: 125 YSLKFGYASISFVGNSLISMYMK---VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
Y++K G S V SL+ +Y+K + + + L YG+ N
Sbjct: 377 YAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLN---------------- 420
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
K F++F M +G++P++F++ L+ C+ G +H +K + N +V +
Sbjct: 421 --KSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSV 478
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y+K + A K FR ++E D++SW IA + + + L++FKEM D G++
Sbjct: 479 LIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEM-QDQGIKS 537
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D+ FAS ++ACAG+ ++ G+QIHA + D+ +GNALV++YA+CG + +Y F
Sbjct: 538 DNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAF 597
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+++ ++ VSWN++++ A AL +F QM G++ +S TF ++A + V+
Sbjct: 598 DQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVR 657
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
G+ + KT G + E LI L + G +
Sbjct: 658 IGKQIHGMIRKT-GYDSETEVSNALITLYAKCGTI 691
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 212/436 (48%), Gaps = 28/436 (6%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+HA + G + + N +++LY K G + A+KVF+ + R+ VSW AMISG Q G
Sbjct: 186 IHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGY 245
Query: 84 HLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLIS 143
A+ F Q+ +SAC ++ G+Q+H LK G++S ++V N+L++
Sbjct: 246 EEEAMLLFCQI-----------VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVT 294
Query: 144 MYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFS 203
+Y + G S A ++ + + VS+N+LI+G + + +FK M PD +
Sbjct: 295 LYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVT 354
Query: 204 FAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIE 263
A L C+ L G H +K + S+ V +++ LY K + I A + F
Sbjct: 355 VASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYG 414
Query: 264 EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGK 323
+ D + K +F +M + G+ P+ FT+ SIL C L + G+
Sbjct: 415 QLD---------------NLNKSFQIFTQMQIE-GIVPNQFTYPSILKTCTTLGATDLGE 458
Query: 324 QIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR 383
QIH +++ +V V + L++MYAK G + + K+F + +VVSW +IA + H
Sbjct: 459 QIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHD 518
Query: 384 LGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF 443
AL LF++M+ GIK D++ F ++AC + +G ++ G S D+
Sbjct: 519 KFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQ-IHAQSCLSGYSDDLSIG 577
Query: 444 TCLIDLLGRAGKLLEA 459
L+ L R GK+ EA
Sbjct: 578 NALVSLYARCGKVREA 593
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 219/451 (48%), Gaps = 41/451 (9%)
Query: 43 VLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLAL--EFFSQM---HLL 97
+++ Y G + A VFDEM R+L W+ + + E L+ F +M ++
Sbjct: 103 LIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTF--IAERLMGRVPGLFRRMLTKNVE 160
Query: 98 PNEYIFASAISACAG-IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALL 156
+E IFA + C+G S +QIHA ++ G+ S +F+ N LI +Y K G+ S A
Sbjct: 161 FDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKK 220
Query: 157 VYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSND 216
V+ + VS+ A+I+G +N E+ +F ++ L C+
Sbjct: 221 VFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIV--------------LSACTKVEF 266
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
G LH L +K S +V N ++ LYS+ + AE+ F + ++D +S+N+ I+
Sbjct: 267 FEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISG 326
Query: 277 CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
+ + L++FK+M+ D +PD T AS+L+ACA + ++ +GKQ H++ I+ +
Sbjct: 327 LAQQGYINRALALFKKMNLD-CQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTS 385
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
D+ V +L+++Y KC I +++ F + + + + N + ++F QM+
Sbjct: 386 DIVVEGSLLDLYVKCSDIKTAHEFF--LCYGQLDNLN-------------KSFQIFTQMQ 430
Query: 397 ATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
GI P+ T+ +L C G GE + KT G ++ + LID+ + GKL
Sbjct: 431 IEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKT-GFQFNVYVSSVLIDMYAKHGKL 489
Query: 457 LEAEEYTKKFPLGQDPIVLGTLLSACRLRRD 487
A + ++ L ++ +V T + A + D
Sbjct: 490 DHALKIFRR--LKENDVVSWTAMIAGYTQHD 518
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 158/328 (48%), Gaps = 17/328 (5%)
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
+ G LI Y+ G + A+ V+ E +L +N + F+ + + +F+ ML +
Sbjct: 98 YDGLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTK 157
Query: 196 GLLPDRFSFAGGLEICSVSN-DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGE 254
+ D FA L CS + R +H T+ ES+ F+ N ++ LY K +
Sbjct: 158 NVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSS 217
Query: 255 AEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA 314
A+K F ++ +D +SW I+ S E+ + +F ++ +L+AC
Sbjct: 218 AKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI---------------VLSACT 262
Query: 315 GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNT 374
+ + GKQ+H +++ + + V NALV +Y++ G +S + ++F+ M R+ VS+N+
Sbjct: 263 KVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNS 322
Query: 375 IIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTY 434
+I+ A AL LF++M KPD VT LL+AC G + G+ F+S
Sbjct: 323 LISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQ-FHSYAIKA 381
Query: 435 GISPDIEHFTCLIDLLGRAGKLLEAEEY 462
G++ DI L+DL + + A E+
Sbjct: 382 GMTSDIVVEGSLLDLYVKCSDIKTAHEF 409
>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
Length = 690
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 198/580 (34%), Positives = 316/580 (54%), Gaps = 10/580 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+ I+ LL ++ +L+ G+ LHAA++K+G D +++N+++++YAKCGK+ +A +VFD
Sbjct: 5 RMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDG 64
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
M ERN+VSW+A++ G GE L F +M PNE+ ++ + AC G G
Sbjct: 65 MPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAG 122
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
QIH ++ G+ V NSL+ MY K ++ DA V+ NL ++N++I+G+
Sbjct: 123 VQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHA 182
Query: 180 QQPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHC-LTVK-CKLESNP 236
Q VF+ M R+ PD F+FA L+ CS R+G +H + V+ SN
Sbjct: 183 GQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNA 242
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
+ ++ +Y K + + A + F +E ++ I W T I + ++ + +F+ +
Sbjct: 243 ILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSS 302
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
GVR D +S++A A A V+ GKQ+H + + DV V N+LV+MY KCGL
Sbjct: 303 -GVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGE 361
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ + F EM RNVVSW +I H G A+ LFE+M+A G++ D V ++ LL+AC+H
Sbjct: 362 AGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSH 421
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
+GLV E YF+ + + + P EH+ C++DLLGRAG+L EA+E P+ V
Sbjct: 422 SGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQ 481
Query: 477 TLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSG 536
TLLSACR+ +DV +G + L + YV+LSN+ A G W + G R ++ G
Sbjct: 482 TLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKG 541
Query: 537 LKKEPSYSMIEVQGTFEKF-TVAEFSHSKIGEINYMLKTL 575
L+K+ S EV F + +H + G+I L+ +
Sbjct: 542 LRKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREV 581
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 198/581 (34%), Positives = 313/581 (53%), Gaps = 4/581 (0%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ +++SL+ CS L G LHA K+G + + +LNLYAKC + A F
Sbjct: 372 SNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFL 431
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVK 118
E N+V W+ M+ + + + F QM + +PN+Y + S + C + L
Sbjct: 432 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL 491
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+QIH+ +K + ++V + LI MY K+G A + ++VS+ +IAG+ +
Sbjct: 492 GEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ 551
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+K F+ ML +G+ D + C+ L++G +H S+
Sbjct: 552 YNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPF 611
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N ++ LYSK I EA AF E D I+WN ++ + E+ L VF M N G
Sbjct: 612 QNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARM-NREG 670
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ ++FTF S + A + A+++ GKQ+HA + + + + V NA+++MYAKCG IS +
Sbjct: 671 IDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAK 730
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
K F E+ +N VSWN +I A++ H G AL F+QM + ++P+ VT +G+L+AC+H G
Sbjct: 731 KQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIG 790
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV +G YF SM YG++P EH+ C++D+L RAG L A+++ + P+ D +V TL
Sbjct: 791 LVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTL 850
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
LSAC + +++ IGE A L L+P ++ YVLLSNLYA W R+ +K+ G+K
Sbjct: 851 LSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVK 910
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSLAA 579
KEP S IEV+ + F V + +H EI+ K L+ A
Sbjct: 911 KEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFKDLTKRA 951
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 137/439 (31%), Positives = 226/439 (51%), Gaps = 5/439 (1%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+HA ++ G+ IV N +++LY++ G + AR+VFD + ++ SW AMISG +
Sbjct: 192 IHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNEC 251
Query: 84 HLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
+ A+ F M++L P Y F+S +SAC I+SL G+Q+H LK G++S ++V N+
Sbjct: 252 EVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 311
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
L+S+Y +G A ++ + + V++N LI G + EK E+FK M GL PD
Sbjct: 312 LVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPD 371
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+ A + CS L G LH T K SN + ++ LY+K + I A F
Sbjct: 372 SNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFL 431
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
E ++++ WN + A D +F++M + V P+ +T+ SIL C L ++
Sbjct: 432 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV-PNQYTYPSILKTCIRLGDLE 490
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G+QIH+ +I+ + V + L++MYAK G + ++ + ++VVSW T+IA +
Sbjct: 491 LGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 550
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
+ AL F QM GI+ D V ++AC +KEG+ ++ G S D+
Sbjct: 551 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDL 609
Query: 441 EHFTCLIDLLGRAGKLLEA 459
L+ L + G + EA
Sbjct: 610 PFQNALVTLYSKCGNIEEA 628
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 141/486 (29%), Positives = 243/486 (50%), Gaps = 12/486 (2%)
Query: 3 KSISSLLHHCSKTK-ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+++ LL C KT +L +G LH+ +LK+G + +S +L+ Y G + A KVFD
Sbjct: 68 QTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFD 127
Query: 62 EMSERNLVSWSAMI---SGHHQAGEHLLALEFFSQMHLLPNEYIFASAISAC-AGIQSLV 117
EM ER + +W+ MI + +G+ ++ PNE F+ + AC G +
Sbjct: 128 EMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFD 187
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+QIHA + G + V N LI +Y + G+ A V+ + + S+ A+I+G
Sbjct: 188 VVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLS 247
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+N+ + +F M G++P ++F+ L C L G LH L +K S+ +
Sbjct: 248 KNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY 307
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N +++LY + AE F + ++D +++NT I S C EK + +FK M D
Sbjct: 308 VCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLD- 366
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G+ PD T AS++ AC+ ++ G+Q+HA+ ++ + + AL+N+YAKC I +
Sbjct: 367 GLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETA 426
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
F E NVV WN ++ A+ ++ ++F QM+ I P+ T+ +L C
Sbjct: 427 LNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL 486
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTC--LIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
G ++ GE + + KT S + + C LID+ + GKL A + +F G+D +
Sbjct: 487 GDLELGEQIHSQIIKT---SFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA-GKDVVSW 542
Query: 476 GTLLSA 481
T+++
Sbjct: 543 TTMIAG 548
>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
Length = 807
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 214/641 (33%), Positives = 333/641 (51%), Gaps = 78/641 (12%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++S+L C AL G H +K+G+ + V N +L +Y KCG + A ++FD M
Sbjct: 144 TLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWM 203
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL-------LPNEYIFASAISACAGIQSL 116
S N VS++AM+ G Q+G AL F++M + + + ACAG ++
Sbjct: 204 SSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNV 263
Query: 117 VKG----QQIHAYSLKFGYASISFVGNS-------------------------------L 141
+ Q IHA ++ G+ S VGNS L
Sbjct: 264 ARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNIL 323
Query: 142 ISMYMKVGYSSDAL----LVYGEAFEPNLVSF---------------------------- 169
++ Y ++G AL L+ FEPN V++
Sbjct: 324 VTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKISKPSV 383
Query: 170 ---NALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCL 226
N L++G+ + + + E+F+ M Q + PDR + A L CS L G +H
Sbjct: 384 TTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSA 443
Query: 227 TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKG 286
+VK L ++ FV + ++ +YSK +G A+ F ++ E+D++ WN+ I+ + + E+
Sbjct: 444 SVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEA 503
Query: 287 LSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVN 346
FK+M ++G+ P + ++AS++ +CA L+S+ G+QIHA +++ +Q+V VG++L++
Sbjct: 504 FDFFKQM-RENGMFPTESSYASMINSCARLSSIPQGRQIHAQVLKDGYDQNVYVGSSLID 562
Query: 347 MYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVT 406
MYAKCG + + FN M+ +N+V+WN +I +A + G A++LFE M T KPDSVT
Sbjct: 563 MYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVT 622
Query: 407 FIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
FI +LT C+H+GLV E AYFNSME YGI P +EH+TCLID LGRAG+ E K
Sbjct: 623 FIAVLTGCSHSGLVDEAIAYFNSMESNYGIRPLVEHYTCLIDALGRAGRFAEVVAVIDKM 682
Query: 467 PLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVA 526
P D I+ LL+AC + + +GE AK LF L P SPYVLLSN+YA+ G GD +
Sbjct: 683 PYKDDAILWEVLLAACVVHHNAELGEFAAKHLFRLDPKNPSPYVLLSNIYATLGRHGDAS 742
Query: 527 GARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGE 567
R ++ G+ K YS + + F VA+ +GE
Sbjct: 743 AVRALMSSRGVVKGRGYSWVNHKDGARAFMVADDLGMNVGE 783
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 203/434 (46%), Gaps = 48/434 (11%)
Query: 34 QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQ 93
+P+V N ++ + G + AR + M +RN VSW+ +I+ ++ ALE +
Sbjct: 73 RPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRG 132
Query: 94 M---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGY 150
M L P + AS +SAC + +L G++ H ++K G FV N L+ MY K G
Sbjct: 133 MLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGS 192
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
+DA+ ++ PN VSF A++ G ++ + +F M R + D + + L
Sbjct: 193 VADAVRLFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGA 252
Query: 211 CS--------VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLI 262
C+ V+ +R +H L V+ +S+ VGN+++ +Y+K + EA K F +
Sbjct: 253 CAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESM 312
Query: 263 EEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG 322
++SWN + YE+ L V M + G P++ T++++LA+C
Sbjct: 313 SSVSIVSWNILVTGYGQLGCYERALEVLDLM-QESGFEPNEVTYSNMLASC--------- 362
Query: 323 KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH 382
I+ R DV A +F+++ +V +WNT+++ +
Sbjct: 363 -------IKAR---DVPSARA----------------MFDKISKPSVTTWNTLLSGYGQE 396
Query: 383 RLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEH 442
L ++LF +M+ ++PD T +L+ C+ G+++ G+ ++ K + D+
Sbjct: 397 ELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLL-LHNDMFV 455
Query: 443 FTCLIDLLGRAGKL 456
+ LID+ + G++
Sbjct: 456 ASGLIDMYSKCGQV 469
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 166/355 (46%), Gaps = 17/355 (4%)
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL 198
N+ IS + G + A + G + N VS+N +IA + P + E+++ ML++GL
Sbjct: 80 NAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLA 139
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKA 258
P F+ A L C L G H L VK L+ N FV N ++ +Y+K + +A +
Sbjct: 140 PTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRL 199
Query: 259 FRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA- 317
F + + +S+ + + + L +F MS +R D +S+L ACA
Sbjct: 200 FDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRS-AIRVDPVAVSSVLGACAQACA 258
Query: 318 -------SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVV 370
+++ + IHA ++R + D VGN+L++MYAK + + K+F M ++V
Sbjct: 259 GDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIV 318
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSM 430
SWN ++ + AL++ + M+ +G +P+ VT+ +L +C A V A F+ +
Sbjct: 319 SWNILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKI 378
Query: 431 EKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP---LGQDPIVLGTLLSAC 482
K P + + L+ G+ + E ++ + D L +LS C
Sbjct: 379 SK-----PSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTC 428
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 113/227 (49%), Gaps = 7/227 (3%)
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV-KCKLESNPFVGNTIMALYSKFN 250
+L GL D F +E+ S+S G+ H L + N + N ++ +
Sbjct: 36 VLAAGLAADTFLLNRLVELYSLS-----GLPCHALRAFRALPRPNVYSYNAAISAACRAG 90
Query: 251 LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
+ A + +++ +SWNT IAA + + L +++ M + G+ P +FT AS+L
Sbjct: 91 DLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQE-GLAPTNFTLASVL 149
Query: 311 AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVV 370
+AC +A++ G++ H +++ L+ + V N L+ MY KCG ++ + +LF+ M N V
Sbjct: 150 SACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEV 209
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
S+ ++ A AL+LF +M + I+ D V +L AC A
Sbjct: 210 SFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQA 256
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 212/614 (34%), Positives = 334/614 (54%), Gaps = 44/614 (7%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMI-------- 54
++ +LL C + L G +LHA K I P +SNH LY+KCG +
Sbjct: 10 QTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDL 69
Query: 55 -----------------------LARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFF 91
LAR+VFDE+ + ++VS++ +I+ + GE AL F
Sbjct: 70 TQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLF 129
Query: 92 SQMHLLP---NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKV 148
+++ L + + + I AC LV+ Q+H + + GY + V N++++ Y +
Sbjct: 130 AEVRELRFGLDGFTLSGVIIACGDDVGLVR--QLHCFVVVCGYDCYASVNNAVLACYSRK 187
Query: 149 GYSSDALLVY---GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA 205
G+ ++A V+ GE + VS+NA+I ++++ + E+F+ M+R+GL D F+ A
Sbjct: 188 GFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMA 247
Query: 206 GGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF-NLIGEAEKAFRLIEE 264
L + DL GM H + +K N VG+ ++ LYSK + E K F I
Sbjct: 248 SVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAA 307
Query: 265 KDLISWNTFIAACSHCADY-EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGK 323
DL+ WNT I+ S D E G+ F+EM ++ G PDD +F + +AC+ L+S GK
Sbjct: 308 PDLVLWNTMISGFSQYEDLSEDGIWCFREMQHN-GFHPDDCSFVCVTSACSNLSSPSVGK 366
Query: 324 QIHAHLIRMRLNQD-VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH 382
Q+HA I+ + + V V NALV MY+KCG + + ++F+ M N+VS N++IA +A H
Sbjct: 367 QVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQH 426
Query: 383 RLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEH 442
+ +L+LFE M I P+++TFI +L+AC H G V+EG+ YFN M++ + I P+ EH
Sbjct: 427 GVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEH 486
Query: 443 FTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQ 502
++C+IDLLGRAGKL EAE + P I TLL ACR +V + + A + L+
Sbjct: 487 YSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLE 546
Query: 503 PTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
P +PYV+LSN+YAS W + A ++++++ G+KK+P S IE+ F + SH
Sbjct: 547 PYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSH 606
Query: 563 SKIGEIN-YMLKTL 575
I EI+ YM + L
Sbjct: 607 PMIKEIHVYMGEIL 620
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 192/578 (33%), Positives = 317/578 (54%), Gaps = 10/578 (1%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
++KS SSL +++ G LH +LK G V N ++ Y K ++ ARKVF
Sbjct: 50 VSKSFSSL-------RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVF 102
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAIS---ACAGIQSLV 117
DEM+ER+++SW+++I+G+ G L F QM + E A+ +S CA + +
Sbjct: 103 DEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLIS 162
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+ +H+ +K ++ N+L+ MY K G A V+ E + ++VS+ ++IAG+
Sbjct: 163 LGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYA 222
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ ++F+ M +G+ PD ++ L C+ L +G +H + L + F
Sbjct: 223 REGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIF 282
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N +M +Y+K + EAE F + KD+ISWNT I S + LS+F + +
Sbjct: 283 VSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEK 342
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
PD+ T A +L ACA L++ G++IH +++R D V N+LV+MYAKCG + +
Sbjct: 343 RFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLA 402
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+ LF+++ +++VSW +IA + H G A+ LF QM+ GI+ D ++F+ LL AC+H+
Sbjct: 403 HMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHS 462
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV EG +FN M I P +EH+ C++D+L R G L++A + + P+ D + G
Sbjct: 463 GLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGA 522
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL CR+ DV + E++A+++F L+P T YVL++N+YA W V RK + GL
Sbjct: 523 LLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGL 582
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+K P S IE++G F + S+ + I L+ +
Sbjct: 583 RKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKV 620
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 203/404 (50%), Gaps = 6/404 (1%)
Query: 60 FDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSL 116
FDE+ + W+ +++ ++G+ ++ F +M + + Y F+ + + ++S+
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G+Q+H + LK G+ + VGNSL++ Y+K A V+ E E +++S+N++I G+
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
V N EKG VF ML G+ D + C+ S + G +H + VK
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
NT++ +YSK + A+ FR + ++ ++S+ + IA + + + +F+EM +
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM-EE 239
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
G+ PD +T ++L CA + GK++H + L D+ V NAL++MYAKCG +
Sbjct: 240 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 299
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFE-QMKATGIKPDSVTFIGLLTACN 415
+ +F+EM ++++SWNTII ++ + AL LF ++ PD T +L AC
Sbjct: 300 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA 359
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+G + + G D L+D+ + G LL A
Sbjct: 360 SLSAFDKGREIHGYIMRN-GYFSDRHVANSLVDMYAKCGALLLA 402
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 193/548 (35%), Positives = 305/548 (55%), Gaps = 4/548 (0%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+H +K DV V + ++N Y K G + ARK+FD M ERNLVSW+ MISG+
Sbjct: 134 VHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQM 193
Query: 84 HLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
AL F M L+ NE++F S +SA + + G+Q+H +K G V N+
Sbjct: 194 AKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNA 253
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
L++MY K G + +L+++ + N ++++ALI G+ + K ++F M G +P
Sbjct: 254 LVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPS 313
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
F+ G L+ CS + +G H +K E+ + ++ +Y+KF G+A K F
Sbjct: 314 EFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFD 373
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ E DL+ W + IA E+ LS++ M + P++ T AS+L AC+ LA+++
Sbjct: 374 FLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQM-RKILPNELTMASVLKACSNLAALE 432
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
GKQIHA I+ L ++ + +AL MYAKCG + +F ML R++VSWN +I+ +
Sbjct: 433 QGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLS 492
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
+ G AL+LFE+M+ G KPD +TF+ +L+AC+H G+VK G AYFN M + + P +
Sbjct: 493 QNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDEFCLVPRV 552
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH 500
EH+ C++D+L RAGKL EA+E+ + + + LL ACR + +G ++L
Sbjct: 553 EHYACMVDVLSRAGKLNEAKEFIESAIIDHGMCLWRILLPACRNHCNYELGAYAGEKLME 612
Query: 501 LQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEF 560
L +S YVLLS++Y + G DV R+M+K G++KE S IE++ F V +
Sbjct: 613 LGSRESSAYVLLSSIYTAMGRLADVVRVRRMMKVRGVRKETGCSWIELKSHVHVFVVGDQ 672
Query: 561 SHSKIGEI 568
H +I EI
Sbjct: 673 IHPQIEEI 680
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 239/465 (51%), Gaps = 11/465 (2%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDV-IVSNHVLNLYAKCGKMILARKVFD 61
+S +LL + K+L++G LHA ++K+ ++N+++ YAKCG + A+ VF+
Sbjct: 8 RSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFE 67
Query: 62 EMSERNLVSWSAMISG--HHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA-GIQS 115
+ +N+VS++ +I G H+ + LE F +M ++LP+ + F +A A +
Sbjct: 68 NLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALNLGC 127
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
+Q+H +K FVG+SL++ Y KVG +A ++ E NLVS+ +I+G
Sbjct: 128 NFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISG 187
Query: 176 FVENQQPEKGFEVFKLM-LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
+ Q ++ VF LM L +G L + F F L + G +HC+ VK +
Sbjct: 188 YASKQMAKEALGVFGLMRLVEGNL-NEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLE 246
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
V N ++ +Y+K + + F + +K+ I+W+ I S D K L +F +M
Sbjct: 247 FVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKM- 305
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
+ G P +FT +L AC+ +A+++ GKQ H +L++ + ALV+MYAK G
Sbjct: 306 HYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFT 365
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ K F+ +L ++V W +IIA + + AL ++ +M+ I P+ +T +L AC
Sbjct: 366 GDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKAC 425
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
++ +++G+ ++ YG+ P++ + L + + G L E
Sbjct: 426 SNLAALEQGKQ-IHARTIKYGLGPELSIRSALSTMYAKCGSLEEG 469
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 176/308 (57%), Gaps = 4/308 (1%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
+ G +H V+K G+ V V N ++ +YAKCG + + +F+ S++N ++WSA+I+G
Sbjct: 229 VDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITG 288
Query: 78 HHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
+ QAG+ AL+ FS+MH +P+E+ + AC+ + ++ +G+Q H Y LK GY +
Sbjct: 289 YSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQ 348
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
+ +L+ MY K G++ DA + EP+LV + ++IAG+V+N + E+ ++ M
Sbjct: 349 IYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQM 408
Query: 195 QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGE 254
+ +LP+ + A L+ CS L +G +H T+K L + + + +Y+K + E
Sbjct: 409 RKILPNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEE 468
Query: 255 AEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA 314
FR + ++D++SWN I+ S + L +F+EM + G +PD TF ++L+AC+
Sbjct: 469 GVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLE-GTKPDHITFVTVLSACS 527
Query: 315 GLASVQHG 322
+ V+ G
Sbjct: 528 HMGIVKRG 535
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 185/364 (50%), Gaps = 12/364 (3%)
Query: 98 PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGY-ASISFVGNSLISMYMKVGYSSDALL 156
P F + + A +SL KGQ +HA+ +K Y +S +++ N+LI Y K G+ A L
Sbjct: 5 PQNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKL 64
Query: 157 VYGEAFEPNLVSFNALIAGFVENQQPEKGF--EVFKLMLRQGLLPDRFSFAGGLEICSV- 213
V+ N+VS+N LI G N F E+F+ M+ +LPD +F G ++
Sbjct: 65 VFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALN 124
Query: 214 ---SNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
+ D R+ +H L +K + FVG++++ Y K + EA K F + E++L+SW
Sbjct: 125 LGCNFDARQ---VHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSW 181
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
T I+ + ++ L VF M G ++F F S+L+A V GKQ+H ++
Sbjct: 182 TTMISGYASKQMAKEALGVFGLMRLVEG-NLNEFVFTSVLSALVCPEFVDSGKQVHCVVV 240
Query: 331 RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALK 390
+ + + V V NALV MYAKCG ++ S LF +N ++W+ +I ++ ALK
Sbjct: 241 KNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALK 300
Query: 391 LFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLL 450
LF +M G P T +G+L AC+ ++EG+ + K+ G I T L+D+
Sbjct: 301 LFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKS-GYETQIYTATALVDMY 359
Query: 451 GRAG 454
+ G
Sbjct: 360 AKFG 363
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 155/292 (53%), Gaps = 13/292 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ +L CS A+++G H +LK G + + + ++++YAK G ARK FD +
Sbjct: 316 TLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFL 375
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
E +LV W+++I+G+ Q G++ AL + +M + LPNE AS + AC+ + +L +G+
Sbjct: 376 LEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGK 435
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIHA ++K+G + ++L +MY K G + +L++ + ++VS+NA+I+G +N
Sbjct: 436 QIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNG 495
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKG-----MILHCLTVKCKLESN 235
+ E+F+ M +G PD +F L CS +++G M+ + ++E
Sbjct: 496 HGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDEFCLVPRVEHY 555
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFR-LIEEKDLISWNTFIAACSHCADYEKG 286
++ + S+ + EA++ I + + W + AC + +YE G
Sbjct: 556 A----CMVDVLSRAGKLNEAKEFIESAIIDHGMCLWRILLPACRNHCNYELG 603
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 125/264 (47%), Gaps = 10/264 (3%)
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK-LESNPFVGNTIMALYSKFNLIGEAEK 257
P SF L + L+KG ILH +K L S ++ N ++ Y+K + A+
Sbjct: 5 PQNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKL 64
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKG----LSVFKEMSNDHGVRPDDFTFASILAAC 313
F ++ K+++S+N I SH + KG L +F+ M ++ + PD TF + A
Sbjct: 65 VFENLKHKNVVSYNCLIHGLSH--NGSKGSNFVLELFRRMIANN-ILPDAHTFPGVFTAA 121
Query: 314 A-GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
A L +Q+H I+ DV VG++LVN Y K G + + KLF+ M RN+VSW
Sbjct: 122 ALNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSW 181
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
T+I+ +A+ ++ AL +F M+ + F +L+A V G+ + K
Sbjct: 182 TTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVK 241
Query: 433 TYGISPDIEHFTCLIDLLGRAGKL 456
G+ + L+ + + G L
Sbjct: 242 N-GVLEFVSVLNALVTMYAKCGNL 264
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 192/578 (33%), Positives = 317/578 (54%), Gaps = 10/578 (1%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
++KS SSL +++ G LH +LK G V N ++ Y K ++ ARKVF
Sbjct: 201 VSKSFSSL-------RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVF 253
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAIS---ACAGIQSLV 117
DEM+ER+++SW+++I+G+ G L F QM + E A+ +S CA + +
Sbjct: 254 DEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLIS 313
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+ +H+ +K ++ N+L+ MY K G A V+ E + ++VS+ ++IAG+
Sbjct: 314 LGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYA 373
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ ++F+ M +G+ PD ++ L C+ L +G +H + L + F
Sbjct: 374 REGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIF 433
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N +M +Y+K + EAE F + KD+ISWNT I S + LS+F + +
Sbjct: 434 VSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEK 493
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
PD+ T A +L ACA L++ G++IH +++R D V N+LV+MYAKCG + +
Sbjct: 494 RFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLA 553
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+ LF+++ +++VSW +IA + H G A+ LF QM+ GI+ D ++F+ LL AC+H+
Sbjct: 554 HMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHS 613
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV EG +FN M I P +EH+ C++D+L R G L++A + + P+ D + G
Sbjct: 614 GLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGA 673
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL CR+ DV + E++A+++F L+P T YVL++N+YA W V RK + GL
Sbjct: 674 LLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGL 733
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+K P S IE++G F + S+ + I L+ +
Sbjct: 734 RKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKV 771
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 232/461 (50%), Gaps = 6/461 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+++ S+L C+ +K+L+ G + + G D + + + +Y CG + A +VFDE
Sbjct: 95 RTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDE 154
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
+ + W+ +++ ++G+ ++ F +M + + Y F+ + + ++S+ G
Sbjct: 155 VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGG 214
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+H + LK G+ + VGNSL++ Y+K A V+ E E +++S+N++I G+V N
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
EKG VF ML G+ D + C+ S + G +H + VK
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 334
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
NT++ +YSK + A+ FR + ++ ++S+ + IA + + + +F+EM + G+
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME-EEGI 393
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
PD +T ++L CA + GK++H + L D+ V NAL++MYAKCG + +
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 453
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFE-QMKATGIKPDSVTFIGLLTACNHAG 418
+F+EM ++++SWNTII ++ + AL LF ++ PD T +L AC
Sbjct: 454 VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS 513
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+G + + G D L+D+ + G LL A
Sbjct: 514 AFDKGREIHGYIMRN-GYFSDRHVANSLVDMYAKCGALLLA 553
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%)
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D T S+L CA S++ GK++ + D +G+ L MY CG + + ++F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTF 407
+E+ + WN ++ A ++ LF++M ++G++ DS TF
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 187/574 (32%), Positives = 320/574 (55%), Gaps = 6/574 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGI-QPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+LL + TK+ +QG LHA ++ I + + ++ + YA CG M A +FD +
Sbjct: 64 ALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVL 123
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQI 122
+N W+ MI G+ G + +L + +M + + + + AC + + G+++
Sbjct: 124 KNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRV 183
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H+ + G S +VGNSL++MY K G A +V+ E +L S+N +I+G+ +N
Sbjct: 184 HSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADS 243
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES-NPFVGNT 241
F VF LM + GL D + G L C+ +++G ++H V+ + + N F N+
Sbjct: 244 GTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNS 303
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y N + +A + F + KD +SWN+ I + D + L +F+ M+ D G P
Sbjct: 304 LIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALD-GSGP 362
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D TF ++L AC +A++++G IH++L++ + + VG ALV+MY+KCG ++CS ++F
Sbjct: 363 DQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVF 422
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+EM +++VSW+ ++A + H G A+ + + MKA + PD+ F +L+AC+HAGLV
Sbjct: 423 DEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVV 482
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
EG+ F MEK Y + P + H++C++DLLGRAG L EA + + + LL+A
Sbjct: 483 EGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTA 542
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
RL +++ + E A+++F + P S Y+ LSN+YA++ W DV R M++ GLKK P
Sbjct: 543 SRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSP 602
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S IE+ +F V + SH + +I L L
Sbjct: 603 GCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNEL 636
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 200/579 (34%), Positives = 325/579 (56%), Gaps = 12/579 (2%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+S++L CS L+ G +HA +L+ G + D + N +++ Y KCG++ A K+FD M
Sbjct: 252 LSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMP 311
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQ 121
+N++SW+ ++SG+ Q H A+E F+ M L P+ + +S +++CA + +L G Q
Sbjct: 312 NKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQ 371
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE--- 178
+HAY++K + S+V NSLI MY K ++A V+ ++V FNA+I G+
Sbjct: 372 VHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGT 431
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ +F M + + P +F L + L +H L K L + F
Sbjct: 432 QWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFA 491
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM--SND 296
G+ ++A+YS + ++ F ++ KDL+ WN+ + ++ E+ L++F E+ S D
Sbjct: 492 GSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRD 551
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
RPD+FTF ++ A LAS+Q G++ H L++ L + + NAL++MYAKCG
Sbjct: 552 ---RPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPED 608
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
++K F+ R+VV WN++I+++ANH G AL++ E+M GI+P+ +TF+G+L+AC+H
Sbjct: 609 AHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSH 668
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
AGLV++G F M + +GI P+ EH+ C++ LLGRAG+L EA E +K P IV
Sbjct: 669 AGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWR 727
Query: 477 TLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSG 536
+LLS C +V + E A+ P + + LLSN+YAS GMW D R+ +K G
Sbjct: 728 SLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIYASKGMWTDAKKVRERMKFEG 787
Query: 537 LKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ KEP S IE+ F + SH K +I +L L
Sbjct: 788 VVKEPGRSWIEINKEVHIFLSKDKSHCKANQIYEVLDDL 826
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 130/458 (28%), Positives = 244/458 (53%), Gaps = 10/458 (2%)
Query: 5 ISSLLHHCSKTKALQQGI--SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+SS + CS + + L + ++K DV V +++ Y K G + AR VFD
Sbjct: 149 LSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDA 208
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
+ E++ V+W+ MISG + G ++L+ F Q+ +++P+ YI ++ +SAC+ + L G
Sbjct: 209 LPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGG 268
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+QIHA+ L++G+ + + N LI Y+K G A ++ N++S+ L++G+ +N
Sbjct: 269 KQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQN 328
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
++ E+F M + GL PD F+ + L C+ + L G +H T+K L ++ +V
Sbjct: 329 SLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVT 388
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA---DYEKGLSVFKEMSND 296
N+++ +Y+K + + EA K F + D++ +N I S + L++F +M
Sbjct: 389 NSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRF- 447
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
+RP TF S+L A A L S+ KQIH + + LN D+ G+AL+ +Y+ C +
Sbjct: 448 RLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKD 507
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
S +F+EM +++V WN++ + + AL LF +++ + +PD TF+ ++TA +
Sbjct: 508 SRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGN 567
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
++ G+ + + K G+ + L+D+ + G
Sbjct: 568 LASLQLGQEFHCQLLKR-GLECNPYITNALLDMYAKCG 604
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 126/401 (31%), Positives = 218/401 (54%), Gaps = 14/401 (3%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG--HHQA 81
+H ++ G++ D +SN ++NLY++ G M+ ARKVF++M ERNLV+WS M+S HH
Sbjct: 66 VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125
Query: 82 GEHLLA--LEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ--QIHAYSLKFGYASISFV 137
E L L+F+ PNEYI +S I AC+G+ + Q+ ++ +K + +V
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYV 185
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
G LI Y+K G A LV+ E + V++ +I+G V+ + ++F ++ +
Sbjct: 186 GTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNV 245
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
+PD + + L CS+ L G +H ++ E + + N ++ Y K + A K
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHK 305
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F + K++ISW T ++ + +++ + +F M G++PD F +SIL +CA L
Sbjct: 306 LFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPK-FGLKPDMFACSSILTSCASLH 364
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
+++ G Q+HA+ I+ L D V N+L++MYAKC ++ + K+F+ +VV +N +I
Sbjct: 365 ALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIE 424
Query: 378 AHANHRLGG-----SALKLFEQMKATGIKPDSVTFIGLLTA 413
++ RLG AL +F M+ I+P +TF+ LL A
Sbjct: 425 GYS--RLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRA 463
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 141/283 (49%), Gaps = 4/283 (1%)
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
R FA L++ ++ + L ++H + LE + ++ N +M LYS+ + A K F
Sbjct: 44 RREFARLLQLRALDDPLLYHNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFE 103
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ E++L++W+T ++AC+H YE+ L VF + P+++ +S + AC+GL
Sbjct: 104 KMPERNLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSG 163
Query: 321 HGK--QIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA 378
Q+ + L++ R ++DV VG L++ Y K G I + +F+ + ++ V+W T+I+
Sbjct: 164 RWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISG 223
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISP 438
+L+LF Q+ + PD +L+AC+ ++ G+ + + YG
Sbjct: 224 CVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR-YGHEK 282
Query: 439 DIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
D LID + G++ A + P ++ I TLLS
Sbjct: 283 DASLMNVLIDSYVKCGRVRAAHKLFDGMP-NKNIISWTTLLSG 324
>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
Length = 886
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 198/580 (34%), Positives = 316/580 (54%), Gaps = 10/580 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+ I+ LL ++ +L+ G+ LHAA++K+G D +++N+++++YAKCGK+ +A +VFD
Sbjct: 201 RMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDG 260
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
M ERN+VSW+A++ G GE L F +M PNE+ ++ + AC G G
Sbjct: 261 MPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAG 318
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
QIH ++ G+ V NSL+ MY K ++ DA V+ NL ++N++I+G+
Sbjct: 319 VQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHA 378
Query: 180 QQPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHC-LTVK-CKLESNP 236
Q VF+ M R+ PD F+FA L+ CS R+G +H + V+ SN
Sbjct: 379 GQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNA 438
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
+ ++ +Y K + + A + F +E ++ I W T I + ++ + +F+ +
Sbjct: 439 ILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSS 498
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
GVR D +S++A A A V+ GKQ+H + + DV V N+LV+MY KCGL
Sbjct: 499 -GVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGE 557
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ + F EM RNVVSW +I H G A+ LFE+M+A G++ D V ++ LL+AC+H
Sbjct: 558 AGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSH 617
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
+GLV E YF+ + + + P EH+ C++DLLGRAG+L EA+E P+ V
Sbjct: 618 SGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQ 677
Query: 477 TLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSG 536
TLLSACR+ +DV +G + L + YV+LSN+ A G W + G R ++ G
Sbjct: 678 TLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKG 737
Query: 537 LKKEPSYSMIEVQGTFEKF-TVAEFSHSKIGEINYMLKTL 575
L+K+ S EV F + +H + G+I L+ +
Sbjct: 738 LRKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREV 777
>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
Length = 1134
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 186/534 (34%), Positives = 308/534 (57%), Gaps = 8/534 (1%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH 95
++I SN+++++Y KC + ++A KVFD M ERN+VSW+A++SGH G+ +L F++M
Sbjct: 403 NLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMG 462
Query: 96 ---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSS 152
+ PNE+ F++ + AC + +L KG QIH + LK G+ + VGNSL+ MY K G +
Sbjct: 463 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 522
Query: 153 DALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL--LPDRFSFAGGLEI 210
+A V+ +L+S+NA+IAG+V + F +M + PD F+ L+
Sbjct: 523 EAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKA 582
Query: 211 CSVSNDLRKGMILHCLTVKCKLE--SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLI 268
CS + + G +H V+ S+ + +++ LY K + A KAF I+EK +I
Sbjct: 583 CSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMI 642
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
SW++ I + D+ + + +FK + + + D F +SI+ A A +Q GKQ+ A
Sbjct: 643 SWSSLILGYAQEGDFVEAMGLFKRL-QELSSQIDSFVLSSIIGVFADFALLQQGKQMQAL 701
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
++++ + V N+LV+MY KCGL+ + K F EM ++V+SW +I + H LG A
Sbjct: 702 VVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKA 761
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID 448
+ +F +M I+PD V ++ +L+AC+H+G++KEGE F+ + +T GI P +EH+ C++D
Sbjct: 762 VSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVD 821
Query: 449 LLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSP 508
LLGRAG+L EA+ P+ + + TLLS CR+ D+ +G+ + K L + +
Sbjct: 822 LLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGKNPAN 881
Query: 509 YVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
YV++SNLY G W + AR++ GL+KE S +E++ F E SH
Sbjct: 882 YVMMSNLYGQAGYWNEQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSH 935
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 207/411 (50%), Gaps = 15/411 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S+ L C AL++G+ +H LK+G + V V N ++++Y+KCG++ A KVF M
Sbjct: 472 TFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWM 531
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL-----PNEYIFASAISACAGIQSLVK 118
R+L+SW+AMI+G+ AG AL F M P+E+ S + AC+ +
Sbjct: 532 VGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIYA 591
Query: 119 GQQIHAYSLKFGY--ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G+QIH + ++ G+ S + + SL+ +Y+K G A + + E ++S+++LI G+
Sbjct: 592 GKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGY 651
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
+ + +FK + D F + + + + L++G + L VK
Sbjct: 652 AQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLET 711
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
V N+++ +Y K L+ EAEK F ++ KD+ISW I +K +S+F +M
Sbjct: 712 SVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLR- 770
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLIS 355
H + PD+ + ++L+AC+ ++ G+++ + L+ + + V +V++ + G +
Sbjct: 771 HNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRLK 830
Query: 356 CSYKLFNEM-LHRNVVSWNTIIA---AHANHRLGGSALKLFEQMKATGIKP 402
+ L + M + NV W T+++ H + LG K+ ++ G P
Sbjct: 831 EAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKIL--LRIDGKNP 879
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 192/564 (34%), Positives = 316/564 (56%), Gaps = 10/564 (1%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYA--KCGKMILARKVFDEMSERNLVSWSAMI 75
+ Q +HA +L+ G+ D ++ ++ + + G + AR VF ++ + +++I
Sbjct: 1 MSQLKQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSII 60
Query: 76 SGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYA 132
G H AL F+ +M L+P+ Y F S +C ++ +G+QIH +S K G+A
Sbjct: 61 RGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSC---RNSSEGKQIHCHSTKLGFA 117
Query: 133 SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM 192
S ++ N+L++MY G A V+ + + +VS+ +I + QP + +F M
Sbjct: 118 SDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRM 177
Query: 193 LR-QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
++ + + P+ + L C+ + DL +H + + + +M +Y K
Sbjct: 178 MKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGC 237
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ A F +EK+L SWN I ++YE+ L +F+EM G++ D T AS+L
Sbjct: 238 VQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTK-GIKGDKVTMASLLL 296
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
AC L +++ GK +HA++ + R++ DV +G ALV+MYAKCG I + ++F+EM ++V++
Sbjct: 297 ACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMT 356
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
W +I A +AL+ F++M G+KPD++TF+G+L AC+HAG V EG ++FNSM
Sbjct: 357 WTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMS 416
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
TYGI P IEH+ L+D+LGRAG++ EAEE K P+ D VLG LL ACR+ ++
Sbjct: 417 DTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAA 476
Query: 492 ERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGT 551
ER AKQL + P + YVLLSN+Y S W + R+++ + G++K P S IEV G
Sbjct: 477 ERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGV 536
Query: 552 FEKFTVAEFSHSKIGEINYMLKTL 575
+F + SH + EIN ML+ +
Sbjct: 537 VHEFVKGDSSHRQSSEINEMLEDM 560
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 163/323 (50%), Gaps = 8/323 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SL C + +G +H K+G D N ++N+Y+ CG ++ ARKVFD+M
Sbjct: 90 TFPSLFKSCRNS---SEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKM 146
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKG 119
++ +VSW+ MI H Q + A+ F +M ++ PNE + ++ACA + L
Sbjct: 147 EDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMV 206
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
++IH Y + G+ + L+ +Y K G A ++ +A E NL S+N +I G VE+
Sbjct: 207 KRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVED 266
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
E+ +F+ M +G+ D+ + A L C+ L G LH K +++ + +G
Sbjct: 267 SNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALG 326
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ +Y+K I A + F + EKD+++W I + C E L F EM + GV
Sbjct: 327 TALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEM-HIKGV 385
Query: 300 RPDDFTFASILAACAGLASVQHG 322
+PD TF +LAAC+ V G
Sbjct: 386 KPDAITFVGVLAACSHAGFVDEG 408
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 117/221 (52%), Gaps = 3/221 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L C++ + L +H + + G V+++ ++++Y KCG + LAR +FD+
Sbjct: 189 TLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKA 248
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
E+NL SW+ MI+GH + + AL F +M + ++ AS + AC + +L G+
Sbjct: 249 QEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGK 308
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+HAY K +G +L+ MY K G A+ V+ E E +++++ ALI G
Sbjct: 309 WLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCG 368
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
Q E + F M +G+ PD +F G L CS + + +G+
Sbjct: 369 QAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGI 409
>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
Length = 772
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 208/570 (36%), Positives = 327/570 (57%), Gaps = 12/570 (2%)
Query: 17 ALQQGISLHAAVLKMGIQPDVI-VSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMI 75
L++G +H V+ G+ ++ + N ++N+YAKCG + AR+VF M E++ VSW++MI
Sbjct: 48 GLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMI 107
Query: 76 SGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYA 132
+G Q G + A+E + M +LP + S++S+CA ++ GQQIH SLK G
Sbjct: 108 TGLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGID 167
Query: 133 SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ--PEKGFEVFK 190
V N+L+++Y + GY ++ ++ E + VS+N++I +++ PE F
Sbjct: 168 LNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPE-AVACFL 226
Query: 191 LMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN 250
LR G +R +F+ L S + G +H L +K + N ++A Y K
Sbjct: 227 NALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCG 286
Query: 251 LIGEAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
+ EK F R+ E +D ++WN+ I+ H K L + M G R D F +A++
Sbjct: 287 EMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQT-GQRLDSFMYATV 345
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
L+A A +A+++ G ++HA +R L DV VG+ALV+MY+KCG + + + FN M RN
Sbjct: 346 LSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNS 405
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATG-IKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
SWN++I+ +A H G ALKLF MK G PD VTF+G+L+AC+HAGL++EG +F
Sbjct: 406 YSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFE 465
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA-CRLR-R 486
SM +YG++P IEHF+C+ DLLGRAG+L + E++ K P+ + ++ T+L A CR R
Sbjct: 466 SMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGR 525
Query: 487 DVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMI 546
+G++ A+ LF L+P YVLL N+YA+ G W D+ ARK +KD+ +KKE YS +
Sbjct: 526 KAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 585
Query: 547 EVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
++ F + SH I LK L+
Sbjct: 586 TMKDGVHMFVAGDKSHPDTDVIYKKLKELN 615
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 198/406 (48%), Gaps = 14/406 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S L C+ K + G +H LK+GI +V VSN ++ LYA+ G + RK+F M
Sbjct: 137 TLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM 196
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP-----NEYIFASAISACAGIQSLVK 118
E + VSW+++I G + E L ++ L N F+S +SA + +
Sbjct: 197 PEHDQVSWNSII-GALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGEL 255
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE-PNLVSFNALIAGFV 177
G+QIH +LK+ A + N+LI+ Y K G ++ E + V++N++I+G++
Sbjct: 256 GKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYI 315
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
N+ K ++ ML+ G D F +A L + L +GM +H +V+ LES+
Sbjct: 316 HNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVV 375
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
VG+ ++ +YSK + A + F + ++ SWN+ I+ + E+ L +F M D
Sbjct: 376 VGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDG 435
Query: 298 GVRPDDFTFASILAACAGLASVQHG-KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
PD TF +L+AC+ ++ G K + L + + + ++ + G +
Sbjct: 436 QTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDK 495
Query: 357 SYKLFNEM-LHRNVVSWNTIIAA--HANHR---LGGSALKLFEQMK 396
++M + NV+ W T++ A AN R LG A ++ Q++
Sbjct: 496 LEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLE 541
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 204/621 (32%), Positives = 334/621 (53%), Gaps = 53/621 (8%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER- 66
+L C + + + G S+HA V G + +V V N ++++Y +CG AR+VFDEM ER
Sbjct: 132 VLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERG 191
Query: 67 --NLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQ 120
+LVSW+++++ + Q G+ + A++ F +M + P+ + + ACA + + +G+
Sbjct: 192 VGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGK 251
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMK--------------------------VGYS--- 151
Q+H Y+L+ G FVGN+++ MY K GYS
Sbjct: 252 QVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIG 311
Query: 152 --SDALLVYG----EAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA 205
DAL ++ E E N+V+++A+IAG+ + + +VF+ M G P+ +
Sbjct: 312 RFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLV 371
Query: 206 GGLEICSVSNDLRKGMILHCLTVKCKL---ESNP----FVGNTIMALYSKFNLIGEAEKA 258
L C+++ L G HC +K L E++P V N ++ +YSK A
Sbjct: 372 SLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAM 431
Query: 259 FRLIEEKD--LISWNTFIAACSHCADYEKGLSVFKEM-SNDHGVRPDDFTFASILAACAG 315
F LI KD +++W I + + + L +F +M D+ V P+ FT + L ACA
Sbjct: 432 FDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACAR 491
Query: 316 LASVQHGKQIHAHLIRMRLNQD-VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNT 374
L +++ G+QIHA+++R R + V N L++MY+K G + + +F+ M RN VSW +
Sbjct: 492 LGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTS 551
Query: 375 IIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTY 434
++ + H G AL++F +M+ G+ PD VTF+ +L AC+H+G+V +G YFN M K +
Sbjct: 552 LMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDF 611
Query: 435 GISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERL 494
G+ P EH+ C++DLL RAG+L EA E + P+ P V LLSACR+ +V +GE
Sbjct: 612 GVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYA 671
Query: 495 AKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEK 554
A QL L+ Y LLSN+YA+ W DVA R ++K++G+KK P S ++ +
Sbjct: 672 ANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTAT 731
Query: 555 FTVAEFSHSKIGEINYMLKTL 575
F ++SH +I +L+ L
Sbjct: 732 FFAGDWSHPMSQQIYDLLRDL 752
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 131/509 (25%), Positives = 224/509 (44%), Gaps = 60/509 (11%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM-- 63
S+L H C K+L +H +L G+ D H++++Y A V +
Sbjct: 33 STLFHQC---KSLASAELIHQQLLVQGLPHD---PTHIISMYLTFNSPAKALSVLRRLHP 86
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
S + W+ +I G L+ + +M L P+ Y F + AC I S G
Sbjct: 87 SSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGA 146
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEP---NLVSFNALIAGFV 177
+HA G+ FVGN L+SMY + G +A V+ E E +LVS+N+++A ++
Sbjct: 147 SVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYM 206
Query: 178 ENQQPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
+ + ++F+ M G+ PD S L C+ +G +H ++ L +
Sbjct: 207 QGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDV 266
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
FVGN ++ +Y+K ++ EA K F ++ KD++SWN + S ++ L +F+++ +
Sbjct: 267 FVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREE 326
Query: 297 H----------------------------------GVRPDDFTFASILAACAGLASVQHG 322
G P+ T S+L+ CA ++ HG
Sbjct: 327 KIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHG 386
Query: 323 KQIHAHLIRMRLN-------QDVGVGNALVNMYAKCGLISCSYKLFNEML--HRNVVSWN 373
K+ H H I+ LN D+ V NAL++MY+KC + +F+ + R+VV+W
Sbjct: 387 KETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWT 446
Query: 374 TIIAAHANHRLGGSALKLFEQMKATG--IKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
+I +A H AL+LF QM + P++ T L AC G ++ G +
Sbjct: 447 VLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVL 506
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
+ S + CLID+ ++G + A
Sbjct: 507 RNRFESAMLFVANCLIDMYSKSGDVDAAR 535
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 197/411 (47%), Gaps = 28/411 (6%)
Query: 141 LISMYMKVGYSSDALLVYGEAFEPN---LVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
+ISMY+ + AL V P+ + +N LI V E ++++ M R G
Sbjct: 64 IISMYLTFNSPAKALSVL-RRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGW 122
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
PD ++F L+ C R G +H + E N FVGN ++++Y + A +
Sbjct: 123 RPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQ 182
Query: 258 AFRLIEEK---DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA 314
F + E+ DL+SWN+ +AA D + + +F+ M+ D G+RPD + ++L ACA
Sbjct: 183 VFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACA 242
Query: 315 GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNT 374
+ + GKQ+H + +R L +DV VGNA+V+MYAKCG++ + K+F M ++VVSWN
Sbjct: 243 SVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNA 302
Query: 375 IIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTY 434
++ ++ AL LFE+++ I+ + VT+ ++ GL E F M +
Sbjct: 303 MVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQM-RLC 361
Query: 435 GISPDIEHFTCLIDLLGRAGKLLEAEE---YTKKFPL-------GQDPIVLGTLL---SA 481
G P++ L+ AG LL +E + K+ L G D +V+ L+ S
Sbjct: 362 GSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSK 421
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKML 532
C+ + A+ +F L P V + L + G+ A ++
Sbjct: 422 CK-------SPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELF 465
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 120/480 (25%), Positives = 203/480 (42%), Gaps = 86/480 (17%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A S+ ++L C+ A +G +H L+ G+ DV V N V+++YAKCG M A KVF+
Sbjct: 231 AVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFE 290
Query: 62 EMSERNLVSWSAMISGHHQAGEH-----------------------------------LL 86
M +++VSW+AM++G+ Q G
Sbjct: 291 RMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFE 350
Query: 87 ALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKF-------GYASISF 136
AL+ F QM L PN S +S CA +L+ G++ H +++K+
Sbjct: 351 ALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLM 410
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEP---NLVSFNALIAGFVENQQPEKGFEVFKLML 193
V N+LI MY K A ++ + P ++V++ LI G ++ + + E+F ML
Sbjct: 411 VINALIDMYSKCKSPKAARAMF-DLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQML 469
Query: 194 RQG--LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP-FVGNTIMALYSKFN 250
+ ++P+ F+ + L C+ LR G +H ++ + ES FV N ++ +YSK
Sbjct: 470 QPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSG 529
Query: 251 LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
+ A F + +++ +SW + + E+ L +F EM G+ PD TF +L
Sbjct: 530 DVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQK-VGLVPDGVTFVVVL 588
Query: 311 AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVV 370
AC+ V G +N+D GV + L+S + +L M
Sbjct: 589 YACSHSGMVDQGINYFNG-----MNKDFGVVPGAEHYACMVDLLSRAGRLDEAM------ 637
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSM 430
E ++ +KP ++ LL+AC V+ GE N +
Sbjct: 638 ----------------------ELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQL 675
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 197/432 (45%), Gaps = 66/432 (15%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQ-------PDVIVSNHVLNLYAKCGKMILA 56
++ SLL C+ L G H +K + D++V N ++++Y+KC A
Sbjct: 369 TLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAA 428
Query: 57 RKVFDEMS--ERNLVSWSAMISGHHQAGEHLLALEFFSQM-----HLLPNEYIFASAISA 109
R +FD + +R++V+W+ +I G+ Q GE ALE FSQM ++PN + + A+ A
Sbjct: 429 RAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMA 488
Query: 110 CAGIQSLVKGQQIHAYSLKFGYAS-ISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVS 168
CA + +L G+QIHAY L+ + S + FV N LI MY K G A +V+ + N VS
Sbjct: 489 CARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVS 548
Query: 169 FNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV 228
+ +L+ G+ + + E+ ++F M + GL+PD +F L CS S + +G+
Sbjct: 549 WTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGI------- 601
Query: 229 KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLS 288
N + F ++ AE ++ DL+ S ++ +
Sbjct: 602 -----------NYFNGMNKDFGVVPGAEHYACMV---DLL---------SRAGRLDEAME 638
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMY 348
+ + M ++P + ++L+AC A+V+ G+ L+ + D G L N+Y
Sbjct: 639 LIRGMP----MKPTPAVWVALLSACRVYANVELGEYAANQLLELESGND-GSYTLLSNIY 693
Query: 349 --AKC--GLISCSYKLFNEML-HRNVVSW-------NTIIAAHANHRLGGSALKLF---- 392
A+C + Y + N + R SW T A +H + L
Sbjct: 694 ANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLM 753
Query: 393 EQMKATGIKPDS 404
+++KA G PD+
Sbjct: 754 QRIKALGYVPDN 765
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 206/570 (36%), Positives = 329/570 (57%), Gaps = 12/570 (2%)
Query: 17 ALQQGISLHAAVLKMGIQPDVI-VSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMI 75
L++G +H V+ G+ ++ + N ++N+YAKCG + AR+VF M++++ VSW++MI
Sbjct: 328 GLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMI 387
Query: 76 SGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYA 132
+G Q G + A+E + M +LP + S++S+CA ++ GQQIH SLK G
Sbjct: 388 TGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGID 447
Query: 133 SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ--PEKGFEVFK 190
V N+L+++Y + GY ++ ++ E + VS+N++I +++ PE F
Sbjct: 448 LNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPE-AVVCFL 506
Query: 191 LMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN 250
R G +R +F+ L S + G +H L +K + N ++A Y K
Sbjct: 507 NAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCG 566
Query: 251 LIGEAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
+ EK F R+ E +D ++WN+ I+ H K L + M G R D F +A++
Sbjct: 567 EMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQT-GQRLDSFMYATV 625
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
L+A A +A+++ G ++HA +R L DV VG+ALV+MY+KCG + + + FN M RN
Sbjct: 626 LSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNS 685
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATG-IKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
SWN++I+ +A H G ALKLFE MK G PD VTF+G+L+AC+HAGL++EG +F
Sbjct: 686 YSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFE 745
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA-CRLR-R 486
SM +YG++P IEHF+C+ D+LGRAG+L + E++ +K P+ + ++ T+L A CR R
Sbjct: 746 SMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGR 805
Query: 487 DVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMI 546
+G++ A+ LF L+P YVLL N+YA+ G W D+ ARK +KD+ +KKE YS +
Sbjct: 806 KAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 865
Query: 547 EVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
++ F + SH I LK L+
Sbjct: 866 TMKDGVHMFVAGDKSHPDADVIYKKLKELN 895
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 142/473 (30%), Positives = 235/473 (49%), Gaps = 20/473 (4%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
H+ + K + DV + N+++N Y + G + ARKVFDEM RN VSW+ ++SG+ + GE
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 84 HLLALEFFSQM---HLLPNEYIFASAISACAGIQS--LVKGQQIHAYSLKFGYASISFVG 138
H AL F M + N+Y F S + AC I S ++ G+QIH K YA + V
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 139 NSLISMYMK-VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
N LISMY K +G AL +G+ N VS+N++I+ + + F +F M G
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 198 LPDRFSFAGGLEI-CSVSN-DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
P ++F + CS++ D+R + C K L ++ FVG+ +++ ++K + A
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYA 262
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF-----TFASI- 309
K F +E ++ ++ N + E+ +F +M++ V P+ + +F
Sbjct: 263 RKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYS 322
Query: 310 LAACAGLASVQHGKQIHAHLIRMRL-NQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
LA GL + G+++H H+I L + VG+GN LVNMYAKCG I+ + ++F M ++
Sbjct: 323 LAEEVGL---KKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKD 379
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
VSWN++I + A++ ++ M+ I P S T I L++C K G+
Sbjct: 380 SVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHG 439
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
K GI ++ L+ L G L E + P D + +++ A
Sbjct: 440 ESLK-LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 233/473 (49%), Gaps = 14/473 (2%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKC-GKMILARKVFDEMSERNLVSWSAMISGHH 79
G +H + K+ D +VSN ++++Y KC G + A F ++ +N VSW+++IS +
Sbjct: 123 GRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYS 182
Query: 80 QAGEHLLALEFFSQMHL---LPNEYIFASAI-SACAGIQSLVK-GQQIHAYSLKFGYASI 134
QAG+ A FS M P EY F S + +AC+ + V+ +QI K G +
Sbjct: 183 QAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTD 242
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
FVG+ L+S + K G S A V+ + N V+ N L+ G V + E+ ++F M
Sbjct: 243 LFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNS 302
Query: 195 Q-GLLPDRFS-FAGGLEICSVSND--LRKGMILHCLTVKCKL-ESNPFVGNTIMALYSKF 249
+ P+ + S++ + L+KG +H + L + +GN ++ +Y+K
Sbjct: 303 MIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKC 362
Query: 250 NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
I +A + F + +KD +SWN+ I + + + +K M H + P FT S
Sbjct: 363 GSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRR-HDILPGSFTLISS 421
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
L++CA L + G+QIH +++ ++ +V V NAL+ +YA+ G ++ K+F+ M +
Sbjct: 422 LSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQ 481
Query: 370 VSWNTIIAAHA-NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
VSWN+II A A + R A+ F + G K + +TF +L+A + + G+ +
Sbjct: 482 VSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQ-IH 540
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+ I+ + LI G+ G++ E+ + +D + +++S
Sbjct: 541 GLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 194/405 (47%), Gaps = 12/405 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S L C+ K + G +H LK+GI +V VSN ++ LYA+ G + RK+F M
Sbjct: 417 TLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM 476
Query: 64 SERNLVSWSAMISG----HHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKG 119
E + VSW+++I E ++ + N F+S +SA + + G
Sbjct: 477 PEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELG 536
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE-PNLVSFNALIAGFVE 178
+QIH +LK A + N+LI+ Y K G ++ E + V++N++I+G++
Sbjct: 537 KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIH 596
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N+ K ++ ML+ G D F +A L + L +GM +H +V+ LES+ V
Sbjct: 597 NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVV 656
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
G+ ++ +YSK + A + F + ++ SWN+ I+ + E+ L +F+ M D
Sbjct: 657 GSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQ 716
Query: 299 VRPDDFTFASILAACAGLASVQHG-KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
PD TF +L+AC+ ++ G K + L + + + ++ + G +
Sbjct: 717 TPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKL 776
Query: 358 YKLFNEM-LHRNVVSWNTIIAA--HANHR---LGGSALKLFEQMK 396
+M + NV+ W T++ A AN R LG A ++ Q++
Sbjct: 777 EDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLE 821
>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 199/574 (34%), Positives = 326/574 (56%), Gaps = 10/574 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S++SLL+ CS+T + +H+ ++ + + N++LNLYAKCG + +F
Sbjct: 32 SLNSLLN-CSRTS--KHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSA 88
Query: 64 SE--RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
+ +N+VSW+++I+ + AL FF+ M + PN Y F++ +SAC + V
Sbjct: 89 PDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVH 148
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+Q+H+ K G+ + FV ++L+ MY K A V+ E NLVS+N +I GF++
Sbjct: 149 GEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQ 208
Query: 179 NQQPEKGFEVFKLMLRQGLLP-DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
N+ ++ FK +L + L D SF+ C+ + +L G +H + +K + + +
Sbjct: 209 NKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVY 268
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+ N++ +Y K L + K F +D+++WN I A + +YE + F M
Sbjct: 269 INNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRR-K 327
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G PD+ +++S+L +CA LA++ G IH +IR +++ V ++L+ MYAKCG + +
Sbjct: 328 GSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDA 387
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+++F E RNVV W IIAA H ++LFEQM GIKPD +TF+ +L+AC+H
Sbjct: 388 FQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHT 447
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
G V+EG YFNSM K +GI P EH+ C++DLL RAG+L A+ + + P+ D V G
Sbjct: 448 GRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGA 507
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LLSACR ++++G+ +A +LF L+P YVLL N+ +GM + R+ ++ G+
Sbjct: 508 LLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGV 567
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYM 571
+KEP S I+++ + FTV + SH K EI M
Sbjct: 568 RKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEM 601
>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 736
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 194/546 (35%), Positives = 296/546 (54%), Gaps = 6/546 (1%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM- 94
+V VS +LN+Y K G + A++VFD M RN VSW+AM+SG+ A E F M
Sbjct: 157 NVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEEAFELFRLML 216
Query: 95 ---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
L NE++ + +SA + L+ G Q+H LK G V NSL++MY K
Sbjct: 217 QKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLVTMYAKAECM 276
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
A+ V+G + E N ++++A+I G+ +N + +F M G P F+F G L C
Sbjct: 277 DAAMRVFGSSKERNSITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNAC 336
Query: 212 SVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF-RLIEEKDLISW 270
S L G HCL VK E+ +V + ++ +Y+K IG+A+ F +L + D++ W
Sbjct: 337 SDMGALVVGKQTHCLMVKLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVLW 396
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
I ++E+ L ++ M + G+ P T S+L ACA LA++ GKQ+HA ++
Sbjct: 397 TAMITGHVQNGEHEEALMLYSRM-DKQGIIPSYLTVTSVLRACACLAALDLGKQLHAQIL 455
Query: 331 RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALK 390
+ R + VG AL MY+KCG + S +F M R+V+SWN+II+ + H G AL
Sbjct: 456 KCRFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSDALD 515
Query: 391 LFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLL 450
+FE+MK G PD +TFI LL+AC+H GLV G YF +M K Y + P ++H+ C++D+L
Sbjct: 516 MFEEMKLEGTAPDHITFINLLSACSHMGLVDRGWFYFRAMTKDYNLIPTLDHYACMVDIL 575
Query: 451 GRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYV 510
RAG+L EA+++ + + +L ACR RD +G +QL L +S Y+
Sbjct: 576 SRAGQLKEAKDFIDSITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSSAYI 635
Query: 511 LLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINY 570
LLSN+YA+ W DV R +++ G+ K+ S +E+ F V E H + IN
Sbjct: 636 LLSNIYAAQRKWNDVERVRHLMRLRGVSKDLGCSWVELYNRVHVFVVGEQQHPEAENINV 695
Query: 571 MLKTLS 576
L L+
Sbjct: 696 ELIRLA 701
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 211/430 (49%), Gaps = 22/430 (5%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMIL--ARKV 59
A+ I L S + + G +LH LK G VSN ++ Y + +L A V
Sbjct: 14 AQFIEHLRCAASSDRTPRTGEALHGWALKSGAASHAPVSNSLITFYCSLPRPLLGAAYVV 73
Query: 60 FDEMSE--RNLVSWSAMI---SGHHQAGEHLLALEFFSQM-----HLLPNEYIFASAISA 109
F ++ R++ SW++++ S HH AL F M +LP+ + FA+A +A
Sbjct: 74 FADIPAALRDVASWNSLLNPLSRHHPVS----ALSHFRSMMSSPEAVLPSPHSFAAAFTA 129
Query: 110 CAGIQSLVKGQQIHAYSLKFGYASIS---FVGNSLISMYMKVGYSSDALLVYGEAFEPNL 166
A + S G HA + K + S FV +L++MY K+G SDA V+ N
Sbjct: 130 AARVPSASAGAVTHALACKLPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNA 189
Query: 167 VSFNALIAGFVENQQPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHC 225
VS+ A+++G+ + E+ FE+F+LML++ L + F L SV L G LH
Sbjct: 190 VSWAAMVSGYATGKCSEEAFELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHG 249
Query: 226 LTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEK 285
L +K L V N+++ +Y+K + A + F +E++ I+W+ I + +
Sbjct: 250 LVLKDGLVGFVSVENSLVTMYAKAECMDAAMRVFGSSKERNSITWSAMITGYAQNGEANC 309
Query: 286 GLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALV 345
+F +M + G P +FTF +L AC+ + ++ GKQ H ++++ V V +ALV
Sbjct: 310 AARMFLQM-HSSGFTPTEFTFVGVLNACSDMGALVVGKQTHCLMVKLGFETQVYVKSALV 368
Query: 346 NMYAKCGLISCSYKLFNEMLH-RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDS 404
+MYAKCG I + F+++ +VV W +I H + AL L+ +M GI P
Sbjct: 369 DMYAKCGCIGDAKDGFHQLYDVDDVVLWTAMITGHVQNGEHEEALMLYSRMDKQGIIPSY 428
Query: 405 VTFIGLLTAC 414
+T +L AC
Sbjct: 429 LTVTSVLRAC 438
>gi|359478617|ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 628
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 191/552 (34%), Positives = 324/552 (58%), Gaps = 9/552 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++ ++ C+K+ ++ GI LH+ ++K+G +V + + ++++Y KCG + A+++FD
Sbjct: 79 AHILNRMVSSCAKSGSVFVGIQLHSTIIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFD 138
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
EM RN+V+W+++ISG+ G +A+E F +M + P + ++ + C ++
Sbjct: 139 EMPHRNVVTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKL 198
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDA-LLVYGEAFEPNLVSFNALIAGFV 177
G Q+H S+K G+ VG LI +Y K G++ DA L++ E N++++ +++AG+
Sbjct: 199 GIQVHGLSMKCGFCYNIVVGTCLIDLYSK-GWNIDASRLMFDLMPERNIITWTSMVAGYA 257
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
QQP + + M R G+ + ++ L S SNDL +HC ++ LESN +
Sbjct: 258 HCQQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQVHCRIIREGLESNSY 317
Query: 238 VGNTIMALYSKFNL--IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
+ T++ +YS+ + + + K + D ISWN I S+ + E L F +M
Sbjct: 318 LEVTLVTVYSECSSSSLEDFNKVCSGVTRWDQISWNAVIGGLSNLGNGEAALKCFSKM-R 376
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
G+ D FTF S+L A ++++ GKQIHA +++ ++ V N LV+MYA+CG I+
Sbjct: 377 QAGIDMDLFTFTSVLRAIGMISTLDEGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSIN 436
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ ++F+ M +V+SWN++++ A H G A++LFEQM+ +G+KPD+ TF+ +L+AC
Sbjct: 437 DAKRVFSLMDRHDVISWNSLLSGCAYHGYGREAVELFEQMRRSGVKPDNTTFLVVLSACR 496
Query: 416 HAGLVKEGEAYFNSMEKTYGI-SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
H GL+ +G YF+ M Y + SP EH++ ++DL RAG L EAE++ P+ P V
Sbjct: 497 HVGLLDKGLEYFDLMRNDYSLESPTTEHYSSMVDLFSRAGYLSEAEDFINTMPIEPGPSV 556
Query: 475 LGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKD 534
LLSAC++ +V I R AK+L + P YVLLSN+ A+ G W +VA RK++ D
Sbjct: 557 YKALLSACQVHGNVEIAVRCAKKLLQMCPNDPVIYVLLSNVQATVGYWDNVASIRKVMCD 616
Query: 535 SGLKKEPSYSMI 546
G++KEP YS I
Sbjct: 617 RGVRKEPGYSWI 628
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 218/427 (51%), Gaps = 21/427 (4%)
Query: 98 PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV 157
P +I +S+CA S+ G Q+H+ +K G+ S ++ ++L+ MY K G S A +
Sbjct: 77 PTAHILNRMVSSCAKSGSVFVGIQLHSTIIKVGFDSNVYICSALVDMYGKCGAVSSAQRL 136
Query: 158 YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDL 217
+ E N+V++N+LI+G++ PE E+F M++ G+ P FS + L C D
Sbjct: 137 FDEMPHRNVVTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDT 196
Query: 218 RKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC 277
+ G+ +H L++KC N VG ++ LYSK I + F L+ E+++I+W + +A
Sbjct: 197 KLGIQVHGLSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLMPERNIITWTSMVAGY 256
Query: 278 SHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD 337
+HC + + ++M G+R + T+ +L++ + + H KQ+H +IR L +
Sbjct: 257 AHCQQPVAAMVLVRDMQR-LGIRLNYVTYNCLLSSFSSSNDLDHCKQVHCRIIREGLESN 315
Query: 338 VGVGNALVNMYAKCGLISCSYKLFNEML----HRNVVSWNTIIAAHANHRLGGSALKLFE 393
+ LV +Y++C S S + FN++ + +SWN +I +N G +ALK F
Sbjct: 316 SYLEVTLVTVYSECS--SSSLEDFNKVCSGVTRWDQISWNAVIGGLSNLGNGEAALKCFS 373
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT-YGISPDIEHFTCLIDLLGR 452
+M+ GI D TF +L A + EG+ + K YG + ++++ L+ + R
Sbjct: 374 KMRQAGIDMDLFTFTSVLRAIGMISTLDEGKQIHALVLKAGYGSNLNVQNG--LVSMYAR 431
Query: 453 AGKLLEAEEYTKKFPL--GQDPIVLGTLLSACRL----RRDVVIGERLAKQLFHLQPTTT 506
G + +A+ + F L D I +LLS C R V + E++ + ++P T
Sbjct: 432 CGSINDAK---RVFSLMDRHDVISWNSLLSGCAYHGYGREAVELFEQMRRS--GVKPDNT 486
Query: 507 SPYVLLS 513
+ V+LS
Sbjct: 487 TFLVVLS 493
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 126/249 (50%), Gaps = 1/249 (0%)
Query: 165 NLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILH 224
+ S N+ IA + +Q ++ + + G P + C+ S + G+ LH
Sbjct: 43 DFFSCNSHIACDTDEKQSSVDLKLLAQLQQHGSAPTAHILNRMVSSCAKSGSVFVGIQLH 102
Query: 225 CLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYE 284
+K +SN ++ + ++ +Y K + A++ F + +++++WN+ I+ H E
Sbjct: 103 STIIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVGCPE 162
Query: 285 KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNAL 344
+ +F EM G+ P F+ +++L C + + G Q+H ++ ++ VG L
Sbjct: 163 IAIELFLEMVK-VGIDPTPFSVSAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVVGTCL 221
Query: 345 VNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDS 404
+++Y+K I S +F+ M RN+++W +++A +A+ + +A+ L M+ GI+ +
Sbjct: 222 IDLYSKGWNIDASRLMFDLMPERNIITWTSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNY 281
Query: 405 VTFIGLLTA 413
VT+ LL++
Sbjct: 282 VTYNCLLSS 290
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 200/573 (34%), Positives = 316/573 (55%), Gaps = 7/573 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +L C + G +HA VL+ G +V V N ++ +YAKCG ++ ARKVFD M
Sbjct: 199 TFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGM 258
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ + +SW+AMI+GH + E LE F M + PN S A + + +
Sbjct: 259 AVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAK 318
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H +++K G+A NSLI MY +G DA ++ + +S+ A+I+G+ +N
Sbjct: 319 EMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNG 378
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
P+K EV+ LM + PD + A L C+ L G+ LH L V N
Sbjct: 379 FPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVAN 438
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA-CSHCADYEKGLSVFKEMSNDHGV 299
++ +Y+K I +A + F+ + EKD++SW++ IA C + +E L F+ M V
Sbjct: 439 ALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFE-ALYYFRYMLGH--V 495
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+P+ TF + L+ACA +++ GK+IHA+++R + + V NAL+++Y KCG S ++
Sbjct: 496 KPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWA 555
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
F+ ++VVSWN +++ H LG AL LF QM G PD VTF+ LL AC+ AG+
Sbjct: 556 QFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGM 615
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V +G F+ M + + I P+++H+ C++DLL R GKL EA + P+ D V G LL
Sbjct: 616 VIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALL 675
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
+ CR+ R V +GE AK + L+P + +VLL +LY G W VA RK +++ GL++
Sbjct: 676 NGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQ 735
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYML 572
+ S +EV+G F + SH +I EIN +L
Sbjct: 736 DNGCSWVEVKGVTHAFLTDDESHPQIKEINVVL 768
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/422 (30%), Positives = 212/422 (50%), Gaps = 7/422 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+L C +A+ G+ A + + N +L++ + G++ A +VF +M ER
Sbjct: 101 ALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPER 160
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
++ SW+ M+ G+ + G AL+ + +M + P+ Y F + C GI G+++H
Sbjct: 161 DVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVH 220
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A+ L+FG+ V N+L++MY K G A V+ + +S+NA+IAG EN + E
Sbjct: 221 AHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECE 280
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
G E+F ML + P+ + + +++ +H VK + N+++
Sbjct: 281 AGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLI 340
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+ +G+A K F +E KD +SW I+ +K L V+ M H V PDD
Sbjct: 341 QMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMEL-HNVSPDD 399
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T AS LAACA L + G ++H + V V NAL+ MYAK I + ++F
Sbjct: 400 VTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKF 459
Query: 364 MLHRNVVSWNTIIAAHA-NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
M ++VVSW+++IA NHR AL F M +KP+SVTFI L+AC G ++
Sbjct: 460 MAEKDVVSWSSMIAGFCFNHR-SFEALYYFRYMLGH-VKPNSVTFIAALSACAATGALRS 517
Query: 423 GE 424
G+
Sbjct: 518 GK 519
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 75/161 (46%), Gaps = 1/161 (0%)
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD+ + ++ C +V G + A + + +GNA+++M + G I ++++
Sbjct: 94 PDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRV 153
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F +M R+V SWN ++ + AL L+ +M G++PD TF +L C
Sbjct: 154 FAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDW 213
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ G + + +G +++ L+ + + G ++ A +
Sbjct: 214 RMGREVHAHVLR-FGFGDEVDVLNALVTMYAKCGDIVAARK 253
>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
Length = 690
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 197/580 (33%), Positives = 315/580 (54%), Gaps = 10/580 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+ I+ LL ++ +L+ G+ LHAA++K+G D +++N+++++YAKCGK+ +A +VFD
Sbjct: 5 RMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDG 64
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
M ERN+VSW+A++ G GE L F +M PNE+ ++ + AC G G
Sbjct: 65 MPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAG 122
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
QIH ++ G+ V NSL+ MY K ++ DA V+ NL ++N++I+G+
Sbjct: 123 VQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHA 182
Query: 180 QQPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHC-LTVK-CKLESNP 236
Q VF+ M R+ PD F+FA L+ CS R+G +H + V+ SN
Sbjct: 183 GQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNA 242
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
+ ++ +Y K + + A + F +E ++ I W T I + ++ + +F+ +
Sbjct: 243 ILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSS 302
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
GVR D +S++A A A V+ GKQ+H + + DV V N+LV+MY KCGL
Sbjct: 303 -GVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGE 361
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ + F EM RNVVSW +I H G A+ LFE+M+ G++ D V ++ LL+AC+H
Sbjct: 362 AGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSH 421
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
+GLV E YF+ + + + P EH+ C++DLLGRAG+L EA+E P+ V
Sbjct: 422 SGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQ 481
Query: 477 TLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSG 536
TLLSACR+ +DV +G + L + YV+LSN+ A G W + G R ++ G
Sbjct: 482 TLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKG 541
Query: 537 LKKEPSYSMIEVQGTFEKF-TVAEFSHSKIGEINYMLKTL 575
L+K+ S EV F + +H + G+I L+ +
Sbjct: 542 LRKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREV 581
>gi|296087156|emb|CBI33530.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 199/549 (36%), Positives = 311/549 (56%), Gaps = 6/549 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S +L C+ L+ G+S+H ++K+ I +++ N +L+LY K G + A ++FD M
Sbjct: 63 SQILQECTDAGDLRTGMSVHTYLVKLNINGFILIWNKLLSLYLKFGHIHHAHQLFDTMPR 122
Query: 66 RNLVSWSAMISGHHQAGEHLLAL-EFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
R++VS++ MIS + L L +S+M + PN FA I AC G+ +L
Sbjct: 123 RDVVSFNTMISASVRNNYDALDLVGLYSKMKKEDVKPNHITFAGLIGACDGLIALRLRGI 182
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
HA++++ G +S FVG+SL+ Y K DA+ + E E +LVS+N +I G N
Sbjct: 183 FHAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEIMELDLVSWNIMIDGCARNNS 242
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
E +F ML+ + D F+ ++ CS DL+ GM H +K L + N
Sbjct: 243 KEHAVRMFSQMLKGNVRVDGFTLTSIIKTCSKPGDLKHGMQFHGSAIKLGLAHETPIYNA 302
Query: 242 IMALYSKFNL-IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +YSK + K F I E ++ISW I+ E+ + +FKEM GVR
Sbjct: 303 LITMYSKCEKGVASPVKIFGSISEPNIISWTAMISGFMQNEQNEEAIGLFKEMLR-LGVR 361
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+DF+F+SIL LA+++ GKQIHA +I+ D+ V NAL++MY+KCG + ++ +
Sbjct: 362 ENDFSFSSILPVYGNLANLEQGKQIHARIIKSWFGLDLSVNNALIDMYSKCGSLEDAHLV 421
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F +M +VVS T+I ++ H G AL++ +MK+ G+ PD VTF+G L AC+H GLV
Sbjct: 422 FMKMGKHDVVSCTTMIMSYGQHGKGKEALEILAEMKSEGLVPDGVTFLGCLYACSHGGLV 481
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+EG F M + + + P EHF C++D+LGRAG+L EAE + + + D +V TLL
Sbjct: 482 EEGVRVFKIMIEDHNLKPKREHFACVVDMLGRAGRLNEAENFIDEMGIESDVLVWETLLG 541
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ ++V+GE+ A+++ LQP PYVLL+N+YA G W D R+ L GLKK+
Sbjct: 542 ACRVHGEMVLGEKSAQKIMELQPGRHGPYVLLANIYAERGSWEDKVMVREKLVSHGLKKQ 601
Query: 541 PSYSMIEVQ 549
S + ++
Sbjct: 602 VGCSWVALE 610
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 177/359 (49%), Gaps = 4/359 (1%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
F+ + C L G +H Y +K + N L+S+Y+K G+ A ++
Sbjct: 62 FSQILQECTDAGDLRTGMSVHTYLVKLNINGFILIWNKLLSLYLKFGHIHHAHQLFDTMP 121
Query: 163 EPNLVSFNALIAGFVENQQPEKGF-EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
++VSFN +I+ V N ++ M ++ + P+ +FAG + C LR
Sbjct: 122 RRDVVSFNTMISASVRNNYDALDLVGLYSKMKKEDVKPNHITFAGLIGACDGLIALRLRG 181
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
I H TV+C L SN FVG++++ Y+K + +A KAF I E DL+SWN I C+
Sbjct: 182 IFHAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEIMELDLVSWNIMIDGCARNN 241
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
E + +F +M + VR D FT SI+ C+ ++HG Q H I++ L + +
Sbjct: 242 SKEHAVRMFSQMLKGN-VRVDGFTLTSIIKTCSKPGDLKHGMQFHGSAIKLGLAHETPIY 300
Query: 342 NALVNMYAKCGL-ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGI 400
NAL+ MY+KC ++ K+F + N++SW +I+ + A+ LF++M G+
Sbjct: 301 NALITMYSKCEKGVASPVKIFGSISEPNIISWTAMISGFMQNEQNEEAIGLFKEMLRLGV 360
Query: 401 KPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+ + +F +L + +++G+ + K++ D+ LID+ + G L +A
Sbjct: 361 RENDFSFSSILPVYGNLANLEQGKQIHARIIKSW-FGLDLSVNNALIDMYSKCGSLEDA 418
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 205/403 (50%), Gaps = 17/403 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + L+ C AL+ HA ++ G+ + V + +++ YAK K+ A K F+E+
Sbjct: 163 TFAGLIGACDGLIALRLRGIFHAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEI 222
Query: 64 SERNLVSWSAMISG--HHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
E +LVSW+ MI G + + EH A+ FSQM ++ + + S I C+ L
Sbjct: 223 MELDLVSWNIMIDGCARNNSKEH--AVRMFSQMLKGNVRVDGFTLTSIIKTCSKPGDLKH 280
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKV--GYSSDALLVYGEAFEPNLVSFNALIAGF 176
G Q H ++K G A + + N+LI+MY K G +S + ++G EPN++S+ A+I+GF
Sbjct: 281 GMQFHGSAIKLGLAHETPIYNALITMYSKCEKGVAS-PVKIFGSISEPNIISWTAMISGF 339
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
++N+Q E+ +FK MLR G+ + FSF+ L + +L +G +H +K +
Sbjct: 340 MQNEQNEEAIGLFKEMLRLGVRENDFSFSSILPVYGNLANLEQGKQIHARIIKSWFGLDL 399
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
V N ++ +YSK + +A F + + D++S T I + ++ L + EM ++
Sbjct: 400 SVNNALIDMYSKCGSLEDAHLVFMKMGKHDVVSCTTMIMSYGQHGKGKEALEILAEMKSE 459
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR-MRLNQDVGVGNALVNMYAKCGLIS 355
G+ PD TF L AC+ V+ G ++ +I L +V+M + G ++
Sbjct: 460 -GLVPDGVTFLGCLYACSHGGLVEEGVRVFKIMIEDHNLKPKREHFACVVDMLGRAGRLN 518
Query: 356 CSYKLFNEM-LHRNVVSWNTIIAA---HANHRLG-GSALKLFE 393
+ +EM + +V+ W T++ A H LG SA K+ E
Sbjct: 519 EAENFIDEMGIESDVLVWETLLGACRVHGEMVLGEKSAQKIME 561
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 195/568 (34%), Positives = 318/568 (55%), Gaps = 4/568 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + +L C+ + G LH V+ G++ D V+N +L +YAKCG + AR++FD M
Sbjct: 250 TFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMM 309
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ +LV+W+ MISG+ Q G A F +M + P+ F+S + + +L +G+
Sbjct: 310 PKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGK 369
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+IH Y ++ G + F+ ++LI +Y K A ++ + ++V A+I+G+V N
Sbjct: 370 EIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNG 429
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E+F+ +L++ + + + A L C+ L G LH +K + +VG+
Sbjct: 430 MNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGS 489
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
IM +Y+K + A + F I +KD + WN+ I +CS E+ + +F++M G +
Sbjct: 490 AIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGM-AGTK 548
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D + ++ L+ACA L ++ +GK+IHA ++R D+ +AL++MY+KCG + + ++
Sbjct: 549 YDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRV 608
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+ M +N VSWN+IIAA+ NH +L LF M GI+PD VTF+ +++AC HAG V
Sbjct: 609 FDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQV 668
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG YF M + GI +EH+ C++DL GRAG+L EA P D V GTLL
Sbjct: 669 DEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLG 728
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACRL +V + E ++ LF L P + YVLLSN++A+ G W V R ++K+ G++K
Sbjct: 729 ACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKV 788
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
P S I+V T F A+ SH + +I
Sbjct: 789 PGCSWIDVNNTTHMFVAADRSHPQSSQI 816
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/486 (26%), Positives = 247/486 (50%), Gaps = 8/486 (1%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
+A + S+L C+ L QG HA +L GI + I+ +L +Y CG + A+ +F
Sbjct: 45 LAPQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIF 104
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLV 117
++ W+ MI G G+ AL F+ +M LP++Y F I AC G+ S+
Sbjct: 105 YQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVA 164
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+ +H G+ FVG+SLI Y + G DA ++ + V +N ++ G+V
Sbjct: 165 LGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYV 224
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+N + VF M R P+ +FA L +C+ + G LH L V LE +
Sbjct: 225 KNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSP 284
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V NT++A+Y+K + +A + F ++ + DL++WN I+ ++ +F EM +
Sbjct: 285 VANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAR 344
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
++PD TF+S L + A+++ GK+IH ++IR ++ DV + +AL+++Y KC + +
Sbjct: 345 -MKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMA 403
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC-NH 416
K+F++ ++V +I+ + + + +AL++F + ++ +SVT +L AC
Sbjct: 404 RKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGL 463
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
A L E + + ++ +G S + + ++D+ + G+L A + +D +
Sbjct: 464 AALTLGKELHGHILKNGHGGSCYVG--SAIMDMYAKCGRLDLAHQTFIGIS-DKDAVCWN 520
Query: 477 TLLSAC 482
+++++C
Sbjct: 521 SMITSC 526
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 200/573 (34%), Positives = 316/573 (55%), Gaps = 7/573 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +L C + G +HA VL+ G +V V N ++ +YAKCG ++ ARKVFD M
Sbjct: 199 TFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGM 258
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ + +SW+AMI+GH + E LE F M + PN S A + + +
Sbjct: 259 AVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAK 318
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H +++K G+A NSLI MY +G DA ++ + +S+ A+I+G+ +N
Sbjct: 319 EMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNG 378
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
P+K EV+ LM + PD + A L C+ L G+ LH L V N
Sbjct: 379 FPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVAN 438
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA-CSHCADYEKGLSVFKEMSNDHGV 299
++ +Y+K I +A + F+ + EKD++SW++ IA C + +E L F+ M V
Sbjct: 439 ALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFE-ALYYFRYMLGH--V 495
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+P+ TF + L+ACA +++ GK+IHA+++R + + V NAL+++Y KCG S ++
Sbjct: 496 KPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWA 555
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
F+ ++VVSWN +++ H LG AL LF QM G PD VTF+ LL AC+ AG+
Sbjct: 556 QFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGM 615
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V +G F+ M + + I P+++H+ C++DLL R GKL EA + P+ D V G LL
Sbjct: 616 VIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALL 675
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
+ CR+ R V +GE AK + L+P + +VLL +LY G W VA RK +++ GL++
Sbjct: 676 NGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQ 735
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYML 572
+ S +EV+G F + SH +I EIN +L
Sbjct: 736 DNGCSWVEVKGVTHAFLTDDESHPQIKEINVVL 768
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/422 (30%), Positives = 212/422 (50%), Gaps = 7/422 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+L C +A+ G+ A + + N +L++ + G++ A +VF +M ER
Sbjct: 101 ALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPER 160
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
++ SW+ M+ G+ + G AL+ + +M + P+ Y F + C GI G+++H
Sbjct: 161 DVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVH 220
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A+ L+FG+ V N+L++MY K G A V+ + +S+NA+IAG EN + E
Sbjct: 221 AHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECE 280
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
G E+F ML + P+ + + +++ +H VK + N+++
Sbjct: 281 AGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLI 340
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+ +G+A K F +E KD +SW I+ +K L V+ M H V PDD
Sbjct: 341 QMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMEL-HNVSPDD 399
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T AS LAACA L + G ++H + V V NAL+ MYAK I + ++F
Sbjct: 400 VTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKF 459
Query: 364 MLHRNVVSWNTIIAAHA-NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
M ++VVSW+++IA NHR AL F M +KP+SVTFI L+AC G ++
Sbjct: 460 MAEKDVVSWSSMIAGFCFNHR-SFEALYYFRYMLGH-VKPNSVTFIAALSACAATGALRS 517
Query: 423 GE 424
G+
Sbjct: 518 GK 519
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 75/161 (46%), Gaps = 1/161 (0%)
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD+ + ++ C +V G + A + + +GNA+++M + G I ++++
Sbjct: 94 PDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRV 153
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F +M R+V SWN ++ + AL L+ +M G++PD TF +L C
Sbjct: 154 FAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDW 213
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ G + + +G +++ L+ + + G ++ A +
Sbjct: 214 RMGREVHAHVLR-FGFGDEVDVLNALVTMYAKCGDIVAARK 253
>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
gi|194688780|gb|ACF78474.1| unknown [Zea mays]
gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
Length = 695
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 192/585 (32%), Positives = 308/585 (52%), Gaps = 13/585 (2%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
K I+ LL +++ +L+ G+ LH A+ KMG D ++ N+++++Y KCG++ LA +VF
Sbjct: 5 KMIAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGG 64
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISACAGIQSLVK 118
M +RN+VSW+A++ G + G+ L +M PNEY ++++ AC +
Sbjct: 65 MRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAA 124
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY-GEAFEPNLVSFNALIAGFV 177
G IH ++ GY V +SL+ +Y K G DA V+ G + ++NA+++G+
Sbjct: 125 GVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYA 184
Query: 178 ENQQPEKGFEVFKLMLR-QGL-LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE-- 233
VF+ M R +G PD F+FA L+ CS R+G +H
Sbjct: 185 HAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTA 244
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
SN + ++ +Y K + A + F +E K++I W + + + L +F+
Sbjct: 245 SNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRF 304
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
G RPD +S++ A A V+ G+Q+H + I+ DV GN++V+MY KCGL
Sbjct: 305 WRS-GARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGL 363
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ ++F EM NVVSW T++ H LG A+ LFE+M+A G++PD VT++ LL+A
Sbjct: 364 PDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSA 423
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C+HAGLV E YF+ + + + P EH+ C++DLLGRAG+L EA + + P+
Sbjct: 424 CSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVG 483
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
V TLLSACR+ +DV +G L + YV LSN+ A G W + R ++
Sbjct: 484 VWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAMR 543
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVA---EFSHSKIGEINYMLKTL 575
GLKK+ S +EV F E +H + G+I +L+ +
Sbjct: 544 RRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRDM 588
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 191/552 (34%), Positives = 316/552 (57%), Gaps = 5/552 (0%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L C + G +H +LK G+ DV V + ++N+YAKC + + A K+FDE +R+
Sbjct: 112 VLKACGGLGRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRD 171
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHA 124
+ W+A+IS + + G+ +AL+ F +M L PN F +S+C + +L +G+++H
Sbjct: 172 VGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHR 231
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
++ +FV ++L+ MY K G A V+ + N +++NA+I G+
Sbjct: 232 ELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRS 291
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
E+ M +G P + + S S LR G +H ++ +++ + F+ +++
Sbjct: 292 CIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLID 351
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
Y K + AE FR I + +++SWN I+ ++ + L ++ M +H V+PD
Sbjct: 352 FYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMK-EHHVKPDAL 410
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
TF+S L+AC+ LA++ G+++H +I +L + V AL++MYAKCG + + KLF+++
Sbjct: 411 TFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQL 470
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
R++VSW ++I A+ +H AL+LF++M+ ++ DSVTF+ +L+AC+HAGLV EG
Sbjct: 471 PKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGY 530
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI-VLGTLLSACR 483
YFN M Y I P IEH++CLIDLLGRAG+L EA E ++ + I +L TL SAC
Sbjct: 531 MYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACL 590
Query: 484 LRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSY 543
L + V+G ++ K L + P S Y+LLSN+YAS W +V R+ +K+ GLKK P
Sbjct: 591 LHNNFVLGIQIGKMLIEVDPDDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLKKSPGC 650
Query: 544 SMIEVQGTFEKF 555
S IE+ F
Sbjct: 651 SWIEINQRIHPF 662
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 240/473 (50%), Gaps = 15/473 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S L C+ +K L+QG +H + G Q ++++S ++ Y C A VF
Sbjct: 5 TLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQTN 64
Query: 64 SERNLVS-WSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVK 118
VS W+A++S + + AL+ F Q+ ++ P+ Y + + AC G+ ++
Sbjct: 65 DCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIY 124
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G++IH + LK G FVG+SL++MY K DA+ ++ E + ++ +NA+I+ + +
Sbjct: 125 GRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFK 184
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ + E + F M G P+ +F + C+ +L +G +H ++ ++ + FV
Sbjct: 185 DGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFV 244
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
+ ++ +Y K + A++ F I K+ I+WN I S D + + M ND G
Sbjct: 245 LSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRM-NDEG 303
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+P T SI+ A + ++HGK IH +++R R++ D+ + +L++ Y KCG +S +
Sbjct: 304 TKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAE 363
Query: 359 KLFNEMLHRNVVSWNTIIAAHA---NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+F + VVSWN +I+ H NH AL +++ MK +KPD++TF L+AC+
Sbjct: 364 TIFRTISKNEVVSWNVMISGHVMVGNHI---QALHIYDNMKEHHVKPDALTFSSTLSACS 420
Query: 416 H-AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
A L K E ++ + + + L+D+ + G + EA + + P
Sbjct: 421 QLAALDKGRELHYCIINHKLEANEIV--MGALLDMYAKCGDVDEARKLFHQLP 471
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 167/323 (51%), Gaps = 10/323 (3%)
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
D + L C+ S L++G ++H C +SN + +++ Y + AE F
Sbjct: 2 DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVF 61
Query: 260 RLIE-EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
+ + D+ WN ++A ++ + + L +F +++ + VRPD +T+ +L AC GL
Sbjct: 62 QTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGR 121
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA 378
V +G++IH HL++ L DV VG++L+NMYAKC + KLF+E R+V WN +I+
Sbjct: 122 VIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISC 181
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG-EAYFNSMEKTYGIS 437
+ ALK F++MK G +P+SVTF ++++C ++ G E + +E+ I
Sbjct: 182 YFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERR--IL 239
Query: 438 PDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQ 497
D + L+D+ G+ G L A+E +K P ++ I +++ L+ D +
Sbjct: 240 LDAFVLSALVDMYGKCGCLEMAKEVFEKIP-RKNAITWNAMITGYSLKGD---SRSCIEL 295
Query: 498 LFHLQPTTTSPYV--LLSNLYAS 518
L + T P + L S +YAS
Sbjct: 296 LMRMNDEGTKPTLMTLTSIIYAS 318
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + SS L CS+ AL +G LH ++ ++ + IV +L++YAKCG + ARK+F
Sbjct: 409 ALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFH 468
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACA 111
++ +R+LVSW++MI + G+ AL F +M L + F + +SAC+
Sbjct: 469 QLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACS 521
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 205/579 (35%), Positives = 324/579 (55%), Gaps = 15/579 (2%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L CS L G ++HA +G+ D+ VS +++LY +C + A VF +M R+
Sbjct: 105 VLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRD 164
Query: 68 LVSWSAMISGH------HQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQ 121
+V+W+AM++G+ H A HLL ++ + L PN S + A +L +G
Sbjct: 165 VVAWNAMLAGYANHGMYHHAIAHLLDMQ--DRGGLRPNASTLVSLLPLLAQHGALFQGTS 222
Query: 122 IHAYSLKFGYASIS----FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+HAY L+ Y + +G +L+ MY K + A V+ N V+++ALI GFV
Sbjct: 223 VHAYCLR-AYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFV 281
Query: 178 ENQQPEKGFEVFKLMLRQGL-LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
+ + F +FK ML +G+ S A L +C+ DLR G LH L K + ++
Sbjct: 282 LCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADL 341
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
GN+++++Y+K LI EA F I KD IS+ ++ E+ VFK+M
Sbjct: 342 TAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQAC 401
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
+ V+PD T S++ AC+ LA++QHG+ H +I L + + N+L++MYAKCG I
Sbjct: 402 N-VQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDL 460
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
S ++F++M R++VSWNT+IA + H LG A LF MK G +PD VTFI L+ AC+H
Sbjct: 461 SRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSH 520
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
+GLV EG+ +F++M YGI P +EH+ C++DLL R G L EA ++ + PL D V G
Sbjct: 521 SGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWG 580
Query: 477 TLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSG 536
LL ACR+ +++ +G+++++ + L P T +VLLSN++++ G + + A R + K G
Sbjct: 581 ALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKG 640
Query: 537 LKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KK P S IE+ G+ F + SH +I + L +
Sbjct: 641 FKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNI 679
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 221/437 (50%), Gaps = 9/437 (2%)
Query: 51 GKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAI 107
G++ LAR+VFD + + +++A+I + G A++ + M + PN+Y F +
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 108 SACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLV 167
AC+ + L G+ IHA++ G + FV +LI +Y++ A V+ + ++V
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166
Query: 168 SFNALIAGFVENQQPEKGF-EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCL 226
++NA++AG+ + + + R GL P+ + L + + L +G +H
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226
Query: 227 TVKCKLESNP---FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY 283
++ L+ N +G ++ +Y+K + A + F + ++ ++W+ I C
Sbjct: 227 CLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRM 286
Query: 284 EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA 343
+ ++FK+M + + AS L CA LA ++ G Q+HA L + ++ D+ GN+
Sbjct: 287 TEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNS 346
Query: 344 LVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPD 403
L++MYAK GLI+ + LF+E+ ++ +S+ +++ + + A +F++M+A ++PD
Sbjct: 347 LLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPD 406
Query: 404 SVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYT 463
T + L+ AC+H ++ G S+ G++ + LID+ + G++ + +
Sbjct: 407 IATMVSLIPACSHLAALQHGRCSHGSV-IIRGLALETSICNSLIDMYAKCGRIDLSRQVF 465
Query: 464 KKFPLGQDPIVLGTLLS 480
K P +D + T+++
Sbjct: 466 DKMP-ARDIVSWNTMIA 481
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 203/414 (49%), Gaps = 21/414 (5%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGI---QPDVIVSNHVLNLYAKCGKMILARK 58
A ++ SLL ++ AL QG S+HA L+ + + V++ +L++YAKC ++ A +
Sbjct: 201 ASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACR 260
Query: 59 VFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYI----FASAISACAGIQ 114
VF M+ RN V+WSA+I G A F M + ++ ASA+ CA +
Sbjct: 261 VFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLA 320
Query: 115 SLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIA 174
L G Q+HA K G + GNSL+SMY K G ++A +++ E + +S+ AL++
Sbjct: 321 DLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLS 380
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
G+V+N + E+ F VFK M + PD + + CS L+ G H + L
Sbjct: 381 GYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLAL 440
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
+ N+++ +Y+K I + + F + +D++SWNT IA ++ ++F M
Sbjct: 441 ETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMK 500
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQ-----IHAHLIRMRLNQDVGVGNALVNMYA 349
N G PDD TF ++AAC+ V GK H + I R+ + +V++ A
Sbjct: 501 N-QGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI----CMVDLLA 555
Query: 350 KCGLISCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSALKLFEQMKATG 399
+ G + +Y+ M L +V W ++ A H N LG ++ +++ G
Sbjct: 556 RGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEG 609
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 207/612 (33%), Positives = 322/612 (52%), Gaps = 79/612 (12%)
Query: 41 NHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG----------------------- 77
N +L+ YA+ G + AR+VFD M RN S++A++S
Sbjct: 54 NTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPDPDQC 113
Query: 78 -----------HHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
H + G+ AL F + MH + N Y FASA+SACA ++ G+Q+H
Sbjct: 114 SYNAVVAALAQHGRGGD---ALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVH 170
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A K + S ++G +L+ MY K +A V+ E N+VS+N+LI + +N +
Sbjct: 171 ALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVD 230
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC-KLESNPFVGNTI 242
+ +F M++ G +PD + A + C+ R+G +H VK + + + N +
Sbjct: 231 EALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNAL 290
Query: 243 MALYSK----------FNL---------------------IGEAEKAFRLIEEKDLISWN 271
+ +Y+K F+ +G+A+ F + EK++++WN
Sbjct: 291 VDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWN 350
Query: 272 TFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
IA +H ++ E+ L +F + + V P +T+ ++L ACA LA++Q G+Q H H+++
Sbjct: 351 VLIATYAHNSEEEEALRLFVRLKRE-SVWPTHYTYGNVLNACANLANLQLGQQAHVHVLK 409
Query: 332 --MRLNQ----DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
R + DV VGN+LV+MY K G IS K+F M R+ VSWN +I +A +
Sbjct: 410 EGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRA 469
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
AL LFE+M + +PDSVT IG+L+AC H+GLVKEG YF SM + +GI P +H+TC
Sbjct: 470 KDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTC 529
Query: 446 LIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTT 505
+IDLLGRAG L E EE + P+ D ++ +LL ACRL +++ +GE A +LF L P
Sbjct: 530 MIDLLGRAGHLKEVEELIENMPMEPDAVLWASLLGACRLHKNIDMGEWAAGKLFELDPDN 589
Query: 506 TSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKI 565
+ PYVLLSN+YA G W DV R+ +K G+ K+P S IE+ F + H
Sbjct: 590 SGPYVLLSNMYAELGKWADVFRVRRSMKHRGVSKQPGCSWIEIGRKVNVFLARDNIHPCR 649
Query: 566 GEINYMLKTLSL 577
EI+ L+ + +
Sbjct: 650 NEIHDTLRIIQM 661
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 125/457 (27%), Positives = 214/457 (46%), Gaps = 68/457 (14%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A S +S L C+ KA + G +HA V K DV + ++++YAKC + A+KVFD
Sbjct: 147 AYSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFD 206
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
M ERN+VSW+++I+ + Q G AL F +M +P+E AS +SACAG+ + +
Sbjct: 207 AMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGRE 266
Query: 119 GQQIHAYSLKFG-YASISFVGNSLISMYMKVGYS-------------------------- 151
G+Q+H +K + + N+L+ MY K G +
Sbjct: 267 GRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYA 326
Query: 152 -----SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAG 206
DA V+ + E N+V++N LIA + N + E+ +F + R+ + P +++
Sbjct: 327 KSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGN 386
Query: 207 GLEICSVSNDLRKGMILHCLTVK------CKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
L C+ +L+ G H +K ES+ FVGN+++ +Y K I + K F
Sbjct: 387 VLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFE 446
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEM--SNDHGVRPDDFTFASILAACAGLAS 318
+ +D +SWN I + + L +F+ M SN+ RPD T +L+AC
Sbjct: 447 RMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNE---RPDSVTMIGVLSACGHSGL 503
Query: 319 VQHGKQIHAHLIRMRLNQDVGV------GNALVNMYAKCGLISCSYKLFNEM-LHRNVVS 371
V+ G++ + +D G+ ++++ + G + +L M + + V
Sbjct: 504 VKEGRRYF-----QSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVL 558
Query: 372 WNTIIAA---HANHRLG-GSALKLFEQMKATGIKPDS 404
W +++ A H N +G +A KLFE + PD+
Sbjct: 559 WASLLGACRLHKNIDMGEWAAGKLFE------LDPDN 589
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 212/627 (33%), Positives = 324/627 (51%), Gaps = 75/627 (11%)
Query: 25 HAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGH------ 78
H VLK + + + N +++ YA+ G++ AR+VFD + RN S++A++S +
Sbjct: 40 HGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYARLGRP 99
Query: 79 ---------------------------HQAGEHLLALEFFSQMH---LLPNEYIFASAIS 108
H G AL F + MH + N Y FASA+S
Sbjct: 100 DEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFASALS 159
Query: 109 ACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVS 168
ACA + L G+Q+H + +A +G +L+ MY K DA V+ E N+VS
Sbjct: 160 ACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERNVVS 219
Query: 169 FNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS---------------V 213
+N+LI + +N + +F M+ G PD + + + C+ V
Sbjct: 220 WNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMV 279
Query: 214 SND-LRKGMILHCLTV------------KCKLESNP---FVGNT-IMALYSKFNLIGEAE 256
D LR M+L+ V +C +S P V T I+A Y+K + +A+
Sbjct: 280 KRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQ 339
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
F + EK++I+WN IAA + + E+ + +F ++ D + P +T+ ++L AC +
Sbjct: 340 VVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRD-SIWPTHYTYGNVLNACGNI 398
Query: 317 ASVQHGKQIHAHLIR--MRLN----QDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVV 370
A +Q G+Q H H+++ R + DV VGN+LV+MY K G I K+F M R+ V
Sbjct: 399 AVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNV 458
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSM 430
SWN +I +A + AL LFE+M + PDSVT IG+L+AC H+GLV EG +F+ M
Sbjct: 459 SWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFM 518
Query: 431 EKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVI 490
+ +GI+P +H+TC++DLLGRAG L EAEE K P D ++ +LL ACRL ++V +
Sbjct: 519 TEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLHKNVEL 578
Query: 491 GERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQG 550
GER A +LF L P + PYVLLSN+YA G W DV R+ +KD G+ K+P S IE+
Sbjct: 579 GERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDRGVSKQPGCSWIEIGS 638
Query: 551 TFEKFTVAEFSHSKIGEINYMLKTLSL 577
F + H EI+ L+ + +
Sbjct: 639 KMNVFLARDNRHPCRNEIHSTLRIIQM 665
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 211/446 (47%), Gaps = 62/446 (13%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A S +S L C+ K L+ G +H V + DV + ++++YAKC + + AR+VFD
Sbjct: 151 AYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFD 210
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
M ERN+VSW+++I+ + Q G AL F +M P+E +S +SACAG+ + +
Sbjct: 211 AMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAERE 270
Query: 119 GQQIHAYSLKFGYASISFV-GNSLISMYMKVGYS-------------------------- 151
G+Q+HA+ +K V N+L+ MY K G +
Sbjct: 271 GRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYA 330
Query: 152 -----SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAG 206
DA +V+ + E N++++N LIA + +N + E+ +F + R + P +++
Sbjct: 331 KSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGN 390
Query: 207 GLEICSVSNDLRKGMILHCLTVKCKL------ESNPFVGNTIMALYSKFNLIGEAEKAFR 260
L C L+ G H +K ES+ FVGN+++ +Y K I + K F
Sbjct: 391 VLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFE 450
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEM--SNDHGVRPDDFTFASILAACAGLAS 318
+ +D +SWN I + + L +F+ M SN++ PD T +L+AC
Sbjct: 451 RMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNEN---PDSVTMIGVLSACGHSGL 507
Query: 319 VQHGKQIHAHLIRMRLNQDVGVG------NALVNMYAKCGLISCSYKLFNEM-LHRNVVS 371
V G++ H H + +D G+ +V++ + G + + +L +M + V
Sbjct: 508 VDEGRR-HFHF----MTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVL 562
Query: 372 WNTIIAA---HANHRLG-GSALKLFE 393
W +++ A H N LG +A +LFE
Sbjct: 563 WASLLGACRLHKNVELGERTAGRLFE 588
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 196/579 (33%), Positives = 317/579 (54%), Gaps = 7/579 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++ ++LL C+ L G ++HA + G+ + I S + N+Y KC + AR+VFD
Sbjct: 17 RTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDR 76
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH-----LLPNEYIFASAISACAGIQSLV 117
M R+ V+W+A+++G+ + G A+E +M P+ S + ACA ++L
Sbjct: 77 MPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALH 136
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+++HA++L+ G + V +++ Y K G A V+ N VS+NA+I G+
Sbjct: 137 ACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYA 196
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+N + +F M+++G+ S L+ C L + +H L V+ L SN
Sbjct: 197 DNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVS 256
Query: 238 VGNTIMALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
V N ++ Y+K A + F L +K ISWN I + E +F M +
Sbjct: 257 VTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLE 316
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
+ VRPD FT S++ A A ++ + IH + IR +L+QDV V AL++MY+KCG +S
Sbjct: 317 N-VRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSI 375
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ +LF+ R+V++WN +I + +H G +A++LFE+MK TG P+ TF+ +L AC+H
Sbjct: 376 ARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSH 435
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
AGLV EG+ YF SM+K YG+ P +EH+ ++DLLGRAGKL EA + K P+ V G
Sbjct: 436 AGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYG 495
Query: 477 TLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSG 536
+L AC+L ++V + E A+ +F L P +VLL+N+YA+ MW DVA R ++ G
Sbjct: 496 AMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKG 555
Query: 537 LKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
L+K P +S+I+++ F +H +I L L
Sbjct: 556 LQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKL 594
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 204/621 (32%), Positives = 333/621 (53%), Gaps = 53/621 (8%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER- 66
+L C + + + G S+HA V G + +V V N ++++Y +CG AR+VFDEM ER
Sbjct: 151 VLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERG 210
Query: 67 --NLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQ 120
+LVSW+++++ + Q G+ + A++ F +M + P+ + + ACA + + +G+
Sbjct: 211 VGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGK 270
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMK--------------------------VGYS--- 151
Q+H Y+L+ G FVGN+++ MY K GYS
Sbjct: 271 QVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIG 330
Query: 152 --SDALLVYG----EAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA 205
DAL ++ E E N+V+++A+IAG+ + + +VF+ ML G P+ +
Sbjct: 331 RFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLV 390
Query: 206 GGLEICSVSNDLRKGMILHCLTVKCKL---ESNP----FVGNTIMALYSKFNLIGEAEKA 258
L C+ + L G HC +K L E++P V N ++ +YSK A
Sbjct: 391 SLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAM 450
Query: 259 FRLIEEKD--LISWNTFIAACSHCADYEKGLSVFKEM-SNDHGVRPDDFTFASILAACAG 315
F LI KD +++W I + + + L +F +M D+ V P+ FT + L ACA
Sbjct: 451 FDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACAR 510
Query: 316 LASVQHGKQIHAHLIRMRLNQD-VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNT 374
L +++ G+QIHA+++R R + V N L++MY+K G + + +F+ M RN VSW +
Sbjct: 511 LGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTS 570
Query: 375 IIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTY 434
++ + H G AL++F +M+ + PD VTF+ +L AC+H+G+V +G YFN M K +
Sbjct: 571 LMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDF 630
Query: 435 GISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERL 494
G+ P EH+ C++DLL RAG+L EA E + P+ P V LLSACR+ +V +GE
Sbjct: 631 GVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYA 690
Query: 495 AKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEK 554
A QL L+ Y LLSN+YA+ W DVA R ++K++G+KK P S ++ +
Sbjct: 691 ANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTAT 750
Query: 555 FTVAEFSHSKIGEINYMLKTL 575
F ++SH +I +L+ L
Sbjct: 751 FFAGDWSHPMSQQIYDLLRDL 771
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/509 (25%), Positives = 223/509 (43%), Gaps = 60/509 (11%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM-- 63
S+L H C K+L H +L G+ D H++++Y A V +
Sbjct: 52 STLFHQC---KSLASAELTHQQLLVQGLPHD---PTHIISMYLTFNSPAKALSVLRRLHP 105
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
S + W+ +I G L+ + +M L P+ Y F + AC I S G
Sbjct: 106 SSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGA 165
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEP---NLVSFNALIAGFV 177
+HA G+ FVGN L+SMY + G +A V+ E E +LVS+N+++A ++
Sbjct: 166 SVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYM 225
Query: 178 ENQQPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
+ + ++F+ M G+ PD S L C+ +G +H ++ L +
Sbjct: 226 QGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDV 285
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
FVGN ++ +Y+K ++ EA K F ++ KD++SWN + S ++ L +F+++ +
Sbjct: 286 FVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREE 345
Query: 297 H----------------------------------GVRPDDFTFASILAACAGLASVQHG 322
G P+ T S+L+ CA ++ HG
Sbjct: 346 KIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHG 405
Query: 323 KQIHAHLIRMRLN-------QDVGVGNALVNMYAKCGLISCSYKLFNEML--HRNVVSWN 373
K+ H H I+ LN D+ V NAL++MY+KC + +F+ + R+VV+W
Sbjct: 406 KETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWT 465
Query: 374 TIIAAHANHRLGGSALKLFEQMKATG--IKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
+I +A H AL+LF QM + P++ T L AC G ++ G +
Sbjct: 466 VLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVL 525
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
+ S + CLID+ ++G + A
Sbjct: 526 RNRFESAMLFVANCLIDMYSKSGDVDAAR 554
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 193/403 (47%), Gaps = 28/403 (6%)
Query: 141 LISMYMKVGYSSDALLVYGEAFEPN---LVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
+ISMY+ + AL V P+ + +N LI V E ++++ M R G
Sbjct: 83 IISMYLTFNSPAKALSVL-RRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGW 141
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
PD ++F L+ C R G +H + E N FVGN ++++Y + A +
Sbjct: 142 RPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQ 201
Query: 258 AFRLIEEK---DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA 314
F + E+ DL+SWN+ +AA D + + +F+ M+ D G+RPD + ++L ACA
Sbjct: 202 VFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACA 261
Query: 315 GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNT 374
+ + GKQ+H + +R L +DV VGNA+V+MYAKCG++ + K+F M ++VVSWN
Sbjct: 262 SVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNA 321
Query: 375 IIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTY 434
++ ++ AL LFE+++ I+ + VT+ ++ GL E F M
Sbjct: 322 MVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQM-LLC 380
Query: 435 GISPDIEHFTCLIDLLGRAGKLLEAEE---YTKKFPL-------GQDPIVLGTLL---SA 481
G P++ L+ AG LL +E + K+ L G D +V+ L+ S
Sbjct: 381 GSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSK 440
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGD 524
C+ + A+ +F L P V + L + G+
Sbjct: 441 CK-------SPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGE 476
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/480 (25%), Positives = 202/480 (42%), Gaps = 86/480 (17%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A S+ ++L C+ A +G +H L+ G+ DV V N V+++YAKCG M A KVF+
Sbjct: 250 AVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFE 309
Query: 62 EMSERNLVSWSAMISGHHQAGEH-----------------------------------LL 86
M +++VSW+AM++G+ Q G
Sbjct: 310 RMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFE 369
Query: 87 ALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKF-------GYASISF 136
AL+ F QM L PN S +S CA +L+ G++ H +++K+
Sbjct: 370 ALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLM 429
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEP---NLVSFNALIAGFVENQQPEKGFEVFKLML 193
V N+LI MY K A ++ + P ++V++ LI G ++ + + E+F ML
Sbjct: 430 VINALIDMYSKCKSPKAARAMF-DLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQML 488
Query: 194 RQG--LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP-FVGNTIMALYSKFN 250
+ ++P+ F+ + L C+ LR G +H ++ + ES FV N ++ +YSK
Sbjct: 489 QPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSG 548
Query: 251 LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
+ A F + +++ +SW + + E+ L +F EM V PD TF +L
Sbjct: 549 DVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLV-PDGVTFVVVL 607
Query: 311 AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVV 370
AC+ V G +N+D GV + L+S + +L M
Sbjct: 608 YACSHSGMVDQGINYFNG-----MNKDFGVVPGAEHYACMVDLLSRAGRLDEAM------ 656
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSM 430
E ++ +KP ++ LL+AC V+ GE N +
Sbjct: 657 ----------------------ELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQL 694
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 196/432 (45%), Gaps = 66/432 (15%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQ-------PDVIVSNHVLNLYAKCGKMILA 56
++ SLL C+ L G H +K + D++V N ++++Y+KC A
Sbjct: 388 TLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAA 447
Query: 57 RKVFDEMS--ERNLVSWSAMISGHHQAGEHLLALEFFSQM-----HLLPNEYIFASAISA 109
R +FD + +R++V+W+ +I G+ Q GE ALE FSQM ++PN + + A+ A
Sbjct: 448 RAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMA 507
Query: 110 CAGIQSLVKGQQIHAYSLKFGYAS-ISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVS 168
CA + +L G+QIHAY L+ + S + FV N LI MY K G A +V+ + N VS
Sbjct: 508 CARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVS 567
Query: 169 FNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV 228
+ +L+ G+ + + E+ ++F M + L+PD +F L CS S + +G+
Sbjct: 568 WTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGI------- 620
Query: 229 KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLS 288
N + F ++ AE ++ DL+ S ++ +
Sbjct: 621 -----------NYFNGMNKDFGVVPGAEHYACMV---DLL---------SRAGRLDEAME 657
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMY 348
+ + M ++P + ++L+AC A+V+ G+ L+ + D G L N+Y
Sbjct: 658 LIRGMP----MKPTPAVWVALLSACRVYANVELGEYAANQLLELESGND-GSYTLLSNIY 712
Query: 349 --AKC--GLISCSYKLFNEML-HRNVVSW-------NTIIAAHANHRLGGSALKLF---- 392
A+C + Y + N + R SW T A +H + L
Sbjct: 713 ANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLM 772
Query: 393 EQMKATGIKPDS 404
+++KA G PD+
Sbjct: 773 QRIKALGYVPDN 784
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 196/564 (34%), Positives = 305/564 (54%), Gaps = 5/564 (0%)
Query: 17 ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMIS 76
L G +H K+G Q +V V+ ++++Y++ G +AR +FD+M R++ SW+AMIS
Sbjct: 230 TLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMIS 289
Query: 77 GHHQAGEHLLALEFFSQMHLLPNEYIFASAIS---ACAGIQSLVKGQQIHAYSLKFGYAS 133
G Q G AL+ +M L + F + +S C + + IH Y +K G
Sbjct: 290 GLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEF 349
Query: 134 ISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLML 193
FV N+LI+MY K G DA + + F ++VS+N++IA + +N P F M
Sbjct: 350 DLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQ 409
Query: 194 RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK-CKLESNPFVGNTIMALYSKFNLI 252
G PD + I + S D + +H ++ L + +GN ++ +Y+K L+
Sbjct: 410 LNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLL 469
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
A K F +I KD+ISWNT I + + + V+K M + P+ T+ SIL A
Sbjct: 470 DSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPA 529
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
A + ++Q G +IH +I+ L+ DV V L+++Y KCG + + LF ++ + V+W
Sbjct: 530 YAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTW 589
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
N II+ H H LKLF +M G+KPD VTF+ LL+AC+H+G V+EG+ F M++
Sbjct: 590 NAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE 649
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGE 492
YGI P ++H+ C++DLLGRAG L A ++ K PL D + G LL ACR+ ++ +G+
Sbjct: 650 -YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGK 708
Query: 493 RLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTF 552
+ +LF + YVLLSN+YA+ G W V R + ++ GLKK P +S IEV
Sbjct: 709 FASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKV 768
Query: 553 EKFTVAEFSHSKIGEINYMLKTLS 576
+ F SH K EI L+ L+
Sbjct: 769 DVFYTGNQSHPKCKEIYEELRVLT 792
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 135/450 (30%), Positives = 248/450 (55%), Gaps = 11/450 (2%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
LHA ++ G + +S ++NLYA G + L+R FD++ ++++ +W++MIS + G
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 197
Query: 84 HLLALEFFSQMHLL----PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
A+ F Q+ L+ P+ Y F + AC +LV G++IH ++ K G+ FV
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG---TLVDGRKIHCWAFKLGFQWNVFVAA 254
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
SLI MY + G++ A ++ + ++ S+NA+I+G ++N + +V M +G+
Sbjct: 255 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKM 314
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
+ + L +C D+ M++H +K LE + FV N ++ +Y+KF + +A KAF
Sbjct: 315 NFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAF 374
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+ + D++SWN+ IAA D F +M + G +PD T S+ + A
Sbjct: 375 QQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLN-GFQPDLLTLVSLASIVAQSRDC 433
Query: 320 QHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA 378
++ + +H ++R L +DV +GNA+V+MYAK GL+ ++K+F + ++V+SWNT+I
Sbjct: 434 KNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITG 493
Query: 379 HANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
+A + L A+++++ M + I P+ T++ +L A H G +++G + KT +
Sbjct: 494 YAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKT-NLH 552
Query: 438 PDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
D+ TCLID+ G+ G+L++A + P
Sbjct: 553 LDVFVATCLIDVYGKCGRLVDAMSLFYQVP 582
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 204/406 (50%), Gaps = 23/406 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+L C + + + +H V+K G++ D+ VSN ++N+YAK G + ARK F +M
Sbjct: 318 TVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQM 377
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
++VSW+++I+ + Q + + A FF +M L P+ S S A + +
Sbjct: 378 FITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSR 437
Query: 121 QIHAYSLKFGYASISFV-GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+H + ++ G+ V GN+++ MY K+G A V+ +++S+N LI G+ +N
Sbjct: 438 SVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQN 497
Query: 180 QQPEKGFEVFKLMLR-QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ EV+K+M + ++P++ ++ L + L++GM +H +K L + FV
Sbjct: 498 GLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFV 557
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++ +Y K + +A F + ++ ++WN I+ EK L +F EM D G
Sbjct: 558 ATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEML-DEG 616
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNAL------VNMYAKCG 352
V+PD TF S+L+AC+ V+ GK RL Q+ G+ +L V++ + G
Sbjct: 617 VKPDHVTFVSLLSACSHSGFVEEGKWC------FRLMQEYGIKPSLKHYGCMVDLLGRAG 670
Query: 353 LISCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSAL-KLFE 393
+ +Y +M L + W ++ A H N LG A +LFE
Sbjct: 671 YLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFE 716
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 323 KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH 382
K +HA L+ Q + + LVN+YA G +S S F+++ ++V +WN++I+A+ ++
Sbjct: 136 KCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHN 195
Query: 383 RLGGSALKLFEQ-MKATGIKPDSVTFIGLLTAC 414
A+ F Q + + I+PD TF +L AC
Sbjct: 196 GHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC 228
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 207/576 (35%), Positives = 320/576 (55%), Gaps = 7/576 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +L C L G +HA VL+ G+ +V V N ++ +YAKCG + ARKVFD M
Sbjct: 197 TFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGM 256
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
S + +SW+AMI+GH + E LE F M + PN S A + L +
Sbjct: 257 SLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAK 316
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+IHA ++K G+A+ NSLI MY +G +A V+ + +S+ A+I+G+ +N
Sbjct: 317 EIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNG 376
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
P+K EV+ LM + PD + A L C+ L G+ LH L V N
Sbjct: 377 FPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVAN 436
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA-CSHCADYEKGLSVFKEMSNDHGV 299
++ +Y+K +I +A + F+ + +KD+ISW++ IA C + ++E L F+ M D V
Sbjct: 437 ALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFE-ALYYFRHMLAD--V 493
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+P+ TF + LAACA S++ GK+IHAH++R + + V NAL+++Y KCG ++
Sbjct: 494 KPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWA 553
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
F ++VVSWN ++A H G AL F +M TG PD VTF+ LL C+ AG+
Sbjct: 554 QFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGM 613
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V +G F+SM + Y I P+++H+ C++DLL R G+L E + + P+ D V G LL
Sbjct: 614 VSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALL 673
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
+ CR+ R++ +GE AK + L+P +VLLS+LYA GMW +V+ RK ++ GL+
Sbjct: 674 NGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMRVKGLEH 733
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ S +EV+G F + SH +I EIN +L +
Sbjct: 734 DYGCSWVEVKGAIHAFLTDDESHPQIKEINDVLDGI 769
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 209/409 (51%), Gaps = 13/409 (3%)
Query: 7 SLLHHCSKTKALQQGISL----HAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+L H C +A + G+ AA G++ + N +L++ + G+ A KVF +
Sbjct: 99 ALFHLCEWRRAAEHGLRACGHADAAHGTFGLR----LGNAMLSMLVRFGETWHAWKVFAK 154
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKG 119
M ER++ SW+ M+ G+ +AG AL+ + +M P+ Y F + +C G+ L G
Sbjct: 155 MPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMG 214
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+++HA+ L+FG V N+L++MY K G A V+ + +S+NA+IAG EN
Sbjct: 215 REVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFEN 274
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ E G E+F ML + P+ + + +DL +H L VK ++
Sbjct: 275 HECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFC 334
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N+++ +YS +GEA F +E +D +SW I+ +K L V+ M ++ V
Sbjct: 335 NSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNN-V 393
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
PDD T AS LAACA L + G ++H + + V NALV MYAK +I + +
Sbjct: 394 SPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIE 453
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
+F M ++V+SW+++IA + AL F M A +KP+SVTFI
Sbjct: 454 VFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLAD-VKPNSVTFI 501
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 74/161 (45%), Gaps = 1/161 (0%)
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD+ + ++ C + +HG + H + +GNA+++M + G ++K+
Sbjct: 92 PDEDAYVALFHLCEWRRAAEHGLRACGHADAAHGTFGLRLGNAMLSMLVRFGETWHAWKV 151
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F +M R+V SWN ++ + AL L+ +M G +PD TF +L +C +
Sbjct: 152 FAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDL 211
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
G + + +G+ +++ L+ + + G + A +
Sbjct: 212 TMGREVHAHVLR-FGLGVEVDVLNALVTMYAKCGDVEAARK 251
>gi|449519412|ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial-like [Cucumis sativus]
Length = 781
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 204/585 (34%), Positives = 331/585 (56%), Gaps = 21/585 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++ L C + G LH LK G + DV V N ++ +Y++ ++ ARKVFDEM
Sbjct: 173 TYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEM 232
Query: 64 SERNLVSWSAMISGHHQAGEH-LLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
R+ VSWSAMI+G+ Q G++ L A+ F QM + + A+S C ++L G
Sbjct: 233 PSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKFDNVPITGALSVCGHERNLELG 292
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+QIH ++K G+ + + VGN LIS Y K DA V+ + N++S+ +I+ +
Sbjct: 293 KQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLY--- 349
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
E +F M G+ P+ +F G L ++ N + +G+++H L +K S VG
Sbjct: 350 --EEGAVSLFNKMRLDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVG 407
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N+++ +Y+KF + +A + F + +++ISWN I+ + A ++ L F ++
Sbjct: 408 NSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYAIMEY-- 465
Query: 300 RPDDFTFASILAACAGLA--SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
+P+++TF S+L A + S++HG++ H+HLI++ LN D + AL++MYAK G I S
Sbjct: 466 KPNEYTFGSVLNAISAGEDISLKHGQRCHSHLIKVGLNVDPIISGALLDMYAKRGSIQES 525
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++FNE ++ +W +I+ +A H S +KLFE+M+ IKPD+V F+ +LTAC+
Sbjct: 526 QRVFNETSKQSQFAWTALISGYAQHGDYESVIKLFEEMEKERIKPDAVIFLSVLTACSRN 585
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
+V G +FN M K + I P+ EH++C++D+LGRAG+L EAEE + P G L +
Sbjct: 586 RMVDMGRQFFNMMIKDHMIEPEGEHYSCMVDMLGRAGRLEEAEEILARIPGGPGVSALQS 645
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL ACR +V + ER+A L +P + PYVL+SNLYA G W VA RK +++ G+
Sbjct: 646 LLGACRTHGNVEMAERIANDLMKKEPLESGPYVLMSNLYAQKGDWEKVAKVRKEMRERGV 705
Query: 538 KKEPSYSMIEVQGTF-------EKFTVAEFSHSKIGEINYMLKTL 575
KE +S ++V G F F+ + SH + EI M K +
Sbjct: 706 MKEIGFSWVDV-GNFGASNLYLHGFSSGDVSHPQSEEIFRMAKYM 749
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 138/449 (30%), Positives = 241/449 (53%), Gaps = 23/449 (5%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G +H V+ G + VSN ++N+Y K G++ A VF + + ++VSW+ ++SG +
Sbjct: 92 GRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSWNTILSGFEK 151
Query: 81 AGEHLLALEFFSQMHLLPNEY---IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
+ AL F +M+L ++ + +A+S C + + G Q+H +LK G+ FV
Sbjct: 152 SEN---ALSFALRMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFV 208
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE---VFKLMLR 194
GN+L++MY + + DA V+ E + VS++A+I G+ Q+ + G + VF M+R
Sbjct: 209 GNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYA--QEGDNGLQAILVFVQMVR 266
Query: 195 QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGE 254
+G+ D G L +C +L G +HCL VK E++ VGN +++ YSK +I +
Sbjct: 267 EGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIED 326
Query: 255 AEKAFRLIEEKDLISWNTFIAACSHCADYEKG-LSVFKEMSNDHGVRPDDFTFASILAAC 313
A+ F LI ++++ISW T I+ YE+G +S+F +M D GV P+D TF +L A
Sbjct: 327 AKAVFELINDRNVISWTTMISL------YEEGAVSLFNKMRLD-GVYPNDVTFIGLLHAI 379
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
V+ G +H I+ ++ VGN+L+ MYAK + + ++F E+ +R ++SWN
Sbjct: 380 TIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWN 439
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV--KEGEAYFNSME 431
+I+ +A + L AL+ F KP+ TF +L A + + K G+ + +
Sbjct: 440 ALISGYAQNALCQEALEAF-LYAIMEYKPNEYTFGSVLNAISAGEDISLKHGQRCHSHLI 498
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
K G++ D L+D+ + G + E++
Sbjct: 499 KV-GLNVDPIISGALLDMYAKRGSIQESQ 526
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 125/263 (47%), Gaps = 9/263 (3%)
Query: 157 VYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL--PDRFSFAGGLEICSVS 214
++ ++ PN SFN ++ ++ + FK R GL D F+ L+ C
Sbjct: 29 LFDQSPPPNAASFNRVLLNYLPRDGAFQSLRFFKNNFRWGLDGNADEFTLVLALKACCGF 88
Query: 215 NDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFI 274
L G +H + S+ V N++M +Y K + A F+ + + D++SWNT +
Sbjct: 89 PKL--GRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSWNTIL 146
Query: 275 AACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRL 334
+ E LS M N +GV+ D T+ + L+ C G Q+H ++
Sbjct: 147 SGFEKS---ENALSFALRM-NLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGF 202
Query: 335 NQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGG-SALKLFE 393
DV VGNALV MY++ + + K+F+EM R+ VSW+ +I +A G A+ +F
Sbjct: 203 KGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFV 262
Query: 394 QMKATGIKPDSVTFIGLLTACNH 416
QM G+K D+V G L+ C H
Sbjct: 263 QMVREGVKFDNVPITGALSVCGH 285
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 189/576 (32%), Positives = 320/576 (55%), Gaps = 6/576 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
I S+L C + G +H V+K G DV V N ++ +Y++ G + LAR +FD++
Sbjct: 127 IPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIE 186
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQ 121
+++VSWS MI + ++G AL+ MH++ P+E S A + L G+
Sbjct: 187 NKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKA 246
Query: 122 IHAYSLKFGYASISFVG--NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+HAY ++ G S V +LI MY+K + A V+ + +++S+ A+IA ++
Sbjct: 247 MHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHC 306
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+G +F ML +G+ P+ + ++ C + L G +LH T++ + +
Sbjct: 307 NNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLA 366
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+ +Y K + A F + KDL+ W+ I++ + ++ +F M+ G+
Sbjct: 367 TAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTG-CGI 425
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
RP++ T S+L CA S++ GK IH+++ + + D+ + + V+MYA CG I +++
Sbjct: 426 RPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHR 485
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
LF E R++ WN +I+ A H G +AL+LFE+M+A G+ P+ +TFIG L AC+H+GL
Sbjct: 486 LFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGL 545
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
++EG+ F+ M +G +P +EH+ C++DLLGRAG L EA E K P+ + V G+ L
Sbjct: 546 LQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFL 605
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
+AC+L +++ +GE AKQ L+P + VL+SN+YAS WGDVA R+ +KD G+ K
Sbjct: 606 AACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVK 665
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
EP S IEV G +F + + H ++ M+ +
Sbjct: 666 EPGVSSIEVNGLLHEFIMGDREHPDAKKVYEMIDEM 701
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 178/361 (49%), Gaps = 6/361 (1%)
Query: 99 NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY 158
+ ++ S + AC I S + GQ++H + +K G+ FV N+LI MY +VG + A L++
Sbjct: 123 DNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLF 182
Query: 159 GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLR 218
+ ++VS++ +I + + ++ ++ + M + P + + DL+
Sbjct: 183 DKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLK 242
Query: 219 KGMILHCLTV---KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIA 275
G +H + KC P ++ +Y K + A + F + + +ISW IA
Sbjct: 243 LGKAMHAYVMRNGKCGKSGVPLC-TALIDMYVKCENLAYARRVFDGLSKASIISWTAMIA 301
Query: 276 ACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN 335
A HC + +G+ +F +M + G+ P++ T S++ C +++ GK +HA +R
Sbjct: 302 AYIHCNNLNEGVRLFVKMLGE-GMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFT 360
Query: 336 QDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM 395
+ + A ++MY KCG + + +F+ ++++ W+ +I+++A + A +F M
Sbjct: 361 LSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHM 420
Query: 396 KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGK 455
GI+P+ T + LL C AG ++ G+ + ++K GI D+ T +D+ G
Sbjct: 421 TGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQ-GIKGDMILKTSFVDMYANCGD 479
Query: 456 L 456
+
Sbjct: 480 I 480
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 154/324 (47%), Gaps = 5/324 (1%)
Query: 160 EAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRK 219
E++ N + LI +++N P +++ M D F L+ C +
Sbjct: 83 ESYSSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLL 142
Query: 220 GMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSH 279
G +H VK + FV N ++ +YS+ + A F IE KD++SW+T I +
Sbjct: 143 GQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDR 202
Query: 280 CADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG 339
++ L + ++M + V+P + SI A LA ++ GK +HA+++R G
Sbjct: 203 SGLLDEALDLLRDM-HVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSG 261
Query: 340 VG--NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA 397
V AL++MY KC ++ + ++F+ + +++SW +IAA+ + ++LF +M
Sbjct: 262 VPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLG 321
Query: 398 TGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLL 457
G+ P+ +T + L+ C AG ++ G+ ++ G + + T ID+ G+ G +
Sbjct: 322 EGMFPNEITMLSLVKECGTAGALELGK-LLHAFTLRNGFTLSLVLATAFIDMYGKCGDVR 380
Query: 458 EAEEYTKKFPLGQDPIVLGTLLSA 481
A F +D ++ ++S+
Sbjct: 381 SARSVFDSFK-SKDLMMWSAMISS 403
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 94/178 (52%), Gaps = 5/178 (2%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+++ SLL C+K +L+ G +H+ + K GI+ D+I+ +++YA CG + A ++F E
Sbjct: 430 RTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAE 489
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKG 119
++R++ W+AMISG G ALE F +M L PN+ F A+ AC+ L +G
Sbjct: 490 ATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEG 549
Query: 120 QQI-HAYSLKFGYASISFVGNSLISMYMKVGYSSDA-LLVYGEAFEPNLVSFNALIAG 175
+++ H +FG+ ++ + + G +A L+ PN+ F + +A
Sbjct: 550 KRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAA 607
>gi|449439723|ref|XP_004137635.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 769
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 196/547 (35%), Positives = 307/547 (56%), Gaps = 12/547 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S L C T + G ++HA LK + + NHVLN Y KCG++ ++FDEM ER
Sbjct: 220 SFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMPER 279
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQQI 122
N+VSWSA+I+G Q G AL F +MH ++PNE+ SA+ AC+ Q L+ QI
Sbjct: 280 NVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSYQI 339
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
+A+ ++ GY S F+ N+ ++ ++ +AL V+ + VS+NA++AG+++
Sbjct: 340 YAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLAY- 398
Query: 183 EKGFEVFKLMLRQGL---LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
FE+ K R L PD F+FA L + ++ R G+ +H VK ++ VG
Sbjct: 399 ---FELPKFWRRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVG 455
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N++ +Y K + + KAF + D+ SW A C C + K L V EM N GV
Sbjct: 456 NSLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALEVIYEMKN-VGV 514
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
R + FT A+ L +CA LAS++ GK+ H I++ + DV V NAL++MYAKCG ++ +
Sbjct: 515 RLNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANV 574
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F M R+VVSW T+I A++ AL++F++M+ +P+ +TFI +L AC+ G
Sbjct: 575 VFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGGF 634
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
+ E YF+SM +GI+P +H+ C+++LLGRAG + EAE+ + P +V TLL
Sbjct: 635 IDEAWKYFSSMSADHGIAPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFQPGSLVWQTLL 694
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
AC + D+ G+R A+ +L S Y+LLSN++A W V R++++ +KK
Sbjct: 695 GACLVHGDIETGKRAAEHALNLDRNDPSTYILLSNMFAGGDNWDSVGILRELMETRDVKK 754
Query: 540 EPSYSMI 546
P S +
Sbjct: 755 VPGSSWM 761
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 175/362 (48%), Gaps = 6/362 (1%)
Query: 100 EYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS-FVGNSLISMYMKVGYSSDALLVY 158
E + S + C G IHA LK G+ S F N +++ Y+K G S L ++
Sbjct: 215 EDFYVSFLQRCVLTSDSRHGSAIHAKFLK-GFLPFSLFFHNHVLNFYVKCGRLSYGLQLF 273
Query: 159 GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG-LLPDRFSFAGGLEICSVSNDL 217
E E N+VS++A+IAGFV++ +P + +F M G ++P+ F+ L CS++ L
Sbjct: 274 DEMPERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRL 333
Query: 218 RKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC 277
++ V+ SN F+ N + + + EA + F KD +SWN +A
Sbjct: 334 ICSYQIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGY 393
Query: 278 SHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD 337
A +E L F N V+PD+FTFASIL A L+ + G Q+H L++ D
Sbjct: 394 LQLAYFE--LPKFWRRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGND 451
Query: 338 VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA 397
+ VGN+L +MY K + +K F+EM +V SW + A AL++ +MK
Sbjct: 452 ICVGNSLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALEVIYEMKN 511
Query: 398 TGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLL 457
G++ + T L +C + ++EG+ F+ + G D+ L+D+ + G +
Sbjct: 512 VGVRLNKFTLATALNSCANLASIEEGKK-FHGLRIKLGTDVDVCVDNALLDMYAKCGCMT 570
Query: 458 EA 459
A
Sbjct: 571 SA 572
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 210/459 (45%), Gaps = 39/459 (8%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S LH CS T+ L ++A ++++G +V + N L + K++ A +VF+
Sbjct: 319 TLVSALHACSLTQRLICSYQIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESC 378
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
++ VSW+AM++G+ Q L +F+ +M+L P+ + FAS ++ A + G
Sbjct: 379 LSKDTVSWNAMMAGYLQLAYFELP-KFWRRMNLESVKPDNFTFASILTGLAALSEFRLGL 437
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H +K GY + VGNSL MY+K D + E ++ S+ + AG ++
Sbjct: 438 QVHGQLVKSGYGNDICVGNSLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCG 497
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+P K EV M G+ ++F+ A L C+ + +G H L +K + + V N
Sbjct: 498 EPMKALEVIYEMKNVGVRLNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDN 557
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y+K + A FR ++E+ ++SW T I +H ++ L +F EM
Sbjct: 558 ALLDMYAKCGCMTSANVVFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEA-E 616
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA------LVNMYAKCGLI 354
P+ TF +L AC+ Q G A ++ D G+ + +VN+ + G I
Sbjct: 617 PNHITFICVLNACS-----QGGFIDEAWKYFSSMSADHGIAPSEDHYVCMVNLLGRAGCI 671
Query: 355 SCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSALK--------------LFEQMK 396
+ L +M + W T++ A H + G A + L M
Sbjct: 672 KEAEDLILQMPFQPGSLVWQTLLGACLVHGDIETGKRAAEHALNLDRNDPSTYILLSNMF 731
Query: 397 ATGIKPDSVTFIGLLTACNHAGLVKE--GEAYFNSMEKT 433
A G DSV G+L VK+ G ++ ++M +T
Sbjct: 732 AGGDNWDSV---GILRELMETRDVKKVPGSSWMSNMRRT 767
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
F S + V+ +DF + S L C + +HG IHA ++ L + N ++N Y
Sbjct: 203 FVSKSENSSVKLEDF-YVSFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYV 261
Query: 350 KCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG-IKPDSVTFI 408
KCG +S +LF+EM RNVVSW+ IIA H AL LF +M G I P+ T +
Sbjct: 262 KCGRLSYGLQLFDEMPERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLV 321
Query: 409 GLLTACN 415
L AC+
Sbjct: 322 SALHACS 328
>gi|449503129|ref|XP_004161848.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 769
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 196/547 (35%), Positives = 307/547 (56%), Gaps = 12/547 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S L C T + G ++HA LK + + NHVLN Y KCG++ ++FDEM ER
Sbjct: 220 SFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMPER 279
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQQI 122
N+VSWSA+I+G Q G AL F +MH ++PNE+ SA+ AC+ Q L+ QI
Sbjct: 280 NVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSYQI 339
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
+A+ ++ GY S F+ N+ ++ ++ +AL V+ + VS+NA++AG+++
Sbjct: 340 YAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLAY- 398
Query: 183 EKGFEVFKLMLRQGL---LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
FE+ K R L PD F+FA L + ++ R G+ +H VK ++ VG
Sbjct: 399 ---FELPKFWRRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVG 455
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N++ +Y K + + KAF + D+ SW A C C + K L V EM N GV
Sbjct: 456 NSLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALKVIYEMKN-VGV 514
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
R + FT A+ L +CA LAS++ GK+ H I++ + DV V NAL++MYAKCG ++ +
Sbjct: 515 RLNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANV 574
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F M R+VVSW T+I A++ AL++F++M+ +P+ +TFI +L AC+ G
Sbjct: 575 VFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGGF 634
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
+ E YF+SM +GI+P +H+ C+++LLGRAG + EAE+ + P +V TLL
Sbjct: 635 IDEAWKYFSSMSADHGIAPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFQPGSLVWQTLL 694
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
AC + D+ G+R A+ +L S Y+LLSN++A W V R++++ +KK
Sbjct: 695 GACLVHGDIETGKRAAEHALNLDRNDPSTYILLSNMFAGGDNWDSVGILRELMETRDVKK 754
Query: 540 EPSYSMI 546
P S +
Sbjct: 755 VPGSSWM 761
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 175/362 (48%), Gaps = 6/362 (1%)
Query: 100 EYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS-FVGNSLISMYMKVGYSSDALLVY 158
E + S + C G IHA LK G+ S F N +++ Y+K G S L ++
Sbjct: 215 EDFYVSFLQRCVLTSDSRHGSAIHAKFLK-GFLPFSLFFHNHVLNFYVKCGRLSYGLQLF 273
Query: 159 GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG-LLPDRFSFAGGLEICSVSNDL 217
E E N+VS++A+IAGFV++ +P + +F M G ++P+ F+ L CS++ L
Sbjct: 274 DEMPERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRL 333
Query: 218 RKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC 277
++ V+ SN F+ N + + + EA + F KD +SWN +A
Sbjct: 334 ICSYQIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGY 393
Query: 278 SHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD 337
A +E L F N V+PD+FTFASIL A L+ + G Q+H L++ D
Sbjct: 394 LQLAYFE--LPKFWRRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGND 451
Query: 338 VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA 397
+ VGN+L +MY K + +K F+EM +V SW + A ALK+ +MK
Sbjct: 452 ICVGNSLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALKVIYEMKN 511
Query: 398 TGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLL 457
G++ + T L +C + ++EG+ F+ + G D+ L+D+ + G +
Sbjct: 512 VGVRLNKFTLATALNSCANLASIEEGKK-FHGLRIKLGTDVDVCVDNALLDMYAKCGCMT 570
Query: 458 EA 459
A
Sbjct: 571 SA 572
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 210/459 (45%), Gaps = 39/459 (8%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S LH CS T+ L ++A ++++G +V + N L + K++ A +VF+
Sbjct: 319 TLVSALHACSLTQRLICSYQIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESC 378
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
++ VSW+AM++G+ Q L +F+ +M+L P+ + FAS ++ A + G
Sbjct: 379 LSKDTVSWNAMMAGYLQLAYFELP-KFWRRMNLESVKPDNFTFASILTGLAALSEFRLGL 437
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H +K GY + VGNSL MY+K D + E ++ S+ + AG ++
Sbjct: 438 QVHGQLVKSGYGNDICVGNSLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCG 497
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+P K +V M G+ ++F+ A L C+ + +G H L +K + + V N
Sbjct: 498 EPMKALKVIYEMKNVGVRLNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDN 557
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y+K + A FR ++E+ ++SW T I +H ++ L +F EM
Sbjct: 558 ALLDMYAKCGCMTSANVVFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEA-E 616
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA------LVNMYAKCGLI 354
P+ TF +L AC+ Q G A ++ D G+ + +VN+ + G I
Sbjct: 617 PNHITFICVLNACS-----QGGFIDEAWKYFSSMSADHGIAPSEDHYVCMVNLLGRAGCI 671
Query: 355 SCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSALK--------------LFEQMK 396
+ L +M + W T++ A H + G A + L M
Sbjct: 672 KEAEDLILQMPFQPGSLVWQTLLGACLVHGDIETGKRAAEHALNLDRNDPSTYILLSNMF 731
Query: 397 ATGIKPDSVTFIGLLTACNHAGLVKE--GEAYFNSMEKT 433
A G DSV G+L VK+ G ++ ++M +T
Sbjct: 732 AGGDNWDSV---GILRELMETRDVKKVPGSSWMSNMRRT 767
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
F S + V+ +DF + S L C + +HG IHA ++ L + N ++N Y
Sbjct: 203 FVSKSENSSVKLEDF-YVSFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYV 261
Query: 350 KCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG-IKPDSVTFI 408
KCG +S +LF+EM RNVVSW+ IIA H AL LF +M G I P+ T +
Sbjct: 262 KCGRLSYGLQLFDEMPERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLV 321
Query: 409 GLLTACN 415
L AC+
Sbjct: 322 SALHACS 328
>gi|218184996|gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
Length = 799
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 204/626 (32%), Positives = 320/626 (51%), Gaps = 69/626 (11%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + LL CS + L G+ +HA +K G++ DV + ++++Y KC + A F M
Sbjct: 151 TFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGM 210
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQ 120
ERN VSW + I+G Q +++ LE F +M L ++ +ASA +CA + L G+
Sbjct: 211 PERNWVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGR 270
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HA+++K ++S VG +++ +Y K +DA + + + NA++ G
Sbjct: 271 QLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGL---- 326
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK--------CK- 231
M+R + D S +G C+ + G +HCL +K CK
Sbjct: 327 ----------FMIRSSIRFDVVSLSGVFSACAETKGYFPGQQVHCLAIKSVLDLYGKCKA 376
Query: 232 -------------------------LESN-----------------PFVGNTIMALYSKF 249
LE N FV +T++ +Y K
Sbjct: 377 LMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFDAFVASTVVDMYCKC 436
Query: 250 NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
+I EA+K I + ++SWN ++ S + E F EM D G++PD FTFA++
Sbjct: 437 GIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQKFFSEML-DMGLKPDHFTFATV 495
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
L CA LA+++ GKQIH +I+ + D + + LV+MYAKCG + S +F ++ R+
Sbjct: 496 LDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDF 555
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNS 429
VSWN +I +A H LG AL++FE+M+ + P+ TF+ +L AC+H GL +G YF+
Sbjct: 556 VSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHL 615
Query: 430 MEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVV 489
M Y + P +EHF C++D+LGR+ EA ++ P D ++ TLLS C++R+DV
Sbjct: 616 MTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVE 675
Query: 490 IGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQ 549
I E A + L P +S Y+LLSN+YA G W DV+ R++LK LKKEP S IE Q
Sbjct: 676 IAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEAQ 735
Query: 550 GTFEKFTVAEFSHSKIGEINYMLKTL 575
F V + +H + GE+ ML L
Sbjct: 736 SEMHGFLVGDKAHPRSGELYEMLNDL 761
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/468 (27%), Positives = 222/468 (47%), Gaps = 50/468 (10%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH 95
D + N +L Y+ G + A +FD M + ++VSW+A++SG+ Q G +++ F +M
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141
Query: 96 ---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSS 152
+ P+ FA + +C+ ++ L G Q+HA ++K G G++L+ MY K
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201
Query: 153 DALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
DAL + E N VS+ + IAG V+N+Q +G E+F M R GL + S+A C+
Sbjct: 202 DALCFFYGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261
Query: 213 VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF-----RLIEEK-- 265
+ L G LH +K K S+ VG I+ +Y+K N + +A +AF +E
Sbjct: 262 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 321
Query: 266 --------------DLISWNTFIAACSHCADYEKGLSV----FKEMSNDHG--------- 298
D++S + +AC+ Y G V K + + +G
Sbjct: 322 MMVGLFMIRSSIRFDVVSLSGVFSACAETKGYFPGQQVHCLAIKSVLDLYGKCKALMEAY 381
Query: 299 ------VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
+ D ++ +I+AA L H H M L D V + +V+MY KCG
Sbjct: 382 LIFQGMKQKDSVSWNAIIAA---LEQNGHYDDTILHFNEM-LRFDAFVASTVVDMYCKCG 437
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
+I + KL + + + VVSWN I++ + ++ +A K F +M G+KPD TF +L
Sbjct: 438 IIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQKFFSEMLDMGLKPDHFTFATVLD 497
Query: 413 ACNHAGLVKEGEAYFNSMEKTYGISPDIEHF-TCLIDLLGRAGKLLEA 459
C + ++ G+ + K + D E+ + L+D+ + G + ++
Sbjct: 498 TCANLATIELGKQIHGQIIKQEML--DDEYISSTLVDMYAKCGDMPDS 543
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 115/254 (45%), Gaps = 6/254 (2%)
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
NT++ YS I A F + + D++SWN ++ +++ + +F EM+ GV
Sbjct: 87 NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMAR-RGV 145
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
PD TFA +L +C+ L + G Q+HA ++ L DV G+ALV+MY KC + +
Sbjct: 146 SPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALC 205
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
F M RN VSW + IA + L+LF +M+ G+ ++ +C
Sbjct: 206 FFYGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSC 265
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP----LGQDPIVL 475
+ G K S D T ++D+ +A L +A P + +++
Sbjct: 266 LNTGRQLHAHAIKN-KFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMV 324
Query: 476 GTLLSACRLRRDVV 489
G + +R DVV
Sbjct: 325 GLFMIRSSIRFDVV 338
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 9/159 (5%)
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG---VGNALVNMY 348
E V P TF+ + +CA A + A RM ++ V V N L+ MY
Sbjct: 4 EQQQPPPVAPARVTFSRVFQSCAQ-AGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMY 62
Query: 349 AKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
A+C +C+ ++F+ M R+ VSWNT++ A+++ +A+ LF+ M PD V++
Sbjct: 63 ARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMP----DPDVVSWN 118
Query: 409 GLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLI 447
L++ G+ +E F M + G+SPD F L+
Sbjct: 119 ALVSGYCQRGMFQESVDLFVEMARR-GVSPDRTTFAVLL 156
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 208/627 (33%), Positives = 325/627 (51%), Gaps = 75/627 (11%)
Query: 25 HAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGH------ 78
HA +LK + + + N +++ YA+ G++ AR+VFDE+ RN S++A++S +
Sbjct: 40 HARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRP 99
Query: 79 ---------------------------HQAGEHLLALEFFSQMH---LLPNEYIFASAIS 108
H G AL F + MH + N Y FASA+S
Sbjct: 100 DEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFASALS 159
Query: 109 ACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVS 168
ACA + G+Q+H + +A + ++L+ MY K DA V+ E N+VS
Sbjct: 160 ACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVVS 219
Query: 169 FNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV 228
+N+LI + +N + +F M+ G PD + + + C+ R+G +H V
Sbjct: 220 WNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMV 279
Query: 229 KC-KLESNPFVGNTIMALYSK----------FN-------------LIGEAEKA------ 258
KC +L + + N ++ +Y+K F+ L G A+ A
Sbjct: 280 KCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQ 339
Query: 259 --FRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
F + EK++I+WN IAA + + E+ + +F ++ D + P +T+ ++L AC +
Sbjct: 340 VVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRD-SIWPTHYTYGNVLNACGNI 398
Query: 317 ASVQHGKQIHAHLIR--MRLN----QDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVV 370
A +Q G+Q H H+++ R + DV VGN+LV+MY K G I K+F M R+ V
Sbjct: 399 ADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNV 458
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSM 430
SWN +I +A + AL LFE+M + PDSVT IG+L+AC H+GLV EG YF+SM
Sbjct: 459 SWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFHSM 518
Query: 431 EKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVI 490
+ +GI+P +H+TC++DLLGRAG L EAEE P+ D ++ +LL ACRL ++V +
Sbjct: 519 TEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLGACRLHKNVEL 578
Query: 491 GERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQG 550
GE A +LF L P + PYVLLSN+YA G W +V R+ +KD G+ K+P S IE+
Sbjct: 579 GEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSMKDRGVSKQPGCSWIEIGR 638
Query: 551 TFEKFTVAEFSHSKIGEINYMLKTLSL 577
F + H EI+ L+ + +
Sbjct: 639 KMNVFLARDKRHPCRNEIHNTLRIIQM 665
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 213/447 (47%), Gaps = 64/447 (14%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A S +S L C+ K + G +H V + DV + + ++++YAKC + AR+VFD
Sbjct: 151 AYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFD 210
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
M ERN+VSW+++I+ + Q G AL F +M P+E +S +SACAG+ + +
Sbjct: 211 AMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADRE 270
Query: 119 GQQIHAYSLKFGYASISFV-GNSLISMYMKVGYS-------------------------- 151
G+Q+HA+ +K V N+L+ MY K G +
Sbjct: 271 GRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYA 330
Query: 152 -----SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAG 206
DA +V+ + E N++++N LIA + +N + E+ +F + R + P +++
Sbjct: 331 KSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGN 390
Query: 207 GLEICSVSNDLRKGMILHCLTVKCKL------ESNPFVGNTIMALYSKFNLIGEAEKAFR 260
L C DL+ G H +K ES+ FVGN+++ +Y K I + K F
Sbjct: 391 VLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFE 450
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEM--SNDHGVRPDDFTFASILAACAGLAS 318
+ +D +SWN I + + L +F+ M SN++ PD T +L+AC
Sbjct: 451 RMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNEN---PDSVTMIGVLSACGHSGL 507
Query: 319 VQHGKQ-IHAHLIRMRLNQDVGVG------NALVNMYAKCGLISCSYKLFNEM-LHRNVV 370
V G++ H+ + +D G+ +V++ + G + + +L N+M + + V
Sbjct: 508 VDEGRRYFHS------MTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSV 561
Query: 371 SWNTIIAA---HANHRLG-GSALKLFE 393
W +++ A H N LG +A +LFE
Sbjct: 562 LWASLLGACRLHKNVELGEWTAGRLFE 588
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 193/412 (46%), Gaps = 71/412 (17%)
Query: 115 SLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIA 174
+L + HA LK A +F+ N+L+S Y ++G DA V+ E N S+NAL++
Sbjct: 32 NLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLS 91
Query: 175 GFVENQQPEKGFEVFK---------------LMLRQG------------------LLPDR 201
+ +P++ +F+ + R G + +
Sbjct: 92 AYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNA 151
Query: 202 FSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRL 261
+SFA L C+ D R G +H L + + + + ++ +Y+K +A + F
Sbjct: 152 YSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDA 211
Query: 262 IEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQH 321
+ E++++SWN+ I + L +F EM G PD+ T +S+++ACAGLA+ +
Sbjct: 212 MPERNVVSWNSLITCYEQNGPVGEALMLFVEMMA-AGFSPDEVTLSSVMSACAGLAADRE 270
Query: 322 GKQIHAHLIRM-RLNQDVGVGNALVNMYAKCGLI---SCSYK------------------ 359
G+Q+HAH+++ RL D+ + NALV+MYAKCG C +
Sbjct: 271 GRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYA 330
Query: 360 ----------LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
+F++M+ +NV++WN +IAA+A + A++LF Q+K I P T+
Sbjct: 331 KSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGN 390
Query: 410 LLTAC-NHAGLVKEGEAYFNSMEK----TYGISPDIEHFTCLIDLLGRAGKL 456
+L AC N A L +A+ + +++ +G D+ L+D+ + G +
Sbjct: 391 VLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSI 442
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 194/578 (33%), Positives = 328/578 (56%), Gaps = 8/578 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
K SSL+ C K++ + + LK G + N +++ Y KCG ++ ARKVFD
Sbjct: 77 TKLYSSLIQQCIGIKSITDITKIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFD 134
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
E+ R++V+W++MI+ + + G A++ + +M +LP+E+ F+S A + + + +
Sbjct: 135 EVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHE 194
Query: 119 GQQIHAYSLKFGYA-SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
GQ+ H S+ G S FVG++L+ MY K G DA LV + ++V F ALI G+
Sbjct: 195 GQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYS 254
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ + + +VF+ M ++G+ + ++ + L C DL G ++H L VK LES
Sbjct: 255 HHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVA 314
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+++ +Y + L+ ++ K F+ + ++W + I E L F++M
Sbjct: 315 SQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRS- 373
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
+ P+ FT +S+L AC+ LA ++ GKQIHA +++ L+ D VG AL++ Y KCG +
Sbjct: 374 SITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIA 433
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+FN +L +VVS N++I ++A + G AL+LF MK TG++P++VT++G+L+ACN+A
Sbjct: 434 RSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNA 493
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GL++EG F+S + I +H+ C++DLLGRAG+L EAE + + D ++ T
Sbjct: 494 GLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNI-SDVVIWRT 552
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LLSACR+ DV + +R+ ++ L P +VLLSNLYAS G W V + +++ L
Sbjct: 553 LLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRL 612
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KK P+ S ++V+ F ++SH +I L+ L
Sbjct: 613 KKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEEL 650
>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
Length = 795
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 191/573 (33%), Positives = 327/573 (57%), Gaps = 5/573 (0%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L C++ AL +G + HAAV+K+G+ DV +N ++ LYAK G + A +VFD M R+
Sbjct: 126 VLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARD 185
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQQIH 123
+VSW+ M+ G+ G LAL F +M+ + + +A++AC +L G++IH
Sbjct: 186 IVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALALGREIH 245
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
Y+++ G VG SL+ MY K G A V+ + +V++N +I G+ N++P
Sbjct: 246 GYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPV 305
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
F+ F M G + + L C+ + G +H V+ + + ++
Sbjct: 306 DAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALL 365
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y K + +EK F I +K L+SWN IAA + Y++ +++F E+ N + PD
Sbjct: 366 EMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLN-QPLYPDY 424
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
FT +++ A L S++ KQ+H++++++ + NA+++MYA+CG I S ++F++
Sbjct: 425 FTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDK 484
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M ++V+SWNTII +A H G AL++F++MK +G++P+ TF+ +LTAC+ +GL EG
Sbjct: 485 MPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEG 544
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
FNSM++ YG+ P IEH+ C+ DLLGRAG+L E + + P+ + G+LL+A R
Sbjct: 545 WKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPIAPTSRIWGSLLTASR 604
Query: 484 LRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSY 543
+ D+ I E A+++F L+ T YV+LS++YA G W DV R ++K+ GL++ +
Sbjct: 605 NKNDIDIAEYAAERIFQLEHNNTGCYVVLSSMYADAGRWEDVERIRSLMKEKGLRRTEAR 664
Query: 544 SMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
S++E+ F + SH + +I+ LS
Sbjct: 665 SLVELNNKECSFVNGDMSHPQSEKIHEFSDILS 697
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 165/322 (51%), Gaps = 1/322 (0%)
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
SLI ++ G +A + P N +I GF + P ++ ML G P
Sbjct: 59 SLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARP 118
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
DRF+F L+ C+ + L +G H +K L ++ + N+++ALY+K L+G+AE+ F
Sbjct: 119 DRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVF 178
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+ +D++SWNT + L+ F+EM++ V D + LAAC +++
Sbjct: 179 DGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESAL 238
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
G++IH + IR L QDV VG +LV+MY KCG + + +F +M R VV+WN +I +
Sbjct: 239 ALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGY 298
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
A + A F QM+ G + + VT I LLTAC G + + + + + P
Sbjct: 299 ALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFL-PH 357
Query: 440 IEHFTCLIDLLGRAGKLLEAEE 461
+ T L+++ G+ GK+ +E+
Sbjct: 358 VVLETALLEMYGKVGKVESSEK 379
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 206/455 (45%), Gaps = 18/455 (3%)
Query: 32 GIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFF 91
G +P ++ +HV G+M A F ++ + MI G A L AL +
Sbjct: 54 GSRPKSLILSHV-----AAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAY 108
Query: 92 SQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKV 148
M P+ + F + CA +L +G+ HA +K G + + NSL+++Y K+
Sbjct: 109 RAMLDAGARPDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKL 168
Query: 149 GYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM---LRQGLLPDRFSFA 205
G DA V+ ++VS+N ++ G+V N F+ M L+ G D
Sbjct: 169 GLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVG--HDSVGVI 226
Query: 206 GGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK 265
L C + + L G +H ++ LE + VG +++ +Y K + AE F + +
Sbjct: 227 AALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLR 286
Query: 266 DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
+++WN I + F +M D G + + T ++L ACA S G+ +
Sbjct: 287 TVVTWNCMIGGYALNERPVDAFDCFMQMRVD-GFQVEVVTAINLLTACAQTESSLFGRSV 345
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
HA+++R V + AL+ MY K G + S K+F ++ + +VSWN +IAA+ +
Sbjct: 346 HAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMY 405
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT-YGISPDIEHFT 444
A+ LF ++ + PD T ++ A G +++ + + + K YG S I
Sbjct: 406 QEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLI--MN 463
Query: 445 CLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
++ + R G ++ + E K P G+D I T++
Sbjct: 464 AVMHMYARCGNIVASREIFDKMP-GKDVISWNTII 497
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 204/576 (35%), Positives = 317/576 (55%), Gaps = 7/576 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +L C + G +HA VL+ G +V V N ++ +YAKCG ++ ARKVFD M
Sbjct: 197 TFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSM 256
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ + +SW+AMI+GH + GE LE F M + PN S A + + +
Sbjct: 257 AVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAK 316
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H ++K G+A+ NSLI MY +G A V+ + +S+ A+I+G+ +N
Sbjct: 317 EMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNG 376
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
P+K EV+ LM + PD + A L C+ L G+ LH L S V N
Sbjct: 377 FPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTN 436
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA-CSHCADYEKGLSVFKEMSNDHGV 299
++ +Y+K I +A + F+ + EKD++SW++ IA C + ++E L F+ M D V
Sbjct: 437 ALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFE-ALYYFRHMLAD--V 493
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+P+ TF + LAACA +++ GK+IHAH++R + + + NAL+++Y KCG ++
Sbjct: 494 KPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWA 553
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
F ++VVSWN +IA H G +AL F QM G PD VTF+ LL AC+ G+
Sbjct: 554 QFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRGGM 613
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V EG F+SM Y I P+++H+ C++DLL R G+L EA + + P+ D V G LL
Sbjct: 614 VSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALL 673
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
+ CR+ R V +GE AK + L+P +VLL +LYA G+W +A RK +++ GL
Sbjct: 674 NGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVRKTMREKGLDH 733
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ S +EV+G F + SH +I EIN +L+ +
Sbjct: 734 DSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGI 769
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/406 (30%), Positives = 210/406 (51%), Gaps = 7/406 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+L C +A++ G+ A + + N +L++ + G+ A +VF +M ER
Sbjct: 99 ALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGETWHAWRVFAKMPER 158
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
++ SW+ M+ G+ +AG AL+ + +M + P+ Y F + +C G+ G+++H
Sbjct: 159 DVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVH 218
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A+ L+FG+A V N+L++MY K G A V+ + +S+NA+IAG EN +
Sbjct: 219 AHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFENGECN 278
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
G E+F ML+ + P+ + + +D+ +H L VK ++ N+++
Sbjct: 279 AGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLI 338
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+ ++G+A F ++ +D +SW I+ +K L V+ M ++ V PDD
Sbjct: 339 QMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVNN-VSPDD 397
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T AS LAACA L S+ G ++H V V NAL+ MYAK I + ++F
Sbjct: 398 ITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKC 457
Query: 364 MLHRNVVSWNTIIAAHA-NHRLGGSALKLFEQMKATGIKPDSVTFI 408
M ++VVSW+++IA NHR AL F M A +KP+SVTFI
Sbjct: 458 MPEKDVVSWSSMIAGFCFNHR-NFEALYYFRHMLAD-VKPNSVTFI 501
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 197/607 (32%), Positives = 312/607 (51%), Gaps = 68/607 (11%)
Query: 23 SLHAAVLKMGIQ-PDVIVSNHVLNLYAKCGKMILARKVFDEMS----------------- 64
++H +LK +Q P + NH+L YAK G++ AR+VFDEM
Sbjct: 33 AVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHS 92
Query: 65 --------------ERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASA 106
ER+ VS++A+I+G G +++ + + + P ++
Sbjct: 93 RLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAM 152
Query: 107 ISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNL 166
I + + G +H L+ G+ + +FVG+ L+ MY K+G DA V+ E +
Sbjct: 153 IMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTV 212
Query: 167 VSFNALIAGFVENQQPE-------------------------------KGFEVFKLMLRQ 195
V +N LI G + + E + +VF+ M +
Sbjct: 213 VMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAE 272
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
G+ D+++F L C L +G +H + E N FVG+ ++ +YSK I A
Sbjct: 273 GVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLA 332
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
E FR + +++ISW I A E+ + F EM D G++PDDFT S++++CA
Sbjct: 333 EAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMD-GIKPDDFTLGSVISSCAN 391
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
LAS++ G Q H + L + + V NALV +Y KCG I +++LF+EM + VSW +
Sbjct: 392 LASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTAL 451
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYG 435
+ +A + LFE+M A G+KPD VTFIG+L+AC+ AGLV++G YF+SM+K +G
Sbjct: 452 VTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHG 511
Query: 436 ISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLA 495
I P +H+TC+IDL R+G+ EAEE+ K+ P D TLLS+CRLR ++ IG+ A
Sbjct: 512 IVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAA 571
Query: 496 KQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKF 555
+ L P + YVLL +++A+ G W +VA R+ ++D +KKEP S I+ + F
Sbjct: 572 ENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIF 631
Query: 556 TVAEFSH 562
+ + SH
Sbjct: 632 SADDQSH 638
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 185/399 (46%), Gaps = 47/399 (11%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS---------------- 64
G S+H VL++G V + ++++YAK G + AR+VF EM
Sbjct: 165 GHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLR 224
Query: 65 ---------------ERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASA 106
+R+ ++W+ M++G Q G L AL+ F +M + ++Y F S
Sbjct: 225 CKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSI 284
Query: 107 ISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNL 166
++AC + +L +G+QIHAY + Y FVG++L+ MY K A V+ N+
Sbjct: 285 LTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNI 344
Query: 167 VSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCL 226
+S+ A+I G+ +N E+ F M G+ PD F+ + C+ L +G HCL
Sbjct: 345 ISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCL 404
Query: 227 TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKG 286
+ L V N ++ LY K I +A + F + D +SW + + ++
Sbjct: 405 ALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKET 464
Query: 287 LSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV------ 340
+ +F++M + G++PD TF +L+AC+ V+ G + +D G+
Sbjct: 465 IDLFEKMLAN-GLKPDGVTFIGVLSACSRAGLVEKGCDYFDS-----MQKDHGIVPIDDH 518
Query: 341 GNALVNMYAKCGLISCSYKLFNEMLHR-NVVSWNTIIAA 378
++++Y++ G + + +M H + W T++++
Sbjct: 519 YTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSS 557
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 149/292 (51%), Gaps = 13/292 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S+L C AL++G +HA + + + +V V + ++++Y+KC + LA VF M
Sbjct: 280 TFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+ RN++SW+AMI G+ Q A+ FS+M + P+++ S IS+CA + SL +G
Sbjct: 340 TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGA 399
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q H +L G V N+L+++Y K G DA ++ E + VS+ AL+ G+ +
Sbjct: 400 QFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFG 459
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG- 239
+ ++ ++F+ ML GL PD +F G L CS + + KG C + + V
Sbjct: 460 KAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKG----CDYFDSMQKDHGIVPI 515
Query: 240 ----NTIMALYSKFNLIGEAEKAFR-LIEEKDLISWNTFIAACSHCADYEKG 286
++ LYS+ EAE+ + + D W T +++C + E G
Sbjct: 516 DDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIG 567
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 194/546 (35%), Positives = 297/546 (54%), Gaps = 6/546 (1%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM- 94
+V VS +LN+Y K G + AR+VFD+M RN VSW+AM+SG+ A E F M
Sbjct: 157 NVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAFELFRLML 216
Query: 95 ---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
L NE++ + +SA + L+ G Q+H LK G V NSL++MY K
Sbjct: 217 QECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECM 276
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
A+ V+G + E N ++++A+I G+ +N + + +F M G P F+F G L
Sbjct: 277 DAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNAS 336
Query: 212 SVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF-RLIEEKDLISW 270
S L G H L VK E +V + ++ +Y+K G+A+ F +L + D++ W
Sbjct: 337 SDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIW 396
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
I ++E+ L ++ M + GV P T S+L ACA LA+++ GKQ+HA ++
Sbjct: 397 TAMITGHVQNGEHEEALMLYSRMDKE-GVMPSYLTVTSVLRACACLAALEPGKQLHAQIL 455
Query: 331 RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALK 390
+ VG AL MY+KCG + S +F M R+++SWN+II+ + H G AL
Sbjct: 456 KCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALD 515
Query: 391 LFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLL 450
LFE+MK GI PD +TFI +L AC+H GLV G YF +M K YG+ P ++H+ C++D+L
Sbjct: 516 LFEEMKLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPKLDHYACIVDIL 575
Query: 451 GRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYV 510
RAG+L EA+++ + + + +L ACR RD +G +QL L +S Y+
Sbjct: 576 SRAGQLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSSAYI 635
Query: 511 LLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINY 570
LLSN+YA+ W DV R +++ G+ K+P S +E+ F V E H + +IN
Sbjct: 636 LLSNIYAAQRKWNDVERVRHLMRLRGVSKDPGCSWVELNNQVNVFVVGEQQHPEAEKINV 695
Query: 571 MLKTLS 576
L L+
Sbjct: 696 ELIRLA 701
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 138/496 (27%), Positives = 242/496 (48%), Gaps = 24/496 (4%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMIL--ARKV 59
A+ I L S + + G +LH LK G VSN ++ Y + +L A V
Sbjct: 14 AQFIEHLRCAASSVRTRRAGDALHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAAFAV 73
Query: 60 FDEMSE--RNLVSWSAMIS--GHHQAGEHLLALEFFSQM-----HLLPNEYIFASAISAC 110
F ++ R++ SW+++++ HQ L AL F M +LP + FA+ +A
Sbjct: 74 FADIPAGLRDVASWNSLLNPLSRHQP---LAALSHFRSMMSSTDAVLPTPHSFAAVFTAA 130
Query: 111 AGIQSLVKGQQIHAYSLKFGYASIS---FVGNSLISMYMKVGYSSDALLVYGEAFEPNLV 167
A + S G HA++ K +S S FV +L++MY K+G SDA V+ + N V
Sbjct: 131 ARVPSASAGAVAHAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAV 190
Query: 168 SFNALIAGFVENQQPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCL 226
S+ A+++G+ + E+ FE+F+LML++ L + F L SV L G+ LH L
Sbjct: 191 SWAAMVSGYATGKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGL 250
Query: 227 TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKG 286
+K L V N+++ +Y+K + A F +E++ I+W+ I + + +
Sbjct: 251 VLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCA 310
Query: 287 LSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVN 346
++F +M + G P +FTF IL A + + ++ GKQ H ++++ + V V +ALV+
Sbjct: 311 ATMFLQM-HSAGFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVD 369
Query: 347 MYAKCGLISCSYKLFNEMLH-RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV 405
MYAKCG + F+++ +VV W +I H + AL L+ +M G+ P +
Sbjct: 370 MYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYL 429
Query: 406 TFIGLLTACNHAGLVKEGEAYFNSMEKT-YGISPDIEHFTCLIDLLGRAGKLLEAEEYTK 464
T +L AC ++ G+ + K +G+ + T L + + G L ++ +
Sbjct: 430 TVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVG--TALSTMYSKCGNLEDSMVVFR 487
Query: 465 KFPLGQDPIVLGTLLS 480
+ P +D I +++S
Sbjct: 488 RMP-DRDIISWNSIIS 502
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 191/568 (33%), Positives = 316/568 (55%), Gaps = 4/568 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S LL C+ ++ GI LH V++ G + D V+N ++ +Y+KCG + ARK+FD M
Sbjct: 280 SFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIM 339
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ + V+W+ +I+G+ Q G A+ F M + + FAS + + SL +
Sbjct: 340 PQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCK 399
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H+Y ++ G ++ ++L+ +Y K G A + + ++ A+I+G+V N
Sbjct: 400 EVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNG 459
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ +F+ ++++G++P+ + A L C+ L+ G LHC +K LE+ VG+
Sbjct: 460 LNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGS 519
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+I +Y+K + A + FR + KD + WN I + S E + +F++M G +
Sbjct: 520 SITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTS-GTK 578
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D + ++ L+ACA ++ +GK++H ++R D V + L++MY+KCG ++ + +
Sbjct: 579 FDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSV 638
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+ M +N VSWN+IIAA+ NH L LF +M GI+PD VTF+ +++AC HAGLV
Sbjct: 639 FDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLV 698
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG YF M + YGI +EHF C++DL GRAG+L EA + K P D G+LL
Sbjct: 699 DEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLG 758
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACRL +V + + +K L L P + YVLLSN++A G W V R ++K+ G++K
Sbjct: 759 ACRLHGNVELAKLASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKI 818
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
P YS I+V G F+ A+ H + EI
Sbjct: 819 PGYSWIDVNGGTHMFSAADGCHPQSVEI 846
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 225/453 (49%), Gaps = 5/453 (1%)
Query: 19 QQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGH 78
QQ +HA VL G+ + + + +L +Y C +F + + W+ +I G
Sbjct: 93 QQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGF 152
Query: 79 HQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS 135
G AL FF +M ++ P++Y F I AC G+ ++ + +H + G+
Sbjct: 153 SMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDL 212
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
F+G+SLI +Y GY DA ++ E + + +N ++ G+V+N F+ M
Sbjct: 213 FIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNS 272
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
+ P+ SF L +C+ +R G+ LH L ++ ES+P V NTI+ +YSK + +A
Sbjct: 273 CVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDA 332
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
K F ++ + D ++WN IA ++ +++FK M GV+ D TFAS L +
Sbjct: 333 RKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTS-GVKLDSITFASFLPSVLK 391
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
S+++ K++H++++R + DV + +ALV++Y K G + + K F + +V +
Sbjct: 392 SGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAM 451
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYG 435
I+ + + L AL LF + G+ P+ +T +L AC +K G+ + K G
Sbjct: 452 ISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKK-G 510
Query: 436 ISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
+ + + + + ++G+L A ++ ++ P+
Sbjct: 511 LENVCQVGSSITYMYAKSGRLDLAYQFFRRMPV 543
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 195/568 (34%), Positives = 320/568 (56%), Gaps = 13/568 (2%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L+ G +H V++ G+ V V N ++N+Y K G + AR VF +M+E +LVSW+ MISG
Sbjct: 922 LELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISG 981
Query: 78 HHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK-GQQIHAYSLKFGYAS 133
+G ++ F + LLP+++ AS + AC+ + QIHA ++K G
Sbjct: 982 CALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVL 1041
Query: 134 ISFVGNSLISMYMKVGYSSDA--LLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKL 191
SFV +LI +Y K G +A L V + F+ L S+NA++ G++ + K ++ L
Sbjct: 1042 DSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFD--LASWNAMMHGYIVSGDFPKALRLYIL 1099
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
M G ++ + A + L++G + + VK + FV + ++ +Y K
Sbjct: 1100 MQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGE 1159
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ A + F I D ++W T I+ C E L + M V+PD++TFA+++
Sbjct: 1160 MESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSK-VQPDEYTFATLVK 1218
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
AC+ L +++ G+QIHA+ +++ D V +LV+MYAKCG I + LF + S
Sbjct: 1219 ACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIAS 1278
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
WN +I A H AL+ FE+MK+ G+ PD VTFIG+L+AC+H+GLV E F SM+
Sbjct: 1279 WNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQ 1338
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
K YGI P+IEH++CL+D L RAG++ EAE+ P + TLL+ACR++ D G
Sbjct: 1339 KIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETG 1398
Query: 492 ERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGT 551
+R+A++L L+P+ ++ YVLLSN+YA+ W +VA AR M++ + +KK+P +S ++++
Sbjct: 1399 KRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNK 1458
Query: 552 FEKFTVAEFSHSKI----GEINYMLKTL 575
F + SH + ++ Y++K +
Sbjct: 1459 VHLFVAGDRSHEETDVIYNKVEYIMKRI 1486
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 216/459 (47%), Gaps = 31/459 (6%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE- 65
S+L H L G HA +L G PD ++N+++ +Y+KCG + ARK+FD +
Sbjct: 631 SILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDT 690
Query: 66 -RNLVSWSAMISGHH---QAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQ 121
R+LV+W+A++S H + G HL L + + + A C S +
Sbjct: 691 SRDLVTWNAILSAHADKARDGFHLFRL--LRRSFVSATRHTLAPVFKMCLLSASPSAAES 748
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H Y++K G FV +L+++Y K G +A +++ ++V +N ++ +V+
Sbjct: 749 LHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGL 808
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ +F R GL PD + +C+++ VK K +
Sbjct: 809 EYEALLLFSEFNRTGLRPDDVT------LCTLAR-----------VVKSKQNVLEWQLKQ 851
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+ A +K + + + D+I+WN ++ + + + F +M N V
Sbjct: 852 LKAYGTKLFMYDDDDDG------SDVIAWNKTLSWFLQRGETWEAVDCFVDMINSR-VAC 904
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D TF +L+ AGL ++ GKQIH ++R L+Q V VGN L+NMY K G +S + +F
Sbjct: 905 DGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVF 964
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+M ++VSWNT+I+ A L ++ +F + G+ PD T +L AC+ G
Sbjct: 965 WQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGC 1024
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
++ G+ D T LID+ ++GK+ EAE
Sbjct: 1025 HLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAE 1063
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 176/395 (44%), Gaps = 37/395 (9%)
Query: 94 MHLLPNEY-IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSS 152
+H +P + I AI+A L G++ HA L G+ F+ N+LI+MY K G S
Sbjct: 623 IHSIPQWFSILRHAIAA----SDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLS 678
Query: 153 DALLVYGEAFEP--NLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
A ++ + +LV++NA+++ + + GF +F+L+ R + R + A ++
Sbjct: 679 SARKLFDTTPDTSRDLVTWNAILSAHAD--KARDGFHLFRLLRRSFVSATRHTLAPVFKM 736
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
C +S LH VK L+ + FV ++ +Y+KF I EA F + +D++ W
Sbjct: 737 CLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLW 796
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
N + A + L +F E N G+RPDD T + LA V KQ +++
Sbjct: 797 NVMMKAYVDTGLEYEALLLFSEF-NRTGLRPDDVTLCT-------LARVVKSKQ---NVL 845
Query: 331 RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALK 390
+L Q G L MY S +V++WN ++ A+
Sbjct: 846 EWQLKQLKAYGTKLF-MYDDDDDGS------------DVIAWNKTLSWFLQRGETWEAVD 892
Query: 391 LFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLL 450
F M + + D +TF+ +L+ ++ G+ + ++ G+ + CLI++
Sbjct: 893 CFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRS-GLDQVVSVGNCLINMY 951
Query: 451 GRAGKLLEAEEYTKKFPLGQ-DPIVLGTLLSACRL 484
+ G + A T + + + D + T++S C L
Sbjct: 952 VKTGSVSRAR--TVFWQMNEVDLVSWNTMISGCAL 984
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++L+ CS AL+QG +HA +K+ D V ++++YAKCG + AR +F
Sbjct: 1212 TFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRT 1271
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
+ + SW+AMI G Q G AL+FF +M + P+ F +SAC+
Sbjct: 1272 NTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACS 1322
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 191/572 (33%), Positives = 317/572 (55%), Gaps = 14/572 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
SLL C +K + Q + A ++ G Q + ++ ++ + A +M AR++FD++ +
Sbjct: 43 SLLQSCKTSKQVHQ---IQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDP 99
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
N+ W++M G+ Q+ + + F QM + PN + F + +C I +L++G+Q+H
Sbjct: 100 NIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVH 159
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ +K G+ FVG +LI MY G DA ++ E FE N+V++ ++I G++ +
Sbjct: 160 CFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLV 219
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+F L + ++ +G +E + + RK + H + + + NT++
Sbjct: 220 SARRLFDLAPERDVVLWNIMVSGYIEGGDMV-EARK--LFHEMPNR-----DVMFWNTVL 271
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
Y+ + E F + E+++ SWN I +H + + L FK M ++ V P+D
Sbjct: 272 KGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPND 331
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T ++L+ACA L ++ GK +H + L +V VGNAL++MYAKCG+I + +F
Sbjct: 332 ATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRG 391
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M ++++SWNT+I A H G AL LF QMK G KPD +TFIG+L AC H GLV++G
Sbjct: 392 MDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDG 451
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
AYF SM Y I P IEH+ C++D+L RAG+L +A + +K P+ D ++ LL ACR
Sbjct: 452 FAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGACR 511
Query: 484 LRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSY 543
+ ++V + E ++L L+P + YV+LSN+Y G W DVA + ++D+G KK P
Sbjct: 512 IYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGC 571
Query: 544 SMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S+IEV +F + H +I EI +L+ L
Sbjct: 572 SLIEVNDAVVEFYSLDERHPQIEEIYGVLRGL 603
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 169/358 (47%), Gaps = 18/358 (5%)
Query: 100 EYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG 159
E F S + +C + + QI A + G+ ++ L+++ + + A ++
Sbjct: 38 EERFISLLQSCKTSKQV---HQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFD 94
Query: 160 EAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRK 219
+ +PN+ +N++ G+ +++ + +F M + P+ F+F L+ C N L +
Sbjct: 95 QIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIE 154
Query: 220 GMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSH 279
G +HC +KC NPFVG T++ +YS +G+A K F + E+++++W + I
Sbjct: 155 GEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYIL 214
Query: 280 CADYEKGLSVFKEMSNDHGVRPD-DFTFASILAACAGLASVQHGKQIHAH-LIRMRLNQD 337
AD +F + P+ D +I+ + ++ G + A L N+D
Sbjct: 215 SADLVSARRLFD-------LAPERDVVLWNIMVS----GYIEGGDMVEARKLFHEMPNRD 263
Query: 338 VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-K 396
V N ++ YA G + LF EM RN+ SWN +I +A++ L L F++M
Sbjct: 264 VMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLS 323
Query: 397 ATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
+ + P+ T + +L+AC G + G+ + + ++ G+ ++ L+D+ + G
Sbjct: 324 ESDVPPNDATLVTVLSACARLGALDLGK-WVHVYAESSGLKGNVYVGNALMDMYAKCG 380
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L C++ AL G +H G++ +V V N ++++YAKCG + A VF M
Sbjct: 333 TLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGM 392
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
++L+SW+ +I G AL F QM P+ F + AC
Sbjct: 393 DTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACT 443
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 200/603 (33%), Positives = 328/603 (54%), Gaps = 31/603 (5%)
Query: 4 SISSLLHHCSKTKA-LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++ S+ H CS + ++ G +HA L+ G +N ++ +YA+ G++ A+ +F
Sbjct: 435 TLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKALFGV 493
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
++LVSW+ +IS Q AL + M + P+ AS + AC+ ++ L G
Sbjct: 494 FDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIG 553
Query: 120 QQIHAYSLKFG-YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
++IH Y+L+ G SFVG +L+ MY LV+ + +NAL+AG+
Sbjct: 554 REIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYAR 613
Query: 179 NQQPEKGFEVFKLMLRQG-LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
N+ ++ +F M+ + P+ +FA L C +H VK + +
Sbjct: 614 NEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKY 673
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS--- 294
V N +M +YS+ + ++ F + ++D++SWNT I C C Y+ L++ EM
Sbjct: 674 VQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQ 733
Query: 295 ------------NDHGV--RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV 340
+D GV +P+ T ++L CA LA++ GK+IHA+ ++ +L DV V
Sbjct: 734 GEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAV 793
Query: 341 GNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG- 399
G+ALV+MYAKCG ++ + ++F++M RNV++WN +I A+ H G AL+LF M A G
Sbjct: 794 GSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGG 853
Query: 400 -----IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
I+P+ VT+I + AC+H+G+V EG F++M+ ++G+ P +H+ CL+DLLGR+G
Sbjct: 854 SNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSG 913
Query: 455 KLLEAEEYTKKFPLGQDPI-VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLS 513
++ EA E P + + +LL ACR+ + V GE AK LF L+P S YVL+S
Sbjct: 914 RVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMS 973
Query: 514 NLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLK 573
N+Y+S G+W G RK +K+ G++KEP S IE KF + SH + E++ L+
Sbjct: 974 NIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKELHEYLE 1033
Query: 574 TLS 576
TLS
Sbjct: 1034 TLS 1036
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 136/474 (28%), Positives = 234/474 (49%), Gaps = 29/474 (6%)
Query: 21 GISLHAAVLKMGIQP--DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGH 78
G +HA V K G P V V+N ++N+Y KCG + AR+VFD++ +R+ VSW++MI+
Sbjct: 349 GKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATL 408
Query: 79 HQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK-GQQIHAYSLKFGYASI 134
+ E L+L F M ++ P + S AC+ ++ V+ G+Q+HAY+L+ G
Sbjct: 409 CRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLR- 467
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
++ N+L++MY ++G +DA ++G +LVS+N +I+ +N + E+ LM+
Sbjct: 468 TYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIV 527
Query: 195 QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK-CKLESNPFVGNTIMALYSKFNLIG 253
G+ PD + A L CS LR G +HC ++ L N FVG ++ +Y
Sbjct: 528 DGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPK 587
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
+ F + + + WN +A + ++ L +F EM ++ P+ TFAS+L AC
Sbjct: 588 KGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPAC 647
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
+ IH ++++ +D V NAL++MY++ G + S +F M R++VSWN
Sbjct: 648 VRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWN 707
Query: 374 TIIAA--------------HANHRL----GGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
T+I H R G +E KP+SVT + +L C
Sbjct: 708 TMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCA 767
Query: 416 H-AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
A L K E + ++++ + D+ + L+D+ + G L A + P+
Sbjct: 768 ALAALGKGKEIHAYAVKQKLAM--DVAVGSALVDMYAKCGCLNLASRVFDQMPI 819
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 200/389 (51%), Gaps = 9/389 (2%)
Query: 99 NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS--FVGNSLISMYMKVGYSSDALL 156
+ + F + + A A + L G+QIHA+ KFG+A S V NSL++MY K G + A
Sbjct: 329 DNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQ 388
Query: 157 VYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS-VSN 215
V+ + + + VS+N++IA ++ E +F+LML + + P F+ CS V
Sbjct: 389 VFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRG 448
Query: 216 DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIA 275
+R G +H T++ + + N ++ +Y++ + +A+ F + + KDL+SWNT I+
Sbjct: 449 GVRLGKQVHAYTLR-NGDLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVIS 507
Query: 276 ACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM-RL 334
+ S +E+ L M D GVRPD T AS+L AC+ L ++ G++IH + +R L
Sbjct: 508 SLSQNDRFEEALMYVYLMIVD-GVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDL 566
Query: 335 NQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF-E 393
++ VG ALV+MY C +F+ ++ R V WN ++A +A + AL+LF E
Sbjct: 567 IENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVE 626
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 453
+ + P++ TF +L AC + + E + K G D L+D+ R
Sbjct: 627 MISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKR-GFGKDKYVQNALMDMYSRM 685
Query: 454 GKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G++ ++ + +D + T+++ C
Sbjct: 686 GRVEISKTIFGRMN-KRDIVSWNTMITGC 713
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 145/309 (46%), Gaps = 36/309 (11%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +S+L C + K +H ++K G D V N ++++Y++ G++ +++ +F
Sbjct: 637 ATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFG 696
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---------------------LLPNE 100
M++R++VSW+ MI+G G + AL +M PN
Sbjct: 697 RMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNS 756
Query: 101 YIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGE 160
+ + CA + +L KG++IHAY++K A VG++L+ MY K G + A V+ +
Sbjct: 757 VTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQ 816
Query: 161 AFEPNLVSFNALIAGFVENQQPEKGFEVFKLML------RQGLLPDRFSFAGGLEICSVS 214
N++++N LI + + + E+ E+F++M R+ + P+ ++ CS S
Sbjct: 817 MPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHS 876
Query: 215 NDLRKGM-ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE-----KDLI 268
+ +G+ + H + +E G+ L G ++A+ LI +
Sbjct: 877 GMVDEGLHLFHTMKASHGVEPR---GDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVD 933
Query: 269 SWNTFIAAC 277
+W++ + AC
Sbjct: 934 AWSSLLGAC 942
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 109/225 (48%), Gaps = 11/225 (4%)
Query: 262 IEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQH 321
+E + W + + +H + + +S + M D+F F ++L A A + +
Sbjct: 290 VERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPP-DNFAFPAVLKAAAAVHDLCL 348
Query: 322 GKQIHAHLIRM--RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
GKQIHAH+ + V V N+LVNMY KCG ++ + ++F+++ R+ VSWN++IA
Sbjct: 349 GKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATL 408
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI-SP 438
+L LF M + + P S T + + AC+H G Y + +
Sbjct: 409 CRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHV----RGGVRLGKQVHAYTLRNG 464
Query: 439 DIEHFT--CLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
D+ +T L+ + R G++ +A+ F G+D + T++S+
Sbjct: 465 DLRTYTNNALVTMYARLGRVNDAKALFGVFD-GKDLVSWNTVISS 508
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 191/572 (33%), Positives = 321/572 (56%), Gaps = 17/572 (2%)
Query: 13 SKTKALQQGISLHAAVLKMGIQP--------DVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+ TK L G S+H +L ++I N ++NLY KC K+ LAR +FDEMS
Sbjct: 23 ANTKNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMS 82
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
R++VS++ ++ G+ +GEHL ++ F M PNEY+F + +SACA + +G Q
Sbjct: 83 LRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQ 142
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV----YGEAFEPN-LVSFNALIAGF 176
H + KFG FV +SL+ MY K + AL V +G N +N+++
Sbjct: 143 CHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNAL 202
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
VE+ + + EV M+ +G++ D ++ + +C DL G+ +H +K L +
Sbjct: 203 VESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDV 262
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
FVG+ ++ ++ K + A K F ++ ++++ W + + A ++E+ L++ M +
Sbjct: 263 FVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDRE 322
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
G ++FTFA +L A AG+A+++HG +HA + ++ + V VGNAL+NMY+KCG I
Sbjct: 323 -GTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDS 381
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
SY +F +M +R++++WN +I ++ H LG AL LF+ M + G P+ VTF+G+L+AC H
Sbjct: 382 SYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAH 441
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
LV EG Y N + K + + P +EH+TC++ +L RAG L EAE + + + D +
Sbjct: 442 LALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWR 501
Query: 477 TLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSG 536
LL+AC + R+ +G ++A+ + + P Y LLSN+YA W V RKM+++
Sbjct: 502 VLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTLLSNMYAKARSWDSVTMIRKMMRERN 561
Query: 537 LKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
+KKEP S IE++ F+ +H + +I
Sbjct: 562 VKKEPGVSWIEIRNAVHVFSSDGSNHPECIQI 593
>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
Length = 700
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 185/559 (33%), Positives = 316/559 (56%), Gaps = 9/559 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S +L CS+ + +G LH ++K+G PD V ++++YAKC ++ +R+VFDE+ +
Sbjct: 142 SIVLKACSELRETDEGRKLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVFDEILD 200
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
RN+V W++MI G+ Q L F++M + N+Y S ++AC + +L +G+ +
Sbjct: 201 RNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWV 260
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H Y +K G+ SF+ L+ +Y K G DA V+ E +LVS+ A+I G+ + P
Sbjct: 261 HGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYP 320
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
+ ++F + LLP+ + + L C+ + L G +HCL +K E F N +
Sbjct: 321 REALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSEDATF-ENAL 379
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y+K ++IG+A F + +KD+I+WN+ I+ + + L +F +M +D V PD
Sbjct: 380 VDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSD-SVYPD 438
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKCGLISCSYKLF 361
T S+L+ACA + + + G +H + I+ L+ V VG AL+N YAKCG + +F
Sbjct: 439 AITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIF 498
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+EM +N ++W+ +I + +L+LF M ++P+ V F +L+AC+H+G++
Sbjct: 499 DEMGEKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLG 558
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
EG YFN+M + Y P ++H+ C++DLL RAG+L EA ++ +K P+ D +LG L
Sbjct: 559 EGWRYFNTMCQVYNFVPSMKHYACMVDLLARAGRLEEALDFIEKIPIQPDVSLLGAFLHG 618
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
CRL +GE +++ L P YVL+SNLYAS+G W +++K GL K P
Sbjct: 619 CRLHSRFDLGEVAVRRMLELHPDKACYYVLMSNLYASEGRWSQANQVMELMKQRGLAKLP 678
Query: 542 SYSMIEVQGT--FEKFTVA 558
+S+++++ + F VA
Sbjct: 679 GWSLVDIETSNDFSPLIVA 697
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 234/453 (51%), Gaps = 12/453 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
SLL C +L++ +HA ++ G+ D++ +++LY G + AR +FD +
Sbjct: 44 SLLGICKTVSSLRK---IHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNP 100
Query: 67 NLVSWSAMISGHHQAGEHLLALEFF-SQMHLLPNEY---IFASAISACAGIQSLVKGQQI 122
+L SW MI + + ++F+ +++ NEY +F+ + AC+ ++ +G+++
Sbjct: 101 DLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKL 160
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H +K G + SFV L+ MY K D+ V+ E + N+V + ++I G+V+N
Sbjct: 161 HCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCL 219
Query: 183 EKGFEVFKLMLRQGLLP-DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
++G +F M R+GL+ ++++ + C+ L +G +H +K + N F+
Sbjct: 220 KEGLVLFNRM-REGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTP 278
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ LY K I +A F + DL+SW I + + L +F + + P
Sbjct: 279 LLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTD-ERWKDLLP 337
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
+ T +S+L+ACA S+ G+ +H I++ ++D NALV+MYAKC +I + +F
Sbjct: 338 NTVTTSSVLSACAQTGSLNMGRSVHCLGIKLG-SEDATFENALVDMYAKCHMIGDARYVF 396
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ ++V++WN+II+ + + AL+LF+QM++ + PD++T + +L+AC G +
Sbjct: 397 ETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYR 456
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
G + K +S + T L++ + G
Sbjct: 457 VGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCG 489
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 166/318 (52%), Gaps = 12/318 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ SL+ C+K AL QG +H V+K G + + +L+LY KCG + A VFDE+
Sbjct: 240 TLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDEL 299
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
S +LVSW+AMI G+ Q G AL+ F+ LLPN +S +SACA SL G+
Sbjct: 300 STIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGR 359
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H +K G +F N+L+ MY K DA V+ F+ +++++N++I+G+ +N
Sbjct: 360 SVHCLGIKLGSEDATF-ENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNG 418
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP-FVG 239
+ E+F M + PD + L C+ R G LH +K L S +VG
Sbjct: 419 YAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVG 478
Query: 240 NTIMALYSKFNLIGEAEKA---FRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
++ Y+K G+AE A F + EK+ I+W+ I D + L +F +M +
Sbjct: 479 TALLNFYAK---CGDAESARVIFDEMGEKNTITWSAMIGGYGIQGDCSRSLELFGDMLKE 535
Query: 297 HGVRPDDFTFASILAACA 314
+ P++ F +IL+AC+
Sbjct: 536 K-LEPNEVIFTTILSACS 552
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 190/561 (33%), Positives = 330/561 (58%), Gaps = 9/561 (1%)
Query: 22 ISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQA 81
+ +H V+K+G + +++V N +++ Y K + LA ++F M ++ V+++++++G+
Sbjct: 160 VQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNE 219
Query: 82 GEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVG 138
G + A+E F ++H + P+++ FA+ +SA G+ GQQ+H + LK + FVG
Sbjct: 220 GLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVG 279
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL 198
N+L+ Y K + ++ E E + +S+N +I + N Q ++ F++F+ +
Sbjct: 280 NALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFD 339
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHC--LTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
+F FA L I + S +LR G +HC +TV ES V N ++ +Y+K N EA+
Sbjct: 340 RRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESR--VENALVDMYAKCNGDKEAQ 397
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
K F I K + W I+A +E+G++VF +M GV D TFASIL ACA L
Sbjct: 398 KIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRT-GVPADQATFASILRACANL 456
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
AS+ G+Q+H+ LIR +V G+AL++ YAKCG ++ + K F EM RN VSWN +I
Sbjct: 457 ASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALI 516
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
+A+A + L F+QM +G KPDSV+F+ +L+AC+H G V+E +FNSM + Y +
Sbjct: 517 SAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEV 576
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAK 496
+P EH+T ++D+L R G+ EAE+ + P I+ ++L++CR+ ++ + ++ A
Sbjct: 577 TPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAAD 636
Query: 497 QLFHLQP-TTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKF 555
+LF+++ +PY+ +SN+YA G W +VA +K ++D G++K P+YS +E++ F
Sbjct: 637 RLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVF 696
Query: 556 TVAEFSHSKIGEINYMLKTLS 576
+ + SH ++ +I + LS
Sbjct: 697 SANDKSHPEMKKILRKINALS 717
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/468 (26%), Positives = 224/468 (47%), Gaps = 7/468 (1%)
Query: 18 LQQGISLHA-AVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMIS 76
L++G +HA V + I N +++ + K GK+ AR++FD M ER VSW+ +I
Sbjct: 54 LERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIG 113
Query: 77 GHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYAS 133
G+ Q+ + A ++ M + P+ + +S +++ QIH + +K GY
Sbjct: 114 GYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEY 173
Query: 134 ISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLML 193
V NSL+ Y K A ++ + V+FN+L+ G+ E+ E+F +
Sbjct: 174 NLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELH 233
Query: 194 RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
G+ P F+FA L +D + G +H +K N FVGN ++ YSK + +
Sbjct: 234 NSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVD 293
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
E K F + E D IS+N I + + +++ +F+++ R F FA++L+
Sbjct: 294 EVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDR-RQFPFATLLSIA 352
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
+++ G+QIH I + N + V NALV+MYAKC + K+F+ + ++ V W
Sbjct: 353 TSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWT 412
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT 433
+I+A+ + +F M+ TG+ D TF +L AC + + G +S+
Sbjct: 413 AMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQ-LHSLLIR 471
Query: 434 YGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
G ++ + L+D + G + +A + + P ++ + L+SA
Sbjct: 472 SGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMP-ERNSVSWNALISA 518
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 118/210 (56%), Gaps = 3/210 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
++LL + + L+ G +H + +G + V N ++++YAKC A+K+FD ++
Sbjct: 346 ATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIAC 405
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
++ V W+AMIS + Q G+H + FS M + ++ FAS + ACA + S+ G+Q+
Sbjct: 406 KSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQL 465
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H+ ++ G+ S + G++L+ Y K G +DA+ +GE E N VS+NALI+ + +N
Sbjct: 466 HSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNV 525
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
+ F+ M++ G PD SF L CS
Sbjct: 526 DGTLNSFQQMIQSGYKPDSVSFLSVLSACS 555
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 154/335 (45%), Gaps = 44/335 (13%)
Query: 115 SLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNA--- 171
SL I A+ +K G+ + N ++ +++ G A V+ + N +S N
Sbjct: 23 SLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMIS 82
Query: 172 ----------------------------LIAGFVENQQPEKGFEVFKLMLRQGLLPDRFS 203
LI G++++ Q ++ F ++ M R G+ PD +
Sbjct: 83 GHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVT 142
Query: 204 FA------GGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
G LE +V + +H +K E N V N+++ Y K + + A +
Sbjct: 143 LVTLLSGFGELETKNVI------VQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQ 196
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F+ + KD +++N+ + S+ E+ + +F E+ N G++P DFTFA++L+A GL
Sbjct: 197 LFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNS-GIKPSDFTFAALLSAAVGLD 255
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
+ G+Q+H +++ +V VGNAL++ Y+K + KLF EM + +S+N +I
Sbjct: 256 DTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVIT 315
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
++A + + LF +++ T F LL+
Sbjct: 316 SYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLS 350
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 107/202 (52%), Gaps = 2/202 (0%)
Query: 213 VSNDLRKGMILHCLTVKCKLES-NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
V+N L +G ++H V ++ + N N +++ + KF + +A + F + E+ +SW
Sbjct: 50 VNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWT 109
Query: 272 TFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
I ++ ++ +M G+ PD T ++L+ L + QIH H+I+
Sbjct: 110 ILIGGYLQSNQSKEAFRLYADMRRG-GIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIK 168
Query: 332 MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
+ ++ V N+LV+ Y K + + +LF ML+++ V++N+++ ++N L A++L
Sbjct: 169 LGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIEL 228
Query: 392 FEQMKATGIKPDSVTFIGLLTA 413
F ++ +GIKP TF LL+A
Sbjct: 229 FLELHNSGIKPSDFTFAALLSA 250
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L C+ ++ G LH+ +++ G +V + +L+ YAKCG M A K F EM
Sbjct: 445 TFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEM 504
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
ERN VSW+A+IS + Q G L F QM P+ F S +SAC+
Sbjct: 505 PERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACS 555
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 197/607 (32%), Positives = 312/607 (51%), Gaps = 68/607 (11%)
Query: 23 SLHAAVLKMGIQ-PDVIVSNHVLNLYAKCGKMILARKVFDEMS----------------- 64
++H +LK +Q P + NH+L YAK G++ AR+VFDEM
Sbjct: 33 AVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHS 92
Query: 65 --------------ERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASA 106
ER+ VS++A+I+G G +++ + + + P ++
Sbjct: 93 RLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAM 152
Query: 107 ISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNL 166
I + + G +H L+ G+ + +FVG+ L+ MY K+G DA V+ E +
Sbjct: 153 IMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTV 212
Query: 167 VSFNALIAGFVENQQPE-------------------------------KGFEVFKLMLRQ 195
V +N LI G + + E + +VF+ M +
Sbjct: 213 VMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAE 272
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
G+ D+++F L C L +G +H + E N FVG+ ++ +YSK I A
Sbjct: 273 GVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLA 332
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
E FR + +++ISW I A E+ + F EM D G++PDDFT S++++CA
Sbjct: 333 EAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMD-GIKPDDFTLGSVISSCAN 391
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
LAS++ G Q H + L + + V NALV +Y KCG I +++LF+EM + VSW +
Sbjct: 392 LASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTAL 451
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYG 435
+ +A + LFE+M A G+KPD VTFIG+L+AC+ AGLV++G YF+SM+K +G
Sbjct: 452 VTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHG 511
Query: 436 ISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLA 495
I P +H+TC+IDL R+G+ EAEE+ K+ P D TLLS+CRLR ++ IG+ A
Sbjct: 512 IVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAA 571
Query: 496 KQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKF 555
+ L P + YVLL +++A+ G W +VA R+ ++D +KKEP S I+ + F
Sbjct: 572 ENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIF 631
Query: 556 TVAEFSH 562
+ + SH
Sbjct: 632 SADDQSH 638
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 185/399 (46%), Gaps = 47/399 (11%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS---------------- 64
G S+H VL++G V + ++++YAK G + AR+VF EM
Sbjct: 165 GHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLR 224
Query: 65 ---------------ERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASA 106
+R+ ++W+ M++G Q G L AL+ F +M + ++Y F S
Sbjct: 225 CKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSI 284
Query: 107 ISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNL 166
++AC + +L +G+QIHAY + Y FVG++L+ MY K A V+ N+
Sbjct: 285 LTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNI 344
Query: 167 VSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCL 226
+S+ A+I G+ +N E+ F M G+ PD F+ + C+ L +G HCL
Sbjct: 345 ISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCL 404
Query: 227 TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKG 286
+ L V N ++ LY K I +A + F + D +SW + + ++
Sbjct: 405 ALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKET 464
Query: 287 LSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV------ 340
+ +F++M + G++PD TF +L+AC+ V+ G + +D G+
Sbjct: 465 IDLFEKMLAN-GLKPDGVTFIGVLSACSRAGLVEKGCDYFDS-----MQKDHGIVPIDDH 518
Query: 341 GNALVNMYAKCGLISCSYKLFNEMLHR-NVVSWNTIIAA 378
++++Y++ G + + +M H + W T++++
Sbjct: 519 YTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSS 557
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 149/292 (51%), Gaps = 13/292 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S+L C AL++G +HA + + + +V V + ++++Y+KC + LA VF M
Sbjct: 280 TFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+ RN++SW+AMI G+ Q A+ FS+M + P+++ S IS+CA + SL +G
Sbjct: 340 TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGA 399
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q H +L G V N+L+++Y K G DA ++ E + VS+ AL+ G+ +
Sbjct: 400 QFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFG 459
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG- 239
+ ++ ++F+ ML GL PD +F G L CS + + KG C + + V
Sbjct: 460 KAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKG----CDYFDSMQKDHGIVPI 515
Query: 240 ----NTIMALYSKFNLIGEAEKAFR-LIEEKDLISWNTFIAACSHCADYEKG 286
++ LYS+ EAE+ + + D W T +++C + E G
Sbjct: 516 DDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIG 567
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 207/577 (35%), Positives = 318/577 (55%), Gaps = 29/577 (5%)
Query: 10 HHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLV 69
HHC G ++H + G+Q D+ VS +L++Y KC + A +F M R+LV
Sbjct: 141 HHC--------GRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLV 192
Query: 70 SWSAMISG------HHQAGEHLLALEFFSQMH-LLPNEYIFASAISACAGIQSLVKGQQI 122
+W+AM++G +H A HLL+++ QMH L PN + + A +L +G +
Sbjct: 193 AWNAMLAGYAHHGMYHHAVAHLLSMQM--QMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 123 HAYSLKFGYASIS----------FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
HAY ++ S +G +L+ MY K G A V+ N V+++AL
Sbjct: 251 HAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310
Query: 173 IAGFVENQQPEKGFEVFKLMLRQGL-LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK 231
I GFV + + F +FK ML QGL S A L C+ + LR G LH L K
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370
Query: 232 LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK 291
+ ++ GN+++++Y+K LI +A F + KD +S++ ++ E+ VFK
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
+M + V PD T S++ AC+ LA++QHG+ H +I L + + NAL++MYAKC
Sbjct: 431 KMQACN-VEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKC 489
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
G I S ++FN M R++VSWNT+IA + H LG A LF +M G PD VTFI LL
Sbjct: 490 GRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLL 549
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQD 471
+AC+H+GLV EG+ +F+ M YG++P +EH+ C++DLL R G L EA E+ + PL D
Sbjct: 550 SACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRAD 609
Query: 472 PIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKM 531
V LL ACR+ +++ +G+++++ + L P T +VLLSN+Y++ G + + A R +
Sbjct: 610 VRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRII 669
Query: 532 LKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
K G KK P S IE+ G+ F + SH + EI
Sbjct: 670 QKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEI 706
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 214/447 (47%), Gaps = 19/447 (4%)
Query: 51 GKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLA--LEFFSQM---HLLPNEYIFAS 105
G + A +FD++ ++ +++ +I + + A L + +M + PN Y F
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 106 AISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPN 165
A+ AC+ + G+ IH +++ G + FV +L+ MY+K DA ++ +
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 166 LVSFNALIAGFVENQQPEKGFEVFKLMLRQ--GLLPDRFSFAGGLEICSVSNDLRKGMIL 223
LV++NA++AG+ + M Q L P+ + L + + L +G +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 224 HCLTVKCKLESNP----------FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTF 273
H ++ L SN +G ++ +Y+K + A + F + ++ ++W+
Sbjct: 251 HAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310
Query: 274 IAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR 333
I C+ + +FK M + AS L ACA L ++ G+Q+HA L +
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370
Query: 334 LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFE 393
++ D+ GN+L++MYAK GLI + LF+EM ++ VS++ +++ + + A +F+
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 453
+M+A ++PD+ T + L+ AC+H ++ G S+ G++ + LID+ +
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSV-IIRGLASETSICNALIDMYAKC 489
Query: 454 GKLLEAEEYTKKFPLGQDPIVLGTLLS 480
G++ + + P +D + T+++
Sbjct: 490 GRIDLSRQVFNMMP-SRDIVSWNTMIA 515
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 155/331 (46%), Gaps = 19/331 (5%)
Query: 145 YMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ--PEKGFEVFKLMLRQGLLPDRF 202
++ G+ S A ++ + P++ ++N LI + + G +++ MLR + P+ +
Sbjct: 67 HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126
Query: 203 SFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLI 262
+F L+ CS D G +H + L+++ FV ++ +Y K + +A F +
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186
Query: 263 EEKDLISWNTFIAACSHCADYEKGLSVFKEMSND-HGVRPDDFTFASILAACAGLASVQH 321
+DL++WN +A +H Y ++ M H +RP+ T ++L A ++
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246
Query: 322 GKQIHAHLIRM----------RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
G +HA+ IR +L V +G AL++MYAKCG + + ++F+ M RN V+
Sbjct: 247 GTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 306
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATG---IKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
W+ +I A LF+ M A G + P S+ L AC ++ GE
Sbjct: 307 WSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRMGEQLHA 364
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+ K+ G+ D+ L+ + +AG + +A
Sbjct: 365 LLAKS-GVHADLTAGNSLLSMYAKAGLIDQA 394
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 128/274 (46%), Gaps = 20/274 (7%)
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYE--KGLSVFKEMSNDHGVRPDDFTFASI 309
+ A F I D+ ++N I A S + GL +++ M H V P+++TF
Sbjct: 73 LSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLR-HRVAPNNYTFPFA 131
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
L AC+ LA G+ IH H I L D+ V AL++MY KC + + +F M R++
Sbjct: 132 LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDL 191
Query: 370 VSWNTIIAAHANHRLGGSALK--LFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA-- 425
V+WN ++A +A+H + A+ L QM+ ++P++ T + LL G + +G +
Sbjct: 192 VAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVH 251
Query: 426 --------YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQD----PI 473
+ N K+ ++ + T L+D+ + G LL A P + +
Sbjct: 252 AYRIRACLHSNRNSKS-KLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTS 507
+ G +L + + ++ LA+ L L PT+ +
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA 344
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 77/133 (57%), Gaps = 4/133 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++ SL+ CS ALQ G H +V+ G+ + + N ++++YAKCG++ L+R+VF+
Sbjct: 441 AATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFN 500
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVK 118
M R++VSW+ MI+G+ G A F +M+ L P+ F +SAC+ +++
Sbjct: 501 MMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIE 560
Query: 119 GQQIHAYSLKFGY 131
G+ + ++ GY
Sbjct: 561 GKHWF-HVMRHGY 572
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 190/579 (32%), Positives = 329/579 (56%), Gaps = 7/579 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQ--PDVIVSNHVLNLYAKCGKMILARKVFD 61
+ ++LL C+ +HA +K+G P + VSN +L Y + ++ LA +F+
Sbjct: 149 TFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFE 208
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVK 118
E+ E++ V+++ +I+G+ + G + ++ F +M P+++ F+ + A G+
Sbjct: 209 EIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFAL 268
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
GQQ+HA S+ G++ + VGN ++ Y K + +++ E E + VS+N +I+ + +
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
Q E F+ M G F FA L I + + L+ G LHC + +S V
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV 388
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
GN+++ +Y+K + EAE F+ + ++ +SW I+ + GL +F +M +
Sbjct: 389 GNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN- 447
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+R D TFA++L A A AS+ GKQ+HA +IR ++V G+ LV+MYAKCG I +
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
++F EM RN VSWN +I+AHA++ G +A+ F +M +G++PDSV+ +G+LTAC+H G
Sbjct: 508 QVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 567
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
V++G YF +M YGI+P +H+ C++DLLGR G+ EAE+ + P D I+ ++
Sbjct: 568 FVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSV 627
Query: 479 LSACRLRRDVVIGERLAKQLFHLQP-TTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
L+ACR+ ++ + ER A++LF ++ + YV +SN+YA+ G W V +K +++ G+
Sbjct: 628 LNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGI 687
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
KK P+YS +EV F+ + +H EI + L+
Sbjct: 688 KKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELT 726
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 138/507 (27%), Positives = 234/507 (46%), Gaps = 63/507 (12%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+ A ++K G D SN ++ + G++ ARKV+DEM +N VS + MISGH + G+
Sbjct: 35 VDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGD 94
Query: 84 HLLALEFFSQMH------------------------------------LLPNEYIFASAI 107
A + F M LP+ F + +
Sbjct: 95 VSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLL 154
Query: 108 SACAGIQSLVKGQQIHAYSLKFGYASISF--VGNSLISMYMKVGYSSDALLVYGEAFEPN 165
C Q+HA+++K G+ + F V N L+ Y +V A +++ E E +
Sbjct: 155 PGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKD 214
Query: 166 LVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHC 225
V+FN LI G+ ++ + +F M + G P F+F+G L+ +D G LH
Sbjct: 215 SVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHA 274
Query: 226 LTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEK 285
L+V + VGN I+ YSK + + E F + E D +S+N I++ S YE
Sbjct: 275 LSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEA 334
Query: 286 GLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALV 345
L F+EM G +F FA++L+ A L+S+Q G+Q+H + + + VGN+LV
Sbjct: 335 SLHFFREMQC-MGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLV 393
Query: 346 NMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV 405
+MYAKC + + +F + R VSW +I+ + L G+ LKLF +M+ + ++ D
Sbjct: 394 DMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQS 453
Query: 406 TFIGLLTACN-----------HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
TF +L A HA +++ G ++E + S L+D+ + G
Sbjct: 454 TFATVLKASASFASLLLGKQLHAFIIRSG-----NLENVFSGSG-------LVDMYAKCG 501
Query: 455 KLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+ +A + ++ P ++ + L+SA
Sbjct: 502 SIKDAVQVFEEMP-DRNAVSWNALISA 527
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 33/128 (25%)
Query: 323 KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH--- 379
+++ A +I+ + D N +V + G +S + K+++EM H+N VS NT+I+ H
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 380 ----------------------------ANHRLGGSALKLFEQM--KATGIKPDSVTFIG 409
A + A KLF QM ++ PD VTF
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 410 LLTACNHA 417
LL CN A
Sbjct: 153 LLPGCNDA 160
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 210/585 (35%), Positives = 322/585 (55%), Gaps = 30/585 (5%)
Query: 3 KSISSLL-HHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
K+ S+L HHC G ++H + G+Q D+ VS +L++Y KC + A +F
Sbjct: 18 KACSALADHHC--------GRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFA 69
Query: 62 EMSERNLVSWSAMISG------HHQAGEHLLALEFFSQMH-LLPNEYIFASAISACAGIQ 114
M R+LV+W+AM++G +H A HLL+++ QMH L PN + + A
Sbjct: 70 TMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQM--QMHRLRPNASTLVALLPLLAQQG 127
Query: 115 SLVKGQQIHAYSL----------KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEP 164
+L +G +HAY + K +G +L+ MY K G A V+
Sbjct: 128 ALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR 187
Query: 165 NLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL-LPDRFSFAGGLEICSVSNDLRKGMIL 223
N V+++ALI GFV + + F +FK ML QGL S A L C+ + LR G L
Sbjct: 188 NEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQL 247
Query: 224 HCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY 283
H L K + ++ GN+++++Y+K LI +A F + KD +S++ ++
Sbjct: 248 HALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRA 307
Query: 284 EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA 343
E+ VFK+M + V PD T S++ AC+ LA++QHG+ H +I L + + NA
Sbjct: 308 EEAFLVFKKMQACN-VEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNA 366
Query: 344 LVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPD 403
L++MYAKCG I S ++FN M R++VSWNT+IA + H LG A LF +M G PD
Sbjct: 367 LIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPD 426
Query: 404 SVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYT 463
VTFI LL+AC+H+GLV EG+ +F+ M YG++P +EH+ C++DLL R G L EA E+
Sbjct: 427 GVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFI 486
Query: 464 KKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWG 523
+ PL D V LL ACR+ +++ +G+++++ + L P T +VLLSN+Y++ G +
Sbjct: 487 QSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFD 546
Query: 524 DVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
+ A R + K G KK P S IE+ G+ F + SH + EI
Sbjct: 547 EAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEI 591
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 190/395 (48%), Gaps = 14/395 (3%)
Query: 98 PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV 157
PN Y F A+ AC+ + G+ IH +++ G + FV +L+ MY+K DA +
Sbjct: 8 PNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHI 67
Query: 158 YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ--GLLPDRFSFAGGLEICSVSN 215
+ +LV++NA++AG+ + M Q L P+ + L + +
Sbjct: 68 FATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQG 127
Query: 216 DLRKGMILHCLTV----------KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK 265
L +G +H + K KL +G ++ +Y+K + A + F + +
Sbjct: 128 ALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR 187
Query: 266 DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
+ ++W+ I C+ + +FK M + AS L ACA L ++ G+Q+
Sbjct: 188 NEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQL 247
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
HA L + ++ D+ GN+L++MYAK GLI + LF+EM ++ VS++ +++ + +
Sbjct: 248 HALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRA 307
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
A +F++M+A ++PD+ T + L+ AC+H ++ G S+ G++ +
Sbjct: 308 EEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSV-IIRGLASETSICNA 366
Query: 446 LIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
LID+ + G++ + + P +D + T+++
Sbjct: 367 LIDMYAKCGRIDLSRQVFNMMP-SRDIVSWNTMIA 400
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 132/282 (46%), Gaps = 17/282 (6%)
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
MLR + P+ ++F L+ CS D G +H + L+++ FV ++ +Y K
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND-HGVRPDDFTFASIL 310
+ +A F + +DL++WN +A +H Y ++ M H +RP+ T ++L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 311 AACAGLASVQHGKQIHAHLIRM----------RLNQDVGVGNALVNMYAKCGLISCSYKL 360
A ++ G +HA+ IR +L V +G AL++MYAKCG + + ++
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG---IKPDSVTFIGLLTACNHA 417
F+ M RN V+W+ +I A LF+ M A G + P S+ L AC
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASL 238
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
++ GE + K+ G+ D+ L+ + +AG + +A
Sbjct: 239 DHLRMGEQLHALLAKS-GVHADLTAGNSLLSMYAKAGLIDQA 279
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 109/229 (47%), Gaps = 21/229 (9%)
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
H V P+++TF L AC+ LA G+ IH H I L D+ V AL++MY KC +
Sbjct: 4 HRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPD 63
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALK--LFEQMKATGIKPDSVTFIGLLTAC 414
+ +F M R++V+WN ++A +A+H + A+ L QM+ ++P++ T + LL
Sbjct: 64 AAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLL 123
Query: 415 NHAGLVKEG---EAYF---------NSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
G + +G AY NS K ++ + T L+D+ + G LL A
Sbjct: 124 AQQGALAQGTSVHAYCIRACLHPNRNSKSK---LTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 463 TKKFPLGQD----PIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTS 507
P + ++ G +L + + ++ LA+ L L PT+ +
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA 229
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++ SL+ CS ALQ G H +V+ G+ + + N ++++YAKCG++ L+R+VF+
Sbjct: 326 AATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFN 385
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVK 118
M R++VSW+ MI+G+ G A F +M+ L P+ F +SAC+ +++
Sbjct: 386 MMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIE 445
Query: 119 GQQ 121
G+
Sbjct: 446 GKH 448
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 190/561 (33%), Positives = 330/561 (58%), Gaps = 9/561 (1%)
Query: 22 ISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQA 81
+ +H V+K+G + +++V N +++ Y K + LA ++F M ++ V+++++++G+
Sbjct: 160 VQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNE 219
Query: 82 GEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVG 138
G + A+E F ++H + P+++ FA+ +SA G+ GQQ+H + LK + FVG
Sbjct: 220 GLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVG 279
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL 198
N+L+ Y K + ++ E E + +S+N +I + N Q ++ F++F+ +
Sbjct: 280 NALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFD 339
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHC--LTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
+F FA L I + S +LR G +HC +TV ES V N ++ +Y+K N EA+
Sbjct: 340 RRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESR--VENALVDMYAKCNGDKEAQ 397
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
K F I K + W I+A +E+G++VF +M GV D TFASIL ACA L
Sbjct: 398 KIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRT-GVPADQATFASILRACANL 456
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
AS+ G+Q+H+ LIR +V G+AL++ YAKCG ++ + K F EM RN VSWN +I
Sbjct: 457 ASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALI 516
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
+A+A + L F+QM +G KPDSV+F+ +L+AC+H G V+E +FNSM + Y +
Sbjct: 517 SAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEV 576
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAK 496
+P EH+T ++D+L R G+ EAE+ + P I+ ++L++CR+ ++ + ++ A
Sbjct: 577 TPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAAD 636
Query: 497 QLFHLQP-TTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKF 555
+LF+++ +PY+ +SN+YA G W +VA +K ++D G++K P+YS +E++ F
Sbjct: 637 RLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVF 696
Query: 556 TVAEFSHSKIGEINYMLKTLS 576
+ + SH ++ +I + LS
Sbjct: 697 SANDKSHPEMKKILRKINALS 717
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/468 (26%), Positives = 224/468 (47%), Gaps = 7/468 (1%)
Query: 18 LQQGISLHA-AVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMIS 76
L++G +HA V + I N +++ + K GK+ AR++FD M ER VSW+ +I
Sbjct: 54 LERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIG 113
Query: 77 GHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYAS 133
G+ Q+ + A ++ M + P+ + +S +++ QIH + +K GY
Sbjct: 114 GYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEY 173
Query: 134 ISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLML 193
V NSL+ Y K A ++ + V+FN+L+ G+ E+ E+F +
Sbjct: 174 NLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELH 233
Query: 194 RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
G+ P F+FA L +D + G +H +K N FVGN ++ YSK + +
Sbjct: 234 NSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVD 293
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
E K F + E D IS+N I + + +++ +F+++ R F FA++L+
Sbjct: 294 EVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDR-RQFPFATLLSIA 352
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
+++ G+QIH I + N + V NALV+MYAKC + K+F+ + ++ V W
Sbjct: 353 TSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWT 412
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT 433
+I+A+ + +F M+ TG+ D TF +L AC + + G +S+
Sbjct: 413 AMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQ-LHSLLIR 471
Query: 434 YGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
G ++ + L+D + G + +A + + P ++ + L+SA
Sbjct: 472 SGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMP-ERNSVSWNALISA 518
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 118/210 (56%), Gaps = 3/210 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
++LL + + L+ G +H + +G + V N ++++YAKC A+K+FD ++
Sbjct: 346 ATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIAC 405
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
++ V W+AMIS + Q G+H + FS M + ++ FAS + ACA + S+ G+Q+
Sbjct: 406 KSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQL 465
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H+ ++ G+ S + G++L+ Y K G +DA+ +GE E N VS+NALI+ + +N
Sbjct: 466 HSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNV 525
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
+ F+ M++ G PD SF L CS
Sbjct: 526 DGTLNSFQQMIQSGYKPDSVSFLSVLSACS 555
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 154/335 (45%), Gaps = 44/335 (13%)
Query: 115 SLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNA--- 171
SL I A+ +K G+ + N ++ +++ G A V+ + N +S N
Sbjct: 23 SLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMIS 82
Query: 172 ----------------------------LIAGFVENQQPEKGFEVFKLMLRQGLLPDRFS 203
LI G++++ Q ++ F ++ M R G+ PD +
Sbjct: 83 GHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVT 142
Query: 204 FA------GGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
G LE +V + +H +K E N V N+++ Y K + + A +
Sbjct: 143 LVTLLSGFGELETKNVI------VQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQ 196
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F+ + KD +++N+ + S+ E+ + +F E+ N G++P DFTFA++L+A GL
Sbjct: 197 LFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNS-GIKPSDFTFAALLSAAVGLD 255
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
+ G+Q+H +++ +V VGNAL++ Y+K + KLF EM + +S+N +I
Sbjct: 256 DTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVIT 315
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
++A + + LF +++ T F LL+
Sbjct: 316 SYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLS 350
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 107/202 (52%), Gaps = 2/202 (0%)
Query: 213 VSNDLRKGMILHCLTVKCKLES-NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
V+N L +G ++H V ++ + N N +++ + KF + +A + F + E+ +SW
Sbjct: 50 VNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWT 109
Query: 272 TFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
I ++ ++ +M G+ PD T ++L+ L + QIH H+I+
Sbjct: 110 ILIGGYLQSNQSKEAFRLYADMRRG-GIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIK 168
Query: 332 MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
+ ++ V N+LV+ Y K + + +LF ML+++ V++N+++ ++N L A++L
Sbjct: 169 LGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIEL 228
Query: 392 FEQMKATGIKPDSVTFIGLLTA 413
F ++ +GIKP TF LL+A
Sbjct: 229 FLELHNSGIKPSDFTFAALLSA 250
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L C+ ++ G LH+ +++ G +V + +L+ YAKCG M A K F EM
Sbjct: 445 TFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEM 504
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
ERN VSW+A+IS + Q G L F QM P+ F S +SAC+
Sbjct: 505 PERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACS 555
>gi|302790816|ref|XP_002977175.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
gi|300155151|gb|EFJ21784.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
Length = 806
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 187/524 (35%), Positives = 298/524 (56%), Gaps = 10/524 (1%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L+ GI +H + V+V N ++++Y +CGK+ A +VF +M RN+VSW++MI+
Sbjct: 265 LRGGIQIHDKIQSEIHGTRVLVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAA 324
Query: 78 HHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQS---LVKGQQIHAYSLKFGY 131
Q+G + A++ F M + PNE +AS +SA A + L +G++IH+ G
Sbjct: 325 VAQSGHYSFAVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGI 384
Query: 132 ASISFVGNSLISMYMKVGYSSDALLVYGEAFE--PNLVSFNALIAGFVENQQPEKGFEVF 189
+ V NSLI+MY + G ++A V+ E +VSF +IA + N P + E+F
Sbjct: 385 DADPIVQNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMIAAYAHNGHPRQALEIF 444
Query: 190 KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES-NPFVGNTIMALYSK 248
+ M +G+ P+ +FA L C DL G +H ++ L+S +PF N+++ +Y+K
Sbjct: 445 REMTARGVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAK 504
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
+G A + F ++ KDL++W T IAA + L ++ M G+ PD T ++
Sbjct: 505 CGDLGFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQS-GIHPDIATLST 563
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
+L ACA L + G++IH +R +L QD NAL MYAKCG + + +L+ +
Sbjct: 564 LLVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSD 623
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
V +W +++AAH+ L AL+L+ +M++ G++P+ VTFI +L +C+ AGLV EG +F+
Sbjct: 624 VATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFH 683
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDV 488
S+ YG P EHF C++D+LGRAGKL +AEE P D I +LLS+C+L D
Sbjct: 684 SITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLSSCKLHTDA 743
Query: 489 VIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKML 532
IG R A+ L L P +TS +V LS +YA+ G D+ ++ L
Sbjct: 744 EIGTRAAECLLELDPESTSQFVALSQIYAAAGRNSDIDEIKREL 787
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 145/477 (30%), Positives = 247/477 (51%), Gaps = 11/477 (2%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C + K L QG S+H V G + + + ++ +YA+CG++ LA FD+ E W
Sbjct: 161 CGRIKDLAQGRSIHYRV-ATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPW 219
Query: 72 SAMISGHHQAGEHLLALEFFSQMHLLP-NEYIFASAISACAGIQSLVKGQQIHAYSLKFG 130
+A++S AG H A+E F QM ++ A A+ ACA L G QIH
Sbjct: 220 NAIMSALAGAGHHRRAIELFFQMEQHQCSDRSCAIALGACAAAGHLRGGIQIHDKIQSEI 279
Query: 131 YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFK 190
+ + V N+LISMY++ G +AL V+ + N+VS+ ++IA ++ ++F
Sbjct: 280 HGTRVLVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQSGHYSFAVKLFD 339
Query: 191 LMLRQGLLPDRFSFAGGLE-ICSVSND--LRKGMILHCLTVKCKLESNPFVGNTIMALYS 247
M+ +G+ P+ ++A + I + D L +G +H ++++P V N+++ +Y+
Sbjct: 340 GMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYA 399
Query: 248 KFNLIGEAEKAFRLIEE--KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFT 305
+ L+ EA + F I E K ++S+ T IAA +H + L +F+EM+ GV P++ T
Sbjct: 400 RSGLLAEAREVFDSILENSKTVVSFTTMIAAYAHNGHPRQALEIFREMTA-RGVAPNEIT 458
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLN-QDVGVGNALVNMYAKCGLISCSYKLFNEM 364
FA++LAAC + + G IH +I L+ D N+LV+MYAKCG + + ++F M
Sbjct: 459 FATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETM 518
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+++V+W TIIAA+ +AL L+++M +GI PD T LL AC + G + GE
Sbjct: 519 KTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGE 578
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
++ + D L + + G L +A ++ G D ++L+A
Sbjct: 579 KIHRQALRS-KLEQDAHFQNALAAMYAKCGSLEKATRLYRRCR-GSDVATWTSMLAA 633
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 139/534 (26%), Positives = 255/534 (47%), Gaps = 46/534 (8%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
++LL C +AL G +HA ++ + + ++ V +YA+C A +FD M +
Sbjct: 54 ANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMPD 113
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQI 122
R W+ ++ A LE + +M + P+ F AI AC I+ L +G+ I
Sbjct: 114 RRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRSI 173
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H Y + G S + ++L++MY + G A+ + + E +NA+++
Sbjct: 174 H-YRVATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHH 232
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
+ E+F + Q DR S A L C+ + LR G+ +H + V N +
Sbjct: 233 RRAIELF-FQMEQHQCSDR-SCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLVLNAL 290
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+++Y + + EA + F + ++++SW + IAA + Y + +F M + G+ P+
Sbjct: 291 ISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQSGHYSFAVKLFDGMIAE-GINPN 349
Query: 303 DFTFASILAACAGL---ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+ T+AS+++A A L A + G++IH+ + ++ D V N+L+NMYA+ GL++ + +
Sbjct: 350 EKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEARE 409
Query: 360 LFNEMLH--RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+F+ +L + VVS+ T+IAA+A++ AL++F +M A G+ P+ +TF +L AC
Sbjct: 410 VFDSILENSKTVVSFTTMIAAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAI 469
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL------LGRAGKLLEA------------ 459
G + G M ++ S D + L+D+ LG A ++ E
Sbjct: 470 GDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTI 529
Query: 460 --------------EEYTKKFPLGQDPIV--LGTLLSACRLRRDVVIGERLAKQ 497
+ Y + G P + L TLL AC D+ +GE++ +Q
Sbjct: 530 IAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQ 583
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 168/363 (46%), Gaps = 8/363 (2%)
Query: 102 IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA 161
++A+ + C ++L G+++HA+ + A + +G + MY + A+ ++
Sbjct: 52 LYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAM 111
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
+ +N L+ F+ +P E+++ M + P F + C DL +G
Sbjct: 112 PDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGR 171
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
+H V N + + ++ +Y++ I A AF E WN ++A +
Sbjct: 172 SIH-YRVATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAG 230
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
+ + + +F +M D + A L ACA ++ G QIH + V V
Sbjct: 231 HHRRAIELFFQMEQHQC---SDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLVL 287
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
NAL++MY +CG + + ++F +M HRNVVSW ++IAA A A+KLF+ M A GI
Sbjct: 288 NALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQSGHYSFAVKLFDGMIAEGIN 347
Query: 402 PDSVTFIGLLTACNHAG---LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLE 458
P+ T+ +++A H G ++ G + + + GI D LI++ R+G L E
Sbjct: 348 PNEKTYASVVSAIAHLGRDAILDRGRKIHSQITAS-GIDADPIVQNSLINMYARSGLLAE 406
Query: 459 AEE 461
A E
Sbjct: 407 ARE 409
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 5/186 (2%)
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
+A++L C ++ HG+++HAH++ RL ++ +G + MYA+C + LF+ M
Sbjct: 53 YANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMP 112
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
R WN ++ L+L+ +M +P + F+ + AC + +G +
Sbjct: 113 DRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRS 172
Query: 426 YFNSMEKTYGISPDIEHFTCLIDLLGRAGKL-LEAEEYTKKFPLGQDP--IVLGTLLSAC 482
+ GI+ I+ + L+ + + G++ L + LG P ++ L A
Sbjct: 173 IHYRVATGRGINSSIQ--SALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAG 230
Query: 483 RLRRDV 488
RR +
Sbjct: 231 HHRRAI 236
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 208/575 (36%), Positives = 322/575 (56%), Gaps = 6/575 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S +++ C+ ++ L+ G +HA V++ G DV +N ++++Y+K G + +A VF ++ +
Sbjct: 206 SCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPK 265
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG--Q 120
++VSW+A ISG G ALE QM L+PN + +S + ACAG + +
Sbjct: 266 TDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGR 325
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH + +K S ++G +L+ MY K G DA V+ +L+ +NALI+G
Sbjct: 326 QIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGG 385
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ +F M ++G +R + A L+ + + +H L K S+ V N
Sbjct: 386 CHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVN 445
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ Y K N + A K F ++I++ + I A S C E + +F EM G+
Sbjct: 446 GLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRK-GLE 504
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD F +S+L ACA L++ + GKQ+HAHLI+ + DV GNALV YAKCG I +
Sbjct: 505 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLA 564
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+ + + VVSW+ +I A H G AL +F +M I P+ +T +L ACNHAGLV
Sbjct: 565 FSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLV 624
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
E + YF+SM++ +GI EH++C+IDLLGRAGKL +A E P + V G LL+
Sbjct: 625 DEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLA 684
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
A R+ RD +G+ A++LF L+P + +VLL+N YAS GMW +VA RK++KDS +KKE
Sbjct: 685 ASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKE 744
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P+ S +E++ F V + SH + +I L+ L
Sbjct: 745 PAMSWVELKDRVHTFIVGDKSHPRARDIYAKLEEL 779
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 222/410 (54%), Gaps = 7/410 (1%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS-ERNLVSWSAMISGHH 79
G+ +HA + G+ D+ V+N ++ +Y G + AR+VFDE + +RN VSW+ M+S
Sbjct: 119 GVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFV 178
Query: 80 QAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF 136
+ A+E F +M + PNE+ F+ ++AC G + L G+++HA ++ GY F
Sbjct: 179 KNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVF 238
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
N+L+ MY K+G A LV+G+ + ++VS+NA I+G V + + E+ M G
Sbjct: 239 TANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSG 298
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMI--LHCLTVKCKLESNPFVGNTIMALYSKFNLIGE 254
L+P+ F+ + L+ C+ + + +H +K +S+ ++G ++ +Y+K+ L+ +
Sbjct: 299 LVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDD 358
Query: 255 AEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA 314
A K F I KDL+ WN I+ CSH + + LS+F M + G + T A++L + A
Sbjct: 359 ARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKE-GSDINRTTLAAVLKSTA 417
Query: 315 GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNT 374
L ++ Q+HA ++ D V N L++ Y KC + + K+F E N++++ +
Sbjct: 418 SLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTS 477
Query: 375 IIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+I A + G A+KLF +M G++PD LL AC ++G+
Sbjct: 478 MITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGK 527
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 131/417 (31%), Positives = 220/417 (52%), Gaps = 12/417 (2%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+SIS LL + T++L G +HA +LK G+ NH+L+ Y+KC AR+VFDE
Sbjct: 5 ESISPLLTRYAATQSLFLGAHIHAHLLKSGLLH--AFRNHLLSFYSKCRLPGSARRVFDE 62
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
+ VSWS++++ + AL F M + NE+ + CA L G
Sbjct: 63 TPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLK-CAPDAGL--G 119
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF-EPNLVSFNALIAGFVE 178
Q+HA ++ G + FV N+L++MY G+ +A V+ EA + N VS+N +++ FV+
Sbjct: 120 VQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVK 179
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N + E+F M+ G+ P+ F F+ + C+ S DL G +H + V+ + + F
Sbjct: 180 NDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFT 239
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N ++ +YSK I A F + + D++SWN FI+ C + L + +M + G
Sbjct: 240 ANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSS-G 298
Query: 299 VRPDDFTFASIL--AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
+ P+ FT +SIL A AG + G+QIH +I+ + D +G ALV+MYAK GL+
Sbjct: 299 LVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDD 358
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ K+F + ++++ WN +I+ ++ G +L LF +M+ G + T +L +
Sbjct: 359 ARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKS 415
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 117/212 (55%), Gaps = 3/212 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++++L + +A+ +HA K+G D V N +++ Y KC + A KVF+E
Sbjct: 408 TLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEH 467
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
S N++++++MI+ Q A++ F +M L P+ ++ +S ++ACA + + +G+
Sbjct: 468 SSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGK 527
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HA+ +K + + F GN+L+ Y K G DA L + + +VS++A+I G ++
Sbjct: 528 QVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHG 587
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
++ +VF+ M+ + + P+ + L C+
Sbjct: 588 HGKRALDVFRRMVDERIAPNHITLTSVLCACN 619
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 93/189 (49%), Gaps = 11/189 (5%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+SSLL+ C+ A +QG +HA ++K DV N ++ YAKCG + A F +
Sbjct: 510 LSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLP 569
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISAC--AGIQSLVKG 119
++ +VSWSAMI G Q G AL+ F +M + PN S + AC AG+ KG
Sbjct: 570 DKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKG 629
Query: 120 QQIHAYSLK--FGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIAGF 176
+ S+K FG + +I + + G DA+ LV FE N + AL+A
Sbjct: 630 ---YFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAAS 686
Query: 177 VENQQPEKG 185
++ PE G
Sbjct: 687 RVHRDPELG 695
>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
Length = 1029
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 195/576 (33%), Positives = 325/576 (56%), Gaps = 7/576 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C +L G +H +K + D+ V+N +L++Y+K G + +A+ +F + +
Sbjct: 433 SVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGK 492
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
+ VSW+A+I G E A+ +M + P+E FA+AI+AC+ I++ G+QIH
Sbjct: 493 DSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIH 552
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
S+K+ S VG+SLI +Y K G + V ++V NALI G V+N + +
Sbjct: 553 CASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNRED 612
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL-ESNPFVGNTI 242
+ E+F+ +L+ G P F+FA L C+ G +H T+K L + +G ++
Sbjct: 613 EAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISL 672
Query: 243 MALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+ +Y K L+ +A K + + K+L+ W I+ + ++ L +F M + H VR
Sbjct: 673 VGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRS-HDVRS 731
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D+ TFAS+L AC+ +A++ GK+IH +I+ +AL++MY+KCG + S+++F
Sbjct: 732 DEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIF 791
Query: 362 NEMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
E+ ++ N++ WN++I A + AL LF++M+ + +KPD VT +G+L AC+HAGL+
Sbjct: 792 KELKNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIACSHAGLI 851
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG F+SM + YGI P ++H+ CLIDLLGR G L EA+E + P D ++ T L+
Sbjct: 852 SEGRNLFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPFRADGVIWATFLA 911
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC++ +D G+ AK+L ++P +S YV LS+L+A+ G W + AR+ +++ G+ K
Sbjct: 912 ACQMHKDEERGKVAAKKLVEMEPQRSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKF 971
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
P S I V F V + H I ML L+
Sbjct: 972 PGCSWITVGNKTNLFVVQDTHHPDTLGIYKMLDDLT 1007
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 140/481 (29%), Positives = 256/481 (53%), Gaps = 7/481 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L + A +G +HAA +K G+ +V V + ++NLY K G + A+KVFD
Sbjct: 329 TFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFS 388
Query: 64 SERNLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
+E+N+V W+AM+ G Q E + ++ + L +++ F S + AC + SL G+
Sbjct: 389 TEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGR 448
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H ++K + FV N+++ MY K+G A ++ + VS+NALI G N+
Sbjct: 449 QVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNE 508
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ E+ + K M G+ PD SFA + CS G +HC ++K + SN VG+
Sbjct: 509 EEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGS 568
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ LYSKF + + K ++ ++ N I ++ + +F+++ D G +
Sbjct: 569 SLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKD-GFK 627
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCSYK 359
P +FTFASIL+ C G S GKQ+H++ ++ LNQD +G +LV +Y KC L+ + K
Sbjct: 628 PSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANK 687
Query: 360 LFNEML-HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
L E+ H+N+V W I+ +A + +L +F +M++ ++ D TF +L AC+
Sbjct: 688 LLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIA 747
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
+ +G+ + K+ +S + + L+D+ + G ++ + E K+ Q+ + ++
Sbjct: 748 ALTDGKEIHGLIIKSGFVSYETAA-SALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSM 806
Query: 479 L 479
+
Sbjct: 807 I 807
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 130/400 (32%), Positives = 224/400 (56%), Gaps = 4/400 (1%)
Query: 19 QQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGH 78
QQ ++L + + KMG PD + +++ A G++ AR + + + V+W+A+IS +
Sbjct: 243 QQALALFSRMEKMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQMPSTVAWNAVISSY 302
Query: 79 HQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS 135
Q+G + M L+P FAS +SA A + + +GQQIHA ++K G +
Sbjct: 303 SQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANV 362
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
FVG+SLI++Y+K G SDA V+ + E N+V +NA++ GFV+N E+ ++F+ M R
Sbjct: 363 FVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRA 422
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
L D F+F L C + L G +HC+T+K ++++ FV N ++ +YSK I A
Sbjct: 423 DLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVA 482
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
+ F LI KD +SWN I +H + E+ + + K M +G+ PD+ +FA+ + AC+
Sbjct: 483 KALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKC-YGIAPDEVSFATAINACSN 541
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
+ + + GKQIH I+ + + VG++L+++Y+K G + S K+ + ++V N +
Sbjct: 542 IRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINAL 601
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
I + A++LF+Q+ G KP + TF +L+ C
Sbjct: 602 ITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCT 641
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 229/452 (50%), Gaps = 34/452 (7%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
++ +L CS+ AL+QG +H VLK G ++++YAKC ++ AR+VFD ++
Sbjct: 163 LAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIA 222
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHA 124
+ + W++MI+G+H+ G + AL FS+M
Sbjct: 223 CPDTICWASMIAGYHRVGRYQQALALFSRME----------------------------- 253
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
K G A ++IS +G SDA + P+ V++NA+I+ + ++ +
Sbjct: 254 ---KMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESE 310
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
F ++K M RQGL+P R +FA L + +G +H VK L++N FVG++++
Sbjct: 311 VFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLIN 370
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
LY K I +A+K F EK+++ WN + E+ + +F+ M + DDF
Sbjct: 371 LYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRR-ADLEADDF 429
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
TF S+L AC L S+ G+Q+H I+ ++ D+ V NA+++MY+K G I + LF+ +
Sbjct: 430 TFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLI 489
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
++ VSWN +I A++ A+ + ++MK GI PD V+F + AC++ + G+
Sbjct: 490 PGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGK 549
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+ K Y + + + LIDL + G +
Sbjct: 550 QIHCASIK-YNVCSNHAVGSSLIDLYSKFGDV 580
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 193/397 (48%), Gaps = 42/397 (10%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD--EMSERNLVSWSAMISGHHQA 81
LHA VL++G+ + + +++LY + G++ A + + + + S+++S H ++
Sbjct: 78 LHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHARS 137
Query: 82 GEHLLALEFFSQMHL----LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
G L+ F ++ P+++ A +SAC+ + +L +G+Q+H LK G+ S +F
Sbjct: 138 GSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFC 197
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
L+ MY K DA V+ P+ + + ++IAG+ + ++ +F M + G
Sbjct: 198 QAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGS 257
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
PD+ ++ TI++ + + +A
Sbjct: 258 APDQVTYV-----------------------------------TIISTLASMGRLSDART 282
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
+ I+ ++WN I++ S + ++K+M G+ P TFAS+L+A A +
Sbjct: 283 LLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKR-QGLMPTRSTFASMLSAAASMT 341
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
+ G+QIHA ++ L+ +V VG++L+N+Y K G IS + K+F+ +N+V WN ++
Sbjct: 342 AFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLY 401
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ L +++F+ M+ ++ D TF+ +L AC
Sbjct: 402 GFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGAC 438
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 96/214 (44%), Gaps = 6/214 (2%)
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHC- 280
+LH ++ L +G+ ++ LY + +G A +A H
Sbjct: 77 VLHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHAR 136
Query: 281 -ADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG 339
L F+ + G PD F A +L+AC+ L +++ G+Q+H +++
Sbjct: 137 SGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAF 196
Query: 340 VGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG--GSALKLFEQMKA 397
LV+MYAKC + + ++F+ + + + W ++IA + HR+G AL LF +M+
Sbjct: 197 CQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGY--HRVGRYQQALALFSRMEK 254
Query: 398 TGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
G PD VT++ +++ G + + ++
Sbjct: 255 MGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQ 288
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 68/123 (55%), Gaps = 4/123 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L CS+ AL G +H ++K G ++ ++++Y+KCG +I + ++F E+
Sbjct: 735 TFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKEL 794
Query: 64 -SERNLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKG 119
+++N++ W++MI G + G E LL + + L P+E + AC+ + +G
Sbjct: 795 KNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIACSHAGLISEG 854
Query: 120 QQI 122
+ +
Sbjct: 855 RNL 857
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 204/586 (34%), Positives = 312/586 (53%), Gaps = 28/586 (4%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L+ G LH L++G Q +N ++ +YAK G++ ++ +F+ +R++VSW+ MIS
Sbjct: 213 LRLGKQLHGYSLRVGDQ-KTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISS 271
Query: 78 HHQAGEHLLALEFFSQMHLLPNE---YIFASAISACAGIQSLVKGQQIHAYSLKFG-YAS 133
Q+ AL FF M L E AS + AC+ ++ L G++IHAY L+
Sbjct: 272 FSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIE 331
Query: 134 ISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLML 193
SFVG++L+ MY V+ + +NA+I+G+ N EK +F M+
Sbjct: 332 NSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMI 391
Query: 194 R-QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI 252
+ GLLP+ + A + C +H VK + + +V N +M +YS+ +
Sbjct: 392 KVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKM 451
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV------------- 299
+E F +E +D +SWNT I Y L + EM
Sbjct: 452 DISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKG 511
Query: 300 ---RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
+P+ T ++L CA LA++ GK+IHA+ IR L D+ VG+ALV+MYAKCG ++
Sbjct: 512 GPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNL 571
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG-----IKPDSVTFIGLL 411
S ++FNEM ++NV++WN +I A H G AL+LF+ M A KP+ VTFI +
Sbjct: 572 SRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVF 631
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQD 471
AC+H+GL+ EG F M+ +G+ P +H+ C++DLLGRAG+L EA E P D
Sbjct: 632 AACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFD 691
Query: 472 PI-VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARK 530
+ +LL ACR+ ++V +GE AK L HL+P S YVLLSN+Y+S G+W RK
Sbjct: 692 KVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRK 751
Query: 531 MLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
++ G+KKEP S IE + KF + SH + +++ L+TLS
Sbjct: 752 NMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLS 797
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 207/400 (51%), Gaps = 12/400 (3%)
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQI 122
R+ SW + ++ + A+ + +M + P+ + F + + A +G+Q L G+QI
Sbjct: 55 RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114
Query: 123 HAYSLKFGYASISF-VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
HA ++KFGY S S V N+L++MY K G D V+ + + VS+N+ IA ++
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEK 174
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICS---VSNDLRKGMILHCLTVKCKLESNPFV 238
E+ E F+ M + + F+ CS V + LR G LH +++ + F
Sbjct: 175 WEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFT 233
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N +MA+Y+K + +++ F ++D++SWNT I++ S + + L+ F+ M + G
Sbjct: 234 NNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLE-G 292
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCS 357
V D T AS+L AC+ L + GK+IHA+++R L ++ VG+ALV+MY C +
Sbjct: 293 VELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESG 352
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF-EQMKATGIKPDSVTFIGLLTACNH 416
++F+ +L R + WN +I+ +A + L AL LF E +K G+ P++ T ++ AC H
Sbjct: 353 RRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVH 412
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
E+ K G D L+D+ R GK+
Sbjct: 413 CEAFSNKESIHGYAVK-LGFKEDRYVQNALMDMYSRMGKM 451
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 135/505 (26%), Positives = 245/505 (48%), Gaps = 30/505 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGI-QPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+ ++L S + L+ G +HAA +K G V V+N ++N+Y KCG + KVFD
Sbjct: 94 AFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDR 153
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNE---YIFASAISACAGI---QSL 116
+++R+ VSW++ I+ + + ALE F M + E + S AC+ + L
Sbjct: 154 ITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGL 213
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G+Q+H YSL+ G +F N+L++MY K+G D+ ++ + ++VS+N +I+ F
Sbjct: 214 RLGKQLHGYSLRVGDQK-TFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSF 272
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK-LESN 235
++ + + F+LM+ +G+ D + A L CS L G +H ++ L N
Sbjct: 273 SQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIEN 332
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
FVG+ ++ +Y + + F I + + WN I+ + EK L +F EM
Sbjct: 333 SFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIK 392
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
G+ P+ T AS++ AC + + + IH + +++ +D V NAL++MY++ G +
Sbjct: 393 VAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMD 452
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK-----------------AT 398
S +F+ M R+ VSWNT+I + +AL L +M+
Sbjct: 453 ISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGG 512
Query: 399 GIKPDSVTFIGLLTACNH-AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLL 457
KP+++T + +L C A + K E + ++ ++ DI + L+D+ + G L
Sbjct: 513 PYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNM--LASDITVGSALVDMYAKCGCLN 570
Query: 458 EAEEYTKKFPLGQDPIVLGTLLSAC 482
+ + P ++ I L+ AC
Sbjct: 571 LSRRVFNEMP-NKNVITWNVLIMAC 594
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 197/424 (46%), Gaps = 42/424 (9%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+I+S+L CS + L G +HA VL+ + + V + ++++Y C ++ R+VFD
Sbjct: 299 TIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDH 358
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVK 118
+ R + W+AMISG+ + G AL F +M LLPN AS + AC ++
Sbjct: 359 ILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSN 418
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+ IH Y++K G+ +V N+L+ MY ++G + ++ + VS+N +I G+V
Sbjct: 419 KESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVL 478
Query: 179 NQQPEKGFEVFKLMLRQ-----------------GLLPDRFSFAGGLEICSVSNDLRKGM 221
+ + + M R P+ + L C+ + KG
Sbjct: 479 SGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGK 538
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
+H ++ L S+ VG+ ++ +Y+K + + + F + K++I+WN I AC
Sbjct: 539 EIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHG 598
Query: 282 DYEKGLSVFKEMSNDHG----VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD 337
E+ L +FK M + G +P++ TF ++ AAC+ + G + R+ D
Sbjct: 599 KGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLF-----YRMKHD 653
Query: 338 VGVGNA------LVNMYAKCGLISCSYKLFNEMLHR--NVVSWNTIIAA---HANHRLGG 386
GV +V++ + G + +Y+L N M V +W++++ A H N LG
Sbjct: 654 HGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGE 713
Query: 387 SALK 390
A K
Sbjct: 714 VAAK 717
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 198/438 (45%), Gaps = 67/438 (15%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++S++ C +A S+H +K+G + D V N ++++Y++ GKM ++ +FD M
Sbjct: 402 TMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSM 461
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL--------------------PNEYIF 103
R+ VSW+ MI+G+ +G + AL +M + PN
Sbjct: 462 EVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITL 521
Query: 104 ASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE 163
+ + CA + ++ KG++IHAY+++ AS VG++L+ MY K G + + V+ E
Sbjct: 522 MTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPN 581
Query: 164 PNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG-----LLPDRFSFAGGLEICSVSNDLR 218
N++++N LI + + E+ E+FK M+ + P+ +F CS S
Sbjct: 582 KNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHS---- 637
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA---EKAFRLIE----EKDLI-SW 270
G+I L + +++ + V T +L+G A E+A+ L+ E D + +W
Sbjct: 638 -GLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAW 696
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
++ + AC + E G K + + + S + + AGL + ++ ++
Sbjct: 697 SSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWN--KAMEVRKNMR 754
Query: 331 RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH----RLGG 386
+M + ++ G CS+ F + +H+ +A +H +L G
Sbjct: 755 QMGVKKEPG----------------CSWIEFRDEVHK-------FMAGDVSHPQSEQLHG 791
Query: 387 SALKLFEQMKATGIKPDS 404
L E+M+ G PD+
Sbjct: 792 FLETLSEKMRKEGYVPDT 809
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 68/120 (56%), Gaps = 12/120 (10%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++ ++L C+ A+ +G +HA ++ + D+ V + ++++YAKCG + L+R+VF+
Sbjct: 518 AITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFN 577
Query: 62 EMSERNLVSWSAMI--SGHHQAGEHLLALEFFSQM--------HLLPNEYIFASAISACA 111
EM +N+++W+ +I G H GE ALE F M PNE F + +AC+
Sbjct: 578 EMPNKNVITWNVLIMACGMHGKGEE--ALELFKNMVAEAGRGGEAKPNEVTFITVFAACS 635
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 195/575 (33%), Positives = 311/575 (54%), Gaps = 6/575 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++ S+L C + + G +H LK G DV V+ +++LY + G ++ AR +FDE
Sbjct: 154 RTFPSVLKAC---RNVTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDE 210
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQI 122
M R++ SW+AMISG+ Q+G AL + + + S +SAC +G I
Sbjct: 211 MPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAM-DSVTVVSLLSACTEAGDFNRGVTI 269
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H+YS+K G S FV N LI +Y + G D V+ + +L+S+N++I + N+QP
Sbjct: 270 HSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQP 329
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV-KCKLESNPFVGNT 241
+ +F+ M + PD + I S ++R + T+ K + +GN
Sbjct: 330 LRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNA 389
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG-VR 300
++ +Y+K L+ A F + KD+ISWNT I+ + + + ++ M + G +
Sbjct: 390 VVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEIS 449
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ T+ S+L AC+ +++ G ++H L++ L DV VG +L +MY KCG + + L
Sbjct: 450 ANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSL 509
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F ++ N V WNT+IA H H G A+ LF++M G+KPD +TF+ LL+AC+H+GLV
Sbjct: 510 FYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLV 569
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EGE F M+ YGI+P ++H+ C++DL GRAG+L A + K PL D + G LLS
Sbjct: 570 DEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLS 629
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ +V +G+ ++ LF ++P +VLLSN+YAS G W V R + GL+K
Sbjct: 630 ACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKT 689
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P +S +EV E F +H E+ L L
Sbjct: 690 PGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTAL 724
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 136/472 (28%), Positives = 248/472 (52%), Gaps = 21/472 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +L +C+ LQ LHA ++ +V +S ++NLY G + LAR FD +
Sbjct: 56 DVHTLFRYCTN---LQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHI 112
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFS----QMHLLPNEYIFASAISACAGIQSLVKG 119
R++ +W+ MISG+ +AG + FS L P+ F S + AC +++ G
Sbjct: 113 HNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKAC---RNVTDG 169
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+IH +LKFG+ +V SLI +Y + G +A +++ E ++ S+NA+I+G+ ++
Sbjct: 170 NKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQS 229
Query: 180 QQPEKGFEVFKLMLRQGLLP-DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
++ L L GL D + L C+ + D +G+ +H ++K LES FV
Sbjct: 230 GNAKEA-----LTLSDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFV 284
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N ++ LY++F + + +K F + +DLISWN+ I A + + +F+EM
Sbjct: 285 SNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSR- 343
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKCGLISCS 357
++PD T S+ + + L ++ + + +R +D+ +GNA+V MYAK GL+ +
Sbjct: 344 IQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSA 403
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG--IKPDSVTFIGLLTACN 415
+FN + +++V+SWNTII+ +A + A++++ M+ G I + T++ +L AC+
Sbjct: 404 RAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACS 463
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
AG +++G + K G+ D+ T L D+ G+ G+L +A + P
Sbjct: 464 QAGALRQGMKLHGRLLKN-GLYLDVFVGTSLADMYGKCGRLDDALSLFYQIP 514
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 199/582 (34%), Positives = 320/582 (54%), Gaps = 15/582 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMI-----LARK 58
S S L C K L+Q +HA+++K PD ++ L A C + + A
Sbjct: 24 SFLSTLQTCKSIKGLKQ---IHASIIKTMPSPDAQLTIST-RLSALCAQSLPIDPRYALS 79
Query: 59 VFDEMSERNLVSWSAMISGHHQAG-EHLLALEFFSQM---HLLPNEYIFASAISACAGIQ 114
+ ++ NL ++A+I G + + + L + QM ++P+ Y + ACA +
Sbjct: 80 LLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESR 139
Query: 115 SLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIA 174
++ +G+++H ++K G AS +V N+L+ MY A V+ + + +LVS+ +I
Sbjct: 140 AVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQ 199
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK-CKLE 233
G+V+ +G +F M + L D + L C+ DLR G LH ++ +
Sbjct: 200 GYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVN 259
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
+ FVGN ++ +Y K A K F+ + K+++SWN+ I+ + +++ L +F++M
Sbjct: 260 LDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKM 319
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
GV+PDD T ++L +CA L ++ GK +HA+L R ++ D +GNALV+MYAKCG
Sbjct: 320 QR-LGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGS 378
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
I + +F M ++V S+ +I A H GG AL LF +M GI+PD VTF+G+LTA
Sbjct: 379 IDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTA 438
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C+H GLV+EG YF M Y + P +EH+ C++DLLGRAG + EAEE+ + P+ D
Sbjct: 439 CSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAF 498
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
VLG LL AC++ V +GE + K++ ++P YVL+SN+Y+S W D RK +K
Sbjct: 499 VLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMK 558
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ L+K P S IE+ G +F + SH KI EI +L +
Sbjct: 559 ERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEI 600
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 210/585 (35%), Positives = 322/585 (55%), Gaps = 30/585 (5%)
Query: 3 KSISSLL-HHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
K+ S+L HHC G ++H + G+Q D+ VS +L++Y KC + A +F
Sbjct: 18 KACSALADHHC--------GRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFA 69
Query: 62 EMSERNLVSWSAMISG------HHQAGEHLLALEFFSQMH-LLPNEYIFASAISACAGIQ 114
M R+LV+W+AM++G +H A HLL+++ QMH L PN + + A
Sbjct: 70 TMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQM--QMHRLRPNASTLVALLPLLAQQG 127
Query: 115 SLVKGQQIHAYSL----------KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEP 164
+L +G +HAY + K +G +L+ MY K G A V+
Sbjct: 128 ALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR 187
Query: 165 NLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL-LPDRFSFAGGLEICSVSNDLRKGMIL 223
N V+++ALI GFV + + F +FK ML QGL S A L C+ + LR G L
Sbjct: 188 NEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQL 247
Query: 224 HCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY 283
H L K + ++ GN+++++Y+K LI +A F + KD +S++ ++
Sbjct: 248 HALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRA 307
Query: 284 EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA 343
E+ VFK+M + V PD T S++ AC+ LA++QHG+ H +I L + + NA
Sbjct: 308 EEAFLVFKKMQACN-VEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNA 366
Query: 344 LVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPD 403
L++MYAKCG I S ++FN M R++VSWNT+IA + H LG A LF +M G PD
Sbjct: 367 LIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPD 426
Query: 404 SVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYT 463
VTFI LL+AC+H+GLV EG+ +F+ M YG++P +EH+ C++DLL R G L EA E+
Sbjct: 427 GVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFI 486
Query: 464 KKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWG 523
+ PL D V LL ACR+ +++ +G+++++ + L P T +VLLSN+Y++ G +
Sbjct: 487 QSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFD 546
Query: 524 DVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
+ A R + K G KK P S IE+ G+ F + SH + EI
Sbjct: 547 EAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEI 591
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 190/395 (48%), Gaps = 14/395 (3%)
Query: 98 PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV 157
PN Y F A+ AC+ + G+ IH +++ G + FV +L+ MY+K DA +
Sbjct: 8 PNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHI 67
Query: 158 YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ--GLLPDRFSFAGGLEICSVSN 215
+ +LV++NA++AG+ + M Q L P+ + L + +
Sbjct: 68 FATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQG 127
Query: 216 DLRKGMILHCLTV----------KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK 265
L +G +H + K KL +G ++ +Y+K + A + F + +
Sbjct: 128 ALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR 187
Query: 266 DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
+ ++W+ I C+ + +FK M + AS L ACA L ++ G+Q+
Sbjct: 188 NEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQL 247
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
HA L + ++ D+ GN+L++MYAK GLI + LF+EM ++ VS++ +++ + +
Sbjct: 248 HALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRA 307
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
A +F++M+A ++PD+ T + L+ AC+H ++ G S+ G++ +
Sbjct: 308 EEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSV-IIRGLASETSICNA 366
Query: 446 LIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
LID+ + G++ + + P +D + T+++
Sbjct: 367 LIDMYAKCGRIDLSRQVFNMMP-SRDIVSWNTMIA 400
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 132/280 (47%), Gaps = 13/280 (4%)
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
MLR + P+ ++F L+ CS D G +H + L+++ FV ++ +Y K
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND-HGVRPDDFTFASIL 310
+ +A F + +DL++WN +A +H Y ++ M H +RP+ T ++L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 311 AACAGLASVQHGKQIHAHLIRM----------RLNQDVGVGNALVNMYAKCGLISCSYKL 360
A ++ G +HA+ IR +L V +G AL++MYAKCG + + ++
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG-LLTACNHAGL 419
F+ M RN V+W+ +I A LF+ M A G+ S T I L AC
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
++ GE + K+ G+ D+ L+ + +AG + +A
Sbjct: 241 LRMGEQLHALLAKS-GVHADLTAGNSLLSMYAKAGLIDQA 279
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 109/229 (47%), Gaps = 21/229 (9%)
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
H V P+++TF L AC+ LA G+ IH H I L D+ V AL++MY KC +
Sbjct: 4 HRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPD 63
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALK--LFEQMKATGIKPDSVTFIGLLTAC 414
+ +F M R++V+WN ++A +A+H + A+ L QM+ ++P++ T + LL
Sbjct: 64 AAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLL 123
Query: 415 NHAGLVKEG---EAYF---------NSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
G + +G AY NS K ++ + T L+D+ + G LL A
Sbjct: 124 AQQGALAQGTSVHAYCIRACLHPNRNSKSK---LTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 463 TKKFPLGQD----PIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTS 507
P + ++ G +L + + ++ LA+ L L PT+ +
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA 229
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++ SL+ CS ALQ G H +V+ G+ + + N ++++YAKCG++ L+R+VF+
Sbjct: 326 AATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFN 385
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVK 118
M R++VSW+ MI+G+ G A F +M+ L P+ F +SAC+ +++
Sbjct: 386 MMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIE 445
Query: 119 GQQ 121
G+
Sbjct: 446 GKH 448
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 190/574 (33%), Positives = 313/574 (54%), Gaps = 4/574 (0%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L CS L+ G HA V+K+G D + ++++Y K G M AR+VFD + +R+
Sbjct: 168 VLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRD 227
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
+ +++ MI G+ ++G+ A + F +M PN F S + C+ ++L G+ +HA
Sbjct: 228 VSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHA 287
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ G V +LI MYM G A V+ + ++VS+ +I G+ EN E
Sbjct: 288 QCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIED 347
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
F +F M +G+ PDR ++ + C+ S DL +H V+ ++ V ++
Sbjct: 348 AFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVH 407
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y+K I +A + F + +D++SW+ I A E+ F M ++ V PD
Sbjct: 408 MYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNN-VEPDVV 466
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T+ ++L AC L ++ G +I+ I+ L + VGNAL+NM K G I + +F M
Sbjct: 467 TYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENM 526
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+ R+VV+WN +I ++ H AL LF++M +P+SVTF+G+L+AC+ AG V+EG
Sbjct: 527 VQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGR 586
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRL 484
+F+ + GI P +E + C++DLLGRAG+L EAE + PL + + TLL+ACR+
Sbjct: 587 RFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRI 646
Query: 485 RRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYS 544
++ + ER A++ +P + YV LS++YA+ GMW +VA RK+++ G++KE +
Sbjct: 647 YGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCT 706
Query: 545 MIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSLA 578
IEV+G F V + SH + GEI L L A
Sbjct: 707 WIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTA 740
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/425 (30%), Positives = 223/425 (52%), Gaps = 4/425 (0%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+++ L C + G + +++ G Q ++ N ++ L++ CG M+ AR+ FD
Sbjct: 61 SRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFD 120
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
+ + +V+W+A+I+G+ Q G A F QM + P+ F + AC+ L
Sbjct: 121 SVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKL 180
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G++ HA +K G+ S +G +L+SMY+K G A V+ ++ ++ +FN +I G+ +
Sbjct: 181 GKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAK 240
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ EK F++F M ++G P+R SF L+ CS L G +H + L + V
Sbjct: 241 SGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRV 300
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++ +Y I A + F ++ +D++SW I + ++ E +F M + G
Sbjct: 301 ATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATM-QEEG 359
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
++PD T+ I+ ACA A + ++IH+ ++R D+ V ALV+MYAKCG I +
Sbjct: 360 IQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDAR 419
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
++F+ M R+VVSW+ +I A+ + G A + F MK ++PD VT+I LL AC H G
Sbjct: 420 QVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLG 479
Query: 419 LVKEG 423
+ G
Sbjct: 480 ALDLG 484
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 1/160 (0%)
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D T+ + C L GKQ+ H+I+ ++ N L+ +++ CG + + + F
Sbjct: 60 DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ + ++ VV+WN IIA +A A LF QM ++P +TF+ +L AC+ +K
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLK 179
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
G+ + + K G D T L+ + + G + A +
Sbjct: 180 LGKEFHAQVIKV-GFVSDFRIGTALVSMYVKGGSMDGARQ 218
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 196/564 (34%), Positives = 304/564 (53%), Gaps = 5/564 (0%)
Query: 17 ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMIS 76
L G +H K+G Q +V V+ ++++Y++ G +AR +FD+M R++ SW+AMIS
Sbjct: 230 TLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMIS 289
Query: 77 GHHQAGEHLLALEFFSQMHLLPNEYIFASAIS---ACAGIQSLVKGQQIHAYSLKFGYAS 133
G Q G AL+ +M L + F + +S C + + IH Y +K G
Sbjct: 290 GLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEF 349
Query: 134 ISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLML 193
FV N+LI+MY K G DA + + F ++VS+N++IA + +N P F M
Sbjct: 350 DLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQ 409
Query: 194 RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK-CKLESNPFVGNTIMALYSKFNLI 252
G PD + I + S D + +H ++ L + +GN ++ +Y+K L+
Sbjct: 410 LNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLL 469
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
A K F +I KD+ISWNT I + + + V+K M + P+ T+ SIL A
Sbjct: 470 DSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPA 529
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
A + ++Q G +IH +I+ L+ DV V L+++Y KCG + + LF ++ + V+W
Sbjct: 530 YAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTW 589
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
N II+ H H LKLF +M G+KPD VTF+ LL+AC+H+G V+EG+ F M++
Sbjct: 590 NAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE 649
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGE 492
YGI P ++H+ C++DLLGRAG L A + K PL D + G LL ACR+ ++ +G+
Sbjct: 650 -YGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGK 708
Query: 493 RLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTF 552
+ +LF + YVLLSN+YA+ G W V R + ++ GLKK P +S IEV
Sbjct: 709 FASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKV 768
Query: 553 EKFTVAEFSHSKIGEINYMLKTLS 576
+ F SH K EI L+ L+
Sbjct: 769 DVFYTGNQSHPKCKEIYEELRVLT 792
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 136/450 (30%), Positives = 249/450 (55%), Gaps = 11/450 (2%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
LHA ++ G + +S ++NLYA G + L+R FD++ ++++ +W++MIS + G
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGH 197
Query: 84 HLLALEFFSQMHLL----PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
A+ F Q+ L+ P+ Y F + AC +LV G++IH ++ K G+ FV
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG---TLVDGRRIHCWAFKLGFQWNVFVAA 254
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
SLI MY + G++ A ++ + ++ S+NA+I+G ++N + +V M +G+
Sbjct: 255 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKM 314
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
+ + L +C D+ M++H +K LE + FV N ++ +Y+KF + +A KAF
Sbjct: 315 NFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAF 374
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+ + D++SWN+ IAA D F +M + G +PD T S+ + A
Sbjct: 375 QQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLN-GFQPDLLTLVSLASIVAQSRDC 433
Query: 320 QHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA 378
++ + +H ++R L +DV +GNA+V+MYAK GL+ ++K+F +L ++V+SWNT+I
Sbjct: 434 KNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITG 493
Query: 379 HANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
+A + L A+++++ M + I P+ T++ +L A H G +++G + KT +
Sbjct: 494 YAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKT-NLH 552
Query: 438 PDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
D+ TCLID+ G+ G+L++A + P
Sbjct: 553 LDVFVATCLIDVYGKCGRLVDAMSLFYQVP 582
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 204/406 (50%), Gaps = 23/406 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+L C + + + +H V+K G++ D+ VSN ++N+YAK G + ARK F +M
Sbjct: 318 TVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQM 377
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
++VSW+++I+ + Q + + A FF +M L P+ S S A + +
Sbjct: 378 FITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSR 437
Query: 121 QIHAYSLKFGYASISFV-GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+H + ++ G+ V GN+++ MY K+G A V+ +++S+N LI G+ +N
Sbjct: 438 SVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQN 497
Query: 180 QQPEKGFEVFKLMLR-QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ EV+K+M + ++P++ ++ L + L++GM +H +K L + FV
Sbjct: 498 GLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFV 557
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++ +Y K + +A F + ++ ++WN I+ EK L +F EM D G
Sbjct: 558 ATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEML-DEG 616
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNAL------VNMYAKCG 352
V+PD TF S+L+AC+ V+ GK RL Q+ G+ +L V++ + G
Sbjct: 617 VKPDHVTFVSLLSACSHSGFVEEGKWC------FRLMQEYGIKPSLKHYGCMVDLLGRAG 670
Query: 353 LISCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSAL-KLFE 393
+ +Y +M L + W ++ A H N LG A +LFE
Sbjct: 671 YLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFE 716
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 323 KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH 382
K +HA L+ Q + + LVN+YA G +S S F+++ ++V +WN++I+A+ ++
Sbjct: 136 KCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHN 195
Query: 383 RLGGSALKLFEQ-MKATGIKPDSVTFIGLLTAC 414
A+ F Q + + I+PD TF +L AC
Sbjct: 196 GHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC 228
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 208/578 (35%), Positives = 319/578 (55%), Gaps = 13/578 (2%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L CS L+ G ++HA G+ D+ VS +++LY +C + AR VF +M R+
Sbjct: 106 VLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRD 165
Query: 68 LVSWSAMISGH------HQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQ 121
+V+W+AM++G+ H A HLL ++ L PN S + A +L +G
Sbjct: 166 VVAWNAMLAGYANHGMYHHAIAHLLDMQ--DHGGLRPNASTLVSLLPLLAQHGALFQGTS 223
Query: 122 IHAYSLKFGYASIS---FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
IHAY L+ +G +L+ MY K A V+ N V+++ALI GFV
Sbjct: 224 IHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVL 283
Query: 179 NQQPEKGFEVFKLMLRQGL-LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ + F +FK ML +GL S A L +C+ DL G LH L K + ++
Sbjct: 284 CDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLT 343
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
N+++++Y+K LI EA F I KD IS+ ++ C E+ VFK+M +
Sbjct: 344 ASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACN 403
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
+ PD T S++ AC+ LA++QHGK H +I L + + N+L++MYAKCG I S
Sbjct: 404 -MEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLS 462
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++F++M R+VVSWNT+IA + H LG A LF MK G PD VTFI L+ AC+H+
Sbjct: 463 RQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHS 522
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV EG+ +F++M YGI P +EH+ C++DLL R G L EA ++ + PL D V G
Sbjct: 523 GLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGA 582
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL ACR+ +++ +G+++++ + L P T +VLLSN++++ G + + A R + K G
Sbjct: 583 LLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGF 642
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KK P YS IE+ G+ F + SH +I + L +
Sbjct: 643 KKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNI 680
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 201/414 (48%), Gaps = 21/414 (5%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPD---VIVSNHVLNLYAKCGKMILARK 58
A ++ SLL ++ AL QG S+HA L+ ++ + V++ +L++YAKC +++ A +
Sbjct: 202 ASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACR 261
Query: 59 VFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL----LPNEYIFASAISACAGIQ 114
VF M RN V+WSA+I G A F M + + ASA+ CA +
Sbjct: 262 VFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLA 321
Query: 115 SLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIA 174
L G Q+HA K G + NSL+SMY K G ++A + + E + +S+ AL++
Sbjct: 322 DLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLS 381
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
G V+N + E+ F VFK M + PD + + CS L+ G H + L
Sbjct: 382 GCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLAL 441
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
+ N+++ +Y+K I + + F + +D++SWNT IA ++ ++F M
Sbjct: 442 ETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMK 501
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQ-----IHAHLIRMRLNQDVGVGNALVNMYA 349
N G PDD TF ++AAC+ V GK H + I R+ + +V++ A
Sbjct: 502 N-QGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI----CMVDLLA 556
Query: 350 KCGLISCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSALKLFEQMKATG 399
+ GL+ +Y+ M L +V W ++ A H N LG ++ +++ G
Sbjct: 557 RGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEG 610
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 217/437 (49%), Gaps = 9/437 (2%)
Query: 51 GKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAI 107
G++ LAR+VFD + + +++A+I + G A++ + M + PN+Y F +
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 108 SACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLV 167
AC+ + L G+ IHA++ G + FV +LI +Y++ A V+ + ++V
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 168 SFNALIAGFVENQQPEKGF-EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCL 226
++NA++AG+ + + + GL P+ + L + + L +G +H
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 227 TVKCKLESNP---FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY 283
++ LE N +G ++ +Y+K + A + F + ++ ++W+ I C
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287
Query: 284 EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA 343
+ ++FK+M + + AS L CA LA + G Q+HA + + ++ D+ N+
Sbjct: 288 TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNS 347
Query: 344 LVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPD 403
L++MYAK GLI+ + F+E+ ++ +S+ +++ + A +F++M+A ++PD
Sbjct: 348 LLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPD 407
Query: 404 SVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYT 463
T + L+ AC+H ++ G+ S+ G++ + LID+ + GK+ + +
Sbjct: 408 IATMVSLIPACSHLAALQHGKCSHGSV-IIRGLALETSICNSLIDMYAKCGKIDLSRQVF 466
Query: 464 KKFPLGQDPIVLGTLLS 480
K P +D + T+++
Sbjct: 467 DKMP-ARDVVSWNTMIA 482
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 156/330 (47%), Gaps = 6/330 (1%)
Query: 157 VYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSND 216
V+ P+ ++NALI + ++++ MLR + P++++F L+ CS D
Sbjct: 56 VFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVD 115
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
LR G +H L ++ FV ++ LY + G A F + +D+++WN +A
Sbjct: 116 LRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAG 175
Query: 277 CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
++ Y ++ +M + G+RP+ T S+L A ++ G IHA+ +R L Q
Sbjct: 176 YANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQ 235
Query: 337 D---VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFE 393
+ V +G AL++MYAKC + + ++F+ M RN V+W+ +I A LF+
Sbjct: 236 NEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFK 295
Query: 394 QMKATGIKPDSVTFIG-LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
M G+ S T + L C + G + K+ GI D+ L+ + +
Sbjct: 296 DMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKS-GIHADLTASNSLLSMYAK 354
Query: 453 AGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
AG + EA + + + +D I G LLS C
Sbjct: 355 AGLINEATMFFDEIAV-KDTISYGALLSGC 383
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 206/587 (35%), Positives = 327/587 (55%), Gaps = 20/587 (3%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAK-CGKMIL--ARKVFD 61
++++ C K + G+ L VLK G V V +++++ K C L ARKVFD
Sbjct: 160 TAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFD 219
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL----LPNEYIFASAISACAGIQSLV 117
+M E+N+V+W+ MI+ Q G + A++ F +M + +P+ + IS CA IQ L
Sbjct: 220 KMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLS 279
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+++H++ ++ G VG SL+ MY K G +A V+ E N++S+ AL+ G+V
Sbjct: 280 LGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYV 339
Query: 178 ENQ--QPEKGFEVFKLMLRQG-LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
+ +F ML QG + P+ F+F+G L+ C+ D G +H T+K L +
Sbjct: 340 RGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSA 399
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY----EKGLSVF 290
VGN ++++Y+K + A K F ++ EK+L+S + ++ D+ E+ L
Sbjct: 400 IDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVS--ETVVDDTNVKDFNLNSEQDLDRE 457
Query: 291 KEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
E G FT+AS+L+ A + ++ G+QIHA ++++ D+ V NAL++MY+K
Sbjct: 458 VEYV---GSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSK 514
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGL 410
CG + ++FN+M NV++W +II A H AL+LF M TG+KP+ VT+I +
Sbjct: 515 CGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAV 574
Query: 411 LTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQ 470
L+AC+H GL+ E +F SM +GI P +EH+ C++DLLGR+G L EA E+ P
Sbjct: 575 LSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDA 634
Query: 471 DPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARK 530
D +V T L +CR+ R+ +GE AK + +P + Y+LLSNLYA++G W DVA RK
Sbjct: 635 DALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAAIRK 694
Query: 531 MLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
+K + KE S IEV+ KF V + H K +I L L+L
Sbjct: 695 NMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELAL 741
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 223/462 (48%), Gaps = 14/462 (3%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM-- 63
S LL C +TK G LH + + D ++ N ++ LY+K I A +F M
Sbjct: 56 SLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMEN 115
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL----LPNEYIFASAISACAGIQSLVKG 119
S+R++VS+S++IS L A+E F Q+ L PNEY F + I AC G
Sbjct: 116 SKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTG 175
Query: 120 QQIHAYSLKFGY-ASISFVGNSLISMYMKVGYSSD---ALLVYGEAFEPNLVSFNALIAG 175
+ + LK GY S VG LI M++K +D A V+ + E N+V++ +I
Sbjct: 176 LCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITR 235
Query: 176 FVENQQPEKGFEVF-KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
+ ++ ++F ++++ G +PDRF+ G + +C+ L G LH ++ L
Sbjct: 236 LAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVL 295
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA-CSHCADYEK-GLSVFKE 292
+ VG +++ +Y+K L+ EA K F + E +++SW + YE+ + +F
Sbjct: 296 DLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSN 355
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
M GV P+ FTF+ +L ACA L G+Q+H I++ L+ VGN LV++YAK G
Sbjct: 356 MLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSG 415
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
+ + K F+ + +N+VS + + S L +++ G S T+ LL+
Sbjct: 416 RMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLS 475
Query: 413 ACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
G + +GE ++M G D+ LI + + G
Sbjct: 476 GAACIGTIGKGEQ-IHAMVVKIGFRTDLSVNNALISMYSKCG 516
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 205/406 (50%), Gaps = 26/406 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++ L+ C++ + L G LH+ V++ G+ D+ V ++++YAKCG + ARKVFD M
Sbjct: 264 TLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGM 323
Query: 64 SERNLVSWSAMISGHHQ--AGEHLLALEFFSQMHL----LPNEYIFASAISACAGIQSLV 117
E N++SW+A+++G+ + G A+ FS M L PN + F+ + ACA +
Sbjct: 324 REHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFD 383
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL----I 173
G+Q+H ++K G ++I VGN L+S+Y K G A + FE NLVS + +
Sbjct: 384 FGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNV 443
Query: 174 AGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE 233
F N + + EV + G F++A L + + KG +H + VK
Sbjct: 444 KDFNLNSEQDLDREVEYV----GSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFR 499
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
++ V N ++++YSK A + F +E+ ++I+W + I + K L +F M
Sbjct: 500 TDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNM 559
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG----NALVNMYA 349
+ GV+P+D T+ ++L+AC+ + + + H MR N + +V++
Sbjct: 560 L-ETGVKPNDVTYIAVLSACSHVGLIDEAWK---HFTSMRDNHGIVPRMEHYACMVDLLG 615
Query: 350 KCGLISCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSALKL 391
+ GL+S + + N M + + W T + + H N +LG A K+
Sbjct: 616 RSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKM 661
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 3/183 (1%)
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T + +L C + GK +H L L D + N+L+ +Y+K ++ +F M
Sbjct: 54 TSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSM 113
Query: 365 LH--RNVVSWNTIIAAHANHRLGGSALKLFEQ-MKATGIKPDSVTFIGLLTACNHAGLVK 421
+ R+VVS+++II+ AN+R A+++F+Q + G+ P+ F ++ AC G K
Sbjct: 114 ENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFK 173
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
G F + KT + LID+ + L + E K F ++ V+ L
Sbjct: 174 TGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMI 233
Query: 482 CRL 484
RL
Sbjct: 234 TRL 236
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 212/614 (34%), Positives = 329/614 (53%), Gaps = 44/614 (7%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMI-------- 54
++ +LL C + L G LHA K I P +SNH LY+KCG +
Sbjct: 10 QTFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHL 69
Query: 55 -----------------------LARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFF 91
+AR+VFDE+ + ++VS++ +I+ + GE L F
Sbjct: 70 TQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLF 129
Query: 92 SQMHLLP---NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKV 148
++ L + + + I+AC LV+ Q+H + + G+ + V N++++ Y +
Sbjct: 130 EEVRELRLGLDGFTLSGVITACGDDVGLVR--QLHCFVVVCGHDCYASVNNAVLACYSRK 187
Query: 149 GYSSDALLVY---GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA 205
G+ S+A V+ GE + VS+NA+I ++++ + +F+ M+R+GL D F+ A
Sbjct: 188 GFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMA 247
Query: 206 GGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF-NLIGEAEKAFRLIEE 264
L + DL G H + +K N VG+ ++ LYSK + E K F I
Sbjct: 248 SVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITA 307
Query: 265 KDLISWNTFIAACSHCADY-EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGK 323
DL+ WNT I+ S D E GL F+EM + G RPDD +F + +AC+ L+S GK
Sbjct: 308 PDLVLWNTMISGFSLYEDLSEDGLWCFREMQRN-GFRPDDCSFVCVTSACSNLSSPSLGK 366
Query: 324 QIHAHLIRMRLNQD-VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH 382
Q+HA I+ + + V V NALV MY+KCG + + ++F+ M N VS N++IA +A H
Sbjct: 367 QVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQH 426
Query: 383 RLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEH 442
+ +L+LFE M I P+S+TFI +L+AC H G V+EG+ YFN M++ + I P+ EH
Sbjct: 427 GVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEH 486
Query: 443 FTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQ 502
++C+IDLLGRAGKL EAE + P I TLL ACR +V + + A + L+
Sbjct: 487 YSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLE 546
Query: 503 PTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
P +PYV+LSN+YAS W + A ++++++ G+KK+P S IE+ F + SH
Sbjct: 547 PYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSH 606
Query: 563 SKIGEIN-YMLKTL 575
I EI+ YM K L
Sbjct: 607 PMIKEIHVYMGKML 620
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 189/574 (32%), Positives = 322/574 (56%), Gaps = 7/574 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS--E 65
LL CS +ALQ G +H +G+ D+ VS +L++YAKCG + A+ +F+ +S +
Sbjct: 113 LLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQD 172
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
R++V+W+AMI+ H + +QM + PN S + +L +G+ I
Sbjct: 173 RDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAI 232
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
HAY ++ + + +L+ MY K A ++ + N V ++A+I G+V +
Sbjct: 233 HAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSI 292
Query: 183 EKGFEVFKLML-RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
++ ML GL P + A L C+ DL++G LHC +K ++ + VGN+
Sbjct: 293 SDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNS 352
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++++Y+K ++ A + KD +S++ I+ C EK L +F++M + G+ P
Sbjct: 353 LISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSS-GIAP 411
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
T ++L AC+ LA++QHG H + + D + NA+++MY+KCG I+ S ++F
Sbjct: 412 YLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIF 471
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ M +R+++SWNT+I + H L AL LF++++A G+KPD VT I +L+AC+H+GLV
Sbjct: 472 DRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVT 531
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
EG+ +F+SM + + I P + H+ C++DLL RAG L EA + ++ P + + G LL+A
Sbjct: 532 EGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAA 591
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
CR +++ +GE+++K++ L P T +VL+SN+Y+S G W D A R + + G KK P
Sbjct: 592 CRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSP 651
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S +E+ G F SH + IN L+ L
Sbjct: 652 GCSWVEISGVIHVFIGGHQSHPQSASINKKLQEL 685
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 216/430 (50%), Gaps = 7/430 (1%)
Query: 55 LARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFS---QMHLLPNEYIFASAISACA 111
LAR VFD++ + ++V W+ MI + +G ++ + Q+ + P + F + AC+
Sbjct: 59 LARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACS 118
Query: 112 GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG--YSSDALLVYGEAFEPNLVSF 169
+Q+L G+ IH ++ G + +V +L+ MY K G Y + L + ++V++
Sbjct: 119 SLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAW 178
Query: 170 NALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK 229
NA+IA F + + M + G+ P+ + L +N L +G +H ++
Sbjct: 179 NAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIR 238
Query: 230 CKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSV 289
N + ++ +Y+K +L+ A K F + +K+ + W+ I L++
Sbjct: 239 NFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALAL 298
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
+ +M +G+ P T A++L ACA L ++ GK++H H+I+ ++ D VGN+L++MYA
Sbjct: 299 YDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYA 358
Query: 350 KCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
KCG++ + +EM+ ++ VS++ II+ + AL +F QM+++GI P T I
Sbjct: 359 KCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIA 418
Query: 410 LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLG 469
LL AC+H ++ G + G + D +ID+ + GK+ + E +
Sbjct: 419 LLPACSHLAALQHGTC-CHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQ-N 476
Query: 470 QDPIVLGTLL 479
+D I T++
Sbjct: 477 RDIISWNTMI 486
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/446 (28%), Positives = 223/446 (50%), Gaps = 21/446 (4%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ ++ S+L + AL QG ++HA ++ +V++ +L++YAKC + ARK+F+
Sbjct: 210 SSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFN 269
Query: 62 EMSERNLVSWSAMISGH--HQAGEHLLAL--EFFSQMHLLPNEYIFASAISACAGIQSLV 117
++++N V WSAMI G+ H + LAL + L P A+ + ACA + L
Sbjct: 270 TVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLK 329
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+G+++H + +K G + VGNSLISMY K G +A+ E + VS++A+I+G V
Sbjct: 330 RGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCV 389
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+N EK +F+ M G+ P + L CS L+ G H TV ++
Sbjct: 390 QNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTS 449
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+ N I+ +YSK I + + F ++ +D+ISWNT I + LS+F+E+
Sbjct: 450 ICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQEL-QAL 508
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHL-----IRMRLNQDVGVGNALVNMYAKCG 352
G++PDD T ++L+AC+ V GK + + I+ R+ + +V++ A+ G
Sbjct: 509 GLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYI----CMVDLLARAG 564
Query: 353 LISCSYKLFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQM--KATGIKPDSVTFIG 409
+ +Y M NV W ++AA H+ +++ EQ+ K + P+
Sbjct: 565 NLDEAYTFIQRMPFVPNVRIWGALLAACRTHK----NIEMGEQVSKKIQLLGPEGTGNFV 620
Query: 410 LLTACNHAGLVKEGEAYFNSMEKTYG 435
L++ + + AY S+++ +G
Sbjct: 621 LMSNIYSSVGRWDDAAYIRSIQRHHG 646
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 160/329 (48%), Gaps = 6/329 (1%)
Query: 157 VYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSND 216
V+ + +P++V +N +I + + ++ ++ ML+ G+ P F+F L+ CS
Sbjct: 63 VFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQA 122
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLI--EEKDLISWNTFI 274
L+ G ++H L + +V ++ +Y+K + +A+ F I +++D+++WN I
Sbjct: 123 LQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMI 182
Query: 275 AACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRL 334
AA S A + + + +M GV P+ T SIL ++ GK IHA+ IR
Sbjct: 183 AAFSFHALHAQTIHSVAQMQQA-GVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFF 241
Query: 335 NQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQ 394
+V + AL++MYAKC L+ + K+FN + +N V W+ +I + H AL L++
Sbjct: 242 FDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDD 301
Query: 395 MKAT-GIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 453
M G+ P T +L AC +K G+ M K+ G+ D LI + +
Sbjct: 302 MLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKS-GMDLDTTVGNSLISMYAKC 360
Query: 454 GKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G + A + + + +D + ++S C
Sbjct: 361 GIMDNAVGFLDEM-IAKDTVSYSAIISGC 388
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 96/178 (53%), Gaps = 3/178 (1%)
Query: 250 NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
N I A F I + ++ WN I + +++ + ++ M GV P +FTF +
Sbjct: 55 NEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQL-GVTPTNFTFPFL 113
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH--R 367
L AC+ L ++Q G+ IH H + L+ D+ V AL++MYAKCG + + LFN + H R
Sbjct: 114 LKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDR 173
Query: 368 NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
++V+WN +IAA + H L + QM+ G+ P+S T + +L A + +G+A
Sbjct: 174 DIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKA 231
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 198/564 (35%), Positives = 304/564 (53%), Gaps = 4/564 (0%)
Query: 17 ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMIS 76
+L G +H VLKMG + DV V+ +++LY++ G + +A KVF +M R++ SW+AMIS
Sbjct: 162 SLADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMIS 221
Query: 77 GHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYAS 133
G Q G AL +M + + +S + CA +V G +H Y +K G S
Sbjct: 222 GFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLES 281
Query: 134 ISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLML 193
FV N+LI+MY K G DA V+ +LVS+N++IA + +N P FK ML
Sbjct: 282 DVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEML 341
Query: 194 RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK-LESNPFVGNTIMALYSKFNLI 252
G+ PD + I +D R G +H V+C+ LE + +GN ++ +Y+K I
Sbjct: 342 FVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSI 401
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
A F + +D+ISWNT I + + + + M + P+ T+ SIL A
Sbjct: 402 DCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPA 461
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
+ + ++Q G +IH LI+ L DV V L++MY KCG + + LF E+ V W
Sbjct: 462 YSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPW 521
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
N II++ H G AL+LF+ M+A G+K D +TF+ LL+AC+H+GLV E + F++M+K
Sbjct: 522 NAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQK 581
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGE 492
Y I P+++H+ C++DL GRAG L +A P+ D + GTLL+ACR+ + +G
Sbjct: 582 EYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGT 641
Query: 493 RLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTF 552
+ +L + YVLLSN+YA+ G W R + +D GL+K P +S + V
Sbjct: 642 FASDRLLEVDSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVV 701
Query: 553 EKFTVAEFSHSKIGEINYMLKTLS 576
E F SH + EI L+ L+
Sbjct: 702 EVFYAGNQSHPQCAEIYEELRVLN 725
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 146/466 (31%), Positives = 252/466 (54%), Gaps = 14/466 (3%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+ C+ +Q LHA +L +G DV++ ++ LYA G + L+ F + +N
Sbjct: 57 VFRSCTNINVAKQ---LHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKN 113
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISACAGIQSLVKGQQIH 123
+ SW++M+S + + G + +++ +++ L P+ Y F + AC SL G+++H
Sbjct: 114 IFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACL---SLADGEKMH 170
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ LK G+ +V SLI +Y + G A V+ + ++ S+NA+I+GF +N
Sbjct: 171 CWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVA 230
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ V M + + D + + L IC+ SND+ G+++H +K LES+ FV N ++
Sbjct: 231 EALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALI 290
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+YSKF + +A++ F +E +DL+SWN+ IAA D L FKEM G+RPD
Sbjct: 291 NMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLF-VGMRPDL 349
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCSYKLFN 362
T S+ + L+ + G+ +H ++R R L D+ +GNALVNMYAK G I C+ +F
Sbjct: 350 LTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFE 409
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTACNHAGLVK 421
++ R+V+SWNT+I +A + L A+ + M + I P+ T++ +L A +H G ++
Sbjct: 410 QLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQ 469
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+G + K + D+ TCLID+ G+ G+L +A + P
Sbjct: 470 QGMKIHGRLIKN-CLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIP 514
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/441 (26%), Positives = 229/441 (51%), Gaps = 12/441 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+L C+++ + G+ +H V+K G++ DV VSN ++N+Y+K G++ A++VFD M
Sbjct: 250 TVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGM 309
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
R+LVSW+++I+ + Q + + AL FF +M + P+ S S + G+
Sbjct: 310 EVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGR 369
Query: 121 QIHAYSLKFGYASISFV-GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+H + ++ + + V GN+L++MY K+G A V+ + +++S+N LI G+ +N
Sbjct: 370 AVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQN 429
Query: 180 QQPEKGFEVFKLMLR-QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ + + +M + ++P++ ++ L S L++GM +H +K L + FV
Sbjct: 430 GLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFV 489
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++ +Y K + +A F I ++ + WN I++ EK L +FK+M D G
Sbjct: 490 ATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRAD-G 548
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIR-MRLNQDVGVGNALVNMYAKCGLISCS 357
V+ D TF S+L+AC+ V + + + R+ ++ +V+++ + G + +
Sbjct: 549 VKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKA 608
Query: 358 YKLFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
Y L + M + + W T++AA H G + L F + + ++V + LL+ +
Sbjct: 609 YNLVSNMPIQADASIWGTLLAACRIH--GNAELGTFASDRLLEVDSENVGYYVLLSNI-Y 665
Query: 417 AGLVK-EGEAYFNSMEKTYGI 436
A + K EG S+ + G+
Sbjct: 666 ANVGKWEGAVKVRSLARDRGL 686
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
F + +C ++ KQ+HA L+ + QDV + LV +YA G +S S F +
Sbjct: 54 FNLVFRSCT---NINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQ 110
Query: 366 HRNVVSWNTIIAAHANH-RLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+N+ SWN++++A+ R S + E + +G++PD TF +L AC
Sbjct: 111 RKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKAC 160
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 210/585 (35%), Positives = 322/585 (55%), Gaps = 30/585 (5%)
Query: 3 KSISSLL-HHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
K+ S+L HHC G ++H + G+Q D+ VS +L++Y KC + A +F
Sbjct: 133 KACSALADHHC--------GRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFA 184
Query: 62 EMSERNLVSWSAMISG------HHQAGEHLLALEFFSQMH-LLPNEYIFASAISACAGIQ 114
M R+LV+W+AM++G +H A HLL+++ QMH L PN + + A
Sbjct: 185 TMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQM--QMHRLRPNASTLVALLPLLAQQG 242
Query: 115 SLVKGQQIHAYSL----------KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEP 164
+L +G +HAY + K +G +L+ MY K G A V+
Sbjct: 243 ALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR 302
Query: 165 NLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL-LPDRFSFAGGLEICSVSNDLRKGMIL 223
N V+++ALI GFV + + F +FK ML QGL S A L C+ + LR G L
Sbjct: 303 NEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQL 362
Query: 224 HCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY 283
H L K + ++ GN+++++Y+K LI +A F + KD +S++ ++
Sbjct: 363 HALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRA 422
Query: 284 EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA 343
E+ VFK+M + V PD T S++ AC+ LA++QHG+ H +I L + + NA
Sbjct: 423 EEAFLVFKKMQACN-VEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNA 481
Query: 344 LVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPD 403
L++MYAKCG I S ++FN M R++VSWNT+IA + H LG A LF +M G PD
Sbjct: 482 LIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPD 541
Query: 404 SVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYT 463
VTFI LL+AC+H+GLV EG+ +F+ M YG++P +EH+ C++DLL R G L EA E+
Sbjct: 542 GVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFI 601
Query: 464 KKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWG 523
+ PL D V LL ACR+ +++ +G+++++ + L P T +VLLSN+Y++ G +
Sbjct: 602 QSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFD 661
Query: 524 DVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
+ A R + K G KK P S IE+ G+ F + SH + EI
Sbjct: 662 EAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEI 706
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 214/447 (47%), Gaps = 19/447 (4%)
Query: 51 GKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLA--LEFFSQM---HLLPNEYIFAS 105
G + A +FD++ ++ +++ +I + + A L + +M + PN Y F
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 106 AISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPN 165
A+ AC+ + G+ IH +++ G + FV +L+ MY+K DA ++ +
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 166 LVSFNALIAGFVENQQPEKGFEVFKLMLRQ--GLLPDRFSFAGGLEICSVSNDLRKGMIL 223
LV++NA++AG+ + M Q L P+ + L + + L +G +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 224 H------CL----TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTF 273
H CL K KL +G ++ +Y+K + A + F + ++ ++W+
Sbjct: 251 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310
Query: 274 IAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR 333
I C+ + +FK M + AS L ACA L ++ G+Q+HA L +
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370
Query: 334 LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFE 393
++ D+ GN+L++MYAK GLI + LF+EM ++ VS++ +++ + + A +F+
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 453
+M+A ++PD+ T + L+ AC+H ++ G S+ G++ + LID+ +
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSV-IIRGLASETSICNALIDMYAKC 489
Query: 454 GKLLEAEEYTKKFPLGQDPIVLGTLLS 480
G++ + + P +D + T+++
Sbjct: 490 GRIDLSRQVFNMMP-SRDIVSWNTMIA 515
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 155/331 (46%), Gaps = 19/331 (5%)
Query: 145 YMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ--PEKGFEVFKLMLRQGLLPDRF 202
++ G+ S A ++ + P++ ++N LI + + G +++ MLR + P+ +
Sbjct: 67 HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126
Query: 203 SFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLI 262
+F L+ CS D G +H + L+++ FV ++ +Y K + +A F +
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186
Query: 263 EEKDLISWNTFIAACSHCADYEKGLSVFKEMSND-HGVRPDDFTFASILAACAGLASVQH 321
+DL++WN +A +H Y ++ M H +RP+ T ++L A ++
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246
Query: 322 GKQIHAHLIRM----------RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
G +HA+ IR +L V +G AL++MYAKCG + + ++F+ M RN V+
Sbjct: 247 GTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 306
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATG---IKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
W+ +I A LF+ M A G + P S+ L AC ++ GE
Sbjct: 307 WSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRMGEQLHA 364
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+ K+ G+ D+ L+ + +AG + +A
Sbjct: 365 LLAKS-GVHADLTAGNSLLSMYAKAGLIDQA 394
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 128/276 (46%), Gaps = 24/276 (8%)
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYE--KGLSVFKEMSNDHGVRPDDFTFASI 309
+ A F I D+ ++N I A S + GL +++ M H V P+++TF
Sbjct: 73 LSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLR-HRVAPNNYTFPFA 131
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
L AC+ LA G+ IH H I L D+ V AL++MY KC + + +F M R++
Sbjct: 132 LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDL 191
Query: 370 VSWNTIIAAHANHRLGGSALK--LFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG---E 424
V+WN ++A +A+H + A+ L QM+ ++P++ T + LL G + +G
Sbjct: 192 VAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVH 251
Query: 425 AYF---------NSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQD---- 471
AY NS K ++ + T L+D+ + G LL A P +
Sbjct: 252 AYCIRACLHPNRNSKSK---LTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWS 308
Query: 472 PIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTS 507
++ G +L + + ++ LA+ L L PT+ +
Sbjct: 309 ALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA 344
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++ SL+ CS ALQ G H +V+ G+ + + N ++++YAKCG++ L+R+VF+
Sbjct: 441 AATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFN 500
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVK 118
M R++VSW+ MI+G+ G A F +M+ L P+ F +SAC+ +++
Sbjct: 501 MMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIE 560
Query: 119 GQQ 121
G+
Sbjct: 561 GKH 563
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 204/613 (33%), Positives = 335/613 (54%), Gaps = 43/613 (7%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCG----------- 51
KS LL + L G SLHA +K + +SNH +NLY+KCG
Sbjct: 9 KSFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDS 68
Query: 52 --------------------KMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFF 91
K+ +AR++FDE + + VS++ +ISG+ A E + A+ F
Sbjct: 69 TEEPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLF 128
Query: 92 SQMHLLPNE---YIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKV 148
+M L E + + I+AC L+K Q+H +++ G+ S S V N+ ++ Y K
Sbjct: 129 KRMRELGFEVDGFTLSGLIAACCDRVDLIK--QLHCFAVSGGFDSYSSVNNAFVTYYSKG 186
Query: 149 GYSSDALLV-YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGG 207
G +A+ V YG + VS+N++I + ++++ K ++K M+ +G D F+ A
Sbjct: 187 GLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASV 246
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF---NLIGEAEKAFRLIEE 264
L + + L G H +K N VG+ ++ YSK + + ++EK F+ I
Sbjct: 247 LNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILS 306
Query: 265 KDLISWNTFIAACSHCADY-EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGK 323
DL+ WNT I+ S ++ E+ + F++M G RPDD +F + +AC+ L+S GK
Sbjct: 307 PDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRI-GHRPDDCSFVCVTSACSNLSSPSQGK 365
Query: 324 QIHAHLIRMRLNQD-VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH 382
QIH I+ + + + V NAL+++Y K G + + ++F+ M N VS+N +I +A H
Sbjct: 366 QIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQH 425
Query: 383 RLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEH 442
G AL+L+++M +GI P+++TF+ +L+AC H G V EG+ YFN+M++T+ I P+ EH
Sbjct: 426 GHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEH 485
Query: 443 FTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQ 502
++C+IDLLGRAGKL EAE + P + LL ACR +++ + ER AK+L +Q
Sbjct: 486 YSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQ 545
Query: 503 PTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
P +PYV+L+N+YA G W ++A RK ++ ++K+P S IEV+ F ++SH
Sbjct: 546 PLAATPYVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSH 605
Query: 563 SKIGEINYMLKTL 575
I E+N L+ +
Sbjct: 606 PMIREVNEYLEEM 618
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 181/539 (33%), Positives = 310/539 (57%), Gaps = 6/539 (1%)
Query: 41 NHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM----HL 96
N ++NLY KC ++ +ARK+FD M RN+VSWSA+++G+ Q G L E F +M ++
Sbjct: 61 NSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNI 120
Query: 97 LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALL 156
PNEY+ A+AIS+C Q V+G+Q H Y+LK G +V N+LI +Y K A+
Sbjct: 121 FPNEYVIATAISSCDS-QMYVEGKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQ 179
Query: 157 VYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSND 216
+ ++ +N ++ G +++ + +V KL++ +G+ + ++ +C+ D
Sbjct: 180 ILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKD 239
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
+ G +H +K ++ + ++G++I+ +Y K + F ++ ++++SW + IAA
Sbjct: 240 ITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAA 299
Query: 277 CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
+E+ L++F +M D + P+++T A + + AGL+++ G Q+HA + L
Sbjct: 300 YFQNEFFEEALNLFSKMEID-CIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKG 358
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
+V VGNAL+ MY K G I + +F+ M N+++WN II H++H LG AL +F+ M
Sbjct: 359 NVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMM 418
Query: 397 ATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
ATG +P+ VTFIG++ AC H LV EG YFN + K + I P +EH+TC++ LL R+G+L
Sbjct: 419 ATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRL 478
Query: 457 LEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLY 516
EAE + + + D + TLL+AC + + G ++A+ L L+P Y+LLSN++
Sbjct: 479 DEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNMH 538
Query: 517 ASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
A W V RK++++ +KKEP S +E++ FT + H + I +K L
Sbjct: 539 ARVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDL 597
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 143/283 (50%), Gaps = 5/283 (1%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C+ K + G +HA +LK I DV + + ++++Y KCG ++ R FD + RN+VSW
Sbjct: 234 CASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSW 293
Query: 72 SAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
+++I+ + Q AL FS+M + PNEY A ++ AG+ +L G Q+HA + K
Sbjct: 294 TSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEK 353
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
G VGN+LI MY K G A V+ N++++NA+I G + ++ +
Sbjct: 354 SGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSM 413
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVGNTIMALYS 247
F+ M+ G P+ +F G + C+ + +G + L + ++ I+ L S
Sbjct: 414 FQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLS 473
Query: 248 KFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGLSV 289
+ + EAE R + D++SW T + AC Y+KG +
Sbjct: 474 RSGRLDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKI 516
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 176/381 (46%), Gaps = 6/381 (1%)
Query: 20 QGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG-- 77
+G H LK G++ V N ++ LY+KC + A ++ + ++ ++ +++G
Sbjct: 141 EGKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLL 200
Query: 78 -HHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF 136
H E + L+ + N + + CA ++ + G+Q+HA LK +
Sbjct: 201 QHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVY 260
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
+G+S+I MY K G + N+VS+ ++IA + +N+ E+ +F M
Sbjct: 261 IGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDC 320
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
+ P+ ++ A + + L G LH K L+ N VGN ++ +Y K I A+
Sbjct: 321 IPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQ 380
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
F + ++I+WN I SH ++ LS+F++M G RP+ TF ++ ACA L
Sbjct: 381 SVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMAT-GERPNYVTFIGVILACAHL 439
Query: 317 ASVQHGKQIHAHLIR-MRLNQDVGVGNALVNMYAKCGLISCSYKLF-NEMLHRNVVSWNT 374
V G HL++ R+ + +V + ++ G + + + ++ +VVSW T
Sbjct: 440 KLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRT 499
Query: 375 IIAAHANHRLGGSALKLFEQM 395
++ A H+ K+ E +
Sbjct: 500 LLNACYVHKHYDKGRKIAEYL 520
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++ L + + AL G LHA K G++ +V+V N ++ +Y K G ++ A+ VF M
Sbjct: 327 TMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNM 386
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKG 119
+ N+++W+A+I+GH G AL F M PN F I ACA ++ + +G
Sbjct: 387 TCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEG 445
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 10/114 (8%)
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLN-QDVGVG--NALVNMYAKCGLISCSYKLFNEML 365
+L A +++ G+ IHAHL N +D V N+L+N+Y KC +S + KLF+ M
Sbjct: 25 LLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMP 84
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK----PDSVTFIGLLTACN 415
RNVVSW+ ++A + + G+ L++FE K +K P+ +++C+
Sbjct: 85 RRNVVSWSALMAGYMQN---GNPLEVFELFKKMVVKDNIFPNEYVIATAISSCD 135
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 211/614 (34%), Positives = 327/614 (53%), Gaps = 51/614 (8%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNL---YAKCGKMILARKVFDEM 63
SLLH+C K LQ +HA ++K G+ + +L L + A VF+ +
Sbjct: 38 SLLHNC---KTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETI 94
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
E NL+ W+ M GH + + + AL+ + M LLPN Y F + +CA ++ +GQ
Sbjct: 95 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQ 154
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA------------------- 161
QIH + LK GY FV SLIS+Y++ G DA V+ +
Sbjct: 155 QIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRG 214
Query: 162 --------FE----PNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
F+ ++VS+NA+I+G+ E ++ E+FK M++ + PD + +
Sbjct: 215 YIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVS 274
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIE---EKD 266
C+ S + G +H SN + N++M LYSK GE E A L E KD
Sbjct: 275 ACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSK---CGELETACGLFEGLLYKD 331
Query: 267 LISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
+ISWNT I +H Y++ L +F+EM G RP+D T SIL ACA L ++ G+ IH
Sbjct: 332 VISWNTLIGGYTHMNLYKEALLLFQEMLRS-GERPNDVTMLSILPACAHLGAIDIGRWIH 390
Query: 327 AHLIRMRLNQDVGVGN---ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR 383
+ I RL + +L++MYAKCG I ++++FN +LH+++ SWN +I A H
Sbjct: 391 VY-IDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 449
Query: 384 LGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF 443
+A +F +M+ GI+PD +TF+GLL+AC+ +G++ G F +M + Y I+P +EH+
Sbjct: 450 RADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHY 509
Query: 444 TCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQP 503
C+IDLLG +G EAEE + D ++ +LL AC++R +V +GE A+ L ++P
Sbjct: 510 GCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEP 569
Query: 504 TTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHS 563
YVLLSN+YA+ G W +VA R +L D G+KK P S IE+ +F + + H
Sbjct: 570 ENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHP 629
Query: 564 KIGEINYMLKTLSL 577
+ EI ML+ + +
Sbjct: 630 RNREIYGMLEEMEV 643
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 208/578 (35%), Positives = 319/578 (55%), Gaps = 13/578 (2%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L CS L+ G ++HA G+ D+ VS +++LY +C + AR VF +M R+
Sbjct: 106 VLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRD 165
Query: 68 LVSWSAMISGH------HQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQ 121
+V+W+AM++G+ H A HLL ++ L PN S + A +L +G
Sbjct: 166 VVAWNAMLAGYANHGMYHHAIAHLLDMQ--DHGGLRPNASTLVSLLPLLAQHGALFQGTS 223
Query: 122 IHAYSLKFGYASIS---FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
IHAY L+ +G +L+ MY K A V+ N V+++ALI GFV
Sbjct: 224 IHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVL 283
Query: 179 NQQPEKGFEVFKLMLRQGL-LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ + F +FK ML +GL S A L +C+ DL G LH L K + ++
Sbjct: 284 CDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLT 343
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
N+++++Y+K LI EA F I KD IS+ ++ C E+ VFK+M +
Sbjct: 344 ASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACN 403
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
+ PD T S++ AC+ LA++QHGK H +I L + + N+L++MYAKCG I S
Sbjct: 404 -MEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLS 462
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++F++M R+VVSWNT+IA + H LG A LF MK G PD VTFI L+ AC+H+
Sbjct: 463 RQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHS 522
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV EG+ +F++M YGI P +EH+ C++DLL R G L EA ++ + PL D V G
Sbjct: 523 GLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGA 582
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL ACR+ +++ +G+++++ + L P T +VLLSN++++ G + + A R + K G
Sbjct: 583 LLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGF 642
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KK P YS IE+ G+ F + SH +I + L +
Sbjct: 643 KKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNI 680
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 201/414 (48%), Gaps = 21/414 (5%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPD---VIVSNHVLNLYAKCGKMILARK 58
A ++ SLL ++ AL QG S+HA L+ ++ + V++ +L++YAKC +++ A +
Sbjct: 202 ASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACR 261
Query: 59 VFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL----LPNEYIFASAISACAGIQ 114
VF M RN V+WSA+I G A F M + + ASA+ CA +
Sbjct: 262 VFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLA 321
Query: 115 SLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIA 174
L G Q+HA K G + NSL+SMY K G ++A + + E + +S+ AL++
Sbjct: 322 DLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLS 381
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
G V+N + E+ F VFK M + PD + + CS L+ G H + L
Sbjct: 382 GCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLAL 441
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
+ N+++ +Y+K I + + F + +D++SWNT IA ++ ++F M
Sbjct: 442 ETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMK 501
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQ-----IHAHLIRMRLNQDVGVGNALVNMYA 349
N G PDD TF ++AAC+ V GK H + I R+ + +V++ A
Sbjct: 502 N-QGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI----CMVDLLA 556
Query: 350 KCGLISCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSALKLFEQMKATG 399
+ GL+ +Y+ M L +V W ++ A H N LG ++ +++ G
Sbjct: 557 RGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEG 610
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 217/437 (49%), Gaps = 9/437 (2%)
Query: 51 GKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAI 107
G++ LAR+VFD + + +++A+I + G A++ + M + PN+Y F +
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 108 SACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLV 167
AC+ + L G+ IHA++ G + FV +LI +Y++ A V+ + ++V
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 168 SFNALIAGFVENQQPEKGF-EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCL 226
++NA++AG+ + + + GL P+ + L + + L +G +H
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 227 TVKCKLESNP---FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY 283
++ LE N +G ++ +Y+K + A + F + ++ ++W+ I C
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287
Query: 284 EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA 343
+ ++FK+M + + AS L CA LA + G Q+HA + + ++ D+ N+
Sbjct: 288 TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNS 347
Query: 344 LVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPD 403
L++MYAK GLI+ + F+E+ ++ +S+ +++ + A +F++M+A ++PD
Sbjct: 348 LLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPD 407
Query: 404 SVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYT 463
T + L+ AC+H ++ G+ S+ G++ + LID+ + GK+ + +
Sbjct: 408 IATMVSLIPACSHLAALQHGKCSHGSV-IIRGLALETSICNSLIDMYAKCGKIDLSRQVF 466
Query: 464 KKFPLGQDPIVLGTLLS 480
K P +D + T+++
Sbjct: 467 DKMP-ARDVVSWNTMIA 482
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 156/330 (47%), Gaps = 6/330 (1%)
Query: 157 VYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSND 216
V+ P+ ++NALI + ++++ MLR + P++++F L+ CS D
Sbjct: 56 VFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVD 115
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
LR G +H L ++ FV ++ LY + G A F + +D+++WN +A
Sbjct: 116 LRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAG 175
Query: 277 CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
++ Y ++ +M + G+RP+ T S+L A ++ G IHA+ +R L Q
Sbjct: 176 YANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQ 235
Query: 337 D---VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFE 393
+ V +G AL++MYAKC + + ++F+ M RN V+W+ +I A LF+
Sbjct: 236 NEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFK 295
Query: 394 QMKATGIKPDSVTFIG-LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
M G+ S T + L C + G + K+ GI D+ L+ + +
Sbjct: 296 DMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKS-GIHADLTASNSLLSMYAK 354
Query: 453 AGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
AG + EA + + + +D I G LLS C
Sbjct: 355 AGLINEATMFFDEIAV-KDTISYGALLSGC 383
>gi|225457491|ref|XP_002267777.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22070
[Vitis vinifera]
gi|296087996|emb|CBI35279.3| unnamed protein product [Vitis vinifera]
Length = 598
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 201/561 (35%), Positives = 315/561 (56%), Gaps = 20/561 (3%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
++LL ++T+ Q G +LHA ++K + + ++NH+LN+YAKCG + A K+FD
Sbjct: 39 ATLLRRFAETRDSQHGRALHAKLIKGPLHNSLFLNNHILNMYAKCGHLPHAHKLFDHFPH 98
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACA----------- 111
RN VSWS +I+G Q AL FSQMH NE+ SA+ AC+
Sbjct: 99 RNAVSWSVLIAGFVQHNRPSCALVLFSQMHAAGVNINEFTLVSALHACSLYDNDSDNNEG 158
Query: 112 --GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSF 169
L + Q++A+ ++ G+ F+ N ++ ++ ++AL V+ ++VS+
Sbjct: 159 YYYSYYLSRLYQVYAFVVRLGFEWNVFLMNVFMTALIRSRKLAEALEVFEACRGKDVVSW 218
Query: 170 NALIAGFVENQQPE-KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV 228
NA++AG V+ E GF ++ M +G+ PD F+F+G L + D G+ +H V
Sbjct: 219 NAVMAGLVQFCCGEVPGF--WRRMCCEGVKPDNFAFSGVLSGLAALGDGGMGVQVHGQLV 276
Query: 229 KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLS 288
KC +GN+++ +Y K + KAF + E+D+ +WN A C +C + L
Sbjct: 277 KCGHGGEVCIGNSLVDMYLKCGSLENGIKAFEEMVERDVCTWNQMAAGCLNCGKPGRALE 336
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMY 348
+ +EM GVR + FT A+ L ACA LAS++ GK+ H I++ + DV V NAL++MY
Sbjct: 337 LIEEMRRS-GVRMNKFTLATALTACANLASLEEGKKAHGLRIKLGNDVDVCVDNALLDMY 395
Query: 349 AKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
AKCG + + K+F + R+VVSW T+I A + AL++FEQM+A G P+ +TFI
Sbjct: 396 AKCGSMGDALKVFGTVEARSVVSWTTMIMGFAQNGQARKALEIFEQMRAEGKAPNYITFI 455
Query: 409 GLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
+L AC+ GL+ EG YF SM++ +GISP +H+ C++D+LGRAG + EA E ++ P
Sbjct: 456 CVLYACSQGGLINEGWEYFLSMDRDHGISPGEDHYACMVDMLGRAGHIKEARELIRRMPF 515
Query: 469 GQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGA 528
+V TLL ACR+ DV G AKQ L +S YV+LSN++A W V
Sbjct: 516 QASVLVWQTLLGACRVHGDVETGLLAAKQALSLDKHDSSTYVVLSNMFADGRNWKGVGSL 575
Query: 529 RKMLKDSGLKKEPSYSMIEVQ 549
R++++ +KK P S I++
Sbjct: 576 RELMETRDVKKMPGSSWIQLN 596
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 182/375 (48%), Gaps = 18/375 (4%)
Query: 99 NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY 158
+E ++A+ + A + G+ +HA +K + F+ N +++MY K G+ A ++
Sbjct: 34 DEDLYATLLRRFAETRDSQHGRALHAKLIKGPLHNSLFLNNHILNMYAKCGHLPHAHKLF 93
Query: 159 GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSV---SN 215
N VS++ LIAGFV++ +P +F M G+ + F+ L CS+ +
Sbjct: 94 DHFPHRNAVSWSVLIAGFVQHNRPSCALVLFSQMHAAGVNINEFTLVSALHACSLYDNDS 153
Query: 216 DLRKGMI----------LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK 265
D +G ++ V+ E N F+ N M + + EA + F K
Sbjct: 154 DNNEGYYYSYYLSRLYQVYAFVVRLGFEWNVFLMNVFMTALIRSRKLAEALEVFEACRGK 213
Query: 266 DLISWNTFIAA-CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ 324
D++SWN +A C G ++ M + GV+PD+F F+ +L+ A L G Q
Sbjct: 214 DVVSWNAVMAGLVQFCCGEVPGF--WRRMCCE-GVKPDNFAFSGVLSGLAALGDGGMGVQ 270
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
+H L++ +V +GN+LV+MY KCG + K F EM+ R+V +WN + A N
Sbjct: 271 VHGQLVKCGHGGEVCIGNSLVDMYLKCGSLENGIKAFEEMVERDVCTWNQMAAGCLNCGK 330
Query: 385 GGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFT 444
G AL+L E+M+ +G++ + T LTAC + ++EG+ + + G D+
Sbjct: 331 PGRALELIEEMRRSGVRMNKFTLATALTACANLASLEEGKKA-HGLRIKLGNDVDVCVDN 389
Query: 445 CLIDLLGRAGKLLEA 459
L+D+ + G + +A
Sbjct: 390 ALLDMYAKCGSMGDA 404
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++++ L C+ +L++G H +K+G DV V N +L++YAKCG M A KVF +
Sbjct: 352 TLATALTACANLASLEEGKKAHGLRIKLGNDVDVCVDNALLDMYAKCGSMGDALKVFGTV 411
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACA 111
R++VSW+ MI G Q G+ ALE F QM PN F + AC+
Sbjct: 412 EARSVVSWTTMIMGFAQNGQARKALEIFEQMRAEGKAPNYITFICVLYACS 462
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 198/591 (33%), Positives = 327/591 (55%), Gaps = 20/591 (3%)
Query: 4 SISSLLHHCSK---TKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
++ S++ CS + L G +HA L+ G + + + N ++ +Y K GK+ ++ +
Sbjct: 201 TLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLL 259
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLV 117
R+LV+W+ ++S Q + L ALE+ +M L P+E+ +S + AC+ ++ L
Sbjct: 260 GSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLR 319
Query: 118 KGQQIHAYSLKFG-YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G+++HAY+LK G SFVG++L+ MY V+ F+ + +NA+IAG+
Sbjct: 320 TGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGY 379
Query: 177 VENQQPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+N+ ++ +F M GLL + + AG + C S + +H VK L+ +
Sbjct: 380 SQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRD 439
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
FV NT+M +YS+ I A + F +E++DL++WNT I +E L + +M N
Sbjct: 440 RFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQN 499
Query: 296 DH----------GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALV 345
++P+ T +IL +CA L+++ GK+IHA+ I+ L DV VG+ALV
Sbjct: 500 LERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALV 559
Query: 346 NMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV 405
+MYAKCG + S K+F+++ +NV++WN II A+ H G A+ L M G+KP+ V
Sbjct: 560 DMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEV 619
Query: 406 TFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKK 465
TFI + AC+H+G+V EG F M+ YG+ P +H+ C++DLLGRAG++ EA +
Sbjct: 620 TFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNM 679
Query: 466 FPLGQDPI-VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGD 524
P + +LL A R+ ++ IGE A+ L L+P S YVLL+N+Y+S G+W
Sbjct: 680 MPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDK 739
Query: 525 VAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
R+ +K+ G++KEP S IE KF + SH + +++ L+TL
Sbjct: 740 ATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETL 790
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 135/484 (27%), Positives = 251/484 (51%), Gaps = 23/484 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPD-VIVSNHVLNLYAKCGKMILARKVFDE 62
+ +LL + + ++ G +HA V K G D V V+N ++NLY KCG KVFD
Sbjct: 99 AFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR 158
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGI---QSL 116
+SERN VSW+++IS + +ALE F M ++ P+ + S ++AC+ + + L
Sbjct: 159 ISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGL 218
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
+ G+Q+HAY L+ G + SF+ N+L++MY K+G + + ++ G +LV++N +++
Sbjct: 219 MMGKQVHAYGLRKGELN-SFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSL 277
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC-KLESN 235
+N+Q + E + M+ +G+ PD F+ + L CS LR G LH +K L+ N
Sbjct: 278 CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 337
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
FVG+ ++ +Y + + F + ++ + WN IA S ++ L +F M
Sbjct: 338 SFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEE 397
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
G+ + T A ++ AC + + IH +++ L++D V N L++MY++ G I
Sbjct: 398 SAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKID 457
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK-----------ATGIKPDS 404
+ ++F +M R++V+WNT+I + AL L +M+ +KP+S
Sbjct: 458 IAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNS 517
Query: 405 VTFIGLLTACNH-AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYT 463
+T + +L +C + L K E + +++ ++ D+ + L+D+ + G L + +
Sbjct: 518 ITLMTILPSCAALSALAKGKEIHAYAIKNN--LATDVAVGSALVDMYAKCGCLQMSRKVF 575
Query: 464 KKFP 467
+ P
Sbjct: 576 DQIP 579
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 191/365 (52%), Gaps = 9/365 (2%)
Query: 98 PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF-VGNSLISMYMKVGYSSDALL 156
P+ Y F + + A A +Q + G+QIHA+ KFGY S V N+L+++Y K G
Sbjct: 95 PDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYK 154
Query: 157 VYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS---V 213
V+ E N VS+N+LI+ ++ E E F+ ML + + P F+ + CS +
Sbjct: 155 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM 214
Query: 214 SNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTF 273
L G +H ++ K E N F+ NT++A+Y K + ++ +DL++WNT
Sbjct: 215 PEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTV 273
Query: 274 IAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM- 332
+++ + L +EM + GV PD+FT +S+L AC+ L ++ GK++HA+ ++
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLE-GVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
L+++ VG+ALV+MY C + ++F+ M R + WN +IA ++ + AL LF
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 393 EQM-KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLG 451
M ++ G+ +S T G++ AC +G EA + K G+ D L+D+
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR-GLDRDRFVQNTLMDMYS 451
Query: 452 RAGKL 456
R GK+
Sbjct: 452 RLGKI 456
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 102/188 (54%), Gaps = 7/188 (3%)
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD-VGVGNALVNMYAKCGLISC 356
G++PD++ F ++L A A L ++ GKQIHAH+ + D V V N LVN+Y KCG
Sbjct: 92 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 151
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
YK+F+ + RN VSWN++I++ + AL+ F M ++P S T + ++TAC++
Sbjct: 152 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 211
Query: 417 AGLVKEGEAYFNSMEKTYGISP-DIEHF--TCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
+ EG YG+ ++ F L+ + G+ GKL ++ F G+D +
Sbjct: 212 LPM-PEG-LMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFG-GRDLV 268
Query: 474 VLGTLLSA 481
T+LS+
Sbjct: 269 TWNTVLSS 276
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 210/607 (34%), Positives = 323/607 (53%), Gaps = 41/607 (6%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYA--KCGKMILARKVFDEMS 64
+LL C + L+Q +H+ ++K G+ + ++ A G + A +F+ +
Sbjct: 37 TLLSTCKSFQNLKQ---IHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIE 93
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQ 121
+ N W+ MI G+ + + A++F+ +M L PN Y F + +CA + + +G+Q
Sbjct: 94 QPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQ 153
Query: 122 IHAYSLKFGYASISFVGNSLISMYMK--------------------------VGYS---- 151
IH + LK G S FV SLI+MY + GY+
Sbjct: 154 IHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGC 213
Query: 152 -SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
DA ++ E + VS+NA+IAG+ ++ + E+ F+ M R + P+ + L
Sbjct: 214 LDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSA 273
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
C+ S L G + L SN + N ++ +YSK + +A F I EKD+ISW
Sbjct: 274 CAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISW 333
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
N I SH Y++ L++F++M + V P+D TF SIL ACA L ++ GK IHA++
Sbjct: 334 NVMIGGYSHMNSYKEALALFRKMQQSN-VEPNDVTFVSILPACAYLGALDLGKWIHAYID 392
Query: 331 RMRLN-QDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
+ L + + +L++MYAKCG I + ++F M +++ SWN +I+ A H AL
Sbjct: 393 KKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMAL 452
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
+LF QM+ G +PD +TF+G+L+AC+HAGLV+ G F+SM + Y ISP ++H+ C+IDL
Sbjct: 453 ELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDL 512
Query: 450 LGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPY 509
LGRAG EAE K + D + G+LL ACR+ +V +GE AK LF L+P Y
Sbjct: 513 LGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAY 572
Query: 510 VLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEIN 569
VLLSN+YA+ G W DVA R L D G+KK P S IEV +F V + H + +I
Sbjct: 573 VLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIY 632
Query: 570 YMLKTLS 576
ML +
Sbjct: 633 KMLDEID 639
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 198/591 (33%), Positives = 327/591 (55%), Gaps = 20/591 (3%)
Query: 4 SISSLLHHCSK---TKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
++ S++ CS + L G +HA L+ G + + + N ++ +Y K GK+ ++ +
Sbjct: 201 TLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLL 259
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLV 117
R+LV+W+ ++S Q + L ALE+ +M L P+E+ +S + AC+ ++ L
Sbjct: 260 GSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLR 319
Query: 118 KGQQIHAYSLKFG-YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G+++HAY+LK G SFVG++L+ MY V+ F+ + +NA+IAG+
Sbjct: 320 TGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGY 379
Query: 177 VENQQPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+N+ ++ +F M GLL + + AG + C S + +H VK L+ +
Sbjct: 380 SQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRD 439
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
FV NT+M +YS+ I A + F +E++DL++WNT I +E L + +M N
Sbjct: 440 RFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQN 499
Query: 296 DH----------GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALV 345
++P+ T +IL +CA L+++ GK+IHA+ I+ L DV VG+ALV
Sbjct: 500 LERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALV 559
Query: 346 NMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV 405
+MYAKCG + S K+F+++ +NV++WN II A+ H G A+ L M G+KP+ V
Sbjct: 560 DMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEV 619
Query: 406 TFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKK 465
TFI + AC+H+G+V EG F M+ YG+ P +H+ C++DLLGRAG++ EA +
Sbjct: 620 TFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNM 679
Query: 466 FPLGQDPI-VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGD 524
P + +LL A R+ ++ IGE A+ L L+P S YVLL+N+Y+S G+W
Sbjct: 680 MPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDK 739
Query: 525 VAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
R+ +K+ G++KEP S IE KF + SH + +++ L+TL
Sbjct: 740 ATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETL 790
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 135/484 (27%), Positives = 251/484 (51%), Gaps = 23/484 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPD-VIVSNHVLNLYAKCGKMILARKVFDE 62
+ +LL + + ++ G +HA V K G D V V+N ++NLY KCG KVFD
Sbjct: 99 AFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR 158
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGI---QSL 116
+SERN VSW+++IS + +ALE F M ++ P+ + S ++AC+ + + L
Sbjct: 159 ISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGL 218
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
+ G+Q+HAY L+ G + SF+ N+L++MY K+G + + ++ G +LV++N +++
Sbjct: 219 MMGKQVHAYGLRKGELN-SFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSL 277
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC-KLESN 235
+N+Q + E + M+ +G+ PD F+ + L CS LR G LH +K L+ N
Sbjct: 278 CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 337
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
FVG+ ++ +Y + + F + ++ + WN IA S ++ L +F M
Sbjct: 338 SFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEE 397
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
G+ + T A ++ AC + + IH +++ L++D V N L++MY++ G I
Sbjct: 398 SAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKID 457
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK-----------ATGIKPDS 404
+ ++F +M R++V+WNT+I + AL L +M+ +KP+S
Sbjct: 458 IAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNS 517
Query: 405 VTFIGLLTACNH-AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYT 463
+T + +L +C + L K E + +++ ++ D+ + L+D+ + G L + +
Sbjct: 518 ITLMTILPSCAALSALAKGKEIHAYAIKNN--LATDVAVGSALVDMYAKCGCLQMSRKVF 575
Query: 464 KKFP 467
+ P
Sbjct: 576 DQIP 579
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 191/365 (52%), Gaps = 9/365 (2%)
Query: 98 PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF-VGNSLISMYMKVGYSSDALL 156
P+ Y F + + A A +Q + G+QIHA+ KFGY S V N+L+++Y K G
Sbjct: 95 PDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYK 154
Query: 157 VYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS---V 213
V+ E N VS+N+LI+ ++ E E F+ ML + + P F+ + CS +
Sbjct: 155 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM 214
Query: 214 SNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTF 273
L G +H ++ K E N F+ NT++A+Y K + ++ +DL++WNT
Sbjct: 215 PEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTV 273
Query: 274 IAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM- 332
+++ + L +EM + GV PD+FT +S+L AC+ L ++ GK++HA+ ++
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLE-GVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
L+++ VG+ALV+MY C + ++F+ M R + WN +IA ++ + AL LF
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 393 EQM-KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLG 451
M ++ G+ +S T G++ AC +G EA + K G+ D L+D+
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR-GLDRDRFVQNTLMDMYS 451
Query: 452 RAGKL 456
R GK+
Sbjct: 452 RLGKI 456
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 102/188 (54%), Gaps = 7/188 (3%)
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD-VGVGNALVNMYAKCGLISC 356
G++PD++ F ++L A A L ++ GKQIHAH+ + D V V N LVN+Y KCG
Sbjct: 92 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 151
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
YK+F+ + RN VSWN++I++ + AL+ F M ++P S T + ++TAC++
Sbjct: 152 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 211
Query: 417 AGLVKEGEAYFNSMEKTYGISP-DIEHF--TCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
+ EG YG+ ++ F L+ + G+ GKL ++ F G+D +
Sbjct: 212 LPM-PEG-LMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFG-GRDLV 268
Query: 474 VLGTLLSA 481
T+LS+
Sbjct: 269 TWNTVLSS 276
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 198/591 (33%), Positives = 327/591 (55%), Gaps = 20/591 (3%)
Query: 4 SISSLLHHCSK---TKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
++ S++ CS + L G +HA L+ G + + + N ++ +Y K GK+ ++ +
Sbjct: 114 TLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLL 172
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLV 117
R+LV+W+ ++S Q + L ALE+ +M L P+E+ +S + AC+ ++ L
Sbjct: 173 GSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLR 232
Query: 118 KGQQIHAYSLKFG-YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G+++HAY+LK G SFVG++L+ MY V+ F+ + +NA+IAG+
Sbjct: 233 TGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGY 292
Query: 177 VENQQPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+N+ ++ +F M GLL + + AG + C S + +H VK L+ +
Sbjct: 293 SQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRD 352
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
FV NT+M +YS+ I A + F +E++DL++WNT I +E L + +M N
Sbjct: 353 RFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQN 412
Query: 296 DH----------GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALV 345
++P+ T +IL +CA L+++ GK+IHA+ I+ L DV VG+ALV
Sbjct: 413 LERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALV 472
Query: 346 NMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV 405
+MYAKCG + S K+F+++ +NV++WN II A+ H G A+ L M G+KP+ V
Sbjct: 473 DMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEV 532
Query: 406 TFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKK 465
TFI + AC+H+G+V EG F M+ YG+ P +H+ C++DLLGRAG++ EA +
Sbjct: 533 TFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNM 592
Query: 466 FPLGQDPI-VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGD 524
P + +LL A R+ ++ IGE A+ L L+P S YVLL+N+Y+S G+W
Sbjct: 593 MPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDK 652
Query: 525 VAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
R+ +K+ G++KEP S IE KF + SH + +++ L+TL
Sbjct: 653 ATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETL 703
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 135/484 (27%), Positives = 251/484 (51%), Gaps = 23/484 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPD-VIVSNHVLNLYAKCGKMILARKVFDE 62
+ +LL + + ++ G +HA V K G D V V+N ++NLY KCG KVFD
Sbjct: 12 AFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR 71
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGI---QSL 116
+SERN VSW+++IS + +ALE F M ++ P+ + S ++AC+ + + L
Sbjct: 72 ISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGL 131
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
+ G+Q+HAY L+ G + SF+ N+L++MY K+G + + ++ G +LV++N +++
Sbjct: 132 MMGKQVHAYGLRKGELN-SFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSL 190
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK-CKLESN 235
+N+Q + E + M+ +G+ PD F+ + L CS LR G LH +K L+ N
Sbjct: 191 CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 250
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
FVG+ ++ +Y + + F + ++ + WN IA S ++ L +F M
Sbjct: 251 SFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEE 310
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
G+ + T A ++ AC + + IH +++ L++D V N L++MY++ G I
Sbjct: 311 SAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKID 370
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK-----------ATGIKPDS 404
+ ++F +M R++V+WNT+I + AL L +M+ +KP+S
Sbjct: 371 IAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNS 430
Query: 405 VTFIGLLTACNH-AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYT 463
+T + +L +C + L K E + +++ ++ D+ + L+D+ + G L + +
Sbjct: 431 ITLMTILPSCAALSALAKGKEIHAYAIKNN--LATDVAVGSALVDMYAKCGCLQMSRKVF 488
Query: 464 KKFP 467
+ P
Sbjct: 489 DQIP 492
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 191/365 (52%), Gaps = 9/365 (2%)
Query: 98 PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF-VGNSLISMYMKVGYSSDALL 156
P+ Y F + + A A +Q + G+QIHA+ KFGY S V N+L+++Y K G
Sbjct: 8 PDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYK 67
Query: 157 VYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS---V 213
V+ E N VS+N+LI+ ++ E E F+ ML + + P F+ + CS +
Sbjct: 68 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM 127
Query: 214 SNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTF 273
L G +H ++ K E N F+ NT++A+Y K + ++ +DL++WNT
Sbjct: 128 PEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTV 186
Query: 274 IAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM- 332
+++ + L +EM + GV PD+FT +S+L AC+ L ++ GK++HA+ ++
Sbjct: 187 LSSLCQNEQLLEALEYLREMVLE-GVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 245
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
L+++ VG+ALV+MY C + ++F+ M R + WN +IA ++ + AL LF
Sbjct: 246 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 305
Query: 393 EQM-KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLG 451
M ++ G+ +S T G++ AC +G EA + K G+ D L+D+
Sbjct: 306 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR-GLDRDRFVQNTLMDMYS 364
Query: 452 RAGKL 456
R GK+
Sbjct: 365 RLGKI 369
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 102/188 (54%), Gaps = 7/188 (3%)
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD-VGVGNALVNMYAKCGLISC 356
G++PD++ F ++L A A L ++ GKQIHAH+ + D V V N LVN+Y KCG
Sbjct: 5 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 64
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
YK+F+ + RN VSWN++I++ + AL+ F M ++P S T + ++TAC++
Sbjct: 65 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 124
Query: 417 AGLVKEGEAYFNSMEKTYGISP-DIEHF--TCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
+ EG YG+ ++ F L+ + G+ GKL ++ F G+D +
Sbjct: 125 LPM-PEG-LMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFG-GRDLV 181
Query: 474 VLGTLLSA 481
T+LS+
Sbjct: 182 TWNTVLSS 189
>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Vitis vinifera]
Length = 741
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 201/582 (34%), Positives = 326/582 (56%), Gaps = 19/582 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPD--VIVSNHVLNLYAKCGKMILARKVFD 61
+ ++L C++ +L +G +LH + D + ++NHV+N+YAKCG + A ++FD
Sbjct: 65 TYAALFQACARRSSLPEGQALHRHMFLHNPNSDFNLFLTNHVVNMYAKCGSLDYAHQMFD 124
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL--PNEYIFASAISACAGIQSLVKG 119
EM E+N+VSW+A++SG+ Q G F M + P E+ FAS ISAC G + G
Sbjct: 125 EMPEKNIVSWTALVSGYAQHGRSNECFRVFRGMLIWHQPTEFAFASVISACGGDDNC--G 182
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMK-VGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+Q+HA +LK + S +VGN+LI MY K G + +A VY NLVS+N++IAGF
Sbjct: 183 RQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEAWNVYEAMGFRNLVSWNSMIAGFQV 242
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE-ICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ E+F M G+ DR + +C + + L L CLT+K
Sbjct: 243 CGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMGDGLECCFQLQCLTIKTGFILKIE 302
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEE----KDLISWNTFIAACSHCADYEKGLSVFKEM 293
V ++ YS +L GE +R+ E +D++SW IAA + D +K L +F++
Sbjct: 303 VATALVKAYS--SLGGEVSDCYRIFLELDGRQDVVSWTGIIAAFAE-RDPKKALVIFRQF 359
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
+ + PD F+ +L ACAGLA+ +H + +H++++ D+ + NAL++ A+CG
Sbjct: 360 LRE-CLAPDRHMFSIVLKACAGLATERHALTVQSHVLKVGFEDDIVLANALIHACARCGS 418
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
++ S ++F++M R+ VSWN+++ A+A H G AL LF QM A +PD TF+ LL+A
Sbjct: 419 VALSKQVFDKMGSRDTVSWNSMLKAYAMHGQGKEALLLFSQMDA---QPDGATFVALLSA 475
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C+HAG+ +EG F +M +GI P ++H+ C++D+LGRAG++ EA+E K P+ D +
Sbjct: 476 CSHAGMAEEGAKIFETMSNNHGIVPQLDHYACMVDILGRAGQISEAKELIDKMPMEPDSV 535
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
V LL +CR + + + A +L L P + YVL+SN++ +DG + + R+ ++
Sbjct: 536 VWSALLGSCRKHGETKLAKLAAVKLKELDPNNSLGYVLMSNIFCTDGRFNEARLIRREME 595
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
++KEP S IEV +F H + I L+ L
Sbjct: 596 GKIVRKEPGLSWIEVGNQVHEFASGGQQHPEKEAICARLEEL 637
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 188/395 (47%), Gaps = 19/395 (4%)
Query: 96 LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS--FVGNSLISMYMKVGYSSD 153
L+ + + +A+ ACA SL +GQ +H + S F+ N +++MY K G
Sbjct: 59 LVHSHHTYAALFQACARRSSLPEGQALHRHMFLHNPNSDFNLFLTNHVVNMYAKCGSLDY 118
Query: 154 ALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSV 213
A ++ E E N+VS+ AL++G+ ++ + + F VF+ ML P F+FA + C
Sbjct: 119 AHQMFDEMPEKNIVSWTALVSGYAQHGRSNECFRVFRGMLIWH-QPTEFAFASVISAC-- 175
Query: 214 SNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE---KDLISW 270
D G +H L +K +S +VGN ++ +Y K G A++A+ + E ++L+SW
Sbjct: 176 GGDDNCGRQVHALALKTSFDSCVYVGNALIMMYCKS--CGGADEAWNVYEAMGFRNLVSW 233
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS-VQHGKQIHAHL 329
N+ IA C + L +F +M + G+R D T SI + G+ ++ Q+
Sbjct: 234 NSMIAGFQVCGCGNRALELFSQM-HVGGIRFDRATLVSIFSCLCGMGDGLECCFQLQCLT 292
Query: 330 IRMRLNQDVGVGNALVNMYAKC-GLISCSYKLFNEMLHR-NVVSWNTIIAAHANHRLGGS 387
I+ + V ALV Y+ G +S Y++F E+ R +VVSW IIAA A R
Sbjct: 293 IKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWTGIIAAFAE-RDPKK 351
Query: 388 ALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY-FNSMEKTYGISPDIEHFTCL 446
AL +F Q + PD F +L AC AGL E A S G DI L
Sbjct: 352 ALVIFRQFLRECLAPDRHMFSIVLKAC--AGLATERHALTVQSHVLKVGFEDDIVLANAL 409
Query: 447 IDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
I R G + +++ K +D + ++L A
Sbjct: 410 IHACARCGSVALSKQVFDKMG-SRDTVSWNSMLKA 443
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 284 EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG--VG 341
++ L +F ++ + T+A++ ACA +S+ G+ +H H+ N D +
Sbjct: 44 QEALKLFYSITPPPPLVHSHHTYAALFQACARRSSLPEGQALHRHMFLHNPNSDFNLFLT 103
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
N +VNMYAKCG + ++++F+EM +N+VSW +++ +A H ++F M +
Sbjct: 104 NHVVNMYAKCGSLDYAHQMFDEMPEKNIVSWTALVSGYAQHGRSNECFRVFRGM-LIWHQ 162
Query: 402 PDSVTFIGLLTAC 414
P F +++AC
Sbjct: 163 PTEFAFASVISAC 175
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 193/576 (33%), Positives = 335/576 (58%), Gaps = 5/576 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++++LL ++ +++ + +H V+K+G ++V N +L+ Y K + LA +F M
Sbjct: 141 TLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHM 200
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
+E++ V+++A+++G+ + G + A+ F +M L P+E+ FA+ ++A + + GQ
Sbjct: 201 AEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQ 260
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H++ +K + FV N+L+ Y K +A ++ E E + +S+N LI N
Sbjct: 261 QVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNG 320
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ E+ E+F+ + +F FA L I + S +L G +H + S VGN
Sbjct: 321 RVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGN 380
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +Y+K + GEA + F + + + W I+ +E GL +F EM + +
Sbjct: 381 SLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEM-HRAKIG 439
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D T+ASIL ACA LAS+ GKQ+H+ +IR +V G+ALV+MYAKCG I + ++
Sbjct: 440 ADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQM 499
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F EM RN VSWN +I+A+A + GG AL+ FEQM +G++P+SV+F+ +L AC+H GLV
Sbjct: 500 FQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLV 559
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+EG YFNSM + Y + P EH+ ++D+L R+G+ EAE+ + P D I+ ++L+
Sbjct: 560 EEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILN 619
Query: 481 ACRLRRDVVIGERLAKQLFHLQP-TTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
+CR+ ++ + + A QLF+++ +PYV +SN+YA+ G W V +K L++ G++K
Sbjct: 620 SCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRK 679
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P+YS +E++ F+ + SH + EI L L
Sbjct: 680 VPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDEL 715
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 141/477 (29%), Positives = 238/477 (49%), Gaps = 8/477 (1%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM- 94
+VI +N ++ Y K G + AR +FD M +R++V+W+ +I G+ Q L A F+ M
Sbjct: 72 NVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMC 131
Query: 95 --HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSS 152
++P+ A+ +S +S+ + Q+H + +K GY S V NSL+ Y K
Sbjct: 132 RHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLG 191
Query: 153 DALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
A ++ E + V+FNAL+ G+ + +F M G P F+FA L
Sbjct: 192 LACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGI 251
Query: 213 VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNT 272
+D+ G +H VKC N FV N ++ YSK + I EA K F + E D IS+N
Sbjct: 252 QMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNV 311
Query: 273 FIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
I C+ E+ L +F+E+ R F FA++L+ A +++ G+QIH+ I
Sbjct: 312 LITCCAWNGRVEESLELFRELQFTRFDRR-QFPFATLLSIAANSLNLEMGRQIHSQAIVT 370
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
+V VGN+LV+MYAKC + ++F ++ H++ V W +I+ + L LKLF
Sbjct: 371 DAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLF 430
Query: 393 EQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
+M I DS T+ +L AC + + G+ + + ++ G ++ + L+D+ +
Sbjct: 431 VEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRS-GCLSNVFSGSALVDMYAK 489
Query: 453 AGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH--LQPTTTS 507
G + EA + ++ P+ ++ + L+SA D R +Q+ H LQP + S
Sbjct: 490 CGSIKEALQMFQEMPV-RNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVS 545
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 48/124 (38%), Gaps = 31/124 (25%)
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS-------- 371
+H + + A +I+ + + N V + + G + + KLF+EM H+NV+S
Sbjct: 24 RHFQHVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGY 83
Query: 372 -----------------------WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
W +I +A H A LF M G+ PD +T
Sbjct: 84 LKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLA 143
Query: 409 GLLT 412
LL+
Sbjct: 144 TLLS 147
>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
Length = 781
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 187/569 (32%), Positives = 327/569 (57%), Gaps = 5/569 (0%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C++ L +G + H V+K+G++ DV N ++ YAK G + A +VFD M R++V+W
Sbjct: 117 CARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTW 176
Query: 72 SAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQQIHAYSL 127
+ M+ G+ G LAL F +MH + + +A++AC S ++G++IH Y +
Sbjct: 177 NTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYVI 236
Query: 128 KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE 187
+ G VG SL+ MY K G + A V+ +V++N +I G+ N++P++ F+
Sbjct: 237 RHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFD 296
Query: 188 VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYS 247
F M +GL + + L C+ + G +H V+ + + + ++ +Y
Sbjct: 297 CFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYG 356
Query: 248 KFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFA 307
K + +EK F I K L+SWN IAA + Y + +++F E+ N + PD FT +
Sbjct: 357 KVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLN-QPLYPDYFTMS 415
Query: 308 SILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR 367
+++ A L S++H +QIH+++I + ++ + NA+++MYA+ G + S ++F++M+ +
Sbjct: 416 TVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSK 475
Query: 368 NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYF 427
+V+SWNT+I +A H G +AL++F++MK G++P+ TF+ +LTAC+ +GLV EG +F
Sbjct: 476 DVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHF 535
Query: 428 NSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRD 487
N M + YG+ P IEH+ C+ DLLGR G L E ++ + P+ V G+LL+A R + D
Sbjct: 536 NLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQND 595
Query: 488 VVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIE 547
+ I E A+++F L+ T Y++LS++YA G W DV R ++K+ GL++ S++E
Sbjct: 596 IDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVE 655
Query: 548 VQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
+ T F + SHS+ I+ + LS
Sbjct: 656 LHSTACSFANGDMSHSQSRTIHEVSNILS 684
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 154/298 (51%), Gaps = 1/298 (0%)
Query: 164 PNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMIL 223
P+ N +I GF + P ++ ML G PDRF+F ++ C+ L +G
Sbjct: 70 PDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAA 129
Query: 224 HCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY 283
H + +K LE + + N+++A Y+K L+ +AE+ F + +D+++WNT +
Sbjct: 130 HGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLG 189
Query: 284 EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA 343
L+ F+EM + V+ D + LAAC S GK+IH ++IR L QD+ VG +
Sbjct: 190 SLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTS 249
Query: 344 LVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPD 403
L++MY KCG ++ + +F M R VV+WN +I +A + A F QM+A G++ +
Sbjct: 250 LLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVE 309
Query: 404 SVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
VT I LL AC G + + + + P + T L+++ G+ GK+ +E+
Sbjct: 310 VVTAINLLAACAQTESSLYGRSVHGYVVRRQFL-PHVVLETALLEMYGKVGKVESSEK 366
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 163/321 (50%), Gaps = 5/321 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
I++L C + ++Q G +H V++ G++ D+ V +L++Y KCG++ AR VF M
Sbjct: 213 IAALAACCLEVSSMQ-GKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMP 271
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHL--LPNEYIFA-SAISACAGIQSLVKGQQ 121
R +V+W+ MI G+ A + F QM L E + A + ++ACA +S + G+
Sbjct: 272 LRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRS 331
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H Y ++ + + +L+ MY KVG + ++G+ LVS+N +IA ++ +
Sbjct: 332 VHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEM 391
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ +F +L Q L PD F+ + + + LR +H + N + N
Sbjct: 392 YTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNA 451
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y++ + + + F + KD+ISWNT I + + L +F EM + G++P
Sbjct: 452 VLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYN-GLQP 510
Query: 302 DDFTFASILAACAGLASVQHG 322
++ TF S+L AC+ V G
Sbjct: 511 NESTFVSVLTACSVSGLVDEG 531
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 150/317 (47%), Gaps = 2/317 (0%)
Query: 98 PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV 157
P+ + F + CA + L +G+ H +K G + NSL++ Y K+G DA V
Sbjct: 105 PDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERV 164
Query: 158 YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSND 216
+ ++V++N ++ G+V N F+ M + D L C +
Sbjct: 165 FDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVS 224
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
+G +H ++ LE + VG +++ +Y K + A F + + +++WN I
Sbjct: 225 SMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGG 284
Query: 277 CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
+ ++ F +M + G++ + T ++LAACA S +G+ +H +++R +
Sbjct: 285 YALNERPDEAFDCFMQMRAE-GLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLP 343
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
V + AL+ MY K G + S K+F ++ ++ +VSWN +IAA+ + A+ LF ++
Sbjct: 344 HVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELL 403
Query: 397 ATGIKPDSVTFIGLLTA 413
+ PD T ++ A
Sbjct: 404 NQPLYPDYFTMSTVVPA 420
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 109/218 (50%), Gaps = 3/218 (1%)
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ EA +A + D N I + L+ ++ M D G RPD FTF ++
Sbjct: 57 MDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLED-GARPDRFTFPVVVK 115
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
CA L + G+ H +I++ L DV N+LV YAK GL+ + ++F+ M R++V+
Sbjct: 116 CCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVT 175
Query: 372 WNTIIAAHANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSM 430
WNT++ + ++ LG AL F++M A ++ DSV I L AC +G+ +
Sbjct: 176 WNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYV 235
Query: 431 EKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
+ +G+ DI+ T L+D+ + G++ A PL
Sbjct: 236 IR-HGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPL 272
>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 776
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 188/569 (33%), Positives = 322/569 (56%), Gaps = 17/569 (2%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
CS+ ++ G ++HA V+ G+ + +SN V ++YA+CG+M AR+VFD ER+ VSW
Sbjct: 112 CSRALDVRTGKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSW 171
Query: 72 SAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK---------G 119
+A++SG+ +AG LE FS M L N + S I CA S
Sbjct: 172 NALLSGYVRAGAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIA 231
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ +H +K G + F+ +++I MY K G ++A+ ++ +PN++ NA+IAGF
Sbjct: 232 EAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCRE 291
Query: 180 QQPEKGFEVFKL---MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
+ + E L + +G+ P FSF+ L C+++ + G +H +K + +
Sbjct: 292 EAADVAREALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDV 351
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
++G+ ++ LYS + + + FR + ++D++ W + I+ C +E+ L +F+E S
Sbjct: 352 YIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQE-SVR 410
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
G+RPD F +S++ ACA LA + G+QI ++ N+ +GN+ ++M A+ G +
Sbjct: 411 CGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVDA 470
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTACN 415
+ + F EM R+VVSW+ +I++HA+H AL +F +M A P+ +TF+ +LTAC+
Sbjct: 471 ATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILTACS 530
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
H GLV EG Y+ M YG+SP I+H TC++DLLGRAG+L +AE + + D +V
Sbjct: 531 HGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVW 590
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
+LL++CR+ D+ G+ +A ++ L+PT+++ YV+L N+Y G + R ++K+
Sbjct: 591 RSLLASCRIHGDMERGQLVADKIMDLEPTSSASYVILYNMYLDAGELSSASKTRDLMKER 650
Query: 536 GLKKEPSYSMIEVQGTFEKFTVAEFSHSK 564
G+KKEP S IE+ F + SH +
Sbjct: 651 GVKKEPGLSWIELSSGVHSFVAGDKSHPE 679
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 240/479 (50%), Gaps = 30/479 (6%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAK--CGKMILARKVFDEMSER 66
LH AL ++HA + + + + N +L Y + G + A ++ DEM R
Sbjct: 6 LHLLRSCAALPHVAAVHAHLARAHPNASLFLRNCLLASYCRLGVGAPLHAARLLDEMPRR 65
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIH 123
N VS++ +I + +AG L+L F++ + + + +A+A++AC+ + G+ +H
Sbjct: 66 NAVSYNLVIVAYSRAGLPALSLATFARARAWARVVDRFTYAAALAACSRALDVRTGKAVH 125
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A + G + F+ NS+ SMY + G +A V+ A E + VS+NAL++G+V E
Sbjct: 126 AMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVRAGARE 185
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEIC------SVSNDLRKGMI---LHCLTVKCKLES 234
+ EVF LM R GL + F+ ++ C + + D+ G I +H VK L++
Sbjct: 186 ETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAGLDA 245
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA-C-SHCADYEK-GLSVFK 291
+ F+ + ++ +Y+K + A F+ + + ++I N IA C AD + L ++
Sbjct: 246 DLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCREEAADVAREALGLYS 305
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
E+ + G++P +F+F+SIL AC GKQIH +++ DV +G+AL+++Y+
Sbjct: 306 ELQS-RGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSALIDLYSGS 364
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
G + Y+ F + ++VV W ++I+ + L AL+LF++ G++PD ++
Sbjct: 365 GCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESVRCGLRPDVFAMSSVM 424
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCL----IDLLGRAGKLLEAEEYTKKF 466
AC + + GE + + FT + I + R+G + + T++F
Sbjct: 425 NACASLAVARTGEQI-----QCLAVKSGFNRFTAMGNSFIHMCARSG---DVDAATRRF 475
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 177/375 (47%), Gaps = 17/375 (4%)
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSD--ALLVYGEAFEPNLVSFNALIAGFVEN 179
+HA+ + + F+ N L++ Y ++G + A + E N VS+N +I +
Sbjct: 21 VHAHLARAHPNASLFLRNCLLASYCRLGVGAPLHAARLLDEMPRRNAVSYNLVIVAYSRA 80
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
P F + DRF++A L CS + D+R G +H + V L + F+
Sbjct: 81 GLPALSLATFARARAWARVVDRFTYAAALAACSRALDVRTGKAVHAMVVLGGLGNGLFLS 140
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N++ ++Y++ +GEA + F EE+D +SWN ++ E+ L VF M HG+
Sbjct: 141 NSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVRAGAREETLEVFSLMCR-HGL 199
Query: 300 RPDDFTFASILAAC---------AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
+ F SI+ C + + + +H +++ L+ D+ + +A+++MYAK
Sbjct: 200 GWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYAK 259
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR---LGGSALKLFEQMKATGIKPDSVTF 407
G ++ + LF + NV+ N +IA + AL L+ ++++ G++P +F
Sbjct: 260 RGALTNAVALFKSVPDPNVIVLNAMIAGFCREEAADVAREALGLYSELQSRGMQPSEFSF 319
Query: 408 IGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+L ACN AG G+ + K + D+ + LIDL +G + + + P
Sbjct: 320 SSILRACNLAGEFGFGKQIHGQVLK-HSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLP 378
Query: 468 LGQDPIVLGTLLSAC 482
QD ++ +++S C
Sbjct: 379 -KQDVVIWTSVISGC 392
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 133/294 (45%), Gaps = 16/294 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S SS+L C+ G +H VLK Q DV + + +++LY+ G M + F +
Sbjct: 318 SFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSL 377
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQ---MHLLPNEYIFASAISACAGIQSLVKGQ 120
++++V W+++ISG Q AL F + L P+ + +S ++ACA + G+
Sbjct: 378 PKQDVVIWTSVISGCVQNELFEEALRLFQESVRCGLRPDVFAMSSVMNACASLAVARTGE 437
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QI ++K G+ + +GNS I M + G A + E ++VS++A+I+ +
Sbjct: 438 QIQCLAVKSGFNRFTAMGNSFIHMCARSGDVDAATRRFQEMESRDVVSWSAVISSHAHHG 497
Query: 181 QPEKGFEVFKLMLRQGLL-PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
VF ML + P+ +F L CS + +G+ + + + +
Sbjct: 498 CARDALCVFNEMLDAKVAPPNEITFLSILTACSHGGLVDEGLRYYGI-----MNDEYGLS 552
Query: 240 NTIMALYSKFNLIGEAEK---AFRLIEE----KDLISWNTFIAACSHCADYEKG 286
TI +L+G A + A I + D + W + +A+C D E+G
Sbjct: 553 PTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERG 606
>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
Length = 837
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 191/575 (33%), Positives = 320/575 (55%), Gaps = 5/575 (0%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+SS+L+ CS L+ G +HA VL+ + DV N +++ Y KCG++ + +FD +
Sbjct: 246 LSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLD 305
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQ 121
+N++SW+ MI+G+ Q A+E +M + P+EY +S +++C + +L G+Q
Sbjct: 306 VKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQ 365
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
IH+Y +K +FV N+LI MY K DA V+ ++V +NA+I G+
Sbjct: 366 IHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGY 425
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
EVF+ M + + P +F L + + L+ +H L +K + F +
Sbjct: 426 LCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSA 485
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +YSK + I +A F KD++ WN+ + + E+ ++ ++ RP
Sbjct: 486 LIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRE-RP 544
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
++FTFA++ A + LAS+ HG+Q H +++M L D + NALV+MYAKCG + + K+F
Sbjct: 545 NEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIF 604
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ + ++ WN++I+ +A H AL++FE M + I P+ VTF+ +L+AC+H G V+
Sbjct: 605 SSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHVGFVE 664
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+G ++NSM + YGI P IEH+ ++ LLGRAG+L EA E+ +K + +V +LLSA
Sbjct: 665 DGLQHYNSMAR-YGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMTIRPAALVWRSLLSA 723
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
CR+ +V + + A+ + P + YV+LSN++AS GMWGDV R + +G+ KEP
Sbjct: 724 CRVFGNVELAKHAAEMAISIDPMDSGSYVMLSNIFASKGMWGDVKRLRLKMDVNGVVKEP 783
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
S IEV G F + H + I L L+
Sbjct: 784 GQSWIEVNGEVHIFVSRDKVHDETDLIYLALDELT 818
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 141/488 (28%), Positives = 258/488 (52%), Gaps = 9/488 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+++++LL K++ +H V+ G+Q DV +SN +L+ Y K G + A +FD+
Sbjct: 41 RALANLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDK 100
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP----NEYIFASAISACAGIQSLVK 118
M RNLVSWS+++S + Q G + AL +F + NEYI AS I AC
Sbjct: 101 MPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEP 160
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G Q+H+Y +K G+ +VG SL+ +Y K G A LV+ V++ A+I G+ +
Sbjct: 161 GSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTK 220
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ + E ++F LM+ ++PD++ + L CSV L+ G +H ++ + + +
Sbjct: 221 SGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVST 280
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA-CSHCADYEKGLSVFKEMSNDH 297
N ++ Y+K + + F ++ K++ISW T IA + D+E + + EM
Sbjct: 281 YNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWE-AVELVGEMFR-M 338
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G +PD++ +S+L +C + ++QHG+QIH+++I++ L D V NAL++MY+KC + +
Sbjct: 339 GWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDA 398
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++F+ + +VV +N +I ++ AL++F++M+ + P +TF+ LL
Sbjct: 399 KRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAAL 458
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
++ + + K YG S D + LID+ + + +A Y + +D +V +
Sbjct: 459 LCLQLSKQIHGLIIK-YGFSLDKFTSSALIDVYSKCSCIRDA-RYVFEGTTNKDIVVWNS 516
Query: 478 LLSACRLR 485
L S L+
Sbjct: 517 LFSGYNLQ 524
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 3/130 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++L S +L G H V+KMG++ D ++N ++++YAKCG + A K+F
Sbjct: 548 TFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSSS 607
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
++ W++MIS + Q G+ AL F M ++ PN F S +SAC+ + + G
Sbjct: 608 VWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHVGFVEDGL 667
Query: 121 QIHAYSLKFG 130
Q + ++G
Sbjct: 668 QHYNSMARYG 677
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 204/576 (35%), Positives = 317/576 (55%), Gaps = 7/576 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +L C + G +HA VL+ G +V V N ++ +YAKCG ++ ARKVFD M
Sbjct: 191 TFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSM 250
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ + +SW+AMI+GH + GE LE F M + PN S A + + +
Sbjct: 251 TVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAK 310
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H ++K G+A NSLI MY +G A V+ + +++ A+I+G+ +N
Sbjct: 311 EMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNG 370
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
P+K EV+ LM + PD + A L C+ L G+ LH L S V N
Sbjct: 371 FPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTN 430
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA-CSHCADYEKGLSVFKEMSNDHGV 299
I+ +Y+K I +A + F+ + EKD++SW++ IA C + ++E L F+ M D V
Sbjct: 431 AILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFE-ALYYFRHMLAD--V 487
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+P+ TF + LAACA +++ GK+IHAH++R + + + NAL+++Y KCG ++
Sbjct: 488 KPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWA 547
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
F ++VVSWN +IA H G +AL F QM G PD VTF+ LL AC+ G+
Sbjct: 548 QFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGM 607
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V EG F+SM + Y I P+++H+ C++DLL RAG+L EA + + P+ D V G LL
Sbjct: 608 VSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALL 667
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
+ CR+ R V +GE AK + L+P +VLL +LYA +W +A RK +++ GL
Sbjct: 668 NGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKTMREKGLDH 727
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ S +EV+G F + SH +I EIN +L+ +
Sbjct: 728 DSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGI 763
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 206/406 (50%), Gaps = 7/406 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+L C +A++ G+ A + + N +L++ + G+ A +VF +M ER
Sbjct: 93 ALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGETWHAWRVFAKMPER 152
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
++ SW+ M+ G+ ++G AL+ + +M + P+ Y F + +C G+ G+++H
Sbjct: 153 DVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVH 212
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A+ L+FG+ V N+L++MY K G A V+ + +S+NA+IAG EN +
Sbjct: 213 AHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFENGECN 272
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
G E+F ML + P+ + + +D+ +H L VK + N+++
Sbjct: 273 AGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLI 332
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+ ++ +A F ++ +D ++W I+ +K L V+ M ++ V PDD
Sbjct: 333 QMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEVNN-VSPDD 391
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T AS LAACA L S+ G ++H + V NA++ MYAK I + ++F
Sbjct: 392 ITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKC 451
Query: 364 MLHRNVVSWNTIIAAHA-NHRLGGSALKLFEQMKATGIKPDSVTFI 408
M ++VVSW+++IA NHR AL F M A +KP+SVTFI
Sbjct: 452 MHEKDVVSWSSMIAGFCFNHR-NFEALYYFRHMLAD-VKPNSVTFI 495
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 97/176 (55%), Gaps = 1/176 (0%)
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+GN ++++ +F A + F + E+D+ SWN + ++ L ++ M
Sbjct: 125 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWA- 183
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
GVRPD +TF +L +C G+ + G+++HAH++R ++V V NAL+ MYAKCG + +
Sbjct: 184 GVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAA 243
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
K+F+ M + +SWN +IA H + + L+LF M ++P+ +T + A
Sbjct: 244 RKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVA 299
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 191/576 (33%), Positives = 336/576 (58%), Gaps = 5/576 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+++LL ++ ++ + +H+ V+K+G ++VSN +L+ Y K + LA ++F+++
Sbjct: 200 SLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDI 259
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
ER+ V+++A+++G+ + G + A+ F +M + P E+ FA+ ++A + + GQ
Sbjct: 260 PERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQ 319
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H + +K + FV N+L+ Y K +A ++ E E + +S+N L+ + N
Sbjct: 320 QVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNG 379
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ ++ E+FK + G F FA L I ++S +L G +H T+ S VGN
Sbjct: 380 RVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGN 439
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +Y+K GEA + F + + + W I++ +E GL +F EM +
Sbjct: 440 SLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAK-IG 498
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D T+ASI+ ACA LAS+ GKQ+H+H+I +V G+ALV+MYAKCG I + ++
Sbjct: 499 ADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQM 558
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F EM RN VSWN +I+A+A + G L+LFE+M +G++PDSV+ + +L AC+H GLV
Sbjct: 559 FQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLV 618
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+EG YF+SM + Y + P EH+ ID+L R G+ EAE+ + P D I+ ++L+
Sbjct: 619 EEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLN 678
Query: 481 ACRLRRDVVIGERLAKQLFHLQP-TTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
+C + ++ + ++ A QLF+++ +PYV +SN+YA+ G W +V +K +++ G+KK
Sbjct: 679 SCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKK 738
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P+YS +E++ FT + +H ++ EI L L
Sbjct: 739 VPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDEL 774
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 131/477 (27%), Positives = 238/477 (49%), Gaps = 8/477 (1%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH 95
++ +N ++ Y K G + AR +FD M +R V+W+ +I G+ Q + A F +M
Sbjct: 131 NIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMG 190
Query: 96 ---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSS 152
+ P+ A+ +S S+ + +Q+H++ +K GY S V NSL+ Y K
Sbjct: 191 RHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLG 250
Query: 153 DALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
A ++ + E + V+FNAL+ G+ + + +F M G P F+FA L
Sbjct: 251 LAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGI 310
Query: 213 VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNT 272
+D+ G +H VKC N FV N ++ YSK + + EA K F + E D IS+N
Sbjct: 311 QLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNV 370
Query: 273 FIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
+ + ++ L +FKE+ G +F FA++L+ A ++ G+QIH+ I
Sbjct: 371 LVTCYAWNGRVKESLELFKELQFT-GFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVT 429
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
++ VGN+LV+MYAKCG + ++F+++ ++ V W +I+++ L LKLF
Sbjct: 430 DAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLF 489
Query: 393 EQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
+M+ I D+ T+ ++ AC + G+ + + + IS ++ + L+D+ +
Sbjct: 490 VEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYIS-NVFSGSALVDMYAK 548
Query: 453 AGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH--LQPTTTS 507
G + +A + ++ P+ ++ + L+SA D RL +++ LQP + S
Sbjct: 549 CGSIKDALQMFQEMPV-RNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVS 604
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 116/270 (42%), Gaps = 49/270 (18%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +S++ C+ +L G LH+ ++ G +V + ++++YAKCG + A ++F
Sbjct: 501 AATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQ 560
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
EM RN VSW+A+IS + Q G+ L F +M L P+ S + AC+ + +
Sbjct: 561 EMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEE 620
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMY----MKVGYSSD-ALLVYGEAFEPNLVSFNALI 173
G Q +S+ +Y K Y+S +L G F+
Sbjct: 621 GLQYF---------------DSMTRIYKLVPKKEHYASTIDMLCRGGRFD---------- 655
Query: 174 AGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSV--SNDLRKGMILHCLTVKCK 231
E KLM + PD ++ L C + + +L K +K
Sbjct: 656 -------------EAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVL 702
Query: 232 LESNPFVG-NTIMALYSKFNLIGEAEKAFR 260
++ P+V + I A +++ +G+ +KA R
Sbjct: 703 RDAAPYVTMSNIYAAAGEWDNVGKVKKAMR 732
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 14/188 (7%)
Query: 324 QIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR 383
+ A +I+ N + N LV + + G ++ + KLF+EM H+N+ S NT+I +
Sbjct: 87 HVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSG 146
Query: 384 LGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF 443
A LF+ M + +VT+ L+ +E F M + +GI PD
Sbjct: 147 NLSEARTLFDSM----FQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGR-HGIDPDHVSL 201
Query: 444 TCLIDLLGRAGKLLEAEE-YTKKFPLGQDP--IVLGTLL-SACRLRRDVVIGERLAKQLF 499
L+ + E + ++ LG D +V +LL S C+ R +G LA QLF
Sbjct: 202 ATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRS---LG--LAFQLF 256
Query: 500 HLQPTTTS 507
+ P S
Sbjct: 257 NDIPERDS 264
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 210/638 (32%), Positives = 327/638 (51%), Gaps = 74/638 (11%)
Query: 13 SKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWS 72
S T +L Q HA +LK G+ D ++ +L+ YA A V D + E N+ S+S
Sbjct: 24 STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFS 83
Query: 73 AMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKF 129
+I + + AL FSQM L+P+ + SA+ ACAG+ +L +Q+H +
Sbjct: 84 TLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVS 143
Query: 130 GYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVF 189
G+ S SFV +SL+ MY+K DA V+ FEP++VS++AL+A + ++ +F
Sbjct: 144 GFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLF 203
Query: 190 KLMLRQGLLPDRFSFAG-----------------------------GLEICSVS------ 214
M G+ P+ S+ G G I SV
Sbjct: 204 SEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDL 263
Query: 215 NDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI---------------------- 252
DL G+++H +K L S+ V + ++ +Y K +
Sbjct: 264 EDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFI 323
Query: 253 ------GEAEKAFRLIE-------EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
G+ E + RL E +++SW + IA CS + L +F+EM GV
Sbjct: 324 FGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREM-QIAGV 382
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+P+ T +L AC +A++ HGK H +R ++ DV VG+AL++MYAKCG I S
Sbjct: 383 KPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRI 442
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
F+ + +N+V WN +IA +A H A+++F+ M+ +G KPD ++F +L+AC+ +GL
Sbjct: 443 CFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGL 502
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
+EG YFNSM YGI +EH+ C++ LL RAGKL +A ++ P+ D V G LL
Sbjct: 503 TEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALL 562
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
S+CR+ +V +GE A++LF L+P+ Y+LLSN+YAS GMW +V R M+K+ GL+K
Sbjct: 563 SSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRK 622
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
P S IEV+ + SH ++ +I L LS+
Sbjct: 623 NPGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSM 660
>gi|225428280|ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Vitis vinifera]
Length = 742
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 192/573 (33%), Positives = 318/573 (55%), Gaps = 8/573 (1%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
+H C A+++G+ +H +++ G V N +L++YA M A ++FDEM ER++
Sbjct: 157 IHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCERDV 215
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
+SWS MI G+ Q GE +AL+ F +M + + S + ACA + G+ +H
Sbjct: 216 ISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHG 275
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ G FVGNS+I MY K A + E N VS+N++I+G V ++ +
Sbjct: 276 VVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSE 335
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
+F M + G D + L+ C D + +H + ++ E N FV N+++
Sbjct: 336 ALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLID 395
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
YSK +LI A K F ++ KD +SW+ IA +HC ++ +++F+EM N +P+
Sbjct: 396 AYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEM-NQAQEKPNGV 454
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T S+L A + A ++ K H IR L +V VG A+++MYAKCG I S K F+++
Sbjct: 455 TILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQI 514
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+N+VSW +IAA + L AL L +MK G+KP+ VT + +L+AC+H GLV+EG
Sbjct: 515 PEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGL 574
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP--LGQDPIVLGTLLSAC 482
++F +M + +G+ P +EH++C++D+L RAGKL A +K P + + G LLSAC
Sbjct: 575 SFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSAC 634
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
R + +G A ++ L+P +++ Y L S++YA+ G+W D A R ++K G++
Sbjct: 635 RSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGLWADAARMRWLVKARGVRVVAG 694
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
YS++ V+ +F + SH + GEI +++ L
Sbjct: 695 YSLVHVEDKAWRFVAGDESHPRAGEIWGVVEQL 727
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 144/517 (27%), Positives = 264/517 (51%), Gaps = 15/517 (2%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+ S+L CS + ++ G S+HA++LK G N VL+ Y K G + A VFD M
Sbjct: 53 VHSILKACS-SLPVRHGKSIHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMR 111
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQ 121
R+ VSW+ MI GH G L +F Q ++ PN AI AC + ++ +G +
Sbjct: 112 SRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLK 171
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H Y ++ G+ I V NSL+SMY A ++ E E +++S++ +I G+V+ +
Sbjct: 172 MHGYIIRSGFLDIPSVQNSLLSMYADNDMER-AEELFDEMCERDVISWSVMIGGYVQTGE 230
Query: 182 PEKGFEVFKLMLRQGLLP-DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ ++F M + D + L+ C+ + D+ G +H + + L+ + FVGN
Sbjct: 231 AKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGN 290
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+I+ +YSK + A KAF + ++ +SWN+ I+ + + LS+F M G R
Sbjct: 291 SIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGK-AGFR 349
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D+ T ++L +C K IH+ +IR + V N+L++ Y+KC LI ++KL
Sbjct: 350 ADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKL 409
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+ + ++ VSW+ +IA + A+ LF++M KP+ VT + LL A + + +
Sbjct: 410 FDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADL 469
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
K + + + + G++ ++ T ++D+ + G++ + + + P ++ + G +++
Sbjct: 470 KRSK-WAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIP-EKNIVSWGAMIA 527
Query: 481 AC---RLRRDVVIGERLAKQLFH-LQPTTTSPYVLLS 513
AC L RD + L++ H L+P + +LS
Sbjct: 528 ACGMNGLARDAL--ALLSEMKLHGLKPNVVTTLSVLS 562
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 202/406 (49%), Gaps = 22/406 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+L C+ T + G S+H V+ G+ D+ V N ++++Y+KC A K F+EM
Sbjct: 253 TMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEM 312
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
RN VSW+++ISG + +H AL F M +E + + +C + +
Sbjct: 313 PCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCK 372
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IH+ +++GY FV NSLI Y K A ++ + VS++A+IAGF
Sbjct: 373 FIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCG 432
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+P++ +F+ M + P+ + LE SVS DL++ H + ++ L + VG
Sbjct: 433 KPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGT 492
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
I+ +Y+K IG + KAF I EK+++SW IAAC L++ EM HG++
Sbjct: 493 AILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKL-HGLK 551
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNAL------VNMYAKCGLI 354
P+ T S+L+AC+ V+ G +++ QD GV L V+M ++ G +
Sbjct: 552 PNVVTTLSVLSACSHGGLVEEGLSFFENMV-----QDHGVEPGLEHYSCMVDMLSRAGKL 606
Query: 355 SCSYKLFNEMLHR---NVVSWNTIIAA---HANHRLG-GSALKLFE 393
+ + L +M R W +++A N RLG G+A ++ E
Sbjct: 607 NSAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAFRVLE 652
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 3/159 (1%)
Query: 267 LISWNTFIAACSH--CADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ 324
L +WN I ++ D + S + +M D SIL AC+ L V+HGK
Sbjct: 12 LPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKACSSLP-VRHGKS 70
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
IHA L++ + GN++++ Y K G + + +F+ M R+ VSWN +I H +
Sbjct: 71 IHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGA 130
Query: 385 GGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
L F Q + +P+ T + + AC G ++EG
Sbjct: 131 SDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEG 169
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 212/649 (32%), Positives = 332/649 (51%), Gaps = 76/649 (11%)
Query: 4 SISSLLHHC--SKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
S+ + +C S T +L Q HA +LK G+ D ++ +L+ YA A V D
Sbjct: 13 SVQHTIFNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLD 72
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
+ E N+ S+S +I + + AL FSQM L+P+ + SA+ ACAG+ +L
Sbjct: 73 LVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKP 132
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+Q+H + G+ S SFV +SL+ MY+K DA V+ FEP++VS++AL+A +
Sbjct: 133 ARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYAR 192
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAG-----------------------------GLE 209
++ +F M G+ P+ S+ G G
Sbjct: 193 QGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTT 252
Query: 210 ICSVS------NDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI----------- 252
I SV DL G+++H +K L S+ V + ++ +Y K +
Sbjct: 253 ISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMD 312
Query: 253 -----------------GEAEKAFRLIE-------EKDLISWNTFIAACSHCADYEKGLS 288
G+ E + RL E +++SW + IA CS + L
Sbjct: 313 HMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALE 372
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMY 348
+F+EM GV+P+ T +L AC +A++ HGK H +R ++ DV VG+AL++MY
Sbjct: 373 LFREM-QIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMY 431
Query: 349 AKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
AKCG I S F+ + +N+V WN +IA +A H A+++F+ M+ +G KPD ++F
Sbjct: 432 AKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFT 491
Query: 409 GLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
+L+AC+ +GL +EG YFNSM YGI +EH+ C++ LL RAGKL +A ++ P+
Sbjct: 492 CVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPV 551
Query: 469 GQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGA 528
D V G LLS+CR+ +V +GE A++LF L+P+ Y+LLSN+YAS GMW +V
Sbjct: 552 NPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRV 611
Query: 529 RKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
R M+K+ GL+K P S IEV+ + SH ++ +I L LS+
Sbjct: 612 RDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSM 660
>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
Length = 1021
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 193/576 (33%), Positives = 328/576 (56%), Gaps = 7/576 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C +L G +H +K G+ D+ V+N +L++Y+K G + +A+ +F + +
Sbjct: 430 SVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVK 489
Query: 67 NLVSWSAMISG---HHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
+ VSW+A+I G + + GE + L+ + +E FA+AI+AC+ I ++ G+QIH
Sbjct: 490 DSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIH 549
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ S+K+ S VG+SLI +Y K G + V ++V NALI G V+N + +
Sbjct: 550 SASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNRED 609
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK-LESNPFVGNTI 242
+ E+F+ +L+ G P F+F L C+ G +HC T+K L + +G ++
Sbjct: 610 EAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISL 669
Query: 243 MALYSKFNLIGEAEKAFRLI-EEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+ +Y K L+ +A K + + K+L+ W I+ + + L +F M + + VR
Sbjct: 670 VGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRS-YDVRS 728
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D+ TF S+L AC+ +A++ GK+IH +++ +AL++MY+KCG + S+++F
Sbjct: 729 DEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIF 788
Query: 362 NEMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
E+ +R N++ WN++I A + AL LF++M+ + IKPD VT +G+L AC+HAGL+
Sbjct: 789 KELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIACSHAGLI 848
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG +F+SM + YGI P ++H+ CLIDLLGR G L +A+E + P D ++ T L+
Sbjct: 849 SEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQKAQEVIDQLPFRADGVIWATYLA 908
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC++ +D G+ AK+L ++P ++S YV LS+L+A+ G W + AR+ +++ G+ K
Sbjct: 909 ACQMHKDEERGKVAAKKLVEMEPQSSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKF 968
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
P S I V F V + H I ML L+
Sbjct: 969 PGCSWITVGNKQSVFVVQDTHHPDALSIYKMLDDLT 1004
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 126/401 (31%), Positives = 225/401 (56%), Gaps = 4/401 (0%)
Query: 19 QQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGH 78
QQ ++L + + KMG PD + +++ A G++ AR + + + V+W+A+I+ +
Sbjct: 240 QQALALFSRMEKMGSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASY 299
Query: 79 HQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS 135
Q+G + M L+P FAS +SA A + + +G+QIHA ++K G +
Sbjct: 300 SQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANV 359
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
FVG+SLI++Y+K G SDA V+ + E N+V +NA++ GFV+N+ E+ ++F+ M R
Sbjct: 360 FVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRA 419
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
L D F+F L C L G +HC+T+K ++++ FV N ++ +YSK I A
Sbjct: 420 DLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVA 479
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
+ F LI KD +SWN I +H + + +++ K M +G+ D+ +FA+ + AC+
Sbjct: 480 KALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKF-YGIALDEVSFATAINACSN 538
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
+ +++ GKQIH+ I+ + + VG++L+++Y+K G + S K+ + ++V N +
Sbjct: 539 IWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINAL 598
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
I + A++LF+Q+ G KP + TF +L+ C
Sbjct: 599 ITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTR 639
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 134/481 (27%), Positives = 251/481 (52%), Gaps = 7/481 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L + A +G +HA +K G+ +V V + ++NLY K G + A+KVFD
Sbjct: 326 TFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFS 385
Query: 64 SERNLVSWSAMISGHHQ---AGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
+E+N+V W+A++ G Q E + ++ + L +++ F S + AC + SL G+
Sbjct: 386 TEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGR 445
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H ++K G + FV N+++ MY K+G A ++ + VS+NALI G N+
Sbjct: 446 QVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNE 505
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ + + K M G+ D SFA + CS + G +H ++K + SN VG+
Sbjct: 506 EEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGS 565
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ LYSKF + + K ++ ++ N I ++ + +F+++ D G +
Sbjct: 566 SLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKD-GFK 624
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCSYK 359
P +FTF SIL+ C S GKQ+H + ++ LNQD +G +LV +Y KC L+ + K
Sbjct: 625 PSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANK 684
Query: 360 LFNEML-HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
L E+ H+N+V W I+ +A + +L +F +M++ ++ D TF +L AC+
Sbjct: 685 LLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMA 744
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
+ +G+ + K+ +S + + L+D+ + G ++ + E K+ Q+ + ++
Sbjct: 745 ALTDGKEIHGLIVKSGFVSYETAT-SALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSM 803
Query: 479 L 479
+
Sbjct: 804 I 804
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 130/452 (28%), Positives = 228/452 (50%), Gaps = 34/452 (7%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
I+ +L CS+ AL+ G +H VLK G V ++++YAKCG++ AR++FD ++
Sbjct: 160 IAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIA 219
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHA 124
+ + W++MI+G+H+ G + AL FS+M
Sbjct: 220 CPDTICWTSMIAGYHRVGRYQQALALFSRME----------------------------- 250
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
K G ++IS +G DA + + V++NA+IA + ++ +
Sbjct: 251 ---KMGSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSE 307
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
F ++K M +QGL+P R +FA L + +G +H VK L++N FVG++++
Sbjct: 308 VFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLIN 367
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
LY K I +A+K F EK+++ WN + E+ + +F+ M + DDF
Sbjct: 368 LYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRR-ADLEADDF 426
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
TF S+L AC L S+ G+Q+H I+ ++ D+ V NA+++MY+K G I + LF+ +
Sbjct: 427 TFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLI 486
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
++ VSWN +I A++ G A+ + ++MK GI D V+F + AC++ ++ G+
Sbjct: 487 PVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGK 546
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+S Y + + + LIDL + G +
Sbjct: 547 Q-IHSASIKYNVCSNHAVGSSLIDLYSKFGDV 577
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 193/397 (48%), Gaps = 42/397 (10%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD--EMSERNLVSWSAMISGHHQA 81
LHA +L++G+ + + +++LY + G++ A + + + + S+++S H ++
Sbjct: 75 LHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSCHARS 134
Query: 82 GEHLLALEFFSQMHL----LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
G L+ F ++ P+++ A +SAC+ + +L G+Q+H LK G+ S F
Sbjct: 135 GSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFC 194
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
L+ MY K G DA ++ P+ + + ++IAG+ + ++ +F M + G
Sbjct: 195 QAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGS 254
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
+PD+ + C+T+ L S +G+A
Sbjct: 255 VPDQVT---------------------CVTIISTLAS--------------MGRLGDART 279
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
+ I ++WN IA+ S + ++K+M G+ P TFASIL+A A +
Sbjct: 280 LLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKK-QGLMPTRSTFASILSAAANMT 338
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
+ G+QIHA ++ L+ +V VG++L+N+Y K G IS + K+F+ +N+V WN I+
Sbjct: 339 AFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILY 398
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ L +++F+ M+ ++ D TF+ +L AC
Sbjct: 399 GFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGAC 435
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 6/220 (2%)
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHC- 280
+LH ++ L +G+ ++ LY + +G A +A S H
Sbjct: 74 VLHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSCHAR 133
Query: 281 -ADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG 339
L F+ + G PD F A +L+AC+ L +++HG+Q+H +++ V
Sbjct: 134 SGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVF 193
Query: 340 VGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG--GSALKLFEQMKA 397
LV+MYAKCG + + ++F+ + + + W ++IA + HR+G AL LF +M+
Sbjct: 194 CQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGY--HRVGRYQQALALFSRMEK 251
Query: 398 TGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
G PD VT + +++ G + + + T ++
Sbjct: 252 MGSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVA 291
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L CS+ AL G +H ++K G ++ ++++Y+KCG +I + ++F E+
Sbjct: 732 TFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKEL 791
Query: 64 SER-NLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACA 111
R N++ W++MI G + G E LL + + + P++ + AC+
Sbjct: 792 KNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIACS 843
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 194/540 (35%), Positives = 306/540 (56%), Gaps = 23/540 (4%)
Query: 57 RKVFDEMSERNLV-SWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAG 112
R +F + ++ V SW+++I+ ++G+ L AL FS M L PN F I +C+
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
+ L G+QIH + FGY S FV ++LI MY K GY +DA ++ E E N+VS+ ++
Sbjct: 99 LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSM 158
Query: 173 IAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMIL--------- 223
I+G+V+N++ + +FK + LL D + + + + + G ++
Sbjct: 159 ISGYVQNERAREAVFLFK----EFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVK 214
Query: 224 ------HCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC 277
H L VK E VGNT+M Y+K I + K F +EE D+ SWN+ IA
Sbjct: 215 SVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVY 274
Query: 278 SHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD 337
+ + S+F +M VR + T +++L ACA ++Q GK IH +++M L +
Sbjct: 275 AQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDN 334
Query: 338 VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA 397
+ VG ++V+MY KCG + + K F+ + +NV SW ++A + H G A+K+F +M
Sbjct: 335 LVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIR 394
Query: 398 TGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLL 457
GIKP+ +TF+ +L AC+HAGL+KEG +FN M+ + + P IEH++C++DLLGRAG L
Sbjct: 395 CGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLK 454
Query: 458 EAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYA 517
EA ++ + D IV G+LL ACR+ ++V +GE A++LF L P+ YVLLSN+YA
Sbjct: 455 EAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYA 514
Query: 518 SDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
G W DV R ++K+ GL K P YS++E +G F V + H + +I L L++
Sbjct: 515 DAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNV 574
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 204/406 (50%), Gaps = 28/406 (6%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
CS L G +H G D+ V++ ++++Y+KCG + ARK+FDE+ ERN+VSW
Sbjct: 96 CSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSW 155
Query: 72 SAMISGHHQAGEHLLALEFFSQMHLLP--------------NEYIFASAISACAGIQSLV 117
++MISG+ Q A+ F + L+ + + ISACA +
Sbjct: 156 TSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKS 215
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+ +H ++K G+ VGN+L+ Y K G S + V+ E ++ S+N+LIA +
Sbjct: 216 VTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYA 275
Query: 178 ENQQPEKGFEVFKLMLRQGLLP-DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
+N + F +F M+++G + + + + L C+ S L+ G +H VK +LE N
Sbjct: 276 QNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNL 335
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
VG +I+ +Y K + A KAF ++ K++ SW +A ++ + VF EM
Sbjct: 336 VVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIR- 394
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG----NALVNMYAKCG 352
G++P+ TF S+LAAC+ ++ G +M+ DV G + +V++ + G
Sbjct: 395 CGIKPNYITFVSVLAACSHAGLLKEGWH---WFNKMKCEFDVEPGIEHYSCMVDLLGRAG 451
Query: 353 LISCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGG-SALKLFE 393
+ +Y L EM + + + W +++ A H N LG SA KLF+
Sbjct: 452 YLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFK 497
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++S++L C+ + ALQ G +H V+KM ++ +++V ++++Y KCG++ +ARK FD
Sbjct: 300 AVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFD 359
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
+ +N+ SW+ M++G+ G A++ F +M + PN F S ++AC+
Sbjct: 360 RLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACS 412
>gi|302763819|ref|XP_002965331.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
gi|300167564|gb|EFJ34169.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
Length = 806
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 185/524 (35%), Positives = 297/524 (56%), Gaps = 10/524 (1%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L+ GI +H + V+V N ++++Y +CGK+ A +VF +M RN+VSW++MI+
Sbjct: 265 LRGGIQIHDKIQSEIHGTRVLVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAA 324
Query: 78 HHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQS---LVKGQQIHAYSLKFGY 131
Q G + +++ F M + PNE +AS +SA A + L +G++IH+ G
Sbjct: 325 VAQTGHYSFSVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGI 384
Query: 132 ASISFVGNSLISMYMKVGYSSDALLVYGEAFE--PNLVSFNALIAGFVENQQPEKGFEVF 189
+ V NSLI+MY + G ++A V+ E +VSF +I+ + N P + E+F
Sbjct: 385 DADPIVQNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMISAYAHNGHPRQALEIF 444
Query: 190 KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES-NPFVGNTIMALYSK 248
+ M +G+ P+ +FA L C DL G +H ++ L+S +PF N+++ +Y+K
Sbjct: 445 REMTARGVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAK 504
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
+G A + F ++ KDL++W T IAA + L ++ M G+ PD T ++
Sbjct: 505 CGDLGFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQS-GIHPDIATLST 563
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
+L ACA L + G++IH +R +L QD NAL MYAKCG + + +L+ +
Sbjct: 564 LLVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSD 623
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
V +W +++AAH+ L AL+L+ +M++ G++P+ VTFI +L +C+ AGLV EG +F+
Sbjct: 624 VATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFH 683
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDV 488
S+ YG P EHF C++D+LGRAGKL +AEE P D I +LLS+C+L D
Sbjct: 684 SITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLSSCKLHTDA 743
Query: 489 VIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKML 532
IG R A+ L L P +TS +V LS +YA+ G D+ ++ L
Sbjct: 744 EIGTRAAECLLELDPESTSQFVALSQIYAAAGRNSDIDEIKREL 787
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 144/477 (30%), Positives = 246/477 (51%), Gaps = 11/477 (2%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C + K L QG S+H V G + + + ++ +YA+CG++ LA FD+ E W
Sbjct: 161 CGRIKDLAQGRSIHYRV-ATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPW 219
Query: 72 SAMISGHHQAGEHLLALEFFSQMHLLP-NEYIFASAISACAGIQSLVKGQQIHAYSLKFG 130
+A++S AG H A+E F QM ++ A A+ ACA L G QIH
Sbjct: 220 NAIMSALAGAGHHRRAIELFFQMEQHQCSDRSCAIALGACAAAGHLRGGIQIHDKIQSEI 279
Query: 131 YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFK 190
+ + V N+LISMY++ G +AL V+ + N+VS+ ++IA + ++F
Sbjct: 280 HGTRVLVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQTGHYSFSVKLFD 339
Query: 191 LMLRQGLLPDRFSFAGGLE-ICSVSND--LRKGMILHCLTVKCKLESNPFVGNTIMALYS 247
M+ +G+ P+ ++A + I + D L +G +H ++++P V N+++ +Y+
Sbjct: 340 GMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYA 399
Query: 248 KFNLIGEAEKAFRLIEE--KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFT 305
+ L+ EA + F I E K ++S+ T I+A +H + L +F+EM+ GV P++ T
Sbjct: 400 RSGLLAEAREVFDSILENSKTVVSFTTMISAYAHNGHPRQALEIFREMTA-RGVAPNEIT 458
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLN-QDVGVGNALVNMYAKCGLISCSYKLFNEM 364
FA++LAAC + + G IH +I L+ D N+LV+MYAKCG + + ++F M
Sbjct: 459 FATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETM 518
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+++V+W TIIAA+ +AL L+++M +GI PD T LL AC + G + GE
Sbjct: 519 KTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGE 578
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
++ + D L + + G L +A ++ G D ++L+A
Sbjct: 579 KIHRQALRS-KLEQDAHFQNALAAMYAKCGSLEKATRLYRRCR-GSDVATWTSMLAA 633
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 138/534 (25%), Positives = 255/534 (47%), Gaps = 46/534 (8%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
++LL C +AL G +HA ++ + + ++ V +YA+C A +FD M +
Sbjct: 54 ANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMPD 113
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQI 122
R W+ ++ A LE + +M + P+ F AI AC I+ L +G+ I
Sbjct: 114 RRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRSI 173
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H Y + G S + ++L++MY + G A+ + + E +NA+++
Sbjct: 174 H-YRVATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHH 232
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
+ E+F + Q DR S A L C+ + LR G+ +H + V N +
Sbjct: 233 RRAIELF-FQMEQHQCSDR-SCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLVLNAL 290
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+++Y + + EA + F + ++++SW + IAA + Y + +F M + G+ P+
Sbjct: 291 ISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQTGHYSFSVKLFDGMIAE-GINPN 349
Query: 303 DFTFASILAACAGL---ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+ T+AS+++A A L A + G++IH+ + ++ D V N+L+NMYA+ GL++ + +
Sbjct: 350 EKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEARE 409
Query: 360 LFNEMLH--RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+F+ +L + VVS+ T+I+A+A++ AL++F +M A G+ P+ +TF +L AC
Sbjct: 410 VFDSILENSKTVVSFTTMISAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAI 469
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL------LGRAGKLLEA------------ 459
G + G M ++ S D + L+D+ LG A ++ E
Sbjct: 470 GDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTI 529
Query: 460 --------------EEYTKKFPLGQDPIV--LGTLLSACRLRRDVVIGERLAKQ 497
+ Y + G P + L TLL AC D+ +GE++ +Q
Sbjct: 530 IAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQ 583
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 168/363 (46%), Gaps = 8/363 (2%)
Query: 102 IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA 161
++A+ + C ++L G+++HA+ + A + +G + MY + A+ ++
Sbjct: 52 LYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAM 111
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
+ +N L+ F+ +P E+++ M + P F + C DL +G
Sbjct: 112 PDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGR 171
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
+H V N + + ++ +Y++ I A AF E WN ++A +
Sbjct: 172 SIH-YRVATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAG 230
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
+ + + +F +M D + A L ACA ++ G QIH + V V
Sbjct: 231 HHRRAIELFFQMEQHQC---SDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLVL 287
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
NAL++MY +CG + + ++F +M HRNVVSW ++IAA A ++KLF+ M A GI
Sbjct: 288 NALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQTGHYSFSVKLFDGMIAEGIN 347
Query: 402 PDSVTFIGLLTACNHAG---LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLE 458
P+ T+ +++A H G ++ G + + + GI D LI++ R+G L E
Sbjct: 348 PNEKTYASVVSAIAHLGRDAILDRGRKIHSQITAS-GIDADPIVQNSLINMYARSGLLAE 406
Query: 459 AEE 461
A E
Sbjct: 407 ARE 409
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 5/186 (2%)
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
+A++L C ++ HG+++HAH++ RL ++ +G + MYA+C + LF+ M
Sbjct: 53 YANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMP 112
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
R WN ++ L+L+ +M +P + F+ + AC + +G +
Sbjct: 113 DRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRS 172
Query: 426 YFNSMEKTYGISPDIEHFTCLIDLLGRAGKL-LEAEEYTKKFPLGQDP--IVLGTLLSAC 482
+ GI+ I+ + L+ + + G++ L + LG P ++ L A
Sbjct: 173 IHYRVATGRGINSSIQ--SALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAG 230
Query: 483 RLRRDV 488
RR +
Sbjct: 231 HHRRAI 236
>gi|115444451|ref|NP_001046005.1| Os02g0167200 [Oryza sativa Japonica Group]
gi|113535536|dbj|BAF07919.1| Os02g0167200, partial [Oryza sativa Japonica Group]
Length = 526
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 188/542 (34%), Positives = 309/542 (57%), Gaps = 39/542 (7%)
Query: 30 KMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALE 89
+ G D V N ++++Y KC +M A KVF+ + +VSW+ +I+G Q G A+E
Sbjct: 1 RKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVE 60
Query: 90 FFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYM 146
S M PNE +++ +++C +K + +H S +M+
Sbjct: 61 VLSLMQEAGFEPNEVTYSNLLASC------IKARDVH----------------SARAMFD 98
Query: 147 KVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAG 206
K+ P++ ++N L++G+ + +Q + E+F+ M Q + PDR + A
Sbjct: 99 KIS-------------RPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAV 145
Query: 207 GLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKD 266
L CS L G +H +V+ L ++ FV + ++ +YSK IG A F + E+D
Sbjct: 146 ILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERD 205
Query: 267 LISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
++ WN+ I+ + + ++ FK+M ++G+ P + ++AS++ +C+ L+S+ HG+QIH
Sbjct: 206 VVCWNSIISGLTIHSLNKEAFDFFKQM-RENGIMPTESSYASMINSCSRLSSIPHGRQIH 264
Query: 327 AHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGG 386
A +++ +Q+V VG+AL++MYAKCG + + F+ M+ +N+V+WN +I +A + LG
Sbjct: 265 AQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGD 324
Query: 387 SALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCL 446
A++LFE M T KPD+VTFI +LT C+H+GLV + A+FNSME +YGI P EH+TCL
Sbjct: 325 KAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCL 384
Query: 447 IDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTT 506
ID LGRAG+ +E E K P DPI+ LL+AC + + +G+ A+ LF + P
Sbjct: 385 IDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNP 444
Query: 507 SPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIG 566
SPYVLLSN+YAS G GD + R ++ + G+ K YS I+ + F VA+ + G
Sbjct: 445 SPYVLLSNIYASLGRHGDASAVRALMSNRGVVKGRGYSWIDQKDGVRAFMVADDLGADGG 504
Query: 567 EI 568
E+
Sbjct: 505 EL 506
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 153/288 (53%), Gaps = 23/288 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++ +L CSK L G +H+A ++ + D+ V++ ++++Y+KCG++ +AR +F++M
Sbjct: 142 TLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKM 201
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+ER++V W+++ISG + A +FF QM ++P E +AS I++C+ + S+ G+
Sbjct: 202 TERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGR 261
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIHA +K GY +VG++LI MY K G DA L + N+V++N +I G+ +N
Sbjct: 262 QIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNG 321
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+K E+F+ ML PD +F L CS S + K M N +
Sbjct: 322 LGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFF------NSMENSY--- 372
Query: 241 TIMALYSKFN-LIGEAEKAFRLIE----------EKDLISWNTFIAAC 277
I+ L + LI +A R +E + D I W +AAC
Sbjct: 373 GIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAAC 420
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 197/577 (34%), Positives = 315/577 (54%), Gaps = 4/577 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + +L C+ L G LH + G++ D V+N +L +Y+KC + ARK+FD
Sbjct: 161 TFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTS 220
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ +LVSW+ +ISG+ Q G A F M + P+ FAS + + SL +
Sbjct: 221 PQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCK 280
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+IH Y ++ F+ ++LI +Y K A + ++ + V +I+G+V N
Sbjct: 281 EIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNG 340
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ ++ E F+ ++++ + P +F+ + L G LH +K KL+ VG+
Sbjct: 341 KNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGS 400
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
I+ +Y+K + A + F I EKD I WN+ I +CS + +++F++M + G R
Sbjct: 401 AILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGME-GTR 459
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D + + L+ACA L ++ +GK+IH +I+ L D+ ++L++MYAKCG ++ S ++
Sbjct: 460 YDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRV 519
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+ M RN VSWN+II+A+ NH L LF +M GI+PD VTF+G+++AC HAG V
Sbjct: 520 FDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQV 579
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG Y++ M + YGI +EH+ C+ D+ GRAG+L EA E P D V GTLL
Sbjct: 580 DEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLG 639
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC + +V + E +K LF L P + YVLL+N+ A G W V R ++K+ G++K
Sbjct: 640 ACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKV 699
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
P YS IEV F A+ SH +I +L +L L
Sbjct: 700 PGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLL 736
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 236/448 (52%), Gaps = 5/448 (1%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C K+++ G +H V MG++ DV V + ++ LYA+ G + A+ +FD + +++ V W
Sbjct: 68 CCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLW 127
Query: 72 SAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
+ M++G+ + G+ A++ F +M + PN FA +S CA L G Q+H ++
Sbjct: 128 NVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVS 187
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
G S V N+L++MY K A ++ + + +LVS+N +I+G+V+N + +
Sbjct: 188 CGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHL 247
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
F+ M+ G+ PD +FA L + L+ +H ++ + + F+ + ++ +Y K
Sbjct: 248 FRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFK 307
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
+ A+K D + T I+ ++ L F+ + + ++P TF+S
Sbjct: 308 CRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQER-MKPTSVTFSS 366
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
I A AGLA++ GK++H +I+ +L++ VG+A+++MYAKCG + + ++FN + ++
Sbjct: 367 IFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKD 426
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
+ WN++I + + + G A+ LF QM G + D V+ G L+AC + + G+
Sbjct: 427 AICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHG 486
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKL 456
M K + D+ + LID+ + G L
Sbjct: 487 LMIKG-PLRSDLYAESSLIDMYAKCGNL 513
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 216/440 (49%), Gaps = 6/440 (1%)
Query: 46 LYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYI 102
+Y + G + A+ +F + +W+ MI G G+ AL F+ +M + P++Y
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
F + AC G++S+ G+ +H G FVG+SLI +Y + G+ SDA ++
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
+ + V +N ++ G+V+N ++F M + P+ +FA L +C+ L G
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
LH + V C LE + V NT++A+YSK + A K F + DL+SWN I+
Sbjct: 181 LHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGL 240
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
+ +F+ M + G++PD TFAS L L S++H K+IH ++IR + DV + +
Sbjct: 241 MGEAEHLFRGMIS-AGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKS 299
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
AL+++Y KC + + K+ + + V T+I+ + + AL+ F + +KP
Sbjct: 300 ALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKP 359
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
SVTF + A + G+ S+ KT + + ++D+ + G+L A
Sbjct: 360 TSVTFSSIFPAFAGLAALNLGKELHGSIIKT-KLDEKCHVGSAILDMYAKCGRLDLACRV 418
Query: 463 TKKFPLGQDPIVLGTLLSAC 482
+ +D I +++++C
Sbjct: 419 FNRIT-EKDAICWNSMITSC 437
>gi|449508637|ref|XP_004163369.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 594
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 191/528 (36%), Positives = 301/528 (57%), Gaps = 7/528 (1%)
Query: 35 PDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM 94
P V +N + + + K G A +F+E+ ER++V+W+AMI G + A FS+M
Sbjct: 42 PSVWATNLIKSYFDK-GLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEM 100
Query: 95 ---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYM-KVGY 150
+ PN + +S + AC G+++L G H+ + K G +V N+L+ MY
Sbjct: 101 LRSEVQPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCAT 160
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
DAL V+ + VS+ LIAGF G F+ ML + + P+ FSF+
Sbjct: 161 MDDALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARA 220
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
C+ + G +H K L + V N+I+ +Y + N + +A++ F + EK+LI+W
Sbjct: 221 CASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITW 280
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
NT IA +D + LS+F +M ++ G +P+ FTF SI AACA LA + G+Q+H ++
Sbjct: 281 NTLIAGYER-SDSSESLSLFFQMGSE-GYKPNCFTFTSITAACANLAVLSCGQQVHGGIV 338
Query: 331 RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALK 390
R +++V + N+L++MYAKCG IS S+KLF +M R++VSW T++ + H G A+K
Sbjct: 339 RRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVK 398
Query: 391 LFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLL 450
LF++M +GI+PD + F+G+L C+HAGLV +G YF SM + Y I+PD E + C++DLL
Sbjct: 399 LFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLL 458
Query: 451 GRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYV 510
GRAG++ EA + + P D V G LL AC+ + +G A+++ +P Y+
Sbjct: 459 GRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYL 518
Query: 511 LLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVA 558
LLS +YA++G WG+ A RK++K KKE S IE++ F V
Sbjct: 519 LLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVVG 566
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 188/389 (48%), Gaps = 8/389 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLY-AKCGKMILARKVF 60
A ++SS+L C KAL G H+ K GI V V N +L++Y A C M A VF
Sbjct: 109 AFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVF 168
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLV 117
+++ + VSW+ +I+G G+ L F QM L PN + F+ A ACA I S
Sbjct: 169 NDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYS 228
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+QIHA K+G + V NS++ MY + Y DA +GE E NL+++N LIAG+
Sbjct: 229 CGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGY- 287
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
E + +F M +G P+ F+F C+ L G +H V+ + N
Sbjct: 288 ERSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVA 347
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+ N+++ +Y+K I ++ K F + +DL+SW T + ++ + +F EM
Sbjct: 348 LINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQS- 406
Query: 298 GVRPDDFTFASILAACAGLASVQHG-KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
G++PD F +L C+ V G K + L +N D + +V++ + G +
Sbjct: 407 GIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEE 466
Query: 357 SYKLFNEM-LHRNVVSWNTIIAAHANHRL 384
+++L M + W ++ A ++L
Sbjct: 467 AFQLVENMPFEPDESVWGALLGACKAYKL 495
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 182/541 (33%), Positives = 309/541 (57%), Gaps = 14/541 (2%)
Query: 46 LYAKCGKMILARKVF-DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEY 101
+Y+KC +M A +F D E N+ +++A+ISG G EF+ +M ++P+++
Sbjct: 1 MYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKF 60
Query: 102 IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA 161
F AI AC + + ++IH KFG F+G++L++ Y+K G A + + E
Sbjct: 61 TFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEEL 117
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
++V +NA++ G+ + Q E E F+ M + ++P RF+ G L + +V DL G
Sbjct: 118 PIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGR 177
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
I+H +K +S V N+++ +Y K I +A + F ++ EKD+ SWN+ + C
Sbjct: 178 IIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCG 237
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD---- 337
D++ L + M G++PD T ++L AC+ LA++ HG++IH ++I L +D
Sbjct: 238 DHDGTLRLLDRMLGA-GIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDI 296
Query: 338 --VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM 395
V + NA+++MYAKCG + ++ +F M +++V SWN +I + H G AL++F +M
Sbjct: 297 DDVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRM 356
Query: 396 KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGK 455
+KPD VTF+G+L+AC+HAG V +G + M+ Y ++P IEH+TC+ID+LGRAG+
Sbjct: 357 CEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQ 416
Query: 456 LLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNL 515
L EA E P+ +P+V LL+ACRL + V+ E A+++F L+P YVL+SN+
Sbjct: 417 LDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNV 476
Query: 516 YASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
Y + G + +V R ++ ++K P S IE++ F A+ +H + I L +L
Sbjct: 477 YGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAYSIYAGLNSL 536
Query: 576 S 576
+
Sbjct: 537 T 537
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 179/374 (47%), Gaps = 18/374 (4%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+H + K G++ DV + + ++N Y K G M A+ F+E+ R++V W+AM++G+ Q G+
Sbjct: 78 IHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQ 137
Query: 84 HLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
+ LE F +M+ ++P+ + +S A + L G+ IH +++K GY S V NS
Sbjct: 138 FEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNS 197
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
LI MY K DAL ++ E ++ S+N++ + + + + ML G+ PD
Sbjct: 198 LIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDHDGTLRLLDRMLGAGIQPD 257
Query: 201 RFSFAGGLEICSVSNDLRKG------MILHCLTVKCKLESNPFVGNTIMALYSKFNLIGE 254
+ L CS L G MI+ L K + + N ++ +Y+K + +
Sbjct: 258 LVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRD 317
Query: 255 AEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA 314
A F + KD+ SWN I + L +F M ++PD+ TF +L+AC+
Sbjct: 318 AHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQ-LKPDEVTFVGVLSACS 376
Query: 315 GLASVQHGKQIHAHLIRMRLNQDVGVG----NALVNMYAKCGLISCSYKLFNEM-LHRNV 369
V G+ L +M+ DV +++M + G + +Y+L M + N
Sbjct: 377 HAGFVSQGRNF---LAQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANP 433
Query: 370 VSWNTIIAAHANHR 383
V W ++AA H+
Sbjct: 434 VVWRALLAACRLHK 447
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 127/276 (46%), Gaps = 21/276 (7%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L G +H +KMG V VSN ++++Y KC + A ++F+ M E+++ SW+++ S
Sbjct: 173 LNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSV 232
Query: 78 HHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
H Q G+H L +M + P+ + + AC+ + +L+ G++IH Y + G
Sbjct: 233 HEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKD 292
Query: 135 S------FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
+ N++I MY K G DA LV+ ++ S+N +I G+ + + E+
Sbjct: 293 GKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEM 352
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
F M L PD +F G L CS G + +++S V TI
Sbjct: 353 FSRMCEVQLKPDEVTFVGVLSACS-----HAGFVSQGRNFLAQMKSKYDVAPTIEHYTCV 407
Query: 249 FNLIGEA-------EKAFRLIEEKDLISWNTFIAAC 277
+++G A E A + E + + W +AAC
Sbjct: 408 IDMLGRAGQLDEAYELALTMPIEANPVVWRALLAAC 443
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 187/571 (32%), Positives = 314/571 (54%), Gaps = 16/571 (2%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
+ C +K + Q + A ++ G Q + ++ ++ + A +M AR++FD++ + N+
Sbjct: 108 MRSCKTSKQVHQ---IQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNI 164
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQ---MHLLPNEYIFASAISACAGIQSLVKGQQIHAY 125
W++M G+ Q+ + + F Q M + PN + F + +C I +L++G+Q+H +
Sbjct: 165 ALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCF 224
Query: 126 SLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKG 185
+K G+ FVG +LI MY G DA ++ E FE N+V++ ++I G++ +
Sbjct: 225 LIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSA 284
Query: 186 FEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV-GNTIMA 244
+F L + ++ L VS + G ++ + ++ + + NT++
Sbjct: 285 RRLFDLAPERDVV---------LWNIMVSGYIEGGDMVEARKLFXEMPNRDVMFWNTVLK 335
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
Y+ + E F + E+++ SWN I +H + + L FK M ++ V P+D
Sbjct: 336 GYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDA 395
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T ++L+ACA L ++ GK +H + L +V VGNAL++MYAKCG+I + +F M
Sbjct: 396 TLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGM 455
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
++++SWNT+I A H G AL LF QMK G KPD +TFIG+L AC H GLV++G
Sbjct: 456 DTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGF 515
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRL 484
AYF SM Y I P IEH+ C++D+L RAG+L +A + +K P+ D ++ LL ACR+
Sbjct: 516 AYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLLGACRI 575
Query: 485 RRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYS 544
++V + E ++L L+P + YV+LSN+Y G W DVA + ++D+G KK P S
Sbjct: 576 YKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCS 635
Query: 545 MIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+IEV +F + H +I EI +L+ L
Sbjct: 636 LIEVNDAVVEFYSLDERHPQIEEIYGVLRGL 666
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 153/318 (48%), Gaps = 11/318 (3%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L C K AL +G +H ++K G + + V ++++Y+ G + A K+F EM ERN
Sbjct: 205 VLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERN 264
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSL 127
+V+W++MI+G+ + + + A F L P + I I+ G + A L
Sbjct: 265 VVAWTSMINGYILSADLVSARRLFD---LAPERDVVLWNIMVSGYIEG---GDMVEARKL 318
Query: 128 --KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKG 185
+ + F N+++ Y G ++ E E N+ S+NALI G+ N +
Sbjct: 319 FXEMPNRDVMF-WNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEV 377
Query: 186 FEVFKLMLRQG-LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
FK ML + + P+ + L C+ L G +H L+ N +VGN +M
Sbjct: 378 LGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMD 437
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y+K +I A FR ++ KDLISWNT I + + L++F +M N G +PD
Sbjct: 438 MYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKN-AGQKPDGI 496
Query: 305 TFASILAACAGLASVQHG 322
TF IL AC + V+ G
Sbjct: 497 TFIGILCACTHMGLVEDG 514
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L C++ AL G +H G++ +V V N ++++YAKCG + A VF M
Sbjct: 396 TLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGM 455
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
++L+SW+ +I G AL F QM P+ F + AC
Sbjct: 456 DTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACT 506
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 196/559 (35%), Positives = 311/559 (55%), Gaps = 10/559 (1%)
Query: 23 SLHAAVLKMGI-QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQA 81
SLH LK+G+ +V+V N +L+ Y K G + AR+VF EM R+ V+++AM+ G +
Sbjct: 160 SLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKE 219
Query: 82 GEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVG 138
G H AL+ F+ M L + F++ ++ G+ L G+Q+H + +++ FV
Sbjct: 220 GSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARATSSNV-FVN 278
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL 198
NSL+ Y K + ++ E E + VS+N +IAG+ N+ +F+ M Q L
Sbjct: 279 NSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREM--QSLS 336
Query: 199 PDR--FSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
DR +A L + + G +H V L S VGN ++ +YSK ++ A+
Sbjct: 337 FDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAK 396
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
F +K +SW I C E+ L +F M G+ PD TF+S + A + L
Sbjct: 397 TNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRR-AGLSPDRATFSSTIKASSNL 455
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
A + G+Q+H++LIR V G+AL++MY KCG + + + F+EM RN +SWN +I
Sbjct: 456 AMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVI 515
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
+A+A++ +A+K+FE M G KPDSVTF+ +L+AC+H GL +E YF ME YGI
Sbjct: 516 SAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGI 575
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAK 496
SP EH++C+ID LGR G+ + +E + P DPI+ ++L +CR + + A+
Sbjct: 576 SPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAE 635
Query: 497 QLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFT 556
+LF + T +PYV+LSN++A G W D AG +K+++D GL+KE YS +EV+ F+
Sbjct: 636 KLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFS 695
Query: 557 VAEFSHSKIGEINYMLKTL 575
+ ++ I EI L+ L
Sbjct: 696 SNDQTNPMITEIKDELERL 714
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 164/337 (48%), Gaps = 17/337 (5%)
Query: 135 SFVGNSLISMYMKVGYSSDA--LLVYGEAFEPNLVSFNALIAGFVE--NQQPEKGFEVFK 190
+F N ++S Y + G S A L + + V++ +I F + +F+
Sbjct: 66 AFSLNRMLSGYSRSGQLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFR 125
Query: 191 LMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI---LHCLTVKCK-LESNPFVGNTIMALY 246
MLR+G+ PDR + A L + S +I LH +K L SN V NT++ Y
Sbjct: 126 DMLREGVAPDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAY 185
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
K L+ A + F+ + +D +++N + CS + + L +F M G+ FTF
Sbjct: 186 CKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRR-KGLAATRFTF 244
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
+++L G+ + G+Q+H L+ + +V V N+L++ Y+KC + KLF+EM+
Sbjct: 245 STVLTVATGVGDLCLGRQVHG-LVARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIE 303
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT---ACNHAGLVKEG 423
R+ VS+N +IA +A +R L+LF +M++ ++ + LL+ + H G+ K+
Sbjct: 304 RDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQI 363
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
A + G+S + LID+ + G L A+
Sbjct: 364 HAQLVLL----GLSSEDLVGNALIDMYSKCGMLDAAK 396
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 116/210 (55%), Gaps = 3/210 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+SLL + G +HA ++ +G+ + +V N ++++Y+KCG + A+ F ++
Sbjct: 345 ASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKND 404
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
+ VSW+AMI+G Q G+ AL+ F M L P+ F+S I A + + + G+Q+
Sbjct: 405 KTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQL 464
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H+Y ++ G+ S F G++L+ MY K G +AL + E E N +S+NA+I+ + Q
Sbjct: 465 HSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQA 524
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
+ ++F+ ML G PD +F L CS
Sbjct: 525 KNAIKMFEGMLCYGFKPDSVTFLSVLSACS 554
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS + S + G LH+ +++ G V + +L++Y KCG + A + FDEM
Sbjct: 444 TFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEM 503
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
ERN +SW+A+IS + G+ A++ F M P+ F S +SAC+
Sbjct: 504 PERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACS 554
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 198/584 (33%), Positives = 328/584 (56%), Gaps = 15/584 (2%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQP-DVIVSNHVLNLYAKCGKMILARKVFDEM 63
+S+L + + L+ G +H +L+ G+ + VSN ++N+YAKCG + A K+F M
Sbjct: 382 LSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLM 441
Query: 64 SERNLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
+ +SW+ +IS Q G E ++ Q + P+ + S++S+CAG++ L GQ
Sbjct: 442 EATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQ 501
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H ++K+G + V N L+ MY + G SD V+ E + VS+N ++ +Q
Sbjct: 502 QVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQ 561
Query: 181 QP-EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
P + +VF M+R GL+P++ +F L S + L G +H +K + + V
Sbjct: 562 TPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVD 621
Query: 240 NTIMALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N +++ Y+K +G E F + + +D ISWN+ I+ + + ++ + M + G
Sbjct: 622 NALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHS-G 680
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
D TF+ IL ACA +A+++ G ++HA IR L DV V +ALV+MY+KCG + +
Sbjct: 681 QIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYAS 740
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
KLFN M RN SWN++I+ +A H LG A+++FE+M + PD VTF+ +L+AC+HAG
Sbjct: 741 KLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAG 800
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV+ G YF M +GI P IEH++C+IDLLGRAGK+ + +EY ++ P+ + ++ T+
Sbjct: 801 LVERGLEYFEMMPD-HGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTV 859
Query: 479 LSACRLRRD---VVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
L ACR +D + +G ++ L ++P YVL SN +A+ GMW D A AR ++ +
Sbjct: 860 LVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLASNFHAATGMWEDTAKARTAMRQA 919
Query: 536 GLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI----NYMLKTL 575
KKE S + + F + SH EI N++++ +
Sbjct: 920 TEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIYEKLNFLIQNI 963
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 134/466 (28%), Positives = 220/466 (47%), Gaps = 30/466 (6%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
+LH ++K G+ D+ + NH++N YAK ++ A +VFDEM ERN VSW+ ++SG+ G
Sbjct: 82 NLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHG 141
Query: 83 EHLLALEFFSQM------HLLPNEYIFASAISAC--AGIQSLVKGQQIHAYSLKFGYASI 134
A F M P + F + + AC G L Q+H K YAS
Sbjct: 142 IAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASN 201
Query: 135 SFVGNSLISMY--MKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM 192
+ V N+LISMY VG A V+ +L+++NAL++ + + F +FK M
Sbjct: 202 TTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDM 261
Query: 193 LRQG----LLPDRFSFAGGLEICSVSNDLRKGMILHCLTV---KCKLESNPFVGNTIMAL 245
R L P +F G I + S +L + V K S+ +VG+ +++
Sbjct: 262 QRGDSRIQLRPTEHTF--GSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSA 319
Query: 246 YSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFT 305
+++ L EA+ F +++K+ ++ N I E+ + +F N V D T
Sbjct: 320 FARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNAD--T 377
Query: 306 FASILAACAGLA----SVQHGKQIHAHLIRMRLNQ-DVGVGNALVNMYAKCGLISCSYKL 360
+ +L+A A + ++ G+ +H H++R L + V N LVNMYAKCG I + K+
Sbjct: 378 YVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKI 437
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F M + +SWNTII+A + A+ + M+ + I P + I L++C L+
Sbjct: 438 FQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLL 497
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
G+ K +G+ D L+ + G G + +Y K F
Sbjct: 498 TAGQQVHCDAVK-WGLDLDTSVSNVLVKMYGECGAM---SDYWKVF 539
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 174/380 (45%), Gaps = 23/380 (6%)
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ +H +K G F+ N L++ Y K + A V+ E E N VS+ L++G+V +
Sbjct: 81 ENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLH 140
Query: 180 QQPEKGFEVFKLMLRQ---GLLPDRFSFAGGLEICSVSNDLRKGMI--LHCLTVKCKLES 234
E+ F VF+ MLR+ G P F+F L C R G +H L K + S
Sbjct: 141 GIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYAS 200
Query: 235 NPFVGNTIMALYSKFNLIGE---AEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK 291
N V N ++++Y +G A++ F +DLI+WN ++ + D ++FK
Sbjct: 201 NTTVCNALISMYGSCT-VGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFK 259
Query: 292 EMSNDHG---VRPDDFTFASILAACAGLASVQHG-KQIHAHLIRMRLNQDVGVGNALVNM 347
+M +RP + TF S++ A + + Q+ +++ + D+ VG+ALV+
Sbjct: 260 DMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSA 319
Query: 348 YAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTF 407
+A+ GL + +F + +N V+ N +I A+K+F + T + ++ T+
Sbjct: 320 FARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNT-VDVNADTY 378
Query: 408 IGLLTACNHAGLVKE----GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYT 463
+ LL+A + +E G M +T I L+++ + G + E +
Sbjct: 379 VVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAI---ESAS 435
Query: 464 KKFPL--GQDPIVLGTLLSA 481
K F L D I T++SA
Sbjct: 436 KIFQLMEATDRISWNTIISA 455
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 72/111 (64%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S +L+ C+ AL++G+ LHA ++ ++ DV+V + ++++Y+KCG++ A K+F+ M
Sbjct: 687 TFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSM 746
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
++RN SW++MISG+ + G A+E F +M P+ F S +SAC+
Sbjct: 747 TQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACS 797
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 198/603 (32%), Positives = 321/603 (53%), Gaps = 35/603 (5%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL CSK A +G+ +H V+KMG+ D+ V+N +++ YA CGK+ L RKVFDEM ERN
Sbjct: 128 LLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERN 187
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
+VSW+++I+G+ A+ F +M + PN AISACA ++ L G+++
Sbjct: 188 VVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCN 247
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ G S + V N+L+ MYMK G ++ E + NLV +N +++ +V++ +
Sbjct: 248 LMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGE 307
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
V ML++G PD+ + + C+ DL G H + LE + N I+
Sbjct: 308 VLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIID 367
Query: 245 LYSK---------------------FNLI-------GEAEKAFRL---IEEKDLISWNTF 273
+Y K +N + GE E A R+ + E +L+SWNT
Sbjct: 368 MYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTM 427
Query: 274 IAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR 333
I A + +E+ + + +EM N G++ D T I +AC L ++ K I+ ++ +
Sbjct: 428 IGAMVQASMFEEAIDLLREMQN-QGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKND 486
Query: 334 LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFE 393
++ D+ +G ALV+M+++CG + ++F M R+V +W I A A++LF+
Sbjct: 487 IHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFD 546
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 453
+M +K D F+ LLTA +H G V +G F +MEK +G+SP I H+ C++DLLGRA
Sbjct: 547 EMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRA 606
Query: 454 GKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLS 513
G L EA + K P+ + ++ G+ L+ACR ++V +++ L P +VLLS
Sbjct: 607 GLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLS 666
Query: 514 NLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLK 573
N+YAS G W DVA R +K+ G +K S IEV G +FT + SH++ +I ML+
Sbjct: 667 NIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQ 726
Query: 574 TLS 576
++
Sbjct: 727 EIN 729
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 221/488 (45%), Gaps = 58/488 (11%)
Query: 11 HCSKTKALQQGI----SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
HC+ L++G+ L AA ++MG + N+ LN + + DE ++
Sbjct: 42 HCN---MLKKGVFNINKLIAACVQMGTHESL---NYALNAFKE-----------DEGTKC 84
Query: 67 NLVSWSAMISGHHQAG----EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQI 122
+L + + +I G+ +G + L M ++P+ + F +SAC+ I + +G Q+
Sbjct: 85 SLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQV 144
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H +K G FV NSLI Y G V+ E E N+VS+ +LI G+
Sbjct: 145 HGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMA 204
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
++ +F M+ G+ P+ + + C+ DL G + L + ++SN V N +
Sbjct: 205 KEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNAL 264
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y K + + F +K+L+ +NT ++ + L V EM G RPD
Sbjct: 265 LDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQ-KGQRPD 323
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL--------- 353
T S +AACA L + GK HA++ R L + + NA+++MY KCG
Sbjct: 324 KVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFD 383
Query: 354 ----------------------ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
+ + ++F EM N+VSWNT+I A + A+ L
Sbjct: 384 SMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDL 443
Query: 392 FEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLG 451
+M+ GIK D VT +G+ +AC + G + + + +EK I D++ T L+D+
Sbjct: 444 LREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKN-DIHIDMQLGTALVDMFS 502
Query: 452 RAGKLLEA 459
R G L A
Sbjct: 503 RCGDPLNA 510
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 110/480 (22%), Positives = 207/480 (43%), Gaps = 74/480 (15%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQP---------------------------- 35
S +SL++ S ++ + L ++++G++P
Sbjct: 190 SWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLM 249
Query: 36 -------DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ---AGEHL 85
+ +V N +L++Y KCG M R++FDE S++NLV ++ ++S + Q AGE L
Sbjct: 250 TELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVL 309
Query: 86 LALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMY 145
+ L+ Q P++ S I+ACA + L G+ HAY + G + + N++I MY
Sbjct: 310 VVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMY 369
Query: 146 MKVGYSSD-------------------------------ALLVYGEAFEPNLVSFNALIA 174
MK G AL ++GE E NLVS+N +I
Sbjct: 370 MKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIG 429
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
V+ E+ ++ + M QG+ DR + G C L ++ K +
Sbjct: 430 AMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHI 489
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
+ +G ++ ++S+ A + F +E++D+ +W I + + + + +F EM
Sbjct: 490 DMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEML 549
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGL 353
V+ DDF F ++L A + V G+Q+ + ++ ++ + +V++ + GL
Sbjct: 550 K-QDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGL 608
Query: 354 ISCSYKLFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
+ ++ L M + N V W + +AA H+ + K T + P+ V LL+
Sbjct: 609 LEEAFDLMKSMPIKPNDVIWGSFLAACRKHK--NVEFANYADEKITQLAPEKVGIHVLLS 666
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 116/214 (54%), Gaps = 2/214 (0%)
Query: 267 LISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
L + NT I + ++ + ++ M G+ PD+FTF +L+AC+ + + G Q+H
Sbjct: 86 LYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVH 145
Query: 327 AHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGG 386
+++M L +D+ V N+L++ YA CG + K+F+EML RNVVSW ++I ++ +
Sbjct: 146 GVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAK 205
Query: 387 SALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCL 446
A+ LF +M G++P+ VT + ++AC ++ G+ N M + G+ + L
Sbjct: 206 EAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTE-LGVKSNTLVVNAL 264
Query: 447 IDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+D+ + G + E +F ++ ++ T++S
Sbjct: 265 LDMYMKCGDMYAVREIFDEFS-DKNLVMYNTIMS 297
>gi|449435950|ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 606
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 191/528 (36%), Positives = 301/528 (57%), Gaps = 7/528 (1%)
Query: 35 PDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM 94
P V +N + + + K G A +F+E+ ER++V+W+AMI G + A FS+M
Sbjct: 42 PSVWATNLIKSYFDK-GLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEM 100
Query: 95 ---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYM-KVGY 150
+ PN + +S + AC G+++L G H+ + K G +V N+L+ MY
Sbjct: 101 LRSEVQPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCAT 160
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
DAL V+ + VS+ LIAGF G F+ ML + + P+ FSF+
Sbjct: 161 MDDALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARA 220
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
C+ + G +H K L + V N+I+ +Y + N + +A++ F + EK+LI+W
Sbjct: 221 CASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITW 280
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
NT IA +D + LS+F +M ++ G +P+ FTF SI AACA LA + G+Q+H ++
Sbjct: 281 NTLIAGYER-SDSSESLSLFFQMGSE-GYKPNCFTFTSITAACANLAVLSCGQQVHGGIV 338
Query: 331 RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALK 390
R +++V + N+L++MYAKCG IS S+KLF +M R++VSW T++ + H G A+K
Sbjct: 339 RRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVK 398
Query: 391 LFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLL 450
LF++M +GI+PD + F+G+L C+HAGLV +G YF SM + Y I+PD E + C++DLL
Sbjct: 399 LFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLL 458
Query: 451 GRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYV 510
GRAG++ EA + + P D V G LL AC+ + +G A+++ +P Y+
Sbjct: 459 GRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYL 518
Query: 511 LLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVA 558
LLS +YA++G WG+ A RK++K KKE S IE++ F V
Sbjct: 519 LLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVVG 566
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 188/389 (48%), Gaps = 8/389 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLY-AKCGKMILARKVF 60
A ++SS+L C KAL G H+ K GI V V N +L++Y A C M A VF
Sbjct: 109 AFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVF 168
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLV 117
+++ + VSW+ +I+G G+ L F QM L PN + F+ A ACA I S
Sbjct: 169 NDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYS 228
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+QIHA K+G + V NS++ MY + Y DA +GE E NL+++N LIAG+
Sbjct: 229 CGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGY- 287
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
E + +F M +G P+ F+F C+ L G +H V+ + N
Sbjct: 288 ERSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVA 347
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+ N+++ +Y+K I ++ K F + +DL+SW T + ++ + +F EM
Sbjct: 348 LINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQS- 406
Query: 298 GVRPDDFTFASILAACAGLASVQHG-KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
G++PD F +L C+ V G K + L +N D + +V++ + G +
Sbjct: 407 GIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEE 466
Query: 357 SYKLFNEM-LHRNVVSWNTIIAAHANHRL 384
+++L M + W ++ A ++L
Sbjct: 467 AFQLVENMPFEPDESVWGALLGACKAYKL 495
>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
Length = 781
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 187/569 (32%), Positives = 327/569 (57%), Gaps = 5/569 (0%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C++ L +G + H V+K+G++ DV N ++ YAK G + A +VFD M R++V+W
Sbjct: 117 CARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTW 176
Query: 72 SAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQQIHAYSL 127
+ M+ G+ G LAL F +MH + + +A++AC S ++G++IH Y +
Sbjct: 177 NIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYVI 236
Query: 128 KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE 187
+ G VG SL+ MY K G + A V+ +V++N +I G+ N++P++ F+
Sbjct: 237 RHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFD 296
Query: 188 VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYS 247
F M +GL + + L C+ + G +H V+ + + + ++ +Y
Sbjct: 297 CFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYG 356
Query: 248 KFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFA 307
K + +EK F I K L+SWN IAA + Y + +++F E+ N + PD FT +
Sbjct: 357 KVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLN-QPLYPDYFTMS 415
Query: 308 SILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR 367
+++ A L S++H +QIH+++I + ++ + NA+++MYA+ G + S ++F++M+ +
Sbjct: 416 TVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSK 475
Query: 368 NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYF 427
+V+SWNT+I +A H G +AL++F++MK G++P+ TF+ +LTAC+ +GLV EG +F
Sbjct: 476 DVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHF 535
Query: 428 NSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRD 487
N M + YG+ P IEH+ C+ DLLGR G L E ++ + P+ V G+LL+A R + D
Sbjct: 536 NLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQND 595
Query: 488 VVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIE 547
+ I E A+++F L+ T Y++LS++YA G W DV R ++K+ GL++ S++E
Sbjct: 596 IDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVE 655
Query: 548 VQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
+ T F + SHS+ I+ + LS
Sbjct: 656 LHSTACSFANGDMSHSQSRTIHEVSDILS 684
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 153/298 (51%), Gaps = 1/298 (0%)
Query: 164 PNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMIL 223
P+ N +I GF + P ++ ML G PDRF+F ++ C+ L +G
Sbjct: 70 PDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAA 129
Query: 224 HCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY 283
H + +K LE + + N+++A Y+K L+ +AE+ F + +D+++WN +
Sbjct: 130 HGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLG 189
Query: 284 EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA 343
L+ F+EM + V+ D + LAAC S GK+IH ++IR L QD+ VG +
Sbjct: 190 SLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTS 249
Query: 344 LVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPD 403
L++MY KCG ++ + +F M R VV+WN +I +A + A F QM+A G++ +
Sbjct: 250 LLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVE 309
Query: 404 SVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
VT I LL AC G + + + + P + T L+++ G+ GK+ +E+
Sbjct: 310 VVTAINLLAACAQTESSLYGRSVHGYVVRRQFL-PHVVLETALLEMYGKVGKVESSEK 366
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 150/317 (47%), Gaps = 2/317 (0%)
Query: 98 PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV 157
P+ + F + CA + L +G+ H +K G + NSL++ Y K+G DA V
Sbjct: 105 PDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERV 164
Query: 158 YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSND 216
+ ++V++N ++ G+V N F+ M + D L C +
Sbjct: 165 FDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFS 224
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
+G +H ++ LE + VG +++ +Y K + A F + + +++WN I
Sbjct: 225 SMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGG 284
Query: 277 CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
+ ++ F +M + G++ + T ++LAACA S +G+ +H +++R +
Sbjct: 285 YALNERPDEAFDCFMQMRAE-GLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLP 343
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
V + AL+ MY K G + S K+F ++ ++ +VSWN +IAA+ + A+ LF ++
Sbjct: 344 HVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELL 403
Query: 397 ATGIKPDSVTFIGLLTA 413
+ PD T ++ A
Sbjct: 404 NQPLYPDYFTMSTVVPA 420
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 108/218 (49%), Gaps = 3/218 (1%)
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ EA +A + D N I + L+ ++ M D G RPD FTF ++
Sbjct: 57 MDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLED-GARPDRFTFPVVVK 115
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
CA L + G+ H +I++ L DV N+LV YAK GL+ + ++F+ M R++V+
Sbjct: 116 CCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVT 175
Query: 372 WNTIIAAHANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSM 430
WN ++ + ++ LG AL F++M A ++ DSV I L AC +G+ +
Sbjct: 176 WNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYV 235
Query: 431 EKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
+ +G+ DI+ T L+D+ + G++ A PL
Sbjct: 236 IR-HGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPL 272
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 194/576 (33%), Positives = 319/576 (55%), Gaps = 17/576 (2%)
Query: 16 KALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMI 75
+ L G +HA L+ G + + + N ++ +Y K GK+ ++ + R+LV+W+ ++
Sbjct: 212 EGLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVL 270
Query: 76 SGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFG-Y 131
S Q + L ALE+ +M L P+ + +S + AC+ ++ L G+++HAY+LK G
Sbjct: 271 SSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSL 330
Query: 132 ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKL 191
SFVG++L+ MY V+ F+ + +NA+I G+ +N+ E+ +F
Sbjct: 331 DENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIE 390
Query: 192 MLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN 250
M GLL + + AG + C S K +H VK L+ + FV N +M +YS+
Sbjct: 391 MEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLG 450
Query: 251 LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM----------SNDHGVR 300
I A++ F +E++DL++WNT I +E L + +M ++ ++
Sbjct: 451 KIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLK 510
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P+ T +IL +CA L+++ GK+IHA+ I+ L DV VG+ALV+MYAKCG + S K+
Sbjct: 511 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKV 570
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+++ RNV++WN I+ A+ H A+ + M G+KP+ VTFI + AC+H+G+V
Sbjct: 571 FDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMV 630
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI-VLGTLL 479
EG F +M+K YG+ P +H+ C++DLLGRAG++ EA + P D +LL
Sbjct: 631 NEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLL 690
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
ACR+ ++ IGE A+ L L+P S YVLL+N+Y+S G+W R+ +K G++K
Sbjct: 691 GACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRK 750
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
EP S IE KF + SH + ++ L+TL
Sbjct: 751 EPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETL 786
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 136/485 (28%), Positives = 248/485 (51%), Gaps = 23/485 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPD-VIVSNHVLNLYAKCGKMILARKVFDE 62
+ +LL + + + G +HA V K G D V V+N ++NLY KCG KVFD
Sbjct: 95 AFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR 154
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGI---QSL 116
+SERN VSW+++IS + +ALE F M + P+ + S AC+ + L
Sbjct: 155 ISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGL 214
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
+ G+Q+HAY L+ G + SF+ N+L++MY K+G + + ++ G +LV++N +++
Sbjct: 215 LMGKQVHAYGLRKGELN-SFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSL 273
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC-KLESN 235
+N+Q + E + M+ +G+ PD F+ + L CS LR G LH +K L+ N
Sbjct: 274 CQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 333
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
FVG+ ++ +Y + + F + ++ + WN I + E+ L +F EM
Sbjct: 334 SFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEE 393
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
G+ + T A ++ AC + + IH +++ L++D V NAL++MY++ G I
Sbjct: 394 SAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKID 453
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK-----------ATGIKPDS 404
+ ++F +M R++V+WNTII + AL + +M+ +KP+S
Sbjct: 454 IAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNS 513
Query: 405 VTFIGLLTACNH-AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYT 463
+T + +L +C + L K E + +++ ++ D+ + L+D+ + G L + +
Sbjct: 514 ITLMTILPSCAALSALAKGKEIHAYAIKNN--LATDVAVGSALVDMYAKCGCLQMSRKVF 571
Query: 464 KKFPL 468
+ P+
Sbjct: 572 DQIPI 576
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 202/389 (51%), Gaps = 10/389 (2%)
Query: 98 PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF-VGNSLISMYMKVGYSSDALL 156
P+ + F + + A A +Q + G+QIHA+ KFGY S V N+L+++Y K G
Sbjct: 91 PDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYK 150
Query: 157 VYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS---V 213
V+ E N VS+N+LI+ ++ E E F+ ML + + P F+ CS +
Sbjct: 151 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPM 210
Query: 214 SNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTF 273
L G +H ++ K E N F+ NT++A+Y K + ++ E +DL++WNT
Sbjct: 211 PEGLLMGKQVHAYGLR-KGELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTV 269
Query: 274 IAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM- 332
+++ + + L +EM + GV PD FT +S+L AC+ L ++ GK++HA+ ++
Sbjct: 270 LSSLCQNEQFLEALEYLREMVLE-GVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNG 328
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
L+++ VG+ALV+MY C + ++F+ M R + WN +I +A + AL LF
Sbjct: 329 SLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLF 388
Query: 393 EQM-KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLG 451
+M ++ G+ +S T G++ AC +G + EA + K G+ D L+D+
Sbjct: 389 IEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKR-GLDRDRFVQNALMDMYS 447
Query: 452 RAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
R GK+ A+ K +D + T+++
Sbjct: 448 RLGKIDIAKRIFGKME-DRDLVTWNTIIT 475
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 208/421 (49%), Gaps = 35/421 (8%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+ISS+L CS + L+ G LHA LK G + + V + ++++Y C +++ +VFD
Sbjct: 300 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDG 359
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVK 118
M +R + W+AMI+G+ Q AL F +M LL N A + AC + K
Sbjct: 360 MFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSK 419
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+ IH + +K G FV N+L+ MY ++G A ++G+ + +LV++N +I G+V
Sbjct: 420 KEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVF 479
Query: 179 NQQPEKGFEVFKLML-----------RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLT 227
+++ E + M R L P+ + L C+ + L KG +H
Sbjct: 480 SERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 539
Query: 228 VKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGL 287
+K L ++ VG+ ++ +Y+K + + K F I +++I+WN + A + + +
Sbjct: 540 IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAI 599
Query: 288 SVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA---- 343
+ + M GV+P++ TF S+ AAC+ V G +I + + +D GV +
Sbjct: 600 DMLRMMMV-QGVKPNEVTFISVFAACSHSGMVNEGLKIFYN-----MKKDYGVEPSSDHY 653
Query: 344 --LVNMYAKCGLISCSYKLFNEMLHRN---VVSWNTIIAA---HANHRLGGSALKLFEQM 395
+V++ + G + +Y+L N ++ RN +W++++ A H N +G A + Q+
Sbjct: 654 ACVVDLLGRAGRVKEAYQLIN-LIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQL 712
Query: 396 K 396
+
Sbjct: 713 E 713
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 117/238 (49%), Gaps = 8/238 (3%)
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF-VGNTIMALYSKFN 250
M+ G+ PD F+F L+ + D+ G +H K + V NT++ LY K
Sbjct: 84 MIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 143
Query: 251 LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
G K F I E++ +SWN+ I++ +E L F+ M D V P FT S+
Sbjct: 144 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML-DEDVEPSSFTLVSVA 202
Query: 311 AACAGLASVQ---HGKQIHAHLIRM-RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
AC+ + GKQ+HA+ +R LN + N LV MY K G ++ S L
Sbjct: 203 LACSNFPMPEGLLMGKQVHAYGLRKGELNS--FIINTLVAMYGKMGKLASSKVLLGSFEG 260
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
R++V+WNT++++ + AL+ +M G++PD T +L AC+H +++ G+
Sbjct: 261 RDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGK 318
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 7/188 (3%)
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD-VGVGNALVNMYAKCGLISC 356
G++PD+F F ++L A A L + GKQIHAH+ + D V V N LVN+Y KCG
Sbjct: 88 GIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 147
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
YK+F+ + RN VSWN++I++ + AL+ F M ++P S T + + AC++
Sbjct: 148 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSN 207
Query: 417 AGLVKEGEAYFNSMEKTYGISP-DIEHF--TCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
+ EG YG+ ++ F L+ + G+ GKL ++ F G+D +
Sbjct: 208 FPM-PEG-LLMGKQVHAYGLRKGELNSFIINTLVAMYGKMGKLASSKVLLGSFE-GRDLV 264
Query: 474 VLGTLLSA 481
T+LS+
Sbjct: 265 TWNTVLSS 272
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 192/569 (33%), Positives = 310/569 (54%), Gaps = 13/569 (2%)
Query: 9 LHHC----SKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYA--KCGKMILARKVFDE 62
LH C K + Q +HA +L+ + D ++ ++ A G + AR VF++
Sbjct: 40 LHPCLLSLEKCTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQ 99
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKG 119
+ + +++I G+ A+ F+ M L P+ + F S +C L +G
Sbjct: 100 IPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCG---VLCEG 156
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+H +S K G+AS +++ N+L++MY G A V+ + ++VS+ +I + +
Sbjct: 157 KQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQW 216
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
P + ++F+ M + P+ + L C+ S DL +H + + + +
Sbjct: 217 DLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLT 276
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+ +M +Y K A F + EK+L WN I +DYE+ LS+F EM GV
Sbjct: 277 SALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLS-GV 335
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+ D T AS+L AC L +++ GK +H ++ + ++ DV +G ALV+MYAKCG I + +
Sbjct: 336 KGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMR 395
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F EM ++V++W +I A G AL+LF +M+ + +KPD++TF+G+L AC+HAGL
Sbjct: 396 VFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGL 455
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V EG AYFNSM YGI P IEH+ C++D+LGRAG++ EAE+ + P+ D VL LL
Sbjct: 456 VNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLL 515
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
SACR+ ++V+ ER A+QL L P YVLLSN+Y+S W R+++ + +KK
Sbjct: 516 SACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKK 575
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
P S IEV G +F + SH + EI
Sbjct: 576 PPGCSAIEVGGVVHEFVKGDVSHPQSSEI 604
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 119/221 (53%), Gaps = 3/221 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L C++++ L+ +H + + GI ++++ ++++Y KCG LAR +F++M
Sbjct: 240 TLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKM 299
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
E+NL W+ MI+GH + ++ AL F++M L ++ AS + AC + +L G+
Sbjct: 300 PEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGK 359
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H Y K +G +L+ MY K G A+ V+ E E +++++ ALI G
Sbjct: 360 WLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCG 419
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
Q K E+F M + PD +F G L CS + + +G+
Sbjct: 420 QGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGI 460
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 193/578 (33%), Positives = 325/578 (56%), Gaps = 7/578 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+I L C+ + L+ G +H K I D+ V + ++ LY+KCG+M A KVF+E
Sbjct: 105 TIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEE 164
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP----NEYIFASAISACAGIQSLVK 118
+ V W++M++G+ Q + AL FSQM ++ + S +SACA + ++
Sbjct: 165 FQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKA 224
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G +H ++ + + NSL+++Y K G A ++ + E +++S++ +IA +
Sbjct: 225 GSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYAN 284
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N+ + +F M+ + P+ + L+ C+VS +L +G +H + V E + V
Sbjct: 285 NEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSV 344
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++ +Y K + EA F+ + +KD++SW ++ + K + VF+ M +D G
Sbjct: 345 STALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSD-G 403
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
++PD ILAA + L Q +H +++R N +V VG +L+ +Y+KCG + +
Sbjct: 404 IQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAV 463
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTACNHA 417
KLF M+ R+VV W+++IAA+ H GG AL++F+QM K + ++P++VTF+ +L+AC+HA
Sbjct: 464 KLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHA 523
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV+EG F+ M Y + PD EHF ++DLLGR G+L +A + + P+ P V G
Sbjct: 524 GLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGA 583
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL ACR+ ++ +GE AK LF L P+ Y+LLSN+YA DG W +VA R +K+ GL
Sbjct: 584 LLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGL 643
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KK SM+EV+G F ++ H +I +L+ L
Sbjct: 644 KKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKL 681
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/489 (30%), Positives = 265/489 (54%), Gaps = 1/489 (0%)
Query: 88 LEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMK 147
L+F+ ++ ++Y + I ++ HA +G S + MY+
Sbjct: 705 LQFWQRIKATESKYKTIGSAPGTDTISCFSCLKKTHAKIFAYGLQYDSRILTKFAIMYVS 764
Query: 148 VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGG 207
A +V+ + P +N +I GF + + E++ M+ +GL PD+F+F
Sbjct: 765 FNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFA 824
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDL 267
L+ C+ +DL++G ++H V C ++ FV ++ +Y+K I A F + +DL
Sbjct: 825 LKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDL 884
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHA 327
+SW + I+ +H + L F M + GV P+ + S+L AC L +++ G+ H+
Sbjct: 885 VSWTSMISGYAHNGYNSETLGFFDLMRSS-GVIPNRVSILSVLLACGNLGALRKGEWFHS 943
Query: 328 HLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGS 387
++I+ D+ V A+++MY+KCG + + LF+E +++V W+ +IA++ H G
Sbjct: 944 YVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRK 1003
Query: 388 ALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLI 447
A+ LF+QM G++P VTF +L+AC+H+GL++EG+ YF M + + I+ + ++ C++
Sbjct: 1004 AIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMV 1063
Query: 448 DLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTS 507
DLLGRAG+L EA + + P+ D + G+LL ACR+ ++ + E++A LFHL P
Sbjct: 1064 DLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAG 1123
Query: 508 PYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGE 567
+VLLSN+YA+ W +V RKM+ G K +S++E KF V + SH + +
Sbjct: 1124 YHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEK 1183
Query: 568 INYMLKTLS 576
+ L+ L+
Sbjct: 1184 LYAKLEELA 1192
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 128/484 (26%), Positives = 247/484 (51%), Gaps = 18/484 (3%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
L C+ +++ Q LH+ V K GI D + + +LYAKC + ARKVFDE
Sbjct: 9 DLFQACNNGRSVSQ---LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHP 65
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLL-------PNEYIFASAISACAGIQSLVKG 119
N+ W++ + + + + L F HL+ P+ + A+ ACAG++ L G
Sbjct: 66 NVHLWNSTLRSYCREKQWEETLRLF---HLMICTAGEAPDNFTIPIALKACAGLRMLELG 122
Query: 120 QQIHAYSLKFG-YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+ IH ++ K S FVG++L+ +Y K G +AL V+ E P+ V + +++ G+ +
Sbjct: 123 KVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQ 182
Query: 179 NQQPEKGFEVF-KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
N PE+ +F ++++ ++ D + + C+ +++ G +H L ++ + + +
Sbjct: 183 NNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLP 242
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+ N+++ LY+K A F + EKD+ISW+T IA ++ + L++F EM
Sbjct: 243 LVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKR 302
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
P+ T S L ACA +++ GK+IH + D V AL++MY KC +
Sbjct: 303 -FEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEA 361
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
LF + ++VVSW +++ +A + + ++ +F M + GI+PD+V + +L A +
Sbjct: 362 VDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSEL 421
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
G+ ++ + ++ G + ++ LI+L + G L +A + K + +D ++ +
Sbjct: 422 GIFQQALCLHGYVVRS-GFNSNVFVGASLIELYSKCGSLGDAVKLFKGM-IVRDVVIWSS 479
Query: 478 LLSA 481
+++A
Sbjct: 480 MIAA 483
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 145/302 (48%), Gaps = 4/302 (1%)
Query: 25 HAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEH 84
HA + G+Q D + +Y ++ A VF+++ W+ MI G G
Sbjct: 740 HAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRF 799
Query: 85 LLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSL 141
L +LE +S+M L P+++ F A+ +CAG+ L +G+ IH + + G ++ FV +L
Sbjct: 800 LSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAAL 859
Query: 142 ISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDR 201
+ MY K G A LV+ + +LVS+ ++I+G+ N + F LM G++P+R
Sbjct: 860 VDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNR 919
Query: 202 FSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRL 261
S L C LRKG H ++ E + V IM +YSK + A F
Sbjct: 920 VSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDE 979
Query: 262 IEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQH 321
KDL+ W+ IA+ K + +F +M GVRP TF +L+AC+ ++
Sbjct: 980 TAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVK-AGVRPSHVTFTCVLSACSHSGLLEE 1038
Query: 322 GK 323
GK
Sbjct: 1039 GK 1040
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 142/280 (50%), Gaps = 17/280 (6%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
L C+ LQ+G +H ++ G D+ V ++++YAKCG + AR VFD+M+ R+L
Sbjct: 825 LKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDL 884
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAY 125
VSW++MISG+ G + L FF M ++PN S + AC + +L KG+ H+Y
Sbjct: 885 VSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSY 944
Query: 126 SLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKG 185
++ G+ V +++ MY K G A ++ E +LV ++A+IA + + K
Sbjct: 945 VIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKA 1004
Query: 186 FEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMAL 245
++F M++ G+ P +F L CS S L +G + +L + FV ++
Sbjct: 1005 IDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYF------QLMTEEFVIARKLSN 1058
Query: 246 YS-KFNLIGEA---EKAFRLIE----EKDLISWNTFIAAC 277
Y+ +L+G A +A LIE E D W + + AC
Sbjct: 1059 YACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGAC 1098
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 2/218 (0%)
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDL 267
+++ N+ R LH K + + F + +LY+K + A K F ++
Sbjct: 8 VDLFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNV 67
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHA 327
WN+ + + +E+ L +F M G PD+FT L ACAGL ++ GK IH
Sbjct: 68 HLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHG 127
Query: 328 HLIRM-RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGG 386
+ + D+ VG+ALV +Y+KCG + + K+F E + V W +++ + +
Sbjct: 128 FAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPE 187
Query: 387 SALKLFEQMKATG-IKPDSVTFIGLLTACNHAGLVKEG 423
AL LF QM + D VT + +++AC VK G
Sbjct: 188 EALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAG 225
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 68/111 (61%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
SI S+L C AL++G H+ V++ G + D++V+ ++++Y+KCG + LAR +FDE
Sbjct: 921 SILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDET 980
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
+ ++LV WSAMI+ + G A++ F QM + P+ F +SAC+
Sbjct: 981 AGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACS 1031
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 9/136 (6%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++ +L S+ QQ + LH V++ G +V V ++ LY+KCG + A K+F
Sbjct: 408 AVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFK 467
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLV 117
M R++V WS+MI+ + G ALE F QM + PN F S +SAC+ +
Sbjct: 468 GMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVE 527
Query: 118 KG-----QQIHAYSLK 128
+G + +H Y L+
Sbjct: 528 EGLKIFDRMVHDYQLR 543
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 186/618 (30%), Positives = 334/618 (54%), Gaps = 50/618 (8%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+S+L C K L+ G +HA ++ G+ + + +L +Y + G + AR++FD+MSE
Sbjct: 14 ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 73
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQI 122
RN+ SW+A++ + G++ ++ F M + P+ ++F AC+ +++ G+ +
Sbjct: 74 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 133
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
+ Y L G+ S V S++ M++K G A + E ++ +N +++G+ +
Sbjct: 134 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 193
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILH--CLTVKCKLESNPFVGN 240
+K VF+ M+ +G+ P+ + A + C+ + LR G +H C+ V+ +L+S+ VGN
Sbjct: 194 KKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE-ELDSDLLVGN 252
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWN----------------------------- 271
+++ Y+K + A + F +I++ DL+SWN
Sbjct: 253 SLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACS 312
Query: 272 --------------TFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
+ I+AC+ L + +EM N V + T S L AC+ LA
Sbjct: 313 VFSELSTRDVVVWNSIISACAQSGRSVNALDLLREM-NLSNVEVNTVTMVSALPACSKLA 371
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
+++ GK+IH +IR L+ + N+L++MY +CG I S ++F+ M R++VSWN +I+
Sbjct: 372 ALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMIS 431
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
+ H G A+ LF+Q + G+KP+ +TF LL+AC+H+GL++EG YF M+ Y +
Sbjct: 432 VYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMD 491
Query: 438 PDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQ 497
P +E + C++DLL RAG+ E E+ +K P + V G+LL ACR+ + + E A+
Sbjct: 492 PAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARY 551
Query: 498 LFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTV 557
LF L+P ++ YVL++N+Y++ G W D A R ++K+ G+ K P S IEV+ F V
Sbjct: 552 LFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVV 611
Query: 558 AEFSHSKIGEINYMLKTL 575
+ SH + +I+ +++L
Sbjct: 612 GDTSHPLMEQISAKMESL 629
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 204/418 (48%), Gaps = 52/418 (12%)
Query: 98 PNE--YIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL 155
P+E I+AS + C + +L G Q+HA + G F+G+ L+ +Y + G DA
Sbjct: 6 PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDAR 65
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN 215
++ + E N+ S+ A++ + E+ ++F LM+ +G+ PD F F + CS
Sbjct: 66 RMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELK 125
Query: 216 DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIA 275
+ R G ++ + E N V +I+ ++ K + A + F IE KD+ WN ++
Sbjct: 126 NYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVS 185
Query: 276 ACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM-RL 334
+ +++K L+VF++M + GV+P+ T AS ++AC L+ ++HG++IH + I++ L
Sbjct: 186 GYTSKGEFKKALNVFRKMVLE-GVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEEL 244
Query: 335 NQDVGVGNALVNMYAKC----------GL------------------------------- 353
+ D+ VGN+LV+ YAKC G+
Sbjct: 245 DSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFF 304
Query: 354 ----ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
I+CS +F+E+ R+VV WN+II+A A +AL L +M + ++ ++VT +
Sbjct: 305 QRMHIACS--VFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVS 362
Query: 410 LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
L AC+ +++G+ + + G+ LID+ GR G + ++ P
Sbjct: 363 ALPACSKLAALRQGKEIHQFIIRC-GLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP 419
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 205/677 (30%), Positives = 337/677 (49%), Gaps = 110/677 (16%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER- 66
+L+ C L+ G +H VLK G +V V N ++++Y KCG + A+KV + M+++
Sbjct: 140 VLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKD 199
Query: 67 ----------------------------------NLVSWSAMISGHHQAGEHLLALEFFS 92
N+V+WSA+I G + ++E F+
Sbjct: 200 CVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFA 259
Query: 93 QM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
+M + P+ AS + AC+ ++ L G+++H Y ++ S FV N+L+ MY + G
Sbjct: 260 RMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCG 319
Query: 150 YSSDALLVYG-----------------------------------EAFEPNLVSFNALIA 174
A ++ E E + +S+N +I+
Sbjct: 320 DMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMIS 379
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
G V+N + +F+ +L +G+ PD F+ L + +R+G +H + + L+S
Sbjct: 380 GHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQS 439
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHC-------------- 280
N FVG ++ +Y K N I A+ AF I E+D +WN I+ + C
Sbjct: 440 NSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMK 499
Query: 281 ---------------------ADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
Y+ + +F EM +RPD +T ILAAC+ LA++
Sbjct: 500 SDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVS-SLRPDIYTVGIILAACSKLATI 558
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
GKQ+HA+ IR + D +G LV+MYAKCG I Y+++N++ + N+V N ++ A+
Sbjct: 559 HRGKQVHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAY 618
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
A H G + +F +M + ++PD VTF+ +L++C HAG +K G F ME TY I+P
Sbjct: 619 AMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLME-TYNITPT 677
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLF 499
++H+TC++DLL RAGKL EA + K P+ D + LL C + ++V +GE A++L
Sbjct: 678 LKHYTCMVDLLSRAGKLDEAYQLIKNMPMEADSVTWSALLGGCFIHKEVALGEIAAEKLI 737
Query: 500 HLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAE 559
L+P+ T YVLL+NLYAS G W D+A R+++ D G++K P S IE + F ++
Sbjct: 738 ELEPSNTGNYVLLANLYASAGRWHDLAKTRELMNDKGMQKSPGCSWIEDRDGVHIFLASD 797
Query: 560 FSHSKIGEINYMLKTLS 576
SH ++ EI +ML L+
Sbjct: 798 KSHQRVEEIYFMLDNLT 814
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 143/507 (28%), Positives = 228/507 (44%), Gaps = 89/507 (17%)
Query: 15 TKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAM 74
+ +L G LH+ +K G V +L +Y+ A +FD+M+ +NL SW+A+
Sbjct: 44 SNSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTLKNLHSWTAV 103
Query: 75 ISGHHQAGEHLLALEFFSQ-----MHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKF 129
+ H G F + + + ++F ++ C G+ L G+Q+H LK
Sbjct: 104 LRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHGMVLKH 163
Query: 130 GYASISFVGNSLISMYMKVGYSSDAL-------------------------LVYG----- 159
G+ + +VGN+LI MY K G +A +VY
Sbjct: 164 GFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALDLL 223
Query: 160 -----EAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVS 214
EPN+V+++A+I GF N + E+F M+ G+ PD + A L CS
Sbjct: 224 ENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSRM 283
Query: 215 NDLRKGMILHCLTVKCKLESNPFVGNTIMALY-------------SKFNL---------- 251
L G LH V+ +L SN FV N ++ +Y SKF
Sbjct: 284 KWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMI 343
Query: 252 --------IGEAEKAFRLIE----EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+G+A++ F +E E+D ISWN I+ ++ L +F+++ + G+
Sbjct: 344 VGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLME-GI 402
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
PD FT SIL A + ++ GK+IH+ I L + VG ALV MY KC I +
Sbjct: 403 EPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQM 462
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
F+E+ R+ +WN +I+ +A G +L E+MK+ G +P+ T+ +L AGL
Sbjct: 463 AFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSIL-----AGL 517
Query: 420 VKEGEAY------FNSMEKTYGISPDI 440
V E + Y FN M+ + + PDI
Sbjct: 518 V-ENKQYDLAMQLFNEMQVS-SLRPDI 542
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 203/456 (44%), Gaps = 75/456 (16%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A++++S+L CS+ K L G LH +++ + + V+N ++ +Y +CG M A K+F
Sbjct: 270 ARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFS 329
Query: 62 EMS-----------------------------------ERNLVSWSAMISGHHQAGEHLL 86
+ + ER+ +SW+ MISGH
Sbjct: 330 KFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDD 389
Query: 87 ALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLIS 143
AL F + + P+ + S ++ A + + +G++IH+ ++ G S SFVG +L+
Sbjct: 390 ALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVE 449
Query: 144 MYMKVGYSSDALLVYGE-----------------------------------AFEPNLVS 168
MY K A + + E FEPN+ +
Sbjct: 450 MYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYT 509
Query: 169 FNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV 228
+N+++AG VEN+Q + ++F M L PD ++ L CS + +G +H ++
Sbjct: 510 WNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHAYSI 569
Query: 229 KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLS 288
+ +S+ +G T++ +Y+K I + + I +L+ N + A + E+G+
Sbjct: 570 RAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIV 629
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMY 348
+F+ M D VRPD TF S+L++C S++ G + + + + +V++
Sbjct: 630 IFRRML-DSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLMETYNITPTLKHYTCMVDLL 688
Query: 349 AKCGLISCSYKLFNEM-LHRNVVSWNTIIAAHANHR 383
++ G + +Y+L M + + V+W+ ++ H+
Sbjct: 689 SRAGKLDEAYQLIKNMPMEADSVTWSALLGGCFIHK 724
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 179/405 (44%), Gaps = 73/405 (18%)
Query: 91 FSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGY 150
FS +H P S I + SL G+Q+H++S+K G+ + +FV L+ MY
Sbjct: 24 FSLLHTPPLTSTTYSTILQSS--NSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSS 81
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP--DRFSFAGGL 208
DA ++ + NL S+ A++ + KGF +F+ L GL D F F L
Sbjct: 82 FEDAWHMFDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVL 141
Query: 209 EICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLI 268
IC DL G +H + +K +N +VGN ++ +Y K + EA+K + +KD +
Sbjct: 142 NICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCV 201
Query: 269 SWNTFIAACSHCADYEKGLSVFKEM--------------------SNDH----------- 297
SWN+ I AC + L + + M SN +
Sbjct: 202 SWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARM 261
Query: 298 ---GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
GV PD T AS+L AC+ + + GK++H +++R L + V NALV MY +CG +
Sbjct: 262 VGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDM 321
Query: 355 SCSYKLFN-----------------------------------EMLHRNVVSWNTIIAAH 379
++K+F+ E + R+ +SWN +I+ H
Sbjct: 322 KSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGH 381
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
++ + AL LF + GI+PDS T +LT +++G+
Sbjct: 382 VDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGK 426
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 2/253 (0%)
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
I SN L G LH ++K ++ FV ++ +YS + +A F + K+L S
Sbjct: 40 ILQSSNSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTLKNLHS 99
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDH-GVRPDDFTFASILAACAGLASVQHGKQIHAH 328
W + + + KG +F+E D G + D F F +L C GL ++ G+Q+H
Sbjct: 100 WTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHGM 159
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
+++ +V VGNAL++MY KCG + + K+ M ++ VSWN+II A + + A
Sbjct: 160 VLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEA 219
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID 448
L L E M + ++P+ VT+ ++ + E F M G++PD ++
Sbjct: 220 LDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGA-GVAPDARTLASVLP 278
Query: 449 LLGRAGKLLEAEE 461
R L +E
Sbjct: 279 ACSRMKWLFVGKE 291
>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
Length = 770
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 188/586 (32%), Positives = 321/586 (54%), Gaps = 22/586 (3%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LLH C +T +L +LH ++K G D+ V+ ++N Y +CG AR +FD+M E+N
Sbjct: 84 LLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKN 143
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
+V+W+A+I+G+ + L ALE F +M P+ Y + ++AC+ + G Q+H
Sbjct: 144 VVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHG 203
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ-PE 183
Y++K+ SI+ +GNSL MY K G A+ + + N++++ +I+ E++ E
Sbjct: 204 YTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTE 263
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
G +F ML G+LP+ F+ + +C DL G + K ++N V N+ M
Sbjct: 264 LGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTM 323
Query: 244 ALYSKFNLIGEAEKAFRLIEEKD---LISWNTFIAACSHCADYEK-----------GLSV 289
LY + GE ++A R EE D +I+WN I+ + + K L V
Sbjct: 324 YLYLR---KGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKV 380
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
F+ + ++PD FTF+SIL+ C+ + +++ G+QIHA I+ DV V +ALVNMY
Sbjct: 381 FRNLKRS-AMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYN 439
Query: 350 KCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
KCG I + K F EM R +V+W ++I+ ++ H A++LFE M+ G++P+ +TF+
Sbjct: 440 KCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVC 499
Query: 410 LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLG 469
+L+AC++AGL ++ E YF+ M++ Y I P ++H+ C++D+ R G+L +A + ++
Sbjct: 500 VLSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFE 559
Query: 470 QDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGAR 529
+ + +L++ CR ++ + A +L L+P YVLL N+Y S+ W DVA R
Sbjct: 560 PNEAIWSSLVAGCRSHGNMELAFYAADRLIELRPKGIETYVLLLNMYISNERWHDVARVR 619
Query: 530 KMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
K++K GL S I ++ F + +H E+ +L+ L
Sbjct: 620 KLMKQEGLGVLMDRSWITIKDKVYFFKANDKTHELSDELYQLLENL 665
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 199/378 (52%), Gaps = 19/378 (5%)
Query: 102 IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA 161
++ + C SL + +H + +K G ++ FV SL++ YM+ G S DA ++ +
Sbjct: 80 MYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQM 139
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
E N+V++ ALI G+ N Q + EVF ML G P ++ L CS SN+ G
Sbjct: 140 PEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGS 199
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
+H T+K + S +GN++ +Y+K + A +AFR++ +K++I+W T I+AC+
Sbjct: 200 QVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDE 259
Query: 282 DY-EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV 340
+Y E GL++F +M D GV P++FT S+++ C + GKQ+ A ++ ++ V
Sbjct: 260 NYTELGLTLFLDMLMD-GVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPV 318
Query: 341 GNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA------------HANHRLGGSA 388
N+ + +Y + G + + F EM ++++WN +I+ HA R G A
Sbjct: 319 KNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSR-GFQA 377
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID 448
LK+F +K + +KPD TF +L+ C+ +++GE KT G D+ + L++
Sbjct: 378 LKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKT-GFLSDVVVNSALVN 436
Query: 449 LLGRAGKLLEAEEYTKKF 466
+ + G + E+ TK F
Sbjct: 437 MYNKCGCI---EDATKAF 451
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 212/430 (49%), Gaps = 29/430 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L+ CS + G +H +K + N + +YAK G + A + F +
Sbjct: 181 TLGAMLNACSASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMV 240
Query: 64 SERNLVSWSAMISGHHQAGEHL-LALEFFSQMHL---LPNEYIFASAISACAGIQSLVKG 119
++N+++W+ MIS + + L L F M + LPNE+ S +S C L G
Sbjct: 241 PDKNVITWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLG 300
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+ A+ K G + V NS + +Y++ G + +A+ + E + +++++NA+I+G+ +
Sbjct: 301 KQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQI 360
Query: 180 QQPEK--------GFE---VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV 228
+ K GF+ VF+ + R + PD F+F+ L +CS L +G +H T+
Sbjct: 361 METAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTI 420
Query: 229 KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLS 288
K S+ V + ++ +Y+K I +A KAF + + L++W + I+ S ++ +
Sbjct: 421 KTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQ 480
Query: 289 VFKEMSNDHGVRPDDFTFASILAAC--AGLAS-VQHGKQIHAHLIRMRLNQDVGVGNALV 345
+F++M GVRP++ TF +L+AC AGLA +H + ++ V +V
Sbjct: 481 LFEDMRF-AGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKE--EYKIEPIVDHYGCMV 537
Query: 346 NMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIA---AHANHRLGGSALKLFEQMKATGIK 401
+M+ + G + ++ N W++++A +H N L A +++ GI+
Sbjct: 538 DMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLIELRPKGIE 597
Query: 402 PDSVTFIGLL 411
T++ LL
Sbjct: 598 ----TYVLLL 603
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 2/224 (0%)
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
MLR+G + L +C + L LH VK ++ FV +++ Y +
Sbjct: 69 MLREGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGA 128
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+A F + EK++++W I + + + L VF EM + G P +T ++L
Sbjct: 129 SQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEML-EAGRYPSHYTLGAMLN 187
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
AC+ + G Q+H + I+ R +GN+L MYAK G + + + F + +NV++
Sbjct: 188 ACSASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVIT 247
Query: 372 WNTIIAAHA-NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
W T+I+A A + L LF M G+ P+ T +++ C
Sbjct: 248 WTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLC 291
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 204/566 (36%), Positives = 322/566 (56%), Gaps = 9/566 (1%)
Query: 19 QQGISLHAAVLKMGIQPD-VIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
++G +HA V++ G+ + V + N ++N+YAK G + A VF+ M E++ VSW+++ISG
Sbjct: 403 RKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISG 462
Query: 78 HHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
Q A E F +M +P+ + S +S+CA + ++ G+QIH LK G +
Sbjct: 463 LDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTD 522
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP-EKGFEVFKLML 193
V N+L+++Y + G ++ L V+ E + VS+N++I +++ + + F M+
Sbjct: 523 VSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMM 582
Query: 194 RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
R G R +F L S + +H L +K L + +GN +++ Y K +
Sbjct: 583 RGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMN 642
Query: 254 EAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
E EK F R+ E +D +SWN+ I+ H K + + M G R D FTFA+IL+A
Sbjct: 643 ECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQ-KGQRLDSFTFATILSA 701
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
CA +A+++ G ++HA IR L DV VG+ALV+MY+KCG I + + F M RNV SW
Sbjct: 702 CASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSW 761
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
N++I+ +A H G ALKLF +M G PD VTF+G+L+AC+H G V+EG +F SM +
Sbjct: 762 NSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSE 821
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA-CRLR-RDVVI 490
Y +SP +EHF+C++DLLGRAGKL E ++ P+ + ++ T+L A CR R+ +
Sbjct: 822 VYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTEL 881
Query: 491 GERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQG 550
G R A+ L L+P YVLL+N+YAS W DVA AR +K++ +KKE S + ++
Sbjct: 882 GRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKD 941
Query: 551 TFEKFTVAEFSHSKIGEINYMLKTLS 576
F + H + I L+ L+
Sbjct: 942 GVHVFVAGDKLHPEKDLIYDKLRELN 967
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 235/474 (49%), Gaps = 20/474 (4%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+++ SL++ + ++ LH +K G ++ +SN ++N+Y + G + A+K+FD
Sbjct: 71 SETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFD 130
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISAC--AGIQSL 116
EMS RNLV+W+ +ISG+ Q G+ A F M +PN Y F SA+ AC +G
Sbjct: 131 EMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGC 190
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMK-VGYSSDALLVYGEAFEPNLVSFNALIAG 175
G QIH K Y S V N LISMY + ++DA V+ N +S+N++I+
Sbjct: 191 KLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISV 250
Query: 176 FVENQQPEKGFEVFKLMLRQGL----LPDRFSFAGGLEICSVSNDLRKGMILHCLTV--K 229
+ +++F M ++GL P+ ++F + S D ++ L K
Sbjct: 251 YSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEK 310
Query: 230 CKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSV 289
+ +V + +++ +++F L +A+ F + ++++S N + E V
Sbjct: 311 SGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKV 370
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQH----GKQIHAHLIRMRLNQD-VGVGNAL 344
F EM + G+ D ++ +L+A + + ++ G+++HAH+IR LN + V +GN L
Sbjct: 371 FHEMKDLVGINSD--SYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGL 428
Query: 345 VNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDS 404
VNMYAK G I+ + +F M+ ++ VSWN++I+ + A + F +M+ TG P +
Sbjct: 429 VNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSN 488
Query: 405 VTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLE 458
T I L++C G + GE K G+ D+ L+ L G E
Sbjct: 489 FTLISTLSSCASLGWIMLGEQIHCDGLK-LGLDTDVSVSNALLALYAETGCFTE 541
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 207/405 (51%), Gaps = 13/405 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S L C+ + G +H LK+G+ DV VSN +L LYA+ G KVF M
Sbjct: 490 TLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLM 549
Query: 64 SERNLVSWSAMISGHHQAGEHL-LALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
E + VSW+++I + + A+++F QM + F + +SA + +
Sbjct: 550 PEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVS 609
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEP-NLVSFNALIAGFVE 178
QIHA LK+ + + +GN+L+S Y K G ++ ++ E + VS+N++I+G++
Sbjct: 610 HQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIH 669
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N+ K ++ M+++G D F+FA L C+ L +GM +H ++ LES+ V
Sbjct: 670 NELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVV 729
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
G+ ++ +YSK I A + F L+ +++ SWN+ I+ + EK L +F M D G
Sbjct: 730 GSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLD-G 788
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKCGLISCS 357
PD TF +L+AC+ + V+ G + + + RL+ V + +V++ + G +
Sbjct: 789 QPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEV 848
Query: 358 YKLFNEM-LHRNVVSWNTIIAA--HANHR---LGGSALKLFEQMK 396
N M + NV+ W T++ A AN R LG A ++ +++
Sbjct: 849 GDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELE 893
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 179/341 (52%), Gaps = 17/341 (4%)
Query: 96 LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL 155
L + F S I+ G + +++H S+K+G+ F+ N+LI++Y+++G A
Sbjct: 67 LFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQ 126
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVS- 214
++ E NLV++ LI+G+ +N +P++ F+ M+R G +P+ ++F L C S
Sbjct: 127 KLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 186
Query: 215 -NDLRKGMILHCLTVKCKLESNPFVGNTIMALY-SKFNLIGEAEKAFRLIEEKDLISWNT 272
+ + G+ +H L K + S+ V N ++++Y S + +A F I ++ ISWN+
Sbjct: 187 PSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNS 246
Query: 273 FIAACSHCADYEKGLSVFKEMSND---HGVRPDDFTFAS-ILAACAGLASVQHG----KQ 324
I+ S D +F M + +P+++TF S I AC +SV G +Q
Sbjct: 247 IISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTAC---SSVDFGLCVLEQ 303
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
+ A + + QD+ V +ALV+ +A+ GL + +F +M RNVVS N ++ +
Sbjct: 304 MLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQ 363
Query: 385 GGSALKLFEQMKA-TGIKPDSVTFIGLLTACNHAGLVKEGE 424
G +A K+F +MK GI DS ++ LL+A + +++EG
Sbjct: 364 GEAAAKVFHEMKDLVGINSDS--YVVLLSAFSEFSVLEEGR 402
>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
Length = 696
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 198/564 (35%), Positives = 320/564 (56%), Gaps = 11/564 (1%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G L + LK G+ +V ++ +L++YAKCG++ AR+VFD M ERN VSW+A+I+G+ +
Sbjct: 112 GAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTE 171
Query: 81 AGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
+G+ ALE F +M L+P+E FAS ++A G + Q+H +K+G A V
Sbjct: 172 SGDMASALELFLEMEREGLVPDEATFASLLTAVEGPSCFLM-HQLHGKIVKYGSALGLTV 230
Query: 138 GNSLISMYMKVGYSSDALLVY-GEAFEPNLVSFNALIAGFVENQQPEKGFEVF-KLMLRQ 195
N+ I+ Y + G D+ ++ G +L+S+NA++ + N ++ + F ++M
Sbjct: 231 LNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQES 290
Query: 196 GLLPDRFSFAGGLEICSV-SNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN---L 251
G+ PD +SF + CS +D +G ++H L +K LE V N ++A+Y+++N +
Sbjct: 291 GVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCM 350
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ +A K F + KD +SWN+ + S L F+ M +++ VR D++ F++ L
Sbjct: 351 MEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSEN-VRTDEYAFSAALR 409
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
+ + LA +Q GKQIH +I + V ++L+ MY+K G+I + K F E + V
Sbjct: 410 SSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVP 469
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
WN +I +A H + LF +M D +TF+GL+T+C+HAGLV EG N+ME
Sbjct: 470 WNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTME 529
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
YG+ +EH+ C +DL GRAG+L +A++ P D +V TLL ACR+ +V +
Sbjct: 530 TKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELA 589
Query: 492 ERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGT 551
+A LF +P S YVLLS++Y+ GMW D A ++++K GL K P +S+IEV+
Sbjct: 590 SDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSLIEVKNE 649
Query: 552 FEKFTVAEFSHSKIGEINYMLKTL 575
F + SH K+ EI ML+ L
Sbjct: 650 VHSFNAEDKSHPKMDEIYEMLRVL 673
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 206/410 (50%), Gaps = 12/410 (2%)
Query: 25 HAAVLKMGIQPDVIVSNHVLNLYAKCGK--MILARKVFDEMSERNLVSWSAMISGHHQAG 82
HA++LK G N +L Y++ + AR+VFDE+ R+ VSW+A+++ H +G
Sbjct: 14 HASLLKSGFAAPTPW-NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHAASG 72
Query: 83 EHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
H A MH L N + SA+ + A + G Q+ + +LK G A+ F +
Sbjct: 73 AHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAAS 132
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
+L+ +Y K G DA V+ E N VS+NALIAG+ E+ E+F M R+GL+P
Sbjct: 133 ALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLVP 192
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
D +FA L + LH VK V N + YS+ + ++ + F
Sbjct: 193 DEATFASLLTAVEGPSCFLMHQ-LHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIF 251
Query: 260 RLIEE-KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
I + +DLISWN + A +H ++ + F M + GV PD ++F SI+++C+
Sbjct: 252 DGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGH 311
Query: 319 VQH-GKQIHAHLIRMRLNQDVGVGNALVNMYAKCG---LISCSYKLFNEMLHRNVVSWNT 374
H G+ IH +I+ L V NAL+ MY + ++ +YK FN ++ ++ VSWN+
Sbjct: 312 DDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNS 371
Query: 375 IIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
++ ++ H L ALK F M + ++ D F L + + +++ G+
Sbjct: 372 MLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGK 421
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 13/202 (6%)
Query: 236 PFVGNTIMALYSKFNLIG--EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
P N ++ YS+ + G A + F + +D +SWN +AA + + + + + M
Sbjct: 25 PTPWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHAASGAHPEAWRLLRAM 84
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
+ G+ + F S L + A G Q+ + ++ L +V +AL+++YAKCG
Sbjct: 85 -HAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGR 143
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ + ++F+ M RN VSWN +IA + SAL+LF +M+ G+ PD TF LLTA
Sbjct: 144 VRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLVPDEATFASLLTA 203
Query: 414 CN----------HAGLVKEGEA 425
H +VK G A
Sbjct: 204 VEGPSCFLMHQLHGKIVKYGSA 225
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 194/573 (33%), Positives = 315/573 (54%), Gaps = 8/573 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
SSLL H + L Q +HA ++ G+ + +N G++ ARKVFDE E
Sbjct: 75 SSLLDHSVHKRHLNQ---IHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPE 131
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
++ W+A+I G+ A+E +S+M + P+ + + AC+G+ L G+++
Sbjct: 132 PSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRV 191
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H + G+ S FV N L+++Y K G A +V+ + N+VS+ ++I+G+ +N P
Sbjct: 192 HGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLP 251
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
+ +F M ++ + PD + L + DL +G +H VK LE P + ++
Sbjct: 252 MEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISL 311
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
A+Y+K + A F +E +++ WN I+ + + + +F+EM + + +R D
Sbjct: 312 TAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKN-IRTD 370
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
T S + ACA + S+ K + ++ + DV V AL++M+AKCG + + ++F+
Sbjct: 371 SITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFD 430
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
L ++VV W+ +I + H G A+ LF MK G+ P+ VTF+GLLTACNH+GLV+E
Sbjct: 431 RTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEE 490
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G F+SM K YGI +H+ C++DLLGR+G L EA ++ P+ V G LL AC
Sbjct: 491 GWELFHSM-KYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGAC 549
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
++ R V +GE A+QLF L P T YV LSNLYAS +W VA R ++++ GL K+
Sbjct: 550 KIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLG 609
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
YS+IE+ G + F V + SH + EI L++L
Sbjct: 610 YSLIEINGKLQAFRVGDKSHPRFKEIFEELESL 642
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 182/384 (47%), Gaps = 5/384 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ +L CS L+ G +H + ++G + DV V N ++ LYAKCG++ AR VF+ +
Sbjct: 171 TLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGL 230
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+RN+VSW++MISG+ Q G + AL F QM ++ P+ S + A ++ L +G+
Sbjct: 231 DDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGK 290
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IH +K G + SL +MY K G A + + PN++ +NA+I+G+ +N
Sbjct: 291 SIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNG 350
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ +F+ M+ + + D + + C+ L + K + ++ FV
Sbjct: 351 YTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNT 410
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +++K + A + F +KD++ W+ I + + +F M GV
Sbjct: 411 ALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQ-AGVC 469
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P+D TF +L AC V+ G ++ + + +V++ + G ++ +Y
Sbjct: 470 PNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDF 529
Query: 361 FNEM-LHRNVVSWNTIIAAHANHR 383
M + V W ++ A +R
Sbjct: 530 ITTMPIEPGVSVWGALLGACKIYR 553
>gi|224141133|ref|XP_002323929.1| predicted protein [Populus trichocarpa]
gi|222866931|gb|EEF04062.1| predicted protein [Populus trichocarpa]
Length = 770
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 202/566 (35%), Positives = 319/566 (56%), Gaps = 18/566 (3%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G+ LH+ ++K G +V V N ++++Y++ G ++ AR+VF+EM R+LVSW+AMISG+ Q
Sbjct: 183 GLQLHSCIVKFGFDCEVFVGNALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMISGYSQ 242
Query: 81 AGEH-LLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF 136
G + L A+ F QM + + F SA+SAC ++L +QIH S+K +
Sbjct: 243 EGIYGLEAISMFLQMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKHVA 302
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
V N LIS Y K DA LV+ E N+VS+ +I+ + F M G
Sbjct: 303 VSNVLISTYFKCQVIEDARLVFQNMNERNVVSWTTMIS-----IDEAEAVSFFNEMRLDG 357
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
+ P+ +F G + ++ + +G ++H K S V N+I+ +Y+KF + ++
Sbjct: 358 VYPNDVTFVGLIHAITIGELVVQGKMVHGFCTKTGFSSKSNVCNSIITMYAKFKSMQDSV 417
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA--CA 314
K F+ ++ +D+I+WN I+ H ++ + F S +P+ ++F SIL A A
Sbjct: 418 KVFQELKYQDIIAWNALISGFVHNGLCQEAIRAF--FSGLIESKPNQYSFGSILNAIGAA 475
Query: 315 GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNT 374
S+++G++ H+ +I++ LN D V +AL++MYAK G I S K+F E ++ +W T
Sbjct: 476 EDVSLKYGQRCHSQIIKLGLNTDPIVSSALLDMYAKRGSICESQKVFVETPQQSQFAWTT 535
Query: 375 IIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTY 434
II+A+A H S + FE+M+ ++PDS+TF+ +LTAC G+V G F SM K Y
Sbjct: 536 IISAYARHGDYESVMNWFEEMRRLEVRPDSITFLSILTACGRRGMVDMGCHLFGSMVKDY 595
Query: 435 GISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERL 494
I P EH++CL+D+LGRAG+L EAE P G VL +LL ACR+ +V +GER+
Sbjct: 596 QIEPSAEHYSCLVDMLGRAGRLEEAERLMSHIPGGPGLSVLQSLLGACRVHGNVDMGERV 655
Query: 495 AKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQG---- 550
A L ++PT + YVL+SNLYA G W VA RK ++ G+KKE +S ++V G
Sbjct: 656 ADALMEMEPTESGSYVLMSNLYAEIGKWEMVAKVRKRMRVKGVKKEVGFSWVDVGGIDSS 715
Query: 551 -TFEKFTVAEFSHSKIGEINYMLKTL 575
+ F+ + SH + I M + L
Sbjct: 716 LSLHGFSSGDTSHPQSEAICRMAECL 741
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/458 (28%), Positives = 241/458 (52%), Gaps = 30/458 (6%)
Query: 37 VIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH- 95
IVSN ++N+Y K G+ A +F+ ++ ++VSW+ ++SG + + A F +M+
Sbjct: 99 TIVSNSLMNMYCKSGQFCKALCIFENLTHPDIVSWNTVLSGCQTSED---AFSFACKMNS 155
Query: 96 --LLPNEYIFASAISAC-AGIQS-LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
++ + + + +S C +++ + G Q+H+ +KFG+ FVGN+LISMY + G+
Sbjct: 156 SGVVFDAVTYTTVLSFCWRHVEAYFLIGLQLHSCIVKFGFDCEVFVGNALISMYSRWGHL 215
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE---VFKLMLRQGLLPDRFSFAGGL 208
+A V+ E +LVS+NA+I+G+ +Q+ G E +F M R G+ DR SF +
Sbjct: 216 VEARRVFEEMKTRDLVSWNAMISGY--SQEGIYGLEAISMFLQMFRGGMELDRISFTSAV 273
Query: 209 EICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLI 268
C +L +H L++K + E + V N +++ Y K +I +A F+ + E++++
Sbjct: 274 SACGYEKNLELARQIHGLSIKTRHEKHVAVSNVLISTYFKCQVIEDARLVFQNMNERNVV 333
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
SW T I+ D + +S F EM D GV P+D TF ++ A V GK +H
Sbjct: 334 SWTTMIS-----IDEAEAVSFFNEMRLD-GVYPNDVTFVGLIHAITIGELVVQGKMVHGF 387
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
+ + V N+++ MYAK + S K+F E+ ++++++WN +I+ ++ L A
Sbjct: 388 CTKTGFSSKSNVCNSIITMYAKFKSMQDSVKVFQELKYQDIIAWNALISGFVHNGLCQEA 447
Query: 389 LKLFEQMKATGI---KPDSVTFIGLLTACNHAGLV--KEGEAYFNSMEKTYGISPDIEHF 443
++ F +G+ KP+ +F +L A A V K G+ + + K G++ D
Sbjct: 448 IRAF----FSGLIESKPNQYSFGSILNAIGAAEDVSLKYGQRCHSQIIK-LGLNTDPIVS 502
Query: 444 TCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+ L+D+ + G + E+++ + P Q T++SA
Sbjct: 503 SALLDMYAKRGSICESQKVFVETP-QQSQFAWTTIISA 539
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 193/388 (49%), Gaps = 27/388 (6%)
Query: 49 KCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAIS 108
K G+ A + D+ RNL EHLL+ F + + +E+ A+A+
Sbjct: 28 KTGESSHAHNLLDKTPHRNL--------SFQIIKEHLLS-GFINNI----DEFTVANALK 74
Query: 109 ACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVS 168
AC G L G QIH +S+ + +++ V NSL++MY K G AL ++ P++VS
Sbjct: 75 ACRGYPLL--GSQIHGFSIIHEFVNVTIVSNSLMNMYCKSGQFCKALCIFENLTHPDIVS 132
Query: 169 FNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC--SVSNDLRKGMILHCL 226
+N +++G Q E F M G++ D ++ L C V G+ LH
Sbjct: 133 WNTVLSGC---QTSEDAFSFACKMNSSGVVFDAVTYTTVLSFCWRHVEAYFLIGLQLHSC 189
Query: 227 TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYE-K 285
VK + FVGN ++++YS++ + EA + F ++ +DL+SWN I+ S Y +
Sbjct: 190 IVKFGFDCEVFVGNALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMISGYSQEGIYGLE 249
Query: 286 GLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALV 345
+S+F +M G+ D +F S ++AC +++ +QIH I+ R + V V N L+
Sbjct: 250 AISMFLQMFRG-GMELDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKHVAVSNVLI 308
Query: 346 NMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV 405
+ Y KC +I + +F M RNVVSW T+I+ A+ F +M+ G+ P+ V
Sbjct: 309 STYFKCQVIEDARLVFQNMNERNVVSWTTMISIDE-----AEAVSFFNEMRLDGVYPNDV 363
Query: 406 TFIGLLTACNHAGLVKEGEAYFNSMEKT 433
TF+GL+ A LV +G+ KT
Sbjct: 364 TFVGLIHAITIGELVVQGKMVHGFCTKT 391
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 189/370 (51%), Gaps = 19/370 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S +S + C K L+ +H +K + V VSN +++ Y KC + AR VF M
Sbjct: 268 SFTSAVSACGYEKNLELARQIHGLSIKTRHEKHVAVSNVLISTYFKCQVIEDARLVFQNM 327
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+ERN+VSW+ MIS + A+ FF++M L PN+ F I A + +V+G+
Sbjct: 328 NERNVVSWTTMIS-----IDEAEAVSFFNEMRLDGVYPNDVTFVGLIHAITIGELVVQGK 382
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H + K G++S S V NS+I+MY K D++ V+ E +++++NALI+GFV N
Sbjct: 383 MVHGFCTKTGFSSKSNVCNSIITMYAKFKSMQDSVKVFQELKYQDIIAWNALISGFVHNG 442
Query: 181 QPEKGFEVFKLMLRQGLL---PDRFSFAGGLEICSVSND--LRKGMILHCLTVKCKLESN 235
++ F GL+ P+++SF L + D L+ G H +K L ++
Sbjct: 443 LCQEAIRAF----FSGLIESKPNQYSFGSILNAIGAAEDVSLKYGQRCHSQIIKLGLNTD 498
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
P V + ++ +Y+K I E++K F ++ +W T I+A + DYE ++ F+EM
Sbjct: 499 PIVSSALLDMYAKRGSICESQKVFVETPQQSQFAWTTIISAYARHGDYESVMNWFEEMRR 558
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR-MRLNQDVGVGNALVNMYAKCGLI 354
VRPD TF SIL AC V G + +++ ++ + LV+M + G +
Sbjct: 559 LE-VRPDSITFLSILTACGRRGMVDMGCHLFGSMVKDYQIEPSAEHYSCLVDMLGRAGRL 617
Query: 355 SCSYKLFNEM 364
+ +L + +
Sbjct: 618 EEAERLMSHI 627
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 193/566 (34%), Positives = 310/566 (54%), Gaps = 5/566 (0%)
Query: 13 SKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWS 72
+ T AL+ +H K G D+ V N ++++YAKCG + AR VFD M +R+++SW+
Sbjct: 245 TSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWN 304
Query: 73 AMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKF 129
AMI G Q G A F +M +P+ + S ++ + +++H ++++
Sbjct: 305 AMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEV 364
Query: 130 GYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVF 189
G S VG++ + MY++ G DA L++ + N+ ++NA+I G + + + +F
Sbjct: 365 GLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLF 424
Query: 190 KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF 249
M R+G PD +F L L +H + L + VGN ++ +Y+K
Sbjct: 425 LQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVHMYAKC 483
Query: 250 NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
A++ F + E+++ +W I+ + + S+F +M + G+ PD T+ SI
Sbjct: 484 GNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLRE-GIVPDATTYVSI 542
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
L+ACA +++ K++H+H + L D+ VGNALV+MYAKCG + + ++F++ML R+V
Sbjct: 543 LSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDV 602
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNS 429
SW +I A H G AL LF +MK G KP+ +F+ +L+AC+HAGLV EG F S
Sbjct: 603 YSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLS 662
Query: 430 MEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVV 489
+ + YGI P +EH+TC++DLLGRAG+L EA+ + P+ G LL AC ++
Sbjct: 663 LTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLE 722
Query: 490 IGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQ 549
+ E AK+ L+P + S YVLLSN+YA+ G W R M++ G++KEP S IEV
Sbjct: 723 MAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVD 782
Query: 550 GTFEKFTVAEFSHSKIGEINYMLKTL 575
F V + SH + EI LK L
Sbjct: 783 NQIHSFVVGDTSHPESKEIYAKLKDL 808
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 129/412 (31%), Positives = 221/412 (53%), Gaps = 6/412 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C +L+ G +HA +++ G Q DV V ++N+Y KCG + A+ +FD+M ER
Sbjct: 35 SILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVER 94
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
N++SW+ MI G G A F QM +PN Y + S ++A A +L +++H
Sbjct: 95 NVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVH 154
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
++++ G A VGN+L+ MY K G DA +V+ E ++ S+ +I G ++ + +
Sbjct: 155 SHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQ 214
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSND--LRKGMILHCLTVKCKLESNPFVGNT 241
+ F +F M R G LP+ ++ L ++++ L +H K S+ VGN
Sbjct: 215 EAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNA 274
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y+K I +A F + ++D+ISWN I + + ++F +M + G P
Sbjct: 275 LIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQE-GFVP 333
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D T+ S+L + + K++H H + + L D+ VG+A V+MY +CG I + +F
Sbjct: 334 DSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIF 393
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+++ RNV +WN +I A + G AL LF QM+ G PD+ TF+ +L+A
Sbjct: 394 DKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSA 445
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 180/344 (52%), Gaps = 6/344 (1%)
Query: 74 MISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFG 130
MI G+ + G A++ +SQM PNE + S + AC SL G++IHA+ ++ G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 131 YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFK 190
+ S V +L++MY+K G DA L++ + E N++S+ +I G + ++ F F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 191 LMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN 250
M R+G +P+ +++ L + + L +H V L + VGN ++ +Y+K
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 251 LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
I +A F + E+D+ SW I + ++ S+F +M G P+ T+ SIL
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERG-GCLPNLTTYLSIL 239
Query: 311 AACA--GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
A A +++ K++H H + D+ VGNAL++MYAKCG I + +F+ M R+
Sbjct: 240 NASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRD 299
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
V+SWN +I A + G A +F +M+ G PDS T++ LL
Sbjct: 300 VISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLN 343
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 100/180 (55%), Gaps = 8/180 (4%)
Query: 284 EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA 343
E + V+ +M + G +P++ T+ SIL AC S++ GK+IHAH+I+ DV V A
Sbjct: 12 EDAMKVYSQMRREGG-QPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETA 70
Query: 344 LVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPD 403
LVNMY KCG I + +F++M+ RNV+SW +I A++ G A F QM+ G P+
Sbjct: 71 LVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPN 130
Query: 404 SVTFIGLLTACNHAG---LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
S T++ +L A AG VKE +S G++ D+ L+ + ++G + +A
Sbjct: 131 SYTYVSILNANASAGALEWVKE----VHSHAVNAGLALDLRVGNALVHMYAKSGSIDDAR 186
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + S+L C+ T AL+ +H+ + G+ D+ V N ++++YAKCG + AR+VFD
Sbjct: 536 ATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFD 595
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACA 111
+M ER++ SW+ MI G Q G L AL+ F +M L PN Y F + +SAC+
Sbjct: 596 DMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACS 648
>gi|297744484|emb|CBI37746.3| unnamed protein product [Vitis vinifera]
Length = 2090
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 191/566 (33%), Positives = 314/566 (55%), Gaps = 8/566 (1%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
+H C A+++G+ +H +++ G V N +L++YA M A ++FDEM ER++
Sbjct: 143 IHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCERDV 201
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
+SWS MI G+ Q GE +AL+ F +M + + S + ACA + G+ +H
Sbjct: 202 ISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHG 261
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ G FVGNS+I MY K A + E N VS+N++I+G V ++ +
Sbjct: 262 VVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSE 321
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
+F M + G D + L+ C D + +H + ++ E N FV N+++
Sbjct: 322 ALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLID 381
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
YSK +LI A K F ++ KD +SW+ IA +HC ++ +++F+EM N +P+
Sbjct: 382 AYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEM-NQAQEKPNGV 440
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T S+L A + A ++ K H IR L +V VG A+++MYAKCG I S K F+++
Sbjct: 441 TILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQI 500
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+N+VSW +IAA + L AL L +MK G+KP+ VT + +L+AC+H GLV+EG
Sbjct: 501 PEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGL 560
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP--LGQDPIVLGTLLSAC 482
++F +M + +G+ P +EH++C++D+L RAGKL A +K P + + G LLSAC
Sbjct: 561 SFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSAC 620
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
R + +G A ++ L+P +++ Y L S++YA+ G+W D A R ++K G++
Sbjct: 621 RSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGLWADAARMRWLVKARGVRVVAG 680
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEI 568
YS++ V+ +F + SH + GEI
Sbjct: 681 YSLVHVEDKAWRFVAGDESHPRAGEI 706
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 245/481 (50%), Gaps = 14/481 (2%)
Query: 41 NHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL--- 97
N VL+ Y K G + A VFD M R+ VSW+ MI GH G L +F Q ++
Sbjct: 74 NSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFE 133
Query: 98 PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV 157
PN AI AC + ++ +G ++H Y ++ G+ I V NSL+SMY A +
Sbjct: 134 PNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYADNDMER-AEEL 192
Query: 158 YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP-DRFSFAGGLEICSVSND 216
+ E E +++S++ +I G+V+ + + ++F M + D + L+ C+ + D
Sbjct: 193 FDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGD 252
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
+ G +H + + L+ + FVGN+I+ +YSK + A KAF + ++ +SWN+ I+
Sbjct: 253 ISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISG 312
Query: 277 CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
+ + LS+F M G R D+ T ++L +C K IH+ +IR
Sbjct: 313 LVRTEKHSEALSLFYSMGK-AGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYEL 371
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
+ V N+L++ Y+KC LI ++KLF+ + ++ VSW+ +IA + A+ LF++M
Sbjct: 372 NEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMN 431
Query: 397 ATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
KP+ VT + LL A + + +K + + + + G++ ++ T ++D+ + G++
Sbjct: 432 QAQEKPNGVTILSLLEAFSVSADLKRSK-WAHGIAIRRGLAAEVAVGTAILDMYAKCGEI 490
Query: 457 LEAEEYTKKFPLGQDPIVLGTLLSAC---RLRRDVVIGERLAKQLFH-LQPTTTSPYVLL 512
+ + + P ++ + G +++AC L RD + L++ H L+P + +L
Sbjct: 491 GLSRKAFDQIP-EKNIVSWGAMIAACGMNGLARDAL--ALLSEMKLHGLKPNVVTTLSVL 547
Query: 513 S 513
S
Sbjct: 548 S 548
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 202/406 (49%), Gaps = 22/406 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+L C+ T + G S+H V+ G+ D+ V N ++++Y+KC A K F+EM
Sbjct: 239 TMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEM 298
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
RN VSW+++ISG + +H AL F M +E + + +C + +
Sbjct: 299 PCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCK 358
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IH+ +++GY FV NSLI Y K A ++ + VS++A+IAGF
Sbjct: 359 FIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCG 418
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+P++ +F+ M + P+ + LE SVS DL++ H + ++ L + VG
Sbjct: 419 KPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGT 478
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
I+ +Y+K IG + KAF I EK+++SW IAAC L++ EM HG++
Sbjct: 479 AILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEM-KLHGLK 537
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNAL------VNMYAKCGLI 354
P+ T S+L+AC+ V+ G +++ QD GV L V+M ++ G +
Sbjct: 538 PNVVTTLSVLSACSHGGLVEEGLSFFENMV-----QDHGVEPGLEHYSCMVDMLSRAGKL 592
Query: 355 SCSYKLFNEMLHR---NVVSWNTIIAA---HANHRLG-GSALKLFE 393
+ + L +M R W +++A N RLG G+A ++ E
Sbjct: 593 NSAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAFRVLE 638
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 146/287 (50%), Gaps = 1/287 (0%)
Query: 130 GYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVF 189
G+ S++ GNS++ YMK G AL V+ + VS+N +I G + +KG F
Sbjct: 65 GFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWF 124
Query: 190 KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF 249
+ P+ + + C + +G+ +H ++ P V N+++++Y+
Sbjct: 125 RQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD- 183
Query: 250 NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
N + AE+ F + E+D+ISW+ I + + L +F EM+++ + D T S+
Sbjct: 184 NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSV 243
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
L ACA + G+ +H +I L+ D+ VGN++++MY+KC ++K FNEM RN
Sbjct: 244 LKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNT 303
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
VSWN+II+ AL LF M G + D VT + LL +C +
Sbjct: 304 VSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKY 350
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 64/159 (40%), Gaps = 17/159 (10%)
Query: 267 LISWNTFIAACSH--CADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ 324
L +WN I ++ D + S + +M D SIL AC+ L
Sbjct: 12 LPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKACSSLPG------ 65
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
+ GN++++ Y K G + + +F+ M R+ VSWN +I H +
Sbjct: 66 ---------FDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGA 116
Query: 385 GGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
L F Q + +P+ T + + AC G ++EG
Sbjct: 117 SDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEG 155
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 200/582 (34%), Positives = 318/582 (54%), Gaps = 19/582 (3%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE-RN 67
L C ++L+ GI +H V+ ++ D VSN +LN+Y KCG + A++VF +M RN
Sbjct: 65 LGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRN 124
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHA 124
++SWS M H G AL F M LL + + +SAC+ + G+ IH+
Sbjct: 125 VISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHS 184
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEP--NLVSFNALIAGFVENQQP 182
G+ S V N++++MY + G +A V+ E ++VS+N +++ +V N
Sbjct: 185 CIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHN--- 241
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
++G + +L R L PD+ ++ L CS + D+ G +LH V +LE N VGN +
Sbjct: 242 DRGKDAIQLYQRMQLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNAL 301
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA-------CSHCADYEKGLSVFKEMSN 295
+++Y+K EA F +E++ +ISW T I+A C +++ L + K S+
Sbjct: 302 VSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSS 361
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
V+PD F +IL ACA +++++ GK + L+ D VG A+VN+Y KCG I
Sbjct: 362 QR-VKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIE 420
Query: 356 CSYKLFNEMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ ++F+ + R +V WN +IA +A ALKLF +M+ G++PDS +F+ +L AC
Sbjct: 421 EARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLAC 480
Query: 415 NHAGLVKEGEAYFNSMEKTY-GISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
+H GL +G++YF SM Y ++ I+HF C+ DLLGR G+L EAEE+ +K P+ D +
Sbjct: 481 SHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAV 540
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
+LL+ACR RD+ + +A +L L+P + YV LSN+YA W VA RK +
Sbjct: 541 AWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMA 600
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ G+KKE S IE+ F + +H + EI L L
Sbjct: 601 EQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKL 642
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 218/429 (50%), Gaps = 18/429 (4%)
Query: 46 LYAKCGKMILARKVFDEMSERNLVSWSAMISG---HHQAGEHLLALEFFSQMHLLPNEYI 102
+YA C A+ FD + +RNL SW+ +++ Q+ E L ALE Q + P+
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
F +A+ +C +SL G +IH + V N+L++MY K G S A V+ +
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120
Query: 163 EP-NLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
N++S++ + + + F+ ML G+ + + L CS ++ G
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE--KDLISWNTFIAACSH 279
++H ES V N +M +Y + + EA K F ++E +D++SWN ++ H
Sbjct: 181 MIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVH 240
Query: 280 CADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG 339
+ + +++ M +RPD T+ S+L+AC+ V G+ +H ++ L ++V
Sbjct: 241 NDRGKDAIQLYQRMQ----LRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVI 296
Query: 340 VGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM---- 395
VGNALV+MYAKCG + + +F++M R+++SW TII+A+ RL A LF+QM
Sbjct: 297 VGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELE 356
Query: 396 ---KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
+ +KPD++ F+ +L AC +++G+ + + G+S D T +++L G+
Sbjct: 357 KNGSSQRVKPDALAFVTILNACADVSALEQGK-MVSEQAASCGLSSDKAVGTAVVNLYGK 415
Query: 453 AGKLLEAEE 461
G++ EA
Sbjct: 416 CGEIEEARR 424
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 182/375 (48%), Gaps = 19/375 (5%)
Query: 144 MYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFS 203
MY DA + + NL S+ L+A F + Q ++ + M + G+ PD +
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 204 FAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIE 263
F L C LR G+ +H + V +LE +P V N ++ +Y K + A++ F +E
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120
Query: 264 E-KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG 322
+++ISW+ A + + + L F+ M G++ +IL+AC+ A VQ G
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLL-LGIKATKSAMVTILSACSSPALVQDG 179
Query: 323 KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH--RNVVSWNTIIAAHA 380
+ IH+ + ++ V NA++ MY +CG + + K+F+ M R+VVSWN +++ +
Sbjct: 180 RMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYV 239
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA-----GLVKEGEAYFNSMEKTYG 435
++ G A++L+++M+ ++PD VT++ LL+AC+ A G V + + +EK
Sbjct: 240 HNDRGKDAIQLYQRMQ---LRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVI 296
Query: 436 ISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLA 495
+ L+ + + G EA K + I T++SA RR V L
Sbjct: 297 VG------NALVSMYAKCGSHTEARAVFDKME-QRSIISWTTIISAYVRRRLVAEACHLF 349
Query: 496 KQLFHLQPTTTSPYV 510
+Q+ L+ +S V
Sbjct: 350 QQMLELEKNGSSQRV 364
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 207/590 (35%), Positives = 317/590 (53%), Gaps = 32/590 (5%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+S+L C+ L+ G LHA LK D IV L++YAKC M A+ +FD+
Sbjct: 243 ASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSEN 302
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
N S++AMI+G+ Q AL F ++ L +E + ACA ++ L +G QI
Sbjct: 303 LNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQI 362
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
+ ++K + V N+ I MY K ++A V+ E + VS+NA+IA ++Q
Sbjct: 363 YDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA---HEQN 419
Query: 183 EKGFE---VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
KG+E +F MLR + PD F+F L+ C+ L GM +H VK + SN VG
Sbjct: 420 GKGYETLFLFVSMLRSRIEPDEFTFGSVLKACT-GGSLGYGMEIHSSIVKSGMASNSSVG 478
Query: 240 NTIMALYSKFNLIGEAEKAF-RLIEEKDL-------------------ISWNTFIAACSH 279
+++ +YSK +I EAEK R + ++ +SWN+ I+
Sbjct: 479 CSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVM 538
Query: 280 CADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG 339
E +F M + G+ PD FT+A++L CA LAS GKQIHA +I+ L DV
Sbjct: 539 KEQSEDAQMLFTRMM-EMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVY 597
Query: 340 VGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG 399
+ + LV+MY+KCG + S +F + L R+ V+WN +I +A+H G A++LFE+M
Sbjct: 598 ISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILEN 657
Query: 400 IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
IKP+ VTFI +L AC H GL+ +G YF M++ YG+ P + H++ ++D+LG++GK+ A
Sbjct: 658 IKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRA 717
Query: 460 EEYTKKFPLGQDPIVLGTLLSACRL-RRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYAS 518
E ++ P D ++ TLL C + R +V + E L L P +S Y LLSN+YA
Sbjct: 718 LELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYAD 777
Query: 519 DGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
GMW V+ R+ ++ LKKEP S +E++ F V + +H + EI
Sbjct: 778 AGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEI 827
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 140/480 (29%), Positives = 245/480 (51%), Gaps = 32/480 (6%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++ + +L CS + G+ +H V+++G DV+ ++ +L++YAK + + + +VF
Sbjct: 139 RTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQG 198
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKG 119
+ E+N VSWSA+I+G Q LAL+FF +M + ++ I+AS + +CA + L G
Sbjct: 199 IPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLG 258
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
Q+HA++LK +A+ V + + MY K DA +++ ++ N S+NA+I G+ +
Sbjct: 259 GQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQE 318
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ K +F ++ GL D S +G C++ L +G+ ++ L +K L + V
Sbjct: 319 EHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVA 378
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N + +Y K + EA + F + +D +SWN IAA + L +F M +
Sbjct: 379 NAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSR-I 437
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS-- 357
PD+FTF S+L AC G S+ +G +IH+ +++ + + VG +L++MY+KCG+I +
Sbjct: 438 EPDEFTFGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEK 496
Query: 358 ------------------YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG 399
K+ N+ L VSWN+II+ + A LF +M G
Sbjct: 497 IHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMG 556
Query: 400 IKPDSVTFIGLLTACNH---AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
I PD T+ +L C + AGL K+ A E + D+ + L+D+ + G L
Sbjct: 557 ITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE----LQSDVYISSTLVDMYSKCGDL 612
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 142/490 (28%), Positives = 236/490 (48%), Gaps = 37/490 (7%)
Query: 11 HCSKTKALQQGISLHAAVLKMGIQP-------------------------------DVIV 39
C+K AL+ G HA ++ G +P DV+
Sbjct: 15 ECAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVS 74
Query: 40 SNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPN 99
N ++N YAK M+ A F+ M R++VSW++M+SG+ Q GE L ++E F M
Sbjct: 75 WNKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGT 134
Query: 100 EY---IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALL 156
E+ FA + C+ ++ G QIH ++ G + ++L+ MY K ++L
Sbjct: 135 EFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLR 194
Query: 157 VYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSND 216
V+ E N VS++A+IAG V+N + FK M + + +A L C+ ++
Sbjct: 195 VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 254
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
LR G LH +K ++ V + +Y+K + + +A+ F E + S+N I
Sbjct: 255 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITG 314
Query: 277 CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
S K L +F + + G+ D+ + + + ACA + + G QI+ I+ L+
Sbjct: 315 YSQEEHGFKALLLFHRLMSS-GLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSL 373
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
DV V NA ++MY KC ++ ++++F+EM R+ VSWN IIAAH + G L LF M
Sbjct: 374 DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML 433
Query: 397 ATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+ I+PD TF +L AC G + G +S+ K+ G++ + LID+ + G +
Sbjct: 434 RSRIEPDEFTFGSVLKACT-GGSLGYGMEIHSSIVKS-GMASNSSVGCSLIDMYSKCGMI 491
Query: 457 LEAEEYTKKF 466
EAE+ +F
Sbjct: 492 EEAEKIHSRF 501
>gi|15228265|ref|NP_190368.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207726|sp|Q9STS9.1|PP268_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g47840
gi|4741201|emb|CAB41867.1| putative protein [Arabidopsis thaliana]
gi|332644818|gb|AEE78339.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 706
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 193/572 (33%), Positives = 311/572 (54%), Gaps = 4/572 (0%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+S +L C ++ + G SLHA +K + V V + +L++Y + GK+ + +VF EM
Sbjct: 111 LSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMP 170
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQ 121
RN V+W+A+I+G AG + L +FS+M L + Y FA A+ ACAG++ + G+
Sbjct: 171 FRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKA 230
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
IH + + G+ + V NSL +MY + G D L ++ E ++VS+ +LI + Q
Sbjct: 231 IHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQ 290
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
K E F M + P+ +FA C+ + L G LHC + L + V N+
Sbjct: 291 EVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNS 350
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+M +YS + A F+ + +D+ISW+T I E+G F M G +P
Sbjct: 351 MMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWM-RQSGTKP 409
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
DF AS+L+ +A ++ G+Q+HA + L Q+ V ++L+NMY+KCG I + +F
Sbjct: 410 TDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIF 469
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
E ++VS +I +A H A+ LFE+ G +PDSVTFI +LTAC H+G +
Sbjct: 470 GETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLD 529
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
G YFN M++TY + P EH+ C++DLL RAG+L +AE+ + +D +V TLL A
Sbjct: 530 LGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIA 589
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
C+ + D+ G R A+++ L PT + V L+N+Y+S G + A RK +K G+ KEP
Sbjct: 590 CKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEP 649
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLK 573
+S I+++ F + H + +I +L+
Sbjct: 650 GWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 230/458 (50%), Gaps = 17/458 (3%)
Query: 17 ALQQGISLHAAVLKMGIQPDVI-VSNHV---------LNLYAKCGKMILARKVFDEMSER 66
+Q+ + ++L+ ++ +++ +SN V L G + AR+VFD+M
Sbjct: 10 TIQRFCTTSISLLQKPVEENIVRISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHG 69
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLL-----PNEYIFASAISACAGIQSLVKGQQ 121
++VSW+++I + A AL FS M ++ P+ + + + AC ++ G+
Sbjct: 70 DIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGES 129
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+HAY++K S +VG+SL+ MY +VG + V+ E N V++ A+I G V +
Sbjct: 130 LHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGR 189
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
++G F M R L D ++FA L+ C+ ++ G +H + + V N+
Sbjct: 190 YKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANS 249
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+ +Y++ + + F + E+D++SW + I A K + F +M N V P
Sbjct: 250 LATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQ-VPP 308
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
++ TFAS+ +ACA L+ + G+Q+H +++ + LN + V N+++ MY+ CG + + LF
Sbjct: 309 NEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLF 368
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
M R+++SW+TII + G K F M+ +G KP LL+ + ++
Sbjct: 369 QGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVI- 427
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
EG +++ +G+ + + LI++ + G + EA
Sbjct: 428 EGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 148/293 (50%), Gaps = 13/293 (4%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++ +S+ C+ L G LH VL +G+ + VSN ++ +Y+ CG ++ A +F
Sbjct: 311 QTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQG 370
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
M R+++SWS +I G+ QAG ++FS M P ++ AS +S + + G
Sbjct: 371 MRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGG 430
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+HA +L FG S V +SLI+MY K G +A +++GE ++VS A+I G+ E+
Sbjct: 431 RQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEH 490
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKG-----MILHCLTVKCKLES 234
+ ++ ++F+ L+ G PD +F L C+ S L G M+ ++ E
Sbjct: 491 GKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEH 550
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKG 286
++ L + + +AEK + +KD + W T + AC D E+G
Sbjct: 551 Y----GCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERG 599
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 189/611 (30%), Positives = 337/611 (55%), Gaps = 35/611 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+L + + +G LH +++ + D+I+ + ++++Y+KCG + A +VF +
Sbjct: 379 NLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSL 438
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKG 119
ERN VS++A+++G+ Q G+ ALE + M + P+++ F + ++ CA ++ +G
Sbjct: 439 LERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQG 498
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+QIHA+ ++ V L+ MY + G + A ++ E N S+N++I G+ +N
Sbjct: 499 RQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQN 558
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ ++ +FK M G+ PD FS + L C +D +KG LH V+ +E +
Sbjct: 559 GETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQ 618
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN---- 295
++ +Y+K + A K + +KD+I N ++A + ++F +M
Sbjct: 619 VVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTA 678
Query: 296 ----------DHGVRPDDF----------------TFASILAACAGLASVQHGKQIHAHL 329
+ G++ + F T +I+ C+ L +++HG Q+H+ +
Sbjct: 679 LWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLI 738
Query: 330 IRMR-LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
I+ +N V + ALV+MY+KCG I+ + +F+ M +N+VSWN +I+ ++ H A
Sbjct: 739 IKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEA 798
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID 448
L L+E+M G+ P+ VTF+ +L+AC+H GLV+EG F SM++ Y I EH+TC++D
Sbjct: 799 LILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVD 858
Query: 449 LLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSP 508
LLGRAG+L +A+E+ +K P+ + G LL ACR+ +D+ +G A++LF L P P
Sbjct: 859 LLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGP 918
Query: 509 YVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
YV++SN+YA+ G W +V R+M+K G+KK+P S IE+ + F +H K EI
Sbjct: 919 YVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEI 978
Query: 569 NYMLKTLSLAA 579
L+ L+L +
Sbjct: 979 YNNLRHLTLQS 989
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 144/463 (31%), Positives = 253/463 (54%), Gaps = 9/463 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCG---KMILARKVFDE 62
SSL+ C + + Q+G S+H ++ G PD + +L LYA+ G + ARK+F+E
Sbjct: 75 SSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEE 134
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
M ERNL +W+ MI + + +++ L + +M +++ F S I AC ++ +
Sbjct: 135 MPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGV 194
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+ + +K G FVG +L+ Y + G+ DA+ E ++V++NA+IAG+V+
Sbjct: 195 RQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKI 254
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
E+ + +F ML+ G+ PD F+FA L +C G +H + C + + FVG
Sbjct: 255 LSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVG 314
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N ++ +Y+K + K F + E++ ++WN+ I+A + + L +F M + G
Sbjct: 315 NALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQ-ESGY 373
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+ + F SIL A AGLA + G+++H HL+R LN D+ +G+ALV+MY+KCG++ +++
Sbjct: 374 KSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQ 433
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA-TGIKPDSVTFIGLLTACNHAG 418
+F +L RN VS+N ++A + AL+L+ M++ GI+PD TF LLT C +
Sbjct: 434 VFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQR 493
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+G + + I+ +I T L+ + G+L A+E
Sbjct: 494 NDNQGRQIHAHLIRA-NITKNIIVETELVHMYSECGRLNYAKE 535
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 227/414 (54%), Gaps = 3/414 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S++ C + + L ++V+K G+ ++ V +++ YA+ G M A DE+
Sbjct: 177 TFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEI 236
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
++V+W+A+I+G+ + A F +M + P+ + FASA+ C ++S G+
Sbjct: 237 EGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGK 296
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H+ + G+ +FVGN+LI MY K L V+ E E N V++N++I+ +
Sbjct: 297 QVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFG 356
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+F M G +RF+ L + D+ KG LH V+ L S+ +G+
Sbjct: 357 HFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGS 416
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +YSK ++ EA + FR + E++ +S+N +A E+ L ++ +M ++ G++
Sbjct: 417 ALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQ 476
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD FTF ++L CA + G+QIHAHLIR + +++ V LV+MY++CG ++ + ++
Sbjct: 477 PDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEI 536
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
FN M RN SWN++I + + AL+LF+QM+ GIKPD + +L++C
Sbjct: 537 FNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSC 590
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/492 (26%), Positives = 251/492 (51%), Gaps = 36/492 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S L C ++ G +H+ ++ G + D V N ++++YAKC KVFDEM
Sbjct: 278 TFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEM 337
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
ERN V+W+++IS Q G AL F +M N + S + A AG+ + KG+
Sbjct: 338 GERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGR 397
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H + ++ S +G++L+ MY K G +A V+ E N VS+NAL+AG+V+
Sbjct: 398 ELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEG 457
Query: 181 QPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ E+ E++ M + G+ PD+F+F L +C+ + +G +H ++ + N V
Sbjct: 458 KAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVE 517
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ +YS+ + A++ F + E++ SWN+ I + ++ L +FK+M + G+
Sbjct: 518 TELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLN-GI 576
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+PD F+ +S+L++C L+ Q G+++H ++R + ++ + LV+MYAKCG + ++K
Sbjct: 577 KPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWK 636
Query: 360 -------------------------------LFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
LF++M RN WN+I+A +AN L +
Sbjct: 637 VYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKES 696
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID 448
F +M + I+ D +T + ++ C+ ++ G+ + + K ++ + T L+D
Sbjct: 697 FNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVD 756
Query: 449 LLGRAGKLLEAE 460
+ + G + +A
Sbjct: 757 MYSKCGAITKAR 768
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 177/377 (46%), Gaps = 9/377 (2%)
Query: 92 SQMHLLP----NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMK 147
+ +H P N ++S I C S +G+ IH + GY +++ ++ +Y +
Sbjct: 59 TSIHTKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYAR 118
Query: 148 VGYSSD---ALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSF 204
G D A ++ E E NL ++N +I + + ++ M G D+F+F
Sbjct: 119 SGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTF 178
Query: 205 AGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE 264
++ C D+ L VK L N FVG ++ Y++F + +A + IE
Sbjct: 179 PSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEG 238
Query: 265 KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ 324
+++WN IA +E+ +F M GV PD+FTFAS L C L S GKQ
Sbjct: 239 TSVVTWNAVIAGYVKILSWEEAWGIFDRMLK-IGVCPDNFTFASALRVCGALRSRDGGKQ 297
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
+H+ LI D VGNAL++MYAKC K+F+EM RN V+WN+II+A A
Sbjct: 298 VHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGH 357
Query: 385 GGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFT 444
AL LF +M+ +G K + +L A + +G + + ++ DI +
Sbjct: 358 FNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNL-LNSDIILGS 416
Query: 445 CLIDLLGRAGKLLEAEE 461
L+D+ + G + EA +
Sbjct: 417 ALVDMYSKCGMVEEAHQ 433
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 7/136 (5%)
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
D K S+ + ++D V P ++S++ C S Q GK IH +I N D +
Sbjct: 54 DSPKPTSIHTKPASD--VNP--LPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLM 109
Query: 342 NALVNMYAKCGLIS--C-SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
++ +YA+ G + C + KLF EM RN+ +WNT+I A+A L+L+ +M+ +
Sbjct: 110 TKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGS 169
Query: 399 GIKPDSVTFIGLLTAC 414
G D TF ++ AC
Sbjct: 170 GNFSDKFTFPSVIKAC 185
>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 1000
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 193/571 (33%), Positives = 313/571 (54%), Gaps = 5/571 (0%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++ SL+ C+ + G +H+ L+ + V V N ++N+Y+ GK+ A +F
Sbjct: 246 ATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFW 305
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
MS R+L+SW+ MIS + Q AL+ Q+ + PN F+SA+ AC+ +L+
Sbjct: 306 NMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALID 365
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ +HA L+ VGNSLI+MY K DA V+ ++VS+N LI G+
Sbjct: 366 GKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAV 425
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRK-GMILHCLTVKCKLESNPF 237
+ K +VF M G+ P+ + + SNDL G LH ++ S+ +
Sbjct: 426 LEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEY 485
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N+++ +Y+K + + F I K+++SWN IAA E+ L +F +M +
Sbjct: 486 VANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQH-A 544
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G + D A L++CA LAS++ G Q+H ++ L+ D V NA ++MY KCG +
Sbjct: 545 GNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEM 604
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++ + R WNT+I+ +A + A + F+QM ATG KPD VTF+ LL+AC+HA
Sbjct: 605 LQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHA 664
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV +G Y+NSM ++G+SP I+H C++DLLGR G+ EAE++ ++ P+ + ++ +
Sbjct: 665 GLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRS 724
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LLS+ R +++ IG + AK+L L P S YVLLSNLYA++ W DV R +K +
Sbjct: 725 LLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTINI 784
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
K P+ S ++++ F + + H +I
Sbjct: 785 NKRPACSWLKLKNEVSTFGIGDRGHKHAEKI 815
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 135/461 (29%), Positives = 231/461 (50%), Gaps = 6/461 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + ++++ C + G+ + + V+ G+Q V V+N ++ ++ G++ A K+FD
Sbjct: 145 ANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFD 204
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
M E + +SW+AMIS + G FS M L P+ S +S CA
Sbjct: 205 RMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSH 264
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G IH+ L+ S V N+L++MY G SDA ++ +L+S+N +I+ +V+
Sbjct: 265 GSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQ 324
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N + + P+ +F+ L CS L G ++H + ++ L+ N V
Sbjct: 325 NCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLV 384
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
GN+++ +Y K N + +AEK F+ + D++S+N I + D K + VF M + G
Sbjct: 385 GNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRS-AG 443
Query: 299 VRPDDFTFASILAACAGLASV-QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
++P+ T +I + A + +G+ +HA++IR D V N+L+ MYAKCG + S
Sbjct: 444 IKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESS 503
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+FN + ++N+VSWN IIAA+ G ALKLF M+ G K D V L++C
Sbjct: 504 TNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASL 563
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLE 458
++EG + + G+ D +D+ G+ GK+ E
Sbjct: 564 ASLEEG-MQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDE 603
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 222/413 (53%), Gaps = 7/413 (1%)
Query: 4 SISSLLHHCSK---TKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
+++SL+ C + + + G ++HA + G+ +V + +L+LY G + A+++F
Sbjct: 43 ALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLF 102
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL--LP-NEYIFASAISACAGIQSLV 117
EM ERN+VSW+A++ G AL + QM +P N FA+ +S C +++ V
Sbjct: 103 WEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEV 162
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G Q+ + + G + V NSLI+M+ +G DA ++ E + +S+NA+I+ +
Sbjct: 163 PGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYS 222
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
K F VF M GL PD + + +C+ S+ G +H L ++ L+S+
Sbjct: 223 HQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVT 282
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N ++ +YS + +AE F + +DLISWNT I++ + L ++ + +
Sbjct: 283 VINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTN 342
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
P+ TF+S L AC+ ++ GK +HA ++++ L +++ VGN+L+ MY KC + +
Sbjct: 343 E-SPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDA 401
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGL 410
K+F M ++VS+N +I +A G A+++F M++ GIKP+ +T I +
Sbjct: 402 EKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINI 454
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 157/339 (46%), Gaps = 9/339 (2%)
Query: 173 IAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSV---SNDLRKGMILHCLTVK 229
++G V + FE+ + M +G+ F+ A + C + G +H LT +
Sbjct: 13 VSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHR 72
Query: 230 CKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSV 289
L N ++G ++ LY ++ +A++ F + E++++SW + A S E+ L
Sbjct: 73 AGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRA 132
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
+++M D GV + FA++++ C L + G Q+ + +I L V V N+L+ M+
Sbjct: 133 YRQMRRD-GVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFG 191
Query: 350 KCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
G + + KLF+ M + +SWN +I+ +++ + +F M+ G++PD+ T
Sbjct: 192 NLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCS 251
Query: 410 LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLG 469
L++ C + G +S+ + + L+++ AGKL +AE
Sbjct: 252 LMSVCASSDHFSHGSG-IHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSR- 309
Query: 470 QDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSP 508
+D I T++S+ + + QLFH T SP
Sbjct: 310 RDLISWNTMISSYVQNCNSTDALKTLGQLFH---TNESP 345
>gi|356506341|ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial-like [Glycine max]
Length = 895
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 193/552 (34%), Positives = 308/552 (55%), Gaps = 14/552 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S L C G LH+ V+K G+ +V + N ++ +Y++ G + AR+VFDEM
Sbjct: 177 TYTSALAFCWGDHGFLFGWQLHSLVVKCGLGCEVFIGNALVTMYSRWGMLDEARRVFDEM 236
Query: 64 SERNLVSWSAMISGHHQAGE--HLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
ER+LVSW+AMISG+ Q G+ L A+ F M +L + A+SAC +++L
Sbjct: 237 PERDLVSWNAMISGYAQEGKCYGLEAVLLFVNMVRHGMLIDHVSLTGAVSACGHMKNLEL 296
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+QIH + K GY + V N L+S Y K DA V+ N+VS+ +I+
Sbjct: 297 GRQIHGLTQKVGYGTHVSVCNVLMSTYSKCEVPKDAKAVFESISNRNVVSWTTMIS---- 352
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
E +F M G+ P+ +F G + ++ N + +G+ +H L +K S V
Sbjct: 353 -IDEEDAVSLFNAMRVNGVYPNDVTFIGLIHAVTIRNLVTEGLTIHGLCIKSCFLSEQTV 411
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N+ + +Y+KF I E+ K F + ++ +SWN I+ + Y++ L + +S
Sbjct: 412 SNSFITMYAKFECIQESTKIFEELNCRETVSWNALISGYAQNGSYKEALLTY--LSAVKE 469
Query: 299 VRPDDFTFASILAACAGLA--SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
++P+ +TF S+L A A S+ HGK H+HL+++ L D V AL++MY K G I
Sbjct: 470 IKPNQYTFGSVLNAIAAAEDISLNHGKSCHSHLLKLGLGTDPIVSGALLDMYGKRGDIIE 529
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
S ++FNE L R +W II+A+A H S + L+ +M+ GI PDS+TF+ +L AC
Sbjct: 530 SQRVFNETLERTQFAWTAIISAYARHGDFESVMSLYTEMEREGINPDSITFLSVLAACCR 589
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
G+V G F+SM K + I P EH++ ++D+LGR G+L EAEE + P G VL
Sbjct: 590 KGMVDAGHRVFDSMVKKHSIEPTSEHYSIMVDMLGRVGRLDEAEELMHQIPGGPGLSVLQ 649
Query: 477 TLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSG 536
+LL +CRL ++ + E++ +L + P ++ PYVL++NLYA G W VA R+ ++ G
Sbjct: 650 SLLGSCRLHGNMEMAEKVVGRLIEMDPASSGPYVLMANLYAEKGKWEKVAEVRRGMRGRG 709
Query: 537 LKKEPSYSMIEV 548
+KKE +S ++V
Sbjct: 710 VKKEVGFSWVDV 721
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 151/527 (28%), Positives = 241/527 (45%), Gaps = 53/527 (10%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G +H + G V VSN ++ +Y K G A VF+ +S ++VSW+ ++SG +
Sbjct: 96 GCQIHGFAVCSGFVSFVTVSNSLMKMYCKSGNFGKALIVFENLSHPDIVSWNTVLSGFEE 155
Query: 81 AGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
+ + AL F MH + + + SA++ C G + G Q+H+ +K G F+
Sbjct: 156 SVD---ALNFARSMHYCGIAFDPVTYTSALAFCWGDHGFLFGWQLHSLVVKCGLGCEVFI 212
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE---VFKLMLR 194
GN+L++MY + G +A V+ E E +LVS+NA+I+G+ + + G E +F M+R
Sbjct: 213 GNALVTMYSRWGMLDEARRVFDEMPERDLVSWNAMISGYAQEGKC-YGLEAVLLFVNMVR 271
Query: 195 QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGE 254
G+L D S G + C +L G +H LT K ++ V N +M+ YSK + +
Sbjct: 272 HGMLIDHVSLTGAVSACGHMKNLELGRQIHGLTQKVGYGTHVSVCNVLMSTYSKCEVPKD 331
Query: 255 AEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA 314
A+ F I ++++SW T I+ D E +S+F M + GV P+D TF ++ A
Sbjct: 332 AKAVFESISNRNVVSWTTMIS-----IDEEDAVSLFNAMRVN-GVYPNDVTFIGLIHAVT 385
Query: 315 GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNT 374
V G IH I+ + V N+ + MYAK I S K+F E+ R VSWN
Sbjct: 386 IRNLVTEGLTIHGLCIKSCFLSEQTVSNSFITMYAKFECIQESTKIFEELNCRETVSWNA 445
Query: 375 IIAAHANHRLGGSALKLFEQMKATG-IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT 433
+I+ +A + G L + A IKP+ TF +L A A +
Sbjct: 446 LISGYAQN--GSYKEALLTYLSAVKEIKPNQYTFGSVLNAIAAA----------EDISLN 493
Query: 434 YGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGER 493
+G S C LL K LG DPIV G LL R D++ +R
Sbjct: 494 HGKS-------CHSHLL--------------KLGLGTDPIVSGALLDMYGKRGDIIESQR 532
Query: 494 LAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
+ + T + + + YA G + V ++ G+ +
Sbjct: 533 VFNETLE---RTQFAWTAIISAYARHGDFESVMSLYTEMEREGINPD 576
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 175/344 (50%), Gaps = 17/344 (4%)
Query: 85 LLALEFFSQMHLLPN--EYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLI 142
L A + Q+H L N E A ++ AC G L G QIH +++ G+ S V NSL+
Sbjct: 62 LTAFKNHFQLHSLENVDEVTVALSLKACQGESKL--GCQIHGFAVCSGFVSFVTVSNSLM 119
Query: 143 SMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRF 202
MY K G AL+V+ P++VS+N +++GF E+ + M G+ D
Sbjct: 120 KMYCKSGNFGKALIVFENLSHPDIVSWNTVLSGFEESVD---ALNFARSMHYCGIAFDPV 176
Query: 203 SFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLI 262
++ L C + G LH L VKC L F+GN ++ +YS++ ++ EA + F +
Sbjct: 177 TYTSALAFCWGDHGFLFGWQLHSLVVKCGLGCEVFIGNALVTMYSRWGMLDEARRVFDEM 236
Query: 263 EEKDLISWNTFIAACSH---CADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
E+DL+SWN I+ + C E L +F M HG+ D + ++AC + ++
Sbjct: 237 PERDLVSWNAMISGYAQEGKCYGLEAVL-LFVNMVR-HGMLIDHVSLTGAVSACGHMKNL 294
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
+ G+QIH ++ V V N L++ Y+KC + + +F + +RNVVSW T+I+
Sbjct: 295 ELGRQIHGLTQKVGYGTHVSVCNVLMSTYSKCEVPKDAKAVFESISNRNVVSWTTMISID 354
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
A+ LF M+ G+ P+ VTFIGL+ A LV EG
Sbjct: 355 EE-----DAVSLFNAMRVNGVYPNDVTFIGLIHAVTIRNLVTEG 393
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 125/259 (48%), Gaps = 14/259 (5%)
Query: 164 PNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP--DRFSFAGGLEICSVSNDLRKGM 221
PN S N + + ++ P + FK + L D + A L+ C + L G
Sbjct: 40 PNAASVNHSMLNCLHSRLPFQALTAFKNHFQLHSLENVDEVTVALSLKACQGESKL--GC 97
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
+H V S V N++M +Y K G+A F + D++SWNT ++
Sbjct: 98 QIHGFAVCSGFVSFVTVSNSLMKMYCKSGNFGKALIVFENLSHPDIVSWNTVLSG----- 152
Query: 282 DYEKGLSVFKEMSNDH--GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG 339
+E+ + + H G+ D T+ S LA C G G Q+H+ +++ L +V
Sbjct: 153 -FEESVDALNFARSMHYCGIAFDPVTYTSALAFCWGDHGFLFGWQLHSLVVKCGLGCEVF 211
Query: 340 VGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR--LGGSALKLFEQMKA 397
+GNALV MY++ G++ + ++F+EM R++VSWN +I+ +A G A+ LF M
Sbjct: 212 IGNALVTMYSRWGMLDEARRVFDEMPERDLVSWNAMISGYAQEGKCYGLEAVLLFVNMVR 271
Query: 398 TGIKPDSVTFIGLLTACNH 416
G+ D V+ G ++AC H
Sbjct: 272 HGMLIDHVSLTGAVSACGH 290
>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 1131
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 208/573 (36%), Positives = 319/573 (55%), Gaps = 12/573 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+ C+ L G LH ++K ++ V+N ++++YAK G + ARK F+ M
Sbjct: 412 TFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFM 471
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ VSW+A+I G+ Q + A F +M +LP+E AS +SACA ++ +GQ
Sbjct: 472 KIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQ 531
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q H +K G + + G+SLI MY+K G A V+ N+VS NALIAG+ +
Sbjct: 532 QCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMSH 591
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK-LESNPFVG 239
E+ +F+ + GL P +FAG L+ C + L G +H +K L S+ V
Sbjct: 592 L-EEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVC 650
Query: 240 NTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
+++ +Y ++E F ++ K L+ W I+ + +EK L ++ M +D+
Sbjct: 651 VSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDN- 709
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ PD TFAS+L ACAG++S+Q G+++H+ + N D ++L++MYAKCG + S
Sbjct: 710 ILPDQATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDVKGSL 769
Query: 359 KLFNEMLHRN-VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++F+EM RN V+SWN++I A + AL++F+QM+ I PD VTF+G+L+AC+HA
Sbjct: 770 QVFHEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHA 829
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
G V EG F+ M Y + P ++H C++D+LGR G L EAEE+ K DP++ T
Sbjct: 830 GRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWST 889
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL ACR D V G+R A +L L+P ++S YVLLS LYA W R+ +K G+
Sbjct: 890 LLGACRKHGDEVRGKRAANKLMELKPQSSSSYVLLSGLYAESENWSGADSLRREMKLKGV 949
Query: 538 KKEPSYSMIE----VQGTFEKFTVAEFSHSKIG 566
KK P YS IE VQG + A S IG
Sbjct: 950 KKLPGYSWIEPGRDVQGRGAVRSTAGPGCSSIG 982
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 133/398 (33%), Positives = 216/398 (54%), Gaps = 5/398 (1%)
Query: 30 KMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALE 89
++G PD I V+N Y G++ ARK+F ++ N+V+W+ MISGH + G A+
Sbjct: 236 RVGHVPDQIALVTVINAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAIS 295
Query: 90 FFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYM 146
FF ++ L S +SA A + L G +HA ++K G +VG++L++MY
Sbjct: 296 FFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYA 355
Query: 147 KVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAG 206
K A V+ E N+V +NA++ GF +N ++ E F M R G PD F+F
Sbjct: 356 KCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTS 415
Query: 207 GLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKD 266
C+ + L G LH + +K K SN FV N ++ +Y+K + EA K F ++ D
Sbjct: 416 IFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHD 475
Query: 267 LISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
+SWN I ++ +F+ M ++ GV PD+ + ASI++ACA + + G+Q H
Sbjct: 476 NVSWNAIIVGYVQEEYNDEAFFMFRRMVSN-GVLPDEVSLASIVSACANVKEFKQGQQCH 534
Query: 327 AHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGG 386
L+++ L+ G++L++MY KCG++ + +F M +RNVVS N +IA + L
Sbjct: 535 CLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMSHL-E 593
Query: 387 SALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
A+ LF++++ G+KP VTF GLL C+ A ++ G
Sbjct: 594 EAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGR 631
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 141/481 (29%), Positives = 252/481 (52%), Gaps = 8/481 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+ S+L + L G +HA +K G+ +V V + ++N+YAKC KM A++VF+ +
Sbjct: 311 SLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSL 370
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
ERN+V W+AM+ G Q G +EFFS M P+E+ F S SACA + L G
Sbjct: 371 GERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGG 430
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H +K + S FV N+L+ MY K G +A + + VS+NA+I G+V+ +
Sbjct: 431 QLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEE 490
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
++ F +F+ M+ G+LPD S A + C+ + ++G HCL VK L+++ G+
Sbjct: 491 YNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGS 550
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +Y K ++ A F + ++++S N IA + + E+ + +F+E+ G++
Sbjct: 551 SLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYT-MSHLEEAIHLFQEIQM-VGLK 608
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCSYK 359
P + TFA +L C G + G+QIH +++ L+ V +L+ MY + S
Sbjct: 609 PTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSET 668
Query: 360 LFNEMLH-RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
LF+E+ + + +V W +I+ +A AL+ ++ M++ I PD TF +L AC
Sbjct: 669 LFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMS 728
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
++ G+ + + T G + D + LID+ + G + + + + P I ++
Sbjct: 729 SLQTGQEVHSLIFHT-GFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSM 787
Query: 479 L 479
+
Sbjct: 788 I 788
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/470 (28%), Positives = 226/470 (48%), Gaps = 54/470 (11%)
Query: 9 LHHC----------SKTKALQQGIS----LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMI 54
L HC K KA+ Q +S +H+ LK+G+ ++ N +++LY KCG +
Sbjct: 34 LQHCRRIQAHNLFNEKPKAVLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVD 93
Query: 55 LARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
A+K F + ++++ +W++++S + G ++ F M + PNE+ FA +SAC+
Sbjct: 94 FAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACS 153
Query: 112 GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNA 171
G+Q + G+Q+H K G+ SF LI MY K DA LV+ A + VS+
Sbjct: 154 GLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTT 213
Query: 172 LIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK 231
LIAG+V + P + +VF M R G +PD+ +
Sbjct: 214 LIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALV-------------------------- 247
Query: 232 LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK 291
T++ Y + +A K F I ++++WN I+ + E+ +S F
Sbjct: 248 ---------TVINAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFL 298
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
E+ G++ + S+L+A A L+ + +G +HA I+ L+ +V VG+ALVNMYAKC
Sbjct: 299 ELKKT-GLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKC 357
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
+ + ++FN + RN+V WN ++ A + L ++ F MK G +PD TF +
Sbjct: 358 SKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIF 417
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+AC + G M K + ++ L+D+ ++G L EA +
Sbjct: 418 SACASLHYLDFGGQLHTVMIKN-KFTSNLFVANALVDMYAKSGALKEARK 466
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 219/464 (47%), Gaps = 34/464 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + +L CS + + G +H V KMG ++++YAKC + AR VFD
Sbjct: 144 TFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGA 203
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
+ VSW+ +I+G+ + G + A++ F +M
Sbjct: 204 LNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQ---------------------------- 235
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ G+ ++I+ Y+ +G +DA ++ + PN+V++N +I+G + E
Sbjct: 236 ----RVGHVPDQIALVTVINAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAE 291
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ F + + GL R S L + + L G ++H +K L+ N +VG+ ++
Sbjct: 292 EAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALV 351
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K + + A++ F + E++++ WN + + ++ + F M HG +PD+
Sbjct: 352 NMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKR-HGPQPDE 410
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
FTF SI +ACA L + G Q+H +I+ + ++ V NALV+MYAK G + + K F
Sbjct: 411 FTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEF 470
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M + VSWN II + A +F +M + G+ PD V+ +++AC + K+G
Sbjct: 471 MKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQG 530
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+ + K G+ + LID+ + G +L A + P
Sbjct: 531 QQCHCLLVKV-GLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMP 573
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 136/268 (50%), Gaps = 9/268 (3%)
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
L ++H ++K + +GN I+ LY K + A+KAF +E+KD+ +WN+ ++
Sbjct: 57 LSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSM 116
Query: 277 CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
+ + F M N HGVRP++FTFA +L+AC+GL + +GKQ+H + +M
Sbjct: 117 YLDHGLFATVVQSFVCMWN-HGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGF 175
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
L++MYAKC + + +F+ L+ + VSW T+IA + A+K+F++M+
Sbjct: 176 RSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQ 235
Query: 397 ATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
G PD + + ++ A G + + F + +P++ + +I + G
Sbjct: 236 RVGHVPDQIALVTVINAYVALGRLADARKLFTQIP-----NPNVVAWNVMISGHAKRGFA 290
Query: 457 LEAEEY---TKKFPLGQDPIVLGTLLSA 481
EA + KK L LG++LSA
Sbjct: 291 EEAISFFLELKKTGLKATRSSLGSVLSA 318
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 153/365 (41%), Gaps = 39/365 (10%)
Query: 111 AGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFN 170
A +Q+L + IH+ SLK G +GN ++ +Y+K G A + + ++ ++N
Sbjct: 52 AVLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWN 111
Query: 171 ALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC 230
++++ ++++ + F M G+ P+ F+FA L CS D+ G +HC K
Sbjct: 112 SVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKM 171
Query: 231 KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVF 290
F ++ +Y+K + +A F D +SW T IA + + VF
Sbjct: 172 GFGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVF 231
Query: 291 KEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
+M G PD ++ +N Y
Sbjct: 232 DKMQR-VGHVPDQIALVTV-----------------------------------INAYVA 255
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGL 410
G ++ + KLF ++ + NVV+WN +I+ HA A+ F ++K TG+K + +
Sbjct: 256 LGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSV 315
Query: 411 LTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQ 470
L+A ++ G K G+ ++ + L+++ + K+ A++ LG+
Sbjct: 316 LSAIASLSMLNYGSMVHAQAIKE-GLDDNVYVGSALVNMYAKCSKMDAAKQVFNS--LGE 372
Query: 471 DPIVL 475
IVL
Sbjct: 373 RNIVL 377
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 199/589 (33%), Positives = 319/589 (54%), Gaps = 27/589 (4%)
Query: 14 KTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSA 73
K L G +H + G +N ++ +YAK G++ A+ + +R+LV+W++
Sbjct: 128 KRDGLWLGKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNS 186
Query: 74 MISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFG 130
MIS Q + AL F M L P+ FAS + AC+ + L G++IHAY+L+
Sbjct: 187 MISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTD 246
Query: 131 -YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVF 189
SFVG++L+ MY G LV+ + + +NA+IAG+ +++ EK +F
Sbjct: 247 DVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLF 306
Query: 190 -KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
++ GL + + + + + + +H +K LE+N ++ N ++ +YS+
Sbjct: 307 IEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSR 366
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS------------ND 296
I +++ F +E++D++SWNT I + C L + EM ND
Sbjct: 367 MGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYND 426
Query: 297 HG---VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
+P+ T ++L CA L+++ GK+IHA+ IR L V VG+ALV+MYAKCG
Sbjct: 427 EKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGC 486
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG-----IKPDSVTFI 408
++ + ++F++M RNV++WN II A+ H G +L+LFE M A G +KP VTFI
Sbjct: 487 LNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFI 546
Query: 409 GLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
L +C+H+G+V EG + F+ M+ +GI P +H+ C++DL+GRAGK+ EA P
Sbjct: 547 ALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPS 606
Query: 469 GQDPI-VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAG 527
G D + +LL ACR+ ++ IGE A+ L LQP S YVLLSN+Y+S G+W
Sbjct: 607 GFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMN 666
Query: 528 ARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
R+ +K G+KKEP S IE KF + SH + +++ L+TLS
Sbjct: 667 LRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLS 715
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 245/493 (49%), Gaps = 33/493 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQP--DVIVSNHVLNLYAKCGKMILARKVFD 61
+ ++L + + L G +HA V K G V + N ++N+Y KCG + A KVFD
Sbjct: 12 AFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFD 71
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQS--- 115
++ER+ VSW+++IS + E +A++ F M + P+ + S AC+ ++
Sbjct: 72 RITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDG 131
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDA--LLVYGEAFEPNLVSFNALI 173
L G+QIH + G+ +F N+L++MY K+G DA LLV E + +LV++N++I
Sbjct: 132 LWLGKQIHGCCFRKGHWR-TFSNNALMAMYAKLGRLDDAKSLLVLFE--DRDLVTWNSMI 188
Query: 174 AGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC-KL 232
+ F +N++ + +LM+ +G+ PD +FA L CS + LR G +H ++ +
Sbjct: 189 SSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDV 248
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
N FVG+ ++ +Y + F + ++ + WN IA + EK L +F E
Sbjct: 249 IENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIE 308
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
M G+ + T +SI+ A + + IH ++I+ L + + NAL++MY++ G
Sbjct: 309 MEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMG 368
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM----------------K 396
I S ++F+ M R++VSWNTII ++ AL L +M K
Sbjct: 369 DIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEK 428
Query: 397 ATGIKPDSVTFIGLLTAC-NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGK 455
KP+S+T + +L C + + L K E + ++ ++ + + L+D+ + G
Sbjct: 429 QVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNL--LASQVTVGSALVDMYAKCGC 486
Query: 456 LLEAEEYTKKFPL 468
L A + P+
Sbjct: 487 LNLARRVFDQMPI 499
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/369 (32%), Positives = 193/369 (52%), Gaps = 16/369 (4%)
Query: 98 PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV--GNSLISMYMKVGYSSDAL 155
P+ + F + + A AGIQ L G+QIHA+ KFGY S S V N+L++MY K G DA
Sbjct: 8 PDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAY 67
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN 215
V+ E + VS+N++I+ ++ E + F+LML +G P F+ CS
Sbjct: 68 KVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACS--- 124
Query: 216 DLRK------GMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
+LRK G +H + K F N +MA+Y+K + +A+ L E++DL++
Sbjct: 125 NLRKRDGLWLGKQIHGCCFR-KGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVT 183
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
WN+ I++ S + + L + M + GV+PD TFAS+L AC+ L ++ GK+IHA+
Sbjct: 184 WNSMISSFSQNERFMEALMFLRLMVLE-GVKPDGVTFASVLPACSHLDLLRTGKEIHAYA 242
Query: 330 IRM-RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
+R + ++ VG+ALV+MY CG + +F+ +L R + WN +IA +A A
Sbjct: 243 LRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKA 302
Query: 389 LKLFEQMK-ATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLI 447
L LF +M+ A G+ ++ T ++ A + E + K G+ + LI
Sbjct: 303 LMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKR-GLETNRYLQNALI 361
Query: 448 DLLGRAGKL 456
D+ R G +
Sbjct: 362 DMYSRMGDI 370
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 120/238 (50%), Gaps = 7/238 (2%)
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE--SNPFVGNTIMALYSKF 249
M+ G PD F+F L+ + +L G +H K S+ + NT++ +Y K
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 250 NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
+G+A K F I E+D +SWN+ I+A ++E + F+ M + G P FT S+
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLME-GFEPSSFTLVSM 119
Query: 310 LAACAGLAS---VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
AC+ L + GKQIH R + + NAL+ MYAK G + + L
Sbjct: 120 ALACSNLRKRDGLWLGKQIHGCCFR-KGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFED 178
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
R++V+WN++I++ + + AL M G+KPD VTF +L AC+H L++ G+
Sbjct: 179 RDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGK 236
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 152/306 (49%), Gaps = 33/306 (10%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++SS++ + + + + +H V+K G++ + + N ++++Y++ G + ++++FD
Sbjct: 319 ATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFD 378
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL-------------------PNEYI 102
M +R++VSW+ +I+ + G AL +M + PN
Sbjct: 379 SMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSIT 438
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+ + CA + +L KG++IHAY+++ AS VG++L+ MY K G + A V+ +
Sbjct: 439 LMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMP 498
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG-----LLPDRFSFAGGLEICSVSNDL 217
N++++N +I + + + ++ E+F+ M+ +G + P +F CS S +
Sbjct: 499 IRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMV 558
Query: 218 RKGM-ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE-----KDLISWN 271
+G+ + H + + +E P I+ L + G+ E+A+ L+ + +W+
Sbjct: 559 DEGLSLFHKMKNEHGIEPAPDHYACIVDLVGR---AGKVEEAYGLVNTMPSGFDKVGAWS 615
Query: 272 TFIAAC 277
+ + AC
Sbjct: 616 SLLGAC 621
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 191/588 (32%), Positives = 318/588 (54%), Gaps = 45/588 (7%)
Query: 32 GIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS-----ERNLVSWSAMISGHHQAGEHLL 86
G++PD + N +++ YA+ G+ A K F EM + N+VSW+A+I+G Q G
Sbjct: 286 GVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFE 345
Query: 87 ALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFG-YASISFVGNSLI 142
AL F +M L PN ASA+SAC + L G++IH Y +K S VGNSL+
Sbjct: 346 ALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLV 405
Query: 143 SMYMK--------------------------VGYS-----SDALLVYGE----AFEPNLV 167
Y K GY+ +A+ + E EP+++
Sbjct: 406 DYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDII 465
Query: 168 SFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLT 227
++N L+ GF + + E F+ M G+ P+ + +G L C +L+ G +H
Sbjct: 466 TWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYV 525
Query: 228 VKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGL 287
++ +E + VG+ ++++YS + + A F + +D++ WN+ I+AC+ L
Sbjct: 526 LRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNAL 585
Query: 288 SVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNM 347
+ +EM N V + T S L AC+ LA+++ GK+IH +IR L+ + N+L++M
Sbjct: 586 DLLREM-NLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDM 644
Query: 348 YAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTF 407
Y +CG I S ++F+ M R++VSWN +I+ + H G A+ LF+Q + G+KP+ +TF
Sbjct: 645 YGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITF 704
Query: 408 IGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
LL+AC+H+GL++EG YF M+ Y + P +E + C++DLL RAG+ E E+ +K P
Sbjct: 705 TNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMP 764
Query: 468 LGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAG 527
+ V G+LL ACR+ + + E A+ LF L+P ++ YVL++N+Y++ G W D A
Sbjct: 765 FEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAK 824
Query: 528 ARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
R ++K+ G+ K P S IEV+ F V + SH + +I+ +++L
Sbjct: 825 IRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESL 872
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 241/497 (48%), Gaps = 75/497 (15%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
CS+ K + G ++ +L +G + + V +L+++ KCG+M +AR+ F+E+ +++ W
Sbjct: 200 CSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMW 259
Query: 72 SAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGY 131
+ M+SG+ GE AL+ S M L S VK Q+
Sbjct: 260 NIMVSGYTSKGEFKKALKCISDMKL------------------SGVKPDQV--------- 292
Query: 132 ASISFVGNSLISMYMKVGYSSDALLVYGEA-----FEPNLVSFNALIAGFVENQQPEKGF 186
N++IS Y + G +A + E F+PN+VS+ ALIAG +N +
Sbjct: 293 -----TWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEAL 347
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILH--CLTVKCKLESNPFVGNTIMA 244
VF+ M+ +G+ P+ + A + C+ + LR G +H C+ V+ +L+S+ VGN+++
Sbjct: 348 SVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE-ELDSDLLVGNSLVD 406
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS---------- 294
Y+K + A + F +I++ DL+SWN +A + +E+ + + EM
Sbjct: 407 YYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIIT 466
Query: 295 ------------------------NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
+ G+ P+ T + LAAC + +++ GK+IH +++
Sbjct: 467 WNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVL 526
Query: 331 RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALK 390
R + GVG+AL++MY+ C + + +F+E+ R+VV WN+II+A A +AL
Sbjct: 527 RNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALD 586
Query: 391 LFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLL 450
L +M + ++ ++VT + L AC+ +++G+ + + G+ LID+
Sbjct: 587 LLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRC-GLDTCNFILNSLIDMY 645
Query: 451 GRAGKLLEAEEYTKKFP 467
GR G + ++ P
Sbjct: 646 GRCGSIQKSRRIFDLMP 662
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 211/436 (48%), Gaps = 48/436 (11%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+I+S + C+ L+ G +H +K+ + D++V N +++ YAKC + +AR+ F
Sbjct: 364 TIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGM 423
Query: 63 MSERNLVSWSAMISGHHQAGEH-----LL------------------------------A 87
+ + +LVSW+AM++G+ G H LL A
Sbjct: 424 IKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAA 483
Query: 88 LEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISM 144
LEFF +MH + PN + A++AC +++L G++IH Y L+ + VG++LISM
Sbjct: 484 LEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISM 543
Query: 145 YMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSF 204
Y A V+ E ++V +N++I+ ++ + ++ + M + + +
Sbjct: 544 YSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTM 603
Query: 205 AGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE 264
L CS LR+G +H ++C L++ F+ N+++ +Y + I ++ + F L+ +
Sbjct: 604 VSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQ 663
Query: 265 KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ 324
+DL+SWN I+ +++F++ G++P+ TF ++L+AC+ ++ G +
Sbjct: 664 RDLVSWNVMISVYGMHGFGMDAVNLFQQFRT-MGLKPNHITFTNLLSACSHSGLIEEGWK 722
Query: 325 IHAHLIRMRLNQDVGVGN--ALVNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAA--- 378
+ +++ D V +V++ ++ G + + + +M N W +++ A
Sbjct: 723 -YFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRI 781
Query: 379 HANHRLGGSALK-LFE 393
H N L A + LFE
Sbjct: 782 HCNPDLAEYAARYLFE 797
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 142/282 (50%), Gaps = 4/282 (1%)
Query: 204 FAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIE 263
+A L+ C +LR G +H V ++ F+G+ ++ +Y + + +A + F +
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 264 EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGK 323
E+++ SW + DYE+ + +F M N+ GVRPD F F + AC+ L + + GK
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNE-GVRPDHFVFPKVFKACSELKNYRVGK 210
Query: 324 QIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR 383
++ +++ + + V ++++M+ KCG + + + F E+ ++V WN +++ + +
Sbjct: 211 DVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKG 270
Query: 384 LGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF 443
ALK MK +G+KPD VT+ +++ +G +E YF M P++ +
Sbjct: 271 EFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSW 330
Query: 444 TCLIDLLGRAGKLLEAEEYTKKFPL-GQDP--IVLGTLLSAC 482
T LI + G EA +K L G P I + + +SAC
Sbjct: 331 TALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSAC 372
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 165/382 (43%), Gaps = 44/382 (11%)
Query: 79 HQAGEHLLALEFFSQMHLL-PNE--YIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS 135
H+ G A S M L P+E I+AS + C + +L G Q+HA + G
Sbjct: 65 HRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCE 124
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
F+G+ L+ +Y + G DA ++ + E N+ S+ A++ + E+ ++F LM+ +
Sbjct: 125 FLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNE 184
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
G+ PD F F + CS + R G ++ + E N V +I+ ++ K + A
Sbjct: 185 GVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIA 244
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
+ F IE KD+ WN ++ + +++K L +M GV+PD T+
Sbjct: 245 RRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLS-GVKPDQVTW--------- 294
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM-----LHRNVV 370
NA+++ YA+ G + K F EM NVV
Sbjct: 295 --------------------------NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVV 328
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSM 430
SW +IA + AL +F +M G+KP+S+T ++AC + L++ G
Sbjct: 329 SWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYC 388
Query: 431 EKTYGISPDIEHFTCLIDLLGR 452
K + D+ L+D +
Sbjct: 389 IKVEELDSDLLVGNSLVDYYAK 410
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 191/575 (33%), Positives = 319/575 (55%), Gaps = 4/575 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++ L C+ L G+ LH +K G++P+V V+N ++++YAKC + A ++F M
Sbjct: 250 TLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLM 309
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+LV+W+ MISG Q G AL F M L P+ AS + A + +G+
Sbjct: 310 PRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGK 369
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+IH Y ++ F+ ++L+ +Y K A V+ ++V + +I+G+V N+
Sbjct: 370 EIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNR 429
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E ++F+ +L G+ P+ A L C+ +R G LH +K E +V +
Sbjct: 430 MSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVES 489
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+M +YSK + + F + KD ++WN+ I++ + + E+ L +F++M + GV+
Sbjct: 490 ALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIME-GVK 548
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
++ T +SIL+ACAGL ++ +GK+IH +I+ + D+ +AL++MY KCG + + ++
Sbjct: 549 YNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRV 608
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F M +N VSWN+II+A+ H L ++ L M+ G K D VTF+ L++AC HAG V
Sbjct: 609 FEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQV 668
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+EG F M + Y I P +EH +C++DL RAGKL +A ++ P D + G LL
Sbjct: 669 QEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLH 728
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ R+V + E +++LF L P YVL+SN+ A G W V+ R+++KD ++K
Sbjct: 729 ACRVHRNVELAEIASQELFKLDPHNCGYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQKI 788
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P YS ++V T F A+ +H EI LK+L
Sbjct: 789 PGYSWVDVNNTSHLFVAADKNHPDSEEIYMSLKSL 823
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 227/469 (48%), Gaps = 17/469 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGI-----QPDVIVSNHVLNLYAKCGKMILA 56
A + +LL C L G+ +HA + G+ + ++ +Y + A
Sbjct: 36 AYRLLALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFRDA 95
Query: 57 RKVFDEMSERNL---VSWSAMISGHHQAGEHLLALEFFSQMHL-----LPNEYIFASAIS 108
VF + + W+ +I G AG H LA+ F+ +M P+ + +
Sbjct: 96 VAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVK 155
Query: 109 ACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVS 168
+CA + +L G+ +H + G +VG++LI MY G A V+ E + V
Sbjct: 156 SCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVL 215
Query: 169 FNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV 228
+N ++ G+V+ +F++M G P+ + A L +C+ DL G+ LH L V
Sbjct: 216 WNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAV 275
Query: 229 KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLS 288
K LE V NT++++Y+K + EA + F L+ DL++WN I+ C + L
Sbjct: 276 KYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALR 335
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMY 348
+F +M G++PD T AS+L A L + GK+IH +++R + DV + +ALV++Y
Sbjct: 336 LFCDMQKS-GLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIY 394
Query: 349 AKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
KC + + +F+ +VV +T+I+ + +R+ +A+K+F + A GIKP++V
Sbjct: 395 FKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVA 454
Query: 409 GLLTACNHAGLVKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
L AC ++ G E + ++ Y +E + L+D+ + G+L
Sbjct: 455 STLPACASMAAMRIGQELHGYVLKNAYEGRCYVE--SALMDMYSKCGRL 501
>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
sativa Japonica Group]
gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 188/569 (33%), Positives = 314/569 (55%), Gaps = 13/569 (2%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C+ AL+ G +H+ ++ G D + + ++ +Y++CG + A++VFD M ++V +
Sbjct: 124 CADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGY 183
Query: 72 SAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
+++IS + GE LA E QM L PNE+ + ++AC V GQQIH Y +K
Sbjct: 184 TSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTAC----PRVLGQQIHGYLIK 239
Query: 129 -FGYASIS-FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
G S S + +LI Y + G A V+ N+VS+ +++ ++ + + E+
Sbjct: 240 KIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEAL 299
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
+VF M+ +G+ P+ F+ + L C + G LHC +K L ++ V N ++++Y
Sbjct: 300 QVFGDMISEGVDPNEFALSIVLGAC---GSIGLGRQLHCSAIKHDLITDIRVSNALLSMY 356
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
+ L+ E E IE DL+SW T I+A EK +++ +M ++ G P+ + F
Sbjct: 357 GRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSE-GFTPNGYAF 415
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
+S+L++CA +AS+ G Q H +++ + ++ GNAL+NMY+KCG + + F+ M
Sbjct: 416 SSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHT 475
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
+V SWN++I HA H AL++F +M++ GIKPD TF+G+L CNH+G+V+EGE +
Sbjct: 476 HDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELF 535
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRR 486
F M Y +P H+ C+ID+LGR G+ EA P D ++ TLL++C+L R
Sbjct: 536 FRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHR 595
Query: 487 DVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMI 546
++ IG+ A +L L ++ YVL+SN+YA G W D R+ + ++G+KK+ S I
Sbjct: 596 NLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWI 655
Query: 547 EVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
E+ F + SH I ML L
Sbjct: 656 EINNEVHTFASRDMSHPNSDSIYQMLGEL 684
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 220/427 (51%), Gaps = 14/427 (3%)
Query: 35 PDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM 94
PDV++ LN K G++ A +FD M +N+V+W++++SG+ + G AL F+ M
Sbjct: 46 PDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADM 105
Query: 95 ---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
+ PN++ +A+ ACA + +L G+Q+H+ +++ G+A +++G+ LI MY + G
Sbjct: 106 VESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSL 165
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
A V+ P++V + +LI+ F N + E E ML+QGL P+ + L C
Sbjct: 166 PAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTAC 225
Query: 212 SVSNDLRKGMILHC-LTVKCKLESNPFVGNT-IMALYSKFNLIGEAEKAFRLIEEKDLIS 269
G +H L K L S +T ++ YS+ A+ F + K+++S
Sbjct: 226 PRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVS 281
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
W + + E+ L VF +M ++ GV P++F + +L AC S+ G+Q+H
Sbjct: 282 WCSMMQLYIRDGRLEEALQVFGDMISE-GVDPNEFALSIVLGAC---GSIGLGRQLHCSA 337
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
I+ L D+ V NAL++MY + GL+ + N++ + ++VSW T I+A+ + G A+
Sbjct: 338 IKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAI 397
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
L QM + G P+ F +L++C + +G F+ + G +I LI++
Sbjct: 398 ALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQG-MQFHCLALKLGCDSEICTGNALINM 456
Query: 450 LGRAGKL 456
+ G++
Sbjct: 457 YSKCGQM 463
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 92/180 (51%), Gaps = 13/180 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+L C+ +L QG+ H LK+G ++ N ++N+Y+KCG+M AR FD M
Sbjct: 414 AFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVM 473
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
++ SW+++I GH Q G+ ALE FS+M + P++ F + C + +G+
Sbjct: 474 HTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGE 533
Query: 121 -----QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIA 174
I YS F A + +I M + G +AL ++ FEP+ + + L+A
Sbjct: 534 LFFRLMIDQYS--FTPAPSHYA--CMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLA 589
>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 196/560 (35%), Positives = 315/560 (56%), Gaps = 5/560 (0%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G +H V+K G DV+V++ ++ +YAK + +VFDEM ER++ SW+ +IS +Q
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 81 AGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
+GE ALE F +M PN AISAC+ + L +G++IH +K G+ +V
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYV 245
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
++L+ MY K A V+ + +LV++N++I G+V + E+ M+ +G
Sbjct: 246 NSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGT 305
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
P + + L CS S +L G +H ++ + ++ +V +++ LY K AE
Sbjct: 306 RPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAET 365
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F ++ SWN I++ ++ K + V+ +M + GV+PD TF S+L AC+ LA
Sbjct: 366 VFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVS-VGVKPDVVTFTSVLPACSQLA 424
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
+++ GKQIH + RL D + +AL++MY+KCG ++++FN + ++VVSW +I+
Sbjct: 425 ALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMIS 484
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
A+ +H AL F++M+ G+KPD VT + +L+AC HAGL+ EG +F+ M YGI
Sbjct: 485 AYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIE 544
Query: 438 PDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI-VLGTLLSACRLRRDVVIGERLAK 496
P IEH++C+ID+LGRAG+LLEA E ++ P D +L TL SAC L + +G+R+A+
Sbjct: 545 PIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIAR 604
Query: 497 QLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFT 556
L P S Y++L NLYAS W R +K+ GL+K+P S IE+ F
Sbjct: 605 LLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFF 664
Query: 557 VAEFSHSKIGEINYMLKTLS 576
+ SH + + L LS
Sbjct: 665 AEDRSHLRAENVYECLALLS 684
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 246/481 (51%), Gaps = 9/481 (1%)
Query: 7 SLLHHCSK-TKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
SLL C+ TK+L++ +H +L +G++ DV++ ++N+Y C AR VF+
Sbjct: 8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDI 67
Query: 66 RNLVS-WSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQ 120
R+ V W++++SG+ + LE F ++ +P+ + F + I A + G+
Sbjct: 68 RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGR 127
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IH +K GY V +SL+ MY K ++L V+ E E ++ S+N +I+ F ++
Sbjct: 128 MIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSG 187
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ EK E+F M G P+ S + CS L +G +H VK E + +V +
Sbjct: 188 EAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNS 247
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y K + + A + F+ + K L++WN+ I D + + + M + G R
Sbjct: 248 ALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIE-GTR 306
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P T SIL AC+ ++ HGK IH ++IR +N D+ V +L+++Y KCG + + +
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETV 366
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F++ SWN +I+++ + A+++++QM + G+KPD VTF +L AC+ +
Sbjct: 367 FSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAAL 426
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
++G+ S+ ++ + D + L+D+ + G EA P +D + ++S
Sbjct: 427 EKGKQIHLSISESR-LETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMIS 484
Query: 481 A 481
A
Sbjct: 485 A 485
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L CS+ AL++G +H ++ + ++ D ++ + +L++Y+KCG A ++F+ +
Sbjct: 412 TFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSI 471
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISAC 110
++++VSW+ MIS + G+ AL F +M L P+ + +SAC
Sbjct: 472 PKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSAC 521
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 208/641 (32%), Positives = 325/641 (50%), Gaps = 73/641 (11%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
++ L C + + Q LH +++ P+ + N+++N Y K G + AR VFD + +
Sbjct: 9 TAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQ 68
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYI--FASAISACAG---IQSLVK-- 118
NL SW+ ++S + + G F M PN + + S +S AG I V+
Sbjct: 69 PNLFSWNTLLSAYSKLGYLQDMQRVFDSM---PNHDVVSWNSLLSGYAGNGLISESVRVY 125
Query: 119 -------------------------------GQQIHAYSLKFGYASISFVGNSLISMYMK 147
G+QIH KFGY S FVG+ L+ MY K
Sbjct: 126 NMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAK 185
Query: 148 VGYSSDALLVYGEAFEPNLVSFNALIAGF------VENQQ-----PEK------------ 184
G+ +DA ++ E E N+V +N +I G VE +Q PEK
Sbjct: 186 TGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGL 245
Query: 185 --------GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
+ FK M +G D+F+F L C L +G +H ++ + N
Sbjct: 246 TQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNI 305
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
FVG+ ++ +Y K + AE FR + K++ISW + E+ + +F +M +
Sbjct: 306 FVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRN 365
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
+ PDDFT S++++CA LAS++ G Q H + L V V NAL+ +Y KCG +
Sbjct: 366 E-IHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEH 424
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+++LF+EM R+ VSW +++ +A + LFE M A GI PD VTF+G+L+AC+
Sbjct: 425 AHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSR 484
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
AGLV++G YF M K + I+P +H+TC+IDLL RAG+L EA+ + + P D I
Sbjct: 485 AGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWA 544
Query: 477 TLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSG 536
TLLS+CRL ++ IG+ A+ L L+P + Y+LLS++YA+ G W DVA RK +++ G
Sbjct: 545 TLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMG 604
Query: 537 LKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
+KKEP +S I+ + F+ + S +I L++L L
Sbjct: 605 VKKEPGHSWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYL 645
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 192/411 (46%), Gaps = 37/411 (9%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S++L S + G +H + K G Q + V + ++++YAK G + A ++F+E+
Sbjct: 140 TFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEI 199
Query: 64 SERNLV-------------------------------SWSAMISGHHQAGEHLLALEFFS 92
E+N+V SW+ +I+G Q G A++ F
Sbjct: 200 PEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFK 259
Query: 93 QMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
+M + +++ F S ++AC G +L +G+QIHAY ++ Y FVG++L+ MY K
Sbjct: 260 EMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCR 319
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
A V+ + N++S+ A++ G+ +N E+ +F M R + PD F+ +
Sbjct: 320 NVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVIS 379
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
C+ L +G H + L V N ++ LY K + A + F ++ +D +S
Sbjct: 380 SCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVS 439
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
W ++ + + +S+F+ M HG+ PD TF +L+AC+ V+ G +
Sbjct: 440 WTALVSGYAQFGKANETISLFETMLA-HGIVPDGVTFVGVLSACSRAGLVEKGYHYFECM 498
Query: 330 IR-MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAA 378
++ R+ ++++ ++ G + + N+M + + W T++++
Sbjct: 499 VKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSS 549
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 155/320 (48%), Gaps = 11/320 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S+L C AL +G +HA +++ Q ++ V + +L++Y KC + A VF +M
Sbjct: 272 TFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKM 331
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+N++SW+AM+ G+ Q G A+ F M + P+++ S IS+CA + SL +G
Sbjct: 332 RHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGA 391
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q H +L G V N+LI++Y K G A ++ E + VS+ AL++G+ +
Sbjct: 392 QFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFG 451
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVG 239
+ + +F+ ML G++PD +F G L CS + + KG C+ + ++ P
Sbjct: 452 KANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHY 511
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEE----KDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
++ L S+ G E+A I + D I W T +++C + E G + +
Sbjct: 512 TCMIDLLSR---AGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHK 568
Query: 296 DHGVRPDDFTFASILAACAG 315
P + S + A G
Sbjct: 569 LEPQNPASYILLSSIYAAKG 588
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 108/258 (41%), Gaps = 35/258 (13%)
Query: 204 FAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIE 263
+ L+ C + + + LHC ++ F+ N ++ Y K + A F I
Sbjct: 8 YTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIP 67
Query: 264 EKDLISWNTFIAACSHCADYEKGLSVFKEMSN---------------------------- 295
+ +L SWNT ++A S + VF M N
Sbjct: 68 QPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNM 127
Query: 296 ---DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
D V + TF+++L + V G+QIH + + + VG+ LV+MYAK G
Sbjct: 128 MLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTG 187
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
I+ + ++F E+ +N+V +NT+I R A +LF+ M + DS+++ ++T
Sbjct: 188 FINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMP----EKDSISWTTIIT 243
Query: 413 ACNHAGLVKEGEAYFNSM 430
GL KE F M
Sbjct: 244 GLTQNGLFKEAVDKFKEM 261
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 69/149 (46%), Gaps = 4/149 (2%)
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
+ + L C + K++H +IR N + + N L+N Y K G + + +F+ +
Sbjct: 8 YTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIP 67
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
N+ SWNT+++A++ ++F+ M D V++ LL+ GL+ E
Sbjct: 68 QPNLFSWNTLLSAYSKLGYLQDMQRVFDSMP----NHDVVSWNSLLSGYAGNGLISESVR 123
Query: 426 YFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
+N M K ++ + F+ ++ L G
Sbjct: 124 VYNMMLKDGSVNLNRITFSTMLILSSNRG 152
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 201/612 (32%), Positives = 320/612 (52%), Gaps = 42/612 (6%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMI-------- 54
+S +L C K L G SLH LK I +SNH + LY+KC +
Sbjct: 9 QSFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQ 68
Query: 55 -----------------------LARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFF 91
+A +FD++ + +LVS++ +I+ + G+ L AL F
Sbjct: 69 THEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLF 128
Query: 92 SQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKV 148
+M L+ + + F+ I+AC L++ Q+H+ + G+ S V NSL++ Y K
Sbjct: 129 GEMREMGLVMDGFTFSGVITACCNHVGLIR--QLHSLAFSSGFDSYVSVKNSLLTYYSKN 186
Query: 149 GYSSDALLVYGEAFEP--NLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAG 206
G +A +V+ E + VS+N++I + ++++ K +++ M+ +G D F+ A
Sbjct: 187 GILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLAS 246
Query: 207 GLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL-IGEAEKAFRLIEEK 265
L S DL G+ H +K N VG+ ++ +Y+K + E+ K F I
Sbjct: 247 VLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGS 306
Query: 266 DLISWNTFIAACSHCADYE-KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ 324
DL+ WNT I+ S + + L F++M G PDD +F ++AC+ L+S GKQ
Sbjct: 307 DLVVWNTMISGYSQNKELSVEALECFRQMQRA-GYWPDDCSFVCAISACSNLSSPSQGKQ 365
Query: 325 IHAHLIRMRL-NQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR 383
HA ++ + + + V NALV MY+KCG + + KLF M N V+ N+IIA +A H
Sbjct: 366 FHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHG 425
Query: 384 LGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF 443
+G +L LFEQM A I P S+T + +L+AC H G V+EG+ YFN M+ +GI P+ EH+
Sbjct: 426 IGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHY 485
Query: 444 TCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQP 503
+C+IDLLGRAGKL EAE P LL ACR ++ + E+ A Q L+P
Sbjct: 486 SCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEP 545
Query: 504 TTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHS 563
T PY++L+++Y++ W + A RK+++D G++K+P S IE+ F + SH
Sbjct: 546 TNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHP 605
Query: 564 KIGEINYMLKTL 575
+I EI+ L +
Sbjct: 606 RIKEIHMYLDEM 617
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 188/573 (32%), Positives = 324/573 (56%), Gaps = 7/573 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
++ LL+ +T++L+ +H ++ + N+++NLYAKCG + A +F
Sbjct: 145 LNHLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITH 204
Query: 65 E--RNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKG 119
+ +V+W+++I+ HL AL F+QM PN++ F+S +SA A ++ G
Sbjct: 205 HHFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHG 264
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
QQ+H+ K G+ + FVG +L+ MY K A+ V+ + E NLVS+N++I GF N
Sbjct: 265 QQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHN 324
Query: 180 QQPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
++ VFK +LR+ ++P+ S + L C+ L G +H + VK L +V
Sbjct: 325 NLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYV 384
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N++M +Y K E K F+ + ++D+++WN + +E+ + F M + G
Sbjct: 385 MNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRRE-G 443
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ PD+ +F+++L + A LA++ G IH +I++ +++ + +L+ MYAKCG + +Y
Sbjct: 444 ILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAY 503
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
++F + NV+SW +I+A+ H ++LFE M + GI+P VTF+ +L+AC+H G
Sbjct: 504 QVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTG 563
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
V+EG A+FNSM+K + ++P EH+ C++DLLGRAG L EA+ + + P+ P V G L
Sbjct: 564 RVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGAL 623
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L ACR ++ +G A++LF ++P YVLL+N+ G + R+++ +G++
Sbjct: 624 LGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVR 683
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYM 571
KEP S I+V+ FT + SHS EI M
Sbjct: 684 KEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKM 716
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 126/470 (26%), Positives = 227/470 (48%), Gaps = 50/470 (10%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+L + T + G LH+ + K G ++ V ++++YAKC M A +VFD+M
Sbjct: 247 TFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQM 306
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKG 119
ERNLVSW++MI G + A+ F + ++PNE +S +SACA + L G
Sbjct: 307 PERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFG 366
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+H +K+G +++V NSL+ MY K + + + ++ + ++V++N L+ GFV+N
Sbjct: 367 RQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQN 426
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ E+ F +M R+G+LPD SF+ L + L +G +H +K N +
Sbjct: 427 DKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCIL 486
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+++ +Y+K + +A + F IE+ ++ISW I+A + + +F+ M ++ G+
Sbjct: 487 GSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSE-GI 545
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN----ALVNMYAKCGLIS 355
P TF +L+AC+ V+ G AH M+ D+ G +V++ + G +
Sbjct: 546 EPSHVTFVCVLSACSHTGRVEEGL---AHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLD 602
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
A + E M +KP + LL AC
Sbjct: 603 -------------------------------EAKRFIESMP---MKPTPSVWGALLGACR 628
Query: 416 HAGLVKEGEAYFNSMEKTYGISP-DIEHFTCLIDLLGRAGKLLEAEEYTK 464
G +K G + E+ + + P + ++ L ++ R+G+L EA E +
Sbjct: 629 KYGNLKMGR---EAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRR 675
>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
Length = 1215
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 193/571 (33%), Positives = 313/571 (54%), Gaps = 5/571 (0%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++ SL+ C+ + G +H+ L+ + V V N ++N+Y+ GK+ A +F
Sbjct: 548 ATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFW 607
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
MS R+L+SW+ MIS + Q AL+ Q+ + PN F+SA+ AC+ +L+
Sbjct: 608 NMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALID 667
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ +HA L+ VGNSLI+MY K DA V+ ++VS+N LI G+
Sbjct: 668 GKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAV 727
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRK-GMILHCLTVKCKLESNPF 237
+ K +VF M G+ P+ + + SNDL G LH ++ S+ +
Sbjct: 728 LEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEY 787
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N+++ +Y+K + + F I K+++SWN IAA E+ L +F +M +
Sbjct: 788 VANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHA- 846
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G + D A L++CA LAS++ G Q+H ++ L+ D V NA ++MY KCG +
Sbjct: 847 GNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEM 906
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++ + R WNT+I+ +A + A + F+QM ATG KPD VTF+ LL+AC+HA
Sbjct: 907 LQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHA 966
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV +G Y+NSM ++G+SP I+H C++DLLGR G+ EAE++ ++ P+ + ++ +
Sbjct: 967 GLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRS 1026
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LLS+ R +++ IG + AK+L L P S YVLLSNLYA++ W DV R +K +
Sbjct: 1027 LLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTINI 1086
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
K P+ S ++++ F + + H +I
Sbjct: 1087 NKRPACSWLKLKNEVSTFGIGDRGHKHAEKI 1117
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 135/461 (29%), Positives = 231/461 (50%), Gaps = 6/461 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + ++++ C + G+ + + V+ G+Q V V+N ++ ++ G++ A K+FD
Sbjct: 447 ANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFD 506
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
M E + +SW+AMIS + G FS M L P+ S +S CA
Sbjct: 507 RMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSH 566
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G IH+ L+ S V N+L++MY G SDA ++ +L+S+N +I+ +V+
Sbjct: 567 GSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQ 626
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N + + P+ +F+ L CS L G ++H + ++ L+ N V
Sbjct: 627 NCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLV 686
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
GN+++ +Y K N + +AEK F+ + D++S+N I + D K + VF M + G
Sbjct: 687 GNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSA-G 745
Query: 299 VRPDDFTFASILAACAGLASVQ-HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
++P+ T +I + A + +G+ +HA++IR D V N+L+ MYAKCG + S
Sbjct: 746 IKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESS 805
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+FN + ++N+VSWN IIAA+ G ALKLF M+ G K D V L++C
Sbjct: 806 TNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASL 865
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLE 458
++EG + + G+ D +D+ G+ GK+ E
Sbjct: 866 ASLEEG-MQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDE 905
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 222/413 (53%), Gaps = 7/413 (1%)
Query: 4 SISSLLHHCSK---TKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
+++SL+ C + + + G ++HA + G+ +V + +L+LY G + A+++F
Sbjct: 345 ALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLF 404
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL--LP-NEYIFASAISACAGIQSLV 117
EM ERN+VSW+A++ G AL + QM +P N FA+ +S C +++ V
Sbjct: 405 WEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEV 464
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G Q+ + + G + V NSLI+M+ +G DA ++ E + +S+NA+I+ +
Sbjct: 465 PGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYS 524
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
K F VF M GL PD + + +C+ S+ G +H L ++ L+S+
Sbjct: 525 HQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVT 584
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N ++ +YS + +AE F + +DLISWNT I++ + L ++ + +
Sbjct: 585 VINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTN 644
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
P+ TF+S L AC+ ++ GK +HA ++++ L +++ VGN+L+ MY KC + +
Sbjct: 645 E-SPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDA 703
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGL 410
K+F M ++VS+N +I +A G A+++F M++ GIKP+ +T I +
Sbjct: 704 EKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINI 756
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 208/415 (50%), Gaps = 8/415 (1%)
Query: 59 VFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL--LP-NEYIFASAISAC---AG 112
+FDEM++R +W +SG + G H A E M +P + + AS ++AC
Sbjct: 299 LFDEMADRTPSTWYTAVSGCVRCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGR 358
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
+ + G IHA + + G ++G +L+ +Y G SDA ++ E E N+VS+ AL
Sbjct: 359 DEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTAL 418
Query: 173 IAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
+ N E+ ++ M R G+ + +FA + +C + G+ + + L
Sbjct: 419 MVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGL 478
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
++ V N+++ ++ + +AEK F +EE D ISWN I+ SH K VF +
Sbjct: 479 QNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSD 538
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
M + HG+RPD T S+++ CA HG IH+ +R L+ V V NALVNMY+ G
Sbjct: 539 MRH-HGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAG 597
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
+S + LF M R+++SWNT+I+++ + ALK Q+ T P+ +TF L
Sbjct: 598 KLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALG 657
Query: 413 ACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
AC+ G + +G+ +++ + ++ LI + G+ + +AE+ + P
Sbjct: 658 ACSSPGALIDGK-MVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMP 711
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 180/393 (45%), Gaps = 12/393 (3%)
Query: 122 IHAYSLKFGYASISFVGNSLISMYMK---VGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
IH +++ +F N+L++ Y + ++ AL ++ E + ++ ++G V
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 320
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSV---SNDLRKGMILHCLTVKCKLESN 235
K FE+ + M G+ F+ A + C + G +H LT + L N
Sbjct: 321 CGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGN 380
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
++G ++ LY ++ +A++ F + E++++SW + A S E+ L +++M
Sbjct: 381 VYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRR 440
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
D GV + FA++++ C L + G Q+ + +I L V V N+L+ M+ G +
Sbjct: 441 D-GVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVH 499
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ KLF+ M + +SWN +I+ +++ + +F M+ G++PD+ T L++ C
Sbjct: 500 DAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCA 559
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
+ G +S+ + + L+++ AGKL +AE +D I
Sbjct: 560 SSDHFSHGSG-IHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSR-RDLISW 617
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSP 508
T++S+ + + QLFH T SP
Sbjct: 618 NTMISSYVQNCNSTDALKTLGQLFH---TNESP 647
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 7/131 (5%)
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE---KDLISWNTFIAACSH 279
+H L V+ L + F NT++A Y + A A L +E + +W T ++ C
Sbjct: 38 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 97
Query: 280 CADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA---SVQHGKQIHAHLIRMRLNQ 336
C + + M + GV F AS++ AC + G IHA R L
Sbjct: 98 CGRDGTAFEMLRGM-RERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMG 156
Query: 337 DVGVGNALVNM 347
+V +G AL+++
Sbjct: 157 NVYIGRALLHL 167
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 182/575 (31%), Positives = 321/575 (55%), Gaps = 5/575 (0%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+ S L C + ++ G H V+K+G+ D V ++++YAKCG++ A +V+D+M+
Sbjct: 116 VFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMT 175
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQ---MHLLPNEYIFASAISACAGIQSLVKGQQ 121
+ + + +IS + + G + A + F Q M PN Y +++ ++ C I ++ +G+Q
Sbjct: 176 SLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQ 235
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+HA+ +K Y S + VGN+L+++Y K G +A +V+ + N++S+ A I GF ++
Sbjct: 236 LHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGD 295
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+K + F +M G+ P+ F+F+ L C D G + H +K + S FVG
Sbjct: 296 FKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTA 355
Query: 242 IMALYSKFNLIGEAEKAFRLI-EEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
I+ +YS + EAEK F+ + +SWN IA EK + F M + V
Sbjct: 356 IIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKED-VA 414
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
++FT+++I AC+ S+ QIH+ LI+ + ++ V ++L+ Y +CG + + ++
Sbjct: 415 CNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQV 474
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F ++ +VVSWN+II A++ + A+ L +M G KP S TF+ +L+AC+H+GLV
Sbjct: 475 FTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLV 534
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+EG+ +F SM + Y I P+ H +C++D+LGRAG+L A ++ KK + + LL+
Sbjct: 535 QEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLA 594
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR ++ + E +A+++ L+P + YV LSN+YA G W D R++++ + KE
Sbjct: 595 ACRYNSNLQMAEYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEISKE 654
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P S IEV KF + +H ++ ++ LK L
Sbjct: 655 PGCSWIEVNNKMYKFFSHDKAHPEMPKVYEKLKQL 689
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 168/515 (32%), Positives = 257/515 (49%), Gaps = 71/515 (13%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+A AI A ++L +G+ +HA+ + G A +++ L+S Y + G S+A ++ +
Sbjct: 806 YAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIP 865
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
N+ + L E+ F M ++GL P++F L+ C +D R G
Sbjct: 866 NTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGEN 925
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLI-------------- 268
+H + +K ES+ ++ + ++ +YSK + +A + F I +KDL+
Sbjct: 926 MHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGF 985
Query: 269 ---------------------SWNTFIAACSHCADYE----------------------- 284
SWNT IA S D
Sbjct: 986 VHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTS 1045
Query: 285 ------------KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
+G FKEM D G P T +S+L AC +A+++HGK+IH + + +
Sbjct: 1046 VISGFVQNFHNHEGFDAFKEML-DQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVI 1104
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
+ +DV V +ALV+MYAKCG IS + LF M RN V+WN++I +ANH A++LF
Sbjct: 1105 GVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELF 1164
Query: 393 EQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
QM+ + K D +TF +L AC+HAG+V+ GE+ F M++ Y I P +EH+ C++DLLGR
Sbjct: 1165 NQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGR 1224
Query: 453 AGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLL 512
AGKL EA + K P+ D V G LL ACR ++ + E A+ LF L+P + +LL
Sbjct: 1225 AGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLL 1284
Query: 513 SNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIE 547
SNLYA G WG+ A +KM+K K P S IE
Sbjct: 1285 SNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 1319
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 163/317 (51%), Gaps = 3/317 (0%)
Query: 100 EYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG 159
+Y+F SA+S C + G++ H + +K G S FV SLI MY K G A+ VY
Sbjct: 114 QYVF-SALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYD 172
Query: 160 EAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRK 219
+ + + N LI+ + N + F+VF + G P+ ++++ L +C + +++
Sbjct: 173 KMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQE 232
Query: 220 GMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSH 279
G LH VK + S VGN ++ LYSK ++ EAE F + ++++ISW I
Sbjct: 233 GKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQ 292
Query: 280 CADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG 339
D++K L F M + G+ P++FTF+ +LA+C + G+ H +I+ + V
Sbjct: 293 HGDFKKALKQFS-MMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVF 351
Query: 340 VGNALVNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
VG A+++MY+ G + + K F +M + VSWN +IA + + A++ F +M
Sbjct: 352 VGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKE 411
Query: 399 GIKPDSVTFIGLLTACN 415
+ + T+ + AC+
Sbjct: 412 DVACNEFTYSNIFKACS 428
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 156/323 (48%), Gaps = 16/323 (4%)
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
F N+ P F G P R L C + G HC VK L S+
Sbjct: 96 FTRNETPHVEF--------GGGFPHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSD 147
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
FV +++ +Y+K + A + + + D + N I+A + + + VF ++ N
Sbjct: 148 EFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGN 207
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
G RP+ +T++++LA C ++++Q GKQ+HAH+++M+ + VGNAL+ +Y+KCG++
Sbjct: 208 -MGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMME 266
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ +F + RN++SW I H ALK F M+ +GI+P+ TF +L +C
Sbjct: 267 EAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCG 326
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
+G + + K G++ + T +ID+ G++ EAE+ K+ +
Sbjct: 327 CVKDFIDGRMFHTQVIKK-GMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSW 385
Query: 476 GTLLSACRLRRDVVIGERLAKQL 498
L++ V+ E++ K +
Sbjct: 386 NALIAG------YVLNEKIEKAM 402
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 185/380 (48%), Gaps = 31/380 (8%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+ S+L C + G ++H +LK + D + + ++ +Y+KCG + A +VFD +
Sbjct: 907 LPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIV 966
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHA 124
+++LV +AM+SG+ Q G AL+ +M Q+ VK +
Sbjct: 967 DKDLVVMNAMVSGYAQHGFVHEALBLVQKMQ------------------QAGVKPNVVSW 1008
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+L G++ + S++S + L+ EP++VS+ ++I+GFV+N +
Sbjct: 1009 NTLIAGFSQVG--DKSMVSEVFR--------LMTANGVEPDVVSWTSVISGFVQNFHNHE 1058
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
GF+ FK ML QG P + + L C+ +LR G +H + +E + +V + ++
Sbjct: 1059 GFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVD 1118
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y+K I EA+ F ++ E++ ++WN+ I ++ + + +F +M + + D
Sbjct: 1119 MYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQM-EESDTKLDHL 1177
Query: 305 TFASILAACAGLASVQHGKQIHAHLI-RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
TF ++L AC+ V+ G+ + + + R+ + +V++ + G +S +Y L
Sbjct: 1178 TFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKA 1237
Query: 364 M-LHRNVVSWNTIIAAHANH 382
M + + W ++ A NH
Sbjct: 1238 MPVEPDKFVWGALLGACRNH 1257
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 123/245 (50%), Gaps = 2/245 (0%)
Query: 203 SFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLI 262
++A +++ + L +G LH V L + +M+ Y++ + A K F I
Sbjct: 805 TYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKI 864
Query: 263 EEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG 322
++ W AC+ YE+ LS F EM + G+RP+ F SIL AC L+ + G
Sbjct: 865 PNTNIRRWIVLTGACARRGFYEEALSAFSEMQKE-GLRPNQFVLPSILKACGHLSDRRTG 923
Query: 323 KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH 382
+ +H +++ D + +AL+ MY+KCG + + ++F+ ++ +++V N +++ +A H
Sbjct: 924 ENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQH 983
Query: 383 RLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEH 442
AL L ++M+ G+KP+ V++ L+ + G F M G+ PD+
Sbjct: 984 GFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTAN-GVEPDVVS 1042
Query: 443 FTCLI 447
+T +I
Sbjct: 1043 WTSVI 1047
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 154/358 (43%), Gaps = 49/358 (13%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S +L C K G H V+K G+ V V ++++Y+ G+M A K F +M
Sbjct: 317 TFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQM 376
Query: 64 SE-RNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
+ VSW+A+I+G+ + A+E F +M + NE+ +++ AC+ SL
Sbjct: 377 GRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATT 436
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
QIH+ +K S V +SLI Y + G +A+ V+ + + ++VS+N++I + +N
Sbjct: 437 VQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQN 496
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
P K + + M+ +G P +F L CS S
Sbjct: 497 GDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHS------------------------- 531
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC-----SHCADYEKGLSVFKEMS 294
L+ E ++ F+ + + I +C E L K+++
Sbjct: 532 ----------GLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLT 581
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
++P + +LAAC +++Q + + ++ + N D V L NMYA+ G
Sbjct: 582 ----MKPTASIWRPLLAACRYNSNLQMAEYVAEKILDLEPN-DATVYVTLSNMYAEVG 634
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ISSLL C+ L+ G +H + +G++ DV V + ++++YAKCG + A+ +F M
Sbjct: 1077 TISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMM 1136
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACA 111
ERN V+W+++I G+ G A+E F+QM + F + ++AC+
Sbjct: 1137 PERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACS 1187
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 66/136 (48%)
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMY 348
V++ +S + T+A + A ++ G+ +HAHL+ + L + L++ Y
Sbjct: 789 VYRNISTHRTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFY 848
Query: 349 AKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
+CG +S + KLF+++ + N+ W + A A AL F +M+ G++P+
Sbjct: 849 TECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLP 908
Query: 409 GLLTACNHAGLVKEGE 424
+L AC H + GE
Sbjct: 909 SILKACGHLSDRRTGE 924
>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
Length = 913
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 192/588 (32%), Positives = 308/588 (52%), Gaps = 16/588 (2%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
K I+ LL +K +L+ G+ LH A+ K+G D ++ N+++++YAKCG++ +A +VF
Sbjct: 218 KMIADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGG 277
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISACAGIQSLVK 118
M +RN+VSW+A++ G Q G+ L +M PNEY ++++ AC + +
Sbjct: 278 MRDRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGA 337
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA-FEPNLVSFNALIAGFV 177
G IH ++ GY V +SL+ +Y K G DA V+ A L ++NA+I+G+
Sbjct: 338 GVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYA 397
Query: 178 ENQQPEKGFEVFKLMLRQGLL------PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK 231
VF+ M R+ PD F+FA L+ C R+G +H
Sbjct: 398 HAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASG 457
Query: 232 LE--SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSV 289
SN + ++ +Y K + A + F +E K+ I W T + + + L +
Sbjct: 458 FSTASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALEL 517
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
F+ G R D +SI+ A A V+ G+Q+H + ++ DV GN++V+MY
Sbjct: 518 FRRFWRS-GARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYL 576
Query: 350 KCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
KCGL + ++F E+ RNVVSW T+I H LG A+ +FE+M+A G++PD VT++
Sbjct: 577 KCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLA 636
Query: 410 LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLG 469
LL+AC+HAGLV E YF+ + + + P EH+ C++DLLGRAG+L EA + + P+
Sbjct: 637 LLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPME 696
Query: 470 QDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGAR 529
V TLLSACR+ +DV +G L + YV LSN++A G W + R
Sbjct: 697 PTVGVWQTLLSACRVHKDVAVGREAGDVLLAIDGDNPVNYVTLSNVFAEAGAWRECHKVR 756
Query: 530 KMLKDSGLKKEPSYSMIEVQGTFEKFTVA--EFSHSKIGEINYMLKTL 575
++ GLKK+ S +E+ F E +H + G+I +L+ +
Sbjct: 757 DAMRRRGLKKQGGCSWVEIGKEVHFFYGGGDEEAHPQAGDIRRVLRDV 804
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A +SS++ + ++QG +H +K DV N ++++Y KCG A ++F
Sbjct: 530 AHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFR 589
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
E+ RN+VSW+ MI+G + G A+ F +M + P+E + + +SAC+
Sbjct: 590 EIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSACS 642
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 205/569 (36%), Positives = 312/569 (54%), Gaps = 9/569 (1%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
CS K L + LHA + G +V V + +++LY K +++ ARKVFD M ER+ V W
Sbjct: 121 CSNDKHL---MLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLW 177
Query: 72 SAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
+ MI+G + +++ F +M + + + + A A +Q L G I +LK
Sbjct: 178 NTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALK 237
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
G+ +V LIS+Y K G + A L++ P+L+++NA+I+GF N E ++
Sbjct: 238 IGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKL 297
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
F+ +L G + G + + S L +H VK + NP V A+Y+K
Sbjct: 298 FRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNK 357
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
N I A F EK +++WN I+ + E +S+FKEM P+ T +
Sbjct: 358 LNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTE-FTPNAVTITT 416
Query: 309 ILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR 367
IL+ACA L S+ GK +H HLI+ L ++ V ALV+MYAKCG IS +++LF+ M +
Sbjct: 417 ILSACAQLGSLSFGKWVH-HLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEK 475
Query: 368 NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYF 427
N V+WNT+I + H G ALKL+ +M G P +VTF+ +L AC+HAGLV EGE F
Sbjct: 476 NTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIF 535
Query: 428 NSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRD 487
++M Y I P IEH+ C++D+LGR+G+L +A E+ KK P+ P V GTLL AC + +D
Sbjct: 536 HNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKD 595
Query: 488 VVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIE 547
I +++LF L P + YVLLSN+Y+ + + A R+++K L K P ++IE
Sbjct: 596 TDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIE 655
Query: 548 VQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
V GT F + SHS +I L+ L+
Sbjct: 656 VNGTPHVFVSGDRSHSHATDIYAKLEKLT 684
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 200/421 (47%), Gaps = 18/421 (4%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ +++++L ++ + L+ G+ + LK+G V +++LY+KCG + AR +F
Sbjct: 209 SSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFR 268
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQS----LV 117
++ +L++++AMISG G +++ F ++ L E + +S I + S L
Sbjct: 269 RINRPDLIAYNAMISGFTANGGTECSVKLFREL-LFSGERVSSSTIVGLIPLHSPFGHLH 327
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
IH + +K G V + ++Y K+ A ++ E+ E +V++NA+I+G+
Sbjct: 328 LACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYT 387
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+N E +FK M++ P+ + L C+ L G +H L LE N +
Sbjct: 388 QNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIY 447
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V ++ +Y+K I EA + F + EK+ ++WNT I + L ++ EM +
Sbjct: 448 VSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLH-L 506
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLI-RMRLNQDVGVGNALVNMYAKCGLISC 356
G P TF S+L AC+ V G++I +++ + R+ + +V++ + G +
Sbjct: 507 GYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEK 566
Query: 357 SYKLFNEM-LHRNVVSWNTIIAAHANHRLGGSAL----KLFEQMKATGIKPDSVTFIGLL 411
+ + +M + W T++ A H+ A +LFE + P SV + LL
Sbjct: 567 ALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFE------LDPGSVGYYVLL 620
Query: 412 T 412
+
Sbjct: 621 S 621
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 130/250 (52%), Gaps = 5/250 (2%)
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGM 221
+P++ FN L+ GF N P ++ + R L PD F++A + C SND + M
Sbjct: 72 KPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAAC--SND-KHLM 128
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
+LH ++ SN FVG+ ++ LY KF+ + A K F + E+D + WNT I
Sbjct: 129 LLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNC 188
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
++ + +F+EM D GVR D T ++L A A L ++ G I +++ V
Sbjct: 189 CFDDSIQLFREMVAD-GVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVL 247
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
L+++Y+KCG ++ + LF + +++++N +I+ + ++KLF ++ +G +
Sbjct: 248 TGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGER 307
Query: 402 PDSVTFIGLL 411
S T +GL+
Sbjct: 308 VSSSTIVGLI 317
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 3/165 (1%)
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
F+ A F + + D+ +N + S +S++ + + + PD+FT+A
Sbjct: 57 FSATRHARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAF 116
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
+AAC+ + +H +HAH I +V VG+ALV++Y K + + K+F+ M R+
Sbjct: 117 AVAACS---NDKHLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERD 173
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
V WNT+I + +++LF +M A G++ DS T +L A
Sbjct: 174 TVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPA 218
>gi|297802780|ref|XP_002869274.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
lyrata]
gi|297315110|gb|EFH45533.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
lyrata]
Length = 686
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 195/587 (33%), Positives = 323/587 (55%), Gaps = 18/587 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + S+ L C ++ + G+ L + V+K G++ D++V N + +Y++ G AR+VFD
Sbjct: 99 AFTYSTALSFCVGSEGFRLGLQLQSTVVKSGLESDLVVGNSFITMYSRSGSFRGARRVFD 158
Query: 62 EMSERNLVSWSAMISGHHQAG----EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLV 117
EM ++++SW++++SG Q G E +L + + + F S I+ C L
Sbjct: 159 EMPFKDMISWNSLLSGLSQEGTFGFEAVLIFRDMMREGVELDHVSFTSVITTCCHETDLK 218
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+QIH +K GY S+ VGN L+S Y K G V+ + E N+VS+ +I+
Sbjct: 219 LARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFYQMSERNVVSWTTMIS--- 275
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ +F M G+ P+ +F G L + +++G+ +H L +K S P
Sbjct: 276 --SNRDDAVSIFLNMRLDGVYPNEVTFVGLLNAVKCNEQIKEGLKIHGLCIKTGFVSEPS 333
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
VGN+ + +Y+KF + +A+KAF I +++ISWN I+ + + L +F +S
Sbjct: 334 VGNSFITMYAKFEALEDAKKAFDDITFREIISWNAMISGFAQNGFSHEALKMF--LSATA 391
Query: 298 GVRPDDFTFASILAACAGLA--SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
P+++TF S+L A A SV+HG++ HAHL+++ LN V +AL++MYAK G I+
Sbjct: 392 ETMPNEYTFGSVLNAIAFAEDISVKHGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIN 451
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
S K+FNEM RN W +II+A+++H S + LF +M + PD VTF+ +LTACN
Sbjct: 452 ESEKVFNEMSQRNQFVWTSIISAYSSHGDFNSVMNLFHEMIKENVAPDLVTFLSVLTACN 511
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
G+V +G N M + Y + P EH++C++D+LGRAG+L EAEE + P G +L
Sbjct: 512 RKGMVDKGHEILNMMIEDYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESML 571
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
++L +CRL +V +G ++A+ ++P + YV + N+YA W A RK ++
Sbjct: 572 QSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEQWDKAAEIRKAMRKK 631
Query: 536 GLKKEPSYSMIEVQG-----TFEKFTVAEFSHSKIGEINYMLKTLSL 577
+ KE +S I+V T + F+ + SH K EI M++ + L
Sbjct: 632 NVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIVGL 678
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/452 (28%), Positives = 233/452 (51%), Gaps = 21/452 (4%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L++G +H G V VSN V+ +Y K G+ A +F+ + + ++VSW+ ++SG
Sbjct: 17 LKRGCQIHGFSTTCGFTSFVCVSNAVMGMYRKAGRFDNALYIFENLVDPDVVSWNTILSG 76
Query: 78 HHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
++ +AL F +M ++ + + +++A+S C G + G Q+ + +K G S
Sbjct: 77 FD---DNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFRLGLQLQSTVVKSGLESD 133
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE---VFKL 191
VGNS I+MY + G A V+ E +++S+N+L++G +Q+ GFE +F+
Sbjct: 134 LVVGNSFITMYSRSGSFRGARRVFDEMPFKDMISWNSLLSGL--SQEGTFGFEAVLIFRD 191
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
M+R+G+ D SF + C DL+ +H L +K ES VGN +M+ YSK +
Sbjct: 192 MMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGV 251
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ + F + E++++SW T I+ ++ + +S+F M D GV P++ TF +L
Sbjct: 252 LEAVKSVFYQMSERNVVSWTTMIS-----SNRDDAVSIFLNMRLD-GVYPNEVTFVGLLN 305
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
A ++ G +IH I+ + VGN+ + MYAK + + K F+++ R ++S
Sbjct: 306 AVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITMYAKFEALEDAKKAFDDITFREIIS 365
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG--LVKEGEAYFNS 429
WN +I+ A + ALK+F A + P+ TF +L A A VK G+
Sbjct: 366 WNAMISGFAQNGFSHEALKMFLSATAETM-PNEYTFGSVLNAIAFAEDISVKHGQRCHAH 424
Query: 430 MEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ K G++ + L+D+ + G + E+E+
Sbjct: 425 LLK-LGLNSCPVVSSALLDMYAKRGNINESEK 455
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 173/326 (53%), Gaps = 12/326 (3%)
Query: 99 NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY 158
+E A+ AC G L +G QIH +S G+ S V N+++ MY K G +AL ++
Sbjct: 2 DEVTLCLALKACRG--DLKRGCQIHGFSTTCGFTSFVCVSNAVMGMYRKAGRFDNALYIF 59
Query: 159 GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLR 218
+P++VS+N +++GF +NQ M G++ D F+++ L C S R
Sbjct: 60 ENLVDPDVVSWNTILSGFDDNQ---IALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFR 116
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
G+ L VK LES+ VGN+ + +YS+ A + F + KD+ISWN+ ++ S
Sbjct: 117 LGLQLQSTVVKSGLESDLVVGNSFITMYSRSGSFRGARRVFDEMPFKDMISWNSLLSGLS 176
Query: 279 HCADYE-KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD 337
+ + + +F++M + GV D +F S++ C ++ +QIH I+
Sbjct: 177 QEGTFGFEAVLIFRDMMRE-GVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESL 235
Query: 338 VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA 397
+ VGN L++ Y+KCG++ +F +M RNVVSW T+I+++ + A+ +F M+
Sbjct: 236 LEVGNILMSRYSKCGVLEAVKSVFYQMSERNVVSWTTMISSNRD-----DAVSIFLNMRL 290
Query: 398 TGIKPDSVTFIGLLTACNHAGLVKEG 423
G+ P+ VTF+GLL A +KEG
Sbjct: 291 DGVYPNEVTFVGLLNAVKCNEQIKEG 316
>gi|224132434|ref|XP_002328268.1| predicted protein [Populus trichocarpa]
gi|222837783|gb|EEE76148.1| predicted protein [Populus trichocarpa]
Length = 749
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 188/574 (32%), Positives = 319/574 (55%), Gaps = 8/574 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
++ C G+ LH ++K G V N +L++Y M AR++FDEM E++
Sbjct: 155 VIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVD-ADMECARELFDEMHEKD 213
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLLP----NEYIFASAISACAGIQSLVKGQQIH 123
+++WS MI G+ Q E + L+ F +M L+P + + S + ACA + + G+ +H
Sbjct: 214 VIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVH 273
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ G+ FV NSLI MY K + A V+ E + N VS+N++++GFV N+
Sbjct: 274 GLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYS 333
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ + M ++ + D + L+IC +HC+ ++ E+N V + ++
Sbjct: 334 EAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIHCVMIRRGSEANELVLSALI 393
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
Y+K LI A + F + +D++SW+T I+ +HC ++ ++V++EM D V+P+
Sbjct: 394 DAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDL-VKPNV 452
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T ++L AC+ A ++ K H IR +V VG A+V+MY+KCG I S + F++
Sbjct: 453 ITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQ 512
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
+ +N+V+W+ +IAA+ + L AL LF +MK G+KP+ VT + +L AC+H GLV+EG
Sbjct: 513 LALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEG 572
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP--LGQDPIVLGTLLSA 481
+ F SM + G+ P EH++C++D+LGRAGKL A E K P L + G+LLSA
Sbjct: 573 LSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMPHNLKNGASIWGSLLSA 632
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
CR +G+ ++ L+P+ ++ Y++ S++YA+DG+W D A R + K+ G+K
Sbjct: 633 CRSYGLTELGKEAISRVLELEPSNSAGYLVASSMYAADGLWDDAARIRVLAKEKGVKVVA 692
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
YS++ + +F + SH + EI M + L
Sbjct: 693 GYSLVHIDNKACRFVAGDGSHPRSDEIFSMAQQL 726
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 237/455 (52%), Gaps = 8/455 (1%)
Query: 19 QQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE-RNLVSWSAMISG 77
+ G SLHA ++K G + N ++ Y +CG +A VF+ M R+ VSW+ +I G
Sbjct: 64 RHGKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHG 123
Query: 78 HHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
H G + L +F+ + PN I AC + + G +H Y +K G+ +I
Sbjct: 124 HLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAI 183
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVF-KLML 193
S V NSL+SMY+ A ++ E E ++++++ +I G+++ ++P+ G ++F K++L
Sbjct: 184 SSVQNSLLSMYVDADMEC-ARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVL 242
Query: 194 RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
G+ PD L+ C+ S D+ G ++H L + + + FV N+++ +YSK G
Sbjct: 243 VPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAG 302
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
A K F I +++ +SWN+ ++ +Y + S+ M + V D+ T +IL C
Sbjct: 303 SAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKER-VETDEVTLVNILQIC 361
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
H K IH +IR + V +AL++ YAKC LI ++++F M R+VVSW+
Sbjct: 362 KYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWS 421
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT 433
T+I+ A+ A+ ++++M +KP+ +T I LL AC+ +K + + + +
Sbjct: 422 TMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSK-WAHGVAIR 480
Query: 434 YGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
G + ++ T ++D+ + G++L + + L
Sbjct: 481 QGFASEVTVGTAVVDMYSKCGEILASRRAFDQLAL 515
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 190/384 (49%), Gaps = 18/384 (4%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C+ ++ + G +H V+ G D+ V N ++++Y+KC A KVF+E+S+R
Sbjct: 255 SVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQR 314
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
N VSW++M+SG + A S M + +E + + C + IH
Sbjct: 315 NNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIH 374
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
++ G + V ++LI Y K A V+ ++VS++ +I+GF +P+
Sbjct: 375 CVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPD 434
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ V++ M R + P+ + LE CSV+ +L++ H + ++ S VG ++
Sbjct: 435 EAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVV 494
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+YSK I + +AF + K++++W+ IAA + L++F EM HG++P+
Sbjct: 495 DMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKR-HGLKPNP 553
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG------NALVNMYAKCGLISCS 357
T S+LAAC+ V+ G + ++ Q++G+ + +V+M + G + +
Sbjct: 554 VTTLSVLAACSHGGLVEEGLSLFKSMV-----QELGLEPGFEHYSCMVDMLGRAGKLDTA 608
Query: 358 YKLFNEMLH--RNVVS-WNTIIAA 378
++ M H +N S W ++++A
Sbjct: 609 IEVIKAMPHNLKNGASIWGSLLSA 632
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I +LL CS T L++ H ++ G +V V V+++Y+KCG+++ +R+ FD++
Sbjct: 454 TIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQL 513
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
+ +N+V+WSAMI+ + G AL F++M L PN S ++AC+
Sbjct: 514 ALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACS 564
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 121/276 (43%), Gaps = 39/276 (14%)
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFT-FASILAACAGLASV 319
++ L +W I S +++ +S + E+ G++ D + F IL A + L S
Sbjct: 6 IVSGSKLPNWILRIKESSANGKWQEVVSHYHEIKK-AGIQTVDVSVFPPILKAWSFL-SH 63
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH-RNVVSWNTIIAA 378
+HGK +HA LI+ + +GN+++ Y +CG + +FN M R+ VSWN +I
Sbjct: 64 RHGKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHG 123
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN-----------HAGLVKEG---- 423
H ++ + L F + G +P+ T + ++ AC H L+K G
Sbjct: 124 HLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAI 183
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRA---------GKLLEAEEYT------KKFPL 468
+ NS+ Y + D+E L D + G L+ EE +K L
Sbjct: 184 SSVQNSLLSMY-VDADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVL 242
Query: 469 --GQDP--IVLGTLLSACRLRRDVVIGERLAKQLFH 500
G +P +V+ ++L AC RDV G + + H
Sbjct: 243 VPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIH 278
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 196/577 (33%), Positives = 315/577 (54%), Gaps = 4/577 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + +L C+ L G LH + G++ D V+N +L +Y+KC + ARK+FD +
Sbjct: 161 TFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTL 220
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ +LVSW+ +ISG+ Q G A F M + P+ FAS + + SL +
Sbjct: 221 PQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCK 280
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+IH Y ++ F+ ++LI +Y K A ++ + V +I+G+V N
Sbjct: 281 EIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNG 340
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ ++ E F+ ++++ + P +F+ + L G LH +K KL+ VG+
Sbjct: 341 KNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGS 400
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
I+ +Y+K + A + F I EKD I WN+ I +CS + +++F++M + G R
Sbjct: 401 AILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGME-GTR 459
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D + + L+ACA L ++ +GK+IH +I+ L D+ ++L++MYAKCG ++ S ++
Sbjct: 460 YDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRV 519
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+ M +N VSWN+II+A+ NH L LF +M GI+PD VTF+G+++AC HAG V
Sbjct: 520 FDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQV 579
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG Y++ M + YGI +EH+ C+ D+ GRAG+L EA E P D V GTLL
Sbjct: 580 DEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLG 639
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC + +V + E +K LF L P + YVLL+N+ A G W V R ++K+ G++K
Sbjct: 640 ACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKV 699
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
P YS IEV F A+ SH +I +L +L L
Sbjct: 700 PGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLL 736
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 235/448 (52%), Gaps = 5/448 (1%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C K+++ G +H V MG++ DV V + ++ LYA+ G + A+ +FD + +++ V W
Sbjct: 68 CCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLW 127
Query: 72 SAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
+ M++G+ + G+ A++ F +M + PN FA +S CA L G Q+H ++
Sbjct: 128 NVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVG 187
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
G S V N+L++MY K A ++ + +LVS+N +I+G+V+N + +
Sbjct: 188 CGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHL 247
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
F+ M+ G+ PD +FA L + L+ +H ++ + + F+ + ++ +Y K
Sbjct: 248 FRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFK 307
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
+ A+K D + T I+ ++ L F+ + + ++P TF+S
Sbjct: 308 CRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQER-MKPTSVTFSS 366
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
I A AGLA++ GK++H +I+ +L++ VG+A+++MYAKCG + + ++FN + ++
Sbjct: 367 IFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKD 426
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
+ WN++I + + + G A+ LF QM G + D V+ G L+AC + + G+
Sbjct: 427 AICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHG 486
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKL 456
M K + D+ + LID+ + G L
Sbjct: 487 LMIKG-PLRSDLYAESSLIDMYAKCGNL 513
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 216/440 (49%), Gaps = 6/440 (1%)
Query: 46 LYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYI 102
+Y + G + A+ +F + +W+ MI G G+ AL F+ +M + P++Y
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
F + AC G++S+ G+ +H G FVG+SLI +Y + G+ SDA ++
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
+ + V +N ++ G+V+N ++F M + P+ +FA L +C+ L G
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
LH + V C LE + V NT++A+YSK + A K F + + DL+SWN I+
Sbjct: 181 LHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGL 240
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
+ +F+ M + G++PD TFAS L L S++H K+IH ++IR + DV + +
Sbjct: 241 MGEAEHLFRGMISA-GIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKS 299
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
AL+++Y KC + + K + + V T+I+ + + AL+ F + +KP
Sbjct: 300 ALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKP 359
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
SVTF + A + G+ S+ KT + + ++D+ + G+L A
Sbjct: 360 TSVTFSSIFPAFAGLAALNLGKELHGSIIKT-KLDEKCHVGSAILDMYAKCGRLDLACRV 418
Query: 463 TKKFPLGQDPIVLGTLLSAC 482
+ +D I +++++C
Sbjct: 419 FNRIT-EKDAICWNSMITSC 437
>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
Length = 696
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 198/564 (35%), Positives = 318/564 (56%), Gaps = 11/564 (1%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G L + LK G+ +V ++ +L++YAKCG++ AR+VFD M ERN VSW+A+I+G+ +
Sbjct: 112 GAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTE 171
Query: 81 AGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
+G+ ALE F +M L P+E FAS ++A G + Q+H +K+G A V
Sbjct: 172 SGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLM-HQLHGKIVKYGSALGLTV 230
Query: 138 GNSLISMYMKVGYSSDALLVY-GEAFEPNLVSFNALIAGFVENQQPEKGFEVF-KLMLRQ 195
N+ I+ Y + G D+ ++ G +L+S+NA++ + N ++ + F ++M
Sbjct: 231 LNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQES 290
Query: 196 GLLPDRFSFAGGLEICSV-SNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN---L 251
G+ PD +SF + CS +D +G ++H L +K LE V N ++A+Y+++N +
Sbjct: 291 GVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCM 350
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ +A K F + KD +SWN+ + S L F+ M +++ VR D++ F++ L
Sbjct: 351 MEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSEN-VRTDEYAFSAALR 409
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
+ + LA +Q GKQIH +I + V ++L+ MY+K G+I + K F E + V
Sbjct: 410 SSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVP 469
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
WN +I +A H + LF +M D +TF+GL+T+C+HAGLV EG N+ME
Sbjct: 470 WNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTME 529
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
YG+ +EH+ C +DL GRAG+L +A++ P D +V TLL ACR+ +V +
Sbjct: 530 TKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELA 589
Query: 492 ERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGT 551
+A LF +P S YVLLS++Y+ GMW D A ++++K GL K P +S IEV+
Sbjct: 590 SDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSWIEVKNE 649
Query: 552 FEKFTVAEFSHSKIGEINYMLKTL 575
F + SH K+ EI ML+ L
Sbjct: 650 VHSFNAEDKSHPKMDEIYEMLRVL 673
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 197/394 (50%), Gaps = 11/394 (2%)
Query: 41 NHVLNLYAKCGK--MILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH--- 95
N +L Y++ + AR+VFDE+ R+ VSW+A+++ +G H A MH
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQG 88
Query: 96 LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL 155
L N + SA+ + A + G Q+ + +LK G A+ F ++L+ +Y K G DA
Sbjct: 89 LASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDAR 148
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN 215
V+ E N VS+NALIAG+ E+ E+F M R+GL PD +FA L +
Sbjct: 149 QVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPS 208
Query: 216 DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE-KDLISWNTFI 274
LH VK V N + YS+ + ++ + F I + +DLISWN +
Sbjct: 209 CFLMHQ-LHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAML 267
Query: 275 AACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQH-GKQIHAHLIRMR 333
A +H ++ + F M + GV PD ++F SI+++C+ H G+ IH +I+
Sbjct: 268 GAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSA 327
Query: 334 LNQDVGVGNALVNMYAKCG---LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALK 390
L V NAL+ MY + ++ +YK FN ++ ++ VSWN+++ ++ H L ALK
Sbjct: 328 LEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALK 387
Query: 391 LFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
F M + ++ D F L + + +++ G+
Sbjct: 388 FFRCMCSENVRTDEYAFSAALRSSSELAVLQLGK 421
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 15/213 (7%)
Query: 225 CLTVKCKLESNPFVGNTIMALYSKFNLIG--EAEKAFRLIEEKDLISWNTFIAACSHCAD 282
C + P+ N ++ YS+ + G A + F + +D +SWN +AA +
Sbjct: 16 CFPKSGSCATTPW--NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGA 73
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
+ + + + M + G+ + F S L + A G Q+ + ++ L +V +
Sbjct: 74 HPEAWRLLRAM-HAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAAS 132
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
AL+++YAKCG + + ++F+ M RN VSWN +IA + SAL+LF +M+ G+ P
Sbjct: 133 ALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAP 192
Query: 403 DSVTFIGLLTACN----------HAGLVKEGEA 425
D TF LLTA H +VK G A
Sbjct: 193 DEATFASLLTAVEGPSCFLMHQLHGKIVKYGSA 225
>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 696
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 198/564 (35%), Positives = 318/564 (56%), Gaps = 11/564 (1%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G L + LK G+ +V ++ +L++YAKCG++ AR+VFD M ERN VSW+A+I+G+ +
Sbjct: 112 GAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTE 171
Query: 81 AGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
+G+ ALE F +M L P+E FAS ++A G + Q+H +K+G A V
Sbjct: 172 SGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLM-HQLHGKIVKYGSALGLTV 230
Query: 138 GNSLISMYMKVGYSSDALLVY-GEAFEPNLVSFNALIAGFVENQQPEKGFEVF-KLMLRQ 195
N+ I+ Y + G D+ ++ G +L+S+NA++ + N ++ + F ++M
Sbjct: 231 LNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQES 290
Query: 196 GLLPDRFSFAGGLEICSV-SNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN---L 251
G+ PD +SF + CS +D +G ++H L +K LE V N ++A+Y+++N +
Sbjct: 291 GVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCM 350
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ +A K F + KD +SWN+ + S L F+ M +++ VR D++ F++ L
Sbjct: 351 MEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSEN-VRTDEYAFSAALR 409
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
+ + LA +Q GKQIH +I + V ++L+ MY+K G+I + K F E + V
Sbjct: 410 SSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVP 469
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
WN +I +A H + LF +M D +TF+GL+T+C+HAGLV EG N+ME
Sbjct: 470 WNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTME 529
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
YG+ +EH+ C +DL GRAG+L +A++ P D +V TLL ACR+ +V +
Sbjct: 530 TKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELA 589
Query: 492 ERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGT 551
+A LF +P S YVLLS++Y+ GMW D A ++++K GL K P +S IEV+
Sbjct: 590 SDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSWIEVKNE 649
Query: 552 FEKFTVAEFSHSKIGEINYMLKTL 575
F + SH K+ EI ML+ L
Sbjct: 650 VHSFNAEDKSHPKMDEIYEMLRVL 673
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 205/410 (50%), Gaps = 12/410 (2%)
Query: 25 HAAVLKMGIQPDVIVSNHVLNLYAKCGK--MILARKVFDEMSERNLVSWSAMISGHHQAG 82
HA++LK G+ N +L Y++ + AR+VFDE+ R+ VSW+A+++ +G
Sbjct: 14 HASLLKSGVAAPTPW-NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASG 72
Query: 83 EHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
H A MH L N + SA+ + A + G Q+ + +LK G A+ F +
Sbjct: 73 AHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAAS 132
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
+L+ +Y K G DA V+ E N VS+NALIAG+ E+ E+F M R+GL P
Sbjct: 133 ALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAP 192
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
D +FA L + LH VK V N + YS+ + ++ + F
Sbjct: 193 DEATFASLLTAVEGPSCFLMHQ-LHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIF 251
Query: 260 RLIEE-KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
I + +DLISWN + A +H ++ + F M + GV PD ++F SI+++C+
Sbjct: 252 DGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGH 311
Query: 319 VQH-GKQIHAHLIRMRLNQDVGVGNALVNMYAKCG---LISCSYKLFNEMLHRNVVSWNT 374
H G+ IH +I+ L V NAL+ MY + ++ +YK FN ++ ++ VSWN+
Sbjct: 312 DDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNS 371
Query: 375 IIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
++ ++ H L ALK F M + ++ D F L + + +++ G+
Sbjct: 372 MLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGK 421
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 13/202 (6%)
Query: 236 PFVGNTIMALYSKFNLIG--EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
P N ++ YS+ + G A + F + +D +SWN +AA + + + + + M
Sbjct: 25 PTPWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAM 84
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
+ G+ + F S L + A G Q+ + ++ L +V +AL+++YAKCG
Sbjct: 85 -HAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGR 143
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ + ++F+ M RN VSWN +IA + SAL+LF +M+ G+ PD TF LLTA
Sbjct: 144 VRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTA 203
Query: 414 CN----------HAGLVKEGEA 425
H +VK G A
Sbjct: 204 VEGPSCFLMHQLHGKIVKYGSA 225
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 207/590 (35%), Positives = 316/590 (53%), Gaps = 32/590 (5%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+S+L C+ L+ G LHA LK D IV L++YAKC M A+ +FD
Sbjct: 285 ASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSEN 344
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
N S++AMI+G+ Q AL F ++ L +E + ACA ++ L +G QI
Sbjct: 345 LNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQI 404
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
+ ++K + V N+ I MY K ++A V+ E + VS+NA+IA ++Q
Sbjct: 405 YGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA---HEQN 461
Query: 183 EKGFE---VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
KG+E +F MLR + PD F+F L+ C+ L GM +H VK + SN VG
Sbjct: 462 GKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKSGMASNSSVG 520
Query: 240 NTIMALYSKFNLIGEAEKAF-RLIEEKDL-------------------ISWNTFIAACSH 279
+++ +YSK +I EAEK R + ++ +SWN+ I+
Sbjct: 521 CSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVM 580
Query: 280 CADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG 339
E +F M + G+ PD FT+A++L CA LAS GKQIHA +I+ L DV
Sbjct: 581 KEQSEDAQMLFTRMM-EMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVY 639
Query: 340 VGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG 399
+ + LV+MY+KCG + S +F + L R+ V+WN +I +A+H G A++LFE+M
Sbjct: 640 ICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILEN 699
Query: 400 IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
IKP+ VTFI +L AC H GL+ +G YF M++ YG+ P + H++ ++D+LG++GK+ A
Sbjct: 700 IKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRA 759
Query: 460 EEYTKKFPLGQDPIVLGTLLSACRL-RRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYAS 518
E ++ P D ++ TLL C + R +V + E L L P +S Y LLSN+YA
Sbjct: 760 LELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYAD 819
Query: 519 DGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
GMW V+ R+ ++ LKKEP S +E++ F V + +H + EI
Sbjct: 820 AGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEI 869
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 141/481 (29%), Positives = 244/481 (50%), Gaps = 32/481 (6%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
++ + +L CS + G+ +H V+++G DV+ ++ +L++YAK + + + +VF
Sbjct: 180 GRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQ 239
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVK 118
+ E+N VSWSA+I+G Q LAL+FF +M + ++ I+AS + +CA + L
Sbjct: 240 GIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRL 299
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G Q+HA++LK +A+ V + + MY K DA +++ + N S+NA+I G+ +
Sbjct: 300 GGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQ 359
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ K +F ++ GL D S +G C++ L +G+ ++ L +K L + V
Sbjct: 360 EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCV 419
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N + +Y K + EA + F + +D +SWN IAA + L +F M
Sbjct: 420 ANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSR- 478
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS- 357
+ PD+FTF SIL AC G S+ +G +IH+ +++ + + VG +L++MY+KCG+I +
Sbjct: 479 IEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAE 537
Query: 358 -------------------YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
K+ N+ L VSWN+II+ + A LF +M
Sbjct: 538 KIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEM 597
Query: 399 GIKPDSVTFIGLLTACNH---AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGK 455
GI PD T+ +L C + AGL K+ A E + D+ + L+D+ + G
Sbjct: 598 GITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE----LQSDVYICSTLVDMYSKCGD 653
Query: 456 L 456
L
Sbjct: 654 L 654
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 142/497 (28%), Positives = 235/497 (47%), Gaps = 37/497 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S + C+K AL+ G HA ++ G +P V N +L +Y + A VFD+M
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 64 SERNLVSWSAMI-------------------------------SGHHQAGEHLLALEFFS 92
R++VSW+ MI SG+ Q GE L ++E F
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Query: 93 QMHLLPNEY---IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
M E+ FA + C+ ++ G QIH ++ G + ++L+ MY K
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 229
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
++L V+ E N VS++A+IAG V+N + FK M + + +A L
Sbjct: 230 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLR 289
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
C+ ++LR G LH +K ++ V + +Y+K + + +A+ F E + S
Sbjct: 290 SCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQS 349
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
+N I S K L +F + + G+ D+ + + + ACA + + G QI+
Sbjct: 350 YNAMITGYSQEEHGFKALLLFHRLMSS-GLGFDEISLSGVFRACALVKGLSEGLQIYGLA 408
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
I+ L+ DV V NA ++MY KC ++ ++++F+EM R+ VSWN IIAAH + G L
Sbjct: 409 IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETL 468
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
LF M + I+PD TF +L AC G + G +S+ K+ G++ + LID+
Sbjct: 469 FLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKS-GMASNSSVGCSLIDM 526
Query: 450 LGRAGKLLEAEEYTKKF 466
+ G + EAE+ +F
Sbjct: 527 YSKCGMIEEAEKIHSRF 543
>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 188/569 (33%), Positives = 314/569 (55%), Gaps = 13/569 (2%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C+ AL+ G +H+ ++ G D + + ++ +Y++CG + A++VFD M ++V +
Sbjct: 124 CADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGY 183
Query: 72 SAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
+++IS + GE LA E QM L PNE+ + ++AC V GQQIH Y +K
Sbjct: 184 TSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACP----RVLGQQIHGYLIK 239
Query: 129 -FGYASIS-FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
G S S + +LI Y + G A V+ N+VS+ +++ ++ + + E+
Sbjct: 240 KIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEAL 299
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
+VF M+ +G+ P+ F+ + L C + G LHC +K L ++ V N ++++Y
Sbjct: 300 QVFGDMISEGVDPNEFALSIVLGACG---SIGLGRQLHCSAIKHDLITDIRVSNALLSMY 356
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
+ L+ E E IE DL+SW T I+A EK +++ +M ++ G P+ + F
Sbjct: 357 GRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSE-GFTPNGYAF 415
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
+S+L++CA +AS+ G Q H +++ + ++ GNAL+NMY+KCG + + F+ M
Sbjct: 416 SSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHT 475
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
+V SWN++I HA H AL++F +M++ GIKPD TF+G+L CNH+G+V+EGE +
Sbjct: 476 HDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELF 535
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRR 486
F M Y +P H+ C+ID+LGR G+ EA P D ++ TLL++C+L R
Sbjct: 536 FRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHR 595
Query: 487 DVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMI 546
++ IG+ A +L L ++ YVL+SN+YA G W D R+ + ++G+KK+ S I
Sbjct: 596 NLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWI 655
Query: 547 EVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
E+ F + SH I ML L
Sbjct: 656 EINNEVHTFASRDMSHPNSDSIYQMLGEL 684
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 220/427 (51%), Gaps = 14/427 (3%)
Query: 35 PDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM 94
PDV++ LN K G++ A +FD M +N+V+W++++SG+ + G AL F+ M
Sbjct: 46 PDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADM 105
Query: 95 ---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
+ PN++ +A+ ACA + +L G+Q+H+ +++ G+A +++G+ LI MY + G
Sbjct: 106 VESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSL 165
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
A V+ P++V + +LI+ F N + E E ML+QGL P+ + L C
Sbjct: 166 PAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTAC 225
Query: 212 SVSNDLRKGMILHC-LTVKCKLESNPFVGNT-IMALYSKFNLIGEAEKAFRLIEEKDLIS 269
G +H L K L S +T ++ YS+ A+ F + K+++S
Sbjct: 226 PRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVS 281
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
W + + E+ L VF +M ++ GV P++F + +L AC S+ G+Q+H
Sbjct: 282 WCSMMQLYIRDGRLEEALQVFGDMISE-GVDPNEFALSIVLGAC---GSIGLGRQLHCSA 337
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
I+ L D+ V NAL++MY + GL+ + N++ + ++VSW T I+A+ + G A+
Sbjct: 338 IKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAI 397
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
L QM + G P+ F +L++C + +G F+ + G +I LI++
Sbjct: 398 ALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQG-MQFHCLALKLGCDSEICTGNALINM 456
Query: 450 LGRAGKL 456
+ G++
Sbjct: 457 YSKCGQM 463
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 92/180 (51%), Gaps = 13/180 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+L C+ +L QG+ H LK+G ++ N ++N+Y+KCG+M AR FD M
Sbjct: 414 AFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVM 473
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
++ SW+++I GH Q G+ ALE FS+M + P++ F + C + +G+
Sbjct: 474 HTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGE 533
Query: 121 -----QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIA 174
I YS F A + +I M + G +AL ++ FEP+ + + L+A
Sbjct: 534 LFFRLMIDQYS--FTPAPSHYA--CMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLA 589
>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 188/569 (33%), Positives = 314/569 (55%), Gaps = 13/569 (2%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C+ AL+ G +H+ ++ G D + + ++ +Y++CG + A++VFD M ++V +
Sbjct: 51 CADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGY 110
Query: 72 SAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
+++IS + GE LA E QM L PNE+ + ++AC V GQQIH Y +K
Sbjct: 111 TSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACP----RVLGQQIHGYLIK 166
Query: 129 -FGYASIS-FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
G S S + +LI Y + G A V+ N+VS+ +++ ++ + + E+
Sbjct: 167 KIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEAL 226
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
+VF M+ +G+ P+ F+ + L C + G LHC +K L ++ V N ++++Y
Sbjct: 227 QVFGDMISEGVDPNEFALSIVLGACG---SIGLGRQLHCSAIKHDLITDIRVSNALLSMY 283
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
+ L+ E E IE DL+SW T I+A EK +++ +M ++ G P+ + F
Sbjct: 284 GRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSE-GFTPNGYAF 342
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
+S+L++CA +AS+ G Q H +++ + ++ GNAL+NMY+KCG + + F+ M
Sbjct: 343 SSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHT 402
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
+V SWN++I HA H AL++F +M++ GIKPD TF+G+L CNH+G+V+EGE +
Sbjct: 403 HDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELF 462
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRR 486
F M Y +P H+ C+ID+LGR G+ EA P D ++ TLL++C+L R
Sbjct: 463 FRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHR 522
Query: 487 DVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMI 546
++ IG+ A +L L ++ YVL+SN+YA G W D R+ + ++G+KK+ S I
Sbjct: 523 NLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWI 582
Query: 547 EVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
E+ F + SH I ML L
Sbjct: 583 EINNEVHTFASRDMSHPNSDSIYQMLGEL 611
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 205/399 (51%), Gaps = 14/399 (3%)
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
M +N+V+W++++SG+ + G AL F+ M + PN++ +A+ ACA + +L G
Sbjct: 1 MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+H+ +++ G+A +++G+ LI MY + G A V+ P++V + +LI+ F N
Sbjct: 61 EQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRN 120
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHC-LTVKCKLESNPFV 238
+ E E ML+QGL P+ + L C G +H L K L S
Sbjct: 121 GEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVY 176
Query: 239 GNT-IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+T ++ YS+ A+ F + K+++SW + + E+ L VF +M ++
Sbjct: 177 SSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISE- 235
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
GV P++F + +L AC S+ G+Q+H I+ L D+ V NAL++MY + GL+
Sbjct: 236 GVDPNEFALSIVLGAC---GSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEEL 292
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+ N++ + ++VSW T I+A+ + G A+ L QM + G P+ F +L++C
Sbjct: 293 EAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADV 352
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+ +G F+ + G +I LI++ + G++
Sbjct: 353 ASLDQG-MQFHCLALKLGCDSEICTGNALINMYSKCGQM 390
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 92/180 (51%), Gaps = 13/180 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+L C+ +L QG+ H LK+G ++ N ++N+Y+KCG+M AR FD M
Sbjct: 341 AFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVM 400
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
++ SW+++I GH Q G+ ALE FS+M + P++ F + C + +G+
Sbjct: 401 HTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGE 460
Query: 121 -----QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIA 174
I YS F A + +I M + G +AL ++ FEP+ + + L+A
Sbjct: 461 LFFRLMIDQYS--FTPAPSHYA--CMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLA 516
>gi|118488304|gb|ABK95971.1| unknown [Populus trichocarpa]
Length = 749
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 188/574 (32%), Positives = 319/574 (55%), Gaps = 8/574 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
++ C G+ LH ++K G V N +L++Y M AR++FDEM E++
Sbjct: 155 VIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVD-ADMECARELFDEMHEKD 213
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLLP----NEYIFASAISACAGIQSLVKGQQIH 123
+++WS MI G+ Q E + L+ F +M L+P + + S + ACA + + G+ +H
Sbjct: 214 VIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVH 273
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ G+ FV NSLI MY K + A V+ E + N VS+N++++GFV N+
Sbjct: 274 GLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYS 333
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ + M ++ + D + L+IC +HC+ ++ E+N V + ++
Sbjct: 334 EAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIHCVMIRRGSEANELVLSALI 393
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
Y+K LI A + F + +D++SW+T I+ +HC ++ ++V++EM D V+P+
Sbjct: 394 DAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDL-VKPNV 452
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T ++L AC+ A ++ K H IR +V VG A+V+MY+KCG I S + F++
Sbjct: 453 ITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQ 512
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
+ +N+V+W+ +IAA+ + L AL LF +MK G+KP+ VT + +L AC+H GLV+EG
Sbjct: 513 LALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEG 572
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP--LGQDPIVLGTLLSA 481
+ F SM + G+ P EH++C++D+LGRAGKL A E K P L + G+LLSA
Sbjct: 573 LSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMPDNLKNGASIWGSLLSA 632
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
CR +G+ ++ L+P+ ++ Y++ S++YA+DG+W D A R + K+ G+K
Sbjct: 633 CRSYGLTELGKEAISRVLELEPSNSAGYLVASSMYAADGLWDDAARIRVLAKEKGVKVVA 692
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
YS++ + +F + SH + EI M + L
Sbjct: 693 GYSLVHIDNKACRFVAGDGSHPRSDEIFSMAQQL 726
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 237/455 (52%), Gaps = 8/455 (1%)
Query: 19 QQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE-RNLVSWSAMISG 77
+ G SLHA ++K G + N ++ Y +CG +A VF+ M R+ VSW+ +I G
Sbjct: 64 RHGKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHG 123
Query: 78 HHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
H G + L +F+ + PN I AC + + G +H Y +K G+ +I
Sbjct: 124 HLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAI 183
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVF-KLML 193
S V NSL+SMY+ A ++ E E ++++++ +I G+++ ++P+ G ++F K++L
Sbjct: 184 SSVQNSLLSMYVDADMEC-ARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVL 242
Query: 194 RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
G+ PD L+ C+ S D+ G ++H L + + + FV N+++ +YSK G
Sbjct: 243 VPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAG 302
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
A K F I +++ +SWN+ ++ +Y + S+ M + V D+ T +IL C
Sbjct: 303 SAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKER-VETDEVTLVNILQIC 361
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
H K IH +IR + V +AL++ YAKC LI ++++F M R+VVSW+
Sbjct: 362 KYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWS 421
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT 433
T+I+ A+ A+ ++++M +KP+ +T I LL AC+ +K + + + +
Sbjct: 422 TMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSK-WAHGVAIR 480
Query: 434 YGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
G + ++ T ++D+ + G++L + + L
Sbjct: 481 QGFASEVTVGTAVVDMYSKCGEILASRRAFDQLAL 515
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 187/384 (48%), Gaps = 18/384 (4%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C+ ++ + G +H V+ G D+ V N ++++Y+KC A KVF+E+S+R
Sbjct: 255 SVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQR 314
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
N VSW++M+SG + A S M + +E + + C + IH
Sbjct: 315 NNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIH 374
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
++ G + V ++LI Y K A V+ ++VS++ +I+GF +P+
Sbjct: 375 CVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPD 434
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ V++ M R + P+ + LE CSV+ +L++ H + ++ S VG ++
Sbjct: 435 EAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVV 494
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+YSK I + +AF + K++++W+ IAA + L++F EM HG++P+
Sbjct: 495 DMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKR-HGLKPNP 553
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG------NALVNMYAKCGLISCS 357
T S+LAAC+ V+ G + ++ Q++G+ + +V+M + G + +
Sbjct: 554 VTTLSVLAACSHGGLVEEGLSLFKSMV-----QELGLEPGFEHYSCMVDMLGRAGKLDTA 608
Query: 358 YKLFNEM---LHRNVVSWNTIIAA 378
++ M L W ++++A
Sbjct: 609 IEVIKAMPDNLKNGASIWGSLLSA 632
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I +LL CS T L++ H ++ G +V V V+++Y+KCG+++ +R+ FD++
Sbjct: 454 TIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQL 513
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
+ +N+V+WSAMI+ + G AL F++M L PN S ++AC+
Sbjct: 514 ALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACS 564
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 121/276 (43%), Gaps = 39/276 (14%)
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFT-FASILAACAGLASV 319
++ L +W I S +++ +S + E+ G++ D + F IL A + L S
Sbjct: 6 IVSGSKLPNWILRIKESSANGKWQEVVSHYHEIKK-AGIQTVDVSVFPPILKAWSFL-SH 63
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH-RNVVSWNTIIAA 378
+HGK +HA LI+ + +GN+++ Y +CG + +FN M R+ VSWN +I
Sbjct: 64 RHGKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHG 123
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN-----------HAGLVKEG---- 423
H ++ + L F + G +P+ T + ++ AC H L+K G
Sbjct: 124 HLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAI 183
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRA---------GKLLEAEEYT------KKFPL 468
+ NS+ Y + D+E L D + G L+ EE +K L
Sbjct: 184 SSVQNSLLSMY-VDADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVL 242
Query: 469 --GQDP--IVLGTLLSACRLRRDVVIGERLAKQLFH 500
G +P +V+ ++L AC RDV G + + H
Sbjct: 243 VPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIH 278
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 197/564 (34%), Positives = 302/564 (53%), Gaps = 4/564 (0%)
Query: 17 ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMIS 76
+L G +H V KMG + DV V+ +++LY++ G + +A KVF +M +++ SW+AMIS
Sbjct: 136 SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMIS 195
Query: 77 GHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYAS 133
G Q G AL ++M + + AS + CA ++ G IH + LK G S
Sbjct: 196 GFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDS 255
Query: 134 ISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLML 193
FV N+LI+MY K G DA +V+ + +LVS+N++IA + +N P FK M
Sbjct: 256 DVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQ 315
Query: 194 RQGLLPDRFSFAGGLEICSVSNDLR-KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI 252
G+ PD + I S +D R IL + + L+ + +GN ++ +Y+K +
Sbjct: 316 LGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYM 375
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
A F + KD ISWNT + + + + + M P+ T+ SI+ A
Sbjct: 376 NCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPA 435
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
+ + ++Q G +IHA LI+ L DV V L+++Y KCG + + LF E+ V W
Sbjct: 436 YSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPW 495
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
N IIA+ H G AL+LF+ M A +K D +TF+ LL+AC+H+GLV EG+ F+ M+K
Sbjct: 496 NAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQK 555
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGE 492
YGI P ++H+ C++DLLGRAG L +A E + P+ D + G LLSAC++ + +G
Sbjct: 556 EYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGT 615
Query: 493 RLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTF 552
+ +L + YVLLSN+YA+ W V R + +D GL+K P +S + V
Sbjct: 616 LASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKA 675
Query: 553 EKFTVAEFSHSKIGEINYMLKTLS 576
E F +H K EI LK LS
Sbjct: 676 EVFYTGNQTHPKYTEIYKELKVLS 699
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 143/471 (30%), Positives = 256/471 (54%), Gaps = 17/471 (3%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
++L + C A ++ LHA +L G ++++S ++NLY G + L+R FD + +
Sbjct: 26 NALFNSCVNVNATKK---LHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHK 82
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM-------HLLPNEYIFASAISACAGIQSLVK 118
+N+ SW+++IS + + G++ A+ +Q+ HL P+ Y F + AC SLV
Sbjct: 83 KNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACV---SLVD 139
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+++H K G+ FV SL+ +Y + G A V+ + ++ S+NA+I+GF +
Sbjct: 140 GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQ 199
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N V M +G+ D + A L +C+ S+D+ G+++H +K L+S+ FV
Sbjct: 200 NGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFV 259
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N ++ +YSKF + +A+ F +E +DL+SWN+ IAA D L FK M G
Sbjct: 260 SNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLG-G 318
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCS 357
+RPD T S+ + + L+ + + I +IR L++DV +GNALVNMYAK G ++C+
Sbjct: 319 IRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCA 378
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTACNH 416
+ +F+++ ++ +SWNT++ + + L A+ + M + P+ T++ ++ A +H
Sbjct: 379 HTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSH 438
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
G +++G + K + D+ TCLIDL G+ G+L +A + P
Sbjct: 439 VGALQQGMKIHAKLIKN-SLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIP 488
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 200/397 (50%), Gaps = 21/397 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++S+L C+++ + G+ +H VLK G+ DV VSN ++N+Y+K G++ A+ VFD+M
Sbjct: 224 TVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQM 283
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
R+LVSW+++I+ + Q + AL FF M L P+ S S + + +
Sbjct: 284 EVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISR 343
Query: 121 QIHAYSLKFGYASISFV-GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
I + ++ + V GN+L++MY K+GY + A V+ + + +S+N L+ G+ +N
Sbjct: 344 SILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQN 403
Query: 180 QQPEKGFEVFKLMLR-QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ + + +M + +P++ ++ + S L++GM +H +K L + FV
Sbjct: 404 GLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFV 463
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++ LY K + +A F I + WN IA+ E+ L +FK+M +
Sbjct: 464 ATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAER- 522
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNAL------VNMYAKCG 352
V+ D TF S+L+AC+ V G++ + ++ G+ +L V++ + G
Sbjct: 523 VKADHITFVSLLSACSHSGLVDEGQKCFD-----IMQKEYGIKPSLKHYGCMVDLLGRAG 577
Query: 353 LISCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLG 385
+ +Y+L M + + W +++A + N LG
Sbjct: 578 YLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELG 614
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 191/555 (34%), Positives = 312/555 (56%), Gaps = 7/555 (1%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C++ ++ G+ H LK+G+ ++ V++ +L++Y+KCG + AR +FD +E+N++SW
Sbjct: 309 CARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFD-TNEKNVISW 367
Query: 72 SAMISGHHQAGEHLLALEFFSQMHLLP----NEYIFASAISACAGIQSLVKGQQIHAYSL 127
++MI G+ + + A E +M + NE + + C +K ++IH Y+L
Sbjct: 368 NSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYAL 427
Query: 128 KFGY-ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
+ G+ S V N+ ++ Y K G A V+ + S+NALI G V+N P K
Sbjct: 428 RHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKAL 487
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
+++ LM GL PD F+ A L C+ L G +H ++ E + F+ ++++LY
Sbjct: 488 DLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLY 547
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
+ I A+ F +EEK+L+ WNT I S L +F +M + + PD+ +
Sbjct: 548 VQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSK-IWPDEISI 606
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
L AC+ +++++ GK++H ++ L + V +L++MYAKCG + S +F+ +
Sbjct: 607 IGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHL 666
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
+ V+WN +I + H G A++LF+ M+ G +PDSVTFI LLTACNHAGLV EG Y
Sbjct: 667 KGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEY 726
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRR 486
M+ +GI P +EH+ C++D+LGRAG+L EA E + P D + +LLS+CR R
Sbjct: 727 LGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYR 786
Query: 487 DVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMI 546
D+ IGE++A +L L P YVL+SN YA G W +V R+ +K+ GL+K+ S I
Sbjct: 787 DLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWI 846
Query: 547 EVQGTFEKFTVAEFS 561
E+ G +F V + S
Sbjct: 847 EIGGKVSRFLVGDES 861
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 135/466 (28%), Positives = 235/466 (50%), Gaps = 14/466 (3%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAV-LKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
I LL C + K ++ G +H + Q DV++ ++ +Y+ C + VF+
Sbjct: 96 IGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNAS 155
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKG 119
+NL W+A++SG+ + A+ F +M +P+ + I AC G+ + G
Sbjct: 156 RRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLG 215
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ +H ++LK S FVGN+LI+MY K G+ A+ V+ + + NLVS+N+++ +EN
Sbjct: 216 EAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLEN 275
Query: 180 QQPEKGFEVFKLMLR--QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
E+ + +FK +L +GL+PD + + +C+ ++R GM+ H L +K L
Sbjct: 276 GVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELK 335
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V ++++ +YSK + EA F EK++ISWN+ I S D+ + ++M +
Sbjct: 336 VNSSLLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMED 394
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ-DVGVGNALVNMYAKCGLISC 356
V+ ++ T ++L C K+IH + +R Q D V NA V YAKCG +
Sbjct: 395 KVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHY 454
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ +F M + V SWN +I H + AL L+ M+ +G++PD T LL+AC
Sbjct: 455 AEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACAR 514
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTC--LIDLLGRAGKLLEAE 460
+ G+ SM + +++ F C L+ L + GK+L A+
Sbjct: 515 LKSLSCGKEIHGSMLRN---GFELDEFICISLVSLYVQCGKILLAK 557
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 132/467 (28%), Positives = 231/467 (49%), Gaps = 16/467 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++ C ++ G ++H LK + DV V N ++ +Y K G + A KVFD+M
Sbjct: 198 TLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKM 257
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM-----HLLPNEYIFASAISACAGIQSLVK 118
+RNLVSW++++ + G + F + L+P+ + I CA +
Sbjct: 258 PQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRL 317
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G H +LK G V +SL+ MY K GY +A +++ + E N++S+N++I G+ +
Sbjct: 318 GMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLF-DTNEKNVISWNSMIGGYSK 376
Query: 179 NQQPEKGFEVF-KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK-LESNP 236
++ FE+ K+ + + + + L +C K +H ++ ++S+
Sbjct: 377 DRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDE 436
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
V N +A Y+K + AE F +E K + SWN I K L ++ M
Sbjct: 437 LVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGS 496
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
G+ PD FT AS+L+ACA L S+ GK+IH ++R D + +LV++Y +CG I
Sbjct: 497 -GLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILL 555
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ F+ M +N+V WNT+I + + AL +F QM ++ I PD ++ IG L AC+
Sbjct: 556 AKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQ 615
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEH--FTC-LIDLLGRAGKLLEAE 460
++ G+ K++ EH TC LID+ + G + +++
Sbjct: 616 VSALRLGKELHCFAVKSHL----TEHSFVTCSLIDMYAKCGCMEQSQ 658
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 193/410 (47%), Gaps = 34/410 (8%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I+SLL C++ K+L G +H ++L+ G + D + +++LY +CGK++LA+ FD M
Sbjct: 504 TIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNM 563
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
E+NLV W+ MI+G Q AL+ F QM + P+E A+ AC+ + +L G+
Sbjct: 564 EEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGK 623
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H +++K SFV SLI MY K G + ++ V++N LI G+ +
Sbjct: 624 ELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHG 683
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-----ILHCLTVKCKLESN 235
K E+FK M G PD +F L C+ + + +G+ + +K KLE
Sbjct: 684 HGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHY 743
Query: 236 PFVGNTIMALYSKFNLIGEA-EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
++ + + + EA E L ++ D W++ +++C + D + G V ++
Sbjct: 744 A----CVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLL 799
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
+ +++ S A L +++ + + L +D G
Sbjct: 800 ELGPDKAENYVLISNFY--ARLGKWDEVRKMRQRMKEIGLQKDAG--------------- 842
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDS 404
CS+ + R +V +++ + ++ + ++L +++ G KPD+
Sbjct: 843 -CSWIEIGGKVSRFLVGDESLLQS---MKIQQTWIELEKKINKIGYKPDT 888
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 194/607 (31%), Positives = 309/607 (50%), Gaps = 68/607 (11%)
Query: 23 SLHAAVLKMGIQ-PDVIVSNHVLNLYAKCGKMILARKVFDEMS----------------- 64
++H +LK +Q P + NH+L YAK G++ AR+VFDEM
Sbjct: 33 AVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHS 92
Query: 65 --------------ERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASA 106
ER+ VS++A+I+G G +++ + + + P ++
Sbjct: 93 RLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAM 152
Query: 107 ISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNL 166
I + + G +H L+ G+ + +FVG+ L+ MY K+G DA V+ E +
Sbjct: 153 IMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTV 212
Query: 167 VSFNALIAGFVENQQPE-------------------------------KGFEVFKLMLRQ 195
V +N LI G + + E + +VF+ M +
Sbjct: 213 VMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAE 272
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
G+ D+++F L C +G +H + E N FVG+ ++ +YSK I A
Sbjct: 273 GVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLA 332
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
E FR + +++ISW I A E+ + F EM D G++PDDFT S++++CA
Sbjct: 333 EAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMD-GIKPDDFTLGSVISSCAN 391
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
LAS++ G Q H + L + + V NALV +Y KCG I +++LF+EM + VSW +
Sbjct: 392 LASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTAL 451
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYG 435
+ +A + LFE+M G+KPD VTFIG+L+AC+ AGLV++G YF+SM+K +
Sbjct: 452 VTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHD 511
Query: 436 ISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLA 495
I P +H+TC+IDL R+G+ EAEE+ K+ P D TLLS+CRLR ++ IG+ A
Sbjct: 512 IVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAA 571
Query: 496 KQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKF 555
+ L P + YVLL +++A+ G W +VA R+ ++D +KKEP S I+ + F
Sbjct: 572 ENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIF 631
Query: 556 TVAEFSH 562
+ + SH
Sbjct: 632 SADDQSH 638
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 186/397 (46%), Gaps = 43/397 (10%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS---------------- 64
G S+H VL++G V + ++++YAK G + AR+VF EM
Sbjct: 165 GHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLR 224
Query: 65 ---------------ERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASA 106
+R+ ++W+ M++G Q G L AL+ F +M + ++Y F S
Sbjct: 225 CKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSI 284
Query: 107 ISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNL 166
++AC + + +G+QIHAY + Y FVG++L+ MY K A V+ N+
Sbjct: 285 LTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNI 344
Query: 167 VSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCL 226
+S+ A+I G+ +N E+ F M G+ PD F+ + C+ L +G HCL
Sbjct: 345 ISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCL 404
Query: 227 TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKG 286
+ L V N ++ LY K I +A + F + D +SW + + ++
Sbjct: 405 ALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKET 464
Query: 287 LSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN---- 342
+ +F++M + G++PD TF +L+AC+ V+ G + M+ + D+ +
Sbjct: 465 IDLFEKMLVN-GLKPDGVTFIGVLSACSRAGLVEKGCD---YFDSMQKDHDIVPIDDHYT 520
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHR-NVVSWNTIIAA 378
++++Y++ G + + +M H + W T++++
Sbjct: 521 CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSS 557
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 148/292 (50%), Gaps = 13/292 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S+L C A ++G +HA + + + +V V + ++++Y+KC + LA VF M
Sbjct: 280 TFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+ RN++SW+AMI G+ Q A+ FS+M + P+++ S IS+CA + SL +G
Sbjct: 340 TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGA 399
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q H +L G V N+L+++Y K G DA ++ E + VS+ AL+ G+ +
Sbjct: 400 QFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFG 459
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG- 239
+ ++ ++F+ ML GL PD +F G L CS + + KG C + + V
Sbjct: 460 KAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKG----CDYFDSMQKDHDIVPI 515
Query: 240 ----NTIMALYSKFNLIGEAEKAFR-LIEEKDLISWNTFIAACSHCADYEKG 286
++ LYS+ EAE+ + + D W T +++C + E G
Sbjct: 516 DDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIG 567
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 193/574 (33%), Positives = 329/574 (57%), Gaps = 7/574 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
SSL+ + TK+L ++H V+K G + + +++ Y KCG + ARK+FDE+
Sbjct: 5 SSLIAQSAHTKSLTTLRAVHTNVIKSGFSYSFL-GHKLIDGYIKCGSLAEARKLFDELPS 63
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQI 122
R++V+W++MIS H G+ A+EF+ M + LP+ Y F++ A + + + GQ+
Sbjct: 64 RHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRA 123
Query: 123 HAYSLKFGYASIS-FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
H ++ G + FV ++L+ MY K DA LV+ E ++V F ALI G+ ++
Sbjct: 124 HGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGL 183
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ ++F+ M+ +G+ P+ ++ A L C DL G ++H L VK LES +
Sbjct: 184 DGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTS 243
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +YS+ N+I ++ K F ++ + ++W +F+ E +S+F+EM + P
Sbjct: 244 LLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIR-CSISP 302
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
+ FT +SIL AC+ LA ++ G+QIHA +++ L+ + G AL+N+Y KCG + + +F
Sbjct: 303 NPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVF 362
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ + +VV+ N++I A+A + G AL+LFE++K G+ P+ VTFI +L ACN+AGLV+
Sbjct: 363 DVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVE 422
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
EG F S+ + I I+HFTC+IDLLGR+ +L EA ++ D ++ TLL++
Sbjct: 423 EGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR-NPDVVLWRTLLNS 481
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
C++ +V + E++ ++ L P ++LL+NLYAS G W V + ++D LKK P
Sbjct: 482 CKIHGEVEMAEKVMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLKKSP 541
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ S ++V F + SH + EI ML L
Sbjct: 542 AMSWVDVDREVHTFMAGDLSHPRSLEIFEMLHGL 575
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 142/283 (50%), Gaps = 14/283 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++ +L +C L G +H V+K G++ V +L +Y++C + + KVF+++
Sbjct: 205 TLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQL 264
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
N V+W++ + G Q G +A+ F +M + PN + +S + AC+ + L G+
Sbjct: 265 DYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGE 324
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIHA ++K G + G +LI++Y K G A V+ E ++V+ N++I + +N
Sbjct: 325 QIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNG 384
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ E+F+ + GL+P+ +F L C+ G++ + + +N +
Sbjct: 385 FGHEALELFERLKNMGLVPNGVTFISILLACN-----NAGLVEEGCQIFASIRNNHNIEL 439
Query: 241 TIMALYSKFNLIGEA---EKAFRLIEE---KDLISWNTFIAAC 277
TI +L+G + E+A LIEE D++ W T + +C
Sbjct: 440 TIDHFTCMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLLNSC 482
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 197/564 (34%), Positives = 302/564 (53%), Gaps = 4/564 (0%)
Query: 17 ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMIS 76
+L G +H V KMG + DV V+ +++LY++ G + +A KVF +M +++ SW+AMIS
Sbjct: 136 SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMIS 195
Query: 77 GHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYAS 133
G Q G AL ++M + + AS + CA ++ G IH + LK G S
Sbjct: 196 GFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDS 255
Query: 134 ISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLML 193
FV N+LI+MY K G DA +V+ + +LVS+N++IA + +N P FK M
Sbjct: 256 DVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQ 315
Query: 194 RQGLLPDRFSFAGGLEICSVSNDLR-KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI 252
G+ PD + I S +D R IL + + L+ + +GN ++ +Y+K +
Sbjct: 316 LGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYM 375
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
A F + KD ISWNT + + + + + M P+ T+ SI+ A
Sbjct: 376 NCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPA 435
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
+ + ++Q G +IHA LI+ L DV V L+++Y KCG + + LF E+ V W
Sbjct: 436 YSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPW 495
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
N IIA+ H G AL+LF+ M A +K D +TF+ LL+AC+H+GLV EG+ F+ M+K
Sbjct: 496 NAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQK 555
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGE 492
YGI P ++H+ C++DLLGRAG L +A E + P+ D + G LLSAC++ + +G
Sbjct: 556 EYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGT 615
Query: 493 RLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTF 552
+ +L + YVLLSN+YA+ W V R + +D GL+K P +S + V
Sbjct: 616 LASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKA 675
Query: 553 EKFTVAEFSHSKIGEINYMLKTLS 576
E F +H K EI LK LS
Sbjct: 676 EVFYTGNQTHPKYTEIYKELKVLS 699
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 143/471 (30%), Positives = 256/471 (54%), Gaps = 17/471 (3%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
++L + C A ++ LHA +L G ++++S ++NLY G + L+R FD + +
Sbjct: 26 NALFNSCVNVNATKK---LHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHK 82
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM-------HLLPNEYIFASAISACAGIQSLVK 118
+N+ SW+++IS + + G++ A+ +Q+ HL P+ Y F + AC SLV
Sbjct: 83 KNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACV---SLVD 139
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+++H K G+ FV SL+ +Y + G A V+ + ++ S+NA+I+GF +
Sbjct: 140 GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQ 199
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N V M +G+ D + A L +C+ S+D+ G+++H +K L+S+ FV
Sbjct: 200 NGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFV 259
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N ++ +YSKF + +A+ F +E +DL+SWN+ IAA D L FK M G
Sbjct: 260 SNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLG-G 318
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCS 357
+RPD T S+ + + L+ + + I +IR L++DV +GNALVNMYAK G ++C+
Sbjct: 319 IRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCA 378
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTACNH 416
+ +F+++ ++ +SWNT++ + + L A+ + M + P+ T++ ++ A +H
Sbjct: 379 HTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSH 438
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
G +++G + K + D+ TCLIDL G+ G+L +A + P
Sbjct: 439 VGALQQGMKIHAKLIKN-SLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIP 488
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 201/400 (50%), Gaps = 21/400 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++S+L C+++ + G+ +H VLK G+ DV VSN ++N+Y+K G++ A+ VFD+M
Sbjct: 224 TVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQM 283
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
R+LVSW+++I+ + Q + AL FF M L P+ S S + + +
Sbjct: 284 EVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISR 343
Query: 121 QIHAYSLKFGYASISFV-GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
I + ++ + V GN+L++MY K+GY + A V+ + + +S+N L+ G+ +N
Sbjct: 344 SILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQN 403
Query: 180 QQPEKGFEVFKLMLR-QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ + + +M + +P++ ++ + S L++GM +H +K L + FV
Sbjct: 404 GLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFV 463
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++ LY K + +A F I + WN IA+ E+ L +FK+M +
Sbjct: 464 ATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAER- 522
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNAL------VNMYAKCG 352
V+ D TF S+L+AC+ V G++ + ++ G+ +L V++ + G
Sbjct: 523 VKADHITFVSLLSACSHSGLVDEGQKCFD-----IMQKEYGIKPSLKHYGCMVDLLGRAG 577
Query: 353 LISCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSA 388
+ +Y+L M + + W +++A + N LG A
Sbjct: 578 YLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLA 617
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 192/573 (33%), Positives = 319/573 (55%), Gaps = 8/573 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE-- 65
LL++ +K K+L+ +H+ ++ + N +L LYAKCG + +F+
Sbjct: 103 LLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPS 162
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
N+V+W+ +I+ ++ + AL FF++M + PN + F++ + ACA L +GQQI
Sbjct: 163 TNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQI 222
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
HA K + + FV +L+ MY K G A V+ E NLVS+N++I GFV+N+
Sbjct: 223 HALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLY 282
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
+ VF+ +L G PD+ S + L C+ +L G +H VK L +V N++
Sbjct: 283 GRAIGVFREVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSL 340
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y K L +A K F ++D+++WN I C C ++E+ + F+ M + GV PD
Sbjct: 341 VDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIRE-GVEPD 399
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+ +++S+ A A +A++ G IH+H+++ ++ + ++LV MY KCG + +Y++F
Sbjct: 400 EASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFR 459
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
E NVV W +I H A+KLFE+M G+ P+ +TF+ +L+AC+H G + +
Sbjct: 460 ETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDD 519
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G YFNSM + I P +EH+ C++DLLGR G+L EA + + P D +V G LL AC
Sbjct: 520 GFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGAC 579
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
+V +G +A++LF L+P Y+LLSN+Y GM + R+++ +G++KE
Sbjct: 580 GKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESG 639
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S I+V+ F + SHS+ EI ML+ L
Sbjct: 640 CSWIDVKNRTFVFNANDRSHSRTQEIYGMLQKL 672
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 129/468 (27%), Positives = 224/468 (47%), Gaps = 49/468 (10%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S++L C+ L +G +HA + K D V+ +L++YAKCG M+LA VFDEM
Sbjct: 202 TFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEM 261
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQ-MHLLPNEYIFASAISACAGIQSLVKGQQI 122
RNLVSW++MI G + + A+ F + + L P++ +S +SACAG+ L G+Q+
Sbjct: 262 PHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLGPDQVSISSVLSACAGLVELDFGKQV 321
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H +K G + +V NSL+ MY K G DA ++ + ++V++N +I G +
Sbjct: 322 HGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNF 381
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E+ F+ M+R+G+ PD S++ + L +G ++H +K N + +++
Sbjct: 382 EQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSL 441
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y K + +A + FR +E +++ W I + + +F+EM N+ GV P+
Sbjct: 442 VTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNE-GVVPE 500
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMY-AKCGL--ISCSYK 359
TF S+L+AC+ + G + N++ N++ K GL +C
Sbjct: 501 YITFVSVLSACSHTGKIDDGFKYF---------------NSMANVHNIKPGLEHYACMVD 545
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGG--SALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
L R+G A + E M +PDS+ + LL AC
Sbjct: 546 LLG--------------------RVGRLEEACRFIESMP---FEPDSLVWGALLGACGKH 582
Query: 418 GLVKEGEAYFNSMEKTYGISPDIE-HFTCLIDLLGRAGKLLEAEEYTK 464
V+ G E+ + + PD ++ L ++ R G L EA+E +
Sbjct: 583 ANVEMGREV---AERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRR 627
>gi|78499697|gb|ABB45851.1| hypothetical protein [Eutrema halophilum]
Length = 697
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 195/573 (34%), Positives = 313/573 (54%), Gaps = 5/573 (0%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+S L C ++ + G SLHA K + V V + +L++Y + GK+ + +VF EM
Sbjct: 99 LSVALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVFAEMP 158
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQ 120
RN V+W+A I+G AG H L +FSQM L + + FA A+ ACA ++ + G+
Sbjct: 159 FRNSVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGR 218
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+IH + + G+A+I +V NSL +MY + G D L ++ E ++V + +LI ++
Sbjct: 219 EIHTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDVVLWTSLITAYIRIG 278
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
Q EK F LM + P+ +FA C+ + L G LH L + V N
Sbjct: 279 QEEKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVSN 338
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++M +YS + A F+ + +D+ISW+T I S A E+ F M G +
Sbjct: 339 SMMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFGEECFKYFSWM-RQAGPQ 397
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P DF AS+L+ +A ++ G+Q+HA + + L Q+ + +AL+NMY+KCG I + K+
Sbjct: 398 PTDFALASLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIRSALINMYSKCGSIIEASKV 457
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F E ++VS +I +A H A+ LFE+ +PD VTFI +LTAC+H+G +
Sbjct: 458 FEEKDRTDIVSLTAMINGYAEHGKCEEAIDLFEKSLKLSFRPDDVTFISVLTACSHSGQL 517
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
G YFN M++ Y + P EH+ C++DLL RAG+L +AE+ + P +D +V TLL
Sbjct: 518 DLGFQYFNLMQENYNMRPAKEHYGCMVDLLCRAGRLNDAEKMINEMPWKKDDVVWTTLLR 577
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC+ + DV G R A+++ L PT+ + V L+N+++S G W + A RK +K G+ KE
Sbjct: 578 ACKEKGDVERGRRAAQRILELDPTSFTTLVTLANIHSSTGNWKEAANVRKDMKSKGVIKE 637
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLK 573
P +S I ++ F SH + ++ +L+
Sbjct: 638 PGWSSILIKDQVSAFASGSLSHPQSEDVCSILE 670
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 220/436 (50%), Gaps = 19/436 (4%)
Query: 40 SNHV-----LNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM 94
SNHV L GK+ +AR+VFD+M R++ SW+A++ G+ A + AL FS M
Sbjct: 26 SNHVDTHSQLQDLIDSGKLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPEEALILFSAM 85
Query: 95 HLLP-----NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
+ P + Y+ + A+ AC ++ G+ +HAY+ K S FVG++L+ MYM++G
Sbjct: 86 RVDPLGVSGDTYVLSVALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIG 145
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR-QGLLPDRFSFAGGL 208
+ V+ E N V++ A I G V +G F M R + L D F+FA L
Sbjct: 146 KIDKSCRVFAEMPFRNSVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIAL 205
Query: 209 EICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIE---EK 265
+ C+ ++ G +H + + +V N++ +Y++ GE + RL E E+
Sbjct: 206 KACADLRQVKYGREIHTHVIVKGFAAILWVANSLATMYTE---CGEMQDGLRLFESMSER 262
Query: 266 DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
D++ W + I A EK ++ F M N V P++ TFAS AACA L+ + G+Q+
Sbjct: 263 DVVLWTSLITAYIRIGQEEKAVNTFLLMRNSQ-VSPNEQTFASTFAACASLSRLVWGEQL 321
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
H ++ + L + V N+++ MY+ C + + LF M R+++SW+TII ++ G
Sbjct: 322 HGNVFSLGLGDSLSVSNSMMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFG 381
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
K F M+ G +P LL+ ++++G +++ G+ + +
Sbjct: 382 EECFKYFSWMRQAGPQPTDFALASLLSVSGIMAVLEQGRQ-VHALALYLGLEQNPTIRSA 440
Query: 446 LIDLLGRAGKLLEAEE 461
LI++ + G ++EA +
Sbjct: 441 LINMYSKCGSIIEASK 456
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 138/289 (47%), Gaps = 5/289 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++ +S C+ L G LH V +G+ + VSN ++ +Y+ C K+ A +F
Sbjct: 300 QTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVSNSMMKMYSTCAKLDSASVLFQG 359
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKG 119
M R+++SWS +I G+ QA ++FS M P ++ AS +S + L +G
Sbjct: 360 MRCRDIISWSTIIGGYSQAAFGEECFKYFSWMRQAGPQPTDFALASLLSVSGIMAVLEQG 419
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+HA +L G + ++LI+MY K G +A V+ E ++VS A+I G+ E+
Sbjct: 420 RQVHALALYLGLEQNPTIRSALINMYSKCGSIIEASKVFEEKDRTDIVSLTAMINGYAEH 479
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFV 238
+ E+ ++F+ L+ PD +F L CS S L G + + +
Sbjct: 480 GKCEEAIDLFEKSLKLSFRPDDVTFISVLTACSHSGQLDLGFQYFNLMQENYNMRPAKEH 539
Query: 239 GNTIMALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAACSHCADYEKG 286
++ L + + +AEK + +KD + W T + AC D E+G
Sbjct: 540 YGCMVDLLCRAGRLNDAEKMINEMPWKKDDVVWTTLLRACKEKGDVERG 588
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 207/590 (35%), Positives = 316/590 (53%), Gaps = 32/590 (5%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+S+L C+ L+ G LHA LK D IV L++YAKC M A+ +FD
Sbjct: 243 ASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSEN 302
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
N S++AMI+G+ Q AL F ++ L +E + ACA ++ L +G QI
Sbjct: 303 LNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQI 362
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
+ ++K + V N+ I MY K ++A V+ E + VS+NA+IA ++Q
Sbjct: 363 YGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA---HEQN 419
Query: 183 EKGFE---VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
KG+E +F MLR + PD F+F L+ C+ L GM +H VK + SN VG
Sbjct: 420 GKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKSGMASNSSVG 478
Query: 240 NTIMALYSKFNLIGEAEKAF-RLIEEKDL-------------------ISWNTFIAACSH 279
+++ +YSK +I EAEK R + ++ +SWN+ I+
Sbjct: 479 CSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVM 538
Query: 280 CADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG 339
E +F M + G+ PD FT+A++L CA LAS GKQIHA +I+ L DV
Sbjct: 539 KEQSEDAQMLFTRMM-EMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVY 597
Query: 340 VGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG 399
+ + LV+MY+KCG + S +F + L R+ V+WN +I +A+H G A++LFE+M
Sbjct: 598 ICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILEN 657
Query: 400 IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
IKP+ VTFI +L AC H GL+ +G YF M++ YG+ P + H++ ++D+LG++GK+ A
Sbjct: 658 IKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRA 717
Query: 460 EEYTKKFPLGQDPIVLGTLLSACRL-RRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYAS 518
E ++ P D ++ TLL C + R +V + E L L P +S Y LLSN+YA
Sbjct: 718 LELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYAD 777
Query: 519 DGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
GMW V+ R+ ++ LKKEP S +E++ F V + +H + EI
Sbjct: 778 AGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEI 827
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 141/481 (29%), Positives = 244/481 (50%), Gaps = 32/481 (6%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
++ + +L CS + G+ +H V+++G DV+ ++ +L++YAK + + + +VF
Sbjct: 138 GRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQ 197
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVK 118
+ E+N VSWSA+I+G Q LAL+FF +M + ++ I+AS + +CA + L
Sbjct: 198 GIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRL 257
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G Q+HA++LK +A+ V + + MY K DA +++ + N S+NA+I G+ +
Sbjct: 258 GGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQ 317
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ K +F ++ GL D S +G C++ L +G+ ++ L +K L + V
Sbjct: 318 EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCV 377
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N + +Y K + EA + F + +D +SWN IAA + L +F M
Sbjct: 378 ANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSR- 436
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS- 357
+ PD+FTF SIL AC G S+ +G +IH+ +++ + + VG +L++MY+KCG+I +
Sbjct: 437 IEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAE 495
Query: 358 -------------------YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
K+ N+ L VSWN+II+ + A LF +M
Sbjct: 496 KIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEM 555
Query: 399 GIKPDSVTFIGLLTACNH---AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGK 455
GI PD T+ +L C + AGL K+ A E + D+ + L+D+ + G
Sbjct: 556 GITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE----LQSDVYICSTLVDMYSKCGD 611
Query: 456 L 456
L
Sbjct: 612 L 612
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 147/505 (29%), Positives = 240/505 (47%), Gaps = 43/505 (8%)
Query: 1 MAKSISSLLH-----HCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMIL 55
MA+S+ LLH C+K AL+ G HA ++ G +P V N +L +Y +
Sbjct: 1 MAESLR-LLHMTRSVECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVS 59
Query: 56 ARKVFDEMSERNLVSWSAMI-------------------------------SGHHQAGEH 84
A VFD+M R++VSW+ MI SG+ Q GE
Sbjct: 60 ASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGES 119
Query: 85 LLALEFFSQMHLLPNEY---IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSL 141
L ++E F M E+ FA + C+ ++ G QIH ++ G + ++L
Sbjct: 120 LKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASAL 179
Query: 142 ISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDR 201
+ MY K ++L V+ E N VS++A+IAG V+N + FK M + +
Sbjct: 180 LDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQ 239
Query: 202 FSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRL 261
+A L C+ ++LR G LH +K ++ V + +Y+K + + +A+ F
Sbjct: 240 SIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN 299
Query: 262 IEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQH 321
E + S+N I S K L +F + + G+ D+ + + + ACA + +
Sbjct: 300 SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSS-GLGFDEISLSGVFRACALVKGLSE 358
Query: 322 GKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN 381
G QI+ I+ L+ DV V NA ++MY KC ++ ++++F+EM R+ VSWN IIAAH
Sbjct: 359 GLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQ 418
Query: 382 HRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIE 441
+ G L LF M + I+PD TF +L AC G + G +S+ K+ G++ +
Sbjct: 419 NGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKS-GMASNSS 476
Query: 442 HFTCLIDLLGRAGKLLEAEEYTKKF 466
LID+ + G + EAE+ +F
Sbjct: 477 VGCSLIDMYSKCGMIEEAEKIHSRF 501
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 194/553 (35%), Positives = 298/553 (53%), Gaps = 45/553 (8%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAG 112
A +F+ + E NL+ W+ M GH + + AL+ + M LLPN Y F + +CA
Sbjct: 18 AISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAK 77
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMK------------------------- 147
++L++GQQIH + LK GY +V SLISMY +
Sbjct: 78 SKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTAL 137
Query: 148 ------VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDR 201
GY ++A ++ E ++VS+NA+I+G+VE ++ E++K M++ + PD
Sbjct: 138 ITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDE 197
Query: 202 FSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRL 261
+ + C+ S + G LH SN + N ++ LYSK + A F+
Sbjct: 198 STMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQG 257
Query: 262 IEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQH 321
+ +KD+ISWNT I +H Y++ L +F+EM G P+D T S+L ACA L ++
Sbjct: 258 LAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRS-GESPNDVTMLSVLPACAHLGAIDI 316
Query: 322 GKQIHAHLIRMRLNQDVGVGNA------LVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
G+ IH + I RL GV NA L++MYAKCG I + ++F+ ML R++ SWN +
Sbjct: 317 GRWIHVY-INKRLK---GVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAM 372
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYG 435
I A H +A LF +M+ GI PD +TF+GLL+AC+H+G++ G F SM + Y
Sbjct: 373 IFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYK 432
Query: 436 ISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLA 495
I+P +EH+ C+IDLLG G EA+E + P+ D ++ +LL AC++ +V +GE A
Sbjct: 433 ITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYA 492
Query: 496 KQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKF 555
+ L ++P YVLLSN+YA+ G W VA R +L D G+KK P S IE+ +F
Sbjct: 493 QNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEF 552
Query: 556 TVAEFSHSKIGEI 568
+ + H + EI
Sbjct: 553 IIGDKFHPRNREI 565
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 122/490 (24%), Positives = 219/490 (44%), Gaps = 84/490 (17%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMIL------------ 55
LL C+K+KAL +G +H VLK+G D+ V+ ++++YA+ G++
Sbjct: 71 LLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRH 130
Query: 56 -------------------ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM-- 94
ARK+FDE+S +++VSW+AMISG+ + ALE + M
Sbjct: 131 VVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMK 190
Query: 95 -HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSD 153
++ P+E + +SACA S+ G+Q+H++ G+ S + N LI +Y K G
Sbjct: 191 TNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVET 250
Query: 154 ALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSV 213
A ++ + +++S+N LI G ++ +F+ MLR G P+ + L C+
Sbjct: 251 ACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAH 310
Query: 214 SNDLRKGMILHC-LTVKCKLESN-PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
+ G +H + + K +N + +++ +Y+K I A++ F + + L SWN
Sbjct: 311 LGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWN 370
Query: 272 TFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
I + +F +M + G+ PDD TF +L+AC+ + G+ H+ R
Sbjct: 371 AMIFGFAMHGKANAAFDLFSKMRKN-GIDPDDITFVGLLSACSHSGMLDLGR----HIFR 425
Query: 332 MRLNQDVGVGNAL------VNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
++QD + L +++ CGL +K EM+
Sbjct: 426 -SMSQDYKITPKLEHYGCMIDLLGHCGL----FKEAKEMI-------------------- 460
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
+ ++PD V + LL AC V+ GE+Y ++ K +P +
Sbjct: 461 ----------RTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPG--SYVL 508
Query: 446 LIDLLGRAGK 455
L ++ AG+
Sbjct: 509 LSNIYATAGR 518
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 154/319 (48%), Gaps = 7/319 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ +++ C+++ +++ G LH+ + G ++ + N +++LY+KCG++ A +F +
Sbjct: 199 TMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGL 258
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
++++++SW+ +I GH + AL F +M PN+ S + ACA + ++ G+
Sbjct: 259 AKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGR 318
Query: 121 QIHAYSLKF--GYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
IH Y K G + S + SLI MY K G A V+ +L S+NA+I GF
Sbjct: 319 WIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAM 378
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPF 237
+ + F++F M + G+ PD +F G L CS S L G I ++ K+
Sbjct: 379 HGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLE 438
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
++ L L EA++ R + E D + W + + AC + E G S + +
Sbjct: 439 HYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKI 498
Query: 297 HGVRPDDFTFASILAACAG 315
P + S + A AG
Sbjct: 499 EPENPGSYVLLSNIYATAG 517
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 120/246 (48%), Gaps = 33/246 (13%)
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
L F+ + A F I+E +L+ WNT + +D L ++ M + G+ P+ +
Sbjct: 8 LSPHFDGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMIS-LGLLPNSY 66
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
+F +L +CA ++ G+QIH H++++ + D+ V +L++MYA+ G + ++K+F+
Sbjct: 67 SFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRS 126
Query: 365 LHR-------------------------------NVVSWNTIIAAHANHRLGGSALKLFE 393
HR +VVSWN +I+ + AL+L++
Sbjct: 127 SHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYK 186
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 453
M T +KPD T + +++AC +G ++ G + +E +G +I+ LIDL +
Sbjct: 187 DMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIED-HGFGSNIKIVNVLIDLYSKC 245
Query: 454 GKLLEA 459
G++ A
Sbjct: 246 GEVETA 251
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 196/566 (34%), Positives = 308/566 (54%), Gaps = 49/566 (8%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACA 111
A VF+ + E NL+ W+ M+ GH + + + ALE + +M HL PN Y F + +CA
Sbjct: 17 AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHL-PNSYSFPFLLKSCA 75
Query: 112 GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMK------------------------ 147
++ +G+QIHA LK G +V SLISMY +
Sbjct: 76 KSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTA 135
Query: 148 --VGYSS-----DALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
GY+S A V+ E E ++VS+NA+I G+VEN + E+ E+FK M+R + PD
Sbjct: 136 LITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPD 195
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCK----LESNPFVGNTIMALYSKFNLIGEAE 256
+ + C+ S + G +H S+ + N ++ LYSK G+ E
Sbjct: 196 EGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSK---CGDVE 252
Query: 257 KAFRLIEE---KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
AF L E KD++SWNT I +H Y++ L +F+EM G P+D T S+L AC
Sbjct: 253 TAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRS-GECPNDVTLLSVLPAC 311
Query: 314 AGLASVQHGKQIHAHLIRMR--LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
A L ++ G+ IH ++ + + + + +L++MYAKCG I ++++FN ML+R++ S
Sbjct: 312 AHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSS 371
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
WN +I A H +A LF +M+ ++PD +TF+GLL+AC+H+GL+ G F SM
Sbjct: 372 WNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMT 431
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
+ Y ++P +EH+ C+IDLLG +G EAEE P+ D ++ +LL AC+ ++ +
Sbjct: 432 QDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELA 491
Query: 492 ERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGT 551
E A++L ++P + YVLLSN+YA+ G W DVA R +L G+KK P S IEV
Sbjct: 492 ESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSV 551
Query: 552 FEKFTVAEFSHSKIGEINYMLKTLSL 577
+F + + H + EI +ML+ + +
Sbjct: 552 VHEFIIGDKLHPRRREIYHMLEEMDV 577
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 212/477 (44%), Gaps = 79/477 (16%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAK-------------- 49
S LL C+K+KA ++G +HA VLK+G D V ++++YA+
Sbjct: 66 SFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDAS 125
Query: 50 -------CGKMIL----------ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFS 92
C +I ARKVFDE++ER++VSW+AMI+G+ + G + ALE F
Sbjct: 126 SHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFK 185
Query: 93 QM---HLLPNEYIFASAISACAGIQSLVKGQQIHAY----SLKFGYASISFVGNSLISMY 145
+M ++ P+E S +SACA S+ G+Q+H++ G++S + N+LI +Y
Sbjct: 186 EMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLY 245
Query: 146 MKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA 205
K G A ++ ++VS+N LI G+ ++ +F+ MLR G P+ +
Sbjct: 246 SKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLL 305
Query: 206 GGLEICSVSNDLRKGMILHC-LTVKCKLESNPF-VGNTIMALYSKFNLIGEAEKAFRLIE 263
L C+ + G +H + K K +N + +++ +Y+K I A + F +
Sbjct: 306 SVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSML 365
Query: 264 EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGK 323
+ L SWN I + +F M + V PDD TF +L+AC+ + G+
Sbjct: 366 YRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNR-VEPDDITFVGLLSACSHSGLLDLGR 424
Query: 324 QIHAHLIR-MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH 382
QI + + L + ++++ GL +K EM+H
Sbjct: 425 QIFKSMTQDYNLTPKLEHYGCMIDLLGHSGL----FKEAEEMIH---------------- 464
Query: 383 RLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
++PD V + LL AC G ++ E++ +K I P+
Sbjct: 465 --------------TMPMEPDGVIWCSLLKACKKHGNLELAESF---AQKLIKIEPE 504
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 121/245 (49%), Gaps = 35/245 (14%)
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
F+ + A F I+E +L+ WNT + + +D L ++ M + G P+ ++F
Sbjct: 11 FDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVS-LGHLPNSYSFPF 69
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG---------------- 352
+L +CA + + G+QIHA ++++ D V +L++MYA+ G
Sbjct: 70 LLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRD 129
Query: 353 LISCS---------------YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA 397
++SC+ K+F+E+ R+VVSWN +I + + AL+LF++M
Sbjct: 130 VVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMR 189
Query: 398 TGIKPDSVTFIGLLTACNHAGLVKEGE---AYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
T ++PD T + +++AC +G ++ G ++ + + +G S ++ LIDL + G
Sbjct: 190 TNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCG 249
Query: 455 KLLEA 459
+ A
Sbjct: 250 DVETA 254
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 191/556 (34%), Positives = 320/556 (57%), Gaps = 14/556 (2%)
Query: 28 VLKMGIQ-PDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLL 86
V K+G DV V +++++AK G ++ R+VFD + ER +V W+ +I+ + Q+G
Sbjct: 179 VFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDE 238
Query: 87 ALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLIS 143
A+E F M P++Y +S +SAC + S GQQ+H+ +L+ G S S V L+
Sbjct: 239 AVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVD 298
Query: 144 MYMKV--GYS-SDALLVYGEAFEPNLVSFNALIAGFVEN-QQPEKGFEVFKLMLRQGLLP 199
MY K G S +A V+ + N++++ AL++G+V+ Q + +F ML +G+ P
Sbjct: 299 MYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRP 358
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
+ +++ L+ C+ D G +H VK L VGN ++++Y++ I EA AF
Sbjct: 359 NHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAF 418
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+ EK+++S++ + Y+ ++ + G+ FTF S+++A A + +
Sbjct: 419 DQLYEKNMVSFSGNLDGDGRSNTYQD----YQIERMELGIST--FTFGSLISAAASVGML 472
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
G+++HA ++ D +GN+LV+MY++CG + + ++F+EM NV+SW ++I+
Sbjct: 473 TKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGL 532
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
A H AL+LF M A G+KP+ VT+I +L+AC+HAGLVKEG+ +F M+K +G+ P
Sbjct: 533 AKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPR 592
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLF 499
+EH+ C++DLLGR+G + +A ++ + P D +V TLL AC+ ++ IGE A +
Sbjct: 593 MEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVI 652
Query: 500 HLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAE 559
L+P +PYVLLSNLYA G+W VA R +++D L KE S + V T +F +
Sbjct: 653 QLEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGD 712
Query: 560 FSHSKIGEINYMLKTL 575
SH + EI L+TL
Sbjct: 713 TSHPQAEEIYTKLETL 728
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 221/452 (48%), Gaps = 20/452 (4%)
Query: 21 GISLHAAVLKMG--IQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE--RNLVSWSAMIS 76
G +L +L+ G ++ D +V+N +L LY+KC + AR VFD M R+LVSW+AM S
Sbjct: 66 GRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMAS 125
Query: 77 GHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSL-VKGQQIHAYSLKFGYA 132
+ G AL F + LLPN + +A AC + + G + K G+
Sbjct: 126 CLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFW 185
Query: 133 SISF-VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKL 191
VG +LI M+ K G V+ FE +V + LI + ++ ++ E+F
Sbjct: 186 GTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLD 245
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN- 250
ML G PD+++ + L C+ R G LH L ++ LES+ V ++ +Y+K +
Sbjct: 246 MLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHN 305
Query: 251 --LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSV-FKEMSNDHGVRPDDFTFA 307
+ A + F + + ++++W ++ + + + F +M N+ G+RP+ T++
Sbjct: 306 GQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNE-GIRPNHITYS 364
Query: 308 SILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR 367
S+L ACA L G+QIH H ++ L VGNALV+MYA+ G I + F+++ +
Sbjct: 365 SMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEK 424
Query: 368 NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYF 427
N+VS++ + G S Q++ + + TF L++A G++ +G+
Sbjct: 425 NMVSFSGNLDGD-----GRSNTYQDYQIERMELGISTFTFGSLISAAASVGMLTKGQ-RL 478
Query: 428 NSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+++ G D L+ + R G L++A
Sbjct: 479 HALSLKAGFGSDRAIGNSLVSMYSRCGYLVDA 510
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 218/417 (52%), Gaps = 30/417 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKC--GKMIL-ARKVF 60
++SS+L C++ + + G LH+ L++G++ D VS ++++YAK G+ + AR+VF
Sbjct: 257 TLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVF 316
Query: 61 DEMSERNLVSWSAMISGHHQAG-EHLLALEFFSQM---HLLPNEYIFASAISACAGIQSL 116
+ M + N+++W+A++SG+ Q G + + F +M + PN ++S + ACA +
Sbjct: 317 NRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQ 376
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G+QIH + +K A ++ VGN+L+SMY + G +A + + +E N+VSF +G
Sbjct: 377 DSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSF----SGN 432
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
++ ++ +++ R L F+F + + L KG LH L++K S+
Sbjct: 433 LDGDGRSNTYQDYQIE-RMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDR 491
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
+GN+++++YS+ + +A + F + + ++ISW + I+ + + L +F +M
Sbjct: 492 AIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIA- 550
Query: 297 HGVRPDDFTFASILAACAGLASVQHGK------QIHAHLI-RMRLNQDVGVGNALVNMYA 349
GV+P+D T+ ++L+AC+ V+ GK Q H LI RM +V++
Sbjct: 551 AGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYA------CMVDLLG 604
Query: 350 KCGLISCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSALKLFEQMKATGIKP 402
+ GL+ + NEM + + W T++ A H N +G A Q++ P
Sbjct: 605 RSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAP 661
>gi|224098357|ref|XP_002311156.1| predicted protein [Populus trichocarpa]
gi|222850976|gb|EEE88523.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 189/535 (35%), Positives = 299/535 (55%), Gaps = 5/535 (0%)
Query: 16 KALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMI 75
+AL +G +H + GI DV V+ ++ +YA+CG++ A+++F E+ R+LV+WSA+I
Sbjct: 2 RALGRGTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAII 61
Query: 76 SGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYA 132
+ Q+G AL F M L N+ I S++ ACA + SL G+ +H ++K
Sbjct: 62 AAFVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVD 121
Query: 133 SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM 192
VG +L+SMY K G+ + AL ++ ++V++NA+I G+ + +P E+F +
Sbjct: 122 LDISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKL 181
Query: 193 LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI 252
L P+ + G L ++ NDL +G +H +KC ES V ++ +Y+K +
Sbjct: 182 QLSELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSL 241
Query: 253 GEAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
AE F R KD +SWN IA H S F +M ++ ++P+ T ++L
Sbjct: 242 SGAEFLFHRTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLEN-IQPNIVTIVTVLP 300
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
A A L++++ G +HA++IRM VGN L++MYAKCG + S K+F+EM +++ VS
Sbjct: 301 AVAHLSALRAGMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVS 360
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
WN ++A +A H G A++LF +M+ + I+ DS +FI +L+AC HAGL+ EG F+SM
Sbjct: 361 WNVMLAGYAVHGRGSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGLIGEGRKIFDSMS 420
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
K + + PD+EH+ C+ DLLGRAG E + K P+ D V G LL A + +V +
Sbjct: 421 KQHQLEPDLEHYACMADLLGRAGLFNEVLDLIKSMPMEPDAGVWGALLGASTMHSNVQLA 480
Query: 492 ERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMI 546
E L L+ + Y LSN YA G W DV R + +GL+K P YS +
Sbjct: 481 EFALHHLDKLEHKNLTHYAALSNTYARSGRWADVGNTRSKITKTGLRKSPGYSWV 535
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 196/399 (49%), Gaps = 10/399 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S L C++ +L+ G S+H +K + D+ V ++++YAKCG LA +F+ M +
Sbjct: 94 SSLPACAEVSSLKLGKSMHCCAVKANVDLDISVGTALVSMYAKCGFFALALTLFNRMPCK 153
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIH 123
++V+W+AMI+G+ Q GE ALE F ++ L PN + A A + L +G IH
Sbjct: 154 DVVTWNAMINGYAQIGEPFPALEMFHKLQLSELNPNSGTMVGLLPAFALLNDLDQGSCIH 213
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDA-LLVYGEAFEPNLVSFNALIAGFVENQQP 182
+K G+ S V +LI MY K G S A L + + VS+N +IAG++ +
Sbjct: 214 GKIIKCGFESECHVKTALIDMYAKCGSLSGAEFLFHRTGCRKDEVSWNVMIAGYMHSGHA 273
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
F F M + + P+ + L + + LR GM LH ++ +S VGN +
Sbjct: 274 IDAFSAFCQMKLENIQPNIVTIVTVLPAVAHLSALRAGMTLHAYVIRMGFQSKTPVGNCL 333
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y+K + +EK F ++ KD +SWN +A + + +F M D +R D
Sbjct: 334 IDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLAGYAVHGRGSCAIELFSRM-QDSEIRLD 392
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKCGLISCSYKLF 361
F+F ++L+AC + G++I + + +L D+ + ++ + GL + L
Sbjct: 393 SFSFINVLSACRHAGLIGEGRKIFDSMSKQHQLEPDLEHYACMADLLGRAGLFNEVLDLI 452
Query: 362 NEM-LHRNVVSWNTIIAA---HANHRLGGSALKLFEQMK 396
M + + W ++ A H+N +L AL ++++
Sbjct: 453 KSMPMEPDAGVWGALLGASTMHSNVQLAEFALHHLDKLE 491
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 175/355 (49%), Gaps = 13/355 (3%)
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
+++L +G +IH ++ + G S V +++MY + G A ++ E +LV+++A+
Sbjct: 1 MRALGRGTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAI 60
Query: 173 IAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
IA FV++ P++ +F+ M +GL ++ L C+ + L+ G +HC VK +
Sbjct: 61 IAAFVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANV 120
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
+ + VG ++++Y+K A F + KD+++WN I + + L +F +
Sbjct: 121 DLDISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHK 180
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
+ + P+ T +L A A L + G IH +I+ + V AL++MYAKCG
Sbjct: 181 LQLSE-LNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCG 239
Query: 353 LISCSYKLFNEM-LHRNVVSWNTIIAA--HANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
+S + LF+ ++ VSWN +IA H+ H + A F QMK I+P+ VT +
Sbjct: 240 SLSGAEFLFHRTGCRKDEVSWNVMIAGYMHSGHAI--DAFSAFCQMKLENIQPNIVTIVT 297
Query: 410 LLTACNHAGLVKEG---EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+L A H ++ G AY M G CLID+ + G L +E+
Sbjct: 298 VLPAVAHLSALRAGMTLHAYVIRM----GFQSKTPVGNCLIDMYAKCGWLDHSEK 348
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I ++L + AL+ G++LHA V++MG Q V N ++++YAKCG + + K+F EM
Sbjct: 294 TIVTVLPAVAHLSALRAGMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEM 353
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
++ VSW+ M++G+ G A+E FS+M + + + F + +SAC + +G+
Sbjct: 354 KNKDTVSWNVMLAGYAVHGRGSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGLIGEGR 413
Query: 121 QI 122
+I
Sbjct: 414 KI 415
>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
Length = 766
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 189/579 (32%), Positives = 325/579 (56%), Gaps = 6/579 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S + C++ + G +HA LK D+IV N ++ +Y+K G + +F+ +
Sbjct: 154 ALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERI 213
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISACAGIQSLVKG 119
+++L+SW ++I+G Q G + AL+ F +M + PNE+ F SA AC + S G
Sbjct: 214 KDKDLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYG 273
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+QIH S+K+ +VG SL MY + A + + P+LVS+N+++ +
Sbjct: 274 EQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVE 333
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ +F M GL PD + G L C + L G ++H VK L+ + V
Sbjct: 334 GLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVC 393
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N+++++Y++ + + A F I+++D+++WN+ + AC+ E+ L +F + N
Sbjct: 394 NSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFS-LLNKSEP 452
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
D + ++L+A A L + KQ+HA+ + L D + N L++ YAKCG + + +
Sbjct: 453 SLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMR 512
Query: 360 LFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
LF M +R+V SW+++I +A AL LF +M++ GI+P+ VTFIG+LTAC+ G
Sbjct: 513 LFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRVG 572
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
V EG Y++ ME YGI P EH +C++DLL RAGKL EA + + P D I+ TL
Sbjct: 573 FVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTL 632
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L+A ++ D+ +G+R A+ + ++ P+ ++ YVLL N+YA+ G W + A +K ++ SG+K
Sbjct: 633 LAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVK 692
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
K P S ++++G + F V + SH + EI ML+ + +
Sbjct: 693 KSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLELIGM 731
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 150/469 (31%), Positives = 252/469 (53%), Gaps = 21/469 (4%)
Query: 6 SSLLHHCSKTKALQQGISLHA-AVLKMGIQPD------VIVSNHVLNLYAKCGKMILARK 58
++L+ CS+ ++L QG +H V PD ++ NH++ +Y +C AR+
Sbjct: 48 AALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQ 107
Query: 59 VFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQS 115
VFDEM RN VSW+++I+ H Q G AL FS M +++ SA+ AC +
Sbjct: 108 VFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGD 167
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
+ G+Q+HA++LK S V N+L++MY K G D +++ + +L+S+ ++IAG
Sbjct: 168 VGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAG 227
Query: 176 FVENQQPEKGFEVFKLMLRQGL-LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
F + + +VF+ M+ +G P+ F F C G +H L++K +L+
Sbjct: 228 FAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDR 287
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
+ +VG ++ +Y++F + A AF IE DL+SWN+ + A S + L +F EM
Sbjct: 288 DLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM- 346
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
D G+RPD T +L AC G ++ HG+ IH++L+++ L+ DV V N+L++MYA+C +
Sbjct: 347 RDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDL 406
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
S + +F+E+ ++VV+WN+I+ A A H LKLF + + D ++ +L+A
Sbjct: 407 SSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSAS 466
Query: 415 NHAG---LVKEGEAY-FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
G +VK+ AY F + G+ D LID + G L +A
Sbjct: 467 AELGYFEMVKQVHAYAFKA-----GLVDDRMLSNTLIDTYAKCGSLDDA 510
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 200/387 (51%), Gaps = 9/387 (2%)
Query: 103 FASAISACAGIQSLVKGQQIHAY-------SLKFGYASISFVGNSLISMYMKVGYSSDAL 155
+A+ +SAC+ ++SL +G+++H + S A + +GN LI+MY + A
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN 215
V+ E N VS+ ++IA V+N + +F MLR G D+F+ + C+
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 216 DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIA 275
D+ G +H +K + S+ V N ++ +YSK L+ + F I++KDLISW + IA
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226
Query: 276 ACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN 335
+ + L VF++M + P++F F S AC + S ++G+QIH I+ RL+
Sbjct: 227 GFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 286
Query: 336 QDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM 395
+D+ VG +L +MYA+ + + F + ++VSWN+I+ A++ L AL LF +M
Sbjct: 287 RDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM 346
Query: 396 KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGK 455
+ +G++PD +T GLL AC + G + + K G+ D+ L+ + R
Sbjct: 347 RDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKL-GLDGDVSVCNSLLSMYARCSD 405
Query: 456 LLEAEEYTKKFPLGQDPIVLGTLLSAC 482
L A + + QD + ++L+AC
Sbjct: 406 LSSAMDVFHEIK-DQDVVTWNSILTAC 431
>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 183/570 (32%), Positives = 326/570 (57%), Gaps = 6/570 (1%)
Query: 12 CSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVS 70
C++ AL++G + H+A +++G + +V N +L YAK G + A +VFD M R++V+
Sbjct: 117 CARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVT 176
Query: 71 WSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQQIHAYS 126
W++M+ G+ G LAL+ F +MH + + +A++AC +L++G+++HAY
Sbjct: 177 WNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYV 236
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
++ G VG SL+ MY K G + A ++ +V++N +I G+ N PE+ F
Sbjct: 237 IRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAF 296
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
+ F M +G + + L C+ + G +H + + + + ++ +Y
Sbjct: 297 DCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMY 356
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
SK + +E F + K L+SWN IAA + Y + +++F E+ N + PD FT
Sbjct: 357 SKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLN-QPLYPDYFTM 415
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
++++ A L ++ +Q+H++++R+ ++ V NA+++MYA+CG + S K+F++M
Sbjct: 416 SAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAG 475
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
++V+SWNTII +A H G AL++F +MK+ G++P+ TF+ +LTAC+ +G+ EG
Sbjct: 476 KDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQ 535
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRR 486
FN M++ YGI P IEH+ C+ DLLGRAG L E ++ + P+ + G+LL+A R R
Sbjct: 536 FNLMQRDYGIIPQIEHYGCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTASRNRN 595
Query: 487 DVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMI 546
D+ I E A+++F L+ T YV+LS++YA G W DV R + + GL++ + S++
Sbjct: 596 DIDIAEYAAERIFELEHDNTGCYVILSSMYADAGRWEDVQRIRSSMMEKGLRRTDARSIV 655
Query: 547 EVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
E+ G+ F + +H + I+ + LS
Sbjct: 656 ELHGSSCSFVNGDMTHPQSKTIHEVSDVLS 685
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 162/322 (50%), Gaps = 4/322 (1%)
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
SL+ + G DAL + P+ N +I GF + PE ++ ML G P
Sbjct: 48 SLVLSHAAAGRMHDALAAVRSS--PDAFLHNVVIRGFADAGLPEAALAAYRAMLAAGARP 105
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL-ESNPFVGNTIMALYSKFNLIGEAEKA 258
DRF+F ++ C+ L +G H ++ L S + GN+++A Y+K ++ +AE+
Sbjct: 106 DRFTFPVVVKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERV 165
Query: 259 FRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
F + +D+++WN+ + L F+EM V+ D + LAAC ++
Sbjct: 166 FDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALAACCLDSA 225
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA 378
+ G+++HA++IR L QDV VG +L++MY KCG I+ + +F M R VV+WN +I
Sbjct: 226 LMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGG 285
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISP 438
+A + A F QMKA G + + VT I LL AC G + + ++ + P
Sbjct: 286 YALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFL-P 344
Query: 439 DIEHFTCLIDLLGRAGKLLEAE 460
+ T L+++ + GK+ +E
Sbjct: 345 HVVLETALLEMYSKVGKVKSSE 366
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 160/313 (51%), Gaps = 4/313 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
I + L C AL QG +HA V++ G++ DV V +L++Y KCG + A +F M
Sbjct: 213 IIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMP 272
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAI---SACAGIQSLVKGQQ 121
R +V+W+ MI G+ G A + F QM ++ +AI +ACA +S + G+
Sbjct: 273 SRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRS 332
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H Y + + + +L+ MY KVG + ++G+ LVS+N +IA ++ +
Sbjct: 333 VHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEM 392
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ +F +L Q L PD F+ + + + LR+ +H V+ N V N
Sbjct: 393 YNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNA 452
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+M +Y++ + + K F + KD+ISWNT I + + L +F EM ++ G++P
Sbjct: 453 VMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSN-GLQP 511
Query: 302 DDFTFASILAACA 314
++ TF S+L AC+
Sbjct: 512 NESTFVSVLTACS 524
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 43/96 (44%)
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
N +I A+ L +AL + M A G +PD TF ++ C G ++EG A ++ +
Sbjct: 76 NVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGRAAHSAAIR 135
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
+ ++ L+ + G + +AE P+
Sbjct: 136 LGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPV 171
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 189/581 (32%), Positives = 309/581 (53%), Gaps = 13/581 (2%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD--EMSER 66
L C+ L +G LH +LK + ++N+Y+KC + + +VF+ +
Sbjct: 36 LQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFNFPTHHNK 95
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIH 123
N+ +++A+I+G AL ++QM L P+++ F I AC +IH
Sbjct: 96 NVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFVVTKIH 155
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
K G FVG++L++ Y+K + +A V+ E ++V +NA++ GF + + E
Sbjct: 156 GLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNGFAQIGRFE 215
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ VF+ M G++P R++ G L I SV D G +H K ES V N ++
Sbjct: 216 EALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVVSNALI 275
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y K +G+A F +++E D+ SWN+ ++ C D+ L +F M V+PD
Sbjct: 276 DMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQPDL 335
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQ--------DVGVGNALVNMYAKCGLIS 355
T ++L AC LA++ HG++IH +++ L + DV + NAL++MYAKCG +
Sbjct: 336 VTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKCGNMR 395
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ +F M ++V SWN +I + H GG AL +F +M + P+ ++F+GLL+AC+
Sbjct: 396 DARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEISFVGLLSACS 455
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
HAG+VKEG + + ME YG+SP IEH+TC+ID+L RAG+L+EA + P DP+
Sbjct: 456 HAGMVKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTMPFKADPVGW 515
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
+LL+ACRL D + E A ++ L+P YVL+SN+Y G + +V R +K
Sbjct: 516 RSLLAACRLHNDTDLAEVAASKVIELEPDHCGNYVLMSNVYGVVGRYEEVLEWRYTMKQQ 575
Query: 536 GLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
+KK P S IE+ F + +H + I L +L+
Sbjct: 576 NVKKRPGCSWIELVNGVHVFITGDRTHPQTEYIYAGLNSLT 616
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 181/366 (49%), Gaps = 11/366 (3%)
Query: 105 SAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG--EAF 162
+ + +CA +L KG+++H + LK + SLI+MY K +L V+
Sbjct: 34 ATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFNFPTHH 93
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
N+ ++NALIAGF+ N P++ ++ M G+ PD+F+F + C +D
Sbjct: 94 NKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFVVTK 153
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
+H L K LE + FVG+ ++ Y KF +GEA + F + +D++ WN + +
Sbjct: 154 IHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNGFAQIGR 213
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
+E+ L VF+ M + GV P +T +L+ + + +G+ +H + +M V V N
Sbjct: 214 FEEALGVFRRMGGN-GVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVVSN 272
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG-IK 401
AL++MY KC + + +F M ++ SWN+I++ H L+LF++M + ++
Sbjct: 273 ALIDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQ 332
Query: 402 PDSVTFIGLLTACNHAGLVKEGEAYFNSM-------EKTYGISPDIEHFTCLIDLLGRAG 454
PD VT +L AC H + G M E+++ + D+ L+D+ + G
Sbjct: 333 PDLVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKCG 392
Query: 455 KLLEAE 460
+ +A
Sbjct: 393 NMRDAR 398
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 150/316 (47%), Gaps = 27/316 (8%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++ +L S G ++H V KMG + V+VSN ++++Y KC + A VF+ M
Sbjct: 235 TVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVVSNALIDMYGKCKCVGDALSVFEMM 294
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKG 119
E ++ SW++++S H + G+H L F +M + P+ + + AC + +L+ G
Sbjct: 295 DEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQPDLVTVTTVLPACTHLAALMHG 354
Query: 120 QQIHAYSLKFGYASIS--------FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNA 171
++IH Y + G A + N+L+ MY K G DA +V+ E ++ S+N
Sbjct: 355 REIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKCGNMRDARMVFVNMREKDVASWNI 414
Query: 172 LIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK 231
+I G+ + + ++F M + ++P+ SF G L CS GM+ L +
Sbjct: 415 MITGYGMHGYGGEALDIFSRMCQAQMVPNEISFVGLLSACS-----HAGMVKEGLGFLSE 469
Query: 232 LESNPFVGNTIMALYSKFNLI---GEAEKAFRLIE----EKDLISWNTFIAACSHCADY- 283
+ES V +I +++ G+ +A+ L+ + D + W + +AAC D
Sbjct: 470 MESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTMPFKADPVGWRSLLAACRLHNDTD 529
Query: 284 --EKGLSVFKEMSNDH 297
E S E+ DH
Sbjct: 530 LAEVAASKVIELEPDH 545
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T + L +CA A++ GK++H HL++ +L+NMY+KC LI S ++FN
Sbjct: 31 TCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFNFP 90
Query: 365 LH--RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
H +NV ++N +IA + L AL L+ QM+ GI PD TF ++ AC
Sbjct: 91 THHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRAC 142
>gi|413935694|gb|AFW70245.1| hypothetical protein ZEAMMB73_875976 [Zea mays]
Length = 807
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 206/641 (32%), Positives = 328/641 (51%), Gaps = 78/641 (12%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++S+L C AL G H +K+G+ V N +L +Y KCG + A ++FD M
Sbjct: 144 TLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGM 203
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL-------LPNEYIFASAISACAGIQSL 116
N VS++AM+ G Q G AL F++M + + + ACAG ++
Sbjct: 204 PSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNV 263
Query: 117 VK----GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV--------------- 157
+ Q IHA ++ G+ S VGNSL+ +Y K +A+ V
Sbjct: 264 ARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNIL 323
Query: 158 ---YGE-----------------AFEPNLVSF---------------------------- 169
YG+ FEPN V++
Sbjct: 324 ITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIPKPSV 383
Query: 170 ---NALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCL 226
N L++G+ + + ++ ++F+ M Q + PDR + A L CS + G +H
Sbjct: 384 TTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSA 443
Query: 227 TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKG 286
+V+ L ++ FV + ++ +YSK +G A F ++ E+D++ WN+ I+ + + E+
Sbjct: 444 SVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEA 503
Query: 287 LSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVN 346
K+M ++G+ P + ++AS++ CA L+S+ G+Q+HA +++ +Q+V VG +L++
Sbjct: 504 FDFLKQM-RENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLID 562
Query: 347 MYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVT 406
MYAK G + + FN M+ +N+V+WN +I +A + G A++LFE M T KPDSVT
Sbjct: 563 MYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVT 622
Query: 407 FIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
FI +LT C+H+GLV E +FNSME YGI+P +EH+TCLID L RA + E E K
Sbjct: 623 FIAVLTGCSHSGLVDEAVTFFNSMESNYGITPLVEHYTCLIDALARAARFAEVEAVIGKM 682
Query: 467 PLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVA 526
P DPI+ LL+AC + + +GE AK LF L P SPYVLLSN+YA+ G GD +
Sbjct: 683 PYKDDPILWEVLLAACVVHHNAELGEFSAKHLFRLDPKNPSPYVLLSNIYATLGRHGDAS 742
Query: 527 GARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGE 567
R ++ G+ K YS + + F VA+ + +GE
Sbjct: 743 AVRALMSSRGVVKGRGYSWVNHKDGSRAFMVADDLGTDVGE 783
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 200/434 (46%), Gaps = 48/434 (11%)
Query: 34 QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQ 93
P+V N ++ + G + AR + M +RN VSW+ +I+ ++G ALE +
Sbjct: 73 HPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQG 132
Query: 94 M---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGY 150
M L P + AS +SAC + +L G++ H ++K G FV N L+ MY K G
Sbjct: 133 MLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGS 192
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
+DA+ ++ PN VSF A++ G + + +F M R G+ D + + L
Sbjct: 193 VADAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGA 252
Query: 211 CS--------VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLI 262
C+ V+ ++ +H L V+ S+ VGN+++ LY+K + EA K F +
Sbjct: 253 CAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESL 312
Query: 263 EEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG 322
++SWN I YE+ + V E + G P++ T++++LA+C
Sbjct: 313 SSVSIVSWNILITGYGQLGCYERAMEVL-EFMQESGFEPNEVTYSNMLASC--------- 362
Query: 323 KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH 382
I+ R DV A +F+++ +V +WNT+++ +
Sbjct: 363 -------IKAR---DVPSARA----------------MFDKIPKPSVTTWNTLLSGYGQE 396
Query: 383 RLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEH 442
L + LF +M+ ++PD T +L++C+ G + G+ ++ + + D+
Sbjct: 397 ELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLL-LHNDMFV 455
Query: 443 FTCLIDLLGRAGKL 456
+ LID+ + G++
Sbjct: 456 ASGLIDIYSKCGQV 469
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 113/227 (49%), Gaps = 7/227 (3%)
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV-KCKLESNPFVGNTIMALYSKFN 250
+L GL D F +E+ S+S G+ H L + N + N ++ +
Sbjct: 36 VLAAGLAADTFLLNRLVELYSLS-----GLPCHALRAFRALPHPNVYSYNAAISAACRAG 90
Query: 251 LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
+ A + +++ +SWNT IAA + + L +++ M + G+ P +FT AS+L
Sbjct: 91 DLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQE-GLAPTNFTLASVL 149
Query: 311 AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVV 370
+AC +A++ G++ H +++ L+ V N L+ MY KCG ++ + +LF+ M N V
Sbjct: 150 SACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEV 209
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
S+ ++ A AL+LF +M TGI+ D V +L AC A
Sbjct: 210 SFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQA 256
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 191/559 (34%), Positives = 308/559 (55%), Gaps = 6/559 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
SI S+L C+ + G +H V+K G+ V V N ++++Y KCG + +R+VFDE+
Sbjct: 111 SIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEI 170
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
SERN VSW+A+I+ + ALE F M + PN F+S + ++ G+
Sbjct: 171 SERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGK 230
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+IH +SL+FG S FV N+LI MY K G S A V+ + E N+VS+NA++A F +N+
Sbjct: 231 EIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNR 290
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
++ + M G +P+ +F L C+ LR G +H ++ + FV N
Sbjct: 291 LELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSN 350
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+ +Y+K + A + F+ I +D +S+N I S + + L +F EM G++
Sbjct: 351 ALTDMYAKCGCLNLARRVFK-ISLRDEVSYNILIIGYSQTTNCSESLRLFLEMG-IKGMK 408
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D ++ +++ACA LA+++ GK++H +R L+ + + NAL++ Y KCG I + K+
Sbjct: 409 LDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKV 468
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F ++ R+ SWN++I + A+ LFE MK G++ DSV++I +L+AC+H GLV
Sbjct: 469 FRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLV 528
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+EG+ YF M+ I P H+ C++DLLGRAG + EA + + P+ D V G LL
Sbjct: 529 EEGKKYFEHMQ-VQNIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLG 587
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ + + A+ LF L+P + Y +LSN+YA G W + RK++K G KK
Sbjct: 588 ACRIHGYIELAHWAAEHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKN 647
Query: 541 PSYSMIEVQGTFEKFTVAE 559
P S +++ F E
Sbjct: 648 PGCSWVQIDNQVHAFVAGE 666
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/421 (33%), Positives = 237/421 (56%), Gaps = 6/421 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L C+ + ++Q+G +H V K+G DV V N +L Y CG + ++VFDEM ER+
Sbjct: 13 VLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEMLERD 72
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISACAGIQSLVKGQQIH 123
+VSW+++I G + A+ F +M+L PN S + CAG++ V G+QIH
Sbjct: 73 VVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIH 132
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
Y +K G S VGN+L+ +Y K GY D+ V+ E E N VS+NA+I ++ +
Sbjct: 133 CYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQ 192
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
E+F+LM+ G+ P+ +F+ L + G +H +++ LES+ FV N ++
Sbjct: 193 DALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALI 252
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K +A F I EK+++SWN +A + + + ++M D G P+
Sbjct: 253 DMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQAD-GEIPNS 311
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
TF ++L ACA + ++ GK+IHA IR + D+ V NAL +MYAKCG ++ + ++F
Sbjct: 312 VTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVFKI 371
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
L R+ VS+N +I ++ +L+LF +M G+K D V+++G+++AC + +K+G
Sbjct: 372 SL-RDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQG 430
Query: 424 E 424
+
Sbjct: 431 K 431
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 191/359 (53%), Gaps = 3/359 (0%)
Query: 99 NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY 158
+++ F + ACA S+ KG++IH K G+ S FVGN+L+ Y G D V+
Sbjct: 6 DDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVF 65
Query: 159 GEAFEPNLVSFNALIAGFVENQQPEKGFEVF-KLMLRQGLLPDRFSFAGGLEICSVSNDL 217
E E ++VS+N++I F + + +F ++ LR G P+ S L +C+ D
Sbjct: 66 DEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDG 125
Query: 218 RKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC 277
G +HC VK L+S VGN ++ +Y K + ++ + F I E++ +SWN I +
Sbjct: 126 VTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSL 185
Query: 278 SHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD 337
++ + L +F+ M D GV+P+ TF+S+L L GK+IH +R L D
Sbjct: 186 AYLERNQDALEMFRLMI-DGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESD 244
Query: 338 VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA 397
+ V NAL++MYAK G + +FN++ +N+VSWN ++A A +RL +A+ L QM+A
Sbjct: 245 IFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQA 304
Query: 398 TGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
G P+SVTF +L AC G ++ G+ +T G S D+ L D+ + G L
Sbjct: 305 DGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRT-GSSVDLFVSNALTDMYAKCGCL 362
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 151/279 (54%), Gaps = 3/279 (1%)
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
G+ D +F L+ C+ S ++KG +H + K +S+ FVGNT++ Y + +
Sbjct: 2 GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
++ F + E+D++SWN+ I S Y + + +F EM+ G RP+ + S+L CAG
Sbjct: 62 KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAG 121
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
L G+QIH ++++ L+ V VGNALV++Y KCG + S ++F+E+ RN VSWN I
Sbjct: 122 LEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAI 181
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYG 435
I + A AL++F M G+KP+SVTF +L L G+ + +G
Sbjct: 182 ITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKE-IHGFSLRFG 240
Query: 436 ISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
+ DI LID+ ++G+ L+A + +G+ IV
Sbjct: 241 LESDIFVANALIDMYAKSGRSLQASNVFNQ--IGEKNIV 277
>gi|212275047|ref|NP_001130303.1| uncharacterized protein LOC100191397 [Zea mays]
gi|194688792|gb|ACF78480.1| unknown [Zea mays]
Length = 706
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 206/641 (32%), Positives = 328/641 (51%), Gaps = 78/641 (12%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++S+L C AL G H +K+G+ V N +L +Y KCG + A ++FD M
Sbjct: 43 TLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGM 102
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL-------LPNEYIFASAISACAGIQSL 116
N VS++AM+ G Q G AL F++M + + + ACAG ++
Sbjct: 103 PSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNV 162
Query: 117 VK----GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV--------------- 157
+ Q IHA ++ G+ S VGNSL+ +Y K +A+ V
Sbjct: 163 ARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNIL 222
Query: 158 ---YGE-----------------AFEPNLVSF---------------------------- 169
YG+ FEPN V++
Sbjct: 223 ITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIPKPSV 282
Query: 170 ---NALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCL 226
N L++G+ + + ++ ++F+ M Q + PDR + A L CS + G +H
Sbjct: 283 TTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSA 342
Query: 227 TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKG 286
+V+ L ++ FV + ++ +YSK +G A F ++ E+D++ WN+ I+ + + E+
Sbjct: 343 SVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEA 402
Query: 287 LSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVN 346
K+M ++G+ P + ++AS++ CA L+S+ G+Q+HA +++ +Q+V VG +L++
Sbjct: 403 FDFLKQM-RENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLID 461
Query: 347 MYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVT 406
MYAK G + + FN M+ +N+V+WN +I +A + G A++LFE M T KPDSVT
Sbjct: 462 MYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVT 521
Query: 407 FIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
FI +LT C+H+GLV E +FNSME YGI+P +EH+TCLID L RA + E E K
Sbjct: 522 FIAVLTGCSHSGLVDEAVTFFNSMESNYGITPLVEHYTCLIDALARAARFAEVEAVIGKM 581
Query: 467 PLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVA 526
P DPI+ LL+AC + + +GE AK LF L P SPYVLLSN+YA+ G GD +
Sbjct: 582 PYKDDPILWEVLLAACVVHHNAELGEFSAKHLFRLDPKNPSPYVLLSNIYATLGRHGDAS 641
Query: 527 GARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGE 567
R ++ G+ K YS + + F VA+ + +GE
Sbjct: 642 AVRALMSSRGVVKGRGYSWVNHKDGSRAFMVADDLGTDVGE 682
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 189/405 (46%), Gaps = 48/405 (11%)
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
M +RN VSW+ +I+ ++G ALE + M L P + AS +SAC + +L G
Sbjct: 1 MPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDG 60
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
++ H ++K G FV N L+ MY K G +DA+ ++ PN VSF A++ G +
Sbjct: 61 RRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQG 120
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS--------VSNDLRKGMILHCLTVKCK 231
+ +F M R G+ D + + L C+ V+ ++ +H L V+
Sbjct: 121 GAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKG 180
Query: 232 LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK 291
S+ VGN+++ LY+K + EA K F + ++SWN I YE+ + V +
Sbjct: 181 FGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLE 240
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
M + G P++ T++++LA+C I+ R DV A
Sbjct: 241 FM-QESGFEPNEVTYSNMLASC----------------IKAR---DVPSARA-------- 272
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
+F+++ +V +WNT+++ + L + LF +M+ ++PD T +L
Sbjct: 273 --------MFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVIL 324
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
++C+ G + G+ ++ + + D+ + LID+ + G++
Sbjct: 325 SSCSRLGNFELGKQVHSASVRLL-LHNDMFVASGLIDIYSKCGQV 368
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 135/293 (46%), Gaps = 44/293 (15%)
Query: 262 IEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQH 321
+ +++ +SWNT IAA + + L +++ M + G+ P +FT AS+L+AC +A++
Sbjct: 1 MPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQE-GLAPTNFTLASVLSACGAVAALDD 59
Query: 322 GKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN 381
G++ H +++ L+ V N L+ MY KCG ++ + +LF+ M N VS+ ++ A
Sbjct: 60 GRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQ 119
Query: 382 HRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN-------------------HAGLVKE 422
AL+LF +M TGI+ D V +L AC HA +V++
Sbjct: 120 GGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRK 179
Query: 423 G------------EAYFNSMEKTYGI-------SPDIEHFTCLIDLLGRAG---KLLEAE 460
G + Y M+ I S I + LI G+ G + +E
Sbjct: 180 GFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVL 239
Query: 461 EYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLS 513
E+ ++ + + +L++C RDV + ++ +P+ T+ LLS
Sbjct: 240 EFMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKI--PKPSVTTWNTLLS 290
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 201/618 (32%), Positives = 317/618 (51%), Gaps = 53/618 (8%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCG-----KMILARK 58
++ L+ C+ K L+Q LHA +L+ G+ D L+ C + A K
Sbjct: 32 TVPILIDKCANKKHLKQ---LHAHMLRTGLFFD---PPSATKLFTACALSSPSSLDYACK 85
Query: 59 VFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQ 114
VFD++ NL +W+ +I + + + L F QM PN Y F I A +
Sbjct: 86 VFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVS 145
Query: 115 SLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIA 174
SL+ GQ IH +K + S F+ NSLI Y +G A LV+ + E ++VS+N++I+
Sbjct: 146 SLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMIS 205
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
GFV+ PE+ ++FK M + P+R + G L C+ DL G + ++
Sbjct: 206 GFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDI 265
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYE---------- 284
N + N ++ +Y K + +A + F +EEKD++SW T I + DY+
Sbjct: 266 NLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMP 325
Query: 285 ---------------------KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGK 323
+ L++F+E+ + +P++ T AS LAACA L ++ G
Sbjct: 326 REDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGG 385
Query: 324 QIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR 383
IH ++ + + + + +L++MY+KCG + + ++F + R+V W+ +IA A H
Sbjct: 386 WIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHG 445
Query: 384 LGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF 443
G +A+ LF +M+ T +KP++VTF LL AC+H+GLV EG +FN M YG+ P +H+
Sbjct: 446 HGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHY 505
Query: 444 TCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQP 503
C++D+LGRAG L EA E +K P+ V G LL ACR+ +V + E +L
Sbjct: 506 ACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDS 565
Query: 504 TTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSH- 562
YVLLSN+YA G W V+ R+ +K SGL+KEP S IEV G +F V + SH
Sbjct: 566 NNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHP 625
Query: 563 ------SKIGEINYMLKT 574
SK+ EI +K+
Sbjct: 626 LSTEIYSKLDEIVARIKS 643
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 182/571 (31%), Positives = 309/571 (54%), Gaps = 15/571 (2%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C T++ + +H V+K G + V + ++N+YAKCG M AR+VFD M RN
Sbjct: 73 LLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRN 132
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHA 124
+V+W+ ++ G Q + A+ F +M P+ Y ++ + AC+ +QSL G Q HA
Sbjct: 133 VVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHA 192
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
Y +K+ + VG++L S+Y K G DAL + E N++S+ + ++ +N P K
Sbjct: 193 YIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVK 252
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
G +F M+ + P+ F+ L C L G ++ L +K ESN V N+++
Sbjct: 253 GLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLY 312
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA-----------CSHCADYEKGLSVFKEM 293
LY K I EA + F +++ +++WN IA S C + L +F ++
Sbjct: 313 LYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKL 372
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
N G++PD FT +S+L+ C+ + +++ G+QIHA I+ DV V +L++MY+KCG
Sbjct: 373 -NLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGS 431
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
I + K F EM R +++W ++I + H + AL +FE M G++P++VTF+G+L+A
Sbjct: 432 IERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSA 491
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C+HAG+V + YF M+K Y I P ++H+ C++D+ R G+L +A + KK
Sbjct: 492 CSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEF 551
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
+ ++ C+ ++ +G A+QL L+P YVLL N+Y S + DV+ RKM++
Sbjct: 552 IWSNFIAGCKSHGNLELGFYAAEQLLSLKPKDPETYVLLLNMYLSAERFEDVSRVRKMME 611
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSK 564
+ + K +S I ++ F +H +
Sbjct: 612 EEKVGKLKDWSWISIKDKVYSFKTNGKTHPQ 642
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 192/371 (51%), Gaps = 15/371 (4%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+ + C +S + Q +H + +K G FV + L+++Y K G DA V+
Sbjct: 70 YVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNML 129
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
N+V++ L+ GFV+N QP+ VF+ ML G P ++ + L CS L+ G
Sbjct: 130 RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQ 189
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
H +K ++ + VG+ + +LYSK + +A K F I EK++ISW + ++AC+
Sbjct: 190 FHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGA 249
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
KGL +F EM ++P++FT S L+ C + S++ G Q+++ I+ ++ V N
Sbjct: 250 PVKGLRLFVEMIAV-DIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRN 308
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN------------HRLGGSALK 390
+L+ +Y K G I +++LFN M ++V+WN +IA HA HR G ALK
Sbjct: 309 SLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHR-GSEALK 367
Query: 391 LFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLL 450
LF ++ +G+KPD T +L+ C+ +++GE KT G D+ T LI +
Sbjct: 368 LFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKT-GFLSDVIVSTSLISMY 426
Query: 451 GRAGKLLEAEE 461
+ G + A +
Sbjct: 427 SKCGSIERASK 437
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 218/426 (51%), Gaps = 22/426 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++S++LH CS ++L+ G HA ++K + D V + + +LY+KCG++ A K F +
Sbjct: 170 TLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRI 229
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
E+N++SW++ +S G + L F +M + PNE+ SA+S C I SL G
Sbjct: 230 REKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGT 289
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+++ +KFGY S V NSL+ +Y+K G +A ++ + ++V++NA+IAG +
Sbjct: 290 QVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMM 349
Query: 181 QPEK--------GFEVFKLMLR---QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK 229
+ K G E KL + G+ PD F+ + L +CS + +G +H T+K
Sbjct: 350 ELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIK 409
Query: 230 CKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSV 289
S+ V +++++YSK I A KAF + + +I+W + I S ++ L +
Sbjct: 410 TGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHI 469
Query: 290 FKEMSNDHGVRPDDFTFASILAAC--AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNM 347
F++MS GVRP+ TF +L+AC AG+ S Q + ++ + +V+M
Sbjct: 470 FEDMSLA-GVRPNAVTFVGVLSACSHAGMVS-QALNYFEIMQKKYKIKPAMDHYECMVDM 527
Query: 348 YAKCGLISCSYKLFNEMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP-DSV 405
+ + G + + +M + + W+ IA +H G L + + +KP D
Sbjct: 528 FVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSH--GNLELGFYAAEQLLSLKPKDPE 585
Query: 406 TFIGLL 411
T++ LL
Sbjct: 586 TYVLLL 591
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 27/222 (12%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+L CS+ A++QG +HA +K G DVIVS ++++Y+KCG + A K F EM
Sbjct: 383 TLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEM 442
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISAC--AGIQSLVK 118
S R +++W++MI+G Q G AL F M L PN F +SAC AG+ S
Sbjct: 443 STRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVS--- 499
Query: 119 GQQIHAYSL---KFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIA 174
Q ++ + + K+ ++ M++++G AL + +EP+ ++ IA
Sbjct: 500 -QALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIA 558
Query: 175 GFVENQQPEKGF--------------EVFKLMLRQGLLPDRF 202
G + E GF E + L+L L +RF
Sbjct: 559 GCKSHGNLELGFYAAEQLLSLKPKDPETYVLLLNMYLSAERF 600
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 194/584 (33%), Positives = 331/584 (56%), Gaps = 15/584 (2%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+S++ + + L++G +HA VL+ G I + VSN ++N+YAKCG + A +VF M
Sbjct: 385 LSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLM 444
Query: 64 SERNLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
R+ +SW+ +I+ Q G ++ Q + P+ + S +S+CAG+ L GQ
Sbjct: 445 EARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQ 504
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H ++K+G + V N+L+ MY + G S+ ++ ++VS+N+++ +Q
Sbjct: 505 QLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQ 564
Query: 181 QP-EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
P + +VF M++ GL+P++ +F L + + L G +H + +K + + V
Sbjct: 565 APITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVD 624
Query: 240 NTIMALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N +M+ Y+K + E+ F R+ +D ISWN+ I+ + ++ + M +
Sbjct: 625 NALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQ 684
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ D TF+ +L ACA +A+++ G ++HA +R L DV V +ALV+MY+KCG I +
Sbjct: 685 MM-DHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYAS 743
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
K+F+ M +N SWN++I+ +A H LG AL++FE+M+ +G PD VTF+ +L+AC+HAG
Sbjct: 744 KVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAG 803
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV+ G YF ME YGI P IEH++C+IDLLGRAG+L + +EY K+ P+ + ++ T+
Sbjct: 804 LVERGLDYFELMED-YGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTV 862
Query: 479 LSAC---RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
L AC + R + +G ++ L L+P YVL S +A+ G W D A AR +K +
Sbjct: 863 LVACQQSKHRAKIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWEDTAKARAAMKGA 922
Query: 536 GLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI----NYMLKTL 575
+KKE S + + F + SH EI N++++ +
Sbjct: 923 AVKKEAGRSWVTLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQKI 966
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 224/459 (48%), Gaps = 24/459 (5%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
SLH V+K G+ D+ ++NH++N YAK ++ AR+VFD M RN VSW+ +ISGH +G
Sbjct: 86 SLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSG 145
Query: 83 EHLLALEFFSQM-----HLLPNEYIFASAISAC--AGIQSLVKGQQIHAYSLKFGYASIS 135
A F M P + F S + AC +G L Q+H K + S +
Sbjct: 146 LPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNT 205
Query: 136 FVGNSLISMY--MKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLML 193
V N+LISMY VG A V+ +L+++NAL++ + + F +F+ M
Sbjct: 206 TVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQ 265
Query: 194 RQG----LLPDRFSFAGGLEICSVSNDLRKGMI--LHCLTVKCKLESNPFVGNTIMALYS 247
L P +F G L + + G++ L +K S+ +VG+ +++ ++
Sbjct: 266 YDDSGIELRPTEHTF-GSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFA 324
Query: 248 KFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFA 307
+ ++ EA+ + ++E++ ++ N IA E +F + V D T+
Sbjct: 325 RHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVD--TYV 382
Query: 308 SILAACAGLASVQH----GKQIHAHLIRM-RLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+L+A A ++ + G+++HAH++R + + + V N LVNMYAKCG I + ++F
Sbjct: 383 VLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQ 442
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
M R+ +SWNTII A + +A+ + M+ I P + I L++C GL+
Sbjct: 443 LMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAA 502
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
G+ K +G+ D L+ + G G++ E E
Sbjct: 503 GQQLHCDAVK-WGLYLDTSVSNALVKMYGECGRMSECWE 540
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 155/317 (48%), Gaps = 17/317 (5%)
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ +H +K G F+ N L++ Y K A V+ N VS+ LI+G V +
Sbjct: 85 ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144
Query: 180 QQPEKGFEVFKLMLRQ--GLLPDRFSFAGGLEICSVSNDLRKGMI--LHCLTVKCKLESN 235
PE F +F+ MLR+ G P F+F L C S R G +H L K + SN
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSN 204
Query: 236 PFVGNTIMALYSKFNLIGE---AEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
V N ++++Y + +G A++ F +DLI+WN ++ + D ++F+
Sbjct: 205 TTVCNALISMYGSCS-VGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRA 263
Query: 293 MS-NDHGV--RPDDFTFASILAACAGLASVQHG--KQIHAHLIRMRLNQDVGVGNALVNM 347
M +D G+ RP + TF S++ A L+S G Q+ +++ + D+ VG+ALV+
Sbjct: 264 MQYDDSGIELRPTEHTFGSLITATY-LSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSA 322
Query: 348 YAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK-ATGIKPDSVT 406
+A+ G++ + ++ + RN V+ N +IA + G +A ++F + + + D T
Sbjct: 323 FARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVD--T 380
Query: 407 FIGLLTACNHAGLVKEG 423
++ LL+A ++G
Sbjct: 381 YVVLLSAIAEFSTAEQG 397
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 71/111 (63%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S +L+ C+ AL++G+ +HA L+ ++ DV+V + ++++Y+KCG++ A KVF M
Sbjct: 690 TFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSM 749
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
S++N SW++MISG+ + G ALE F +M P+ F S +SAC+
Sbjct: 750 SQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACS 800
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 188/558 (33%), Positives = 311/558 (55%), Gaps = 4/558 (0%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G+ HA +K DV V + ++N+Y K G M+ ARKVFD + ERN VSW+ +ISG+
Sbjct: 132 GLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAM 191
Query: 81 AGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
A E F M +++I+ S +SA + G+QIH +LK G SI+ V
Sbjct: 192 ERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASV 251
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
GN+L++MY K G DAL + + + + ++++A+I G+ + + +F M G
Sbjct: 252 GNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGN 311
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
P F+F G + CS L +G +H ++K E + ++ +Y+K + +A K
Sbjct: 312 KPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARK 371
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F ++E D++ W + I+ + + E L+++ M + + P + T AS+L AC+ LA
Sbjct: 372 GFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMER-IMPHELTMASVLRACSSLA 430
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
+++ GKQIHA I+ + +V +G+AL MYAKCG + +F M R++++WN +I+
Sbjct: 431 ALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMIS 490
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
+ + G AL+LFE+++ KPD VTF+ +L+AC+H GLV+ G+ YF M +GI
Sbjct: 491 GLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIV 550
Query: 438 PDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQ 497
P +EH+ C++D+L RAGKL E +E+ + + + LL ACR R+ +G ++
Sbjct: 551 PRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEK 610
Query: 498 LFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTV 557
L L +S Y+LLS++Y + G DV R+++K G+ KEP S IE++ F V
Sbjct: 611 LMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVV 670
Query: 558 AEFSHSKIGEINYMLKTL 575
+ H +I +I L+ L
Sbjct: 671 GDQIHPQIVKICSELRRL 688
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 158/544 (29%), Positives = 286/544 (52%), Gaps = 14/544 (2%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+S LL C++ K LQ+G ++HA +L+ G V ++N ++NLYAKCG ++ A+ VF+
Sbjct: 11 RSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFES 70
Query: 63 MSERNLVSWSAMISGHHQAGE--HLLALEFFSQM---HLLPNEYIFASAISACAGIQSLV 117
++ +++VSW+ +I+G+ Q G + +E F +M + LPN + F+ +A +
Sbjct: 71 ITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETF 130
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G Q HA ++K FVG+SLI+MY K+G DA V+ E N VS+ +I+G+
Sbjct: 131 GGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYA 190
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ + +E+F LM R+ D+F + L +V + + G +HCL +K L S
Sbjct: 191 MERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIAS 250
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
VGN ++ +Y K + +A K F L +KD I+W+ I + D + L++F M + +
Sbjct: 251 VGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNM-HLN 309
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G +P +FTF ++ AC+ + +++ GKQIH + ++ + ALV+MYAKCG + +
Sbjct: 310 GNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDA 369
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
K F+ + ++V W ++I+ +A + +AL L+ +M+ I P +T +L AC+
Sbjct: 370 RKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSL 429
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
+++G+ ++ YG S ++ + L + + G L + ++ P +D +
Sbjct: 430 AALEQGKQ-IHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMP-SRDIMTWNA 487
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGA----RKMLK 533
++S + + L ++L H TT YV N+ ++ G V R ML
Sbjct: 488 MISGLSQNGEGLKALELFEELRH--GTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLD 545
Query: 534 DSGL 537
+ G+
Sbjct: 546 EFGI 549
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 193/389 (49%), Gaps = 9/389 (2%)
Query: 93 QMHLLPNEY-IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
++LLP ++ F + C + L KG+ IHA L+ G S ++ NSL+++Y K G
Sbjct: 2 NLYLLPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSI 61
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF--EVFKLMLRQGLLPDRFSFAGGLE 209
A LV+ ++VS+N LI G+ + F E+F+ M + LP+ +F+G
Sbjct: 62 VKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFT 121
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
S S + G+ H L +K + FVG++++ +Y K + +A K F I E++ +S
Sbjct: 122 AASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVS 181
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
W T I+ + + +F M + G D F + S+L+A V +GKQIH
Sbjct: 182 WATIISGYAMERMAFEAWELFXLMRREEGAH-DKFIYTSVLSALTVPDLVHYGKQIHCLA 240
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
++ L VGNALV MY KCG + + K F ++ ++W+ +I +A AL
Sbjct: 241 LKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEAL 300
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
LF M G KP TF+G++ AC+ G ++EG+ K G I T L+D+
Sbjct: 301 NLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKA-GYECQIYFMTALVDM 359
Query: 450 LGRAGKLLEAEEYTKKFPLGQDP-IVLGT 477
+ G L++A K F ++P IVL T
Sbjct: 360 YAKCGSLVDAR---KGFDYLKEPDIVLWT 385
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 26/199 (13%)
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P +F +L C +Q GK IHA L+R V + N+LVN+YAKCG I + +
Sbjct: 8 PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSA--LKLFEQMKATGIKPDSVTFIGLLTACN--- 415
F + +++VVSWN +I ++ G + ++LF++M+A P+ TF G+ TA +
Sbjct: 68 FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSP 127
Query: 416 --------HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
HA +K Y D+ + LI++ + G +L+A + P
Sbjct: 128 ETFGGLQAHALAIKTSNFY------------DVFVGSSLINMYCKIGCMLDARKVFDTIP 175
Query: 468 LGQDPIVLGTLLSACRLRR 486
++ + T++S + R
Sbjct: 176 -ERNTVSWATIISGYAMER 193
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 205/641 (31%), Positives = 325/641 (50%), Gaps = 77/641 (12%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+LL C +T + +LH+ ++K P+ + N++++ YAK G + A KVFD+M
Sbjct: 14 ALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHP 73
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAG---IQSLVK----- 118
NL SW+ ++S + + G + +E+ + + S IS AG I VK
Sbjct: 74 NLYSWNTILSAYSKLGR-VSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLM 132
Query: 119 -----------------------------GQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
G+QIH + +KFG+ S FVG+ L+ MY K+G
Sbjct: 133 LKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMG 192
Query: 150 YSSDALLVYGEAFEPNLVSFNALI-------------------------------AGFVE 178
S A V+ E E N+V +N LI GF +
Sbjct: 193 MISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQ 252
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N ++F+ M + L D+++F L C L++G +H ++ + N FV
Sbjct: 253 NGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFV 312
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
+ ++ +Y K I AE F+ + K+++SW + E+ + F +M +G
Sbjct: 313 ASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQK-YG 371
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ PDDFT S++++CA LAS++ G Q HA + L + V NALV +Y KCG I S+
Sbjct: 372 IEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSH 431
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+LFNE+ ++ V+W +++ +A + LFE M A G+KPD VTFIG+L+AC+ AG
Sbjct: 432 RLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAG 491
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV++G F SM +GI P +H+TC+IDL RAG++ EA + K P D I TL
Sbjct: 492 LVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATL 551
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
LS+CR ++ IG+ A+ L L P T+ YVLLS++YA+ G W +VA RK ++D GL+
Sbjct: 552 LSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLR 611
Query: 539 KEPSYSMIEVQGTFEKFTVAEFS-------HSKIGEINYML 572
KEP S I+ + F+ + S +S++ ++NY +
Sbjct: 612 KEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKM 652
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 211/433 (48%), Gaps = 44/433 (10%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S+LL SK ++ G +H V+K G V V + ++++Y+K G + ARKVFDE+
Sbjct: 145 TFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDEL 204
Query: 64 SERNLV-------------------------------SWSAMISGHHQAGEHLLALEFFS 92
E+N+V SW++MI+G Q G A++ F
Sbjct: 205 PEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFR 264
Query: 93 QM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
+M +L ++Y F S ++AC G+ +L +G+Q+HAY ++ Y FV ++L+ MY K
Sbjct: 265 EMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCK 324
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
A V+ + N+VS+ A++ G+ +N E+ + F M + G+ PD F+ +
Sbjct: 325 NIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVIS 384
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
C+ L +G H + L S V N ++ LY K I ++ + F I KD ++
Sbjct: 385 SCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVT 444
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
W ++ + + + +F+ M HG++PD TF +L+AC+ V+ G QI +
Sbjct: 445 WTALVSGYAQFGKANETIGLFESMLA-HGLKPDKVTFIGVLSACSRAGLVEKGNQIFESM 503
Query: 330 IR---MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAA---HANH 382
I + QD +++++++ G I + N+M + +SW T++++ + N
Sbjct: 504 INEHGIVPIQDHYT--CMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNM 561
Query: 383 RLGGSALKLFEQM 395
+G A + ++
Sbjct: 562 DIGKWAAEFLMEL 574
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 196/442 (44%), Gaps = 65/442 (14%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+ + + C + K + +H++ +K +F+ N+LIS Y K+G A V+ +
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71
Query: 163 EPNL-------------------------------VSFNALIAGFVENQQPEKGFEVFKL 191
PNL VS+N+LI+G+ + + + L
Sbjct: 72 HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNL 131
Query: 192 MLRQ--GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF 249
ML+ +R +F+ L + S ++ G +H VK S FVG+ ++ +YSK
Sbjct: 132 MLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKM 191
Query: 250 NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV---------- 299
+I A K F + EK+++ +NT I C E +F EM +
Sbjct: 192 GMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFT 251
Query: 300 --------------------RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG 339
+ D +TF S+L AC G+ ++Q GKQ+HA++IR ++
Sbjct: 252 QNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIF 311
Query: 340 VGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG 399
V +ALV+MY KC I + +F +M +NVVSW ++ + + A+K F M+ G
Sbjct: 312 VASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYG 371
Query: 400 IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
I+PD T ++++C + ++EG A F++ T G+ I L+ L G+ G + ++
Sbjct: 372 IEPDDFTLGSVISSCANLASLEEG-AQFHARALTSGLISFITVSNALVTLYGKCGSIEDS 430
Query: 460 EEYTKKFPLGQDPIVLGTLLSA 481
+ +D + L+S
Sbjct: 431 HRLFNEISF-KDEVTWTALVSG 451
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 185/575 (32%), Positives = 323/575 (56%), Gaps = 4/575 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++ L C+ L G LH+ +K G++P+V V+N +L +YAKC + A ++F+ M
Sbjct: 244 TLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELM 303
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+ +LV+W+ MISG Q G + A F M P+ S + A + L +G+
Sbjct: 304 PQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGK 363
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H Y ++ F+ ++L+ +Y K A +Y A ++V + +I+G+V N
Sbjct: 364 EVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNG 423
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E+ ++F+ +L Q + P+ + A L C+ L G +H ++ E +V +
Sbjct: 424 MSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVES 483
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+M +Y+K + + F + +KD ++WN+ I++ S ++ L +F++M + G++
Sbjct: 484 ALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCME-GIK 542
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
++ T ++ L+ACA L ++ +GK+IH I+ + D+ +AL++MYAKCG + + ++
Sbjct: 543 YNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRV 602
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F M +N VSWN+II+A+ H L ++ L M+ G KPD VTF+ L++AC HAGLV
Sbjct: 603 FEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLV 662
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+EG F M K Y I+P +EHF C++DL R+GKL +A ++ P D + G LL
Sbjct: 663 EEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLH 722
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ R+V + + +++LF L P + YVL+SN+ A G W V+ R+++KD+ + K
Sbjct: 723 ACRVHRNVELADIASQELFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKI 782
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P YS ++V + F ++ SH + +I LKTL
Sbjct: 783 PGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKTL 817
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/471 (26%), Positives = 230/471 (48%), Gaps = 23/471 (4%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKC-GKMILARKVF 60
A + ++L C L G+ +HA + G D NH L L+ + G +LAR+
Sbjct: 32 ADRLLAVLRGCVSAPHLPLGLQIHARAVVSGALSD---HNH-LALHTRLLGMYVLARRFR 87
Query: 61 DEMS---------ERNLVSWSAMISGHHQAGEHLLALEFFSQMH-----LLPNEYIFASA 106
D ++ + + W+ +I G AG+H LA+ F+ +M P+ +
Sbjct: 88 DAVAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYV 147
Query: 107 ISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNL 166
+ +CA + ++ G+ +H + G A+ +VG++L+ MY G +A + E +
Sbjct: 148 VKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDC 207
Query: 167 VSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCL 226
V +N ++ G ++ + +F+ M G P+ + A L +C+ DL G LH L
Sbjct: 208 VLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSL 267
Query: 227 TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKG 286
VKC LE V NT++A+Y+K + +A + F L+ + DL++WN I+ C + +
Sbjct: 268 AVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEA 327
Query: 287 LSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVN 346
+F +M G RPD T S+L A L ++ GK++H +++R +N DV + +ALV+
Sbjct: 328 FGLFYDMQRS-GARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVD 386
Query: 347 MYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVT 406
+Y KC + + L++ +VV +T+I+ + + + AL++F + IKP++VT
Sbjct: 387 IYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVT 446
Query: 407 FIGLLTACNHAGLVKEGEAYFN-SMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+L C + G+ + Y +E + L+D+ + G+L
Sbjct: 447 IASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVE--SALMDMYAKCGRL 495
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 148/284 (52%), Gaps = 11/284 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A +I+S+L C+ AL G +H VL+ + V + ++++YAKCG++ L+ +F
Sbjct: 444 AVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFL 503
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
+MS+++ V+W++MIS Q G+ AL+ F QM + N ++A+SACA + ++
Sbjct: 504 KMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYY 563
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G++IH ++K + F ++LI MY K G AL V+ + N VS+N++I+ +
Sbjct: 564 GKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGA 623
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPF 237
+ ++ + M +G PD +F + C+ + + +G+ + C+T K +
Sbjct: 624 HGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRME 683
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEE----KDLISWNTFIAAC 277
++ LYS+ G+ +KA + I + D W + AC
Sbjct: 684 HFACMVDLYSRS---GKLDKAIQFIADMPFKPDAGIWGALLHAC 724
>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
Length = 766
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 188/579 (32%), Positives = 324/579 (55%), Gaps = 6/579 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S + C++ + G +HA LK D+IV N ++ +Y+K G + +F+ +
Sbjct: 154 ALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERI 213
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISACAGIQSLVKG 119
+++L+SW ++I+G Q G + AL+ F +M + PNE+ F SA AC + S G
Sbjct: 214 KDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYG 273
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+QIH S+K+ +VG SL MY + A + + P+LVS+N+++ +
Sbjct: 274 EQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVE 333
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ +F M GL PD + G L C + L G ++H VK L+ + V
Sbjct: 334 GLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVC 393
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N+++++Y++ + + A F I+++D+++WN+ + AC+ E+ L +F + N
Sbjct: 394 NSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFS-LLNKSEP 452
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
D + ++L+A A L + KQ+HA+ + L D + N L++ YAKCG + + +
Sbjct: 453 SLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMR 512
Query: 360 LFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
LF M +R+V SW+++I +A A LF +M++ GI+P+ VTFIG+LTAC+ G
Sbjct: 513 LFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVG 572
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
V EG Y++ ME YGI P EH +C++DLL RAGKL EA + + P D I+ TL
Sbjct: 573 FVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTL 632
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L+A ++ D+ +G+R A+ + ++ P+ ++ YVLL N+YA+ G W + A +K ++ SG+K
Sbjct: 633 LAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVK 692
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
K P S ++++G + F V + SH + EI ML+ + +
Sbjct: 693 KSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLELIGM 731
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 149/469 (31%), Positives = 251/469 (53%), Gaps = 21/469 (4%)
Query: 6 SSLLHHCSKTKALQQGISLHA-AVLKMGIQPD------VIVSNHVLNLYAKCGKMILARK 58
++L+ CS+ ++L QG +H V PD ++ NH++ +Y +C AR+
Sbjct: 48 AALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQ 107
Query: 59 VFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQS 115
VFDEM RN VSW+++I+ H Q G AL FS M +++ SA+ AC +
Sbjct: 108 VFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGD 167
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
+ G+Q+HA++LK S V N+L++MY K G D +++ + +L+S+ ++IAG
Sbjct: 168 VGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAG 227
Query: 176 FVENQQPEKGFEVFKLMLRQGL-LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
F + + +VF+ M+ +G P+ F F C G +H L++K +L+
Sbjct: 228 FAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDR 287
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
+ +VG ++ +Y++ + A AF IE DL+SWN+ + A S + L +F EM
Sbjct: 288 DLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM- 346
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
D G+RPD T +L AC G ++ HG+ IH++L+++ L+ DV V N+L++MYA+C +
Sbjct: 347 RDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDL 406
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
S + +F+E+ ++VV+WN+I+ A A H LKLF + + D ++ +L+A
Sbjct: 407 SSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSAS 466
Query: 415 NHAG---LVKEGEAY-FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
G +VK+ AY F + G+ D LID + G L +A
Sbjct: 467 AELGYFEMVKQVHAYAFKA-----GLVDDRMLSNTLIDTYAKCGSLDDA 510
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 201/387 (51%), Gaps = 9/387 (2%)
Query: 103 FASAISACAGIQSLVKGQQIHAY-------SLKFGYASISFVGNSLISMYMKVGYSSDAL 155
+A+ +SAC+ ++SL +G+++H + S A + +GN LI+MY + A
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN 215
V+ E N VS+ ++IA V+N + +F MLR G D+F+ + C+
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 216 DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIA 275
D+ G +H +K + S+ V N ++ +YSK L+ + F I++KDLISW + IA
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226
Query: 276 ACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN 335
+ + L VF+EM + P++F F S AC + S ++G+QIH I+ RL+
Sbjct: 227 GFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 286
Query: 336 QDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM 395
+D+ VG +L +MYA+C + + F + ++VSWN+I+ A++ L AL LF +M
Sbjct: 287 RDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM 346
Query: 396 KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGK 455
+ +G++PD +T GLL AC + G + + K G+ D+ L+ + R
Sbjct: 347 RDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKL-GLDGDVSVCNSLLSMYARCSD 405
Query: 456 LLEAEEYTKKFPLGQDPIVLGTLLSAC 482
L A + + QD + ++L+AC
Sbjct: 406 LSSAMDVFHEIK-DQDVVTWNSILTAC 431
>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 690
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 195/561 (34%), Positives = 316/561 (56%), Gaps = 7/561 (1%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G +H V+K G DV+V++ ++ +YAK + +VFDEM ER++ SW+ +IS +Q
Sbjct: 125 GRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQ 184
Query: 81 AGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
G+ ALE F +M PN AISAC+ + L +G++IH LK + +V
Sbjct: 185 RGDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYV 244
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
++L+ MY + + A V+ + +LV++N++I G+V + E+ M+ +G
Sbjct: 245 NSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGT 304
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
P + + L CS S +L G +H ++ ++++ ++ +++ LY K + AE
Sbjct: 305 RPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAET 364
Query: 258 AFRLIEEKDLI-SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
F L +KD++ SWN I+ ++ K + V+ +M + GV+PD TF S+L+ C+ L
Sbjct: 365 VF-LKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVS-VGVQPDIVTFTSVLSTCSQL 422
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
A+++ GKQIH + RL D + +AL++MY+KCG + + ++FN + ++VVSW +I
Sbjct: 423 AALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVSWTVMI 482
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
+A+ +H AL F++M+ G+KPD VTF+ +L+AC HAGL+ EG YF+ M YGI
Sbjct: 483 SAYGSHGQPREALYHFDEMQKFGVKPDGVTFLAVLSACGHAGLIDEGVKYFSQMRSKYGI 542
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI-VLGTLLSACRLRRDVVIGERLA 495
IE ++CLID+LGRAG+LLEA ++ P +D +L TL AC L RD ++G +A
Sbjct: 543 EASIEQYSCLIDILGRAGRLLEAYGILQQKPETRDNAELLSTLFCACCLHRDHLLGYTIA 602
Query: 496 KQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKF 555
K L P S Y +L NLYAS W R +K+ G++K+P S IE+ F
Sbjct: 603 KLLVEKYPDDASTYTVLFNLYASGESWDAAKRVRLKMKEVGMRKKPGCSWIEMNEKVCHF 662
Query: 556 TVAEFSHSKIGEINYMLKTLS 576
+ SH + + L LS
Sbjct: 663 FAEDRSHPQAENVYECLALLS 683
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 125/480 (26%), Positives = 245/480 (51%), Gaps = 8/480 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
SLL C+ TK+L+Q +H +L +G++ DV++ ++N+Y C AR VF+ + R
Sbjct: 8 SLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENIDIR 67
Query: 67 NLVS-WSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQQ 121
+ V W++++SG+ + L+ F ++ +P+ + + + I A + G+
Sbjct: 68 SDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGRM 127
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
IH +K G+ V +SL+ MY K D++ V+ E E ++ S+N +I+ F +
Sbjct: 128 IHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQRGD 187
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
EK E+F M R P+ S + CS L +G +H +K + E + +V +
Sbjct: 188 AEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYVNSA 247
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y + + + A + F+ + K L++WN+ I D + + + M + G RP
Sbjct: 248 LVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIE-GTRP 306
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
T SIL AC+ ++ HGK +H ++IR ++ D+ + +L+++Y KCG + + +F
Sbjct: 307 SQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETVF 366
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ V SWN +I+ + + A+ +++QM + G++PD VTF +L+ C+ ++
Sbjct: 367 LKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAALE 426
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+G+ S+ ++ + D + L+D+ + G + EA P +D + ++SA
Sbjct: 427 KGKQIHLSISES-RLETDELLLSALLDMYSKCGNVKEASRIFNSIP-KKDVVSWTVMISA 484
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L CS+ AL++G +H ++ + ++ D ++ + +L++Y+KCG + A ++F+ +
Sbjct: 411 TFTSVLSTCSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEASRIFNSI 470
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISAC 110
++++VSW+ MIS + G+ AL F +M + P+ F + +SAC
Sbjct: 471 PKKDVVSWTVMISAYGSHGQPREALYHFDEMQKFGVKPDGVTFLAVLSAC 520
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 205/605 (33%), Positives = 318/605 (52%), Gaps = 51/605 (8%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLN---LYAKCGKMILARKVFDEM 63
SLLH+C K LQ +HA ++K G+ + +L L + A VF+ +
Sbjct: 7 SLLHNC---KTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETI 63
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
E NL+ W+ M GH + + + A++ + M LLPN Y F + +CA ++ +GQ
Sbjct: 64 QEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQ 123
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG--------------------- 159
QIH + LK GY +V SLISMY+K G DA V+
Sbjct: 124 QIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRG 183
Query: 160 ----------EAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
E ++VS+NA+I+G+ + ++ ++FK M++ + PD + +
Sbjct: 184 YIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVS 243
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
C+ S ++ G +H L SN + N ++ LYSK + A F+ + KD+IS
Sbjct: 244 ACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVIS 303
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
WNT I +H Y++ L +F+EM G P+D T SIL ACA L ++ G+ IH +
Sbjct: 304 WNTMIGGYTHLNLYKEALLLFQEMLRS-GENPNDVTMLSILPACAQLGAIDFGRWIHVY- 361
Query: 330 IRMRLNQDVGVGNA------LVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR 383
I R+ GV NA L++MYAKCG I ++++FN M HR + + N +I A H
Sbjct: 362 IDKRIK---GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHG 418
Query: 384 LGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF 443
+A +F +M+ GI+PD +TF+GLL+AC+H+G++ G F SM + Y I+P +EH+
Sbjct: 419 RANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHY 478
Query: 444 TCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQP 503
C+IDLLG G EAEE + D ++ +LL AC++ +V +GE A++L ++P
Sbjct: 479 GCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEP 538
Query: 504 TTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHS 563
YVLLSN+YA+ G W +VA R +L D G+KK P S IE+ +F + + H
Sbjct: 539 ENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHP 598
Query: 564 KIGEI 568
+ EI
Sbjct: 599 RNREI 603
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 181/557 (32%), Positives = 313/557 (56%), Gaps = 4/557 (0%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+H+ K+G + V + +++ Y+ C + A VF+ + ++ V W+AM+S + +
Sbjct: 184 VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDC 243
Query: 84 HLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
A FS+M + PN + S + A + S+V G+ IH ++K + VG +
Sbjct: 244 PENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGA 303
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
L+ MY K G DA L + +++ + +I+ + ++ Q E+ FE+F ++R +LP+
Sbjct: 304 LLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPN 363
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+S + L+ C+ L G +H +K ES+ FVGN +M Y+K N + + K F
Sbjct: 364 EYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFS 423
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ + + +SWNT + S E+ LSVF EM + T++S+L ACA AS++
Sbjct: 424 SLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQ-MPCTQVTYSSVLRACASTASIR 482
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
H QIH + + N D +GN+L++ YAKCG I + K+F ++ R+++SWN II+ +A
Sbjct: 483 HAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYA 542
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
H AL+LF++M + ++ + +TF+ LL+ C+ GLV G + F+SM +GI P +
Sbjct: 543 LHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSM 602
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH 500
EH+TC++ LLGRAG+L +A ++ P +V LLS+C + ++V +G A+++
Sbjct: 603 EHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILE 662
Query: 501 LQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEF 560
++P + YVLLSN+YA+ G VA RK +++ G++K P S +E++G F+V
Sbjct: 663 IEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSV 722
Query: 561 SHSKIGEINYMLKTLSL 577
H + IN ML+ L+L
Sbjct: 723 DHPDMRVINAMLEWLNL 739
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/458 (28%), Positives = 226/458 (49%), Gaps = 11/458 (2%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGI--QPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
L C + G ++H V++ G + D+ +N +LN+Y K G + AR++FD M ER
Sbjct: 66 LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPER 125
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQQIH 123
N+VS+ ++ H Q G+ A F ++ N+++ + + + + +H
Sbjct: 126 NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVH 185
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ + K G+ +FVG+ LI Y SDA V+ + V + A+++ + EN PE
Sbjct: 186 SCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPE 245
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLE--ICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
F VF M G P+ F+ L+ +C S L KG +H +K ++ P VG
Sbjct: 246 NAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKG--IHGCAIKTLNDTEPHVGGA 303
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y+K I +A AF +I D+I + I+ + E+ +F + V P
Sbjct: 304 LLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRS-SVLP 362
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
++++ +S+L AC + + GKQIH H I++ D+ VGNAL++ YAKC + S K+F
Sbjct: 363 NEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIF 422
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ + N VSWNTI+ + LG AL +F +M+A + VT+ +L AC ++
Sbjct: 423 SSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIR 482
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
S+EK+ + D LID + G + +A
Sbjct: 483 HAGQIHCSIEKST-FNNDTVIGNSLIDTYAKCGYIRDA 519
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 199/412 (48%), Gaps = 24/412 (5%)
Query: 15 TKALQQGISLHAAVLKMGIQPDVI---------VSNHVLNLYAKCGKMILARKVFDEMSE 65
T L+ + L + VL GI I V +L++YAKCG + AR F+ +
Sbjct: 267 TSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPY 326
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQI 122
+++ S MIS + Q+ ++ A E F ++ +LPNEY +S + AC + L G+QI
Sbjct: 327 DDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQI 386
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H +++K G+ S FVGN+L+ Y K +L ++ + N VS+N ++ GF ++
Sbjct: 387 HNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLG 446
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E+ VF M + + +++ L C+ + +R +HC K ++ +GN++
Sbjct: 447 EEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSL 506
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ Y+K I +A K F+ + E+D+ISWN I+ + L +F M N V +
Sbjct: 507 IDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRM-NKSNVESN 565
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG----NALVNMYAKCGLISCSY 358
D TF ++L+ C+ V HG + MR++ + +V + + G ++ +
Sbjct: 566 DITFVALLSVCSSTGLVNHGLSL---FDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDAL 622
Query: 359 KLFNEMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP-DSVTFI 408
+ ++ + + W ++++ H+ AL F K I+P D T++
Sbjct: 623 QFIGDIPSAPSAMVWRALLSSCIIHK--NVALGRFSAEKILEIEPQDETTYV 672
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 118/223 (52%), Gaps = 3/223 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+SS+L C+ L G +H +K+G + D+ V N +++ YAKC M + K+F +
Sbjct: 366 SLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL 425
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL--LP-NEYIFASAISACAGIQSLVKGQ 120
+ N VSW+ ++ G Q+G AL F +M +P + ++S + ACA S+
Sbjct: 426 RDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAG 485
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH K + + + +GNSLI Y K GY DAL V+ E +++S+NA+I+G+ +
Sbjct: 486 QIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHG 545
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMIL 223
Q E+F M + + + +F L +CS + + G+ L
Sbjct: 546 QAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSL 588
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 9/125 (7%)
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRM----RLNQDVGVGNALVNMYAKCGLISCS 357
D F A L C + G+ +H H++R RL D+ N L+NMY K G ++ +
Sbjct: 58 DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRL--DLFCANVLLNMYGKLGPLASA 115
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDS---VTFIGLLTAC 414
+LF+ M RN+VS+ T++ AHA +A LF +++ G + + T + L A
Sbjct: 116 RRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAM 175
Query: 415 NHAGL 419
+ AGL
Sbjct: 176 DAAGL 180
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 204/605 (33%), Positives = 327/605 (54%), Gaps = 40/605 (6%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYA--KCGKMILARKVFDEMSE 65
LL C + +Q +HA ++K G+ + + ++ A + G + A +F+ + E
Sbjct: 35 LLSKCQSIRTFKQ---IHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEE 91
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQI 122
NL W++MI G + LAL FF +M + PN Y F + +CA + S +G+QI
Sbjct: 92 PNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQI 151
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA--------------------- 161
HA+ LK G+ S F+ SLI+MY + G ++A LV+ ++
Sbjct: 152 HAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYM 211
Query: 162 ------FE----PNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
F+ ++VS+NA+IAG+ + + ++ +F+ M + + P+ + L C
Sbjct: 212 DRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSAC 271
Query: 212 SVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
+ SN L G + L SN + N ++ +YSK + A + F + E+D+ISWN
Sbjct: 272 AQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWN 331
Query: 272 TFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
I +H Y++ L++F+EM GV P + TF SIL +CA L ++ GK IHA++ +
Sbjct: 332 VMIGGYTHMCSYKEALALFREMLAS-GVEPTEITFLSILPSCAHLGAIDLGKWIHAYINK 390
Query: 332 MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
+ + +L+++YAKCG I + ++F+ M +++ SWN +I A H A +L
Sbjct: 391 NFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFEL 450
Query: 392 FEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLG 451
F +M + GI+P+ +TF+G+L+AC HAGLV G+ +F+SM + Y ISP +H+ C+IDLLG
Sbjct: 451 FSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLG 510
Query: 452 RAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVL 511
RAG EAE + + D + G+LL ACR V +GE +A++LF L+P YVL
Sbjct: 511 RAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVL 570
Query: 512 LSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYM 571
LSN+YA G W DVA R L D G+KK P + IEV +F V + H + +I M
Sbjct: 571 LSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRM 630
Query: 572 LKTLS 576
L+ +
Sbjct: 631 LEEVD 635
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 159/338 (47%), Gaps = 12/338 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I S+L C+++ AL G S+ + + G+ ++ + N ++++Y+KCG + AR++FD+M
Sbjct: 263 TIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDM 322
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
ER+++SW+ MI G+ + AL F +M + P E F S + +CA + ++ G+
Sbjct: 323 LERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGK 382
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IHAY K + + + SLI +Y K G A V+ +L S+NA+I G +
Sbjct: 383 WIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHG 442
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKG-MILHCLTVKCKLESNPFVG 239
Q +K FE+F M G+ P+ +F G L C + + G + K+
Sbjct: 443 QADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHY 502
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEK-DLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++ L + L EAE + +E K D W + + AC E G V + +
Sbjct: 503 GCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEP 562
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
P + S + A A GK IR RLN
Sbjct: 563 DNPGAYVLLSNIYAGA-------GKWDDVARIRTRLND 593
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 130/287 (45%), Gaps = 35/287 (12%)
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMAL--YSKFNLIGEAEKAFRLIEEK 265
L++ S +R +H +K L + F + ++ S+ I A F IEE
Sbjct: 33 LKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEP 92
Query: 266 DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
+L WN+ I S L F M GV P+ +TF +L +CA LAS GKQI
Sbjct: 93 NLFIWNSMIRGLSMSLSPALALVFFVRMIYS-GVEPNSYTFPFLLKSCAKLASAHEGKQI 151
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKC-------------------------------GLI 354
HAH++++ DV + +L+NMYA+ G +
Sbjct: 152 HAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYM 211
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ +LF+EM ++VVSWN +IA +A AL LFE M+ + P+ T + +L+AC
Sbjct: 212 DRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSAC 271
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ + G + + +E G+ +++ LID+ + G L A E
Sbjct: 272 AQSNALDLGNSMRSWIEDR-GLCSNLKLVNALIDMYSKCGDLQTARE 317
>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 190/556 (34%), Positives = 307/556 (55%), Gaps = 7/556 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L C+ +++G +H +V+K+G + DV V N +L+ Y CG + A +VFDEM E++
Sbjct: 47 VLKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKD 106
Query: 68 LVSWSAMISGHHQAGEHLL-ALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
LVSW+ MI G H AL+ F M L PN +S + ++ G+++H
Sbjct: 107 LVSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVH 166
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
S++ G S F+ NSLI MY K G+S++A V+ + N+VS+NA+IA F +N+
Sbjct: 167 GSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFEL 226
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ + M G LP+ +F L C+ +R G +H ++ + FV N +
Sbjct: 227 VAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALT 286
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K + A F +D +S+N I S +D + LS+F EM G++ D+
Sbjct: 287 DMYAKSGHLKLARNVFD-TSLRDEVSYNILIVGHSQTSDCSESLSLFSEMQL-MGLKQDN 344
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
+F L+ACA L +++ GK+IH L+R + + V N+L++ Y KCG I + +F+
Sbjct: 345 VSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDR 404
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M +++V SWNT+I + +A+ LFE M+ ++ DSV+FI +L+AC+H GL+++G
Sbjct: 405 MTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKG 464
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
YF+ + K GI P H+ C++DLLGRAG + EA E K P+ D + G LL ACR
Sbjct: 465 RKYFDEL-KARGIEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACR 523
Query: 484 LRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSY 543
+ ++ + A+ LF L+P + Y LLSN+YA G W + R+++K G+KK P
Sbjct: 524 IYGNLELAAWAAEHLFELKPEHSGYYTLLSNMYAETGRWDEANRIRELMKSRGVKKSPGC 583
Query: 544 SMIEVQGTFEKFTVAE 559
S +++ F V E
Sbjct: 584 SWVQIGEQAHAFVVGE 599
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 116/358 (32%), Positives = 198/358 (55%), Gaps = 7/358 (1%)
Query: 71 WSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSL 127
W+ +I G+ AG LE ++QM + P+++ F + ACA + KG+++H +
Sbjct: 10 WNTLIRGYSIAGVGG-GLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVV 68
Query: 128 KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF-VENQQPEKGF 186
K G+ S FVGN+L+S Y G DA V+ E E +LVS+N +I F V
Sbjct: 69 KLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDAL 128
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
++F+LM+ +GL P+ + + L + + G +H +++ LES+ F+ N+++ +Y
Sbjct: 129 DMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMY 188
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
+K EA F ++ K+++SWN IA + + + ++M D+G P+ TF
Sbjct: 189 AKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQM-QDYGELPNSVTF 247
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
++L ACA + V+ GK+IHA I M D+ V NAL +MYAK G + + +F+ L
Sbjct: 248 TNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDTSL- 306
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
R+ VS+N +I H+ +L LF +M+ G+K D+V+F+G L+AC + +K+G+
Sbjct: 307 RDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGK 364
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 152/273 (55%), Gaps = 3/273 (1%)
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
G EV+ M+R G+ PD +F L+ C+ + ++RKG +H VK ES+ FVGNT+++
Sbjct: 25 GLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLS 84
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS-HCADYEKGLSVFKEMSNDHGVRPDD 303
Y + +A + F + EKDL+SWNT I S + Y L +F+ M D G++P+
Sbjct: 85 FYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDALDMFRLMI-DEGLKPNS 143
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T +S L L + G+++H IRM L D+ + N+L++MYAK G + + +F +
Sbjct: 144 ITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYK 203
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
+ +NVVSWN +IA A +R A+ L QM+ G P+SVTF +L AC GLV+ G
Sbjct: 204 LDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPG 263
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+ ++ G + D+ L D+ ++G L
Sbjct: 264 KE-IHARSIHMGCAFDLFVSNALTDMYAKSGHL 295
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 98/191 (51%), Gaps = 4/191 (2%)
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
WNT I S A GL V+ +M GVRPDD TF +L ACA V+ G+++H +
Sbjct: 10 WNTLIRGYS-IAGVGGGLEVYNQMVR-IGVRPDDHTFPFVLKACADAFEVRKGREVHGSV 67
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA-NHRLGGSA 388
+++ DV VGN L++ Y CG + + ++F+EM +++VSWNT+I + N A
Sbjct: 68 VKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDA 127
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID 448
L +F M G+KP+S+T L K G S + G+ DI LID
Sbjct: 128 LDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRM-GLESDIFIANSLID 186
Query: 449 LLGRAGKLLEA 459
+ ++G EA
Sbjct: 187 MYAKSGHSTEA 197
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 179/563 (31%), Positives = 305/563 (54%), Gaps = 30/563 (5%)
Query: 43 VLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPN 99
++++Y KC ++ AR +FD+M ER+LV+W+ MI G+ + G+ +L F +M ++P+
Sbjct: 199 LVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPD 258
Query: 100 EYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG 159
+ + + ACA + ++ K + I Y + + +G ++I MY K G A ++
Sbjct: 259 KVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFD 318
Query: 160 EAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRK 219
E N++S++A+IA + + Q K ++F++ML G+LPD+ + A L C +L +
Sbjct: 319 RMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQ 378
Query: 220 GMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSH 279
+H + N V N ++ YS + + +A F + +D +SW+ + +
Sbjct: 379 VRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAK 438
Query: 280 CADYEKGLSVFKEM---------------------------SNDHGVRPDDFTFASILAA 312
DY F+E+ + GV PD +++ A
Sbjct: 439 VGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFA 498
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
CA L ++ + I ++ R + DV +G A+++M+AKCG + + ++F+ M +NV+SW
Sbjct: 499 CAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISW 558
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
+ +IAA+ H G AL LF M +GI P+ +T + LL AC+HAGLV+EG +F+ M +
Sbjct: 559 SAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWE 618
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGE 492
Y + D++H+TC++DLLGRAG+L EA + + + +D + G L ACR +DVV+ E
Sbjct: 619 DYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAE 678
Query: 493 RLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTF 552
+ A L LQP Y+LLSN+YA+ G W DVA R ++ LKK P ++ IEV
Sbjct: 679 KAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKS 738
Query: 553 EKFTVAEFSHSKIGEINYMLKTL 575
+F+V + +H + EI MLK+L
Sbjct: 739 HQFSVGDTTHPRSKEIYEMLKSL 761
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 113/477 (23%), Positives = 217/477 (45%), Gaps = 54/477 (11%)
Query: 16 KALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMI 75
+ L Q +HA G+ +++V+N ++ Y+ + A +FD M R+ VSWS M+
Sbjct: 92 RNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMV 151
Query: 76 SGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYA 132
G + G+++ F ++ P+ Y I AC +++L
Sbjct: 152 GGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNL---------------- 195
Query: 133 SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM 192
+L+ MY+K DA ++ + E +LV++ +I G+ E + + +F+ M
Sbjct: 196 -----QMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKM 250
Query: 193 LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI 252
+G++PD+ + + C+ + K I+ + K + + +G ++ +Y+K +
Sbjct: 251 REEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCV 310
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
A + F +EEK++ISW+ IAA + K L +F+ M + G+ PD T AS+L A
Sbjct: 311 ESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSS-GMLPDKITLASLLYA 369
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
C ++ +Q+HA + Q++ V N LV+ Y+ + +Y LF+ M R+ VSW
Sbjct: 370 CINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSW 429
Query: 373 NTIIAAHA-----------------------NHRL-----GGSALKLFEQMKATGIKPDS 404
+ ++ A N+ L +L LF++M+ G+ PD
Sbjct: 430 SVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDK 489
Query: 405 VTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
V + ++ AC G + + + +++ D+ T +ID+ + G + A E
Sbjct: 490 VAMVTVVFACAKLGAMHKARTIDDYIQRK-KFQLDVILGTAMIDMHAKCGCVESARE 545
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 156/325 (48%), Gaps = 27/325 (8%)
Query: 92 SQMHLLP--NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
S+ H L N + SA+ C ++L + +Q+HA + G V N LI Y
Sbjct: 71 SKFHFLQRLNPKFYISALVNC---RNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYR 127
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
DA ++ + VS++ ++ GF + F F+ ++R G PD ++ +
Sbjct: 128 ALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIR 187
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
C +L+ ++ +Y K I +A F ++E+DL++
Sbjct: 188 ACRDLKNLQMALV---------------------DMYVKCREIEDARFLFDKMQERDLVT 226
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
W I + C + L +F++M + GV PD +++ ACA L ++ + I ++
Sbjct: 227 WTVMIGGYAECGKANESLVLFEKM-REEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYI 285
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
R + DV +G A+++MYAKCG + + ++F+ M +NV+SW+ +IAA+ H G AL
Sbjct: 286 QRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKAL 345
Query: 390 KLFEQMKATGIKPDSVTFIGLLTAC 414
LF M ++G+ PD +T LL AC
Sbjct: 346 DLFRMMLSSGMLPDKITLASLLYAC 370
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 145/312 (46%), Gaps = 43/312 (13%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++SLL+ C + L Q +HA G+ ++IV+N +++ Y+ + A +FD M
Sbjct: 362 TLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGM 421
Query: 64 SERNLVSWSAMISGHHQAGEHL----------------------------LALEFFSQMH 95
R+ VSWS M+ G + G+++ +L F +M
Sbjct: 422 CVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMR 481
Query: 96 ---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSS 152
++P++ + + ACA + ++ K + I Y + + +G ++I M+ K G
Sbjct: 482 EEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVE 541
Query: 153 DALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
A ++ E N++S++A+IA + + Q K ++F +MLR G+LP++ + L CS
Sbjct: 542 SAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACS 601
Query: 213 VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA---EKAFRLIE----EK 265
+ + +G+ L + + V + +L+G A ++A +LIE EK
Sbjct: 602 HAGLVEEGLRFFSL-----MWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEK 656
Query: 266 DLISWNTFIAAC 277
D W F+ AC
Sbjct: 657 DEGLWGAFLGAC 668
>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
Length = 669
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 181/537 (33%), Positives = 307/537 (57%), Gaps = 6/537 (1%)
Query: 16 KALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMI 75
K G ++HA V ++G DV V + ++N Y + A KVF+EM ER++VSW++MI
Sbjct: 135 KWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMI 194
Query: 76 SGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYA 132
S Q G L+ S+M ++PN+ S +SAC Q++ +G+ ++ KFG
Sbjct: 195 SACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIE 254
Query: 133 SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM 192
+ + N+LISMY K G SDAL + S+N LI GFV+N + ++ +F+ M
Sbjct: 255 ADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEM 314
Query: 193 LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI 252
L G+ PD + L C+ +LRKGM +H + + + N+++ +Y+K +
Sbjct: 315 LLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDM 374
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
AE+ F+ + +KD++SW + + ++F+EM V + S+L+A
Sbjct: 375 AAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAE-VVAHEMALVSLLSA 433
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
C+ L ++ G++IH+++ M + +D+ + +ALV+MYAKCG I + ++F +M H+ +SW
Sbjct: 434 CSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSW 493
Query: 373 NTIIAAHANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
N +I A++ G A++LF+QM + KPD +T +L AC H G+V EG YF M
Sbjct: 494 NAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLM- 552
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
+ G+ PD EH+ C++DLLGRAG L EA + KK P+ +P++ G+LL+ACR+ + +G
Sbjct: 553 SSLGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLG 612
Query: 492 ERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEV 548
+ + + + ++ P +VL+SNL+A + W DV R ++ G++K P +S ++V
Sbjct: 613 KVIGQHIVNVAPNDVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEKTPGHSSVQV 669
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 231/452 (51%), Gaps = 11/452 (2%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCG---KMILARKVFDEMSERNLVSWSAMISGHHQ 80
LH +++ + D V+ ++ L A M ARKVFD M++ N W+ MI G+
Sbjct: 36 LHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYSS 95
Query: 81 AGEHLLALEFFSQMH---LLPNEYIFASAISACA---GIQSLVKGQQIHAYSLKFGYASI 134
AL F +M + P+ Y A+ +SA A G++ G IHA + G+ S
Sbjct: 96 CEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSD 155
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
FV + L++ Y +A V+ E +E ++VS+ ++I+ + +K ++ M
Sbjct: 156 VFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQA 215
Query: 195 QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGE 254
+G++P++ + L C + + +G ++ K +E++ + N ++++Y+K + +
Sbjct: 216 EGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSD 275
Query: 255 AEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA 314
A +AF+ + + SWNT I ++++ L +F+EM HGV PD T S+L+ACA
Sbjct: 276 ALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLL-HGVTPDGITLVSVLSACA 334
Query: 315 GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNT 374
L ++ G +H+++ + D + N+L+NMYAKCG ++ + ++F M ++VVSW
Sbjct: 335 QLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTV 394
Query: 375 IIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTY 434
++ + A LFE+MK + + + LL+AC+ G + +G + +E+
Sbjct: 395 MVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEM- 453
Query: 435 GISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
++ D+ + L+D+ + G + A E +K
Sbjct: 454 NVAKDLCLESALVDMYAKCGCIDTASEIFRKM 485
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 189/386 (48%), Gaps = 5/386 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I SLL C +T+A+ +G ++ V K GI+ DV + N ++++Y KCG + A + F M
Sbjct: 224 TIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAM 283
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
R SW+ +I G Q EH AL F +M L P+ S +SACA + L KG
Sbjct: 284 PARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGM 343
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H+Y G + + NSLI+MY K G + A V+ + ++VS+ ++ G+V+
Sbjct: 344 HVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGH 403
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
Q F +F+ M ++ + L CS L KG +H + + + + +
Sbjct: 404 QFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLES 463
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y+K I A + FR ++ K +SWN I + ++ + +F +M +
Sbjct: 464 ALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPK 523
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD T ++L ACA + V G + + + + D +V++ + G++ ++
Sbjct: 524 PDGITLKAVLGACAHVGMVDEGLRYFYLMSSLGVVPDTEHYGCIVDLLGRAGMLDEAFHF 583
Query: 361 FNEM-LHRNVVSWNTIIAA-HANHRL 384
+M + N V W +++AA +HR+
Sbjct: 584 IKKMPIEPNPVIWGSLLAACRVHHRM 609
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 136/275 (49%), Gaps = 11/275 (4%)
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK---FNLIGEA 255
P R L+ C+ L + LH V+ L S+ FV ++AL + + + A
Sbjct: 15 PIRHHLLAYLDACASRAHLAE---LHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYA 71
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA- 314
K F + + + WN I S C L+VF+EM GV PD++T A++++A A
Sbjct: 72 RKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRR-RGVSPDNYTMAAVVSASAA 130
Query: 315 --GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
GL +G IHA + R+ DV V + LVN Y + + K+F EM R+VVSW
Sbjct: 131 FAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSW 190
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
++I+A A LK+ +M+A GI P+ VT I LL+AC V EG +N + K
Sbjct: 191 TSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGK 250
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+GI D++ LI + + G L +A E + P
Sbjct: 251 -FGIEADVDIRNALISMYTKCGCLSDALEAFQAMP 284
>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
Length = 669
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 181/537 (33%), Positives = 307/537 (57%), Gaps = 6/537 (1%)
Query: 16 KALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMI 75
K G ++HA V ++G DV V + ++N Y + A KVF+EM ER++VSW++MI
Sbjct: 135 KWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMI 194
Query: 76 SGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYA 132
S Q G L+ S+M ++PN+ S +SAC Q++ +G+ ++ KFG
Sbjct: 195 SACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIE 254
Query: 133 SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM 192
+ + N+LISMY K G SDAL + S+N LI GFV+N + ++ +F+ M
Sbjct: 255 ADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEM 314
Query: 193 LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI 252
L G+ PD + L C+ +LRKGM +H + + + N+++ +Y+K +
Sbjct: 315 LLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDM 374
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
AE+ F+ + +KD++SW + + ++F+EM V + S+L+A
Sbjct: 375 AAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAE-VVAHEMALVSLLSA 433
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
C+ L ++ G++IH+++ M + +D+ + +ALV+MYAKCG I + ++F +M H+ +SW
Sbjct: 434 CSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSW 493
Query: 373 NTIIAAHANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
N +I A++ G A++LF+QM + KPD +T +L AC H G+V EG YF M
Sbjct: 494 NAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLM- 552
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
+ G+ PD EH+ C++DLLGRAG L EA + KK P+ +P++ G+LL+ACR+ + +G
Sbjct: 553 SSLGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLG 612
Query: 492 ERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEV 548
+ + + + ++ P +VL+SNL+A + W DV R ++ G++K P +S ++V
Sbjct: 613 KVIGQHIVNVAPNDVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEKTPGHSSVQV 669
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 231/452 (51%), Gaps = 11/452 (2%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCG---KMILARKVFDEMSERNLVSWSAMISGHHQ 80
LH +++ + D V+ ++ L A M ARKVFD M++ N W+ MI G+
Sbjct: 36 LHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYSS 95
Query: 81 AGEHLLALEFFSQMH---LLPNEYIFASAISACA---GIQSLVKGQQIHAYSLKFGYASI 134
AL F +M + P+ Y A+ +SA A G++ G IHA + G+ S
Sbjct: 96 CEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSD 155
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
FV + L++ Y +A V+ E +E ++VS+ ++I+ + +K ++ M
Sbjct: 156 VFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQA 215
Query: 195 QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGE 254
+G++P++ + L C + + +G ++ K +E++ + N ++++Y+K + +
Sbjct: 216 EGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSD 275
Query: 255 AEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA 314
A +AF+ + + SWNT I ++++ L +F+EM HGV PD T S+L+ACA
Sbjct: 276 ALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLL-HGVTPDGITLVSVLSACA 334
Query: 315 GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNT 374
L ++ G +H+++ + D + N+L+NMYAKCG ++ + ++F M ++VVSW
Sbjct: 335 QLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTV 394
Query: 375 IIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTY 434
++ + A LFE+MK + + + LL+AC+ G + +G + +E+
Sbjct: 395 MVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEM- 453
Query: 435 GISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
++ D+ + L+D+ + G + A E +K
Sbjct: 454 NVAKDLCLESALVDMYAKCGCIDTASEIFRKM 485
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 189/386 (48%), Gaps = 5/386 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I SLL C +T+A+ +G ++ V K GI+ DV + N ++++Y KCG + A + F M
Sbjct: 224 TIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAM 283
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
R SW+ +I G Q EH AL F +M L P+ S +SACA + L KG
Sbjct: 284 PARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGM 343
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H+Y G + + NSLI+MY K G + A V+ + ++VS+ ++ G+V+
Sbjct: 344 HVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGH 403
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
Q F +F+ M ++ + L CS L KG +H + + + + +
Sbjct: 404 QFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLES 463
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y+K I A + FR ++ K +SWN I + ++ + +F +M +
Sbjct: 464 ALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPK 523
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD T ++L ACA + V G + + + + D +V++ + G++ ++
Sbjct: 524 PDGITLKAVLGACAHVGMVDEGLRYFYLMSSLGVVPDTEHYGCIVDLLGRAGMLDEAFHF 583
Query: 361 FNEM-LHRNVVSWNTIIAA-HANHRL 384
+M + N V W +++AA +HR+
Sbjct: 584 IKKMPIEPNPVIWGSLLAACRVHHRM 609
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 136/275 (49%), Gaps = 11/275 (4%)
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK---FNLIGEA 255
P R L+ C+ L + LH V+ L S+ FV ++AL + + + A
Sbjct: 15 PIRHHLLAYLDACASRAHLAE---LHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYA 71
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA- 314
K F + + + WN I S C L+VF+EM GV PD++T A++++A A
Sbjct: 72 RKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRR-RGVSPDNYTMAAVVSASAA 130
Query: 315 --GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
GL +G IHA + R+ DV V + LVN Y + + K+F EM R+VVSW
Sbjct: 131 FAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSW 190
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
++I+A A LK+ +M+A GI P+ VT I LL+AC V EG +N + K
Sbjct: 191 TSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGK 250
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+GI D++ LI + + G L +A E + P
Sbjct: 251 -FGIEADVDIRNALISMYTKCGCLSDALEAFQAMP 284
>gi|255544622|ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547280|gb|EEF48775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 597
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 185/544 (34%), Positives = 311/544 (57%), Gaps = 5/544 (0%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L C +T+ L+QG +H+ +++ G ++ +S ++ Y K G+ I ARKVFD M ERN
Sbjct: 43 ILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMPERN 102
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
+VSW+A ISG+ + G + AL FSQM + N++ + S + AC G++ L +G QIH
Sbjct: 103 VVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHG 162
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
K + FV ++L+ ++ K G DA ++ E ++VS+NA+I G+ +
Sbjct: 163 CIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDFNDD 222
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
F +F M+ +G+ PD F+ L+ S +N+L K +H + ++ S+ + +++
Sbjct: 223 SFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNGSLID 282
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSH-CADYEKGLSVFKEMSNDHGVRPDD 303
Y+K + A ++ + +KD+IS+ + + C+ + L +FK+M + + DD
Sbjct: 283 AYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIF-MEIDD 341
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
TF ++L CA +AS+ G+QIHA I+ + + DV GNALV+MYAK G I + + F E
Sbjct: 342 VTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAFYE 401
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M +NV+SW ++I + H G A+ L+++M+ G+KP+ +TF+ LL AC+H+GL EG
Sbjct: 402 MKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGLTGEG 461
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
FN+M Y I P EH++C+IDL R G+L EA K + + + G +L AC
Sbjct: 462 WECFNNMITKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGAILGACS 521
Query: 484 LRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSY 543
+ + +GE A L + P ++ YV+L+ +YA+ G W R +++ LKK P Y
Sbjct: 522 IYGHMSLGEVAATHLLRMDPENSANYVVLAGIYAASGSWDKACRMRNLMEYRSLKKIPGY 581
Query: 544 SMIE 547
S+I+
Sbjct: 582 SIIQ 585
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 192/378 (50%), Gaps = 7/378 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C+ + L++G+ +H + K ++ V + +++L++KCG M AR +F+ MSER
Sbjct: 143 SVLRACTGLRCLERGMQIHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSER 202
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
++VSW+A+I G+ + + F M + P+ + S + A + +L+K QIH
Sbjct: 203 DVVSWNAVIGGYAAQDFNDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIH 262
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN-QQP 182
++ G+ S + SLI Y K A +Y + +++SF A++ G+
Sbjct: 263 GIIIQLGFGSHIDLNGSLIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYS 322
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
+ ++FK M + D +F L +C+ L G +H L +K K + GN +
Sbjct: 323 REALDLFKDMQHIFMEIDDVTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVATGNAL 382
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y+K I +A +AF ++EK++ISW + I + ++++K+M + G++P+
Sbjct: 383 VDMYAKSGEIEDATRAFYEMKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYE-GLKPN 441
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLI-RMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D TF S+L AC+ G + ++I + + + +++++A+ G + +Y +
Sbjct: 442 DITFLSLLFACSHSGLTGEGWECFNNMITKYNILPRAEHYSCMIDLFARGGQLEEAYNMI 501
Query: 362 NEM-LHRNVVSWNTIIAA 378
+M + N W I+ A
Sbjct: 502 CKMNIKPNSSLWGAILGA 519
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 178/366 (48%), Gaps = 6/366 (1%)
Query: 102 IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA 161
++ + C + L +G IH++ ++ G+ S + LI Y+K G + +A V+
Sbjct: 39 LYMKILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRM 98
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
E N+VS+ A I+G+ +N + VF M R G+ ++F++ L C+ L +GM
Sbjct: 99 PERNVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGM 158
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
+H K + N FV + ++ L+SK + +A F + E+D++SWN I +
Sbjct: 159 QIHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQD 218
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
+ +F M + GV PD FT S+L A + ++ QIH +I++ + +
Sbjct: 219 FNDDSFRMFYSMMGE-GVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLN 277
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH-RLGGSALKLFEQMKATGI 400
+L++ YAK + + L+ ML ++V+S+ I+ +A AL LF+ M+ +
Sbjct: 278 GSLIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFM 337
Query: 401 KPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
+ D VTF +L C + G +++ Y S D+ L+D+ ++G E E
Sbjct: 338 EIDDVTFCTMLNVCADIASLSIGRQ-IHALAIKYKPSYDVATGNALVDMYAKSG---EIE 393
Query: 461 EYTKKF 466
+ T+ F
Sbjct: 394 DATRAF 399
>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
Length = 981
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 191/571 (33%), Positives = 313/571 (54%), Gaps = 5/571 (0%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++ SL+ C+ G +H+ L+ + V V N ++N+Y+ GK+ A +F
Sbjct: 246 ATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFW 305
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
MS R+L+SW+ MIS + Q AL+ Q+ + +PN F+SA+ AC+ +L+
Sbjct: 306 NMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALID 365
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ +HA L+ VGNSLI+MY K DA V+ ++VS+N LI G+
Sbjct: 366 GKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAV 425
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRK-GMILHCLTVKCKLESNPF 237
+ K +VF + G+ P+ + + SNDL G LH ++ S+ +
Sbjct: 426 LEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEY 485
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N+++ +Y+K + + F I K+++SWN IAA + E+ L +F +M +
Sbjct: 486 VANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQH-A 544
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G + D A L++CA LAS++ G Q+H ++ L+ D V NA ++MY KCG ++
Sbjct: 545 GNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMNEM 604
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++ + R WNT+I+ +A + A + F+QM A G KPD VTF+ LL+AC+HA
Sbjct: 605 LQMVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSACSHA 664
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV +G Y+NSM ++G+SP I+H C++DLLGR G+ EAE + ++ P+ + ++ +
Sbjct: 665 GLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFIEEMPVLPNDLIWRS 724
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LLS+ R +++ IG + AK+L L P S YVLLSNLYA++ W DV R +K +
Sbjct: 725 LLSSSRTHKNLEIGRKAAKKLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTINI 784
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
K P+ S ++++ F + + H +I
Sbjct: 785 NKRPACSWLKLKNEVSTFGIGDRGHKHAEKI 815
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/461 (28%), Positives = 231/461 (50%), Gaps = 6/461 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + ++++ C + G+ + + V+ G+Q V V+N ++ ++ G++ A K+FD
Sbjct: 145 ANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAEKLFD 204
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
M E + +S +AMIS + G FS M L P+ S +S CA
Sbjct: 205 RMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSH 264
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G IH+ L+ S V N+L++MY G SDA ++ +L+S+N +I+ +V+
Sbjct: 265 GSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQ 324
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N + + +P+ +F+ L CS L G ++H + ++ L+ N V
Sbjct: 325 NCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLV 384
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
GN+++ +Y K N + +AEK F+ + D++S+N I + D K + VF + + G
Sbjct: 385 GNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRS-AG 443
Query: 299 VRPDDFTFASILAACAGLASV-QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
++P+ T +I + + +G+ +HA++IR D V N+L+ MYAKCG + S
Sbjct: 444 IKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESS 503
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+FN + ++N+VSWN IIAA+A G ALKLF M+ G K D V L++C
Sbjct: 504 TNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASL 563
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLE 458
++EG + + G+ D +D+ G+ GK+ E
Sbjct: 564 ASLEEG-MQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMNE 603
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 144/519 (27%), Positives = 258/519 (49%), Gaps = 41/519 (7%)
Query: 4 SISSLLHHCSK---TKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
+++SL+ C + + + G ++HA + G+ +V + +L+LY G + AR++F
Sbjct: 43 ALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLF 102
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL--LP-NEYIFASAISACAGIQSLV 117
EM ERN+VSW+A++ G L + QM +P N FA+ +S C +++ V
Sbjct: 103 WEMPERNVVSWTALMVALSSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEV 162
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G Q+ ++ + G + V NSLI+M+ +G DA ++ E + +S NA+I+ +
Sbjct: 163 PGLQVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYS 222
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
K F VF M GL PD + + +C+ ++ G +H L ++ L+S+
Sbjct: 223 HQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVT 282
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N ++ +YS + +AE F + +DLISWNT I++ + L ++ + +
Sbjct: 283 VINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTN 342
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
+ P+ TF+S L AC+ ++ GK +HA ++++ L +++ VGN+L+ MY KC + +
Sbjct: 343 EI-PNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDA 401
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI---GLLTAC 414
K+F M +VVS+N +I +A G A+++F +++ GIKP+ +T I G T+
Sbjct: 402 EKVFQSMPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSS 461
Query: 415 N---------HAGLVKEG----EAYFNSMEKTYGISPDIEHFTCLID------------L 449
N HA +++ G E NS+ Y ++E T + + +
Sbjct: 462 NDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAI 521
Query: 450 LGRAGKLLEAEEYTKKFPLGQ------DPIVLGTLLSAC 482
+ +L EE K F Q D + L LS+C
Sbjct: 522 IAANAQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSC 560
>gi|297829948|ref|XP_002882856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328696|gb|EFH59115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 753
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 190/581 (32%), Positives = 322/581 (55%), Gaps = 16/581 (2%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
L C + L G LH V+ G+ V + N ++++Y+KCGK+ A +FD +ER+
Sbjct: 156 LGFCGERCDLDFGKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQ 215
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA-----GIQSLVKGQ 120
VSW+++ISG+ + G L ++MH L Y S + AC G+ + KG
Sbjct: 216 VSWNSLISGYVRVGAAEEPLNLLAKMHRAGLKLTTYALGSVLKACCINLNEGL--MEKGM 273
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE-- 178
IH Y+ K G V +L+ MY K G +A+ ++ N+V++NA+I+GF++
Sbjct: 274 AIHCYAAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQMD 333
Query: 179 ---NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
++ + F++F M R+GL P +F+ L+ CS + L G +H L K +S+
Sbjct: 334 DITDEASSEAFKLFMEMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSD 393
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
F+G+ ++ LY+ + + F ++D+ SW + I E +F+++ +
Sbjct: 394 EFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSIIDCHVQNEQLESAFDLFRQLFS 453
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
+RP+++T + +++ACA A++ G+QI + I+ ++ V + ++MYAK G +
Sbjct: 454 S-PIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAYTSVKTSSISMYAKSGNMP 512
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ K+F E+ + +V +++ +I++ A H AL +FE MK GIKP+ F+G+L AC
Sbjct: 513 LANKVFIEVQNPDVATYSAMISSLAQHGSAHDALNIFESMKTRGIKPNQQAFLGVLIACC 572
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
H GLV G YF +M+ +YGI+P+ +HFTCL DLLGR G+L +AE P++
Sbjct: 573 HGGLVTHGVNYFQTMKNSYGINPNEKHFTCLADLLGRTGRLSDAENLILSSGFQDHPVMW 632
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
LLS+CR+ +D VIG+R+A++L L+P + YVLL N+Y G+ R++++D
Sbjct: 633 RALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDR 692
Query: 536 GLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
G+KKEP+ S I + F VA++SH I ML T++
Sbjct: 693 GVKKEPALSWIVLGNQTHSFAVADWSHPSSQMIYTMLDTMN 733
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 133/488 (27%), Positives = 245/488 (50%), Gaps = 24/488 (4%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+++ L +K+ +L G H ++K + P + + N++LN+Y KC ++ AR++FD
Sbjct: 48 SEAYKKLFQTAAKSGSLVLGKLAHGHMVKSSLNPCLYLLNNLLNMYCKCRELGFARQLFD 107
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
M ERN++S++++ISG+ Q G + A+E F + +L +++ +A A+ C L
Sbjct: 108 RMPERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGERCDLDF 167
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ +H + G + F+ N LI MY K G A+ ++ E + VS+N+LI+G+V
Sbjct: 168 GKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSLISGYVR 227
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSND---LRKGMILHCLTVKCKLESN 235
E+ + M R GL ++ L+ C ++ + + KGM +HC K +E +
Sbjct: 228 VGAAEEPLNLLAKMHRAGLKLTTYALGSVLKACCINLNEGLMEKGMAIHCYAAKLGMEFD 287
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY-----EKGLSVF 290
V ++ +Y+K + EA K F L+ K+++++N I+ D + +F
Sbjct: 288 IVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQMDDITDEASSEAFKLF 347
Query: 291 KEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
EM G+ P TF+ +L AC+ ++++G+QIHA + + D +G+AL+ +YA
Sbjct: 348 MEMQR-RGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYAL 406
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGL 410
G + F +++ SW +II H + SA LF Q+ ++ I+P+ T +
Sbjct: 407 MGSTEDGMQCFASTSKQDIASWTSIIDCHVQNEQLESAFDLFRQLFSSPIRPEEYTVSLM 466
Query: 411 LTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCL----IDLLGRAGKLLEAEEYTKKF 466
++AC + GE + Y I I+ +T + I + ++G + A K F
Sbjct: 467 MSACADFAALSSGEQI-----QGYAIKSGIDAYTSVKTSSISMYAKSGNMPLA---NKVF 518
Query: 467 PLGQDPIV 474
Q+P V
Sbjct: 519 IEVQNPDV 526
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 1/158 (0%)
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D + + A S+ GK H H+++ LN + + N L+NMY KC + + +LF
Sbjct: 47 DSEAYKKLFQTAAKSGSLVLGKLAHGHMVKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 106
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ M RN++S+N++I+ + A++LF + + +K D T+ G L C +
Sbjct: 107 DRMPERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGERCDLD 166
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
G+ + + G+S + LID+ + GKL +A
Sbjct: 167 FGK-LLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQA 203
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++S ++ C+ AL G + +K GI V +++YAK G M LA KVF E+
Sbjct: 462 TVSLMMSACADFAALSSGEQIQGYAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIEV 521
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISAC 110
++ ++SAMIS Q G AL F M + PN+ F + AC
Sbjct: 522 QNPDVATYSAMISSLAQHGSAHDALNIFESMKTRGIKPNQQAFLGVLIAC 571
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 207/609 (33%), Positives = 317/609 (52%), Gaps = 59/609 (9%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLN-------LYAKCGKMILARKV 59
SLLH+C K LQ +HA ++K G+ +N+ L+ L + A V
Sbjct: 7 SLLHNC---KTLQSLRIIHAKMIKTGLHN----TNYALSKLIEFSVLSPHFDGLTYAISV 59
Query: 60 FDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSL 116
FD + E NL+ W+ M GH + + + AL + M L+PN Y F + ACA ++
Sbjct: 60 FDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAF 119
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSF------- 169
+GQQIH + LK G +V SLI+MY+K G DA V+ ++ ++VS+
Sbjct: 120 REGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGY 179
Query: 170 ------------------------NALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA 205
NALI+G+ E ++ E+FK M++ + PD +
Sbjct: 180 ASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMV 239
Query: 206 GGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK 265
L C+ S + G +H SN + N ++ LY K + A F + K
Sbjct: 240 TVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYK 299
Query: 266 DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
D+ISWNT I +H Y++ L +F+EM G P++ T SIL ACA L ++ G+ I
Sbjct: 300 DVISWNTLIGGYTHMNLYKEALLLFQEMLRS-GESPNEVTMLSILPACAHLGAIDIGRWI 358
Query: 326 HAHLIRMRLNQDVGVGN------ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
H + I RL GV N +L++MYAKCG I + ++F+ ML+R++ SWN +I
Sbjct: 359 HVY-IDKRLK---GVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGF 414
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
A H A +F +M+ GI+PD +TF+GLL+AC+H+G++ G F SM + Y I+P
Sbjct: 415 AMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPK 474
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLF 499
+EH+ C+IDLLG +G EAEE + D ++ +LL AC++ +V +GE A+ L
Sbjct: 475 LEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLI 534
Query: 500 HLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAE 559
++P + YVLLSN+YA+ G W +VA R +L D G+KK P S IE+ +F + +
Sbjct: 535 KIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 594
Query: 560 FSHSKIGEI 568
H + EI
Sbjct: 595 KLHPRNREI 603
>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
Length = 749
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 188/579 (32%), Positives = 324/579 (55%), Gaps = 6/579 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S + C++ + G +HA LK D+IV N ++ +Y+K G + +F+ +
Sbjct: 137 ALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERI 196
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISACAGIQSLVKG 119
+++L+SW ++I+G Q G + AL+ F +M + PNE+ F SA AC + S G
Sbjct: 197 KDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYG 256
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+QIH S+K+ +VG SL MY + A + + P+LVS+N+++ +
Sbjct: 257 EQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVE 316
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ +F M GL PD + G L C + L G ++H VK L+ + V
Sbjct: 317 GLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVC 376
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N+++++Y++ + + A F I+++D+++WN+ + AC+ E+ L +F + N
Sbjct: 377 NSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFS-LLNKSEP 435
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
D + ++L+A A L + KQ+HA+ + L D + N L++ YAKCG + + +
Sbjct: 436 SLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMR 495
Query: 360 LFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
LF M +R+V SW+++I +A A LF +M++ GI+P+ VTFIG+LTAC+ G
Sbjct: 496 LFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVG 555
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
V EG Y++ ME YGI P EH +C++DLL RAGKL EA + + P D I+ TL
Sbjct: 556 FVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTL 615
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L+A ++ D+ +G+R A+ + ++ P+ ++ YVLL N+YA+ G W + A +K ++ SG+K
Sbjct: 616 LAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVK 675
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
K P S ++++G + F V + SH + EI ML+ + +
Sbjct: 676 KSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLELIGM 714
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 141/469 (30%), Positives = 241/469 (51%), Gaps = 38/469 (8%)
Query: 6 SSLLHHCSKTKALQQGISLHA-AVLKMGIQPD------VIVSNHVLNLYAKCGKMILARK 58
++L+ CS+ ++L QG +H V PD ++ NH++ +Y
Sbjct: 48 AALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYG---------- 97
Query: 59 VFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQS 115
RN VSW+++I+ H Q G AL FS M +++ SA+ AC +
Sbjct: 98 -------RNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGD 150
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
+ G+Q+HA++LK S V N+L++MY K G D +++ + +L+S+ ++IAG
Sbjct: 151 VGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAG 210
Query: 176 FVENQQPEKGFEVFKLMLRQGL-LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
F + + +VF+ M+ +G P+ F F C G +H L++K +L+
Sbjct: 211 FAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDR 270
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
+ +VG ++ +Y++ + A AF IE DL+SWN+ + A S + L +F EM
Sbjct: 271 DLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM- 329
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
D G+RPD T +L AC G ++ HG+ IH++L+++ L+ DV V N+L++MYA+C +
Sbjct: 330 RDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDL 389
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
S + +F+E+ ++VV+WN+I+ A A H LKLF + + D ++ +L+A
Sbjct: 390 SSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSAS 449
Query: 415 NHAG---LVKEGEAY-FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
G +VK+ AY F + G+ D LID + G L +A
Sbjct: 450 AELGYFEMVKQVHAYAFKA-----GLVDDRMLSNTLIDTYAKCGSLDDA 493
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 197/387 (50%), Gaps = 26/387 (6%)
Query: 103 FASAISACAGIQSLVKGQQIHAY-------SLKFGYASISFVGNSLISMYMKVGYSSDAL 155
+A+ +SAC+ ++SL +G+++H + S A + +GN LI+MY +
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGR-------- 98
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN 215
N VS+ ++IA V+N + +F MLR G D+F+ + C+
Sbjct: 99 ---------NPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 149
Query: 216 DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIA 275
D+ G +H +K + S+ V N ++ +YSK L+ + F I++KDLISW + IA
Sbjct: 150 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 209
Query: 276 ACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN 335
+ + L VF+EM + P++F F S AC + S ++G+QIH I+ RL+
Sbjct: 210 GFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 269
Query: 336 QDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM 395
+D+ VG +L +MYA+C + + F + ++VSWN+I+ A++ L AL LF +M
Sbjct: 270 RDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM 329
Query: 396 KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGK 455
+ +G++PD +T GLL AC + G + + K G+ D+ L+ + R
Sbjct: 330 RDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKL-GLDGDVSVCNSLLSMYARCSD 388
Query: 456 LLEAEEYTKKFPLGQDPIVLGTLLSAC 482
L A + + QD + ++L+AC
Sbjct: 389 LSSAMDVFHEIK-DQDVVTWNSILTAC 414
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 195/561 (34%), Positives = 319/561 (56%), Gaps = 25/561 (4%)
Query: 28 VLKMGIQ-PDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLL 86
VLK G DV V +++++A+ G ++ A++VFD + ER V W+ +I+ + QAG
Sbjct: 170 VLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASK 229
Query: 87 ALEFFSQMHLL-----PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSL 141
+E F +H+L P+ Y +S ISAC + S+ GQQ+H+ +L+ G S S V L
Sbjct: 230 VVELF--LHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGL 287
Query: 142 ISMYMKVGYSSD---ALLVYGEAFEPNLVSFNALIAGFVENQQPEKG-FEVFKLMLRQGL 197
+ MY K+ A V+ N++S+ ALI+G+V++ E +F+ ML + +
Sbjct: 288 VDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESI 347
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
P+ +++ L+ C+ +D G +H +K + VGN ++++Y++ + EA K
Sbjct: 348 RPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARK 407
Query: 258 AFRLIEEKDLISWNTFIAA---CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA 314
AF + E +++S + + + C+ +G+ D GV FTFAS+L+A A
Sbjct: 408 AFDQLYETNILSMSPDVETERNNASCSSKIEGM--------DDGVST--FTFASLLSAAA 457
Query: 315 GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNT 374
+ + G+++HA ++ D G+ N+LV+MYA+CG + + + F+EM NV+SW +
Sbjct: 458 SVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTS 517
Query: 375 IIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTY 434
II+ A H AL +F M G+KP+ VT+I +L+AC+H GLVKEG+ +F SM+K +
Sbjct: 518 IISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDH 577
Query: 435 GISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERL 494
G+ P +EH+ C++DLL R+G + EA ++ + P D +V TLLSACR + IGE
Sbjct: 578 GLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIA 637
Query: 495 AKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEK 554
A + +L+P +PYVLLSNLYA G+W +VA R +++D L KE S ++V T +
Sbjct: 638 ANHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLSKETGLSWMDVGNTIHE 697
Query: 555 FTVAEFSHSKIGEINYMLKTL 575
F + SH +I L TL
Sbjct: 698 FRAGDTSHPLAIDIYAKLVTL 718
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/466 (28%), Positives = 233/466 (50%), Gaps = 21/466 (4%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGI-QPDVIVSNHVLNLYAKCGKMILARKVFDEM- 63
+ LL ++ L+ G +LH +L+ I D +V+N +L +Y+KCG + AR+VFD+M
Sbjct: 44 AKLLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMC 103
Query: 64 SERNLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVK-- 118
R+LVSW+AM S + G E L L ++ L PN + +A AC Q L +
Sbjct: 104 GVRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFP-QELFRLA 162
Query: 119 GQQIHAYSLKFGYASISF-VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G + + LK G+ VG +LI M+ + G A V+ E V + LI +V
Sbjct: 163 GGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYV 222
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ K E+F ML G PD +S + + C+ +R G LH + ++ L S+
Sbjct: 223 QAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSC 282
Query: 238 VGNTIMALYSKFNL---IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKG-LSVFKEM 293
V ++ +Y+K + + A K F+ + +++SW I+ E +++F+EM
Sbjct: 283 VSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREM 342
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
N+ +RP+ T++++L ACA L+ G+QIHAH+++ + VGNALV+MYA+ G
Sbjct: 343 LNE-SIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGC 401
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ + K F+++ N++S + + N+ S ++ + +T TF LL+A
Sbjct: 402 MEEARKAFDQLYETNILSMSPDVETERNNASCSSKIEGMDDGVST------FTFASLLSA 455
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
GL+ +G+ +++ G D L+ + R G L +A
Sbjct: 456 AASVGLLTKGQK-LHALSMKAGFRSDQGISNSLVSMYARCGYLEDA 500
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 213/392 (54%), Gaps = 32/392 (8%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCG---KMILARKVF 60
S+SS++ C++ +++ G LH+ L++G+ D VS ++++YAK M ARKVF
Sbjct: 248 SMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVF 307
Query: 61 DEMSERNLVSWSAMISGHHQAG---EHLLALEFFSQM---HLLPNEYIFASAISACAGIQ 114
M N++SW+A+ISG+ Q+G +++AL F +M + PN +++ + ACA +
Sbjct: 308 KTMPRHNVMSWTALISGYVQSGVQENNVMAL--FREMLNESIRPNHITYSNLLKACANLS 365
Query: 115 SLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIA 174
G+QIHA+ LK A ++ VGN+L+SMY + G +A + + +E N++S + +
Sbjct: 366 DQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVE 425
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
N E + G+ F+FA L + L KG LH L++K S
Sbjct: 426 TERNNASCSSKIE----GMDDGV--STFTFASLLSAAASVGLLTKGQKLHALSMKAGFRS 479
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
+ + N+++++Y++ + +A +AF +++ ++ISW + I+ + ++ LS+F +M
Sbjct: 480 DQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMI 539
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQ-------IHAHLIRMRLNQDVGVGNALVNM 347
GV+P+D T+ ++L+AC+ + V+ GK+ H L RM +V++
Sbjct: 540 L-AGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYA------CIVDL 592
Query: 348 YAKCGLISCSYKLFNEMLHR-NVVSWNTIIAA 378
A+ GL+ + + NEM + + + W T+++A
Sbjct: 593 LARSGLVEEARQFINEMPCKADALVWKTLLSA 624
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 154/314 (49%), Gaps = 7/314 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S+LL C+ G +HA VLK I +V N ++++YA+ G M ARK FD++ E
Sbjct: 355 SNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYE 414
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAY 125
N++S S + +E M + + FAS +SA A + L KGQ++HA
Sbjct: 415 TNILSMSPDVETERNNASCSSKIE---GMDDGVSTFTFASLLSAAASVGLLTKGQKLHAL 471
Query: 126 SLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKG 185
S+K G+ S + NSL+SMY + GY DA + E + N++S+ ++I+G ++ ++
Sbjct: 472 SMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQA 531
Query: 186 FEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN--TIM 243
+F M+ G+ P+ ++ L CS +++G H +++ P + + I+
Sbjct: 532 LSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGK-EHFRSMQKDHGLLPRMEHYACIV 590
Query: 244 ALYSKFNLIGEAEKAFRLIEEK-DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
L ++ L+ EA + + K D + W T ++AC + E G + N P
Sbjct: 591 DLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAANHVINLEPRDPA 650
Query: 303 DFTFASILAACAGL 316
+ S L A AGL
Sbjct: 651 PYVLLSNLYADAGL 664
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 181/557 (32%), Positives = 313/557 (56%), Gaps = 4/557 (0%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+H+ K+G + V + +++ Y+ C + A VF+ + ++ V W+AM+S + +
Sbjct: 184 VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDC 243
Query: 84 HLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
A FS+M + PN + S + A + S+V G+ IH ++K + VG +
Sbjct: 244 PENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGA 303
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
L+ MY K G DA L + +++ + +I+ + ++ Q E+ FE+F ++R +LP+
Sbjct: 304 LLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPN 363
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+S + L+ C+ L G +H +K ES+ FVGN +M Y+K N + + K F
Sbjct: 364 EYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFS 423
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ + + +SWNT + S E+ LSVF EM + T++S+L ACA AS++
Sbjct: 424 SLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQ-MPCTQVTYSSVLRACASTASIR 482
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
H QIH + + N D +GN+L++ YAKCG I + K+F ++ R+++SWN II+ +A
Sbjct: 483 HAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYA 542
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
H AL+LF++M + ++ + +TF+ LL+ C+ GLV G + F+SM +GI P +
Sbjct: 543 LHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSM 602
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH 500
EH+TC++ LLGRAG+L +A ++ P +V LLS+C + ++V +G A+++
Sbjct: 603 EHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILE 662
Query: 501 LQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEF 560
++P + YVLLSN+YA+ G VA RK +++ G++K P S +E++G F+V
Sbjct: 663 IEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSV 722
Query: 561 SHSKIGEINYMLKTLSL 577
H + IN ML+ L+L
Sbjct: 723 DHPDMRVINAMLEWLNL 739
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/458 (28%), Positives = 226/458 (49%), Gaps = 11/458 (2%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGI--QPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
L C + G ++H V++ G + D+ +N +LN+Y K G + AR++FD M ER
Sbjct: 66 LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPER 125
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIH 123
N+VS+ ++ H Q G+ A F ++ N+++ + + + + +H
Sbjct: 126 NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVH 185
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ + K G+ +FVG+ LI Y SDA V+ + V + A+++ + EN PE
Sbjct: 186 SCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPE 245
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLE--ICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
F VF M G P+ F+ L+ +C S L KG +H +K ++ P VG
Sbjct: 246 NAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKG--IHGCAIKTLNDTEPHVGGA 303
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y+K I +A AF +I D+I + I+ + E+ +F + V P
Sbjct: 304 LLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRS-SVLP 362
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
++++ +S+L AC + + GKQIH H I++ D+ VGNAL++ YAKC + S K+F
Sbjct: 363 NEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIF 422
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ + N VSWNTI+ + LG AL +F +M+A + VT+ +L AC ++
Sbjct: 423 SSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIR 482
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
S+EK+ + D LID + G + +A
Sbjct: 483 HAGQIHCSIEKS-TFNNDTVIGNSLIDTYAKCGYIRDA 519
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 200/414 (48%), Gaps = 24/414 (5%)
Query: 15 TKALQQGISLHAAVLKMGIQPDVI---------VSNHVLNLYAKCGKMILARKVFDEMSE 65
T L+ + L + VL GI I V +L++YAKCG + AR F+ +
Sbjct: 267 TSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPY 326
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQI 122
+++ S MIS + Q+ ++ A E F ++ +LPNEY +S + AC + L G+QI
Sbjct: 327 DDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQI 386
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H +++K G+ S FVGN+L+ Y K +L ++ + N VS+N ++ GF ++
Sbjct: 387 HNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLG 446
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E+ VF M + + +++ L C+ + +R +HC K ++ +GN++
Sbjct: 447 EEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSL 506
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ Y+K I +A K F+ + E+D+ISWN I+ + L +F M N V +
Sbjct: 507 IDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRM-NKSNVESN 565
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG----NALVNMYAKCGLISCSY 358
D TF ++L+ C+ V HG + MR++ + +V + + G ++ +
Sbjct: 566 DITFVALLSVCSSTGLVNHGLSL---FDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDAL 622
Query: 359 KLFNEMLH-RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP-DSVTFIGL 410
+ ++ + + W ++++ H+ AL F K I+P D T++ L
Sbjct: 623 QFIGDIPSAPSAMVWRALLSSCIIHK--NVALGRFSAEKILEIEPQDETTYVLL 674
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 118/223 (52%), Gaps = 3/223 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+SS+L C+ L G +H +K+G + D+ V N +++ YAKC M + K+F +
Sbjct: 366 SLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL 425
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL--LP-NEYIFASAISACAGIQSLVKGQ 120
+ N VSW+ ++ G Q+G AL F +M +P + ++S + ACA S+
Sbjct: 426 RDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAG 485
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH K + + + +GNSLI Y K GY DAL V+ E +++S+NA+I+G+ +
Sbjct: 486 QIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHG 545
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMIL 223
Q E+F M + + + +F L +CS + + G+ L
Sbjct: 546 QAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSL 588
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 9/125 (7%)
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRM----RLNQDVGVGNALVNMYAKCGLISCS 357
D F A L C + G+ +H H++R RL D+ N L+NMY K G ++ +
Sbjct: 58 DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRL--DLFCANVLLNMYGKLGPLASA 115
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDS---VTFIGLLTAC 414
+LF+ M RN+VS+ T++ AHA +A LF +++ G + + T + L A
Sbjct: 116 RRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAM 175
Query: 415 NHAGL 419
+ AGL
Sbjct: 176 DAAGL 180
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 189/582 (32%), Positives = 313/582 (53%), Gaps = 45/582 (7%)
Query: 32 GIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS-----ERNLVSWSAMISGHHQAGEHLL 86
G++PD + N +++ YA+ G+ A K F EM + N+VSW+A+I+G Q G
Sbjct: 286 GVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFE 345
Query: 87 ALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFG-YASISFVGNSLI 142
AL F +M L PN ASA+SAC + L G++IH Y +K S VGNSL+
Sbjct: 346 ALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLV 405
Query: 143 SMYMK--------------------------VGYS-----SDALLVYGE----AFEPNLV 167
Y K GY+ +A+ + E EP+++
Sbjct: 406 DYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDII 465
Query: 168 SFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLT 227
++N L+ GF + + E F+ M G+ P+ + +G L C +L+ G +H
Sbjct: 466 TWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYV 525
Query: 228 VKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGL 287
++ +E + VG+ ++++YS + + A F + +D++ WN+ I+AC+ L
Sbjct: 526 LRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNAL 585
Query: 288 SVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNM 347
+ +EM N V + T S L AC+ LA+++ GK+IH +IR L+ + N+L++M
Sbjct: 586 DLLREM-NLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDM 644
Query: 348 YAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTF 407
Y +CG I S ++F+ M R++VSWN +I+ + H G A+ LF+ + G+KP+ +TF
Sbjct: 645 YGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITF 704
Query: 408 IGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
LL+AC+H+GL++EG YF M+ Y + P +E + C++DLL RAG+ E E+ +K P
Sbjct: 705 TNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMP 764
Query: 468 LGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAG 527
+ V G+LL ACR+ + + E A+ LF L+P ++ YVL++N+Y++ G W D A
Sbjct: 765 FEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAK 824
Query: 528 ARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEIN 569
R ++K+ G+ K P S IEV+ F V + SH + +I+
Sbjct: 825 IRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQIS 866
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 241/497 (48%), Gaps = 75/497 (15%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
CS+ K + G ++ +L +G + + V +L+++ KCG+M +AR+ F+E+ +++ W
Sbjct: 200 CSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMW 259
Query: 72 SAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGY 131
+ M+SG+ GE AL+ S M L S VK Q+
Sbjct: 260 NIMVSGYTSKGEFKKALKCISDMKL------------------SGVKPDQV--------- 292
Query: 132 ASISFVGNSLISMYMKVGYSSDALLVYGEA-----FEPNLVSFNALIAGFVENQQPEKGF 186
N++IS Y + G +A + E F+PN+VS+ ALIAG +N +
Sbjct: 293 -----TWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEAL 347
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILH--CLTVKCKLESNPFVGNTIMA 244
VF+ M+ +G+ P+ + A + C+ + LR G +H C+ V+ +L+S+ VGN+++
Sbjct: 348 SVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE-ELDSDLLVGNSLVD 406
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS---------- 294
Y+K + A + F +I++ DL+SWN +A + +E+ + + EM
Sbjct: 407 YYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIIT 466
Query: 295 ------------------------NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
+ G+ P+ T + LAAC + +++ GK+IH +++
Sbjct: 467 WNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVL 526
Query: 331 RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALK 390
R + GVG+AL++MY+ C + + +F+E+ R+VV WN+II+A A +AL
Sbjct: 527 RNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALD 586
Query: 391 LFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLL 450
L +M + ++ ++VT + L AC+ +++G+ + + G+ LID+
Sbjct: 587 LLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRC-GLDTCNFILNSLIDMY 645
Query: 451 GRAGKLLEAEEYTKKFP 467
GR G + ++ P
Sbjct: 646 GRCGSIQKSRRIFDLMP 662
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 210/436 (48%), Gaps = 48/436 (11%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+I+S + C+ L+ G +H +K+ + D++V N +++ YAKC + +AR+ F
Sbjct: 364 TIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGM 423
Query: 63 MSERNLVSWSAMISGHHQAGEH-----LL------------------------------A 87
+ + +LVSW+AM++G+ G H LL A
Sbjct: 424 IKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAA 483
Query: 88 LEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISM 144
LEFF +MH + PN + A++AC +++L G++IH Y L+ + VG++LISM
Sbjct: 484 LEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISM 543
Query: 145 YMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSF 204
Y A V+ E ++V +N++I+ ++ + ++ + M + + +
Sbjct: 544 YSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTM 603
Query: 205 AGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE 264
L CS LR+G +H ++C L++ F+ N+++ +Y + I ++ + F L+ +
Sbjct: 604 VSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQ 663
Query: 265 KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ 324
+DL+SWN I+ +++F+ G++P+ TF ++L+AC+ ++ G +
Sbjct: 664 RDLVSWNVMISVYGMHGFGMDAVNLFQXFRT-MGLKPNHITFTNLLSACSHSGLIEEGWK 722
Query: 325 IHAHLIRMRLNQDVGVGN--ALVNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAA--- 378
+ +++ D V +V++ ++ G + + + +M N W +++ A
Sbjct: 723 -YFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRI 781
Query: 379 HANHRLGGSALK-LFE 393
H N L A + LFE
Sbjct: 782 HCNPDLAEYAARYLFE 797
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 142/282 (50%), Gaps = 4/282 (1%)
Query: 204 FAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIE 263
+A L+ C +LR G +H V ++ F+G+ ++ +Y + + +A + F +
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 264 EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGK 323
E+++ SW + DYE+ + +F M N+ GVRPD F F + AC+ L + + GK
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNE-GVRPDHFVFPKVFKACSELKNYRVGK 210
Query: 324 QIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR 383
++ +++ + + V ++++M+ KCG + + + F E+ ++V WN +++ + +
Sbjct: 211 DVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKG 270
Query: 384 LGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF 443
ALK MK +G+KPD VT+ +++ +G +E YF M P++ +
Sbjct: 271 EFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSW 330
Query: 444 TCLIDLLGRAGKLLEAEEYTKKFPL-GQDP--IVLGTLLSAC 482
T LI + G EA +K L G P I + + +SAC
Sbjct: 331 TALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSAC 372
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 164/378 (43%), Gaps = 44/378 (11%)
Query: 79 HQAGEHLLALEFFSQMHLL-PNE--YIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS 135
H+ G A S M L P+E I+AS + C + +L G Q+HA + G
Sbjct: 65 HRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCE 124
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
F+G+ L+ +Y + G DA ++ + E N+ S+ A++ + E+ ++F LM+ +
Sbjct: 125 FLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNE 184
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
G+ PD F F + CS + R G ++ + E N V +I+ ++ K + A
Sbjct: 185 GVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIA 244
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
+ F IE KD+ WN ++ + +++K L +M GV+PD T+
Sbjct: 245 RRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLS-GVKPDQVTW--------- 294
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM-----LHRNVV 370
NA+++ YA+ G + K F EM NVV
Sbjct: 295 --------------------------NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVV 328
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSM 430
SW +IA + AL +F +M G+KP+S+T ++AC + L++ G
Sbjct: 329 SWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYC 388
Query: 431 EKTYGISPDIEHFTCLID 448
K + D+ L+D
Sbjct: 389 IKVEELDSDLLVGNSLVD 406
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 187/573 (32%), Positives = 314/573 (54%), Gaps = 7/573 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+ CS+ +L+ G S+H V++ I+ + ++N ++ +Y K G + A ++F+ + R
Sbjct: 206 SVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCR 265
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
W+ MIS ++Q+G AL F++M + PN+ + ACA + + +G+ +H
Sbjct: 266 MTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVH 325
Query: 124 AYSLKFGY-ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
+ ++ + F+G +L+ +Y G D V+ E ++S+N LI+ F N QP
Sbjct: 326 GFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQP 385
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E+ +F M QGL+PD +S A L C + + G +H +K N FV N +
Sbjct: 386 EEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNAL 444
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y+K + A K F I+EK L++WN+ I S + +++F +M + V+ D
Sbjct: 445 IDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMN-CVKMD 503
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
TF S++ AC+ L ++ GK +H LI L +D + AL +MY+KCG + ++ +F+
Sbjct: 504 KLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFD 563
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
M R++VSW+ +IA + H + + LF QM +GIKP+ +TF+ +L+AC+HAG V+E
Sbjct: 564 RMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEE 623
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G+ YFNSM + +G+ P +HF C++DLL RAG L A + P + + G LL+ C
Sbjct: 624 GKLYFNSMSE-FGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGC 682
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
R+ + + I + + K L + T Y LLSN+YA +G W R M+K GL+K P
Sbjct: 683 RIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPG 742
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
YS IE+ +F + SHS+ +I L+
Sbjct: 743 YSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENF 775
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 134/457 (29%), Positives = 242/457 (52%), Gaps = 13/457 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L CS L G +H V+K G + D +V +L +Y + + A K FD M R
Sbjct: 105 SVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIR 164
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
++V+WS+++ Q G+ L+ FSQM + P+ S AC+ + SL G+ +H
Sbjct: 165 DVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVH 224
Query: 124 AYSLKFGYASISFVGNSLISMYMKVG--YSSDALLVYGEAFEPNLVS-FNALIAGFVENQ 180
Y ++ S + + NSLI MY K+G YS++ L E + + + +I+ + ++
Sbjct: 225 GYVVRREIESNASLNNSLIVMYGKLGDLYSAERLF---ENVPCRMTAPWTPMISCYNQSG 281
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN-PFVG 239
++ VF M + P++ + G L C+ +++G +H ++ ++ F+G
Sbjct: 282 CFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLG 341
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+M LY+ + + K F I+EK ++SWNT I+ + E+ L +F +M G+
Sbjct: 342 PALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQT-QGL 400
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
PD ++ AS L+AC ++ Q G QIH ++I+ D V NAL++MYAKCG + + K
Sbjct: 401 MPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDF-VQNALIDMYAKCGFVHSANK 459
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F ++ +++V+WN++I + + A+ LF+QM +K D +TF+ ++ AC+H G
Sbjct: 460 MFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGY 519
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+++G+ + + YG+ D T L D+ + G+L
Sbjct: 520 LEKGKWVHHKL-IMYGLRKDSYLDTALTDMYSKCGEL 555
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 226/463 (48%), Gaps = 11/463 (2%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
L C+ + L Q LHA + G+ S ++ YA+ G +++VFD + +
Sbjct: 7 LFRRCATSTTLTQ---LHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPD 63
Query: 68 LVSWSAMISGHHQAG--EHLLAL--EFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
W +I + G E ++L E Q + ++F S + AC+G L G ++H
Sbjct: 64 SFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVH 123
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+K G+ S + V SL+ MY ++ DA + ++V++++++ FV+N Q
Sbjct: 124 GRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQAS 183
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+G ++F M+ + + PD + E CS LR G +H V+ ++ESN + N+++
Sbjct: 184 EGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLI 243
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y K + AE+ F + + W I+ + +++ L+VF +M + + P+
Sbjct: 244 VMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKM-QEFKMEPNQ 302
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG-VGNALVNMYAKCGLISCSYKLFN 362
T +L ACA L V+ G+ +H +IR ++ ++ +G AL+ +YA G + +K+F
Sbjct: 303 VTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFE 362
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+ + ++SWNT+I+ + AL LF QM+ G+ PDS + L+AC +
Sbjct: 363 TIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQL 422
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKK 465
G + KT + +++ LID+ + G + A + +K
Sbjct: 423 GAQIHGYIIKTGNFNDFVQN--ALIDMYAKCGFVHSANKMFEK 463
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 183/575 (31%), Positives = 313/575 (54%), Gaps = 4/575 (0%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C + LQ G + ++ + + D+ V ++ +YA+C A +VF M +
Sbjct: 266 SILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQT 325
Query: 67 NLVSWSAMISG---HHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
NL++WSA+I+ H GE L Q +LPN F S ++ L + +IH
Sbjct: 326 NLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIH 385
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ G + + N+L+++Y + DA V+ + PNL+S+N++I +V+ ++ +
Sbjct: 386 LLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHD 445
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
++F+ M +QG+ PDR +F L C++ + R ++H + L +P V +++
Sbjct: 446 DALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLV 505
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K + AE + ++E+ + +WN I + + L ++++ + + D
Sbjct: 506 NMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLE-AIPVDK 564
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
TF S+L AC S+ GK IH++ + L+ DV V NAL NMY+KCG + + ++F+
Sbjct: 565 VTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDS 624
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M R+ VSWN ++ A+A H LKL +M+ G+K + +TF+ +L++C+HAGL+ EG
Sbjct: 625 MPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEG 684
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
YF+S+ GI EH+ CL+DLLGRAGKL EAE+Y K PL + +LL ACR
Sbjct: 685 CQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGACR 744
Query: 484 LRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSY 543
+++D+ G+ A +L L P +S V+LSN+Y+ G W + A R+ + +KK P
Sbjct: 745 VQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGI 804
Query: 544 SMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSLA 578
S I+V+ +F V + SH + EI ++ L A
Sbjct: 805 SSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFA 839
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 230/466 (49%), Gaps = 7/466 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
++L+ AL++G +H+ V + DV V+ ++N Y KCG + ARKVFD M R
Sbjct: 165 NVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCR 224
Query: 67 NLVSWSAMISGH---HQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
++ +W++MIS + ++GE + Q + F S + AC ++L G+ +
Sbjct: 225 SVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVR 284
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ + FVG +LI+MY + DA V+G + NL++++A+I F ++
Sbjct: 285 ESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCG 344
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ F++M ++G+LP+R +F L + + L + +H L + L+ + N ++
Sbjct: 345 EALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALV 404
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y + +A F +E +LISWN+ I C ++ L +F+ M G++PD
Sbjct: 405 NVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQ-QGIQPDR 463
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
F +IL AC + + K +H + L V +LVNMYAK G + + + E
Sbjct: 464 VNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQE 523
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M + + +WN +I +A H AL+ +++++ I D VTFI +L AC + + EG
Sbjct: 524 MDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEG 583
Query: 424 EA-YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
+ + N++E G+ D+ L ++ + G + A P+
Sbjct: 584 KMIHSNAVE--CGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPI 627
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 249/467 (53%), Gaps = 14/467 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++ ++L+ C + L+ GI +HA L+ G + +V+ +LN+Y KCG ++ A+ VF+
Sbjct: 58 AITLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFE 117
Query: 62 EMSERNLVSWSAMISGHH-QAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLV 117
EM+E+N+V+W+AM+ + Q LA+E F++M L N F + +++ +L
Sbjct: 118 EMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALR 177
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
KG+ IH+ + ++ FV +L++ Y K G +DA V+ ++ ++N++I+ +
Sbjct: 178 KGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYS 237
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+++ + F +F+ M ++G DR +F L+ C L+ G + + E + F
Sbjct: 238 ISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLF 297
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS---HCADYEKGLSVFKEMS 294
VG ++ +Y++ +A + F +++ +LI+W+ I A + HC + L F+ M
Sbjct: 298 VGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGE---ALRYFRMMQ 354
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
+ G+ P+ TF S+L + ++ +IH + L+ + NALVN+Y +C
Sbjct: 355 QE-GILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESP 413
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ +F+++ N++SWN++I + AL+LF M+ GI+PD V F+ +L AC
Sbjct: 414 DDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGAC 473
Query: 415 NHAGLVKEGEAYFNSMEKT-YGISPDIEHFTCLIDLLGRAGKLLEAE 460
+ + +E++ G SP ++ T L+++ +AG+L AE
Sbjct: 474 TIGSHGRTRKLVHQCVEESGLGGSPLVQ--TSLVNMYAKAGELDVAE 518
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 189/370 (51%), Gaps = 5/370 (1%)
Query: 46 LYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYI 102
+Y++CG + A F ++ RN+VSW+ MIS + AL F M L PN
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+ +++C + L G +HA SL+ G+ + V +L++MY K G DA V+ E
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120
Query: 163 EPNLVSFNALIAGF-VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
E N+V++NA++ + ++ + E+F ML +G+ + +F L + LRKG
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
+H + + + FV ++ Y+K + +A K F + + + +WN+ I+A S
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISE 240
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
+ +F+ M + G R D TF SIL AC ++QHGK + + D+ VG
Sbjct: 241 RSGEAFFIFQRMQQE-GERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVG 299
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
AL+ MYA+C + ++F M N+++W+ II A A+H G AL+ F M+ GI
Sbjct: 300 TALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGIL 359
Query: 402 PDSVTFIGLL 411
P+ VTFI LL
Sbjct: 360 PNRVTFISLL 369
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 165/311 (53%), Gaps = 5/311 (1%)
Query: 144 MYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFS 203
MY + G DA+ +G+ N+VS+N +I+ + + ++ +F ML +G+ P+ +
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 204 FAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIE 263
L C +LR G+++H L+++ N V ++ +Y K + +A+ F +
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120
Query: 264 EKDLISWNTFIAACS--HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQH 321
EK++++WN + S C ++ + +F M + GV+ + TF ++L + +++
Sbjct: 121 EKNVVTWNAMLGVYSLQGCC-WKLAVELFTRMLLE-GVKANVITFLNVLNSVVDPDALRK 178
Query: 322 GKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN 381
GK IH+ + + DV V ALVN Y KCG ++ + K+F+ M R+V +WN++I+A++
Sbjct: 179 GKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSI 238
Query: 382 HRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIE 441
G A +F++M+ G + D VTF+ +L AC + ++ G+ S+ +T D+
Sbjct: 239 SERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISET-SFELDLF 297
Query: 442 HFTCLIDLLGR 452
T LI + R
Sbjct: 298 VGTALITMYAR 308
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 184/571 (32%), Positives = 327/571 (57%), Gaps = 7/571 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVI--VSNHVLNLYAKCGKMILARKVFD 61
+ ++LL C+ +HA +K+G ++ V N +L Y + ++ LA +F+
Sbjct: 143 TFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFE 202
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVK 118
E+ +++ V+++ +I+G+ + G + A+ F +M P+++ F+ + A G+
Sbjct: 203 EILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFAL 262
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
GQQ+H S+ G++ + VGN ++ Y K + ++ E E + VS+N +I+ + +
Sbjct: 263 GQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQ 322
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+Q E+ +F+ M G F FA L I + + L+ G +HC + +S V
Sbjct: 323 AEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHV 382
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
GN+++ +Y+K + EAE F+ + ++ +SW I+ + GL +F +M +
Sbjct: 383 GNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGAN- 441
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+R D TFA++L A AG AS+ GKQ+HA +IR ++V G+ LV+MYAKCG I +
Sbjct: 442 LRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 501
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
++F EM RN VSWN +I+A+A++ G +A+ F +M +G++PDSV+ +G+L AC+H G
Sbjct: 502 QVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCG 561
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
V++G +F +M YGI+P +H+ C++DLLGR G+ EAE+ + P D I+ ++
Sbjct: 562 FVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSV 621
Query: 479 LSACRLRRDVVIGERLAKQLFHLQP-TTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
L+ACR+ ++ + ER A+QLF ++ + YV +SN+YA+ G W +V +K +++ G+
Sbjct: 622 LNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRERGI 681
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
KK P+YS +EV F+ + +H EI
Sbjct: 682 KKVPAYSWVEVNHKIHVFSSNDQTHPNGDEI 712
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 231/463 (49%), Gaps = 32/463 (6%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHL-LALEFFSQM 94
+ + +N +++ Y K G + AR +FD M +R +V+W+ ++ G + H A + F QM
Sbjct: 74 NTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILM-GWYAGNNHFDEAFKLFRQM 132
Query: 95 ---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF--VGNSLISMYMKVG 149
LP+ F + + C Q+HA+++K G+ + F V N L+ Y +V
Sbjct: 133 CRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVR 192
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
A +++ E + + V+FN LI G+ ++ + +F M + G P F+F+G L+
Sbjct: 193 RLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLK 252
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
+D G LH L+V + VGN I+ YSK + + E F + E D +S
Sbjct: 253 AVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVS 312
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
+N I++ S YE+ L++F+EM G +F FA++L+ A L+S+Q G+Q+H
Sbjct: 313 YNVVISSYSQAEQYEESLNLFREMQC-MGFDRRNFPFATMLSIAANLSSLQVGRQVHCQA 371
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
I + + VGN+LV+MYAKC + + +F + R+ VSW +I+ + L G+ L
Sbjct: 372 IVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGL 431
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACN-----------HAGLVKEGEAYFNSMEKTYGISP 438
KLF +M+ ++ D TF +L A HA +++ G ++E + S
Sbjct: 432 KLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSG-----NLENVFSGSG 486
Query: 439 DIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
L+D+ + G + +A + ++ P ++ + L+SA
Sbjct: 487 -------LVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISA 521
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 52/126 (41%), Gaps = 31/126 (24%)
Query: 323 KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH--- 379
+++ A +I+ N D N V + G +S + K+++EM H+N VS NT+I+ +
Sbjct: 29 RRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKM 88
Query: 380 -----ANHRLGG-----------------------SALKLFEQMKATGIKPDSVTFIGLL 411
A H A KLF QM + PD VTF LL
Sbjct: 89 GDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLL 148
Query: 412 TACNHA 417
CN A
Sbjct: 149 PGCNDA 154
>gi|15231402|ref|NP_188004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273848|sp|Q9LRV9.1|PP228_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13880
gi|9294611|dbj|BAB02912.1| probable selenium-binding protein [Arabidopsis thaliana]
gi|332641909|gb|AEE75430.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 748
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 188/578 (32%), Positives = 317/578 (54%), Gaps = 12/578 (2%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
L C + L G LH V+ G+ V + N ++++Y+KCGK+ A +FD ER+
Sbjct: 155 LGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQ 214
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA---GIQSLVKGQQI 122
VSW+++ISG+ + G L ++MH L Y S + AC + KG I
Sbjct: 215 VSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAI 274
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE---- 178
H Y+ K G V +L+ MY K G +A+ ++ N+V++NA+I+GF++
Sbjct: 275 HCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEI 334
Query: 179 -NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
++ + F++F M R+GL P +F+ L+ CS + L G +H L K +S+ F
Sbjct: 335 TDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEF 394
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+G+ ++ LY+ + + F ++D+ SW + I E +F+++ + H
Sbjct: 395 IGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSH 454
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
+RP+++T + +++ACA A++ G+QI + I+ ++ V + ++MYAK G + +
Sbjct: 455 -IRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLA 513
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++F E+ + +V +++ +I++ A H AL +FE MK GIKP+ F+G+L AC H
Sbjct: 514 NQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHG 573
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV +G YF M+ Y I+P+ +HFTCL+DLLGR G+L +AE P+
Sbjct: 574 GLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRA 633
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LLS+CR+ +D VIG+R+A++L L+P + YVLL N+Y G+ R++++D G+
Sbjct: 634 LLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGV 693
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KKEP+ S I + F VA+ SH I ML+T+
Sbjct: 694 KKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 216/426 (50%), Gaps = 21/426 (4%)
Query: 46 LYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFF---SQMHLLPNEYI 102
+Y KC ++ AR++FD M ERN++S++++ISG+ Q G + A+E F + +L +++
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+A A+ C L G+ +H + G + F+ N LI MY K G A+ ++
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSND---LRK 219
E + VS+N+LI+G+V E+ + M R GL ++ L+ C ++ + + K
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 220 GMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSH 279
GM +HC T K +E + V ++ +Y+K + EA K F L+ K+++++N I+
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQ 330
Query: 280 CADY-----EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRL 334
+ + +F +M G+ P TF+ +L AC+ ++++G+QIHA + +
Sbjct: 331 MDEITDEASSEAFKLFMDMQR-RGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNF 389
Query: 335 NQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQ 394
D +G+AL+ +YA G + F +++ SW ++I H + SA LF Q
Sbjct: 390 QSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQ 449
Query: 395 MKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCL----IDLL 450
+ ++ I+P+ T +++AC + GE + Y I I+ FT + I +
Sbjct: 450 LFSSHIRPEEYTVSLMMSACADFAALSSGEQI-----QGYAIKSGIDAFTSVKTSSISMY 504
Query: 451 GRAGKL 456
++G +
Sbjct: 505 AKSGNM 510
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 159/318 (50%), Gaps = 9/318 (2%)
Query: 115 SLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIA 174
S+V G+ H + +K ++ N+L++MY K A ++ E N++SFN+LI+
Sbjct: 62 SVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLIS 121
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
G+ + E+ E+F L D+F++AG L C DL G +LH L V L
Sbjct: 122 GYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQ 181
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
F+ N ++ +YSK + +A F +E+D +SWN+ I+ E+ L++ +M
Sbjct: 182 QVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMH 241
Query: 295 NDHGVRPDDFTFASILAACA---GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
D G+ + S+L AC ++ G IH + ++ + D+ V AL++MYAK
Sbjct: 242 RD-GLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKN 300
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAA-----HANHRLGGSALKLFEQMKATGIKPDSVT 406
G + + KLF+ M +NVV++N +I+ A KLF M+ G++P T
Sbjct: 301 GSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPST 360
Query: 407 FIGLLTACNHAGLVKEGE 424
F +L AC+ A ++ G
Sbjct: 361 FSVVLKACSAAKTLEYGR 378
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 135/279 (48%), Gaps = 5/279 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S +L CS K L+ G +HA + K Q D + + ++ LYA G + F
Sbjct: 360 TFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFAST 419
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
S++++ SW++MI H Q + A + F Q+ H+ P EY + +SACA +L G+
Sbjct: 420 SKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGE 479
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QI Y++K G + + V S ISMY K G A V+ E P++ +++A+I+ ++
Sbjct: 480 QIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHG 539
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVG 239
+ +F+ M G+ P++ +F G L C + +G+ C+ ++ N
Sbjct: 540 SANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHF 599
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKD-LISWNTFIAAC 277
++ L + + +AE +D ++W +++C
Sbjct: 600 TCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSC 638
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 1/158 (0%)
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D + + A SV GK H H+I+ LN + + N L+NMY KC + + +LF
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 105
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ M RN++S+N++I+ + A++LF + + +K D T+ G L C +
Sbjct: 106 DRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLD 165
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
GE + + G+S + LID+ + GKL +A
Sbjct: 166 LGE-LLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQA 202
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 205/580 (35%), Positives = 316/580 (54%), Gaps = 7/580 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLK-MGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
A ++ LL + T +++ G +HA ++K + P ++N+++N+Y+K AR V
Sbjct: 6 ADALGLLLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVL 65
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLAL-EFFSQMH--LLPNEYIFASAISACAGIQSLV 117
RN+VSW++++SG Q G AL EFF + PN++ F A A ++ V
Sbjct: 66 RLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPV 125
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+QIHA ++K G FVG S MY K DA ++ E E NL ++NA I+ V
Sbjct: 126 TGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSV 185
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ +P++ E F R G P+ +F G L CS L GM +H L + +++
Sbjct: 186 TDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVS 245
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N ++ Y K I +E F + K+ +SW + +AA + EK SV S
Sbjct: 246 VYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKA-SVLYLRSRKE 304
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
V DF +S+L+ACAG+A ++ G+ IHAH ++ + +++ VG+ALV+MY KCG I S
Sbjct: 305 IVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDS 364
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM--KATGIKPDSVTFIGLLTACN 415
+ F+EM +N+V+ N++I +A+ AL LFE M + G P+ +TF+ LL+AC+
Sbjct: 365 EQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACS 424
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
AG V+ G F+SM+ TYGI P EH++C++D+LGRAG + +A E+ KK P+ V
Sbjct: 425 RAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVW 484
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
G L +ACR+ +G A+ LF L P + +VLLSN +A+ G W + R+ +K
Sbjct: 485 GALQNACRMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGV 544
Query: 536 GLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
G+KK YS I V+ F + SH EI ML L
Sbjct: 545 GIKKGAGYSWITVKNQVHAFQAKDRSHKMNKEIQTMLTKL 584
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 192/562 (34%), Positives = 318/562 (56%), Gaps = 12/562 (2%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G +HA +K G V V N ++N+YAKCG + AR VF M R++VSW+ +++G
Sbjct: 224 GRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVL 283
Query: 81 AGEHLLALEFF----SQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF 136
G L AL+ F S + +L + +A+ I CA I+ L +Q+H+ LK G+ S
Sbjct: 284 NGHDLEALQLFHDSRSSITML-TQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGN 342
Query: 137 VGNSLISMYMKVGYSSDALLVYG-EAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
V +L+ Y K G +AL ++ + N+VS+ A+I G ++N +F M
Sbjct: 343 VMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMRED 402
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
G+ P+ F+++ L S + +H +K E VG ++A YSK EA
Sbjct: 403 GVAPNDFTYSTILTASVASLPPQ----IHAQVIKTNYECTSIVGTALLASYSKLCNTEEA 458
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
F++I++KD++SW+ + + D + ++F +M+ HG++P++FT +S++ ACA
Sbjct: 459 LSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTM-HGLKPNEFTISSVIDACAS 517
Query: 316 -LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNT 374
A V G+Q HA I+ R + + V +ALV+MYA+ G I + +F R++VSWN+
Sbjct: 518 PTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNS 577
Query: 375 IIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTY 434
+++ +A H AL +F QM+A GI+ D VTF+ ++ C HAGLV+EG+ YF+SM + Y
Sbjct: 578 MLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDY 637
Query: 435 GISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERL 494
GI+P +EH+ C++DL RAGKL EA + P+V TLL AC++ ++V +G+
Sbjct: 638 GITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLA 697
Query: 495 AKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEK 554
A++L L+P ++ YVLLSN+Y++ G W + RK++ +KKE S I+++
Sbjct: 698 AEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHS 757
Query: 555 FTVAEFSHSKIGEINYMLKTLS 576
F ++ SH +I L+ ++
Sbjct: 758 FIASDKSHPLSEQIYAKLRAMT 779
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 203/399 (50%), Gaps = 10/399 (2%)
Query: 21 GISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHH 79
G LH ++ G + DV V ++++Y K ++ RKVF+ M +RN+V+W+++++G+
Sbjct: 122 GKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYI 181
Query: 80 QAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF 136
Q G +E F +M + PN FAS +S A + G+++HA S+KFG S F
Sbjct: 182 QDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVF 241
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
V NSL++MY K G +A +V+ ++VS+N L+AG V N + ++F
Sbjct: 242 VCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSI 301
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
+ + ++A +++C+ L LH +K S V +M YSK +G A
Sbjct: 302 TMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNAL 361
Query: 257 KAFRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
F L+ ++++SW I C D ++F M D GV P+DFT+++IL A
Sbjct: 362 DIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMRED-GVAPNDFTYSTILT--AS 418
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
+AS+ QIHA +I+ VG AL+ Y+K + +F + ++VVSW+ +
Sbjct: 419 VASLP--PQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAM 476
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ +A A +F +M G+KP+ T ++ AC
Sbjct: 477 LTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDAC 515
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 176/364 (48%), Gaps = 9/364 (2%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAI----SACA 111
AR+ FDE+ RN + + + H + G AL+ F +H + A+ C
Sbjct: 57 ARQAFDEIPHRNTLDHA--LFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCG 114
Query: 112 GIQSLVKGQQIHAYSLKFGYASISF-VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFN 170
+ V G+Q+H ++ G+ VG SL+ MYMK D V+ + N+V++
Sbjct: 115 SVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWT 174
Query: 171 ALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC 230
+L+ G++++ E+F M +G+ P+ +FA L + + + G +H +VK
Sbjct: 175 SLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKF 234
Query: 231 KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVF 290
S FV N++M +Y+K L+ EA F +E +D++SWNT +A + L +F
Sbjct: 235 GCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLF 294
Query: 291 KEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
+ S T+A+++ CA + + +Q+H+ +++ + V AL++ Y+K
Sbjct: 295 HD-SRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSK 353
Query: 351 CGLISCSYKLFNEML-HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
G + + +F M +NVVSW +I + A LF +M+ G+ P+ T+
Sbjct: 354 AGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYST 413
Query: 410 LLTA 413
+LTA
Sbjct: 414 ILTA 417
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 143/309 (46%), Gaps = 27/309 (8%)
Query: 203 SFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF-VGNTIMALYSKFNLIGEAEKAFRL 261
+ G L++C D G LH L ++C + VG +++ +Y K++ + + K F
Sbjct: 105 ALVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEA 164
Query: 262 IEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQH 321
+ ++++++W + + + +F M + GV P+ TFAS+L+ A V
Sbjct: 165 MPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAE-GVWPNSVTFASVLSVVASQGMVDL 223
Query: 322 GKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN 381
G+++HA ++ V V N+L+NMYAKCGL+ + +F M R++VSWNT++A
Sbjct: 224 GRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVL 283
Query: 382 HRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN-----------HAGLVKEG-EAYFNS 429
+ AL+LF +++ T+ ++ C H+ ++K G +Y N
Sbjct: 284 NGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNV 343
Query: 430 MEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVV 489
M T L+D +AG+L A + Q+ + +++ C DV
Sbjct: 344 M-------------TALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVP 390
Query: 490 IGERLAKQL 498
+ L ++
Sbjct: 391 LAAALFSRM 399
>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 178/543 (32%), Positives = 307/543 (56%), Gaps = 39/543 (7%)
Query: 20 QGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHH 79
G +H +K G + D+ ++N +L++YAK G M A +F M E ++VSW+ MI+G+
Sbjct: 241 HGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYG 300
Query: 80 QAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF 136
Q + A+E+ +M P+E + + + AC + G+Q+ F
Sbjct: 301 QKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQM-------------F 347
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
G S P+L S+N +++G+ +N+ ++ ++F+ M +
Sbjct: 348 DGMS----------------------SPSLSSWNTILSGYSQNENHKEAVKLFREMQFRS 385
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
+ PDR + A L + L G +H ++ K ++ ++ + ++ +YSK + A+
Sbjct: 386 VHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAK 445
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
+ F I E D++ WN+ +A S + ++ + FK+M + G+ P F++A++L+ CA L
Sbjct: 446 RIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKM-REKGMFPSQFSYATVLSCCAKL 504
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
+S+ G+Q+H+ + R D VG+AL++MY+KCG + + +F+ ML +N V+WN +I
Sbjct: 505 SSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMI 564
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
+A + G A+ L+E M +G KPD +TF+ +LTAC+H+GLV G FNSM++ +G+
Sbjct: 565 HGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGV 624
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAK 496
P ++H+TC+ID LGRAG+L EAE K P DPI+ LLS+CR+ DV + R A+
Sbjct: 625 EPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAE 684
Query: 497 QLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFT 556
+LFHL P ++PYVLL+N+Y+S G W D R+++ + + K+P YS IE + + F
Sbjct: 685 ELFHLDPQNSAPYVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNGMQAFM 744
Query: 557 VAE 559
V +
Sbjct: 745 VDD 747
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 131/475 (27%), Positives = 231/475 (48%), Gaps = 64/475 (13%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
++SLL C KA G +HA +L+ + D +SN ++ YAKC + +R++FD+M
Sbjct: 8 LASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMP 67
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFA-----SAIS---ACAGIQSL 116
+R++ +W+A++ + +A E A F++M P I + SA++ AC + +
Sbjct: 68 KRDIYTWNAILGAYCKASELEDAHVLFAEM---PERNIVSWNTLISALTRNGACGALVDV 124
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G++ H S+K G + +VGN+L+ MY K DA+ +G+ EPN VSF A++ G
Sbjct: 125 ECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGL 184
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSV----------SNDLRK----GMI 222
++ Q + F +F+LMLR + D S + L +CS SND+ G
Sbjct: 185 ADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQ 244
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
+HCLT+K ES+ + N+++ +Y+K + AE F + E ++SWN IA +
Sbjct: 245 VHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQ 304
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
K + + M HG PD+ T+ ++L AC ++ G+Q
Sbjct: 305 SSKAIEYLQRMQY-HGFEPDEITYVNMLVACIKSGDIEAGRQ------------------ 345
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
+F+ M ++ SWNTI++ ++ + A+KLF +M+ + P
Sbjct: 346 -----------------MFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHP 388
Query: 403 DSVTFIGLLTACNHAG-LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
D T +L++ AG ++ EG +++ + DI + LI + + GK+
Sbjct: 389 DRTTLAIILSSL--AGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKV 441
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 145/273 (53%), Gaps = 11/273 (4%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L+ G +HA K + D+ +++ ++ +Y+KCGK+ +A+++FD ++E ++V W++M++G
Sbjct: 406 LEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAG 465
Query: 78 HHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
A FF +M + P+++ +A+ +S CA + SL +G+Q+H+ + GY +
Sbjct: 466 LSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMND 525
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
+FVG++LI MY K G A V+ N V++N +I G+ +N ++ +++ M+
Sbjct: 526 AFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIG 585
Query: 195 QGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
G PD +F L CS S + G+ I + + + +E P V + + G
Sbjct: 586 SGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVE--PLV-DHYTCIIDSLGRAG 642
Query: 254 EAEKAFRLIEEK----DLISWNTFIAACSHCAD 282
+A LI++ D I W +++C AD
Sbjct: 643 RLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYAD 675
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 10/131 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S +++L C+K +L QG +H+ + + G D V + ++++Y+KCG + AR VFD M
Sbjct: 493 SYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMM 552
Query: 64 SERNLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACA-------GI 113
+N V+W+ MI G+ Q G E +L E P+ F + ++AC+ GI
Sbjct: 553 LGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGI 612
Query: 114 QSLVKGQQIHA 124
+ QQ H
Sbjct: 613 KIFNSMQQEHG 623
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 196/568 (34%), Positives = 318/568 (55%), Gaps = 8/568 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L CS L+ ++H + G+ D+ VS ++++YAKC A VF M R+
Sbjct: 135 VLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARD 194
Query: 68 LVSWSAMISGHHQAGEH--LLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAY 125
+V+W+AM++G+ G++ +A Q PN + + A +L +G+ +HAY
Sbjct: 195 VVAWNAMLAGYALHGKYSDTIACLLLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAY 254
Query: 126 SLK----FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
S++ + VG +L+ MY K G+ A V+ N V+++AL+ GFV +
Sbjct: 255 SVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGR 314
Query: 182 PEKGFEVFKLMLRQGL-LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ F +FK ML QGL S A L C+ +DL G LH L K L ++ GN
Sbjct: 315 MLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGN 374
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++++Y+K LI +A F + KD +S++ ++ ++ VF++M + V+
Sbjct: 375 SLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACN-VQ 433
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD T S++ AC+ LA++QHGK H +I + + + NAL++MYAKCG I S ++
Sbjct: 434 PDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQI 493
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+ M R++VSWNT+IA + H LG A LF MK +PD VTFI L++AC+H+GLV
Sbjct: 494 FDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLV 553
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG+ +F+ M YGI+P +EH+ ++DLL R G L EA ++ + PL D V G LL
Sbjct: 554 TEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLG 613
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ +++ +G++++ + L P T +VLLSN++++ G + + A R + K+ G KK
Sbjct: 614 ACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKS 673
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
P S IE+ G+ F + SH++ EI
Sbjct: 674 PGCSWIEINGSLHAFIGGDRSHAQSSEI 701
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 215/438 (49%), Gaps = 10/438 (2%)
Query: 50 CGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASA 106
CG + LAR +FD++ + ++A+I + G L + S PN Y F
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 107 ISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNL 166
+ AC+ + L + +H ++ + G + FV +L+ +Y K A V+ ++
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195
Query: 167 VSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCL 226
V++NA++AG+ + + L+++ P+ + L + + L +G +H
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACL-LLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAY 254
Query: 227 TVK-CKLESNP---FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
+V+ C L + VG ++ +Y+K + A + F + ++ ++W+ + C
Sbjct: 255 SVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGR 314
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
+ S+FK+M + AS L ACA L+ + GKQ+HA L + L+ D+ GN
Sbjct: 315 MLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGN 374
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
+L++MYAK GLI + LF++M+ ++ VS++ +++ + + A ++F +M+A ++P
Sbjct: 375 SLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQP 434
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
D T + L+ AC+H ++ G+ S+ GI+ + LID+ + G++ + +
Sbjct: 435 DVATMVSLIPACSHLAALQHGKCGHGSV-IVRGIASETSICNALIDMYAKCGRIDLSRQI 493
Query: 463 TKKFPLGQDPIVLGTLLS 480
P +D + T+++
Sbjct: 494 FDVMP-ARDIVSWNTMIA 510
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 150/301 (49%), Gaps = 17/301 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S++S L C+ L G LHA + K G+ D+ N +L++YAK G + A +FD+M
Sbjct: 337 SVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQM 396
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
++ VS+SA++SG+ Q G+ A F +M ++ P+ S I AC+ + +L G+
Sbjct: 397 VVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGK 456
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
H + G AS + + N+LI MY K G + ++ ++VS+N +IAG+ +
Sbjct: 457 CGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHG 516
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKG-----MILHCLTVKCKLESN 235
++ +F M Q PD +F + CS S + +G M+ H + ++E
Sbjct: 517 LGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEH- 575
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEK-DLISWNTFIAACSHCADYEKGLSVFKEMS 294
++G ++ L ++ + EA + + + K D+ W + AC K + + K++S
Sbjct: 576 -YIG--MVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACR----VHKNIDLGKQVS 628
Query: 295 N 295
+
Sbjct: 629 S 629
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 115/222 (51%), Gaps = 19/222 (8%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ SL+ CS ALQ G H +V+ GI + + N ++++YAKCG++ L+R++FD M
Sbjct: 438 TMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVM 497
Query: 64 SERNLVSWSAMISGH--HQAGEHLLALEFFSQMHLL--PNEYIFASAISACAGIQSLVKG 119
R++VSW+ MI+G+ H G+ AL F H P++ F ISAC+ + +G
Sbjct: 498 PARDIVSWNTMIAGYGIHGLGKEATAL-FLDMKHQACEPDDVTFICLISACSHSGLVTEG 556
Query: 120 QQ-IHAYSLKFGYASI--SFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIAG 175
++ H + K+G ++G ++ + + G+ +A + G + ++ + AL+
Sbjct: 557 KRWFHMMAHKYGITPRMEHYIG--MVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGA 614
Query: 176 FVENQQPEKGFEVFKLMLRQG--------LLPDRFSFAGGLE 209
++ + G +V ++ + G LL + FS AG +
Sbjct: 615 CRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFD 656
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 8/215 (3%)
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+P+++TF +L AC+ L ++ + +H H R L+ D+ V ALV++YAKC +
Sbjct: 126 QPNNYTFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAAT 185
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F M R+VV+WN ++A +A H + M+ P++ T + LL G
Sbjct: 186 VFRRMPARDVVAWNAMLAGYALHGKYSDTIACLLLMQDDH-APNASTLVALLPLLAQHGA 244
Query: 420 VKEGEAYFNSMEKTYGISPDIEHF---TCLIDLLGRAGKLLEA----EEYTKKFPLGQDP 472
+ +G A + + + T L+D+ + G L+ A E + +
Sbjct: 245 LSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSA 304
Query: 473 IVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTS 507
+V G +L L + + LA+ L L PT+ +
Sbjct: 305 LVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVA 339
>gi|222622248|gb|EEE56380.1| hypothetical protein OsJ_05522 [Oryza sativa Japonica Group]
Length = 518
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 184/527 (34%), Positives = 301/527 (57%), Gaps = 39/527 (7%)
Query: 46 LYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYI 102
+Y KC +M A KVF+ + +VSW+ +I+G Q G A+E S M PNE
Sbjct: 1 MYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVT 60
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+++ +++C +K + +H S +M+ K+
Sbjct: 61 YSNLLASC------IKARDVH----------------SARAMFDKIS------------- 85
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
P++ ++N L++G+ + +Q + E+F+ M Q + PDR + A L CS L G
Sbjct: 86 RPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQ 145
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
+H +V+ L ++ FV + ++ +YSK IG A F + E+D++ WN+ I+ + +
Sbjct: 146 VHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSL 205
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
++ FK+M ++G+ P + ++AS++ +C+ L+S+ HG+QIHA +++ +Q+V VG+
Sbjct: 206 NKEAFDFFKQM-RENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGS 264
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
AL++MYAKCG + + F+ M+ +N+V+WN +I +A + LG A++LFE M T KP
Sbjct: 265 ALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKP 324
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
D+VTFI +LT C+H+GLV + A+FNSME +YGI P EH+TCLID LGRAG+ +E E
Sbjct: 325 DAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEAL 384
Query: 463 TKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMW 522
K P DPI+ LL+AC + + +G+ A+ LF + P SPYVLLSN+YAS G
Sbjct: 385 IHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLSNIYASLGRH 444
Query: 523 GDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEIN 569
GD + R ++ + G+ K YS I+ + F VA+ + GE+
Sbjct: 445 GDASAVRALMSNRGVVKGRGYSWIDQKDGVRAFMVADDLGADGGELT 491
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 153/288 (53%), Gaps = 23/288 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++ +L CSK L G +H+A ++ + D+ V++ ++++Y+KCG++ +AR +F++M
Sbjct: 126 TLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKM 185
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+ER++V W+++ISG + A +FF QM ++P E +AS I++C+ + S+ G+
Sbjct: 186 TERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGR 245
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIHA +K GY +VG++LI MY K G DA L + N+V++N +I G+ +N
Sbjct: 246 QIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNG 305
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+K E+F+ ML PD +F L CS S + K M N +
Sbjct: 306 LGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFF------NSMENSY--- 356
Query: 241 TIMALYSKFN-LIGEAEKAFRLIE----------EKDLISWNTFIAAC 277
I+ L + LI +A R +E + D I W +AAC
Sbjct: 357 GIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAAC 404
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 152/286 (53%), Gaps = 4/286 (1%)
Query: 32 GIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFF 91
G +P+ + +++L K + AR +FD++S ++ +W+ ++SG+ Q +H +E F
Sbjct: 53 GFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELF 112
Query: 92 SQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKV 148
+M ++ P+ A +S+C+ + L G+Q+H+ S++F + FV + L+ MY K
Sbjct: 113 RRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKC 172
Query: 149 GYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGL 208
G A ++ + E ++V +N++I+G + ++ F+ FK M G++P S+A +
Sbjct: 173 GQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMI 232
Query: 209 EICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLI 268
CS + + G +H +K + N +VG+ ++ +Y+K + +A F + K+++
Sbjct: 233 NSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIV 292
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA 314
+WN I + +K + +F+ M +PD TF ++L C+
Sbjct: 293 AWNEMIHGYAQNGLGDKAVELFEYMLTTEQ-KPDAVTFIAVLTGCS 337
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 199/582 (34%), Positives = 316/582 (54%), Gaps = 19/582 (3%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE-RN 67
L C ++L+ GI +H V+ ++ D VSN +LN+Y KCG + A++VF +M RN
Sbjct: 152 LGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRN 211
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHA 124
++SWS M H G AL F M LL + + +SAC+ + G+ IH+
Sbjct: 212 VISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHS 271
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEP--NLVSFNALIAGFVENQQP 182
G+ S V N++++MY + G +A V+ E ++VS+N +++ +V N
Sbjct: 272 CIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHN--- 328
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
++G + +L R L D+ ++ L CS + D+ G +LH V +LE N VGN +
Sbjct: 329 DRGKDAIQLYQRMQLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNAL 388
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA-------CSHCADYEKGLSVFKEMSN 295
+++Y+K EA F +E++ +ISW T I+A C +++ L + K S+
Sbjct: 389 VSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSS 448
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
V+PD F +IL ACA +++++ GK + L+ D VG A+VN+Y KCG I
Sbjct: 449 QR-VKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIE 507
Query: 356 CSYKLFNEMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
++F+ + R +V WN +IA +A ALKLF +M+ G++PDS +F+ +L AC
Sbjct: 508 EGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLAC 567
Query: 415 NHAGLVKEGEAYFNSMEKTY-GISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
+H GL +G++YF SM Y ++ I+HF C+ DLLGR G+L EAEE+ +K P+ D +
Sbjct: 568 SHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAV 627
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
+LL+ACR RD+ + +A +L L+P + YV LSN+YA W VA RK +
Sbjct: 628 AWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMA 687
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ G+KKE S IE+ F + +H + EI L L
Sbjct: 688 EQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKL 729
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/469 (28%), Positives = 245/469 (52%), Gaps = 19/469 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQP-DVIVSNHVLNLYAKCGKMILARKVFDE 62
+ + LL C++ +AL +G +H+ +K + P ++I+ NH++++YA C A+ FD
Sbjct: 45 TYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAAFDA 104
Query: 63 MSERNLVSWSAMISG---HHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKG 119
+ +RNL SW+ +++ Q+ E L ALE Q + P+ F +A+ +C +SL G
Sbjct: 105 LEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDG 164
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEP-NLVSFNALIAGFVE 178
+IH + V N+L++MY K G S A V+ + N++S++ +
Sbjct: 165 IRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHAL 224
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ + F+ ML G+ + + L CS ++ G ++H ES V
Sbjct: 225 HGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLV 284
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEE--KDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
N +M +Y + + EA K F ++E +D++SWN ++A H + + +++ M
Sbjct: 285 ANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQ-- 342
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
+R D T+ S+L+AC+ V G+ +H ++ L ++V VGNALV+MYAKCG +
Sbjct: 343 --LRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTE 400
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-------KATGIKPDSVTFIG 409
+ +F++M R+++SW TII+A+ RL A LF+QM + +KPD++ F+
Sbjct: 401 ARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVT 460
Query: 410 LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLE 458
+L AC +++G+ + + G+S D T +++L G+ G++ E
Sbjct: 461 ILNACADVSALEQGK-MVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEE 508
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 207/417 (49%), Gaps = 20/417 (4%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFV-GNSLISMYMKVGYSSDALLVYGEA 161
+A + CA Q+L +G++IH+ ++K + + GN ++SMY DA +
Sbjct: 46 YARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAAFDAL 105
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
+ NL S+ L+A F + Q ++ + M + G+ PD +F L C LR G+
Sbjct: 106 EQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGI 165
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE-KDLISWNTFIAACSHC 280
+H + V +LE +P V N ++ +Y K + A++ F +E +++ISW+ A +
Sbjct: 166 RIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALH 225
Query: 281 ADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV 340
+ + L F+ M G++ +IL+AC+ A VQ G+ IH+ + ++ V
Sbjct: 226 GNVWEALRHFRFMLL-LGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLV 284
Query: 341 GNALVNMYAKCGLISCSYKLFNEMLH--RNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
NA++ MY +CG + + K+F+ M R+VVSWN +++A+ ++ G A++L+++M+
Sbjct: 285 ANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQ-- 342
Query: 399 GIKPDSVTFIGLLTACNHA-----GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 453
++ D VT++ LL+AC+ A G V + + +EK + L+ + +
Sbjct: 343 -LRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVG------NALVSMYAKC 395
Query: 454 GKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYV 510
G EA K + I T++SA RR V L +Q+ L+ +S V
Sbjct: 396 GSHTEARAVFDKME-QRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRV 451
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 91/179 (50%), Gaps = 4/179 (2%)
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLIS 355
VR ++ T+A +L CA ++ G++IH+ ++ L ++ +GN +V+MYA C
Sbjct: 37 QAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPG 96
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ F+ + RN+ SW ++AA A L+ E+M+ G++PD+VTFI L +C
Sbjct: 97 DAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCG 156
Query: 416 HAGLVKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
+++G + ++ I P + + L+++ + G L A+ K ++ I
Sbjct: 157 DPESLRDGIRIHQMVVDSRLEIDPKVSN--ALLNMYKKCGSLSHAKRVFAKMERTRNVI 213
>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Vitis vinifera]
Length = 847
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 178/543 (32%), Positives = 307/543 (56%), Gaps = 39/543 (7%)
Query: 20 QGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHH 79
G +H +K G + D+ ++N +L++YAK G M A +F M E ++VSW+ MI+G+
Sbjct: 270 HGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYG 329
Query: 80 QAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF 136
Q + A+E+ +M P+E + + + AC + G+Q+ F
Sbjct: 330 QKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQM-------------F 376
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
G S P+L S+N +++G+ +N+ ++ ++F+ M +
Sbjct: 377 DGMS----------------------SPSLSSWNTILSGYSQNENHKEAVKLFREMQFRS 414
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
+ PDR + A L + L G +H ++ K ++ ++ + ++ +YSK + A+
Sbjct: 415 VHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAK 474
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
+ F I E D++ WN+ +A S + ++ + FK+M + G+ P F++A++L+ CA L
Sbjct: 475 RIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKM-REKGMFPSQFSYATVLSCCAKL 533
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
+S+ G+Q+H+ + R D VG+AL++MY+KCG + + +F+ ML +N V+WN +I
Sbjct: 534 SSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMI 593
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
+A + G A+ L+E M +G KPD +TF+ +LTAC+H+GLV G FNSM++ +G+
Sbjct: 594 HGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGV 653
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAK 496
P ++H+TC+ID LGRAG+L EAE K P DPI+ LLS+CR+ DV + R A+
Sbjct: 654 EPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAE 713
Query: 497 QLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFT 556
+LFHL P ++PYVLL+N+Y+S G W D R+++ + + K+P YS IE + + F
Sbjct: 714 ELFHLDPQNSAPYVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNGMQAFM 773
Query: 557 VAE 559
V +
Sbjct: 774 VDD 776
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/501 (27%), Positives = 230/501 (45%), Gaps = 87/501 (17%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD--- 61
++SLL C KA G +HA +L+ + D +SN ++ YAKC + +R++FD
Sbjct: 8 LASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMP 67
Query: 62 ----------------------------EMSERNLVSWSAMISGHHQAGEHLLALEFFSQ 93
EM ERN+VSW+ +IS + G AL + +
Sbjct: 68 KRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYR 127
Query: 94 MH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGY 150
M +P + AS +SAC + + G++ H S+K G + +VGN+L+ MY K
Sbjct: 128 MSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRC 187
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
DA+ +G+ EPN VSF A++ G ++ Q + F +F+LMLR + D S + L +
Sbjct: 188 IGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGV 247
Query: 211 CSV----------SNDLRK----GMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
CS SND+ G +HCLT+K ES+ + N+++ +Y+K + AE
Sbjct: 248 CSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAE 307
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
F + E ++SWN IA + K + + M HG PD+ T+ ++L AC
Sbjct: 308 MIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQY-HGFEPDEITYVNMLVACIKS 366
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
++ G+Q +F+ M ++ SWNTI+
Sbjct: 367 GDIEAGRQ-----------------------------------MFDGMSSPSLSSWNTIL 391
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG-LVKEGEAYFNSMEKTYG 435
+ ++ + A+KLF +M+ + PD T +L++ AG ++ EG +++ +
Sbjct: 392 SGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSL--AGMMLLEGGRQVHAVSQKAV 449
Query: 436 ISPDIEHFTCLIDLLGRAGKL 456
DI + LI + + GK+
Sbjct: 450 FRTDIYLASGLIGMYSKCGKV 470
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/493 (23%), Positives = 225/493 (45%), Gaps = 55/493 (11%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++S+L C ++ G H +K+G+ ++ V N +L +YAKC + A + F ++
Sbjct: 139 TLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDV 198
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAG-------- 112
E N VS++AM+ G + + A F M + + +S + C+
Sbjct: 199 PEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGL 258
Query: 113 ------IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNL 166
+ S V GQQ+H ++K G+ S + NSL+ MY K G A +++ E ++
Sbjct: 259 HDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSV 318
Query: 167 VSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCL 226
VS+N +IAG+ + Q K E + M G PD ++ L C S D+ G
Sbjct: 319 VSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAG------ 372
Query: 227 TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKG 286
+ F + L SWNT ++ S ++++
Sbjct: 373 -----------------------------RQMFDGMSSPSLSSWNTILSGYSQNENHKEA 403
Query: 287 LSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVN 346
+ +F+EM V PD T A IL++ AG+ ++ G+Q+HA + D+ + + L+
Sbjct: 404 VKLFREMQF-RSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIG 462
Query: 347 MYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVT 406
MY+KCG + + ++F+ + ++V WN+++A + + L A F++M+ G+ P +
Sbjct: 463 MYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFS 522
Query: 407 FIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
+ +L+ C + +G + + + G D + LID+ + G ++A +
Sbjct: 523 YATVLSCCAKLSSLSQGRQVHSQIARE-GYMNDAFVGSALIDMYSKCGD-VDAARWVFDM 580
Query: 467 PLGQDPIVLGTLL 479
LG++ + ++
Sbjct: 581 MLGKNTVTWNEMI 593
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 145/273 (53%), Gaps = 11/273 (4%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L+ G +HA K + D+ +++ ++ +Y+KCGK+ +A+++FD ++E ++V W++M++G
Sbjct: 435 LEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAG 494
Query: 78 HHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
A FF +M + P+++ +A+ +S CA + SL +G+Q+H+ + GY +
Sbjct: 495 LSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMND 554
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
+FVG++LI MY K G A V+ N V++N +I G+ +N ++ +++ M+
Sbjct: 555 AFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIG 614
Query: 195 QGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
G PD +F L CS S + G+ I + + + +E P V + + G
Sbjct: 615 SGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVE--PLV-DHYTCIIDSLGRAG 671
Query: 254 EAEKAFRLIEEK----DLISWNTFIAACSHCAD 282
+A LI++ D I W +++C AD
Sbjct: 672 RLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYAD 704
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 8/155 (5%)
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
AS+L C + GK IHAH++R RL+ D + N L+ YAKC I S +LF++M
Sbjct: 8 LASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMP 67
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
R++ +WN I+ A+ A LF +M I V++ L++A G ++
Sbjct: 68 KRDIYTWNAILGAYCKASELEDAHVLFAEMPERNI----VSWNTLISALTRNGFEQKALG 123
Query: 426 YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
+ M + G P HFT L +L G L++ E
Sbjct: 124 VYYRMSRE-GFVP--THFT-LASVLSACGALVDVE 154
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 10/131 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S +++L C+K +L QG +H+ + + G D V + ++++Y+KCG + AR VFD M
Sbjct: 522 SYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMM 581
Query: 64 SERNLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACA-------GI 113
+N V+W+ MI G+ Q G E +L E P+ F + ++AC+ GI
Sbjct: 582 LGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGI 641
Query: 114 QSLVKGQQIHA 124
+ QQ H
Sbjct: 642 KIFNSMQQEHG 652
>gi|297843162|ref|XP_002889462.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335304|gb|EFH65721.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 608
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 191/548 (34%), Positives = 305/548 (55%), Gaps = 11/548 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCG-KMILARKVFDEMS 64
+SLL C K + G+ HA V+K G++ D V N +L+LY K G M R+VFD M
Sbjct: 64 ASLLQTCRKVFSFIHGLQFHAHVVKSGLETDRNVGNSLLSLYFKLGPDMRETRRVFDGMF 123
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
++ +SW++M+SG+ + EH+ ALE F +M L PN++ +SA+ AC + + G+
Sbjct: 124 VKDAISWTSMMSGYVASKEHVKALEVFVEMVSFGLQPNKFTLSSAVKACFELGEVRLGRC 183
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
H + G+ + ++L MY DA V+ E EP+++ + A+++ F +N
Sbjct: 184 FHGVVITHGFEWNHVISSTLAYMYGVNKEPVDARRVFDEMPEPDVICWTAVLSAFSKNDL 243
Query: 182 PEKGFEVFKLMLR-QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E+ +F M R +GL+PD +F L C L++G +H + + SN V +
Sbjct: 244 YEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVES 303
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +Y K + EA + F + K+++SW+ + ++EK + +F+EM
Sbjct: 304 SLLDMYGKSGSVREARQVFNGMPRKNIVSWSALLGGYCQNGEHEKAIEMFREMEE----- 358
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D + F ++L ACAGLA+V+ GK+IH +R +V V +AL+++Y K G I + ++
Sbjct: 359 KDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDYASRV 418
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
+++M RN+++WN +++A A + G A+ F M GIKPD ++FI +LTAC H GLV
Sbjct: 419 YSKMSVRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAVLTACGHTGLV 478
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+EG YF M K+YGI P EH++C+IDLLGRAG EAE + D + G LL
Sbjct: 479 EEGRNYFALMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLDRAECRNDASLWGVLLG 538
Query: 481 ACRLRRDV-VIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
C D I ER+AK++ L+P YVLLSN+Y + G GD RK++ G+ K
Sbjct: 539 PCAANTDASSIAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALKIRKLMVRRGVAK 598
Query: 540 EPSYSMIE 547
S I+
Sbjct: 599 TVGQSWID 606
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 196/381 (51%), Gaps = 7/381 (1%)
Query: 102 IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS-SDALLVYGE 160
++AS + C + S + G Q HA+ +K G + VGNSL+S+Y K+G + V+
Sbjct: 62 LYASLLQTCRKVFSFIHGLQFHAHVVKSGLETDRNVGNSLLSLYFKLGPDMRETRRVFDG 121
Query: 161 AFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKG 220
F + +S+ ++++G+V +++ K EVF M+ GL P++F+ + ++ C ++R G
Sbjct: 122 MFVKDAISWTSMMSGYVASKEHVKALEVFVEMVSFGLQPNKFTLSSAVKACFELGEVRLG 181
Query: 221 MILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHC 280
H + + E N + +T+ +Y +A + F + E D+I W ++A S
Sbjct: 182 RCFHGVVITHGFEWNHVISSTLAYMYGVNKEPVDARRVFDEMPEPDVICWTAVLSAFSKN 241
Query: 281 ADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV 340
YE+ L +F M G+ PD TF ++L AC L ++ GK+IH LI + +V V
Sbjct: 242 DLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVV 301
Query: 341 GNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGI 400
++L++MY K G + + ++FN M +N+VSW+ ++ + + A+++F +M+
Sbjct: 302 ESSLLDMYGKSGSVREARQVFNGMPRKNIVSWSALLGGYCQNGEHEKAIEMFREME---- 357
Query: 401 KPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
+ D F +L AC V+ G+ + G ++ + LIDL G++G + A
Sbjct: 358 EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRR-GCFGNVIVESALIDLYGKSGCIDYAS 416
Query: 461 EYTKKFPLGQDPIVLGTLLSA 481
K + ++ I +LSA
Sbjct: 417 RVYSKMSV-RNMITWNAMLSA 436
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 190/383 (49%), Gaps = 11/383 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS + C + ++ G H V+ G + + ++S+ + +Y + + AR+VFDEM
Sbjct: 164 TLSSAVKACFELGEVRLGRCFHGVVITHGFEWNHVISSTLAYMYGVNKEPVDARRVFDEM 223
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKG 119
E +++ W+A++S + + AL F MH L+P+ F + ++AC ++ L +G
Sbjct: 224 PEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQG 283
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
++IH + G S V +SL+ MY K G +A V+ N+VS++AL+ G+ +N
Sbjct: 284 KEIHGKLITNGIGSNVVVESSLLDMYGKSGSVREARQVFNGMPRKNIVSWSALLGGYCQN 343
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ EK E+F+ M + D + F L+ C+ +R G +H V+ N V
Sbjct: 344 GEHEKAIEMFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVE 399
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+ ++ LY K I A + + + +++I+WN ++A + E+ +S F +M G+
Sbjct: 400 SALIDLYGKSGCIDYASRVYSKMSVRNMITWNAMLSALAQNGRGEEAVSFFNDMVKK-GI 458
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIR-MRLNQDVGVGNALVNMYAKCGLISCSY 358
+PD +F ++L AC V+ G+ A + + + + ++++ + GL +
Sbjct: 459 KPDYISFIAVLTACGHTGLVEEGRNYFALMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAE 518
Query: 359 KLFNEMLHRNVVS-WNTIIAAHA 380
L + RN S W ++ A
Sbjct: 519 NLLDRAECRNDASLWGVLLGPCA 541
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 143/281 (50%), Gaps = 3/281 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++L C + L+QG +H ++ GI +V+V + +L++Y K G + AR+VF+ M
Sbjct: 266 TFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKSGSVREARQVFNGM 325
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
+N+VSWSA++ G+ Q GEH A+E F +M + Y F + + ACAG+ ++ G++IH
Sbjct: 326 PRKNIVSWSALLGGYCQNGEHEKAIEMFREME-EKDLYCFGTVLKACAGLAAVRLGKEIH 384
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
++ G V ++LI +Y K G A VY + N++++NA+++ +N + E
Sbjct: 385 GQYVRRGCFGNVIVESALIDLYGKSGCIDYASRVYSKMSVRNMITWNAMLSALAQNGRGE 444
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC-KLESNPFVGNTI 242
+ F M+++G+ PD SF L C + + +G L K ++ + +
Sbjct: 445 EAVSFFNDMVKKGIKPDYISFIAVLTACGHTGLVEEGRNYFALMAKSYGIKPGTEHYSCM 504
Query: 243 MALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCAD 282
+ L + L EAE E D W + C+ D
Sbjct: 505 IDLLGRAGLFEEAENLLDRAECRNDASLWGVLLGPCAANTD 545
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 320/577 (55%), Gaps = 10/577 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L + AL G +HA +K G + V V N ++N+YAKCG + A+ VF+ M
Sbjct: 203 TFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWM 262
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQ 120
R++VSW+ +++G L AL+ F + + +A+ I CA ++ L +
Sbjct: 263 ETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALAR 322
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG-EAFEPNLVSFNALIAGFVEN 179
Q+H+ LK G+ V +L Y K G +DAL ++ N+VS+ A+I+G ++N
Sbjct: 323 QLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQN 382
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+F M ++P+ F+++ L+ S + I H +K + PFVG
Sbjct: 383 GDIPLAVVLFSRMREDRVMPNEFTYSAMLK---ASLSILPPQI-HAQVIKTNYQHIPFVG 438
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++A YSKF +A F++IE+KD+++W+ ++ + D E +F +M+ G+
Sbjct: 439 TALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAI-QGI 497
Query: 300 RPDDFTFASILAACA-GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+P++FT +S++ ACA A V G+Q HA I+ R + + V +ALV+MY++ G I +
Sbjct: 498 KPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQ 557
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+F R++VSWN++I+ +A H A++ F QM+A+GI+ D VTF+ ++ C H G
Sbjct: 558 IVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNG 617
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV EG+ YF+SM + + I+P +EH+ C++DL RAGKL E + P +V TL
Sbjct: 618 LVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTL 677
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L ACR+ ++V +G+ A +L L+P +S YVLLSN+YA+ G W + RK++ +K
Sbjct: 678 LGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVK 737
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KE S I+++ F + SH +I LK +
Sbjct: 738 KEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVI 774
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 220/465 (47%), Gaps = 16/465 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++S +L C G LH +K G + +V ++++Y KCG + +VF+
Sbjct: 101 TLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEG 160
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
M ++N+V+W+++++G A H + F +M + PN + FAS +SA A +L G
Sbjct: 161 MPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLG 220
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
Q++HA S+KFG S FV NSL++MY K G DA V+ ++VS+N L+AG N
Sbjct: 221 QRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLN 280
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ + ++F + ++A +++C+ L LH +K G
Sbjct: 281 ECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFH---LTG 337
Query: 240 NTIMALYSKFNLIGEAEKAFRLIE----EKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
N + AL ++ GE A + ++++SW I+ C D + +F M
Sbjct: 338 NVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMRE 397
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
D V P++FT++++L A + QIHA +I+ VG AL+ Y+K G
Sbjct: 398 DR-VMPNEFTYSAMLKASLSILP----PQIHAQVIKTNYQHIPFVGTALLASYSKFGSTE 452
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ +F + ++VV+W+ +++ HA A LF +M GIKP+ T ++ AC
Sbjct: 453 DALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACA 512
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
+ F+++ Y I + L+ + R G + A+
Sbjct: 513 CPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQ 557
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 181/365 (49%), Gaps = 9/365 (2%)
Query: 56 ARKVFDEMSERNL-VSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
AR DE+ R+ V + ++ + + G L L+ FS +L + + + AC
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACR 110
Query: 112 GIQSLVKGQQIHAYSLKFGY--ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSF 169
+ V G+Q+H +K G+ +S G SL+ MYMK G + + V+ + N+V++
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVS-AGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTW 169
Query: 170 NALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK 229
+L+ G Q + +F M +G+ P+ F+FA L + L G +H +VK
Sbjct: 170 TSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK 229
Query: 230 CKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSV 289
S+ FV N++M +Y+K L+ +A+ F +E +D++SWNT +A + L +
Sbjct: 230 FGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQL 289
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
F E G + T+A+++ CA L + +Q+H+ +++ + V AL + Y+
Sbjct: 290 FHESRATMG-KMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYS 348
Query: 350 KCGLISCSYKLFNEML-HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
KCG ++ + +F+ RNVVSW II+ + A+ LF +M+ + P+ T+
Sbjct: 349 KCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYS 408
Query: 409 GLLTA 413
+L A
Sbjct: 409 AMLKA 413
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 146/276 (52%), Gaps = 5/276 (1%)
Query: 186 FEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF-VGNTIMA 244
+ F + R G+L D + + L+ C D G LHCL VKC + G +++
Sbjct: 84 LDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVD 143
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y K + E + F + +K++++W + + C+H + + +++F M + G+ P+ F
Sbjct: 144 MYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAE-GIWPNPF 202
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
TFAS+L+A A ++ G+++HA ++ V V N+L+NMYAKCGL+ + +FN M
Sbjct: 203 TFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWM 262
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC-NHAGLVKEG 423
R++VSWNT++A + AL+LF + +AT K T+ ++ C N L
Sbjct: 263 ETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALAR 322
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+ + ++ + ++ ++ T L D + G+L +A
Sbjct: 323 QLHSCVLKHGFHLTGNV--MTALADAYSKCGELADA 356
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 195/566 (34%), Positives = 305/566 (53%), Gaps = 5/566 (0%)
Query: 13 SKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWS 72
+ T AL+ +H + G D+ + N ++++YAKCG + AR VFD M +R+++SW+
Sbjct: 434 ASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWN 493
Query: 73 AMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKF 129
AM+ G Q G A F QM L+P+ + S ++ +L ++H ++++
Sbjct: 494 AMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVET 553
Query: 130 GYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVF 189
G S VG++ I MY++ G DA L++ + ++ ++NA+I G + + + +F
Sbjct: 554 GLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLF 613
Query: 190 KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF 249
M R+G +PD +F L L +H L + VGN ++ YSK
Sbjct: 614 LQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGL-VDLRVGNALVHTYSKC 672
Query: 250 NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
+ A++ F + E+++ +W I + S F +M + G+ PD T+ SI
Sbjct: 673 GNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLRE-GIVPDATTYVSI 731
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
L+ACA +++ K++H H + L D+ VGNALV+MYAKCG I + +F++M+ R+V
Sbjct: 732 LSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDV 791
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNS 429
SW +I A H G AL F +MK+ G KP+ +++ +LTAC+HAGLV EG F S
Sbjct: 792 FSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLS 851
Query: 430 MEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVV 489
M + YGI P +EH+TC++DLLGRAG L EAE + P+ D G LL AC ++
Sbjct: 852 MTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLE 911
Query: 490 IGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQ 549
+ E AK+ L+P + S YVLLSN+YA+ G W R M++ G++KEP S IEV
Sbjct: 912 MAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVD 971
Query: 550 GTFEKFTVAEFSHSKIGEINYMLKTL 575
F V + SH + EI L L
Sbjct: 972 NRIHSFVVGDTSHPESKEIYAQLNDL 997
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 225/414 (54%), Gaps = 6/414 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S ++L C K + + +H ++K G++ ++ V+N +L +Y +CG++ AR+VFD++
Sbjct: 120 SYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKL 179
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
++N+ W+ MI G+ + G A+ + +M PNE + S + AC +L G+
Sbjct: 180 LKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGK 239
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+IHA+ ++ G+ S V +L++MY+K G DA L++ + E N++S+ +I G
Sbjct: 240 KIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYG 299
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ ++ F +F M R+G +P+ +++ L + + L +H V L + VGN
Sbjct: 300 RGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGN 359
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y+K I +A F + E+D+ SW I + ++ S+F +M + G
Sbjct: 360 ALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRN-GCL 418
Query: 301 PDDFTFASIL--AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
P+ T+ SIL +A A ++++ K +H H D+ +GNAL++MYAKCG I +
Sbjct: 419 PNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDAR 478
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
+F+ M R+V+SWN ++ A + G A +F QM+ G+ PDS T++ LL
Sbjct: 479 LVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLN 532
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 139/459 (30%), Positives = 238/459 (51%), Gaps = 8/459 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L+ + AL+ +H+ + G+ D+ V N ++++YAK G + AR VFD M+ER
Sbjct: 325 SILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTER 384
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAI--SACAGIQSLVKGQQ 121
++ SW+ MI G Q G A F QM LPN + S + SA A +L +
Sbjct: 385 DIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKV 444
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H ++ + G+ S +GN+LI MY K G DA LV+ + +++S+NA++ G +N
Sbjct: 445 VHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGC 504
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ F VF M ++GL+PD ++ L ++ L +H V+ L S+ VG+
Sbjct: 505 GHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSA 564
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+ +Y + I +A F + + + +WN I + + LS+F +M + G P
Sbjct: 565 FIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQRE-GFIP 623
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D TF +IL+A +++ K++H+H L D+ VGNALV+ Y+KCG + + ++F
Sbjct: 624 DATTFINILSANVDEEALEWVKEVHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQVF 682
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
++M+ RNV +W +I A H G A F QM GI PD+ T++ +L+AC G ++
Sbjct: 683 DDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALE 742
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
+ N + G+ D+ L+ + + G + +A
Sbjct: 743 WVKEVHNH-AVSAGLVSDLRVGNALVHMYAKCGSIDDAR 780
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 153/299 (51%), Gaps = 6/299 (2%)
Query: 166 LVSFNALIAGFVENQQ----PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
LV NA + G E + + K+ ++QG+ D FS+ L+ C D+
Sbjct: 79 LVCANASVDGAAEQTHNVITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAK 138
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
+H +K +E N +V N ++ +Y + + A + F + +K++ W T I +
Sbjct: 139 QVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYG 198
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
E + V+ +M + G +P++ T+ SIL AC +++ GK+IHAH+I+ DV V
Sbjct: 199 HAEDAMRVYDKMRQECG-QPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVE 257
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
ALVNMY KCG I + +F++M+ RNV+SW +I A++ G A LF QM+ G
Sbjct: 258 TALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFI 317
Query: 402 PDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
P+S T++ +L A AG + E +S G++ D+ L+ + ++G + +A
Sbjct: 318 PNSYTYVSILNANASAGAL-EWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDAR 375
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 5/181 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + S+L C+ T AL+ +H + G+ D+ V N ++++YAKCG + AR VFD
Sbjct: 725 ATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFD 784
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
+M ER++ SW+ MI G Q G L AL+FF +M PN Y + + ++AC+ + +
Sbjct: 785 DMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDE 844
Query: 119 G-QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDA-LLVYGEAFEPNLVSFNALIAGF 176
G +Q + + +G ++ + + G +A L + EP+ + AL+
Sbjct: 845 GRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGAC 904
Query: 177 V 177
V
Sbjct: 905 V 905
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 196/615 (31%), Positives = 331/615 (53%), Gaps = 50/615 (8%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGK---MILARKVFDEMS 64
LL C K+ +QG+ +HA + G+ + + +++ ++ G + +R +F ++
Sbjct: 15 LLESC---KSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQID 71
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHL----LPNEYIFASAISACAGIQSLVKGQ 120
NL W+ MI G+ ++ A+ + M PN + F +++CA + SL G
Sbjct: 72 CPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGH 131
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H++ +K G+ S FV N+LI +Y G + A ++ E+ +LVS+N +I G+ E
Sbjct: 132 EVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVN 191
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC--KLESNPFV 238
QPE +F M G+LPD F+F +CSV N+ G +H K ++SN +
Sbjct: 192 QPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILL 251
Query: 239 GNTIMALYSKFNLIGEAEKAFRLI--------------------------------EEKD 266
+ I+ +Y+K LI AE+ F + E+D
Sbjct: 252 KSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERD 311
Query: 267 LISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI- 325
+ISW I+ S + L +FKEM G++PD+ T ++L+ACA L + GK++
Sbjct: 312 VISWTAMISGYSQAGQCSEALELFKEMEA-LGIKPDEVTLVAVLSACARLGAFDLGKRLY 370
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS---WNTIIAAHANH 382
H ++ NQ+ + A+++MYAKCG I + ++F + +N+ + +N++IA A H
Sbjct: 371 HQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRR-VGKNMKTGFVFNSMIAGLAQH 429
Query: 383 RLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEH 442
LG +A+ +F ++ +TG+KPD VTF+G+L AC H+GL++EG+ F SM YGI P +EH
Sbjct: 430 GLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEH 489
Query: 443 FTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQ 502
+ C++DLLGR G L EA + +K P + ++ LLSACR +V IGE ++L ++
Sbjct: 490 YGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEME 549
Query: 503 PTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
+ YVLLSN+ A W + RK+++D G++K P +S IE+ G +F ++ SH
Sbjct: 550 AQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSH 609
Query: 563 SKIGEINYMLKTLSL 577
+ EI MLK +++
Sbjct: 610 PQGKEIELMLKDMAM 624
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 200/612 (32%), Positives = 318/612 (51%), Gaps = 52/612 (8%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C + +++ G S HA G +V V N ++ +Y++CG + ARKVFDEM ++VSW
Sbjct: 137 CGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSW 196
Query: 72 SAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQQIHAYSL 127
+++I + + G+ +ALE FS+M P++ + + CA + + G+Q H +++
Sbjct: 197 NSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAV 256
Query: 128 KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF----------- 176
FVGN L+ MY K G +A V+ ++VS+NA++AG+
Sbjct: 257 TSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVR 316
Query: 177 -VENQQPEK--------------------GFE---VFKLMLRQGLLPDRFSFAGGLEICS 212
E Q EK G+E V + ML G+ P+ + L C+
Sbjct: 317 LFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA 376
Query: 213 VSNDLRKGMILHCLTVKCKLE-------SNPFVGNTIMALYSKFNLIGEAEKAFRLI--E 263
L G +HC +K ++ V N ++ +Y+K + A F + +
Sbjct: 377 SVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPK 436
Query: 264 EKDLISWNTFIAACSHCADYEKGLSVFKEM-SNDHGVRPDDFTFASILAACAGLASVQHG 322
E+D+++W I S D K L + EM D RP+ FT + L ACA LA++ G
Sbjct: 437 ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIG 496
Query: 323 KQIHAHLIRMRLNQ-DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN 381
KQIHA+ +R + N + V N L++MYAKCG I + +F+ M+ +N V+W +++ +
Sbjct: 497 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGM 556
Query: 382 HRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIE 441
H G AL +FE+M+ G K D VT + +L AC+H+G++ +G YFN M+ +G+SP E
Sbjct: 557 HGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPE 616
Query: 442 HFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHL 501
H+ CL+DLLGRAG+L A ++ P+ P+V LLS CR+ V +GE AK++ L
Sbjct: 617 HYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITEL 676
Query: 502 QPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIE-VQGTFEKFTVAEF 560
Y LLSN+YA+ G W DV R +++ G+KK P S +E ++GT F V +
Sbjct: 677 ASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGT-TTFFVGDK 735
Query: 561 SHSKIGEINYML 572
+H EI +L
Sbjct: 736 THPHAKEIYQVL 747
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/498 (25%), Positives = 226/498 (45%), Gaps = 52/498 (10%)
Query: 14 KTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM--SERNLVSW 71
K K + Q +H +L GI + +++H+++ Y G + A + S+ + W
Sbjct: 37 KCKTISQVKLIHQKLLSFGILT-LNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHW 95
Query: 72 SAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
+++I + G L F MH L P+ Y F AC I S+ G HA S
Sbjct: 96 NSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRV 155
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
G+ S FVGN+L++MY + G SDA V+ E ++VS+N++I + + +P+ E+
Sbjct: 156 TGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEM 215
Query: 189 FKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYS 247
F M + G PD + L C+ G H V ++ N FVGN ++ +Y+
Sbjct: 216 FSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYA 275
Query: 248 KFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH---------- 297
KF ++ EA F + KD++SWN +A S +E + +F++M +
Sbjct: 276 KFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSA 335
Query: 298 ------------------------GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR 333
G++P++ T S+L+ CA + ++ HGK+IH + I+
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395
Query: 334 LN-------QDVGVGNALVNMYAKCGLISCSYKLFNEM--LHRNVVSWNTIIAAHANHRL 384
++ + V N L++MYAKC + + +F+ + R+VV+W +I ++ H
Sbjct: 396 MDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455
Query: 385 GGSALKLFEQM--KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEH 442
AL+L +M + +P++ T L AC + G+ + + +
Sbjct: 456 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFV 515
Query: 443 FTCLIDLLGRAGKLLEAE 460
CLID+ + G + +A
Sbjct: 516 SNCLIDMYAKCGDIGDAR 533
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 195/409 (47%), Gaps = 21/409 (5%)
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAY 125
R LV+ A H L + FS L I I C I + + IH
Sbjct: 3 RRLVTLRAAAKSHQH-----LKVSLFSTSAL----EITPPFIHKCKTISQV---KLIHQK 50
Query: 126 SLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPN---LVSFNALIAGFVENQQP 182
L FG +++ + LIS Y+ +G S A+ + F P+ + +N+LI + N +
Sbjct: 51 LLSFGILTLNLTSH-LISTYISLGCLSHAVSLL-RRFPPSDAGVYHWNSLIRSYGNNGRA 108
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
K F LM PD ++F + C + +R G H L+ SN FVGN +
Sbjct: 109 NKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNAL 168
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+A+YS+ + +A K F + D++SWN+ I + + + L +F +M+N+ G RPD
Sbjct: 169 VAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPD 228
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
D T ++L CA + + GKQ H + + Q++ VGN LV+MYAK G++ + +F+
Sbjct: 229 DITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFS 288
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
M ++VVSWN ++A ++ A++LFEQM+ IK D VT+ ++ GL E
Sbjct: 289 NMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYE 348
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE---YTKKFPL 468
M + GI P+ ++ G L+ +E Y K+P+
Sbjct: 349 ALGVCRQMLSS-GIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPM 396
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 115/506 (22%), Positives = 213/506 (42%), Gaps = 94/506 (18%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L C+ G H + + ++ V N ++++YAK G M A VF M
Sbjct: 231 TLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNM 290
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---------------------------- 95
+++VSW+AM++G+ Q G A+ F QM
Sbjct: 291 PVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEAL 350
Query: 96 ----------LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKF-------GYASISFVG 138
+ PNE S +S CA + +L+ G++IH Y++K+ G+ + V
Sbjct: 351 GVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVI 410
Query: 139 NSLISMYMKVGYSSDALLVYG--EAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
N LI MY K A ++ E ++V++ +I G+ ++ K E+ M +
Sbjct: 411 NQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470
Query: 197 --LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP-FVGNTIMALYSKFNLIG 253
P+ F+ + L C+ L G +H ++ + + P FV N ++ +Y+K IG
Sbjct: 471 CQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIG 530
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
+A F + EK+ ++W + + E+ L +F+EM G + D T +L AC
Sbjct: 531 DARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRI-GFKLDGVTLLVVLYAC 589
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGN----ALVNMYAKCGLISCSYKLFNEMLHRNV 369
+ + G + + RM+ + V G LV++ + G ++
Sbjct: 590 SHSGMIDQGME---YFNRMKTDFGVSPGPEHYACLVDLLGRAGRLN-------------- 632
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNS 429
+AL+L E+M ++P V ++ LL+ C G V+ GE + +
Sbjct: 633 -----------------AALRLIEEMP---MEPPPVVWVALLSCCRIHGKVELGE--YAA 670
Query: 430 MEKTYGISPDIEHFTCLIDLLGRAGK 455
+ T S + +T L ++ AG+
Sbjct: 671 KKITELASNNDGSYTLLSNMYANAGR 696
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 204/582 (35%), Positives = 315/582 (54%), Gaps = 14/582 (2%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+SS+L CS ++L G +H V+K G+ + + + ++ +Y KCG + A +F+ +
Sbjct: 215 VSSILS-CSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSIL 273
Query: 65 E-----RNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSL 116
+ RN V W+ MISG+ G AL F +M + P+ S S C+ +
Sbjct: 274 DKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDI 333
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G+QIH KFG + V +L+ MY+K G L ++ + NL+ ++A+I+
Sbjct: 334 AFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNC 393
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
++ P K E+F + L D L CS +GM +H L K S+
Sbjct: 394 AQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDV 453
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIA--ACSHCADYEKGLSVFKEMS 294
FVG+ ++ LY+K +G ++K F + +KDL+SWN I+ A CAD + L F++M
Sbjct: 454 FVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECAD--EALKAFRDMQ 511
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
+ +RP+ T A IL+ CA L+ + K++H +LIR L V V N+L+ YAKCG I
Sbjct: 512 LEE-IRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDI 570
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ S F +M RN VSWN+II H + LF++M A+GIKPD VTF +L+AC
Sbjct: 571 NSSLYTFEKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSAC 630
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
+HAG V EG YF SM + + + P +E +TC++DLLGRAG L +A + P D +
Sbjct: 631 SHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRI 690
Query: 475 LGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKD 534
G+LL +C+ D ++ E +A +F L P++ VLL+NLY + G + + R +KD
Sbjct: 691 WGSLLGSCKNHGDEILAEIVANHIFKLVPSSVGYRVLLANLYENLGKGREGSKVRSEIKD 750
Query: 535 SGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
GLKK+P S IEV F F + SHS+ EI +++L+
Sbjct: 751 MGLKKKPGCSWIEVDNNFHIFIAGDRSHSQSDEIYAAVESLT 792
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 200/424 (47%), Gaps = 21/424 (4%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
F I A G+ + KG+QIH + LK G V NSL++MY K G DA+ ++ +
Sbjct: 112 FPCLIKAFGGLCDVYKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMP 171
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGM 221
E +LVS+N +I+GF ++ + F+ M+ + G+ P+R + + CS L G
Sbjct: 172 EVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGR 231
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS-----WNTFIAA 276
+H + VK L+ ++ ++++ +Y K I AE F I +KD + WN I+
Sbjct: 232 EIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISG 291
Query: 277 CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
+ + L +F +M G++PD T S+ + C+ + GKQIH + + L
Sbjct: 292 YVSNGCFSQALLLFIKMMV-WGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKN 350
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
++ V AL++MY KCG + K+F + N++ W+ +I+ A AL+LF + K
Sbjct: 351 NIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFK 410
Query: 397 ATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
DS + +L AC+ L EG + + G D+ + L+DL + +
Sbjct: 411 MEDGLADSGILVAVLRACSSLTLKPEG-MQIHGLATKMGFVSDVFVGSALVDLYAKCRDM 469
Query: 457 LEAEEYTKKFPL---GQDPIVLGTLLSACRLRRDVVIGERLAK----QLFHLQPTTTSPY 509
Y+KK L +D + L+S +D E L QL ++P T +
Sbjct: 470 ----GYSKKVFLRLSQKDLVSWNALISG--YAQDECADEALKAFRDMQLEEIRPNTVTIA 523
Query: 510 VLLS 513
+LS
Sbjct: 524 CILS 527
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 154/303 (50%), Gaps = 20/303 (6%)
Query: 167 VSF-NALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA-------GGLEICSVSNDLR 218
VSF N +I + E+ + V+ ML G+ + F + GGL C D+
Sbjct: 73 VSFANNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGL--C----DVY 126
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
KG +H +K + + V N+++ +Y K ++ +A + F + E DL+SWNT I+
Sbjct: 127 KGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQ 186
Query: 279 HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
DY + L F+ M + G+ P+ S + +C+ L S+ HG++IH +++ L+ +
Sbjct: 187 KSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEE 246
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEML-----HRNVVSWNTIIAAHANHRLGGSALKLFE 393
+ ++L+ MY KCG I + +FN +L RN V WN +I+ + ++ AL LF
Sbjct: 247 YLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFI 306
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 453
+M GIKPD T + L + C+ + + G+ + K +G+ +I T L+D+ +
Sbjct: 307 KMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFK-FGLKNNIRVETALLDMYLKC 365
Query: 454 GKL 456
G +
Sbjct: 366 GDM 368
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I+ +L C+ + +H +++ G+ V+VSN ++ YAKCG + + F++M
Sbjct: 521 TIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKM 580
Query: 64 SERNLVSWSAMISG---HHQAGEHLLALEFFSQMHLLPNEYIFASAISACA 111
ERN VSW+++I G H + E ++ + + P+ F + +SAC+
Sbjct: 581 PERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACS 631
>gi|357508205|ref|XP_003624391.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499406|gb|AES80609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 709
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 189/539 (35%), Positives = 306/539 (56%), Gaps = 6/539 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+LL ++ +G ++HA +K I + + NH+LN+Y KC + A ++FDEM ER
Sbjct: 10 NLLRSYAQDSNFLKGTAIHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSALQLFDEMPER 69
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQQI 122
N+VSWS++++G G AL FS MH + PNE+ F SA+ AC+ +++ + QI
Sbjct: 70 NVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVTQAYQI 129
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
++ ++ G F+ N+ ++ ++ G ++AL ++ + + V++N ++ G++E
Sbjct: 130 YSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGGYLEFSS- 188
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E+ ++ M R+G+ PD F+FA L + + L+ GM +H V+ + VGN++
Sbjct: 189 EQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYGDDICVGNSL 248
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y K + E KAF I KD+ SW C + L+V +M GV+P+
Sbjct: 249 VDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKK-MGVKPN 307
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
FT A+ L ACA LAS++ GKQ H I++ + DV V NAL++MYAKCG + ++ +F
Sbjct: 308 KFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVFR 367
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
R+VVSW T+I A A + G AL++F++MK T ++P+ +TFI +L AC+ G V E
Sbjct: 368 STNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNYITFICVLYACSQGGFVDE 427
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G Y +SM+K YGI P +H+ C++ +LGRAG + EA+E + P V TLLSAC
Sbjct: 428 GWKYLSSMDKDYGIIPGEDHYICMVSILGRAGLIKEAKELILRMPFHPGVRVWQTLLSAC 487
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
++ DV G+ A+ S YVLLSN+ A W V R++++ +KK P
Sbjct: 488 QIHGDVETGKLAAEHAIKHDKNDPSSYVLLSNMLAETSNWDCVVSLRELMETRNVKKVP 546
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 183/356 (51%), Gaps = 4/356 (1%)
Query: 100 EYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG 159
E ++ + + + A + +KG IHAY +K F+ N L++MY+K + AL ++
Sbjct: 5 EELYINLLRSYAQDSNFLKGTAIHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSALQLFD 64
Query: 160 EAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL-PDRFSFAGGLEICSVSNDLR 218
E E N+VS+++++ G V N +F M R+G + P+ F+F L+ CS+S ++
Sbjct: 65 EMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVT 124
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
+ ++ L V+ LE N F+ N + + + EA + F +D ++WNT +
Sbjct: 125 QAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGG-- 182
Query: 279 HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
+ + + VF N GV+PD+FTFAS L A ++S++ G Q+HA L+R D+
Sbjct: 183 YLEFSSEQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYGDDI 242
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
VGN+LV+MY K + +K F+E+ H++V SW + AL + +MK
Sbjct: 243 CVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKM 302
Query: 399 GIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
G+KP+ T L AC ++EG+ F+ + G D+ L+D+ + G
Sbjct: 303 GVKPNKFTLATALNACACLASMEEGKQ-FHGLRIKLGSDVDVCVDNALLDMYAKCG 357
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 147/304 (48%), Gaps = 10/304 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S L + +L+ G+ +HA +++ G D+ V N ++++Y K K+ K FDE+
Sbjct: 209 TFASALTGLATISSLKMGMQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEI 268
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
+++ SW+ M G Q GE +AL ++M + PN++ A+A++ACA + S+ +G+
Sbjct: 269 PHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGK 328
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q H +K G V N+L+ MY K G A V+ ++VS+ +I +N
Sbjct: 329 QFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVFRSTNSRSVVSWTTMIMACAQNG 388
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVG 239
QP + ++F M + P+ +F L CS + +G L + +
Sbjct: 389 QPGEALQIFDEMKETSVEPNYITFICVLYACSQGGFVDEGWKYLSSMDKDYGIIPGEDHY 448
Query: 240 NTIMALYSKFNLIGEA-EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++++ + LI EA E R+ + W T ++AC D E G +++ +H
Sbjct: 449 ICMVSILGRAGLIKEAKELILRMPFHPGVRVWQTLLSACQIHGDVETG-----KLAAEHA 503
Query: 299 VRPD 302
++ D
Sbjct: 504 IKHD 507
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 94/175 (53%), Gaps = 3/175 (1%)
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
+ ++L + A ++ G IHA+ I+ + + + N L+NMY KC ++ + +LF+EM
Sbjct: 8 YINLLRSYAQDSNFLKGTAIHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSALQLFDEMP 67
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG-IKPDSVTFIGLLTACNHAGLVKEGE 424
RNVVSW++++ ++ AL LF M G +KP+ TF+ L AC+ + V +
Sbjct: 68 ERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVTQAY 127
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
++ + ++ G+ ++ + L R GKL EA + + P+ +D + T++
Sbjct: 128 QIYSLVVRS-GLECNVFLLNAFLTALVRNGKLTEALQIFETSPI-RDTVTWNTMM 180
>gi|297834550|ref|XP_002885157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330997|gb|EFH61416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 655
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 193/549 (35%), Positives = 304/549 (55%), Gaps = 9/549 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L C+ +A++ G +H+ V D+ V +++ YAKCG++ +A KVFDEM +R+
Sbjct: 109 VLKACAGLRAIEDGKLIHSHVKCSNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRD 168
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQQIH 123
+V+W+AMISG + F M L PN A +L +G+ +H
Sbjct: 169 IVAWNAMISGFSLHCCLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVH 228
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
Y + G+++ V ++ +Y K A V+ F+ N V+++A+I G+VEN+ +
Sbjct: 229 GYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDSDFKKNEVTWSAMIGGYVENEMIK 288
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEI--CSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ EVF ML + A GL + C+ DL G +HC +K + VGNT
Sbjct: 289 EAGEVFLQMLVNADMAMVTPVAIGLILMGCARFGDLSGGRCVHCYAIKAGFILDLTVGNT 348
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+++ Y+K+ + +A + F I KD++S+N+ I+ C E+ +F +M + G+RP
Sbjct: 349 VISFYAKYGSLCDAFRQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFHQMKSS-GIRP 407
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D T IL AC+ LA++ HG H + + + + NAL++MY KCG + + ++F
Sbjct: 408 DITTLLGILTACSNLAALGHGSSCHGYCVVNGYAVNTSICNALMDMYTKCGKLYVAKRVF 467
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ M R++VSWNT++ H LG AL LF M+ TG+ PD VT + +L+AC+H+GLV
Sbjct: 468 DTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQDTGVHPDEVTLLAILSACSHSGLVD 527
Query: 422 EGEAYFNSMEK-TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG+ FNSM + + + P ++H+ C+ DLL RAG L EA ++ K P D VLGTLLS
Sbjct: 528 EGKQLFNSMSRGDFNVIPRLDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLS 587
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC ++V +G ++K++ L TT S VLLSN Y++ W D A R K SGL K
Sbjct: 588 ACWTYKNVELGNEVSKKMQSLGETTES-LVLLSNTYSAAERWEDAAKIRMTQKKSGLLKT 646
Query: 541 PSYSMIEVQ 549
P YS ++V
Sbjct: 647 PGYSWVDVD 655
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 226/464 (48%), Gaps = 13/464 (2%)
Query: 8 LLHHCSKTKALQQGISLHAAVLK--MGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
LL C +++ L G +H +LK + + ++ N + LYA C ++ LAR VFDE+
Sbjct: 5 LLESCIRSRNLILGQIIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDEIPH 63
Query: 66 R--NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
N ++W MI + G AL+ + +M + P ++ + + ACAG++++ G+
Sbjct: 64 PRINPIAWDLMIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIEDGK 123
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IH++ +A+ +V +L+ Y K G A+ V+ E + ++V++NA+I+GF +
Sbjct: 124 LIHSHVKCSNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFSLHC 183
Query: 181 QPEKGFEVFKLMLRQGLL-PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+F M R L P+ + G + LR+G +H + ++ V
Sbjct: 184 CLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVK 243
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM-SNDHG 298
I+ +Y+K I A + F +K+ ++W+ I ++ VF +M N
Sbjct: 244 TGILDVYAKSKCIIYARRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQMLVNADM 303
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
IL CA + G+ +H + I+ D+ VGN +++ YAK G + ++
Sbjct: 304 AMVTPVAIGLILMGCARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYGSLCDAF 363
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC-NHA 417
+ F E+ +++VS+N++I+ + + +LF QMK++GI+PD T +G+LTAC N A
Sbjct: 364 RQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTACSNLA 423
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
L + + Y ++ I L+D+ + GKL A+
Sbjct: 424 ALGHGSSCHGYCVVNGYAVNTSI--CNALMDMYTKCGKLYVAKR 465
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 177/390 (45%), Gaps = 15/390 (3%)
Query: 102 IFASAISACAGIQSLVKGQQIHAYSLKFGYA-SISFVGNSLISMYMKVGYSSDALLVYGE 160
+F + +C ++L+ GQ IH + LK S S V +L +Y A V+ E
Sbjct: 1 MFLRLLESCIRSRNLILGQIIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDE 60
Query: 161 AFEP--NLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLR 218
P N ++++ +I +V N EK +++ ML G+ P +F++ L+ C+ +
Sbjct: 61 IPHPRINPIAWDLMIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIE 120
Query: 219 KGMILHCLTVKC-KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC 277
G ++H VKC ++ +V ++ Y+K + A K F + ++D+++WN I+
Sbjct: 121 DGKLIHS-HVKCSNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGF 179
Query: 278 S-HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
S HC + +F +M + P+ T + A +++ GK +H + RM +
Sbjct: 180 SLHCC-LTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSN 238
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
D+ V ++++YAK I + ++F+ +N V+W+ +I + + + A ++F QM
Sbjct: 239 DLVVKTGILDVYAKSKCIIYARRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQML 298
Query: 397 ATG----IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
+ P ++ I L C G + G K G D+ +I +
Sbjct: 299 VNADMAMVTPVAIGLI--LMGCARFGDLSGGRCVHCYAIKA-GFILDLTVGNTVISFYAK 355
Query: 453 AGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G L +A + L +D + +L+S C
Sbjct: 356 YGSLCDAFRQFTEIGL-KDIVSYNSLISGC 384
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 139/298 (46%), Gaps = 6/298 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I +L C++ L G +H +K G D+ V N V++ YAK G + A + F E+
Sbjct: 310 AIGLILMGCARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYGSLCDAFRQFTEI 369
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+++VS++++ISG + + F QM + P+ ++AC+ + +L G
Sbjct: 370 GLKDIVSYNSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTACSNLAALGHGS 429
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
H Y + GYA + + N+L+ MY K G A V+ + ++VS+N ++ GF +
Sbjct: 430 SCHGYCVVNGYAVNTSICNALMDMYTKCGKLYVAKRVFDTMHKRDIVSWNTMLFGFGIHG 489
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG- 239
++ +F M G+ PD + L CS S + +G L + P +
Sbjct: 490 LGKEALSLFNSMQDTGVHPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRLDH 549
Query: 240 -NTIMALYSKFNLIGEA-EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
N + L ++ + EA + ++ E D+ T ++AC + E G V K+M +
Sbjct: 550 YNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNVELGNEVSKKMQS 607
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 185/578 (32%), Positives = 318/578 (55%), Gaps = 5/578 (0%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +L C+ + G+ LH V+ G+ + + N +L++Y+KCG+ A K+F
Sbjct: 239 AVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFR 298
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
MS + V+W+ MISG+ Q+G +L FF +M +LP+ F+S + + + ++L
Sbjct: 299 MMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEY 358
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+QIH Y ++ + F+ ++LI Y K S A ++ + ++V F A+I+G++
Sbjct: 359 CKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLH 418
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N E+F+ +++ + P+ + L + + L+ G LH +K ++ +
Sbjct: 419 NGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNI 478
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
G ++ +Y+K + A + F + ++D++SWN+ I C+ + + +F++M G
Sbjct: 479 GCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVS-G 537
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ D + ++ L+ACA L S GK IH +I+ L DV + L++MYAKCG + +
Sbjct: 538 ICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAM 597
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTACNHA 417
+F M +N+VSWN+IIAA NH +L LF +M + +GI+PD +TF+ ++++C H
Sbjct: 598 NVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHV 657
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
G V EG +F SM + YGI P EH+ C++DL GRAG+L EA E K P D V GT
Sbjct: 658 GDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGT 717
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL ACRL ++V + E + +L L P+ + YVL+SN +A+ W V R ++K+ +
Sbjct: 718 LLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREV 777
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+K P YS IE+ F + +H + I +L +L
Sbjct: 778 QKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSL 815
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/478 (25%), Positives = 234/478 (48%), Gaps = 6/478 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
L+ C K + L V +G+ + V++ ++ Y + GK+ + K+FD + +++
Sbjct: 144 LVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKD 203
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
V W+ M++G+ + G ++ FS M + PN F +S CA + G Q+H
Sbjct: 204 CVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHG 263
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ G + NSL+SMY K G DA ++ + V++N +I+G+V++ E+
Sbjct: 264 LVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEE 323
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
F M+ G+LPD +F+ L S +L +HC ++ + + F+ + ++
Sbjct: 324 SLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALID 383
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
Y K + A+ F D++ + I+ H Y L +F+ + + P++
Sbjct: 384 AYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK-ISPNEI 442
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T SIL L +++ G+++H +I+ + +G A+++MYAKCG ++ +Y++F +
Sbjct: 443 TLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL 502
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
R++VSWN++I A +A+ +F QM +GI D V+ L+AC + G+
Sbjct: 503 SKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGK 562
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
A M K + ++ D+ + LID+ + G L A K ++ + ++++AC
Sbjct: 563 AIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAAC 618
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/488 (23%), Positives = 234/488 (47%), Gaps = 10/488 (2%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
+ + +S LL CS L+QG +HA ++ I D +L +YA CG K+F
Sbjct: 34 IPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMF 93
Query: 61 DEMSER--NLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQS 115
+ R ++ W+++IS + G AL F+ +M P+ F + AC +++
Sbjct: 94 YRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKN 153
Query: 116 LVKGQQIHAYSL-KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIA 174
KG + ++ G FV +SLI Y++ G ++ + + V +N ++
Sbjct: 154 F-KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLN 212
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
G+ + + + F +M + P+ +F L +C+ + G+ LH L V ++
Sbjct: 213 GYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDF 272
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
+ N+++++YSK +A K FR++ D ++WN I+ E+ L+ F EM
Sbjct: 273 EGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMI 332
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
+ GV PD TF+S+L + + ++++ KQIH +++R ++ D+ + +AL++ Y KC +
Sbjct: 333 SS-GVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGV 391
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
S + +F++ +VV + +I+ + ++ L +L++F + I P+ +T + +L
Sbjct: 392 SMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVI 451
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
+K G + K G +ID+ + G++ A E ++ +D +
Sbjct: 452 GILLALKLGRELHGFIIKK-GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVS 509
Query: 475 LGTLLSAC 482
++++ C
Sbjct: 510 WNSMITRC 517
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 196/578 (33%), Positives = 319/578 (55%), Gaps = 12/578 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+IS+LL C + L+ G LH + K G++ +V V N +L++YA+ G A VF M
Sbjct: 454 TISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTM 513
Query: 64 SERNLVSWSAMISGHHQAGEH----LLALEFFSQMHLLPNEYIFASAISACAGIQSLVKG 119
R+L+SW++M++ H + G++ LL +E + N F +A+SAC ++ L
Sbjct: 514 PARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAM-NYVTFTTALSACYNLEKL--- 569
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ +HA+ + F +GN+L++MY K G +A V E ++V++NALI G ++
Sbjct: 570 KIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADD 629
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSND--LRKGMILHCLTVKCKLESNPF 237
+ P + F LM R+GLL + + L C +S D L+ GM +H V E + +
Sbjct: 630 KDPNATIQAFNLMRREGLLSNYITIVNLLGTC-MSPDYLLKHGMPIHAHIVVAGFELDTY 688
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V ++++ +Y++ + + F ++ K+ +WN +A +H E+ L M ND
Sbjct: 689 VQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRND- 747
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
GV D F+F+ LA L + G+Q+H+ +I++ D V NA ++MY KCG I
Sbjct: 748 GVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDV 807
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+++ R+ SWN +I+A A H A + F +M G+KPD VTF+ LL+AC+H
Sbjct: 808 FRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHG 867
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV EG YF+SM +G+ IEH C+IDLLGR+G+L EAE + K P+ + V +
Sbjct: 868 GLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRS 927
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL+AC++ ++ +G + A +LF L + S YVL SN+ AS WGDV RK ++ L
Sbjct: 928 LLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSL 987
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KK+P+ S I+++ F + + H + +I L+ L
Sbjct: 988 KKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEEL 1025
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 241/452 (53%), Gaps = 10/452 (2%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G +LHA +K IQ + +N ++N+Y+K G + A+ VFD+M +RN SW+ MISG +
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225
Query: 81 AGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG-QQIHAYSLKFGYASISF 136
G + A++FF M + P+ Y+ AS ++AC + +G +QIH Y +K G S F
Sbjct: 226 VGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVF 285
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
VG SL+ Y G S+A ++ E EPN+VS+ +L+ + +N ++ +++ + G
Sbjct: 286 VGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNG 345
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF-VGNTIMALYSKFNLIGEA 255
L+ + A + C + D G + +K L+++ V N++++++ ++ + EA
Sbjct: 346 LICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEA 405
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
+ F ++E+D ISWN+ I A +H +E+ L F M H + D T +++L AC
Sbjct: 406 SRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHP-KTDYITISALLPACGS 464
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
++ G+ +H + + L +V V N+L++MYA+ G + +F+ M R+++SWN++
Sbjct: 465 AQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSM 524
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYG 435
+A+H A+ L +M T + VTF L+AC + +K A+ +
Sbjct: 525 MASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLKIVHAFV----IHFA 580
Query: 436 ISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+ ++ L+ + G+ G + EA++ K P
Sbjct: 581 VHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMP 612
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 202/415 (48%), Gaps = 9/415 (2%)
Query: 5 ISSLLHHCSKTKALQQGI-SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
I+S++ C ++ + +G +H V+K G+ +V V +L+ Y G + A K+F+E+
Sbjct: 251 IASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEI 310
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
E N+VSW++++ + G L + + L+ A+ I C G
Sbjct: 311 EEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGY 370
Query: 121 QIHAYSLKFGYASISF-VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
QI +K G + S V NSLISM+ +A V+ E + +S+N++I N
Sbjct: 371 QILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHN 430
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ E+ F M R D + + L C + L+ G LH L K LESN V
Sbjct: 431 GRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVC 490
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N+++++Y++ +AE F + +DLISWN+ +A+ Y + + EM
Sbjct: 491 NSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKA 550
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+ TF + L+AC L + K +HA +I ++ ++ +GN LV MY K GL+ + K
Sbjct: 551 M-NYVTFTTALSACYNLEKL---KIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQK 606
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ M R+VV+WN +I HA+ + + ++ F M+ G+ + +T + LL C
Sbjct: 607 VCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTC 661
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Query: 322 GKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN 381
GK +HA ++ + Q+ N LVNMY+K G I + +F++M RN SWN +I+
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225
Query: 382 HRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIE 441
A++ F M G+ P S ++TAC+ +G + EG + G+ ++
Sbjct: 226 VGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVF 285
Query: 442 HFTCLIDLLGRAGKLLEAEEYTKKFPLGQDP-IVLGTLLSAC 482
T L+ G G + EA K F ++P IV T L C
Sbjct: 286 VGTSLLHFYGTHGSVSEA---NKLFEEIEEPNIVSWTSLMVC 324
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 194/567 (34%), Positives = 309/567 (54%), Gaps = 5/567 (0%)
Query: 13 SKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWS 72
S+ + + G+ LHA + G+ ++ V + +++LY K + LARKVFD M ER+ V W+
Sbjct: 124 SRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWN 183
Query: 73 AMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKF 129
MISG + ++ F M L + A+ ++A A +Q G I + K
Sbjct: 184 TMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKK 243
Query: 130 GYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVF 189
G S +V LIS+Y K G S +++ + +P+L+S+NA+I+G+ N + E +F
Sbjct: 244 GLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLF 303
Query: 190 KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF 249
+ +L G + + G + + N L+ ++ L++K + P V + +Y +
Sbjct: 304 RELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRL 363
Query: 250 NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
N + A + F EK L SWN I+ + ++ +S+F+EM + P+ T SI
Sbjct: 364 NEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ--LSPNPVTVTSI 421
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
L+ACA L ++ GK +H + RL +V V ALV+MYAKCG I + +LF+ M+ +NV
Sbjct: 422 LSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNV 481
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNS 429
V+WN +I + H G ALKLF +M +GI P VTF+ +L AC+H+GLV EG F+S
Sbjct: 482 VTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHS 541
Query: 430 MEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVV 489
M YG P EH+ C++D+LGRAG+L A E+ ++ PL P V G LL AC + ++
Sbjct: 542 MANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTE 601
Query: 490 IGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQ 549
+ +K+LF L P YVLLSN+Y++D + A R+++K L K P ++IE+
Sbjct: 602 MANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEID 661
Query: 550 GTFEKFTVAEFSHSKIGEINYMLKTLS 576
FT + SH + I ML+ L+
Sbjct: 662 DQQYVFTSGDRSHPQATAIFEMLEKLT 688
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 222/449 (49%), Gaps = 7/449 (1%)
Query: 17 ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMIS 76
L Q + + A ++ GI D+ + + + G + R++F+++S+ +L ++ +I
Sbjct: 26 TLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIR 85
Query: 77 GHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYA 132
G G ++ ++ + +L P+ + +A AISA + ++ G +HA+S+ G A
Sbjct: 86 GFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVA 145
Query: 133 SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM 192
S FVG++++ +Y K + A V+ E + V +N +I+GF N E VF M
Sbjct: 146 SNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDM 205
Query: 193 LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI 252
L GL D + A L + + R GM + CL K L S+ +V +++LYSK
Sbjct: 206 LDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKS 265
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
+ F I++ DLIS+N I+ + + E +++F+E+ G R + T ++
Sbjct: 266 CKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLAS-GQRVNSSTLVGLIPV 324
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
+Q + I +++ + V AL +Y + + + +LF+E +++ SW
Sbjct: 325 YLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASW 384
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
N +I+ + + L A+ LF++M + P+ VT +L+AC G + G+ + + + K
Sbjct: 385 NAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGK-WVHGLIK 442
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ + ++ T L+D+ + G ++EA +
Sbjct: 443 SERLESNVYVSTALVDMYAKCGSIVEARQ 471
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 202/420 (48%), Gaps = 17/420 (4%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ +++++L ++ + + G+ + K G+ DV V +++LY+KCGK R +FD
Sbjct: 214 STTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFD 273
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGI----QSLV 117
++ + +L+S++AMISG+ E A+ F ++ L + + +S + + L
Sbjct: 274 QIDQPDLISYNAMISGYTFNHETESAVTLFREL-LASGQRVNSSTLVGLIPVYLPFNHLQ 332
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+ I SLK G V +L ++Y ++ A ++ E+ E +L S+NA+I+G+
Sbjct: 333 LSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYT 392
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+N ++ +F+ M+ Q L P+ + L C+ L G +H L +LESN +
Sbjct: 393 QNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVY 451
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V ++ +Y+K I EA + F L+ +K++++WN I ++ L +F EM
Sbjct: 452 VSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQS- 510
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA-LVNMYAKCGLISC 356
G+ P TF SIL AC+ V G +I + Q + A +V++ + G ++
Sbjct: 511 GIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTN 570
Query: 357 SYKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
+ + M L W ++ A H N + A K Q+ P++V + LL+
Sbjct: 571 ALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQL-----DPENVGYYVLLS 625
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 201/572 (35%), Positives = 315/572 (55%), Gaps = 13/572 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++ L C + ++ G+ +HAA+LK G DV V+N ++ +Y + GKM A +F +
Sbjct: 162 TFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNL 221
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+++V+W++M++G Q G + ALEFF + L P++ S I A + L+ G+
Sbjct: 222 EGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGK 281
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE----PNLVSFNALIAGF 176
+IHAY++K G+ S VGN+LI MY K S G AF+ +L+S+ AG+
Sbjct: 282 EIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYG----GRAFDLMAHKDLISWTTAAAGY 337
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
+N+ + E+ + + +G+ D L C N L K +H T++ L S+P
Sbjct: 338 AQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGL-SDP 396
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
+ NTI+ +Y + +I A + F IE KD++SW + I+ H K L VF M +
Sbjct: 397 VLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSM-KE 455
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
G+ PD T SIL+A L++++ GK+IH +IR + + N LV+MYA+CG +
Sbjct: 456 TGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVED 515
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+YK+F +RN++ W +I+A+ H G +A++LF +MK I PD +TF+ LL AC+H
Sbjct: 516 AYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSH 575
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
+GLV EG+++ M+ Y + P EH+TCL+DLLGR L EA + K P V
Sbjct: 576 SGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWC 635
Query: 477 TLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSG 536
LL ACR+ + IGE A++L L YVL+SN++A++G W DV R +K SG
Sbjct: 636 ALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSG 695
Query: 537 LKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
L K P S IEV F + H + +I
Sbjct: 696 LTKNPGCSWIEVGNKIHAFLSRDKLHPECDKI 727
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 146/457 (31%), Positives = 246/457 (53%), Gaps = 9/457 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C + L G +H +K G V V N ++ LYAKC + ARK+FD M RN
Sbjct: 64 LLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRN 123
Query: 68 -LVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
+VSW+++IS + G AL FS+M ++ N Y FA+A+ AC + G QIH
Sbjct: 124 DVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIH 183
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A LK G +V N+L++MY++ G +A +++G ++V++N+++ GF++N
Sbjct: 184 AAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYS 243
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ E F + L PD+ S + L G +H +K +SN VGNT++
Sbjct: 244 EALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLI 303
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K + +AF L+ KDLISW T A + Y + L + +++ + G+ D
Sbjct: 304 DMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQME-GMDVDA 362
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
SIL AC GL + K+IH + IR L+ V + N ++++Y +CG+I + ++F
Sbjct: 363 TMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPV-LQNTIIDVYGECGIIDYAVRIFES 421
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA-CNHAGLVKE 422
+ ++VVSW ++I+ + ++ L AL++F MK TG++PD VT + +L+A C+ + L K
Sbjct: 422 IECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKG 481
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
E + + K + + I + L+D+ R G + +A
Sbjct: 482 KEIHGFIIRKGFILEGSISN--TLVDMYARCGSVEDA 516
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 140/472 (29%), Positives = 244/472 (51%), Gaps = 37/472 (7%)
Query: 46 LYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYI 102
+Y KCG ++ A +FD+MSER++ +W+AM+ G+ GE L ALE + +M L + Y
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
F + AC ++ L G +IH ++K+G S FV NSL+++Y K + A ++ +
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120
Query: 163 EPN-LVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
N +VS+N++I+ + N + +F ML+ G++ + ++FA L+ C S+ ++ GM
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
+H +K + +V N ++A+Y +F + EA F +E KD+++WN+ +
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
Y + L F ++ N ++PD + SI+ A L + +GK+IHA+ I+ + ++ VG
Sbjct: 241 LYSEALEFFYDLQNAD-LKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVG 299
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
N L++MYAKC +S + F+ M H++++SW T A +A ++ AL+L Q++ G+
Sbjct: 300 NTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMD 359
Query: 402 PDSVTFIGLLTAC---NHAGLVKEGEAYF-----------NSMEKTYG------------ 435
D+ +L AC N G +KE Y N++ YG
Sbjct: 360 VDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQNTIIDVYGECGIIDYAVRIF 419
Query: 436 ---ISPDIEHFTCLIDLL---GRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
D+ +T +I G A K LE K+ L D + L ++LSA
Sbjct: 420 ESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSA 471
>gi|242084292|ref|XP_002442571.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
gi|241943264|gb|EES16409.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
Length = 698
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 190/563 (33%), Positives = 317/563 (56%), Gaps = 9/563 (1%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G L + +K G+ +V ++ +L++YAKCG++ AR+VFD M RN VSW+A+I+G+ +
Sbjct: 114 GAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSDARRVFDGMPVRNTVSWNALIAGYAE 173
Query: 81 AGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
+ + A+E F +M L+P++ FA+ ++ G QQ+H K+G A V
Sbjct: 174 SRKPAQAMELFLEMQRVELVPDDATFAALLATVEGPSWYSLMQQLHGKIAKYGSALGLVV 233
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ-G 196
N+ I+ Y + G +D+ ++ +L+S+N+++ + + ++ F M+R+ G
Sbjct: 234 LNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSMLGAYAYHGMDDEAMRFFVRMMRESG 293
Query: 197 LLPDRFSFAGGLEICSVSN-DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN---LI 252
+ PD +SF + +CS D R+G +H L VK LE V N ++A+Y++F ++
Sbjct: 294 VQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKIGLEGVTHVCNAMIAMYTRFTENCMM 353
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
+A K F + KD +SWN+ + SH L F+ M ++ V D+F ++ L +
Sbjct: 354 EDAYKCFDSLVFKDAVSWNSMLTGYSHHGLSSDALRFFRFMRAEN-VSTDEFALSAALRS 412
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
C+ LA ++ G+Q+H+ +I+ + + V ++L+ MY+KCG++ + K F E + V W
Sbjct: 413 CSDLAVLRLGRQVHSLVIQSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSVPW 472
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
N+++ +A H + LF +M + D VTF+ LLTA +H GLV EG NSME
Sbjct: 473 NSMMFGYAQHGQAQTVTDLFSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEILNSMET 532
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGE 492
Y I +EH+ C +DL GRAG+L +A+E + P D +V TLL ACR+ ++ +
Sbjct: 533 RYKIPLRMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAMVWMTLLGACRIHGNMELAS 592
Query: 493 RLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTF 552
+A LF +P S YVLLS++Y+ GMW D A +K++K+ GL K P +S IEV+
Sbjct: 593 DVASHLFVAEPRQHSTYVLLSSMYSGRGMWSDRATVQKVMKNRGLSKVPGWSWIEVKNEV 652
Query: 553 EKFTVAEFSHSKIGEINYMLKTL 575
F + SH ++ EI ML+ L
Sbjct: 653 HSFNADDRSHPRMDEIFDMLRML 675
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 201/395 (50%), Gaps = 12/395 (3%)
Query: 41 NHVLNLYAKCGK---MILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH-- 95
N +L Y+ G + AR+VFDE+ + VSW+++++ H AG H A MH
Sbjct: 30 NQLLTAYSASGPGSGLAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHAR 89
Query: 96 -LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDA 154
L + + SA+ + A + G Q+ ++++K G F ++L+ +Y K G SDA
Sbjct: 90 GLTASTFALGSALRSAAAARRPELGAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSDA 149
Query: 155 LLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVS 214
V+ N VS+NALIAG+ E+++P + E+F M R L+PD +FA L
Sbjct: 150 RRVFDGMPVRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELVPDDATFAALLATVEGP 209
Query: 215 NDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFI 274
+ LH K V N + YS+ ++ + F I+ +DLISWN+ +
Sbjct: 210 SWYSLMQQLHGKIAKYGSALGLVVLNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSML 269
Query: 275 AACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA-SVQHGKQIHAHLIRMR 333
A ++ ++ + F M + GV+PD ++F S+++ C+ + G+ IH+ ++++
Sbjct: 270 GAYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKIG 329
Query: 334 LNQDVGVGNALVNMYAK----CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
L V NA++ MY + C ++ +YK F+ ++ ++ VSWN+++ +++H L AL
Sbjct: 330 LEGVTHVCNAMIAMYTRFTENC-MMEDAYKCFDSLVFKDAVSWNSMLTGYSHHGLSSDAL 388
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+ F M+A + D L +C+ +++ G
Sbjct: 389 RFFRFMRAENVSTDEFALSAALRSCSDLAVLRLGR 423
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 11/205 (5%)
Query: 234 SNPFVGNTIMALYSKFNL---IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVF 290
++P N ++ YS + A + F I D +SWN+ +AA + +
Sbjct: 24 TSPTPWNQLLTAYSASGPGSGLAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLL 83
Query: 291 KEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
K+M + G+ F S L + A + G Q+ + ++ L +V +AL+++YAK
Sbjct: 84 KDM-HARGLTASTFALGSALRSAAAARRPELGAQLQSFAVKSGLVDNVFSASALLDVYAK 142
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGL 410
CG +S + ++F+ M RN VSWN +IA +A R A++LF +M+ + PD TF L
Sbjct: 143 CGRLSDARRVFDGMPVRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELVPDDATFAAL 202
Query: 411 LTACNHAGLVKEGEAYFNSMEKTYG 435
L EG ++++ M++ +G
Sbjct: 203 LATV-------EGPSWYSLMQQLHG 220
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 194/567 (34%), Positives = 309/567 (54%), Gaps = 5/567 (0%)
Query: 13 SKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWS 72
S+ + + G+ LHA + G+ ++ V + +++LY K + LARKVFD M ER+ V W+
Sbjct: 124 SRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWN 183
Query: 73 AMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKF 129
MISG + ++ F M L + A+ ++A A +Q G I + K
Sbjct: 184 TMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKK 243
Query: 130 GYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVF 189
G S +V LIS+Y K G S +++ + +P+L+S+NA+I+G+ N + E +F
Sbjct: 244 GLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLF 303
Query: 190 KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF 249
+ +L G + + G + + N L+ ++ L++K + P V + +Y +
Sbjct: 304 RELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRL 363
Query: 250 NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
N + A + F EK L SWN I+ + ++ +S+F+EM + P+ T SI
Sbjct: 364 NEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ--LSPNPVTVTSI 421
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
L+ACA L ++ GK +H + RL +V V ALV+MYAKCG I + +LF+ M+ +NV
Sbjct: 422 LSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNV 481
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNS 429
V+WN +I + H G ALKLF +M +GI P VTF+ +L AC+H+GLV EG F+S
Sbjct: 482 VTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHS 541
Query: 430 MEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVV 489
M YG P EH+ C++D+LGRAG+L A E+ ++ PL P V G LL AC + ++
Sbjct: 542 MANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTE 601
Query: 490 IGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQ 549
+ +K+LF L P YVLLSN+Y++D + A R+++K L K P ++IE+
Sbjct: 602 MANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEID 661
Query: 550 GTFEKFTVAEFSHSKIGEINYMLKTLS 576
FT + SH + I ML+ L+
Sbjct: 662 DQQYVFTSGDRSHPQATAIFEMLEKLT 688
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 222/449 (49%), Gaps = 7/449 (1%)
Query: 17 ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMIS 76
L Q + + A ++ GI D+ + + + G + R++F+++S+ +L ++ +I
Sbjct: 26 TLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIR 85
Query: 77 GHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYA 132
G G ++ ++ + +L P+ + +A AISA + ++ G +HA+S+ G A
Sbjct: 86 GFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVA 145
Query: 133 SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM 192
S FVG++++ +Y K + A V+ E + V +N +I+GF N E VF M
Sbjct: 146 SNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDM 205
Query: 193 LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI 252
L GL D + A L + + R GM + CL K L S+ +V +++LYSK
Sbjct: 206 LDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKS 265
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
+ F I++ DLIS+N I+ + + E +++F+E+ G R + T ++
Sbjct: 266 CKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLAS-GQRVNSSTLVGLIPV 324
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
+Q + I +++ + V AL +Y + + + +LF+E +++ SW
Sbjct: 325 YLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASW 384
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
N +I+ + + L A+ LF++M + P+ VT +L+AC G + G+ + + + K
Sbjct: 385 NAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGK-WVHGLIK 442
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ + ++ T L+D+ + G ++EA +
Sbjct: 443 SERLESNVYVSTALVDMYAKCGSIVEARQ 471
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 202/420 (48%), Gaps = 17/420 (4%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ +++++L ++ + + G+ + K G+ DV V +++LY+KCGK R +FD
Sbjct: 214 STTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFD 273
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGI----QSLV 117
++ + +L+S++AMISG+ E A+ F ++ L + + +S + + L
Sbjct: 274 QIDQPDLISYNAMISGYTFNHETESAVTLFREL-LASGQRVNSSTLVGLIPVYLPFNHLQ 332
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+ I SLK G V +L ++Y ++ A ++ E+ E +L S+NA+I+G+
Sbjct: 333 LSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYT 392
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+N ++ +F+ M+ Q L P+ + L C+ L G +H L +LESN +
Sbjct: 393 QNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVY 451
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V ++ +Y+K I EA + F L+ +K++++WN I ++ L +F EM
Sbjct: 452 VSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQS- 510
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA-LVNMYAKCGLISC 356
G+ P TF SIL AC+ V G +I + Q + A +V++ + G ++
Sbjct: 511 GIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTN 570
Query: 357 SYKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
+ + M L W ++ A H N + A K Q+ P++V + LL+
Sbjct: 571 ALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQL-----DPENVGYYVLLS 625
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 201/571 (35%), Positives = 326/571 (57%), Gaps = 21/571 (3%)
Query: 19 QQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
++G +HA +++ + +++ N ++NLYAKC + AR +F M ++ VSW+++ISG
Sbjct: 371 RKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISG 430
Query: 78 --HHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYA 132
H++ E +A F M ++P+++ S +S+CA + ++ GQQIH +K G
Sbjct: 431 LDHNERFEEAVAC--FHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLD 488
Query: 133 SISFVGNSLISMYMKVGYSSDALLVYGEAF----EPNLVSFNALIAGFVENQQPE-KGFE 187
V N+L+++Y + +D + Y + F E + VS+N+ I ++ + +
Sbjct: 489 LDVSVSNALLTLYAE----TDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIK 544
Query: 188 VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYS 247
F M++ G P+R +F L S + L G +H L +K + + + NT++A Y
Sbjct: 545 YFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYG 604
Query: 248 KFNLIGEAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
K + + E F R+ E +D +SWN I+ H K + + M G R DDFT
Sbjct: 605 KCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQK-GQRLDDFTL 663
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
A++L+ACA +A+++ G ++HA IR L +V VG+ALV+MYAKCG I + + F M
Sbjct: 664 ATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPV 723
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
RN+ SWN++I+ +A H GG ALKLF QMK G PD VTF+G+L+AC+H GLV EG +
Sbjct: 724 RNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEH 783
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC--RL 484
F SM + Y ++P IEHF+C++DLLGRAG + + EE+ K P+ + ++ T+L AC
Sbjct: 784 FKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACCRAN 843
Query: 485 RRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYS 544
R+ +G R AK L L+P YVLLSN++A+ G W DV AR ++++ +KKE S
Sbjct: 844 SRNTELGRRAAKMLIELEPLNAVNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCS 903
Query: 545 MIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ ++ F + +H + +I LK +
Sbjct: 904 WVTMKDGVHVFVAGDQTHPEKEKIYDKLKEI 934
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 137/499 (27%), Positives = 239/499 (47%), Gaps = 46/499 (9%)
Query: 8 LLHHCSKTK-------------------ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYA 48
LLHHC+ + ++ LH + K G+ DV N ++N++
Sbjct: 26 LLHHCNSSHHHLHFPPLNLDYNRYRDSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFV 85
Query: 49 KCGKMILARKVFDEMSERNLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFAS 105
+ G ++ A+K+FDEM ++NLVSWS ++SG+ Q G E + LLPN Y S
Sbjct: 86 RAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGS 145
Query: 106 AISACA--GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS-SDALLVYGEAF 162
A+ AC G L G +IH K YAS + N L+SMY S DA V+ E
Sbjct: 146 ALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIK 205
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG----LLPDRFSFAGGLEI-CSVSN-- 215
S+N++I+ + F++F M R+ P+ ++F + + CS+ +
Sbjct: 206 MKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCG 265
Query: 216 -DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFI 274
L + M+ K + +VG+ +++ ++++ LI A+ F +++++ ++ N +
Sbjct: 266 LTLLEQMLAR--IEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLM 323
Query: 275 AACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGK----QIHAHLI 330
+ E+ +FKEM + V + ++A +L+A ++++ GK ++HA+LI
Sbjct: 324 VGLARQHQGEEAAKIFKEMKD--LVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLI 381
Query: 331 RMRL-NQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
R L + + +GNALVN+YAKC I + +F M ++ VSWN+II+ ++ A+
Sbjct: 382 RNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAV 441
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
F M+ G+ P + I L++C G + G+ K G+ D+ L+ L
Sbjct: 442 ACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKC-GLDLDVSVSNALLTL 500
Query: 450 LGRAGKLLEAEEYTKKFPL 468
+ EEY K F L
Sbjct: 501 YAETDCM---EEYQKVFFL 516
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 202/408 (49%), Gaps = 19/408 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+ S L C+ + G +H +K G+ DV VSN +L LYA+ M +KVF M
Sbjct: 458 SVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLM 517
Query: 64 SERNLVSWSAMISGHHQAGEHLL-ALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
E + VSW++ I + +L A+++F +M PN F + +SA + + L G
Sbjct: 518 PEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELG 577
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE-PNLVSFNALIAGFVE 178
+QIHA LK A + + N+L++ Y K D +++ E + VS+NA+I+G++
Sbjct: 578 RQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIH 637
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N K + LM+++G D F+ A L C+ L +GM +H ++ LE+ V
Sbjct: 638 NGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVV 697
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
G+ ++ +Y+K I A + F L+ +++ SWN+ I+ + K L +F +M HG
Sbjct: 698 GSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQ-HG 756
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRM----RLNQDVGVGNALVNMYAKCGLI 354
PD TF +L+AC+ + V G + H M L + + +V++ + G +
Sbjct: 757 QLPDHVTFVGVLSACSHVGLVDEGFE---HFKSMGEVYELAPRIEHFSCMVDLLGRAGDV 813
Query: 355 SCSYKLFNEM-LHRNVVSWNTIIAA--HANHR---LGGSALKLFEQMK 396
+ M ++ N + W TI+ A AN R LG A K+ +++
Sbjct: 814 KKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELE 861
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 193/565 (34%), Positives = 317/565 (56%), Gaps = 9/565 (1%)
Query: 19 QQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
++G +HA + + G + + + N ++N+Y KC + A VF M ++ VSW++MISG
Sbjct: 472 RKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISG 531
Query: 78 HHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
A+ F M ++P+ + S +S+C+ + L G+QIH K+G
Sbjct: 532 LDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLD 591
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE-KGFEVFKLML 193
V N+L+++Y + ++ V+ + E + VS+N+ I + + + + F M+
Sbjct: 592 VSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMM 651
Query: 194 RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
+ G P+R +F L S + L G +H L +K + + + N ++A Y K +
Sbjct: 652 QAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQME 711
Query: 254 EAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
+ E F R+ E +D +SWN+ I+ H K + + M G + D FTFA++L+A
Sbjct: 712 DCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQ-RGQKLDGFTFATVLSA 770
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
CA +A+++ G ++HA +R L DV VG+ALV+MYAKCG I + + F M RN+ SW
Sbjct: 771 CASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSW 830
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
N++I+ +A H G ALK+F +MK G PD VTF+G+L+AC+H GLV EG +F SM +
Sbjct: 831 NSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGE 890
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA-CRLR-RDVVI 490
YG+SP IEHF+C++DLLGRAG + + E++ K P+ + ++ T+L A CR R+ +
Sbjct: 891 VYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTEL 950
Query: 491 GERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQG 550
G+R AK L L+P YVLLSN++A+ G W DV AR ++ + +KK+ S + ++
Sbjct: 951 GQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKD 1010
Query: 551 TFEKFTVAEFSHSKIGEINYMLKTL 575
F + +H + +I LK L
Sbjct: 1011 GVHLFVAGDQTHPEKEKIYEKLKEL 1035
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 232/473 (49%), Gaps = 26/473 (5%)
Query: 15 TKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAM 74
+ +L LH + K G DV N ++N+Y + G ++ ARK+FDEM ++NLVSWS +
Sbjct: 153 SSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCL 212
Query: 75 ISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISAC--AGIQSLVKGQQIHAYSLKF 129
ISG+ Q A F + LLPN + SA+ AC G + G QIHA+ K
Sbjct: 213 ISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKL 272
Query: 130 GYASISFVGNSLISMYMKV-GYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
S + N L+SMY G DA V+ E N V++N++I+ + F++
Sbjct: 273 PCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKL 332
Query: 189 FKLMLRQG----LLPDRFSFAGGLE-ICSVSNDLRKGMIL--HCLTV--KCKLESNPFVG 239
F +M +G L P+ ++ + CS+++ G++L LT K + +VG
Sbjct: 333 FSVMQMEGVELNLRPNEYTLCSLVTAACSLAD---CGLVLLEQMLTRIEKSGFLRDLYVG 389
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+ ++ ++++ L+ A+ F+ + +++ ++ N + + E+ VFKEM + V
Sbjct: 390 SALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKD--LV 447
Query: 300 RPDDFTFASILAACAGLASVQHGK----QIHAHLIRMRL-NQDVGVGNALVNMYAKCGLI 354
+ + +L+ ++++ GK ++HA+L R L + + +GNALVNMY KC I
Sbjct: 448 EINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAI 507
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ +F M ++ VSWN++I+ ++ A+ F MK G+ P + + I L++C
Sbjct: 508 DNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSC 567
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+ G + G K +G+ D+ L+ L + E ++ + P
Sbjct: 568 SSLGWLTLGRQIHGEGFK-WGLDLDVSVSNALLTLYAETDSINECQKVFFQMP 619
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 203/408 (49%), Gaps = 19/408 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+ S L CS L G +H K G+ DV VSN +L LYA+ + +KVF +M
Sbjct: 559 SVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQM 618
Query: 64 SERNLVSWSAMISGHHQAGEHLL-ALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
E + VSW++ I + +L AL++F +M PN F + ++A + L G
Sbjct: 619 PEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLG 678
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE-PNLVSFNALIAGFVE 178
QIHA LK+ A + + N+L++ Y K D +++ E + VS+N++I+G++
Sbjct: 679 HQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLH 738
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ K ++ M+++G D F+FA L C+ L +GM +H V+ LES+ V
Sbjct: 739 SGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVV 798
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
G+ ++ +Y+K I A + F L+ +++ SWN+ I+ + +K L +F M HG
Sbjct: 799 GSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQ-HG 857
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRM----RLNQDVGVGNALVNMYAKCGLI 354
PD TF +L+AC+ + V G + H M L+ + + +V++ + G +
Sbjct: 858 QSPDHVTFVGVLSACSHVGLVDEG---YKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDV 914
Query: 355 SCSYKLFNEM-LHRNVVSWNTIIAA--HANHR---LGGSALKLFEQMK 396
M + N++ W T++ A AN R LG A K+ +++
Sbjct: 915 KKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELE 962
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 189/583 (32%), Positives = 326/583 (55%), Gaps = 16/583 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++++L C++ + + G +H +K+ + +V+V+N ++++Y+KCG + A+ +F
Sbjct: 291 TLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLN 350
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM-----HLLPNEYIFASAISACAGIQSLVK 118
+ +N+VSW+ M+ G AG+ + QM L +E +A+ C L
Sbjct: 351 NNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPN 410
Query: 119 GQQIHAYSLKFGYA-SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+++H YSLK + + V N+ ++ Y K G S A V+ + S+NALI G+
Sbjct: 411 LKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYS 470
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
++ P + + M GLLPD F+ L CS L+ G +H L ++ +LE + F
Sbjct: 471 QSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSF 530
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V ++++LY + A F +E+K L+SWNT + E+ LS+F++M +
Sbjct: 531 VYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVL-Y 589
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
GV+P + + S+ AC+ L S++ G++ H + ++ L + + ++++MYAK G + S
Sbjct: 590 GVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMES 649
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+K+FN + R+V SWN ++ + H A+KLFE+M+ TG PD +TF+G+LTACNH+
Sbjct: 650 FKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHS 709
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA-----EEYTKKFPLGQDP 472
GLV EG Y + M+ +G++P ++H+ C+ID+L RAGKL EA EE +++ +G
Sbjct: 710 GLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVG--- 766
Query: 473 IVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKML 532
+ LLS+CR+ +++ +GE++A +LF +P YVLLSNLYA G W +V R+ +
Sbjct: 767 -IWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRM 825
Query: 533 KDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
K+ L+K+ S IE+ G F E S EI + L
Sbjct: 826 KEMSLRKDAGCSWIELNGKVFSFVAGESSLDGFEEIKSLWSVL 868
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 217/422 (51%), Gaps = 11/422 (2%)
Query: 14 KTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWS 72
+ K +Q G +H V + + D ++ V+ +Y+ CG +R VFD + ++NL W+
Sbjct: 93 RRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWN 152
Query: 73 AMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
A+IS + + + LE F +M LLP+ + F + ACAG+ + G +H +K
Sbjct: 153 AVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVK 212
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
FV N+L+S Y G SDAL V+ E NLVS+N++I F +N E+ F +
Sbjct: 213 TRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLL 272
Query: 189 FKLMLRQ----GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
M+ + PD + A L +C+ ++ G +H L +K L+ V N +M
Sbjct: 273 LGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMD 332
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG-VRPDD 303
+YSK I +A+ F+L K+++SWNT + S D K + ++M G +R D+
Sbjct: 333 MYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADE 392
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCSYKLFN 362
T + + C + + + K++H + ++ ++ + V NA V YAKCG +S ++++F
Sbjct: 393 VTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFC 452
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+ + V SWN +I ++ +L + QMK++G+ PD T LL+AC+ +K
Sbjct: 453 SIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKL 512
Query: 423 GE 424
G+
Sbjct: 513 GK 514
>gi|30689384|ref|NP_194969.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75147159|sp|Q84MA3.1|PP345_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g32430, mitochondrial; Flags: Precursor
gi|30102674|gb|AAP21255.1| At4g32430 [Arabidopsis thaliana]
gi|110742925|dbj|BAE99358.1| hypothetical protein [Arabidopsis thaliana]
gi|332660658|gb|AEE86058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 195/587 (33%), Positives = 322/587 (54%), Gaps = 18/587 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + S+ L C ++ G+ L + V+K G++ D++V N + +Y++ G AR+VFD
Sbjct: 174 AFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFD 233
Query: 62 EMSERNLVSWSAMISGHHQAGEH-LLALEFFSQMH---LLPNEYIFASAISACAGIQSLV 117
EMS ++++SW++++SG Q G A+ F M + + F S I+ C L
Sbjct: 234 EMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLK 293
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+QIH +K GY S+ VGN L+S Y K G V+ + E N+VS+ +I+
Sbjct: 294 LARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS--- 350
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ +F M G+ P+ +F G + + +++G+ +H L +K S P
Sbjct: 351 --SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPS 408
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
VGN+ + LY+KF + +A+KAF I +++ISWN I+ + + L +F +S
Sbjct: 409 VGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF--LSAAA 466
Query: 298 GVRPDDFTFASILAACAGLA--SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
P+++TF S+L A A SV+ G++ HAHL+++ LN V +AL++MYAK G I
Sbjct: 467 ETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNID 526
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
S K+FNEM +N W +II+A+++H + + LF +M + PD VTF+ +LTACN
Sbjct: 527 ESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACN 586
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
G+V +G FN M + Y + P EH++C++D+LGRAG+L EAEE + P G +L
Sbjct: 587 RKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESML 646
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
++L +CRL +V +G ++A+ ++P + YV + N+YA W A RK ++
Sbjct: 647 QSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKK 706
Query: 536 GLKKEPSYSMIEVQG-----TFEKFTVAEFSHSKIGEINYMLKTLSL 577
+ KE +S I+V T + F+ + SH K EI M++ + L
Sbjct: 707 NVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGL 753
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 128/452 (28%), Positives = 234/452 (51%), Gaps = 21/452 (4%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L++G +H G V VSN V+ +Y K G+ A +F+ + + ++VSW+ ++SG
Sbjct: 92 LKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSG 151
Query: 78 HHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
++ +AL F +M ++ + + +++A+S C G + + G Q+ + +K G S
Sbjct: 152 FD---DNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESD 208
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE---VFKL 191
VGNS I+MY + G A V+ E +++S+N+L++G +Q+ GFE +F+
Sbjct: 209 LVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGL--SQEGTFGFEAVVIFRD 266
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
M+R+G+ D SF + C DL+ +H L +K ES VGN +M+ YSK +
Sbjct: 267 MMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGV 326
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ + F + E++++SW T I+ ++ + +S+F M D GV P++ TF ++
Sbjct: 327 LEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFD-GVYPNEVTFVGLIN 380
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
A ++ G +IH I+ + VGN+ + +YAK + + K F ++ R ++S
Sbjct: 381 AVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIIS 440
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG--LVKEGEAYFNS 429
WN +I+ A + ALK+F A + P+ TF +L A A VK+G+
Sbjct: 441 WNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAH 499
Query: 430 MEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ K G++ + L+D+ + G + E+E+
Sbjct: 500 LLK-LGLNSCPVVSSALLDMYAKRGNIDESEK 530
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 194/382 (50%), Gaps = 29/382 (7%)
Query: 55 LARKVFDEMSERNLVSWSAMISGHHQAGEHLL------ALEFFSQMHLLP------NEYI 102
+A K+FD S+RN A S +H E L AL F + L +E
Sbjct: 26 IAHKLFDGSSQRN-----ATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVT 80
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
A+ AC G L +G QIH +S G+ S V N+++ MY K G +AL ++
Sbjct: 81 LCLALKACRG--DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLV 138
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
+P++VS+N +++GF +NQ M G++ D F+++ L C S G+
Sbjct: 139 DPDVVSWNTILSGFDDNQ---IALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQ 195
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
L VK LES+ VGN+ + +YS+ A + F + KD+ISWN+ ++ S
Sbjct: 196 LQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGT 255
Query: 283 YE-KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
+ + + +F++M + GV D +F S++ C ++ +QIH I+ + VG
Sbjct: 256 FGFEAVVIFRDMMRE-GVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVG 314
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
N L++ Y+KCG++ +F++M RNVVSW T+I+++ + A+ +F M+ G+
Sbjct: 315 NILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKD-----DAVSIFLNMRFDGVY 369
Query: 402 PDSVTFIGLLTACNHAGLVKEG 423
P+ VTF+GL+ A +KEG
Sbjct: 370 PNEVTFVGLINAVKCNEQIKEG 391
>gi|297848206|ref|XP_002891984.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337826|gb|EFH68243.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 611
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 183/529 (34%), Positives = 308/529 (58%), Gaps = 9/529 (1%)
Query: 37 VIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH- 95
++ +N +++ + K G + AR +FDEM ER++V+W+AMI+G+ + + A E F +M
Sbjct: 46 ILATNLIVSYFEK-GLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHEMFK 104
Query: 96 --LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSD 153
PNE+ +S + +C ++ L G +H +K G +V N+L++MY + +
Sbjct: 105 QGRSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTME 164
Query: 154 A-LLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
A L++ + N V++ LI GF G +++K ML + + + +
Sbjct: 165 AAFLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRASA 224
Query: 213 VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNT 272
+ + G +H VK +SN V N+I+ Y + + EA++ F +E+KDLI+WNT
Sbjct: 225 SIDSVTTGKQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNT 284
Query: 273 FIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
I+ +D + L +F+ + G P+ +TF S++AACA +A++ G+Q+H + R
Sbjct: 285 LISELER-SDSSEALLMFQRFES-QGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRR 342
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEML-HRNVVSWNTIIAAHANHRLGGSALKL 391
N++V + NAL++MYAKCG I S ++F E+ RN+VSW +++ + +H G A++L
Sbjct: 343 GFNKNVELANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVEL 402
Query: 392 FEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLG 451
F++M ++GI+PD + F+ +L+AC HAGLV++G YFN ME YGI+PD + + C++DLLG
Sbjct: 403 FDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLG 462
Query: 452 RAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERL-AKQLFHLQPTTTSPYV 510
RAGK+ EA E ++ P D G +L AC+ + + RL AK++ L+P YV
Sbjct: 463 RAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHTGLISRLAAKKVMELKPRMVGTYV 522
Query: 511 LLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAE 559
+LS +YA++G W + A RKM++ G KKE S IEV+ F V++
Sbjct: 523 MLSYIYAAEGKWVEFARVRKMMRMMGNKKEAGMSWIEVENQVFSFAVSD 571
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 210/416 (50%), Gaps = 13/416 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCG-KMILARKVFDE 62
++SS+L C K L G +H V+K+G++ + V N ++N+YA C M A +F +
Sbjct: 113 TLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEAAFLIFRD 172
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPN----EYIFASAISACAGIQSLVK 118
+ +N V+W+ +I+G G+ + L+ + QM LL N Y A+ A A I S+
Sbjct: 173 IKVKNDVTWTTLITGFTHLGDGIGGLKMYKQM-LLENADVTPYCITIAVRASASIDSVTT 231
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+QIHA +K G+ S V NS++ Y + GY S+A + E + +L+++N LI+ +E
Sbjct: 232 GKQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNTLISE-LE 290
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ +F+ QG +P+ ++F + C+ L G LH + N +
Sbjct: 291 RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRGFNKNVEL 350
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEE-KDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
N ++ +Y+K I ++E+ F IEE ++L+SW + + + + +F +M +
Sbjct: 351 ANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSS- 409
Query: 298 GVRPDDFTFASILAACAGLASVQHG-KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
G+RPD F ++L+AC V+ G K + +N D + N +V++ + G I
Sbjct: 410 GIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGE 469
Query: 357 SYKLFNEMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV-TFIGL 410
+Y+L M + + +W I+ A H+ G +L + K +KP V T++ L
Sbjct: 470 AYELVERMPFKPDESTWGAILGACKAHKHTGLISRLAAK-KVMELKPRMVGTYVML 524
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 128/279 (45%), Gaps = 17/279 (6%)
Query: 213 VSNDLRKGMILHCLTVKCKLESNPF--------VGNTIMALYSKFNLIGEAEKAFRLIEE 264
+ N +R + C+ ES P+ N I++ + K L+ EA F + E
Sbjct: 15 IPNFVRSSLRNACVESSQNTESPPYKPKKHHILATNLIVSYFEK-GLVEEARSLFDEMPE 73
Query: 265 KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ 324
+D+++W I + F EM G P++FT +S+L +C + + +G
Sbjct: 74 RDVVAWTAMITGYASSNYNSCAWECFHEMFK-QGRSPNEFTLSSVLKSCRNMKVLAYGAL 132
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGL-ISCSYKLFNEMLHRNVVSWNTIIAAHANHR 383
+H ++++ + + V NAL+NMYA C + + ++ +F ++ +N V+W T+I +
Sbjct: 133 VHGVVVKLGMEGSLYVDNALMNMYATCSVTMEAAFLIFRDIKVKNDVTWTTLITGFTHLG 192
Query: 384 LGGSALKLFEQM--KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIE 441
G LK+++QM + + P +T + A V G+ S+ K G ++
Sbjct: 193 DGIGGLKMYKQMLLENADVTPYCITIA--VRASASIDSVTTGKQIHASVVKR-GFQSNLP 249
Query: 442 HFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
++D R G L EA+ Y + +D I TL+S
Sbjct: 250 VMNSILDFYCRCGYLSEAKRYFHEME-DKDLITWNTLIS 287
>gi|4049345|emb|CAA22570.1| putative protein [Arabidopsis thaliana]
gi|7270147|emb|CAB79960.1| putative protein [Arabidopsis thaliana]
Length = 688
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 196/587 (33%), Positives = 324/587 (55%), Gaps = 18/587 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + S+ L C ++ G+ L + V+K G++ D++V N + +Y++ G AR+VFD
Sbjct: 99 AFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFD 158
Query: 62 EMSERNLVSWSAMISGHHQAGEH-LLALEFFSQMH---LLPNEYIFASAISACAGIQSLV 117
EMS ++++SW++++SG Q G A+ F M + + F S I+ C L
Sbjct: 159 EMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLK 218
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+QIH +K GY S+ VGN L+S Y K G V+ + E N+VS+ +I+
Sbjct: 219 LARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS--- 275
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ +F M G+ P+ +F G + + +++G+ +H L +K S P
Sbjct: 276 --SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPS 333
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
VGN+ + LY+KF + +A+KAF I +++ISWN I+ + + L +F +S
Sbjct: 334 VGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF--LSAAA 391
Query: 298 GVRPDDFTFASILAACAGLA--SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
P+++TF S+L A A SV+ G++ HAHL+++ LN V +AL++MYAK G I
Sbjct: 392 ETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNID 451
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
S K+FNEM +N W +II+A+++H + + LF +M + PD VTF+ +LTACN
Sbjct: 452 ESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACN 511
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
G+V +G FN M + Y + P EH++C++D+LGRAG+L EAEE + P G +L
Sbjct: 512 RKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESML 571
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
++L +CRL +V +G ++A+ ++P + YV + N+YA W A RK ++
Sbjct: 572 QSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKK 631
Query: 536 GLKKEPSYSMIEV---QG--TFEKFTVAEFSHSKIGEINYMLKTLSL 577
+ KE +S I+V +G T + F+ + SH K EI M++ + L
Sbjct: 632 NVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGL 678
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 128/452 (28%), Positives = 234/452 (51%), Gaps = 21/452 (4%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L++G +H G V VSN V+ +Y K G+ A +F+ + + ++VSW+ ++SG
Sbjct: 17 LKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSG 76
Query: 78 HHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
++ +AL F +M ++ + + +++A+S C G + + G Q+ + +K G S
Sbjct: 77 FD---DNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESD 133
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE---VFKL 191
VGNS I+MY + G A V+ E +++S+N+L++G +Q+ GFE +F+
Sbjct: 134 LVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGL--SQEGTFGFEAVVIFRD 191
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
M+R+G+ D SF + C DL+ +H L +K ES VGN +M+ YSK +
Sbjct: 192 MMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGV 251
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ + F + E++++SW T I+ ++ + +S+F M D GV P++ TF ++
Sbjct: 252 LEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFD-GVYPNEVTFVGLIN 305
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
A ++ G +IH I+ + VGN+ + +YAK + + K F ++ R ++S
Sbjct: 306 AVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIIS 365
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG--LVKEGEAYFNS 429
WN +I+ A + ALK+F A + P+ TF +L A A VK+G+
Sbjct: 366 WNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAH 424
Query: 430 MEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ K G++ + L+D+ + G + E+E+
Sbjct: 425 LLK-LGLNSCPVVSSALLDMYAKRGNIDESEK 455
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 173/326 (53%), Gaps = 12/326 (3%)
Query: 99 NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY 158
+E A+ AC G L +G QIH +S G+ S V N+++ MY K G +AL ++
Sbjct: 2 DEVTLCLALKACRG--DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIF 59
Query: 159 GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLR 218
+P++VS+N +++GF +NQ M G++ D F+++ L C S
Sbjct: 60 ENLVDPDVVSWNTILSGFDDNQ---IALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFL 116
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
G+ L VK LES+ VGN+ + +YS+ A + F + KD+ISWN+ ++ S
Sbjct: 117 LGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLS 176
Query: 279 HCADYE-KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD 337
+ + + +F++M + GV D +F S++ C ++ +QIH I+
Sbjct: 177 QEGTFGFEAVVIFRDMMRE-GVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESL 235
Query: 338 VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA 397
+ VGN L++ Y+KCG++ +F++M RNVVSW T+I+++ + A+ +F M+
Sbjct: 236 LEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKD-----DAVSIFLNMRF 290
Query: 398 TGIKPDSVTFIGLLTACNHAGLVKEG 423
G+ P+ VTF+GL+ A +KEG
Sbjct: 291 DGVYPNEVTFVGLINAVKCNEQIKEG 316
>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
Length = 629
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 183/545 (33%), Positives = 297/545 (54%), Gaps = 5/545 (0%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM- 94
+V V +LN+Y K G + AR+VFD M +RN SWS M++G+ A + F M
Sbjct: 46 NVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLML 105
Query: 95 HLLPNE---YIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
P+E ++ + +SA + L+ G+Q+H +K G V NSL++MY K G
Sbjct: 106 EECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCM 165
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
A V+ + E N ++++A+I G+ +N + + +F M G P F+F G L
Sbjct: 166 GAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNAS 225
Query: 212 SVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
S L G H L VK E +V + ++ +Y+K I +A++ F + E D++ W
Sbjct: 226 SDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWT 285
Query: 272 TFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
++ ++E+ L+++ M + G+ P T AS L ACAG+A+++ GKQ+H +++
Sbjct: 286 AMVSGHVQNGEHEEALTLYARMDKE-GIIPSKSTIASGLRACAGIAALEPGKQLHTQIVK 344
Query: 332 MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
L VG+AL MY+KCG + +F + R+V++WN+II+ + + G AL L
Sbjct: 345 YGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDL 404
Query: 392 FEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLG 451
FE+MK G PD++TFI +L AC+H GLV G YF+ M K YG++P ++H+ C++D+L
Sbjct: 405 FEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILS 464
Query: 452 RAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVL 511
RAG L EA+++ + + + +L ACR RD +G ++L L +S Y+L
Sbjct: 465 RAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYIL 524
Query: 512 LSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYM 571
LSN+YAS W DV R +++ G+ K+P S +E+ F V E H + IN
Sbjct: 525 LSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQ 584
Query: 572 LKTLS 576
L+ L+
Sbjct: 585 LRRLA 589
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 193/396 (48%), Gaps = 9/396 (2%)
Query: 90 FFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYA-SISFVGNSLISMYMKV 148
S +LP+ + FA+A +A A S G HA + K A S +V SL++MY K+
Sbjct: 1 MLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKL 60
Query: 149 GYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP---DRFSFA 205
G SDA V+ + N S++ ++AG+ + E+ F++F+LML + P F
Sbjct: 61 GIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEE--CPSEKSEFVAT 118
Query: 206 GGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK 265
L SV L G +H L VK L V N+++ +Y+K +G A F E+
Sbjct: 119 AVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRER 178
Query: 266 DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
+ I+W+ I + + + +S+F +M + G P +FTF +L A + L ++ GKQ
Sbjct: 179 NSITWSAMITGYAQNGEADSAVSMFSQM-HAAGFTPTEFTFVGVLNASSDLGALAVGKQA 237
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
H ++++ + V +ALV+MYAKCG I+ + + F+++ ++V W +++ H +
Sbjct: 238 HGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEH 297
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
AL L+ +M GI P T L AC ++ G+ + K YG+ +
Sbjct: 298 EEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVK-YGLGLGAPVGSA 356
Query: 446 LIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
L + + G L + ++ P +D I +++S
Sbjct: 357 LSTMYSKCGNLEDGMSVFRRIP-DRDVIAWNSIISG 391
>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 754
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 180/569 (31%), Positives = 305/569 (53%), Gaps = 15/569 (2%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C ++ +H V+K G + V + ++N+YAKCG M AR+VF+ M RN
Sbjct: 70 LLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMPRRN 129
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHA 124
+V+W+ ++ G Q + A+ F +M P+ Y ++ + AC+ +QSL G Q HA
Sbjct: 130 VVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHA 189
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
Y +K+ + VG++L S+Y K G DAL + E N++S+ + ++ +N P K
Sbjct: 190 YIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGAPVK 249
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
G +F M+ + + P+ F+ L C L G + L +K ESN V N+++
Sbjct: 250 GLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLY 309
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA-----------CSHCADYEKGLSVFKEM 293
LY K I EA + F +++ +++WN IA S C + L +F ++
Sbjct: 310 LYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKL 369
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
N G++PD FT +S+L+ C+ + +++ G+QIHA I+ DV V +L++MY KCG
Sbjct: 370 -NQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGS 428
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
I + K F EM R +++W ++I + H + AL +FE M G++P++VTF+G+L+A
Sbjct: 429 IERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSA 488
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C+HAG+V + YF M+K Y I P ++H+ C++D+ R G+L +A + KK
Sbjct: 489 CSHAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEF 548
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
+ ++ CR ++ +G ++QL L+P YVLL N+Y S + DV+ RKM++
Sbjct: 549 IWSNFIAGCRSHGNLELGFYASEQLLSLKPKDPETYVLLLNMYLSADRFDDVSRVRKMME 608
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
+ K +S I ++ F + +H
Sbjct: 609 VEKVGKLKDWSWISIKDKVYSFKTNDKTH 637
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 190/370 (51%), Gaps = 13/370 (3%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+ + C +S Q +H + +K G FV + L+++Y K G DA V+
Sbjct: 67 YVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMP 126
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
N+V++ L+ GFV+N QP+ VF+ ML G P ++ + L CS L+ G
Sbjct: 127 RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQ 186
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
H +K L+ + VG+ + +LYSK + +A KAF I EK++ISW + ++AC
Sbjct: 187 FHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGA 246
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
KGL +F EM ++ ++P++FT S L+ C + S++ G Q+ + I+ ++ V N
Sbjct: 247 PVKGLRLFVEMISE-DIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRN 305
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH-----------RLGGSALKL 391
+L+ +Y K G I +++ FN M ++V+WN +IA HA + G ALK+
Sbjct: 306 SLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKI 365
Query: 392 FEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLG 451
F ++ +G+KPD T +L+ C+ +++GE KT G D+ T LI +
Sbjct: 366 FSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKT-GFLSDVIVSTSLISMYN 424
Query: 452 RAGKLLEAEE 461
+ G + A +
Sbjct: 425 KCGSIERASK 434
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 218/426 (51%), Gaps = 22/426 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++S++LH CS ++L+ G HA ++K + D V + + +LY+KCG++ A K F +
Sbjct: 167 TLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRI 226
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
E+N++SW++ +S G + L F +M + PNE+ SA+S C I SL G
Sbjct: 227 REKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGT 286
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN- 179
Q+ + +KFGY S V NSL+ +Y+K G+ +A + + ++V++NA+IAG +
Sbjct: 287 QVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMM 346
Query: 180 ----------QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK 229
Q+ + ++F + + G+ PD F+ + L +CS + +G +H T+K
Sbjct: 347 ELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIK 406
Query: 230 CKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSV 289
S+ V +++++Y+K I A KAF + + +I+W + I S ++ L +
Sbjct: 407 TGFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHI 466
Query: 290 FKEMSNDHGVRPDDFTFASILAAC--AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNM 347
F++MS GVRP+ TF +L+AC AG+ S Q + ++ + +V+M
Sbjct: 467 FEDMSLA-GVRPNTVTFVGVLSACSHAGMVS-QALNYFEIMQKKYKIKPVMDHYECMVDM 524
Query: 348 YAKCGLISCSYKLFNEMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP-DSV 405
+ + G + + +M + + W+ IA +H G L + + +KP D
Sbjct: 525 FVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRSH--GNLELGFYASEQLLSLKPKDPE 582
Query: 406 TFIGLL 411
T++ LL
Sbjct: 583 TYVLLL 588
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 110/222 (49%), Gaps = 27/222 (12%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+L CS+ A++QG +HA +K G DVIVS ++++Y KCG + A K F EM
Sbjct: 380 TLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEM 439
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISAC--AGIQSLVK 118
S R +++W++MI+G Q G AL F M L PN F +SAC AG+ S
Sbjct: 440 STRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVS--- 496
Query: 119 GQQIHAYSL---KFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIA 174
Q ++ + + K+ + ++ M++++G AL + +EP+ ++ IA
Sbjct: 497 -QALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIA 555
Query: 175 GFVENQQPEKGF--------------EVFKLMLRQGLLPDRF 202
G + E GF E + L+L L DRF
Sbjct: 556 GCRSHGNLELGFYASEQLLSLKPKDPETYVLLLNMYLSADRF 597
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 198/600 (33%), Positives = 324/600 (54%), Gaps = 32/600 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+++ C + + G +H ++K G++ + N ++ Y KCG + A ++F+ +
Sbjct: 227 TYASVVNACGSSGEEKYGAMVHGRIIKAGLEATNLW-NSLVTFYGKCGNLQHASQLFERI 285
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM-----HLLPNEYIFASAISACAGIQSLVK 118
S +++VSW+AMI+ + Q GE AL F +M + PN F S +SA +G+ +L
Sbjct: 286 SRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRC 345
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G++IHA+ + + + NSLI+ Y K A ++ +++S+N+++AG+ +
Sbjct: 346 GREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQ 405
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSND----LRKGMILHCLTVKCKLES 234
N+Q + F++FK M+ G+ PD S S + R+G +H ++
Sbjct: 406 NEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILR---RI 462
Query: 235 NP-----FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSV 289
P V N I+ +Y+KFN I +AEK F+ ++ +D SWN + S A +E L +
Sbjct: 463 TPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMI 522
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD-------VGVGN 342
F ++ G D + + +L +C L S+Q GKQ HA + ++ QD + + N
Sbjct: 523 FLDILK-QGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINN 581
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
AL++MY+KCG I + ++F +M ++V SW +I A+H L AL+LFE+MK GIKP
Sbjct: 582 ALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKP 641
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
+ VTF+ LL AC H GLV+EG YF+SM YG+SP IEH+ C+IDL GR+G+ A+
Sbjct: 642 NQVTFLALLMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSL 701
Query: 463 TK----KFPLGQDPI--VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLY 516
+ F D I + LL AC + + +G A ++ L+P + Y+LL+NLY
Sbjct: 702 VEFGITLFKPYHDDILNLWKVLLGACHASKQLDLGVEAATKILELEPEDEATYILLANLY 761
Query: 517 ASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
AS G+W D RK ++D GL+KE S I+ F + H + EI L L+
Sbjct: 762 ASSGLWEDAIKVRKAMRDKGLRKEVGCSWIDTGNRRHVFVAGDVYHPQRKEIYEKLAQLN 821
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 209/391 (53%), Gaps = 11/391 (2%)
Query: 52 KMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAIS 108
++ A+++FD R+++SWSA+I+ + + G A F +M L PN + AS +
Sbjct: 70 RLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLK 129
Query: 109 ACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA--FEPNL 166
+ +Q+H +S++ G+ S + + I+MY + G DA V+ E ++
Sbjct: 130 VSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDI 189
Query: 167 VSFNALIAGFVENQQPEKGFEVFKLMLRQGLL-PDRFSFAGGLEICSVSNDLRKGMILHC 225
+ +N++IA ++ + + +F M+ G++ P ++A + C S + + G ++H
Sbjct: 190 LLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHG 249
Query: 226 LTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEK 285
+K LE+ + N+++ Y K + A + F I KD++SWN IAA + E
Sbjct: 250 RIIKAGLEATN-LWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGEN 308
Query: 286 GLSVFKEMSN-DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNAL 344
L +F+ M + V+P+ TF S+L+A +GL++++ G++IHAH+ R+ L D + N+L
Sbjct: 309 ALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSL 368
Query: 345 VNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDS 404
+ Y+KC + + ++F +L R+++SWN+++A + + G +F++M +GI+PDS
Sbjct: 369 ITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDS 428
Query: 405 VTFIGLLTACNHAGLVKEGEAYFNSMEKTYG 435
+ L N A G YF ++ +G
Sbjct: 429 HS---LTIIFNAASRDSSGLIYFRRGKEIHG 456
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/461 (26%), Positives = 220/461 (47%), Gaps = 19/461 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S++SLL T + LH ++ G D + + +Y++CG + A++VFDE
Sbjct: 123 SLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDET 182
Query: 64 S--ERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLV 117
S +++ W+++I+ + G + L F +M + P E +AS ++AC
Sbjct: 183 SLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEK 242
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G +H +K G + + + NSL++ Y K G A ++ ++VS+NA+IA
Sbjct: 243 YGAMVHGRIIKAGLEATN-LWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANE 301
Query: 178 ENQQPEKGFEVFKLMLR--QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+ + E +F+ ML+ + P+R +F L S + LR G +H + LE +
Sbjct: 302 QRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVD 361
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
+ N+++ YSK +G+A + F + +D+ISWN+ +A + +FK M
Sbjct: 362 TSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMML 421
Query: 296 DHGVRPDDFTFASILAAC----AGLASVQHGKQIHAHLIRMRLNQ---DVGVGNALVNMY 348
G+ PD + I A +GL + GK+IH +++R R+ + V NA++ MY
Sbjct: 422 S-GIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILR-RITPGGVSLSVSNAILKMY 479
Query: 349 AKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
AK I+ + K+F M +R+ SWN ++ ++ + L +F + G D V+
Sbjct: 480 AKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLS 539
Query: 409 GLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
LLT+C ++ G+ + + K + D H L+ +
Sbjct: 540 ILLTSCGRLVSLQLGKQFHAVVAKLFN-GQDCPHQDSLLSI 579
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 136/271 (50%), Gaps = 8/271 (2%)
Query: 255 AEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA 314
A++ F +D+ISW+ IAA S C ++ + +F++M + G++P+ F+ AS+L
Sbjct: 74 AQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGE-GLQPNGFSLASLLKVSC 132
Query: 315 GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE--MLHRNVVSW 372
+ +Q+H IR D G+ A + MY++CG++ + ++F+E +L +++ W
Sbjct: 133 STGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLW 192
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATG-IKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
N+IIAA+ H L+LF +M + G + P +T+ ++ AC +G K G +
Sbjct: 193 NSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRII 252
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
K + ++ + L+ G+ G L A + ++ +D + +++A R +
Sbjct: 253 KAGLEATNL--WNSLVTFYGKCGNLQHASQLFERISR-KDVVSWNAMIAANEQRGEGENA 309
Query: 492 ERLAKQLFHLQPTTTSPYV-LLSNLYASDGM 521
L +++ ++P V LS L A G+
Sbjct: 310 LGLFRRMLKVEPPVQPNRVTFLSLLSAVSGL 340
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 84/172 (48%), Gaps = 19/172 (11%)
Query: 325 IHAHLIRMRLN-QDVGVGNALVNMYAKCG--LIS--------CSYKLFNEMLHRNVVSWN 373
+H+HL +L Q+ G + + + C L+S C+ +LF+ +R+V+SW+
Sbjct: 31 LHSHLRNKQLEFQNHGFSSQFIFRCSACSKFLVSQSEHERLKCAQQLFDNFPNRDVISWS 90
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL-TACN--HAGLVKEGEAYFNSM 430
+IAA++ A LF++M G++P+ + LL +C+ GL ++ + S+
Sbjct: 91 ALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGW--SI 148
Query: 431 EKTYGISPDIEHFTCLIDLLGRAGKLLEAEE-YTKKFPLGQDPIVLGTLLSA 481
+G+ I I + R G L +A+ + + L D ++ ++++A
Sbjct: 149 RTGFGLDSGIR--AAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAA 198
>gi|297841909|ref|XP_002888836.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334677|gb|EFH65095.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 744
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 205/572 (35%), Positives = 328/572 (57%), Gaps = 36/572 (6%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLK--MGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++L C+ + L+ GI+LH +L +VI++N+++ +YAKCG ++ AR+VFD M
Sbjct: 63 AALFQACADQRNLRDGINLHHHMLSHPYCYSQNVILANYLITMYAKCGNILYARQVFDTM 122
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM--HLLPNEYIFASAISACAGIQSLVKGQQ 121
ERN+VSW+A+I+G+ QAG FS M H PNE+ +S ++ C G+Q
Sbjct: 123 PERNVVSWTALITGYAQAGNEQDGFCLFSSMLAHCCPNEFALSSVLTLC----RYEPGKQ 178
Query: 122 IHAYSLKFG-YASISFVGNSLISMYMKVGYSSDALLVYG--EAFE-PNLVSFNALIAGFV 177
+H +LK G Y SI +V N+LISMY + + A + EA E NLV++N++IA F
Sbjct: 179 VHGLALKLGLYCSI-YVANALISMYGRCHDGTAAYEAWTVFEAMEFKNLVTWNSMIAAFQ 237
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSV---SNDLRKGMI------LHCLTV 228
++ VF M G+ DR A L IC+ S+DL + LH LTV
Sbjct: 238 CCNLGKQAIGVFMRMHSDGVGFDR---ATVLNICTTLYKSSDLDPDQVSKCCLQLHSLTV 294
Query: 229 KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE----KDLISWNTFIAACSHCADYE 284
K L + V ++ +YS+ ++GE ++L E +D+++W I A + D E
Sbjct: 295 KSGLVTQTEVATALVKVYSE--ILGEFTDCYKLFMEMSHCRDIVAWTGIITAFA-VYDPE 351
Query: 285 KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNAL 344
+ + +F ++ ++ + PD +TF+S+L ACAGL + +H IHA +I+ D V N+L
Sbjct: 352 RAILLFGQLRHEK-LSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFATDTVVNNSL 410
Query: 345 VNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDS 404
++ YAKCG + ++F++M R+VVSWN+++ A++ H S L +F++M IKPDS
Sbjct: 411 IHAYAKCGSLDLCKRVFDDMDSRDVVSWNSLLKAYSLHGQVDSILPVFQKMD---IKPDS 467
Query: 405 VTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTK 464
TFI LL+AC+HAG VKEG F SM + P + H+ C+ID+LGRA + EAEE K
Sbjct: 468 ATFIALLSACSHAGRVKEGLRIFRSMFEKPETLPQLNHYACVIDMLGRAERFAEAEEVIK 527
Query: 465 KFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGD 524
+ P+G D +V TLL +CR + +G+ A +L ++PT + Y+ +SN+Y ++ + +
Sbjct: 528 QMPMGPDAVVWSTLLGSCRKHGNTQLGKLAADKLKEIEPTNSLSYIQMSNIYNAESSFNE 587
Query: 525 VAGARKMLKDSGLKKEPSYSMIEVQGTFEKFT 556
+ K ++ ++KEP S E+ +FT
Sbjct: 588 GNKSIKEMETWRVRKEPGLSCTEIGNKVHEFT 619
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 71/119 (59%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+L C+ + +S+HA V+K G D +V+N +++ YAKCG + L ++VFD+M
Sbjct: 371 TFSSVLKACAGLVTARHALSIHAQVIKGGFATDTVVNNSLIHAYAKCGSLDLCKRVFDDM 430
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQI 122
R++VSW++++ + G+ L F +M + P+ F + +SAC+ + +G +I
Sbjct: 431 DSRDVVSWNSLLKAYSLHGQVDSILPVFQKMDIKPDSATFIALLSACSHAGRVKEGLRI 489
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 14/141 (9%)
Query: 282 DYEKGLSVFK----EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR--LN 335
D + LS+F E+ + H +A++ ACA +++ G +H H++ +
Sbjct: 41 DLRRALSLFYCAPVELQSQHA-------YAALFQACADQRNLRDGINLHHHMLSHPYCYS 93
Query: 336 QDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM 395
Q+V + N L+ MYAKCG I + ++F+ M RNVVSW +I +A LF M
Sbjct: 94 QNVILANYLITMYAKCGNILYARQVFDTMPERNVVSWTALITGYAQAGNEQDGFCLFSSM 153
Query: 396 KATGIKPDSVTFIGLLTACNH 416
A P+ +LT C +
Sbjct: 154 LAHCC-PNEFALSSVLTLCRY 173
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 205/621 (33%), Positives = 321/621 (51%), Gaps = 73/621 (11%)
Query: 29 LKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE----- 83
LK + + N +++ YA+ G++ AR+VFDE+ N S++A++S H + G
Sbjct: 787 LKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADAR 846
Query: 84 ---HLL-----------------------ALEFFSQMH---LLPNEYIFASAISACAGIQ 114
H + AL F + MH + N Y FASA+SACA +
Sbjct: 847 ALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEK 906
Query: 115 SLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIA 174
G Q+HA K +A ++G++L+ MY K + +A V+ E N+VS+N+LI
Sbjct: 907 DSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLIT 966
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC-KLE 233
+ +N + +F M++ G +PD + A + C+ R+G +H VK +
Sbjct: 967 CYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFR 1026
Query: 234 SNPFVGNTIMALYSK----------FNLIG---------------------EAEKAFRLI 262
+ + N ++ +Y+K F+ + +A+ F +
Sbjct: 1027 EDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQM 1086
Query: 263 EEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG 322
EK++I+WN IAA + + E+ L +F + + V P +T+ ++L AC +A +Q G
Sbjct: 1087 VEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRE-SVWPTHYTYGNVLNACGNVADLQLG 1145
Query: 323 KQIHAHLIR--MRLN----QDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
+Q H H+++ R + DV VGN+LV+MY K G I K+F M R+ VSWN +I
Sbjct: 1146 QQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMI 1205
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
HA + AL LFE+M + PDSVT IG+L+AC H+GLV+EG YF SM + +GI
Sbjct: 1206 VGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGI 1265
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAK 496
P +H+TC+IDLLGRAG L E EE K+ + D ++ +LL +CRL ++V +GE A
Sbjct: 1266 IPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLHKNVEMGEWAAG 1325
Query: 497 QLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFT 556
+LF L P + PYVLLSN+YA G W DV R +K G+ K+P S IE+ F
Sbjct: 1326 KLFELDPRNSGPYVLLSNMYAELGKWADVFRVRSSMKHRGVSKQPGCSWIEIGRKVSVFL 1385
Query: 557 VAEFSHSKIGEINYMLKTLSL 577
+ H EI+ +L+ + +
Sbjct: 1386 ARDNGHPCKNEIHAILRIIQM 1406
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 164/553 (29%), Positives = 275/553 (49%), Gaps = 39/553 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++S+L C++ L LH + K Q +VI+ ++++Y C + AR+ FD++
Sbjct: 153 TMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDI 212
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
E N +SW+ ++ +H AG +A++ F +M + P Y + A+ AC +L +G+
Sbjct: 213 LEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGR 272
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYS----------------------------- 151
IHA+ L+ GY V +S++ MY K G
Sbjct: 273 CIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCG 332
Query: 152 --SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
+DA V+ E NLVS+NA++ G++ + +F+ M ++ D + L
Sbjct: 333 RIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLS 392
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKA--FRLIEEKDL 267
C+ D+ KG +H +KC S+P + N ++ +YSK + AE+ F + E+D
Sbjct: 393 ACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDS 452
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHA 327
SWN+ I+ + E L +M ++ V P+ TF+S LAACA + ++ G QIHA
Sbjct: 453 YSWNSLISGYERHSMSEAALYALTKMQSE--VTPNQSTFSSALAACANIFLLKQGMQIHA 510
Query: 328 HLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGS 387
++IR D + + L++MY KC S ++F R+V+ WN++I A G
Sbjct: 511 YMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEY 570
Query: 388 ALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLI 447
L LF++M+ GIK DSVTF+G L +C G V+ G +YF M I P IEH+ C+I
Sbjct: 571 GLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMMDE-SIIPRIEHYECMI 629
Query: 448 DLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTS 507
+LLG+ G ++E E++ + P + + CR + +GER AK + P T
Sbjct: 630 ELLGKHGCMVELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAKCINDSNPLTPV 689
Query: 508 PYVLLSNLYASDG 520
+V + ++DG
Sbjct: 690 QFVATVDYESNDG 702
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 202/420 (48%), Gaps = 40/420 (9%)
Query: 41 NHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL--- 97
N + A CG + AR++FD M R+ SW+A+I+ +AG AL FS M+ L
Sbjct: 89 NRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIR 148
Query: 98 PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV 157
P + AS +S CA L +Q+H + K + S +G +L+ +Y +DA
Sbjct: 149 PKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRA 208
Query: 158 YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDL 217
+ + EPN +S+N ++ + + ++F ML G+ P ++ + + C +N L
Sbjct: 209 FDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNAL 268
Query: 218 RKGMILHCLTVKCKLESNPFVGNTIMALYSK----------FNL---------------- 251
+G +H ++ E + V ++++ +Y+K FNL
Sbjct: 269 EEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGL 328
Query: 252 -----IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP-DDFT 305
I +A++ F ++E++L+SWN + D L +F++M + R D T
Sbjct: 329 ASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQE--TREFDAIT 386
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK--LFNE 363
S+L+AC G+ + G+++HA I+ + NALV MY+KCG + + + LF
Sbjct: 387 LGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEM 446
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
R+ SWN++I+ + H + +AL +M++ + P+ TF L AC + L+K+G
Sbjct: 447 GSERDSYSWNSLISGYERHSMSEAALYALTKMQSE-VTPNQSTFSSALAACANIFLLKQG 505
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 208/444 (46%), Gaps = 58/444 (13%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A S +S L C+ K + G+ +HA V K DV + + +L++YAKC AR+VF+
Sbjct: 892 AYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFE 951
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
M ERN+VSW+++I+ + Q G AL F M +P+E AS +SACAG+ + +
Sbjct: 952 AMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADRE 1011
Query: 119 GQQIHAYSLKFG-YASISFVGNSLISMYMKVGYS-------------------------- 151
G+Q+HA +K + + N+L+ MY K G +
Sbjct: 1012 GRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYA 1071
Query: 152 -----SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAG 206
DA +V+ + E N++++N LIA + +N + E+ +F + R+ + P +++
Sbjct: 1072 RSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGN 1131
Query: 207 GLEICSVSNDLRKGMILHCLTVKCKL------ESNPFVGNTIMALYSKFNLIGEAEKAFR 260
L C DL+ G H +K ES+ FVGN+++ +Y K I + K F
Sbjct: 1132 VLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFE 1191
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ +D +SWN I + + L +F+ M PD T +L+AC V+
Sbjct: 1192 RMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKE-SPDSVTMIGVLSACGHSGLVE 1250
Query: 321 HGKQIHAHLIRMRLNQDVGV------GNALVNMYAKCGLISCSYKLFNEM-LHRNVVSWN 373
G++ + +D G+ ++++ + G + +L EM + + V W
Sbjct: 1251 EGRRYF-----RSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWA 1305
Query: 374 TIIAA---HANHRLG-GSALKLFE 393
+++ + H N +G +A KLFE
Sbjct: 1306 SLLGSCRLHKNVEMGEWAAGKLFE 1329
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 120/223 (53%), Gaps = 4/223 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKV-- 59
A ++ S+L C+ + +G +HA +K G I+ N ++ +Y+KCG + A ++
Sbjct: 384 AITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLL 443
Query: 60 FDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH--LLPNEYIFASAISACAGIQSLV 117
F+ SER+ SW+++ISG+ + AL ++M + PN+ F+SA++ACA I L
Sbjct: 444 FEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQSEVTPNQSTFSSALAACANIFLLK 503
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+G QIHAY ++ GY + + LI MY K ++ ++ +++ +N++I G
Sbjct: 504 QGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCA 563
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKG 220
+ + E G ++F M +QG+ D +F G L C +R G
Sbjct: 564 YSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLG 606
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 118/229 (51%), Gaps = 3/229 (1%)
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ +A + F L+ +D SWN I A S + LS+F M N G+RP D T AS+L+
Sbjct: 101 VADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNM-NSLGIRPKDATMASVLS 159
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
CA + +Q+H H+ + +V +G ALV++Y C L++ + + F+++L N +S
Sbjct: 160 CCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILEPNAIS 219
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
WN I+ + +G A+ +F +M + G++P T + AC ++EG ++
Sbjct: 220 WNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRC-IHAFV 278
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+G + + ++D+ + G + A+ P+ +D ++ +++S
Sbjct: 279 LRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPM-KDMVMSTSIVS 326
>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
Length = 766
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 198/576 (34%), Positives = 315/576 (54%), Gaps = 15/576 (2%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
CS+ L G +HA +K D+IV N ++ +Y+K G + +F+ + +++L+SW
Sbjct: 158 CSELGDLGLGRQVHAQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISW 217
Query: 72 SAMISGHHQAGEHLLALEFFSQM------HLLPNEYIFASAISACAGI-QSLVKGQQIHA 124
++I+G Q G + AL+ F +M H PNE+ F S AC+ + SL G+QIH
Sbjct: 218 GSIIAGLAQQGREMDALQIFREMIAEGVHH--PNEFHFGSVFRACSVVVNSLEYGEQIHG 275
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
S+K+ S+ G SL MY + A V+ P+LVS+N+LI F +
Sbjct: 276 VSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSE 335
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
+F M GL PD + L C + L +G +H VK L + V N++++
Sbjct: 336 AMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLS 395
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP--D 302
+Y++ A F ++D+++WN+ + AC E VFK S H P D
Sbjct: 396 MYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQHLED---VFKLFSLLHRSMPSLD 452
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+ ++L+A A L + KQ+HA+ ++ L D + N L++ YAKCG + + KLF
Sbjct: 453 RISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLFE 512
Query: 363 EM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
M R+V SW+++I +A AL LF +M+ G+KP+ VTF+G+LTAC+ GLV
Sbjct: 513 IMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLTACSRVGLVD 572
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
EG Y++ M+ YGI P EH +C++DLL RAG+L EA ++ + P D I+ TLL+A
Sbjct: 573 EGCYYYSIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAKFVDQMPFEPDIIMWKTLLAA 632
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
R DV +G+R A+ + ++ P+ ++ YVLL N+YAS G W + A +K ++ SG++K P
Sbjct: 633 SRTHNDVDMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWNEFARLKKDMRSSGVQKSP 692
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
S I+++G + F V + SH + EI ML+ + L
Sbjct: 693 GKSWIKLKGELKVFIVEDRSHPESDEIYTMLEVIGL 728
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 152/481 (31%), Positives = 257/481 (53%), Gaps = 18/481 (3%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQP-----DVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
CS+ ++L QG +H +L + + I+SNH++ +Y +CG AR VFD M +R
Sbjct: 52 CSRLRSLPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGMLDR 111
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
N VSW+A+I+ H Q A+ FS M +P+++ SAI AC+ + L G+Q+H
Sbjct: 112 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQVH 171
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A ++K+ S V N+L++MY K G D ++ + +L+S+ ++IAG + +
Sbjct: 172 AQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGREM 231
Query: 184 KGFEVFKLMLRQGL-LPDRFSFAGGLEICS-VSNDLRKGMILHCLTVKCKLESNPFVGNT 241
++F+ M+ +G+ P+ F F CS V N L G +H ++VK +L+ N + G +
Sbjct: 232 DALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAGCS 291
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+ +Y++ N + A K F IE DL+SWN+ I A S + + +F EM D G+RP
Sbjct: 292 LSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEM-RDSGLRP 350
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D T ++L AC G ++ G+ IH++L+++ L DV V N+L++MYA+C S + +F
Sbjct: 351 DGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVF 410
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG--- 418
+E R+VV+WN+I+ A H+ KLF + + D ++ +L+A G
Sbjct: 411 HETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSLDRISLNNVLSASAELGYFE 470
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
+VK+ AY + G+ D LID + G L +A + + G+D +L
Sbjct: 471 MVKQVHAYAFKV----GLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSL 526
Query: 479 L 479
+
Sbjct: 527 I 527
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 199/380 (52%), Gaps = 10/380 (2%)
Query: 110 CAGIQSLVKGQQIHAYSL------KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE 163
C+ ++SL +G+ +H + L +F A + + N LI+MY + G A +V+ +
Sbjct: 52 CSRLRSLPQGRLVHRHLLASSARDRF-LAHNTILSNHLITMYGRCGAPDSARVVFDGMLD 110
Query: 164 PNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMIL 223
N VS+ A+IA +N + +F MLR G +PD+F+ + CS DL G +
Sbjct: 111 RNPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQV 170
Query: 224 HCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY 283
H +K + S+ V N ++ +YSK +G+ F I +KDLISW + IA +
Sbjct: 171 HAQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGRE 230
Query: 284 EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA-SVQHGKQIHAHLIRMRLNQDVGVGN 342
L +F+EM + P++F F S+ AC+ + S+++G+QIH ++ +L+++ G
Sbjct: 231 MDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAGC 290
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
+L +MYA+C + + K+F + ++VSWN++I A + L A+ LF +M+ +G++P
Sbjct: 291 SLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRP 350
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
D +T + LL AC + +G + + + K G+ D+ L+ + R A +
Sbjct: 351 DGITVMALLCACVGYDALHQGRSIHSYLVKL-GLGGDVIVSNSLLSMYARCLDFSSAMDV 409
Query: 463 TKKFPLGQDPIVLGTLLSAC 482
+ +D + ++L+AC
Sbjct: 410 FHE-THDRDVVTWNSILTAC 428
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 187/576 (32%), Positives = 314/576 (54%), Gaps = 12/576 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+SL+ + L+Q +HA +L +G+Q + +++ + G + AR+VFD++
Sbjct: 25 ASLIDSSTHKAQLRQ---IHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPR 81
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQI 122
+ W+A+I G+ + AL +S+M L P+ + F + AC G+ L G+ +
Sbjct: 82 PQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFV 141
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF---EPNLVSFNALIAGFVEN 179
HA + G+ + FV N LI++Y K A V+ E E +VS+ A+++ + +N
Sbjct: 142 HAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVF-EGLPLPERTIVSWTAIVSAYAQN 200
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+P + E+F M + + PD + L + DL +G +H +K LE+ P +
Sbjct: 201 GEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLL 260
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ +Y+K + A+ F ++ +LI WN I+ + + + +F EM N V
Sbjct: 261 ISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINK-DV 319
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
RPD + S ++ACA + S++ + + ++ R DV + +AL++M+AKCG + C+
Sbjct: 320 RPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARS 379
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F+ L R+VV W+ +I + H A+ L+ M+ G+ P+ VTF+GLL ACNH+G+
Sbjct: 380 VFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGM 439
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V+EG +FN M + I+P +H+ C+IDLLGRAG L +A E K P+ V G LL
Sbjct: 440 VREGWWFFNRMAD-HKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALL 498
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
SAC+ R V +G+ A+QLF + P+ T YV LSNLYA+ +W VA R +K+ GL K
Sbjct: 499 SACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNK 558
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ S +EV+G E F V + SH + EI ++ +
Sbjct: 559 DVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWI 594
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 176/348 (50%), Gaps = 22/348 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQ--PDVIVSNHVLNLYAKCGKMILARKVFD 61
++ S+L+ + + L+QG S+HA+V+KMG++ PD+++S + +YAKCG++ A+ +FD
Sbjct: 224 ALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLIS--LNTMYAKCGQVATAKILFD 281
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
+M NL+ W+AMISG+ + G A++ F +M + P+ SAISACA + SL +
Sbjct: 282 KMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQ 341
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+ + Y + Y F+ ++LI M+ K G A V+ + ++V ++A+I G+
Sbjct: 342 ARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGL 401
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ Q + +++ M R G+ P+ +F G L C+ S +R+G K+
Sbjct: 402 HGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQH 461
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIE----EKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
I+ L + G ++A+ +I+ + + W ++AC E G +++
Sbjct: 462 YACIIDLLGR---AGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLF 518
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR---LNQDVG 339
+ + S L A A L ++ +RM+ LN+DVG
Sbjct: 519 SIDPSNTGHYVQLSNLYAAARL-----WDRVAEVRVRMKEKGLNKDVG 561
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 183/575 (31%), Positives = 325/575 (56%), Gaps = 4/575 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++ L C+ L G+ LH+ +K G++ +V V+N +L++YAKC + A ++F+ +
Sbjct: 244 TLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELL 303
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+LV+W+ MISG Q G AL F M P+ S + A + L +G+
Sbjct: 304 PRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGK 363
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H Y ++ +F+ ++L+ +Y K A +Y A ++V + +I+G+V N
Sbjct: 364 EVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNG 423
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
EK ++F+ +L Q + P+ + A L C+ + L G +H ++ E +V +
Sbjct: 424 MSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVES 483
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+M +Y+K + + F + KD ++WN+ I++ S + ++ L +F++M + G++
Sbjct: 484 ALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCME-GIK 542
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
++ T +S L+ACA L ++ +GK+IH +I+ + D+ +AL++MYAKCG + + ++
Sbjct: 543 YNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRV 602
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F M +N VSWN+II+A+ H L ++ +M+ G KPD VTF+ L++AC HAGLV
Sbjct: 603 FEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLV 662
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+EG F M K Y I+P +EHF C++DL R+G+L +A ++ P D + G LL
Sbjct: 663 EEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLH 722
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ R+V + + +++LF L P + YVL+SN+ A G W V+ R+++KD+ + K
Sbjct: 723 ACRVHRNVELADIASQELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKI 782
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P YS ++V + F ++ SH + +I LK L
Sbjct: 783 PGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKAL 817
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 233/458 (50%), Gaps = 5/458 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++ ++ C+ A+ G +H G+ DV V + ++ +Y+ G + AR FD
Sbjct: 141 AHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFD 200
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVK 118
M R+ V W+ M+ G+ +AG+ A+ F M + PN A +S CA L+
Sbjct: 201 GMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLS 260
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G Q+H+ ++K G V N+L+SMY K DA ++ +LV++N +I+G V+
Sbjct: 261 GVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQ 320
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N ++ +F MLR G PD + L + N L++G +H ++ + + F+
Sbjct: 321 NGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFL 380
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
+ ++ +Y K + A + D++ +T I+ EK L +F+ + +
Sbjct: 381 VSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLL-EQC 439
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
++P+ T AS+L ACA ++++ G++IH +++R V +AL++MYAKCG + S+
Sbjct: 440 IKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSH 499
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+F++M ++ V+WN++I++ + + AL LF QM GIK ++VT L+AC
Sbjct: 500 YIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLP 559
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+ G+ + K I DI + LID+ + G +
Sbjct: 560 AIYYGKEIHGVIIKG-PIKADIFAESALIDMYAKCGNM 596
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/497 (26%), Positives = 242/497 (48%), Gaps = 26/497 (5%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHV-LNLYAKC-GKMILARKV 59
A + +LL C L G+ +HA + G +SNH L L+ + G +LAR+
Sbjct: 32 ADRLLALLRGCVSAPHLPLGLQIHARAVVSGA-----LSNHNHLALHTRLLGMYVLARRF 86
Query: 60 FDEMS---------ERNLVSWSAMISGHHQAGEHLLALEFFSQMHL-----LPNEYIFAS 105
D ++ + + W+ +I G AG H LA+ F+ +M P+ +
Sbjct: 87 RDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPY 146
Query: 106 AISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPN 165
+ +CA + ++ G+ +H + G AS +VG++LI MY G DA + +
Sbjct: 147 VVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRD 206
Query: 166 LVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHC 225
V +N ++ G+++ +F+ M G P+ + A L +C+ DL G+ LH
Sbjct: 207 CVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHS 266
Query: 226 LTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEK 285
L VKC LE V NT++++Y+K + +A + F L+ DL++WN I+ C ++
Sbjct: 267 LAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDE 326
Query: 286 GLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALV 345
L +F +M G RPD T S+L A L ++ GK++H ++IR ++ D + +ALV
Sbjct: 327 ALGLFCDMLRS-GARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALV 385
Query: 346 NMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV 405
++Y KC + + L++ +VV +T+I+ + + + AL++F + IKP++V
Sbjct: 386 DIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAV 445
Query: 406 TFIGLLTACNHAGLVKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTK 464
T +L AC + G E + + Y +E + L+D+ + G+L +
Sbjct: 446 TVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVE--SALMDMYAKCGRLDLSHYIFS 503
Query: 465 KFPLGQDPIVLGTLLSA 481
K L +D + +++S+
Sbjct: 504 KMSL-KDEVTWNSMISS 519
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 194/609 (31%), Positives = 314/609 (51%), Gaps = 71/609 (11%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQP-DVIVSNHVLNLYAKCGKMILARKVF 60
+++ + L+ C +T + Q L + + QP D + N +L+LYAK GK+ A+ +F
Sbjct: 22 SEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLF 81
Query: 61 DEMSERNLVSWSAMISGHHQAG--EHLLA-----------------------------LE 89
D+M +R++ SW+A++S + ++G ++L A LE
Sbjct: 82 DKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLE 141
Query: 90 FFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYM 146
F +M P EY S ++A A + L G+QIH + + F+ N+L MY
Sbjct: 142 LFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYA 201
Query: 147 KVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAG 206
K G A ++ + NLVS+N +I+G+ +N QPEK + M G +PD+ + +
Sbjct: 202 KCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMS- 260
Query: 207 GLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKD 266
TI+A Y + + EA + F +EKD
Sbjct: 261 ----------------------------------TIIAAYCQCGRVDEARRVFSEFKEKD 286
Query: 267 LISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
++ W + + E L +F EM +H + PD +T +S++++CA LAS+ HG+ +H
Sbjct: 287 IVCWTAMMVGYAKNGREEDALLLFNEMLLEH-IEPDSYTLSSVVSSCAKLASLHHGQAVH 345
Query: 327 AHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGG 386
I LN ++ V +AL++MY+KCG I + +FN M RNVVSWN +I A +
Sbjct: 346 GKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDK 405
Query: 387 SALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCL 446
AL+LFE M KPD+VTFIG+L+AC H +++G+ YF+S+ +G++P ++H+ C+
Sbjct: 406 DALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACM 465
Query: 447 IDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTT 506
++LLGR G++ +A K D ++ TLLS C + D+V E A+ LF L PT
Sbjct: 466 VNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIA 525
Query: 507 SPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIG 566
PY++LSN+YAS G W DVA R ++K +KK +S IE+ +FT + +H +
Sbjct: 526 VPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESE 585
Query: 567 EINYMLKTL 575
+I L L
Sbjct: 586 DIYEKLNML 594
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 183/545 (33%), Positives = 297/545 (54%), Gaps = 5/545 (0%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM- 94
+V V +LN+Y K G + AR+VFD M +RN SWS M++G+ A + F M
Sbjct: 152 NVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLML 211
Query: 95 HLLPNE---YIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
P+E ++ + +SA + L+ G+Q+H +K G V NSL++MY K G
Sbjct: 212 EECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCM 271
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
A V+ + E N ++++A+I G+ +N + + +F M G P F+F G L
Sbjct: 272 GAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNAS 331
Query: 212 SVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
S L G H L VK E +V + ++ +Y+K I +A++ F + E D++ W
Sbjct: 332 SDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWT 391
Query: 272 TFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
++ ++E+ L+++ M + G+ P T AS L ACAG+A+++ GKQ+H +++
Sbjct: 392 AMVSGHVQNGEHEEALTLYARMDKE-GIIPSKSTIASGLRACAGIAALEPGKQLHTQIVK 450
Query: 332 MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
L VG+AL MY+KCG + +F + R+V++WN+II+ + + G AL L
Sbjct: 451 YGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDL 510
Query: 392 FEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLG 451
FE+MK G PD++TFI +L AC+H GLV G YF+ M K YG++P ++H+ C++D+L
Sbjct: 511 FEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILS 570
Query: 452 RAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVL 511
RAG L EA+++ + + + +L ACR RD +G ++L L +S Y+L
Sbjct: 571 RAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYIL 630
Query: 512 LSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYM 571
LSN+YAS W DV R +++ G+ K+P S +E+ F V E H + IN
Sbjct: 631 LSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQ 690
Query: 572 LKTLS 576
L+ L+
Sbjct: 691 LRRLA 695
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 137/477 (28%), Positives = 236/477 (49%), Gaps = 24/477 (5%)
Query: 19 QQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILAR--KVFDEM--SERNLVSWSAM 74
+ G +LHA LK G V+N ++N Y+ + +LA VFD++ + R++ SW+++
Sbjct: 29 RHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWNSL 88
Query: 75 ---ISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIHAYSL 127
+SGH L AL F M +LP+ + FA+A +A A S G HA +
Sbjct: 89 LNPLSGHRP----LDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALAC 144
Query: 128 KFGYA-SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
K A S +V SL++MY K+G SDA V+ + N S++ ++AG+ + E+ F
Sbjct: 145 KIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAF 204
Query: 187 EVFKLMLRQGLLP---DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
++F+LML + P F L SV L G +H L VK L V N+++
Sbjct: 205 DLFRLMLEE--CPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLV 262
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K +G A F E++ I+W+ I + + + +S+F +M + G P +
Sbjct: 263 TMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQM-HAAGFTPTE 321
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
FTF +L A + L ++ GKQ H ++++ + V +ALV+MYAKCG I+ + + F++
Sbjct: 322 FTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQ 381
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
+ ++V W +++ H + AL L+ +M GI P T L AC ++ G
Sbjct: 382 LYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPG 441
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+ + K YG+ + L + + G L + ++ P +D I +++S
Sbjct: 442 KQLHTQIVK-YGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIP-DRDVIAWNSIIS 496
>gi|255559012|ref|XP_002520529.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540371|gb|EEF41942.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 181/551 (32%), Positives = 308/551 (55%), Gaps = 25/551 (4%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
I+ ++ C+K + GI LH+ +++MG +V + + V+++YAKC ++ A +VF+EM
Sbjct: 72 INKVVSFCAKFASYDLGIQLHSTIIRMGFTSNVHICSAVVDMYAKCSEIQSAHEVFNEMP 131
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPN-------EYIFASAISACAGIQSLV 117
ERN V+W+++I G+ ++++P + ++ + C+ ++
Sbjct: 132 ERNDVTWNSLIFGY---------------LNVMPTCAMRGVTSFSVSTCLVVCSQLEVRN 176
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G Q+H SLK G+ + FVG +LI MY K D+ V+ + N+V++ A++ +
Sbjct: 177 FGAQVHGLSLKLGFDNNVFVGTALIDMYSKCDGVDDSWRVFDYMVDKNVVTWTAMVTAYA 236
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+N+QP++ + + M+R G+ + ++ L S ++ +HC ++C LE N +
Sbjct: 237 QNEQPDEAMILVREMMRLGIKANYVTYNSLLSSFSGPKYMQYCKQVHCSIIRCGLECNLY 296
Query: 238 VGNTIMALYSK-FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
+ T++ +YSK N + + K ++ D ISWN IA S+ E L F EM +
Sbjct: 297 IAATLVTVYSKCTNNLEDFNKISSGVQLSDQISWNAVIAGYSNLGLGEDALKCFCEMRHA 356
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
+ ++ D +TF S+L A +++ G+++HA +++ V V N LV+MYA+CG I
Sbjct: 357 N-IKMDFYTFTSLLGAIGAFLAIEEGREMHALIVKTGYASSVYVQNGLVSMYARCGAIDD 415
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
S ++F M +VVSWN ++ A+H G A++LFEQM+ T IKP+S TF+ +L+AC+H
Sbjct: 416 SKRVFWLMEDHDVVSWNALLTGCAHHGFGNEAVELFEQMRKTKIKPNSTTFLAVLSACSH 475
Query: 417 AGLVKEGEAYFNSMEKTYGISP-DIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
G V +G YF+ M + P +EH+ ++D+ GRAG L EAE P+ P V
Sbjct: 476 VGSVDKGLEYFDFMRSDISLEPLRVEHYASVVDIFGRAGYLSEAEAIINCMPMDPGPSVY 535
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
LLSAC + + I R A++L L P + Y+LLSN+ A++G W D A RK++ D
Sbjct: 536 KALLSACLVHGNREIAVRSARKLLELWPDDPATYILLSNMLATEGYWDDAADVRKLMCDR 595
Query: 536 GLKKEPSYSMI 546
G++K P YS I
Sbjct: 596 GVRKNPGYSWI 606
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 194/390 (49%), Gaps = 25/390 (6%)
Query: 99 NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY 158
N Y +S CA S G Q+H+ ++ G+ S + ++++ MY K A V+
Sbjct: 68 NPYFINKVVSFCAKFASYDLGIQLHSTIIRMGFTSNVHICSAVVDMYAKCSEIQSAHEVF 127
Query: 159 GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLR 218
E E N V++N+LI G++ N P +G+ FS + L +CS
Sbjct: 128 NEMPERNDVTWNSLIFGYL-NVMPTCAM--------RGVTS--FSVSTCLVVCSQLEVRN 176
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
G +H L++K ++N FVG ++ +YSK + + ++ + F + +K++++W + A +
Sbjct: 177 FGAQVHGLSLKLGFDNNVFVGTALIDMYSKCDGVDDSWRVFDYMVDKNVVTWTAMVTAYA 236
Query: 279 HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
++ + + +EM G++ + T+ S+L++ +G +Q+ KQ+H +IR L ++
Sbjct: 237 QNEQPDEAMILVREMMR-LGIKANYVTYNSLLSSFSGPKYMQYCKQVHCSIIRCGLECNL 295
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLH----RNVVSWNTIIAAHANHRLGGSALKLFEQ 394
+ LV +Y+KC + + + FN++ + +SWN +IA ++N LG ALK F +
Sbjct: 296 YIAATLVTVYSKC---TNNLEDFNKISSGVQLSDQISWNAVIAGYSNLGLGEDALKCFCE 352
Query: 395 MKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
M+ IK D TF LL A ++EG + KT G + + L+ + R G
Sbjct: 353 MRHANIKMDFYTFTSLLGAIGAFLAIEEGREMHALIVKT-GYASSVYVQNGLVSMYARCG 411
Query: 455 KLLEAEEYTKKFPLGQDPIVL--GTLLSAC 482
+ ++ + F L +D V+ LL+ C
Sbjct: 412 AI---DDSKRVFWLMEDHDVVSWNALLTGC 438
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 169/323 (52%), Gaps = 5/323 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+S+ L CS+ + G +H LK+G +V V ++++Y+KC + + +VFD M
Sbjct: 161 SVSTCLVVCSQLEVRNFGAQVHGLSLKLGFDNNVFVGTALIDMYSKCDGVDDSWRVFDYM 220
Query: 64 SERNLVSWSAMISGH---HQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
++N+V+W+AM++ + Q E ++ + ++ + N + S +S+ +G + + +
Sbjct: 221 VDKNVVTWTAMVTAYAQNEQPDEAMILVREMMRLGIKANYVTYNSLLSSFSGPKYMQYCK 280
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE-PNLVSFNALIAGFVEN 179
Q+H ++ G ++ +L+++Y K + + + + +S+NA+IAG+
Sbjct: 281 QVHCSIIRCGLECNLYIAATLVTVYSKCTNNLEDFNKISSGVQLSDQISWNAVIAGYSNL 340
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
E + F M + D ++F L + +G +H L VK S+ +V
Sbjct: 341 GLGEDALKCFCEMRHANIKMDFYTFTSLLGAIGAFLAIEEGREMHALIVKTGYASSVYVQ 400
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N ++++Y++ I ++++ F L+E+ D++SWN + C+H + + +F++M +
Sbjct: 401 NGLVSMYARCGAIDDSKRVFWLMEDHDVVSWNALLTGCAHHGFGNEAVELFEQMRKTK-I 459
Query: 300 RPDDFTFASILAACAGLASVQHG 322
+P+ TF ++L+AC+ + SV G
Sbjct: 460 KPNSTTFLAVLSACSHVGSVDKG 482
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 115/227 (50%), Gaps = 12/227 (5%)
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
++F +LR G + + + C+ G+ LH ++ SN + + ++ +Y
Sbjct: 55 DLFAHLLRNGSFSNPYFINKVVSFCAKFASYDLGIQLHSTIIRMGFTSNVHICSAVVDMY 114
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
+K + I A + F + E++ ++WN+ I L+V + GV F+
Sbjct: 115 AKCSEIQSAHEVFNEMPERNDVTWNSLIFG---------YLNVMPTCAM-RGVT--SFSV 162
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
++ L C+ L G Q+H +++ + +V VG AL++MY+KC + S+++F+ M+
Sbjct: 163 STCLVVCSQLEVRNFGAQVHGLSLKLGFDNNVFVGTALIDMYSKCDGVDDSWRVFDYMVD 222
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+NVV+W ++ A+A + A+ L +M GIK + VT+ LL++
Sbjct: 223 KNVVTWTAMVTAYAQNEQPDEAMILVREMMRLGIKANYVTYNSLLSS 269
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 106/209 (50%), Gaps = 20/209 (9%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +SLL A+++G +HA ++K G V V N ++++YA+CG + +++VF M
Sbjct: 364 TFTSLLGAIGAFLAIEEGREMHALIVKTGYASSVYVQNGLVSMYARCGAIDDSKRVFWLM 423
Query: 64 SERNLVSWSAMISG--HHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
+ ++VSW+A+++G HH G A+E F QM + PN F + +SAC+ + S+ K
Sbjct: 424 EDHDVVSWNALLTGCAHHGFGNE--AVELFEQMRKTKIKPNSTTFLAVLSACSHVGSVDK 481
Query: 119 GQQIHAYSLKFGYASISFVG------NSLISMYMKVGYSSDA-LLVYGEAFEPNLVSFNA 171
G + F + IS S++ ++ + GY S+A ++ +P + A
Sbjct: 482 GLEY----FDFMRSDISLEPLRVEHYASVVDIFGRAGYLSEAEAIINCMPMDPGPSVYKA 537
Query: 172 LIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
L++ + + E + +L L PD
Sbjct: 538 LLSACLVHGNREIAVRSARKLLE--LWPD 564
>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 788
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 181/567 (31%), Positives = 325/567 (57%), Gaps = 11/567 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQP-DVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+L C++ AL +G + H+A +++G+ DV N +L YA+ G + A +VFD M R
Sbjct: 114 VLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVFDGMPAR 173
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQQI 122
++V+W++M+ G+ G LAL F +MH + + +A++AC +L++G+++
Sbjct: 174 DVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLESALMQGREV 233
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
HAY ++ G VG S++ MY K G + A V+ +V++N +I G+ N++P
Sbjct: 234 HAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERP 293
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E+ F+ F M +G + + L C+ + G +H + + + + +
Sbjct: 294 EEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETAL 353
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +YSK + +EK F + K L+SWN IAA + Y + +++F ++ N + PD
Sbjct: 354 LEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLN-QPLYPD 412
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
FT ++++ A L ++ +Q+H+++IR+ ++ + NA+++MYA+CG + S ++F+
Sbjct: 413 YFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSSREIFD 472
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+M ++V+SWNT+I +A H G SAL++F +MK G++P+ TF+ +LTAC+ +GL E
Sbjct: 473 KMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTACSVSGLTDE 532
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G FNSM++ YG+ P IEH+ C+ DLLGRAG L E ++ + P+ V G+LL+A
Sbjct: 533 GWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFIENMPIDPTFRVWGSLLTAS 592
Query: 483 RLRRDVVIGERLAKQLFHLQP-----TTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
R R D+ I E A+++F L+ T YVL+S++YA G W DV + ++++ GL
Sbjct: 593 RNRNDIDIAEYAAERIFQLEQDQLEHDNTGCYVLISSMYADAGRWKDVERIKSLMEEKGL 652
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSK 564
++ S++E+ G F + +H +
Sbjct: 653 RRTDPRSIVELHGISCSFVNGDTTHPQ 679
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 157/313 (50%), Gaps = 4/313 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
I + L C AL QG +HA V++ G++ DV V +L++Y KCG + A VF M
Sbjct: 214 IIAALAACCLESALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMP 273
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAI---SACAGIQSLVKGQQ 121
R +V+W+ MI G+ A + F QM ++ +AI +ACA +S + G+
Sbjct: 274 SRTVVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRS 333
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H Y + + + +L+ MY KVG + V+G+ LVS+N +IA ++ +
Sbjct: 334 VHGYITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEM 393
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ +F +L Q L PD F+ + + + LR+ +H ++ N + N
Sbjct: 394 YMEAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNA 453
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
IM +Y++ + + + F + KD+ISWNT I + L +F EM + G+RP
Sbjct: 454 IMHMYARCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCN-GLRP 512
Query: 302 DDFTFASILAACA 314
++ TF S+L AC+
Sbjct: 513 NESTFVSVLTACS 525
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 157/323 (48%), Gaps = 2/323 (0%)
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
SL+ + G DA A + N +I G + P + ML G P
Sbjct: 47 SLVLSHAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAGARP 106
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL-ESNPFVGNTIMALYSKFNLIGEAEKA 258
DRF+F L+ C+ L +G H ++ + ++ + GN+++A Y++ L+ +AE+
Sbjct: 107 DRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERV 166
Query: 259 FRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
F + +D+++WN+ + L F+EM V+ D + LAAC ++
Sbjct: 167 FDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLESA 226
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA 378
+ G+++HA++IR + DV VG ++++MY KCG I+ + +F M R VV+WN +I
Sbjct: 227 LMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGG 286
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISP 438
+A + A F QMKA G + + VT I LL AC G + + + + P
Sbjct: 287 YALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFL-P 345
Query: 439 DIEHFTCLIDLLGRAGKLLEAEE 461
+ T L+++ + GK+ +E+
Sbjct: 346 HVVLETALLEMYSKVGKVKSSEK 368
>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Vitis vinifera]
Length = 773
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 198/577 (34%), Positives = 317/577 (54%), Gaps = 9/577 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S +L C + L +G +H V+K G DV V ++++Y++CG + A KV+ +
Sbjct: 181 TCSVILQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNL 240
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL-----PNEYIFASAISACAGIQSLVK 118
+ +++ + MIS + +AG A+ F +HLL PN+Y F + ISAC G +
Sbjct: 241 AYKDVRCLNFMISEYGKAGCGEKAIGVF--LHLLGSGLEPNDYTFTNVISACNGDIDVEV 298
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+ +H +K G VGN+++S+Y+K G +A + E NLVS+ AL++G+V+
Sbjct: 299 LRVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVK 358
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N +K E F +L G+ D FA L+ CS +L G+ +H VK + V
Sbjct: 359 NGNGKKALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSV 418
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
G ++ LY+K + A F + +K+++S+N ++ AD E +++F ++
Sbjct: 419 GTALIDLYAKCRKLRSARLVFHSLLDKNIVSFNAILSGYIG-ADEEDAMALFSQLRLAD- 476
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
++PD TFA +L+ A A + GK +HA++I+ + VGNA++ MYAKCG I +
Sbjct: 477 IKPDSVTFARLLSLSADQACLVKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDAC 536
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+LF M + + +SWN +I+A+A H G AL LFE+MK PD +T + +L AC+++G
Sbjct: 537 QLFYSMNYLDSISWNAVISAYALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSG 596
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
L++EG FN ME YGI P+IEHF C++DLLGRAG L EA + + P P++ TL
Sbjct: 597 LLEEGFCLFNDMESKYGIKPEIEHFACMVDLLGRAGYLSEAMSFINRSPFSGSPLLWRTL 656
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
+ C+L D+ G+ +K L L P Y+L+SNLYA GM + A R ++ D +
Sbjct: 657 VHVCKLHGDLNFGQIASKHLLDLAPEEAGSYILVSNLYAGGGMLNEAARVRTVMNDLKVS 716
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KE S IE+ +F ++ H + EI L L
Sbjct: 717 KEAGSSWIEIDNKVHQFVASDKDHPESKEIYAKLDLL 753
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 149/494 (30%), Positives = 264/494 (53%), Gaps = 21/494 (4%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L G ++HA + K+G Q D N+++NLY K K+ A+ VFDEM RN ++W+ +I G
Sbjct: 94 LMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKG 153
Query: 78 HHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
H Q + +M+ + NE+ + + AC +++LV+G+QIH + +K G+
Sbjct: 154 HLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDED 213
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
FVG SLISMY + G A VY ++ N +I+ + + EK VF +L
Sbjct: 214 VFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHLLG 273
Query: 195 QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGE 254
GL P+ ++F + C+ D+ +LH + +KC VGN I+++Y K ++ E
Sbjct: 274 SGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEE 333
Query: 255 AEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA 314
AEK+F + E++L+SW ++ + +K L F ++ + GV D FA++L C+
Sbjct: 334 AEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQIL-ELGVGFDSCCFATLLDGCS 392
Query: 315 GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNT 374
++ G QIH ++++ DV VG AL+++YAKC + + +F+ +L +N+VS+N
Sbjct: 393 ECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDKNIVSFNA 452
Query: 375 IIAAH--ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT-ACNHAGLVKEGEAYFNSME 431
I++ + A+ A+ LF Q++ IKPDSVTF LL+ + + A LVK + ++
Sbjct: 453 ILSGYIGADEE---DAMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKCLHAYIIK 509
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEE--YTKKFPLGQDPIVLGTLLSACRL----R 485
+ +P + + +I + + G + +A + Y+ + D I ++SA L R
Sbjct: 510 TGFEANPSVGN--AVITMYAKCGSIGDACQLFYSMNY---LDSISWNAVISAYALHGQGR 564
Query: 486 RDVVIGERLAKQLF 499
+ +++ E + K+ F
Sbjct: 565 KALILFEEMKKEEF 578
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 174/349 (49%), Gaps = 2/349 (0%)
Query: 112 GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNA 171
G L+ GQ IHA+ K GY + +F GN+L+++Y K DA V+ E N +++
Sbjct: 90 GSGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTT 149
Query: 172 LIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK 231
LI G ++ E F + + M G + + + L+ C +L +G +H +K
Sbjct: 150 LIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKRG 209
Query: 232 LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK 291
+ + FVG +++++YS+ +G AEK + + KD+ N I+ EK + VF
Sbjct: 210 FDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFL 269
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
+ G+ P+D+TF ++++AC G V+ + +H I+ ++ VGNA+V++Y K
Sbjct: 270 HLLGS-GLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKH 328
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
G++ + K F M RN+VSW +++ + + G AL+ F Q+ G+ DS F LL
Sbjct: 329 GMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLL 388
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
C+ + G + K G D+ T LIDL + KL A
Sbjct: 389 DGCSECKNLGLGLQIHGFVVKL-GYVHDVSVGTALIDLYAKCRKLRSAR 436
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 115/208 (55%), Gaps = 1/208 (0%)
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDL 267
L+I S DL G +H K +++ F GN ++ LY KFN +G+A+ F + ++
Sbjct: 85 LQISIGSGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNT 144
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHA 327
I+W T I D E + +EM G ++ T + IL AC L ++ G+QIH
Sbjct: 145 ITWTTLIKGHLQVNDVESVFRIAREMYW-VGEEFNEHTCSVILQACDSLENLVRGEQIHG 203
Query: 328 HLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGS 387
+I+ ++DV VG +L++MY++CG + + K+++ + +++V N +I+ + G
Sbjct: 204 FVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEK 263
Query: 388 ALKLFEQMKATGIKPDSVTFIGLLTACN 415
A+ +F + +G++P+ TF +++ACN
Sbjct: 264 AIGVFLHLLGSGLEPNDYTFTNVISACN 291
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 1/156 (0%)
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
+ +L G + G+ IHA L ++ D GN LVN+Y K + + +F+EML
Sbjct: 81 WPQLLQISIGSGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEML 140
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
RN ++W T+I H S ++ +M G + + T +L AC+ + GE
Sbjct: 141 VRNTITWTTLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQ 200
Query: 426 YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ K G D+ T LI + R G L AE+
Sbjct: 201 IHGFVIKR-GFDEDVFVGTSLISMYSRCGDLGAAEK 235
>gi|15218851|ref|NP_171853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180299|sp|Q9LR69.1|PPR8_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g03540
gi|9280645|gb|AAF86514.1|AC002560_7 F21B7.16 [Arabidopsis thaliana]
gi|91805735|gb|ABE65596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189463|gb|AEE27584.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 609
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 190/553 (34%), Positives = 306/553 (55%), Gaps = 11/553 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGK-MILARKVFD 61
K +SLL C+K + GI HA V+K G++ D V N +L+LY K G M R+VFD
Sbjct: 62 KLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFD 121
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
++ +SW++M+SG+ EH+ ALE F +M L NE+ +SA+ AC+ + +
Sbjct: 122 GRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRL 181
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ H + G+ F+ ++L +Y DA V+ E EP+++ + A+++ F +
Sbjct: 182 GRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSK 241
Query: 179 NQQPEKGFEVFKLMLR-QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
N E+ +F M R +GL+PD +F L C L++G +H + + SN
Sbjct: 242 NDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVV 301
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V ++++ +Y K + EA + F + +K+ +SW+ + ++EK + +F+EM
Sbjct: 302 VESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK- 360
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
D + F ++L ACAGLA+V+ GK+IH +R +V V +AL+++Y K G I +
Sbjct: 361 ----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSA 416
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+++++M RN+++WN +++A A + G A+ F M GIKPD ++FI +LTAC H
Sbjct: 417 SRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHT 476
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
G+V EG YF M K+YGI P EH++C+IDLLGRAG EAE ++ D + G
Sbjct: 477 GMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGV 536
Query: 478 LLSACRLRRDVV-IGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSG 536
LL C D + ER+AK++ L+P YVLLSN+Y + G GD RK++ G
Sbjct: 537 LLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRG 596
Query: 537 LKKEPSYSMIEVQ 549
+ K S I+
Sbjct: 597 VAKTVGQSWIDAH 609
>gi|296089801|emb|CBI39620.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 194/529 (36%), Positives = 292/529 (55%), Gaps = 6/529 (1%)
Query: 51 GKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAI 107
G +LA + + L+ + MI+G+ H A F +M L PN + +S +
Sbjct: 41 GPSVLATTLIKSYFGKGLIGEALMIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVL 100
Query: 108 SACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS-SDALLVYGEAFEPNL 166
AC G++ L G+ +H ++K G +V N+L+ MY S DA +V+ N
Sbjct: 101 KACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNE 160
Query: 167 VSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCL 226
VS+ LIAG+ G VF+ ML + + + FSF+ + C+ G LH
Sbjct: 161 VSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAA 220
Query: 227 TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKG 286
K ESN V N+I+ +Y + + EA + F + ++DLI+WNT IA ++ +
Sbjct: 221 VTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYER-SNPTES 279
Query: 287 LSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVN 346
L VF M ++ G P+ FTF SI+AACA LA + G+QIH +IR L+ ++ + NAL++
Sbjct: 280 LYVFSMMESE-GFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALID 338
Query: 347 MYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVT 406
MY+KCG I+ S+++F M R++VSW ++ + H G A++LF++M +GI+PD V
Sbjct: 339 MYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVV 398
Query: 407 FIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
F+ +L+AC+HAGLV EG YF M Y ISPD E + C++DLLGRAGK+ EA E +
Sbjct: 399 FMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESM 458
Query: 467 PLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVA 526
P D V G L AC+ +G+ A ++ L+P YV+LSN+YA+DG WG+ A
Sbjct: 459 PFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVMLSNIYAADGKWGEFA 518
Query: 527 GARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
RK++K G KKE S +EV F V + SKI I +L+ L
Sbjct: 519 RLRKLMKRMGNKKETGRSWVEVGNHVYSFVVGDEVGSKIEGIYQVLENL 567
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 188/387 (48%), Gaps = 8/387 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCG-KMILARKVF 60
A +ISS+L C K L G +H +K G+ + V N ++++YA C M A VF
Sbjct: 93 AFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVF 152
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLV 117
+ +N VSW+ +I+G+ + L F QM L N + F+ A+ AC I S
Sbjct: 153 RGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHT 212
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+Q+HA K G+ S V NS++ MY + S+A + E + +L+++N LIAG+
Sbjct: 213 FGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGY- 271
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
E P + VF +M +G P+ F+F + C+ L G +H ++ L+ N
Sbjct: 272 ERSNPTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLA 331
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+ N ++ +YSK I ++ + F + +DL+SW + E+ + +F +M
Sbjct: 332 LSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRS- 390
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLI-RMRLNQDVGVGNALVNMYAKCGLISC 356
G+RPD F +IL+AC+ V G + ++ ++ D + +V++ + G +
Sbjct: 391 GIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEE 450
Query: 357 SYKLFNEMLHR-NVVSWNTIIAAHANH 382
+Y+L M + + W + A H
Sbjct: 451 AYELIESMPFKPDECVWGPFLGACKAH 477
>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 181/555 (32%), Positives = 310/555 (55%), Gaps = 4/555 (0%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
LHA V++ G DV ++N +LN+Y KCG++ A+ +F+ M R+++SW++++SG+ Q G
Sbjct: 168 LHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGN 227
Query: 84 HLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
L+ +M + P++ F S +SA A L G+ +H + L+ G S + S
Sbjct: 228 IREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETS 287
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
LI MY+K G + A ++ +++S+ A+I+G V+N + VF+ ML+ ++P
Sbjct: 288 LIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPS 347
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+ A L C+ G +H ++ +++ + N+++ +Y+K + ++ F
Sbjct: 348 TATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFD 407
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ +D++SWN ++ + K L +F EM RPD T S+L ACA + ++
Sbjct: 408 RMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQ-RPDSITVVSLLQACASIGALH 466
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
GK IH + + L + + ALV+MY+KCG + + K F+ M +++VSW++IIA +
Sbjct: 467 QGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYG 526
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
+H G +AL+++ TGI+P+ V ++ +L+AC+H GLV +G ++F+SM K +GI P +
Sbjct: 527 SHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRL 586
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH 500
EH C++DLL RAG++ EA + K+ VLG LL ACR +V +G+ +A+++
Sbjct: 587 EHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVI 646
Query: 501 LQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEF 560
L+P YV L++ YAS W V +K LKK P +S IE+ GT F
Sbjct: 647 LKPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHS 706
Query: 561 SHSKIGEINYMLKTL 575
SH + EI +LK L
Sbjct: 707 SHPQFEEIMLVLKIL 721
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 149/488 (30%), Positives = 260/488 (53%), Gaps = 19/488 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + SL+ C+ G+S H V+ G D ++ ++N Y+K G ARKVFD
Sbjct: 48 AHTFPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFD 107
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISA---CAGIQSLVK 118
M +RN+V W+ MI + +AGEH +A FS +++ + I S+++ +G+ LV
Sbjct: 108 TMDDRNVVPWTTMIGCYTRAGEHDVA---FSMYNIMRRQGIQPSSVTMLGLLSGVLELVH 164
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
Q +HA +++G+ S + NS++++Y K G DA ++ +++S+N+L++G+ +
Sbjct: 165 LQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQ 224
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ ++ M G+ PD+ +F + ++ + L G ++H ++ LE + +
Sbjct: 225 LGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHI 284
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIE---EKDLISWNTFIAAC--SHCADYEKGLSVFKEM 293
+++ +Y K G AFR+ E KD+ISW I+ + CAD ++VF+ M
Sbjct: 285 ETSLIGMYLK---CGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADM--AVTVFRRM 339
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
V P T AS+LAACA L S G +H +++R R+ D+ N+LV MYAKCG
Sbjct: 340 LKSR-VMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGH 398
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ S +F+ M R++VSWN I++ HA + AL LF +M+ +PDS+T + LL A
Sbjct: 399 LEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQA 458
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C G + +G+ N + K+ + P I T L+D+ + G L A++ + P QD +
Sbjct: 459 CASIGALHQGKWIHNFVTKSC-LGPCILIDTALVDMYSKCGDLGSAQKCFDRMP-QQDLV 516
Query: 474 VLGTLLSA 481
++++
Sbjct: 517 SWSSIIAG 524
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 194/393 (49%), Gaps = 8/393 (2%)
Query: 70 SWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYS 126
S++A+I+ AG L +S M P+ + F S + AC + G H
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
+ GY+S S++ SLI+ Y K G++ A V+ + N+V + +I + + + F
Sbjct: 75 IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
++ +M RQG+ P + G L S +L LH ++ S+ + N+++ +Y
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLL---SGVLELVHLQCLHACVIQYGFGSDVALANSMLNVY 191
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
K + +A+ F L++ +D+ISWN+ ++ + + + L + M D G+ PD TF
Sbjct: 192 CKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTD-GIEPDQQTF 250
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
S+++A A + + GK +H H++R L QD + +L+ MY KCG ++ ++++F M+H
Sbjct: 251 GSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMH 310
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
++V+SW +I+ + A+ +F +M + + P + T +L AC G G +
Sbjct: 311 KDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSV 370
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+ + I DI L+ + + G L ++
Sbjct: 371 HGYILRQR-IKLDIPSQNSLVTMYAKCGHLEQS 402
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 69/111 (62%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ SLL C+ AL QG +H V K + P +++ ++++Y+KCG + A+K FD M
Sbjct: 451 TVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRM 510
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQ-MH--LLPNEYIFASAISACA 111
+++LVSWS++I+G+ G+ AL +S +H + PN I+ S +SAC+
Sbjct: 511 PQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACS 561
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 184/560 (32%), Positives = 315/560 (56%), Gaps = 4/560 (0%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G+ LH +K G++ +V V+N ++++YAKC + K+F M +LV+W+ MISG Q
Sbjct: 266 GVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQ 325
Query: 81 AGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
G AL F M + P+ S + A + +G+++H Y ++ F+
Sbjct: 326 NGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFL 385
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
++L+ +Y K A VY + ++V + +I+G+V N ++ ++F+ +L QG+
Sbjct: 386 VSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGI 445
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
P+ + A L C+ ++ G LH +K E +V + +M +Y+K + +
Sbjct: 446 RPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHY 505
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F I KD ++WN+ I++ + + E+ L++F+EM + GV+ + T +S+L+ACA L
Sbjct: 506 IFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCME-GVKYSNVTISSVLSACASLP 564
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
++ +GK+IH +I+ + D+ +AL++MY KCG + ++++F M +N VSWN+IIA
Sbjct: 565 AIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIA 624
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
++ + L ++ L M+ G K D VTF+ L++AC HAG V+EG F M + Y I+
Sbjct: 625 SYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIA 684
Query: 438 PDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQ 497
P +EHF C++DL RAGKL +A E P D + G LL ACR+ R+V + E +++
Sbjct: 685 PRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQE 744
Query: 498 LFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTV 557
LF L P + YVL+SN+ A G W V+ R+++KD+ ++K P YS ++V T F
Sbjct: 745 LFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVA 804
Query: 558 AEFSHSKIGEINYMLKTLSL 577
A+ SH +I LK++ L
Sbjct: 805 ADKSHPDSEDIYMSLKSILL 824
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 229/464 (49%), Gaps = 13/464 (2%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQP-DVIVSNHVLNLYAKCGKMILARKVFD 61
+ + ++L C L G+ +H + G+ D + ++ +Y + A VF
Sbjct: 40 RRLLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFS 99
Query: 62 EM---SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL-----LPNEYIFASAISACAGI 113
+ + + W+ +I G AG++ AL F+ +M LP+ + F + +CA +
Sbjct: 100 SLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAAL 159
Query: 114 QSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALI 173
++ G+ +H + G FVG++LI MY G DA V+ E + V +N ++
Sbjct: 160 GAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMM 219
Query: 174 AGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE 233
G+V+ E+F M G P+ + A L + + +DL G+ LH L VK LE
Sbjct: 220 DGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLE 279
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
S V NT++++Y+K + + K F L+ DL++WN I+ C ++ L +F +M
Sbjct: 280 SEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDM 339
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
G+RPD T S+L A L GK++H +++R ++ DV + +ALV++Y KC
Sbjct: 340 QKS-GIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRA 398
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ + +++ +VV +T+I+ + + + A+K+F + GI+P++V +L A
Sbjct: 399 VRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPA 458
Query: 414 CNHAGLVKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
C +K G E + +++ Y +E + L+D+ + G+L
Sbjct: 459 CASMAAMKLGQELHSYALKNAYEGRCYVE--SALMDMYAKCGRL 500
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 146/284 (51%), Gaps = 11/284 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A +I+S+L C+ A++ G LH+ LK + V + ++++YAKCG++ L+ +F
Sbjct: 449 AVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFS 508
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEY---IFASAISACAGIQSLVK 118
++S ++ V+W++MIS Q GE AL F +M + +Y +S +SACA + ++
Sbjct: 509 KISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYY 568
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G++IH +K + F ++LI MY K G A V+ E N VS+N++IA +
Sbjct: 569 GKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGA 628
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPF 237
++ + + M +G D +F + C+ + +++G+ + C+T + ++
Sbjct: 629 YGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRME 688
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEE----KDLISWNTFIAAC 277
++ LYS+ G+ +KA LI + D W + AC
Sbjct: 689 HFACMVDLYSR---AGKLDKAMELIVDMPFKPDAGIWGALLHAC 729
>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
Length = 654
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 189/555 (34%), Positives = 292/555 (52%), Gaps = 53/555 (9%)
Query: 25 HAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ---A 81
HA +KM DV V + ++N+Y K G ARKVFD M ERN VSW+ MISG+ A
Sbjct: 131 HAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLA 190
Query: 82 GEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSL 141
E L + NE++F S +SA + + G+QIH ++K G SI VGN+L
Sbjct: 191 AEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNAL 250
Query: 142 ISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDR 201
++MY K G DAL + + + N ++++A+I G ++ +K ++F M G+ P
Sbjct: 251 VTMYAKCGSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSE 310
Query: 202 FSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRL 261
F+F G + CS +G +H +K ES +V ++ +Y+K + I +A K F
Sbjct: 311 FTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDY 370
Query: 262 IEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQH 321
++E D++ W + I + E LS++ M + G+ P++ T AS+L AC+ LA+++
Sbjct: 371 LQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEME-GILPNELTMASVLKACSSLAALEQ 429
Query: 322 GKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN 381
GKQIHA ++ +V +G+AL MYAKCG + +F M R+V+SWN +I+ +
Sbjct: 430 GKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQ 489
Query: 382 HRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIE 441
+ G AL+LFE+M+ G KPD VTF+ +L+AC+H GLV+ G YF M +G+ P +E
Sbjct: 490 NGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVE 549
Query: 442 HFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHL 501
H+ C++D+L RAGKL EA E+T+ +
Sbjct: 550 HYACMVDILSRAGKLKEAIEFTESATIDH------------------------------- 578
Query: 502 QPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFS 561
GMW DV R+M+K G+ KEP S IE++ F V +
Sbjct: 579 ------------------GMWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQM 620
Query: 562 HSKIGEINYMLKTLS 576
H +IG+I+ L+ LS
Sbjct: 621 HPQIGDIHVELRQLS 635
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 194/386 (50%), Gaps = 13/386 (3%)
Query: 97 LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALL 156
LP+ F +A+ +SL KG+ +HA +K +S ++ NSL+++Y K +A
Sbjct: 3 LPSNRSFFTALLQYTHNRSLQKGKALHAQIIK-SSSSCVYIANSLVNLYAKCQRLREAKF 61
Query: 157 VYGEAFEPNLVSFNALIAGFVENQQPEKG----FEVFKLMLRQGLLPDRFSFAGGLEICS 212
V+ ++VS+N +I G+ +Q G E+F+ M + P+ +FAG S
Sbjct: 62 VFERIQNKDVVSWNCIINGY--SQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAAS 119
Query: 213 VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNT 272
D G + H + +K + FVG+++M +Y K L EA K F + E++ +SW T
Sbjct: 120 TLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWAT 179
Query: 273 FIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
I+ + + L +F+ M + ++F F S+L+A V +GKQIH ++
Sbjct: 180 MISGYASQKLAAEALGLFRLMRREEE-GENEFVFTSVLSALTLPELVNNGKQIHCIAVKN 238
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
L V VGNALV MYAKCG + + + F +N ++W+ +I A ALKLF
Sbjct: 239 GLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLF 298
Query: 393 EQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
M +GI+P TF+G++ AC+ G EG+ + + K G I T L+D+ +
Sbjct: 299 SSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLK-LGFESQIYVMTALVDMYAK 357
Query: 453 AGKLLEAEEYTKKFPLGQDP-IVLGT 477
+++A K F Q+P IVL T
Sbjct: 358 CSSIVDAR---KGFDYLQEPDIVLWT 380
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 3/119 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++S+L CS AL+QG +HA +K G +V + + + +YAKCG + VF M
Sbjct: 413 TMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRM 472
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKG 119
R+++SW+AMISG Q G ALE F +M L P+ F + +SAC+ + + +G
Sbjct: 473 PARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERG 531
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 188/576 (32%), Positives = 314/576 (54%), Gaps = 12/576 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+SL+ + L+Q +HA +L +G+Q + +++ + G + AR+VFD++
Sbjct: 25 ASLIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPR 81
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQI 122
+ W+A+I G+ + AL +S M L P+ + F + AC+G+ L G+ +
Sbjct: 82 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 141
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF---EPNLVSFNALIAGFVEN 179
HA + G+ + FV N LI++Y K A V+ E E +VS+ A+++ + +N
Sbjct: 142 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVF-EGLPLPERTIVSWTAIVSAYAQN 200
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+P + E+F M + + PD + L + DL++G +H VK LE P +
Sbjct: 201 GEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLL 260
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ +Y+K + A+ F ++ +LI WN I+ + + + +F EM N V
Sbjct: 261 ISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINK-DV 319
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
RPD + S ++ACA + S++ + ++ ++ R DV + +AL++M+AKCG + +
Sbjct: 320 RPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARL 379
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F+ L R+VV W+ +I + H A+ L+ M+ G+ P+ VTF+GLL ACNH+G+
Sbjct: 380 VFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGM 439
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V+EG +FN M + I+P +H+ C+IDLLGRAG L +A E K P+ V G LL
Sbjct: 440 VREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALL 498
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
SAC+ R V +GE A+QLF + P+ T YV LSNLYA+ +W VA R +K+ GL K
Sbjct: 499 SACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNK 558
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ S +EV+G E F V + SH + EI ++ +
Sbjct: 559 DVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWI 594
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 178/348 (51%), Gaps = 22/348 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMG--IQPDVIVSNHVLNLYAKCGKMILARKVFD 61
++ S+L+ + + L+QG S+HA+V+KMG I+PD+++S + +YAKCG++ A+ +FD
Sbjct: 224 ALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS--LNTMYAKCGQVATAKILFD 281
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
+M NL+ W+AMISG+ + G A++ F +M + P+ SAISACA + SL +
Sbjct: 282 KMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQ 341
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+ ++ Y + Y F+ ++LI M+ K G A LV+ + ++V ++A+I G+
Sbjct: 342 ARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGL 401
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ + + +++ M R G+ P+ +F G L C+ S +R+G K+
Sbjct: 402 HGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQH 461
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIE----EKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
++ L + G ++A+ +I+ + + W ++AC E G +++
Sbjct: 462 YACVIDLLGR---AGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLF 518
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR---LNQDVG 339
+ + S L A A L ++ +RM+ LN+DVG
Sbjct: 519 SIDPSNTGHYVQLSNLYAAARL-----WDRVAEVRVRMKEKGLNKDVG 561
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 176/525 (33%), Positives = 300/525 (57%), Gaps = 13/525 (2%)
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLV 117
D E N+ +++A+ISG G EF+ +M ++P+++ F AI AC + +
Sbjct: 97 DPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEI- 155
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
++IH KFG F+G++L++ Y+K G A + + E ++V +NA++ G+
Sbjct: 156 --KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYA 213
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ Q E E F+ M + ++P RF+ G L + +V DL G I+H +K +S
Sbjct: 214 QIGQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVA 273
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N+++ +Y K I +A + F ++ EKD+ SWN+ ++ C D++ L + M
Sbjct: 274 VSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGA- 332
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD------VGVGNALVNMYAKC 351
G++PD T ++L AC+ LA++ HG++IH ++I L +D V + NA+++MYAKC
Sbjct: 333 GIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKC 392
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
G + ++ +F M +++V SWN +I + H G AL++F +M +KPD VTF+G+L
Sbjct: 393 GSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVL 452
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQD 471
+AC+HAG V +G + M+ Y ++P IEH+TC+ID+LGRAG+L EA E P+ +
Sbjct: 453 SACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEAN 512
Query: 472 PIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKM 531
P+V LL+ACRL + V+ E A+++F L+P YVL+SN+Y + G + +V R
Sbjct: 513 PVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHT 572
Query: 532 LKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
++ ++K P S IE++ F A+ +H + I L +L+
Sbjct: 573 MRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAXSIYAGLNSLT 617
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 181/374 (48%), Gaps = 18/374 (4%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+H + K G++ DV + + ++N Y K G M A+ F+E+ R++V W+AM++G+ Q G+
Sbjct: 158 IHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQ 217
Query: 84 HLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
+ LE F +M+ ++P+ + +S A + L G+ IH +++K GY S V NS
Sbjct: 218 FEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNS 277
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
LI MY K DAL ++ E ++ S+N++++ + + + ML G+ PD
Sbjct: 278 LIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPD 337
Query: 201 RFSFAGGLEICSVSNDLRKG------MILHCLTVKCKLESNPFVGNTIMALYSKFNLIGE 254
+ L CS L G MI+ L K + + N ++ +Y+K + +
Sbjct: 338 LVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRD 397
Query: 255 AEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA 314
A F + KD+ SWN I + L +F M ++PD+ TF +L+AC+
Sbjct: 398 AHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQ-LKPDEVTFVGVLSACS 456
Query: 315 GLASVQHGKQIHAHLIRMRLNQDVGVG----NALVNMYAKCGLISCSYKLFNEM-LHRNV 369
V G+ L++M+ DV +++M + G + +Y+L M + N
Sbjct: 457 HAGFVSQGRNF---LVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANP 513
Query: 370 VSWNTIIAAHANHR 383
V W ++AA H+
Sbjct: 514 VVWRALLAACRLHK 527
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 133/272 (48%), Gaps = 13/272 (4%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L G +H +KMG V VSN ++++Y KC + A ++F+ M E+++ SW++++S
Sbjct: 253 LNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSV 312
Query: 78 HHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
H Q G+H L +M + P+ + + AC+ + +L+ G++IH Y + G
Sbjct: 313 HEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKD 372
Query: 135 S------FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
+ N++I MY K G DA LV+ ++ S+N +I G+ + + E+
Sbjct: 373 GKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEM 432
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN--TIMALY 246
F M L PD +F G L CS + + +G + +K K + P + + ++ +
Sbjct: 433 FSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNF-LVQMKSKYDVAPTIEHYTCVIDML 491
Query: 247 SKFNLIGEA-EKAFRLIEEKDLISWNTFIAAC 277
+ + EA E A + E + + W +AAC
Sbjct: 492 GRAGQLDEAYELALTMPIEANPVVWRALLAAC 523
>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
Length = 1033
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 193/574 (33%), Positives = 315/574 (54%), Gaps = 4/574 (0%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+S L C+ + G LH +K G+ V VS+ ++++Y K GK VF+ M+
Sbjct: 154 VSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMT 213
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
RN+VSW+A+I G AG L L +FS+M + + + FA A+ A A L G+
Sbjct: 214 TRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKA 273
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
IHA ++K G+ ++V N+L +MY K + ++G+ P++VS+ LI +V+
Sbjct: 274 IHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGD 333
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
E+ + FK M + + P+ ++FA + C+ + G +H ++ L V N+
Sbjct: 334 EERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNS 393
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
I+ LYSK L+ EA F + KD+ISW+T I+ + ++ + MS + G +P
Sbjct: 394 IITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSRE-GPKP 452
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
++F AS+L+ C +A ++ GKQ+HA+ + + L+ + V +AL++MY++ G + + K+F
Sbjct: 453 NEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIF 512
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ + + ++VSW +I +A H A+ LFE + + G+ PD VTFIG+LTACNHAGLV
Sbjct: 513 DSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVD 572
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
G Y+ M Y I+P EH+ C+IDLL RAG+L EAE + P D +V TLL A
Sbjct: 573 LGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRA 632
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
CR D+ A+Q+ L P + ++ L+N+Y++ G + A RK++K G+ KEP
Sbjct: 633 CRDHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSASGRREEAAHVRKLMKSKGVIKEP 692
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+S I F SH +I +L+ L
Sbjct: 693 GWSWINSNDQLNTFVAGVQSHPLSKQITTILELL 726
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 217/435 (49%), Gaps = 14/435 (3%)
Query: 35 PDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM 94
P++ N L K GK+ AR +F++MS R+ +SW+ +I+G+ A AL FS M
Sbjct: 82 PNMPELNSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNM 141
Query: 95 H----LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGY 150
L ++++ + A+ ACA ++ G+ +H +S+K G + FV ++L+ MYMKVG
Sbjct: 142 WVDSGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGK 201
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
+ V+ N+VS+ A+I G V G F M R + D +FA L+
Sbjct: 202 TEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKA 261
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
+ S L G +H T+K +V NT+ +YSK + F + D++SW
Sbjct: 262 SAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSW 321
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
I D E+ L FK M V P+++TFAS+++ACA LA + G+QIH H +
Sbjct: 322 TNLIMTYVQMGDEERALDAFKRMRKSD-VSPNEYTFASVISACANLAITKWGEQIHGHAL 380
Query: 331 RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALK 390
R+ L + V N+++ +Y+KCGL+ + +F+ M ++++SW+TII+ + A
Sbjct: 381 RLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFN 440
Query: 391 LFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFT----CL 446
M G KP+ +L+ C L++ G+ Y + ++H T L
Sbjct: 441 YLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQV-----HAYALCIGLDHETMVHSAL 495
Query: 447 IDLLGRAGKLLEAEE 461
I + R+G L EA +
Sbjct: 496 ISMYSRSGNLQEASK 510
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 166/331 (50%), Gaps = 12/331 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S++ C+ + G +H L++G+ + VSN ++ LY+KCG + A VFD M
Sbjct: 355 TFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGM 414
Query: 64 SERNLVSWSAMISGHHQ---AGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
+ ++++SWS +IS + Q A E L + S+ PNE+ AS +S C + L G+
Sbjct: 415 TRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGK 474
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HAY+L G + V ++LISMY + G +A ++ ++VS+ A+I G+ E+
Sbjct: 475 QVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHG 534
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCL-TVKCKLESNPFVG 239
++ +F+ + GL+PD +F G L C+ + + G + L T + ++ +
Sbjct: 535 YSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHY 594
Query: 240 NTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
I+ L + + EAE R + D + W+T + AC D ++ + ++M H
Sbjct: 595 GCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQMLRLH- 653
Query: 299 VRPDD----FTFASILAACAGLASVQHGKQI 325
P+ T A+I +A H +++
Sbjct: 654 --PNSAGAHITLANIYSASGRREEAAHVRKL 682
>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 923
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 188/564 (33%), Positives = 303/564 (53%), Gaps = 6/564 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ SL+ C+ + + G +H+ + G+ V + N ++N+Y+ GK+ A +F M
Sbjct: 248 TLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNM 307
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISACAGIQSLVKG 119
S R+++SW+ MIS + Q+ + ALE Q+ PN F+SA+ AC+ ++L+ G
Sbjct: 308 SRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNG 367
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ IHA L+ ++ +GNSL++MY K D V+ ++VS N L G+
Sbjct: 368 RTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAAL 427
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRK-GMILHCLTVKCKLESNPFV 238
+ VF M G+ P+ + C DL GM LH + L S+ ++
Sbjct: 428 EDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYI 487
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N+++ +Y+ + + F I K +ISWN IAA E+ + +F + S G
Sbjct: 488 TNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMD-SQHAG 546
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ D F A L++ A LAS++ G Q+H ++ L+ D V NA ++MY KCG + C
Sbjct: 547 NKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCML 606
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
K + HR WNT+I+ +A + A F+ M + G KPD VTF+ LL+AC+HAG
Sbjct: 607 KTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAG 666
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
L+ +G Y+NSM T+G+SP I+H C++DLLGR GK EAE++ + P+ + ++ +L
Sbjct: 667 LIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSL 726
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
LS+ R +++ IG + AK L L P S YVLLSNLYA++ W DV R +K L
Sbjct: 727 LSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIKLN 786
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSH 562
K P+ S ++++ F + + SH
Sbjct: 787 KRPACSWLKLKNEVSTFGIGDRSH 810
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 219/443 (49%), Gaps = 19/443 (4%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G ++HA + G+ +V + +L+LY G ++ A+++F EM +RN+VSW+A++
Sbjct: 63 GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSS 122
Query: 81 AG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
G E L+A + ++ N A+ +S C ++ V G Q+ A+ + G + V
Sbjct: 123 NGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSV 182
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
NSLI+M+ + DA ++ E + +S+NA+I+ + + K F V M +
Sbjct: 183 ANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEV 242
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
PD + + +C+ S+ + G +H L V L + + N ++ +YS + EAE
Sbjct: 243 KPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAES 302
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
FR + +D+ISWNT I++ + L ++ P+ TF+S L AC+
Sbjct: 303 LFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPE 362
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
++ +G+ IHA +++ L + +GN+L+ MY+KC + + ++F M +VVS N +
Sbjct: 363 ALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTG 422
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN------------HAGLVKEG-- 423
+A +A+++F M+ TGIKP+ +T I L C HA + + G
Sbjct: 423 GYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLL 482
Query: 424 --EAYFNSMEKTYGISPDIEHFT 444
E NS+ Y D+E T
Sbjct: 483 SDEYITNSLITMYATCGDLESST 505
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 225/461 (48%), Gaps = 9/461 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++++++ C + G+ + A V+ G+ V V+N ++ ++ ++ A ++FD
Sbjct: 145 ANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFD 204
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
M ER+ +SW+AMIS + + S M + P+ S +S CA +
Sbjct: 205 RMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVAL 264
Query: 119 GQQIHAYSLKFG-YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G IH+ + G + S+ + N+L++MY G +A ++ +++S+N +I+ +V
Sbjct: 265 GSGIHSLCVSSGLHCSVPLI-NALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYV 323
Query: 178 ENQQPEKGFEVFKLMLRQGL-LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
++ + E +L+ P+ +F+ L CS L G +H + ++ L++
Sbjct: 324 QSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVL 383
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
+GN+++ +YSK N + + E+ F + D++S N + D + VF M
Sbjct: 384 LIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGT 443
Query: 297 HGVRPDDFTFASILAACAGLASVQ-HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
G++P+ T ++ C L + +G +HA++ + L D + N+L+ MYA CG +
Sbjct: 444 -GIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLE 502
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
S +F+ + +++V+SWN IIAA+ H G A+KLF + G K D L++
Sbjct: 503 SSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSA 562
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+ ++EG + + G+ D +D+ G+ GK+
Sbjct: 563 NLASLEEG-MQLHGLSVKNGLDCDSHVVNATMDMYGKCGKM 602
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 145/317 (45%), Gaps = 6/317 (1%)
Query: 168 SFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS---VSNDLRKGMILH 224
S+ ++G F + ++M + + F+ A + C G +H
Sbjct: 8 SWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACGAAIH 67
Query: 225 CLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYE 284
LT + L N ++G ++ LY L+ A++ F + +++++SW + A S E
Sbjct: 68 ALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCME 127
Query: 285 KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNAL 344
+ L ++ M + GV + A++++ C L G Q+ AH++ L V V N+L
Sbjct: 128 EALVAYRRMRKE-GVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSL 186
Query: 345 VNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDS 404
+ M+ + + +LF+ M R+ +SWN +I+ +++ + + M+ +KPD
Sbjct: 187 ITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDV 246
Query: 405 VTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTK 464
T L++ C + LV G +S+ + G+ + L+++ AGKL EAE +
Sbjct: 247 TTLCSLVSVCASSDLVALGSG-IHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFR 305
Query: 465 KFPLGQDPIVLGTLLSA 481
+D I T++S+
Sbjct: 306 NMS-RRDVISWNTMISS 321
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M HR SW T ++ A L +A L M+ + L+TAC H G +EG
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGW-QEG 59
Query: 424 E---AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
A +++ G+ ++ T L+ L G G +L A+ + P
Sbjct: 60 AACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMP 106
>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Brachypodium distachyon]
Length = 707
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 187/586 (31%), Positives = 311/586 (53%), Gaps = 14/586 (2%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
K I+ +L + + A+ G LH A+LK+G D ++ N+++++YAKCG++ +A +VF
Sbjct: 5 KMIADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGG 64
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISACAGIQSLVK 118
M ERN+VSW+A++ G + G+ L M L PNE+ ++++ AC + +
Sbjct: 65 MPERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAA 124
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G IH ++ G+ V NSL+ +Y K G DA V+ NLV++NA+I+G+
Sbjct: 125 GVWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAH 184
Query: 179 NQQPEKGFEVFKLMLR-----QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV--KCK 231
VF+ M + + PD F+FA L+ C R+G +H V
Sbjct: 185 AGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVS 244
Query: 232 LESNPFVGNTIMALYSKFN-LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVF 290
SN + ++ +Y K L+ A + F +E+K+ I W T I + ++ + +F
Sbjct: 245 TASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELF 304
Query: 291 KEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
+ GVR D +S++ A A V+ G+Q+H + ++ DV V N+L++MY K
Sbjct: 305 GRFWSS-GVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHK 363
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGL 410
CGL + + F E+ RNVVSW +I H G A+ +FE+M+A G++PD V ++ L
Sbjct: 364 CGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLAL 423
Query: 411 LTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQ 470
L+AC+H+GLV+E YF+++ + P EH+ C++DLLGRAG+L EA++ P+
Sbjct: 424 LSACSHSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAP 483
Query: 471 DPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARK 530
V TLLSACR+ ++V +G + L + YV+LSN++A G W + R
Sbjct: 484 TVGVWQTLLSACRVHKNVTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVRG 543
Query: 531 MLKDSGLKKEPSYSMIEVQGTFEKF-TVAEFSHSKIGEINYMLKTL 575
++ GL+K+ S +EV F + SH + +I +L+ +
Sbjct: 544 AMRRRGLRKQGGCSWVEVGKEAHFFYGGGDDSHPRAADICCVLRDV 589
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 184/560 (32%), Positives = 315/560 (56%), Gaps = 4/560 (0%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G+ LH +K G++ +V V+N ++++YAKC + K+F M +LV+W+ MISG Q
Sbjct: 266 GVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQ 325
Query: 81 AGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
G AL F M + P+ S + A + +G+++H Y ++ F+
Sbjct: 326 NGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFL 385
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
++L+ +Y K A VY + ++V + +I+G+V N ++ ++F+ +L QG+
Sbjct: 386 VSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGI 445
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
P+ + A L C+ ++ G LH +K E +V + +M +Y+K + +
Sbjct: 446 RPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHY 505
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F I KD ++WN+ I++ + + E+ L++F+EM + GV+ + T +S+L+ACA L
Sbjct: 506 IFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCME-GVKYSNVTISSVLSACASLP 564
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
++ +GK+IH +I+ + D+ +AL++MY KCG + ++++F M +N VSWN+IIA
Sbjct: 565 AIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIA 624
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
++ + L ++ L M+ G K D VTF+ L++AC HAG V+EG F M + Y I+
Sbjct: 625 SYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIA 684
Query: 438 PDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQ 497
P +EHF C++DL RAGKL +A E P D + G LL ACR+ R+V + E +++
Sbjct: 685 PRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQE 744
Query: 498 LFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTV 557
LF L P + YVL+SN+ A G W V+ R+++KD+ ++K P YS ++V T F
Sbjct: 745 LFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVA 804
Query: 558 AEFSHSKIGEINYMLKTLSL 577
A+ SH +I LK++ L
Sbjct: 805 ADKSHPDSEDIYMSLKSILL 824
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 229/464 (49%), Gaps = 13/464 (2%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQP-DVIVSNHVLNLYAKCGKMILARKVFD 61
+ + ++L C L G+ +H + G+ D + ++ +Y + A VF
Sbjct: 40 RRLLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFS 99
Query: 62 EM---SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL-----LPNEYIFASAISACAGI 113
+ + + W+ +I G AG++ AL F+ +M LP+ + F + +CA +
Sbjct: 100 SLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAAL 159
Query: 114 QSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALI 173
++ G+ +H + G FVG++LI MY G DA V+ E + V +N ++
Sbjct: 160 GAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMM 219
Query: 174 AGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE 233
G+V+ E+F M G P+ + A L + + +DL G+ LH L VK LE
Sbjct: 220 DGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLE 279
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
S V NT++++Y+K + + K F L+ DL++WN I+ C ++ L +F +M
Sbjct: 280 SEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDM 339
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
G+RPD T S+L A L GK++H +++R ++ DV + +ALV++Y KC
Sbjct: 340 QKS-GIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRA 398
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ + +++ +VV +T+I+ + + + A+K+F + GI+P++V +L A
Sbjct: 399 VRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPA 458
Query: 414 CNHAGLVKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
C +K G E + +++ Y +E + L+D+ + G+L
Sbjct: 459 CASMAAMKLGQELHSYALKNAYEGRCYVE--SALMDMYAKCGRL 500
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 146/284 (51%), Gaps = 11/284 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A +I+S+L C+ A++ G LH+ LK + V + ++++YAKCG++ L+ +F
Sbjct: 449 AVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFS 508
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEY---IFASAISACAGIQSLVK 118
++S ++ V+W++MIS Q GE AL F +M + +Y +S +SACA + ++
Sbjct: 509 KISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYY 568
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G++IH +K + F ++LI MY K G A V+ E N VS+N++IA +
Sbjct: 569 GKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGA 628
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPF 237
++ + + M +G D +F + C+ + +++G+ + C+T + ++
Sbjct: 629 YGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRME 688
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEE----KDLISWNTFIAAC 277
++ LYS+ G+ +KA LI + D W + AC
Sbjct: 689 HFACMVDLYSR---AGKLDKAMELIVDMPFKPDAGIWGALLHAC 729
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 189/574 (32%), Positives = 308/574 (53%), Gaps = 5/574 (0%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++ S+L C + + G +H LK G DV V+ +++LY++ + AR +FDE
Sbjct: 154 RTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDE 210
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQI 122
M R++ SW+AMISG+ Q+G AL + + + + S +SAC +G I
Sbjct: 211 MPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM-DSVTVVSLLSACTEAGDFNRGVTI 269
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H+YS+K G S FV N LI +Y + G D V+ + +L+S+N++I + N+QP
Sbjct: 270 HSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQP 329
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV-KCKLESNPFVGNT 241
+ +F+ M + PD + I S D+R + T+ K + +GN
Sbjct: 330 LRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNA 389
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y+K L+ A F + D+ISWNT I+ + + + ++ M + +
Sbjct: 390 VVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAA 449
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
+ T+ S+L AC+ +++ G ++H L++ L DV V +L +MY KCG + + LF
Sbjct: 450 NQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLF 509
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
++ N V WNT+IA H H G A+ LF++M G+KPD +TF+ LL+AC+H+GLV
Sbjct: 510 YQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVD 569
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
EG+ F M+ YGI+P ++H+ C++D+ GRAG+L A ++ K L D + G LLSA
Sbjct: 570 EGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 629
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
CR+ +V +G+ ++ LF ++P +VLLSN+YAS G W V R + GL+K P
Sbjct: 630 CRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTP 689
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+S +EV E F +H E+ L L
Sbjct: 690 GWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTAL 723
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 136/471 (28%), Positives = 248/471 (52%), Gaps = 20/471 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +L +C+ LQ LHA ++ +V +S ++NLY G + LAR FD +
Sbjct: 56 DVHTLFRYCTN---LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHI 112
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFS----QMHLLPNEYIFASAISACAGIQSLVKG 119
R++ +W+ MISG+ +AG + FS L P+ F S + AC ++++ G
Sbjct: 113 QNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDG 169
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+IH +LKFG+ +V SLI +Y + +A +++ E ++ S+NA+I+G+ ++
Sbjct: 170 NKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQS 229
Query: 180 QQPEKGFEVFKLMLRQGLLP-DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
++ L L GL D + L C+ + D +G+ +H ++K LES FV
Sbjct: 230 GNAKEA-----LTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFV 284
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N ++ LY++F + + +K F + +DLISWN+ I A + +S+F+EM
Sbjct: 285 SNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSR- 343
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKCGLISCS 357
++PD T S+ + + L ++ + + +R +D+ +GNA+V MYAK GL+ +
Sbjct: 344 IQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSA 403
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG-IKPDSVTFIGLLTACNH 416
+FN + + +V+SWNTII+ +A + A++++ M+ G I + T++ +L AC+
Sbjct: 404 RAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQ 463
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
AG +++G + K G+ D+ T L D+ G+ G+L +A + P
Sbjct: 464 AGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP 513
>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 993
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 188/564 (33%), Positives = 303/564 (53%), Gaps = 6/564 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ SL+ C+ + + G +H+ + G+ V + N ++N+Y+ GK+ A +F M
Sbjct: 248 TLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNM 307
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISACAGIQSLVKG 119
S R+++SW+ MIS + Q+ + ALE Q+ PN F+SA+ AC+ ++L+ G
Sbjct: 308 SRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNG 367
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ IHA L+ ++ +GNSL++MY K D V+ ++VS N L G+
Sbjct: 368 RTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAAL 427
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRK-GMILHCLTVKCKLESNPFV 238
+ VF M G+ P+ + C DL GM LH + L S+ ++
Sbjct: 428 EDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYI 487
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N+++ +Y+ + + F I K +ISWN IAA E+ + +F + S G
Sbjct: 488 TNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMD-SQHAG 546
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ D F A L++ A LAS++ G Q+H ++ L+ D V NA ++MY KCG + C
Sbjct: 547 NKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCML 606
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
K + HR WNT+I+ +A + A F+ M + G KPD VTF+ LL+AC+HAG
Sbjct: 607 KTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAG 666
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
L+ +G Y+NSM T+G+SP I+H C++DLLGR GK EAE++ + P+ + ++ +L
Sbjct: 667 LIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSL 726
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
LS+ R +++ IG + AK L L P S YVLLSNLYA++ W DV R +K L
Sbjct: 727 LSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIKLN 786
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSH 562
K P+ S ++++ F + + SH
Sbjct: 787 KRPACSWLKLKNEVSTFGIGDRSH 810
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 219/443 (49%), Gaps = 19/443 (4%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G ++HA + G+ +V + +L+LY G ++ A+++F EM +RN+VSW+A++
Sbjct: 63 GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSS 122
Query: 81 AG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
G E L+A + ++ N A+ +S C ++ V G Q+ A+ + G + V
Sbjct: 123 NGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSV 182
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
NSLI+M+ + DA ++ E + +S+NA+I+ + + K F V M +
Sbjct: 183 ANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEV 242
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
PD + + +C+ S+ + G +H L V L + + N ++ +YS + EAE
Sbjct: 243 KPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAES 302
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
FR + +D+ISWNT I++ + L ++ P+ TF+S L AC+
Sbjct: 303 LFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPE 362
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
++ +G+ IHA +++ L + +GN+L+ MY+KC + + ++F M +VVS N +
Sbjct: 363 ALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTG 422
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN------------HAGLVKEG-- 423
+A +A+++F M+ TGIKP+ +T I L C HA + + G
Sbjct: 423 GYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLL 482
Query: 424 --EAYFNSMEKTYGISPDIEHFT 444
E NS+ Y D+E T
Sbjct: 483 SDEYITNSLITMYATCGDLESST 505
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 225/461 (48%), Gaps = 9/461 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++++++ C + G+ + A V+ G+ V V+N ++ ++ ++ A ++FD
Sbjct: 145 ANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFD 204
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
M ER+ +SW+AMIS + + S M + P+ S +S CA +
Sbjct: 205 RMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVAL 264
Query: 119 GQQIHAYSLKFG-YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G IH+ + G + S+ + N+L++MY G +A ++ +++S+N +I+ +V
Sbjct: 265 GSGIHSLCVSSGLHCSVPLI-NALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYV 323
Query: 178 ENQQPEKGFEVFKLMLRQGL-LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
++ + E +L+ P+ +F+ L CS L G +H + ++ L++
Sbjct: 324 QSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVL 383
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
+GN+++ +YSK N + + E+ F + D++S N + D + VF M
Sbjct: 384 LIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGT 443
Query: 297 HGVRPDDFTFASILAACAGLASVQ-HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
G++P+ T ++ C L + +G +HA++ + L D + N+L+ MYA CG +
Sbjct: 444 -GIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLE 502
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
S +F+ + +++V+SWN IIAA+ H G A+KLF + G K D L++
Sbjct: 503 SSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSA 562
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+ ++EG + + G+ D +D+ G+ GK+
Sbjct: 563 NLASLEEG-MQLHGLSVKNGLDCDSHVVNATMDMYGKCGKM 602
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 145/317 (45%), Gaps = 6/317 (1%)
Query: 168 SFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS---VSNDLRKGMILH 224
S+ ++G F + ++M + + F+ A + C G +H
Sbjct: 8 SWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACGAAIH 67
Query: 225 CLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYE 284
LT + L N ++G ++ LY L+ A++ F + +++++SW + A S E
Sbjct: 68 ALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCME 127
Query: 285 KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNAL 344
+ L ++ M + GV + A++++ C L G Q+ AH++ L V V N+L
Sbjct: 128 EALVAYRRMRKE-GVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSL 186
Query: 345 VNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDS 404
+ M+ + + +LF+ M R+ +SWN +I+ +++ + + M+ +KPD
Sbjct: 187 ITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDV 246
Query: 405 VTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTK 464
T L++ C + LV G +S+ + G+ + L+++ AGKL EAE +
Sbjct: 247 TTLCSLVSVCASSDLVALGSG-IHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFR 305
Query: 465 KFPLGQDPIVLGTLLSA 481
+D I T++S+
Sbjct: 306 NMSR-RDVISWNTMISS 321
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M HR SW T ++ A L +A L M+ + L+TAC H G +EG
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGW-QEG 59
Query: 424 E---AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
A +++ G+ ++ T L+ L G G +L A+ + P
Sbjct: 60 AACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMP 106
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 193/613 (31%), Positives = 319/613 (52%), Gaps = 47/613 (7%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYA--KCGKMILARKVFDEMS 64
SL+ CS+TK L+Q +HA +L+ G+ D ++ ++ A + A++VFD++
Sbjct: 40 SLIDQCSETKQLKQ---IHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIP 96
Query: 65 ERNLVSWSAMISGH-HQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
NL +W+ +I + + H L F +H P+++ F I A + ++ L G+
Sbjct: 97 HPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGK 156
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
H +K S F+ NSLI Y K G V+ ++VS+N++I FV+
Sbjct: 157 AFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGG 216
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
PE+ E+F+ M Q + P+ + G L C+ +D G +H + ++ + + N
Sbjct: 217 CPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSN 276
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISW------------------------------ 270
++ +Y+K + +A++ F + EKD++SW
Sbjct: 277 AMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAA 336
Query: 271 -NTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
N I+A C ++ L +F E+ +PD+ T S L+ACA L ++ G IH ++
Sbjct: 337 WNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYI 396
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
+ + + + +L++MY KCG + + +F+ + ++V W+ +IA A H G A+
Sbjct: 397 KKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAI 456
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
LF +M+ +KP++VTF +L AC+H GLV+EG +FN ME YG+ P ++H+ C++D+
Sbjct: 457 ALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDI 516
Query: 450 LGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPY 509
LGRAG L EA E +K P+ V G LL AC + +VV+ E+ QL L+P Y
Sbjct: 517 LGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAY 576
Query: 510 VLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSH------- 562
VLLSN+YA G W V+G RK+++D GLKKEP S IEV G +F V + SH
Sbjct: 577 VLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIY 636
Query: 563 SKIGEINYMLKTL 575
+K+ EI L+T+
Sbjct: 637 AKLDEIVARLETI 649
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S L C++ A+ G +H + K G++ + ++ ++++Y KCG + A VF +
Sbjct: 372 TLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSV 431
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+++ WSAMI+G G A+ FS+M + PN F + + AC+ + + +G+
Sbjct: 432 ERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGR 491
>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 662
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 194/576 (33%), Positives = 323/576 (56%), Gaps = 11/576 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+SL+ C+ K+L SLH +LK G + +++ Y KC + ARK+FDEM
Sbjct: 5 TSLIAQCTNKKSLTTLKSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMPN 63
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQI 122
R++V+W++MIS H G+ A+E +S M +LP+ Y F++ A + + +GQ+
Sbjct: 64 RHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKA 123
Query: 123 HAYSLKFGY-ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
H ++ G+ S FV ++ MY K G DA V+ + ++V F ALI G+ ++
Sbjct: 124 HGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGL 183
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ EVF+ M+ + P+ ++ A L C DL G ++H L VK LES +
Sbjct: 184 DGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTS 243
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +YSK N++ ++ K F + ++W +FI E LS+F+EM + P
Sbjct: 244 LLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMR-CSISP 302
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
+ FT +SIL AC+ LA ++ G+QIHA +++ ++ + V AL+++Y KCG + + +F
Sbjct: 303 NHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVF 362
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ + ++VS NT+I A+A + G AL+LFE++K G++P+ VTFI +L ACN+AGLV+
Sbjct: 363 DSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVE 422
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG--TLL 479
EG F+ + + I +H+TC+IDLLGRA + EE T G++P V+ TLL
Sbjct: 423 EGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRF---EEATMLIEEGKNPDVIQWRTLL 479
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
+AC++ +V + E+ K++ P ++LL+N+YAS G W +V + +D LKK
Sbjct: 480 NACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKK 539
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P+ S +++ F + SH + EI+ ML L
Sbjct: 540 TPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHEL 575
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 146/299 (48%), Gaps = 14/299 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++S+L C L G +H V+K G++ V +L +Y+KC + + KVF+ +
Sbjct: 205 TLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSL 264
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ + V+W++ I G Q G +AL F +M + PN + +S + AC+ + L G+
Sbjct: 265 AYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGE 324
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIHA ++K G FV +LI +Y K G A V+ E ++VS N +I + +N
Sbjct: 325 QIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNG 384
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ E+F+ + + GL P+ +F L C+ + + +G + L + +N +
Sbjct: 385 FGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSL-----IRNNHSIEL 439
Query: 241 TIMALYSKFNLIGEA---EKAFRLIEE---KDLISWNTFIAACSHCADYEKGLSVFKEM 293
T +L+G A E+A LIEE D+I W T + AC + E K+M
Sbjct: 440 TRDHYTCMIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKM 498
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 112/233 (48%), Gaps = 20/233 (8%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+LH CS L+ G +HA +K+G+ + V +++LY KCG + AR VFD +
Sbjct: 306 TLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSL 365
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
+E ++VS + MI + Q G ALE F ++ L PN F S + AC + +G
Sbjct: 366 TELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGC 425
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYS---SDALLVYGEAFEPNLVSFNALIAGFV 177
QI +SL SI + M +G + +A ++ E P+++ + L+
Sbjct: 426 QI--FSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLLNACK 483
Query: 178 ENQQPEKGFEVFKLMLRQG--------LLPDRFSFAGG----LEICSVSNDLR 218
+ + E + K ML Q LL + ++ AG +E+ S DLR
Sbjct: 484 IHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLR 536
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 96/181 (53%), Gaps = 16/181 (8%)
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
+ S++A C S+ K +H H+++ + G+ L++ Y KC +I+ + KLF+EM
Sbjct: 4 YTSLIAQCTNKKSLTTLKSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMP 62
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
+R++V+WN++I++H + A++L+ M G+ PD+ TF + A + G+ +EG
Sbjct: 63 NRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREG-- 120
Query: 426 YFNSMEKTYGIS-------PDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
+K +G++ D T ++D+ + GK+ +A + L +D ++ L
Sbjct: 121 -----QKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDA-RFVFDRVLDKDVVLFTAL 174
Query: 479 L 479
+
Sbjct: 175 I 175
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 297/545 (54%), Gaps = 5/545 (0%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM- 94
+V V +LN+Y K G + AR++FD M +RN SWS M++G+ A + F M
Sbjct: 152 NVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLML 211
Query: 95 HLLPNE---YIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
P+E ++ + +SA + L+ G+Q+H +K G V NSL++MY K G
Sbjct: 212 EECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCM 271
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
A V+ + E N ++++A+I G+ +N + + +F M G P F+F G L
Sbjct: 272 GAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNAS 331
Query: 212 SVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
S L G H L VK E +V + ++ +Y+K I +A++ F + E D++ W
Sbjct: 332 SDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWT 391
Query: 272 TFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
++ ++E+ L+++ M + G+ P T AS L ACAG+A+++ GKQ+H +++
Sbjct: 392 AMVSGHVQNGEHEEALTLYARMDKE-GIIPSKSTIASGLRACAGIAALEPGKQLHTQIVK 450
Query: 332 MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
L VG+AL MY+KCG + +F + R+V++WN+II+ + + G AL L
Sbjct: 451 YGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDL 510
Query: 392 FEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLG 451
FE+MK G PD++TFI +L AC+H GLV G YF+ M K YG++P ++H+ C++D+L
Sbjct: 511 FEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILS 570
Query: 452 RAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVL 511
RAG L EA+++ + + + +L ACR RD +G ++L L +S Y+L
Sbjct: 571 RAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTRDSSAYIL 630
Query: 512 LSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYM 571
LSN+YAS W DV R +++ G+ K+P S +E+ F V E H + IN
Sbjct: 631 LSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQ 690
Query: 572 LKTLS 576
L+ L+
Sbjct: 691 LRRLA 695
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 134/476 (28%), Positives = 236/476 (49%), Gaps = 22/476 (4%)
Query: 19 QQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILAR--KVFDEM--SERNLVSWSAM 74
+ G +LHA LK G V+N ++N Y+ + +LA VFD++ + R++ SW+++
Sbjct: 29 RHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSL 88
Query: 75 IS--GHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
++ H+ L AL F M +LP+ + FA+A +A A S G HA + K
Sbjct: 89 LNPLSRHRP---LDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACK 145
Query: 129 FGYA-SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE 187
A S +V SL++MY K+G SDA ++ + N S++ ++AG+ + E+ F+
Sbjct: 146 IPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFD 205
Query: 188 VFKLMLRQGLLP---DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
+F+LML + P F L SV L G +H L VK L V N+++
Sbjct: 206 LFRLMLEE--CPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVT 263
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y+K +G A F E++ I+W+ I + + + +S+F +M + G P +F
Sbjct: 264 MYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQM-HAAGFTPTEF 322
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
TF +L A + L ++ GKQ H ++++ + V +ALV+MYAKCG I+ + + F+++
Sbjct: 323 TFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQL 382
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
++V W +++ H + AL L+ +M GI P T L AC ++ G+
Sbjct: 383 YEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGK 442
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+ K YG+ + L + + G L + ++ P +D I +++S
Sbjct: 443 QLHTQIVK-YGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIP-DRDVIAWNSIIS 496
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 202/610 (33%), Positives = 322/610 (52%), Gaps = 43/610 (7%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKC--GKMILARKVFDEMS 64
+LL +C + L+Q +H+ ++K G+ + ++ A G + A +F +
Sbjct: 33 TLLSNCKTLQTLKQ---IHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIR 89
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
N V W+ MI G + LALE++ M PNEY F S +C I+ +G+Q
Sbjct: 90 NPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQ 149
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG---------------------- 159
+HA+ LK G +FV SLI+MY + G +A LV+
Sbjct: 150 VHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGF 209
Query: 160 -----EAFEP----NLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
E F+ ++VS+NA+I+G+ ++ + E+ F+ M R + P+ + L
Sbjct: 210 LDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSA 269
Query: 211 CSVS-NDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
C+ S + L+ G + L SN + N ++ +Y K + EA F I++K+++S
Sbjct: 270 CAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVS 329
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
WN I +H + Y++ L +F+ M + + P+D TF SIL ACA L ++ GK +HA++
Sbjct: 330 WNVMIGGYTHMSCYKEALGLFRRMMQSN-IDPNDVTFLSILPACANLGALDLGKWVHAYV 388
Query: 330 IR--MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGS 387
+ + V + +L++MYAKCG ++ + ++F+ M +++ +WN +I+ A H +
Sbjct: 389 DKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDT 448
Query: 388 ALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLI 447
AL LF +M + G PD +TF+G+LTAC HAGL+ G YF+SM + Y +SP + H+ C+I
Sbjct: 449 ALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMI 508
Query: 448 DLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTS 507
DL GRAG EAE K + D + +LL ACR+ R + + E +AK LF L+P S
Sbjct: 509 DLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPS 568
Query: 508 PYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGE 567
YVLLSN+YA G W DVA R L D+ +KK P S IEV +F V + H + E
Sbjct: 569 AYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNE 628
Query: 568 INYMLKTLSL 577
I ML + +
Sbjct: 629 IYKMLDEIDM 638
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 186/559 (33%), Positives = 315/559 (56%), Gaps = 4/559 (0%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
LH+ ++K+G + V ++N Y+ CG + AR VF+ + +++V W+ ++S + + G
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGC 227
Query: 84 HLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
+L+ S+M + +PN Y F +A+ A G+ + + +H LK Y VG
Sbjct: 228 FEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVG 287
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
L+ +Y ++G SDA V+ E + ++V ++ +IA F +N K ++F M ++P+
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPN 347
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
F+ + L C++ G LH L VK + + +V N ++ +Y+K + A K F
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFA 407
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ K+++SWNT I + + K L++F+E + V + TF+S L ACA LAS++
Sbjct: 408 ELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQ-VSVTEVTFSSALGACASLASME 466
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G Q+H I+ + V V N+L++MYAKCG I + +FNEM +V SWN +I+ ++
Sbjct: 467 LGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYS 526
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
H LG AL++F+ MK + KP+ +TF+G+L+ C++AGL+ +G+ F SM +GI P +
Sbjct: 527 THGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCL 586
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH 500
EH+TC++ L GR+G+L +A + P ++ +LSA + + R A+++
Sbjct: 587 EHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEILK 646
Query: 501 LQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEF 560
+ P + YVLLSN+YA W +VA RK +K+ G+KKEP S IE QG F+V
Sbjct: 647 INPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLSWIEHQGDVHFFSVGSS 706
Query: 561 SHSKIGEINYMLKTLSLAA 579
H + IN ML+ L++ A
Sbjct: 707 DHPDMKLINGMLEWLNMKA 725
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 195/408 (47%), Gaps = 2/408 (0%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
++L C + ++H +LK G D+ +N +LN Y K G A +FDEM ER
Sbjct: 54 TMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPER 113
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYS 126
N VS+ + G+ L + H L N ++F S + + +H+
Sbjct: 114 NNVSYVTLTQGYACQDPVGLYSRLHREGHEL-NPHVFTSFLKLFVSLDKAEICWWLHSPI 172
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
+K GY S +FVG +LI+ Y G A V+ ++V + +++ +VEN E
Sbjct: 173 VKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSL 232
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
++ M G +P+ ++F L+ +H +K E +P VG ++ LY
Sbjct: 233 QLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLY 292
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
++ + +A K F + + D++ W+ IA K + +F M V P++FT
Sbjct: 293 TQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGF-VVPNEFTL 351
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
+SIL CA G+Q+H ++++ + DV V NAL+++YAKC + + KLF E+
Sbjct: 352 SSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSS 411
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+NVVSWNT+I + N GG AL +F + + VTF L AC
Sbjct: 412 KNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGAC 459
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 144/281 (51%), Gaps = 11/281 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+L+ C+ K G LH V+K+G DV VSN ++++YAKC KM A K+F E+
Sbjct: 350 TLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAEL 409
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
S +N+VSW+ +I G+ GE AL F + + E F+SA+ ACA + S+ G
Sbjct: 410 SSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGV 469
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H ++K A V NSLI MY K G A V+ E ++ S+NALI+G+ +
Sbjct: 470 QVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHG 529
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCL-TVKCKLESNPFVG 239
+ +F +M P+ +F G L CS + + +G C ++ C P +
Sbjct: 530 LGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQ--DCFESMICDHGIEPCLE 587
Query: 240 NTIMALYSKFNLIGEAEKAFRLIE----EKDLISWNTFIAA 276
+ + F G+ +KA LIE E ++ W ++A
Sbjct: 588 H-YTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSA 627
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 167/382 (43%), Gaps = 10/382 (2%)
Query: 99 NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY 158
+ + + + + C V + IH LK G F N L++ Y+K G+ DAL ++
Sbjct: 48 DSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 159 GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLR 218
E E N VS+ L G+ Q P ++ + R+G + F L++ +
Sbjct: 108 DEMPERNNVSYVTLTQGYA-CQDP---VGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
LH VK +SN FVG ++ YS + A F I KD++ W ++
Sbjct: 164 ICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYV 223
Query: 279 HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
+E L + M D G P+++TF + L A GL + K +H +++ D
Sbjct: 224 ENGCFEDSLQLLSRMGMD-GFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDP 282
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
VG L+ +Y + G +S ++K+FNEM +VV W+ +IA + A+ +F +M+
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREG 342
Query: 399 GIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLE 458
+ P+ T +L C GE + K G D+ LID+ + K+
Sbjct: 343 FVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKV-GFDLDVYVSNALIDVYAKCEKMDT 401
Query: 459 A----EEYTKKFPLGQDPIVLG 476
A E + K + + +++G
Sbjct: 402 AVKLFAELSSKNVVSWNTVIVG 423
>gi|296085749|emb|CBI29560.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 206/606 (33%), Positives = 314/606 (51%), Gaps = 67/606 (11%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARK--------- 58
LL C + L G SLH+ +K I P SNH + LY+KCG++ ARK
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 59 ----------------------VFDEMSERNLVSWSAMISGHHQAGEHLLALEFFS---Q 93
+FD++ E +LVS++ +IS + GE AL FS +
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133
Query: 94 MHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSD 153
M L + + ++ I+AC L+ Q+H+ ++ G+ S V N+L++ Y K G D
Sbjct: 134 MGLDMDGFTLSAVITACCDDVGLIG--QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDD 191
Query: 154 ALLV-YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
A V YG + VS+N++I + ++Q+ K +F+ M+R+GL D F+ A L +
Sbjct: 192 AKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFT 251
Query: 213 VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL-IGEAEKAFRLIEEKDLISWN 271
DL G+ H +K N VG+ ++ LYSK + + K F I E DL+ WN
Sbjct: 252 CLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWN 311
Query: 272 TFIAACSHCADY-EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
T ++ S ++ E L F++M G RP+D +F +++AC+ L+S GKQIH+ +
Sbjct: 312 TMVSGYSQNEEFLEDALECFRQMQGI-GYRPNDCSFVCVISACSNLSSPSQGKQIHSLAL 370
Query: 331 RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALK 390
+ +LF+ M N VS N++IA +A H + +L
Sbjct: 371 K---------------------------RLFDRMAEHNTVSLNSMIAGYAQHGIEMESLH 403
Query: 391 LFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLL 450
LF+ M I P S+TFI +L+AC H G V+EG YFN M++ + I P+ EH++C+IDLL
Sbjct: 404 LFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLL 463
Query: 451 GRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYV 510
GRAGKL EAE + P I +LL ACR ++ + + A Q+ L+P+ +PYV
Sbjct: 464 GRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYV 523
Query: 511 LLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINY 570
+LSN+YAS G W +VA RK ++D G+KK+P S IEV+ F + SH I EI
Sbjct: 524 VLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYE 583
Query: 571 MLKTLS 576
L+ +S
Sbjct: 584 FLEEMS 589
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 168/358 (46%), Gaps = 41/358 (11%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
F + C + L G+ +H+ +K ++ N I +Y K G + A + +
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 163 EPNLVSFNALIAGFVENQQP-------------------------------EKGFEVFKL 191
+PN+ SFNA+IA + + +P +F
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMI--LHCLTVKCKLESNPFVGNTIMALYSKF 249
M GL D F+ + + C +D+ G+I LH + V +S V N ++ Y K
Sbjct: 131 MREMGLDMDGFTLSAVITAC--CDDV--GLIGQLHSVAVSSGFDSYVSVNNALLTYYGKN 186
Query: 250 NLIGEAEKAFRLIEE-KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
+ +A++ F + +D +SWN+ I A + K L +F+EM G+ D FT AS
Sbjct: 187 GDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVR-RGLNVDMFTLAS 245
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC-GLISCSYKLFNEMLHR 367
+L A L + G Q H LI+ +Q+ VG+ L+++Y+KC G +S K+F E+
Sbjct: 246 VLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEP 305
Query: 368 NVVSWNTIIAAHA-NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
++V WNT+++ ++ N AL+ F QM+ G +P+ +F+ +++AC++ +G+
Sbjct: 306 DLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGK 363
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 134/281 (47%), Gaps = 34/281 (12%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKC-GKMILARKVFDE 62
+++S+L + + L G+ H ++K G + V + +++LY+KC G M RKVF+E
Sbjct: 242 TLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEE 301
Query: 63 MSERNLVSWSAMISGHHQAGEHLL-ALEFFSQMHLL---PNEYIFASAISACAGIQSLVK 118
++E +LV W+ M+SG+ Q E L ALE F QM + PN+ F ISAC+ + S +
Sbjct: 302 ITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQ 361
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+QIH+ +LK ++ E N VS N++IAG+ +
Sbjct: 362 GKQIHSLALK---------------------------RLFDRMAEHNTVSLNSMIAGYAQ 394
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPF 237
+ + +F+ ML + + P +F L C+ + + +G + + K +E
Sbjct: 395 HGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAE 454
Query: 238 VGNTIMALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAAC 277
+ ++ L + + EAE R+ I W + + AC
Sbjct: 455 HYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGAC 495
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 7/139 (5%)
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
F +L C + GK +H+ I+ + N + +Y+KCG ++ + K F ++
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
NV S+N IIAA+A A +LF+Q+ +PD V++ L++A G
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIP----EPDLVSYNTLISAYADCGETAPALG 126
Query: 426 YFNSMEKTYGISPDIEHFT 444
F+ M + + D++ FT
Sbjct: 127 LFSGMRE---MGLDMDGFT 142
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 196/576 (34%), Positives = 324/576 (56%), Gaps = 21/576 (3%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C+K ++Q ++H+ V + G++ ++VS + + YA+ G + A++VFD +ER++VSW
Sbjct: 238 CAK---IRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSW 294
Query: 72 SAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
+AM+ + Q G A F++M + P++ +A + C+ SL G+ IHA +L+
Sbjct: 295 NAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCS---SLRFGRMIHACALE 351
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
G +GN+L+ MY + G +A ++ E N VS+N +IAG + Q ++ E+
Sbjct: 352 KGLDRDIVLGNALLDMYTRCGSPEEARHLF-EGIPGNAVSWNTMIAGSSQKGQMKRALEL 410
Query: 189 FKLMLRQGLLPDRFSFAGGLE-ICSVSNDLR---KGMILHCLTVKCKLESNPFVGNTIMA 244
F+ M +G+ P R ++ LE + S + R +G LH V C S P +G ++
Sbjct: 411 FQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVK 470
Query: 245 LYSKFNLIGEAEKAFR---LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+Y+ I EA +F+ + + D++SWN I++ S ++ L F+ M + HGV P
Sbjct: 471 MYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRM-DLHGVAP 529
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
+ T ++L ACAG A++ G +H HL + +V V AL +MY +CG + + ++F
Sbjct: 530 NQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIF 589
Query: 362 NEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
++ + R+VV +N +IAA++ + L G ALKLF +M+ G +PD +F+ +L+AC+H GL
Sbjct: 590 EKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLA 649
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG F SM ++YGI+P +H+ C +D+LGRAG L +AEE + + +V TLL
Sbjct: 650 DEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLG 709
Query: 481 ACRLRRDVVIGERLAKQLFH-LQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
ACR RDV G RLA + L P S YV+LSN+ A G W + A R ++ GL+K
Sbjct: 710 ACRKYRDVDRG-RLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRK 768
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ S IE++ +F + SH + EI L+ L
Sbjct: 769 QAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERL 804
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 144/514 (28%), Positives = 264/514 (51%), Gaps = 27/514 (5%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
++L C++ L QG S+HA +++ G++ +++N +L++Y CG + A +F+ M ER
Sbjct: 133 AVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ER 191
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIH 123
+LVSW+A I+ + Q+G+ +ALE F +M L P +S CA I+ + + IH
Sbjct: 192 DLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKIR---QARAIH 248
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ + G V +L S Y ++G+ A V+ A E ++VS+NA++ + ++
Sbjct: 249 SIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMS 308
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ +F ML +G+ P + + CS LR G ++H ++ L+ + +GN ++
Sbjct: 309 EAALLFARMLHEGIPPSKVTLVNASTGCS---SLRFGRMIHACALEKGLDRDIVLGNALL 365
Query: 244 ALYSKFNLIGEAEKAFRLIE--EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+Y++ G E+A L E + +SWNT IA S ++ L +F+ M + G+ P
Sbjct: 366 DMYTR---CGSPEEARHLFEGIPGNAVSWNTMIAGSSQKGQMKRALELFQRMQLE-GMAP 421
Query: 302 DDFTFASILAACAG----LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
T+ ++L A A ++ G+++H+ ++ + +G A+V MYA CG I +
Sbjct: 422 VRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEA 481
Query: 358 YKLFNE--MLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
F M R +VVSWN II++ + H G AL F +M G+ P+ +T + +L AC
Sbjct: 482 AASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDAC 541
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
A + EG + + + G+ ++ T L + GR G L A E +K + +D ++
Sbjct: 542 AGAAALTEGVIVHDHLRHS-GMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVI 600
Query: 475 LGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSP 508
+++A ++ + GE L K + +Q + P
Sbjct: 601 FNAMIAA--YSQNGLAGEAL-KLFWRMQQEGSRP 631
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 215/409 (52%), Gaps = 14/409 (3%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL + L QG +HA ++ +G++ ++ NH+L LY KC + +VF + R+
Sbjct: 35 LLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRD 92
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
SW+ +I+ + + G+ A+ F +M + + F + + ACA + L +G+ IHA
Sbjct: 93 EASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHA 152
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ ++ G S + N L+ +Y G + A+L++ E E +LVS+NA IA ++ +
Sbjct: 153 WIVESGLEGKSVLANLLLHIYGSCGCVASAMLLF-ERMERDLVSWNAAIAANAQSGDLDM 211
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
E+F+ M +G+ P R + L +C+ +R+ +H + + LE V + +
Sbjct: 212 ALELFQRMQLEGVRPARITLVITLSVCA---KIRQARAIHSIVRESGLEQTLVVSTALAS 268
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
Y++ + +A++ F E+D++SWN + A + + +F M ++ G+ P
Sbjct: 269 AYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHE-GIPPSKV 327
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T + A G +S++ G+ IHA + L++D+ +GNAL++MY +CG + LF E
Sbjct: 328 TLVN---ASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLF-EG 383
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ N VSWNT+IA + AL+LF++M+ G+ P T++ LL A
Sbjct: 384 IPGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEA 432
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 167/352 (47%), Gaps = 11/352 (3%)
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
L +G++IHA + G +GN L+ +Y+K D V+ + S+ +I
Sbjct: 45 LSQGRRIHARIVSLGLEE--ELGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITA 102
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+ E+ Q ++ +F M ++G+ D +F L+ C+ DL +G +H V+ LE
Sbjct: 103 YTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGK 162
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
+ N ++ +Y + A F + E+DL+SWN IAA + D + L +F+ M
Sbjct: 163 SVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDLDMALELFQRMQL 221
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
+ GVRP T L+ C A ++ + IH+ + L Q + V AL + YA+ G +
Sbjct: 222 E-GVRPARITLVITLSVC---AKIRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLD 277
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ ++F+ R+VVSWN ++ A+A H A LF +M GI P VT + T C+
Sbjct: 278 QAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCS 337
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+ A ++EK G+ DI L+D+ R G EA + P
Sbjct: 338 SLRFGRMIHAC--ALEK--GLDRDIVLGNALLDMYTRCGSPEEARHLFEGIP 385
>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
Length = 1027
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 190/576 (32%), Positives = 320/576 (55%), Gaps = 7/576 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C+ + G +H +K + + V+N L++Y+K G + A+ +F + +
Sbjct: 431 SILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYK 490
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIH 123
+ +SW+A+ G Q E A+ +M L P++ F++AI+AC+ I++ G+QIH
Sbjct: 491 DSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIH 550
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
++K+G S VG+SLI +Y K G + ++ + ++V NALIAGFV+N +
Sbjct: 551 CLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNED 610
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK-LESNPFVGNTI 242
+ ++F+ +L+ GL P +F+ L CS S + G +HC T+K L + +G ++
Sbjct: 611 EAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSL 670
Query: 243 MALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+Y K ++ +A K + + K+L W I+ + + L F M + + VR
Sbjct: 671 AGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCN-VRS 729
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D+ TFAS+L AC+ + + GK+IH + + +AL++MY+KCG + S++ F
Sbjct: 730 DEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAF 789
Query: 362 NEMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
E+ ++ +++ WN++I A + AL LF++M+ IKPD VTF+G+L AC H+GL+
Sbjct: 790 KELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLI 849
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG +F SM K YG++P ++H+ C IDLLGR G L EA+E + P D +V T L+
Sbjct: 850 SEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLA 909
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ +D G+ A++L L+P +S YVLLS+L+A+ G W + R+ +++ G+ K
Sbjct: 910 ACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKF 969
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
P S I V F V + H I ML L+
Sbjct: 970 PGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLT 1005
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/413 (33%), Positives = 237/413 (57%), Gaps = 4/413 (0%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
SS++ + Q+ ++L + + KMG PD + +++ A G++ A + +M
Sbjct: 228 SSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPT 287
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
+ V+W+A+ISGH Q+G L + M L P FAS +SA A +++ V+GQQ+
Sbjct: 288 PSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQM 347
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
HA ++ G + FVG+SLI++Y K G SDA V+ + E N+V +NA++ GFV+N+ P
Sbjct: 348 HAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELP 407
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E+ +F+ M+R L D F+F L C+ + G +HC+T+K ++ + FV N
Sbjct: 408 EEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANAT 467
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +YSK+ IG+A+ F LI KD ISWN + + E+ + + K M HG+ PD
Sbjct: 468 LDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRM-RLHGITPD 526
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
D +F++ + AC+ + + + GKQIH I+ + + VG++L+++Y+K G + S K+F
Sbjct: 527 DVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFA 586
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
++ ++V N +IA + A++LF+Q+ G+KP SVTF +L+ C+
Sbjct: 587 QVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS 639
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 137/481 (28%), Positives = 245/481 (50%), Gaps = 7/481 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L + KA +G +HAA + G+ +V V + ++NLYAKCG A+ VFD
Sbjct: 327 TFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLS 386
Query: 64 SERNLVSWSAMISGHHQ---AGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
E+N+V W+AM++G Q E + ++ + L +E+ F S + AC + S G+
Sbjct: 387 CEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGK 446
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H ++K FV N+ + MY K G DA ++ + +S+NAL G +N
Sbjct: 447 QVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNL 506
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ E+ + K M G+ PD SF+ + CS G +HCL +K + SN VG+
Sbjct: 507 EEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGS 566
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ LYSK + + K F ++ ++ N IA + ++ + +F+++ D G++
Sbjct: 567 SLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKD-GLK 625
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCSYK 359
P TF+SIL+ C+G + GKQ+H + ++ L D +G +L +Y K ++ + K
Sbjct: 626 PSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANK 685
Query: 360 LFNEML-HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
L EM H+N+ W II+ +A + G +L F +M+ ++ D TF +L AC+
Sbjct: 686 LLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVT 745
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
+G+ + K+ G + LID+ + G ++ + E K+ QD + ++
Sbjct: 746 AFADGKEIHGLITKS-GFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSM 804
Query: 479 L 479
+
Sbjct: 805 I 805
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 218/452 (48%), Gaps = 34/452 (7%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
++ +L CS+ L G +H V+K G V ++++YAKCG + AR+VFD ++
Sbjct: 161 LAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIA 220
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHA 124
+ + WS+MI+ +H+ G + AL FS+M
Sbjct: 221 CPDTICWSSMIACYHRVGCYQEALALFSRMD----------------------------- 251
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
K G A ++IS G A + + P+ V++NA+I+G ++
Sbjct: 252 ---KMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFN 308
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
++K M GL P R +FA L + +G +H V L++N FVG++++
Sbjct: 309 VLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLIN 368
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
LY+K +A+ F L EK+++ WN + E+ + +F+ M + ++ D+F
Sbjct: 369 LYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMR-YTLQTDEF 427
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
TF SIL AC L+S GKQ+H I+ ++ + V NA ++MY+K G I + LF+ +
Sbjct: 428 TFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI 487
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+++ +SWN + A + A+ + ++M+ GI PD V+F + AC++ + G+
Sbjct: 488 PYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGK 547
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+ + YGI + + LIDL + G +
Sbjct: 548 Q-IHCLAIKYGICSNHAVGSSLIDLYSKHGDV 578
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 138/336 (41%), Gaps = 38/336 (11%)
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ +H L+ G + +G+SL+ +Y K G A G A E + ++L++ +
Sbjct: 76 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135
Query: 180 QQPEKGFEVFK-LMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
P F+ + G PD+F A L CS L G +HC VK S+ F
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 195
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++ +Y+K + A + F I D I W++ IA Y++ L++F M + G
Sbjct: 196 EAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRM-DKMG 254
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
PD T +I++ A + H
Sbjct: 255 SAPDQVTLVTIISTLASSGRLDHAT----------------------------------- 279
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
L +M + V+WN +I+ HA L + L L++ M++ G+ P TF +L+A +
Sbjct: 280 ALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMK 339
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
EG+ ++ +G+ ++ + LI+L + G
Sbjct: 340 AFVEGQQ-MHAAAVMHGLDANVFVGSSLINLYAKCG 374
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 194/609 (31%), Positives = 313/609 (51%), Gaps = 71/609 (11%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQP-DVIVSNHVLNLYAKCGKMILARKVF 60
+++ + L+ C +T + Q L + + QP D + N +L+LYAK GK+ A+ +F
Sbjct: 22 SEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLF 81
Query: 61 DEMSERNLVSWSAMISGHHQAG--EHLLA-----------------------------LE 89
D+M +R+ SW+A++S + ++G ++L A LE
Sbjct: 82 DKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLE 141
Query: 90 FFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYM 146
F +M P EY S ++A A + L G+QIH + + F+ N+L MY
Sbjct: 142 LFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYA 201
Query: 147 KVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAG 206
K G A ++ + NLVS+N +I+G+ +N QPEK + M G +PD+ + +
Sbjct: 202 KCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMS- 260
Query: 207 GLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKD 266
TI+A Y + + EA + F +EKD
Sbjct: 261 ----------------------------------TIIAAYCQCGRVDEARRVFSEFKEKD 286
Query: 267 LISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
++ W + + E L +F EM +H + PD +T +S++++CA LAS+ HG+ +H
Sbjct: 287 IVCWTAMMVGYAKNGREEDALLLFNEMLLEH-IEPDSYTLSSVVSSCAKLASLHHGQAVH 345
Query: 327 AHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGG 386
I LN ++ V +AL++MY+KCG I + +FN M RNVVSWN +I A +
Sbjct: 346 GKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDK 405
Query: 387 SALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCL 446
AL+LFE M KPD+VTFIG+L+AC H +++G+ YF+S+ +G++P ++H+ C+
Sbjct: 406 DALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACM 465
Query: 447 IDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTT 506
++LLGR G++ +A K D ++ TLLS C + D+V E A+ LF L PT
Sbjct: 466 VNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIA 525
Query: 507 SPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIG 566
PY++LSN+YAS G W DVA R ++K +KK +S IE+ +FT + +H +
Sbjct: 526 VPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESE 585
Query: 567 EINYMLKTL 575
+I L L
Sbjct: 586 DIYEKLNML 594
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 192/536 (35%), Positives = 297/536 (55%), Gaps = 15/536 (2%)
Query: 55 LARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
LA + + + N+ SW+++I+ + G+ + AL FS + L+P F I +C+
Sbjct: 1094 LATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCS 1153
Query: 112 GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNA 171
+ LV G+ H + FG+ + FV ++LI MY K G DA ++ E N+VS+ +
Sbjct: 1154 ALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTS 1213
Query: 172 LIAGFVENQQPEKGFEVFKLMLRQGL-------LP-DRFSFAGGLEICSVSNDLRKGMI- 222
+I G+V+N+Q + +FK L + +P D L CS + KG+
Sbjct: 1214 MITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSG--KGITE 1271
Query: 223 -LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
+H VK + + VGNT+M Y+K ++K F +EEKD ISWN+ IA +
Sbjct: 1272 GVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSG 1331
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
+ L VF M GVR + T +++L ACA +++ GK IH +I+M L +V VG
Sbjct: 1332 LSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVG 1391
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
++++MY KCG + + K F+ M +NV SW ++A + H AL +F +M G+K
Sbjct: 1392 TSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVK 1451
Query: 402 PDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
P+ +TF+ +L AC+HAGLV+EG +FN+M+ Y I P IEH+ C++DL GRAG L EA
Sbjct: 1452 PNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYN 1511
Query: 462 YTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGM 521
K+ + D +V G+LL ACR+ ++V +GE A++LF L P YVLLSNLYA G
Sbjct: 1512 LIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGR 1571
Query: 522 WGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
W DV R ++K+ L K P +S++E++G F V + H I L+ L+L
Sbjct: 1572 WADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTL 1627
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 192/376 (51%), Gaps = 30/376 (7%)
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+QIHA ++ G ++ + LI +Y G + A+L++ + P ++N +I N
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
E+ ++K M+ QG+ D+F+F ++ C+ + G ++H +K + FV
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N ++ Y K A K F + ++++SW T I+ C D ++ +F E+ + + V
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223
Query: 300 R------------------------------PDDFTFASILAACAGLASVQHGKQIHAHL 329
P+++T S++ AC + + G+ IH +
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
I+ + V +G AL++MY+KCG I + ++F M +++ +WN++I + H LG AL
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEAL 343
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
LF +M+ +KPD++TFIG+L AC H VKEG AYF M + YGI+P EH+ C+ +L
Sbjct: 344 NLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTEL 403
Query: 450 LGRAGKLLEAEEYTKK 465
R+ L EA + TK+
Sbjct: 404 YARSNNLDEAFKSTKE 419
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 217/428 (50%), Gaps = 27/428 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S + CS L G H G + D+ VS+ ++++Y+KCG++ AR +FDE+
Sbjct: 1144 SFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEI 1203
Query: 64 SERNLVSWSAMISGH---HQAGEHLLALEFFSQMHL-------LP-NEYIFASAISACAG 112
RN+VSW++MI+G+ QA LL + F + +P + + S +SAC+
Sbjct: 1204 PLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSR 1263
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
+ + +H + +K G+ VGN+L+ Y K G + V+ E + +S+N++
Sbjct: 1264 VSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSM 1323
Query: 173 IAGFVENQQPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK 231
IA + ++ + EVF M+R G+ + + + L C+ + LR G +H +K
Sbjct: 1324 IAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMD 1383
Query: 232 LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK 291
LE N VG +I+ +Y K + A+K F ++EK++ SW +A ++ L +F
Sbjct: 1384 LEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFY 1443
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN--ALVNMYA 349
+M GV+P+ TF S+LAAC+ V+ G + ++ + + + G+ + +V+++
Sbjct: 1444 KMVR-AGVKPNYITFVSVLAACSHAGLVEEGWHWF-NAMKHKYDIEPGIEHYGCMVDLFG 1501
Query: 350 KCGLISCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGG-SALKLFEQMKATGIKPDS 404
+ G ++ +Y L M + + V W +++ A H N LG +A KLFE + PD+
Sbjct: 1502 RAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFE------LDPDN 1555
Query: 405 VTFIGLLT 412
+ LL+
Sbjct: 1556 CGYYVLLS 1563
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 188/403 (46%), Gaps = 49/403 (12%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
AK LL +C K L+Q +HA +++ G+ D +++ +++LY+ G++ A +F
Sbjct: 27 AKKALFLLQNCKNFKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFY 83
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
++ +W+ +I + G AL + M + +++ F I AC S+
Sbjct: 84 QIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDL 143
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV--------------------- 157
G+ +H +K+G++ FV N+LI Y K G++ AL V
Sbjct: 144 GKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLIS 203
Query: 158 ----------YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGG 207
+ E N+VS+ A+I G++ NQQPE+ E+FK M + + P+ ++
Sbjct: 204 CGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSL 263
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDL 267
++ C+ L G +H +K +E ++G ++ +YSK I +A + F + K L
Sbjct: 264 IKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSL 323
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHA 327
+WN+ I + ++ L++F EM + V+PD TF +L AC + +V+ G A
Sbjct: 324 PTWNSMITSLGVHGLGQEALNLFSEMERVN-VKPDAITFIGVLCACVHIKNVKEG---CA 379
Query: 328 HLIRMRLNQDVGVG------NALVNMYAKCGLISCSYKLFNEM 364
+ RM Q G+ + +YA+ + ++K E+
Sbjct: 380 YFTRM--TQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 163/323 (50%), Gaps = 17/323 (5%)
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
S+ A Y + N+ S+N++IA + F + + GL+P R SF ++
Sbjct: 1092 SNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKS 1151
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
CS DL G + H E++ FV + ++ +YSK + +A F I ++++SW
Sbjct: 1152 CSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSW 1211
Query: 271 NTFIAACSHCADYEKGLSVFK-------EMSNDHGVRPDDFTFASILAACAGLASVQHGK 323
+ I + L +FK E+ + + V D S+L+AC+ ++ +
Sbjct: 1212 TSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITE 1271
Query: 324 QIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR 383
+H +++ + +GVGN L++ YAKCG S K+F+ M ++ +SWN++IA +A
Sbjct: 1272 GVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSG 1331
Query: 384 LGGSALKLFEQM-KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEH 442
L G AL++F M + G++ ++VT +L AC HAG ++ G+ + + I D+E+
Sbjct: 1332 LSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQV-----IKMDLEY 1386
Query: 443 FTC----LIDLLGRAGKLLEAEE 461
C +ID+ + G++ A++
Sbjct: 1387 NVCVGTSIIDMYCKCGRVEMAKK 1409
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 100/183 (54%), Gaps = 13/183 (7%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++S++L C+ AL+ G +H V+KM ++ +V V ++++Y KCG++ +A+K FD
Sbjct: 1353 AVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFD 1412
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
M E+N+ SW+AM++G+ G AL+ F +M + PN F S ++AC+ + +
Sbjct: 1413 RMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEE 1472
Query: 119 GQQI-----HAYSLKFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNAL 172
G H Y ++ G I G ++ ++ + G ++A L+ +P+ V + +L
Sbjct: 1473 GWHWFNAMKHKYDIEPG---IEHYG-CMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSL 1528
Query: 173 IAG 175
+
Sbjct: 1529 LGA 1531
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
+H +QIHA +IR L+ D + L+++Y+ G I+ + LF ++ + +WN II A+
Sbjct: 41 KHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRAN 100
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
+ L AL L++ M GI D TF ++ AC + + G+ S+ K YG S D
Sbjct: 101 TINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIK-YGFSGD 159
Query: 440 IEHFTCLIDLLGRAG 454
+ LID + G
Sbjct: 160 VFVQNNLIDFYFKCG 174
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 204/580 (35%), Positives = 312/580 (53%), Gaps = 7/580 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLK-MGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
A ++ LL + +++ G +HA ++K + P ++N+++N+Y+K AR V
Sbjct: 6 ADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVL 65
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLV 117
RN+VSW+++ISG Q G AL F +M ++PN++ F A A A ++ V
Sbjct: 66 RLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPV 125
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+QIHA ++K G FVG S MY K DA ++ E E NL ++NA I+ V
Sbjct: 126 TGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSV 185
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ +P + E F R P+ +F L CS L GM LH L ++ +++
Sbjct: 186 TDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVS 245
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N ++ Y K I +E F + K+ +SW + +AA + EK SV S
Sbjct: 246 VCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKA-SVLYLRSRKD 304
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
V DF +S+L+ACAG+A ++ G+ IHAH ++ + + + VG+ALV+MY KCG I S
Sbjct: 305 IVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDS 364
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM--KATGIKPDSVTFIGLLTACN 415
+ F+EM +N+V+ N++I +A+ AL LFE+M + G P+ +TF+ LL+AC+
Sbjct: 365 EQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACS 424
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
AG V+ G F+SM TYGI P EH++C++D+LGRAG + A E+ KK P+ V
Sbjct: 425 RAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVW 484
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
G L +ACR+ +G A+ LF L P + +VLLSN +A+ G W + R+ LK
Sbjct: 485 GALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGV 544
Query: 536 GLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
G+KK YS I V+ F + SH EI L L
Sbjct: 545 GIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKL 584
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 188/576 (32%), Positives = 314/576 (54%), Gaps = 12/576 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+SL+ + L+Q +HA +L +G+Q + +++ + G + AR+VFD++
Sbjct: 25 ASLIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPR 81
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQI 122
+ W+A+I G+ + AL +S M L P+ + F + AC+G+ L G+ +
Sbjct: 82 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 141
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF---EPNLVSFNALIAGFVEN 179
HA + G+ + FV N LI++Y K A V+ E E +VS+ A+++ + +N
Sbjct: 142 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVF-EGLPLPERTIVSWTAIVSAYAQN 200
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+P + E+F M + + PD + L + DL++G +H VK LE P +
Sbjct: 201 GEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLL 260
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ +Y+K + A+ F ++ +LI WN I+ + + + +F EM N V
Sbjct: 261 ISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINK-DV 319
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
RPD + S ++ACA + S++ + ++ ++ R DV + +AL++M+AKCG + +
Sbjct: 320 RPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARL 379
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F+ L R+VV W+ +I + H A+ L+ M+ G+ P+ VTF+GLL ACNH+G+
Sbjct: 380 VFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGM 439
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V+EG +FN M + I+P +H+ C+IDLLGRAG L +A E K P+ V G LL
Sbjct: 440 VREGWWFFNLMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALL 498
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
SAC+ R V +GE A+QLF + P+ T YV LSNLYA+ +W VA R +K+ GL K
Sbjct: 499 SACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNK 558
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ S +EV+G E F V + SH + EI ++ +
Sbjct: 559 DVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWI 594
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 179/348 (51%), Gaps = 22/348 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMG--IQPDVIVSNHVLNLYAKCGKMILARKVFD 61
++ S+L+ + + L+QG S+HA+V+KMG I+PD+++S + +YAKCG++ A+ +FD
Sbjct: 224 ALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS--LNTMYAKCGQVATAKILFD 281
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
+M NL+ W+AMISG+ + G A++ F +M + P+ SAISACA + SL +
Sbjct: 282 KMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQ 341
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+ ++ Y + Y F+ ++LI M+ K G A LV+ + ++V ++A+I G+
Sbjct: 342 ARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGL 401
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ + + +++ M R G+ P+ +F G L C+ S +R+G L K+
Sbjct: 402 HGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMADHKINPQQQH 461
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIE----EKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
++ L + G ++A+ +I+ + + W ++AC E G +++
Sbjct: 462 YACVIDLLGR---AGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLF 518
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR---LNQDVG 339
+ + S L A A L ++ +RM+ LN+DVG
Sbjct: 519 SIDPSNTGHYVQLSNLYAAARL-----WDRVAEVRVRMKEKGLNKDVG 561
>gi|242095158|ref|XP_002438069.1| hypothetical protein SORBIDRAFT_10g007640 [Sorghum bicolor]
gi|241916292|gb|EER89436.1| hypothetical protein SORBIDRAFT_10g007640 [Sorghum bicolor]
Length = 563
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 191/550 (34%), Positives = 305/550 (55%), Gaps = 10/550 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQ----PDVI-VSNHVLNLYAKCGKMILARKVF 60
SSLL C A +QG S+H + PD++ +S ++ Y+ G + AR VF
Sbjct: 15 SSLLQSCIGANAFRQGKSVHHRAIITASSDPSPPDLLHLSTKLVMFYSHFGDVAAARAVF 74
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLV 117
D M R++VSW+AM+SG+ + G ALE F+ M PN++ F SA ACAG +
Sbjct: 75 DGMPHRSVVSWTAMVSGYAKNGRAPEALELFALMLRSGARPNQFTFGSAARACAGGRCAR 134
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+Q+HA + K +A FV ++L+ M+++ G DA ++ E +LVS+NAL+ GFV
Sbjct: 135 SGEQVHACAAKGRHAGDMFVQSALMDMHLRCGSVGDARRLFAEMERKDLVSWNALMRGFV 194
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
E +F MLR G+LPD F+F L+ C + + ++H +K
Sbjct: 195 ERGHYSDALGLFASMLRDGMLPDHFTFGSALKACGAISVIFNVELIHTCIIKLGYWDEKV 254
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY-EKGLSVFKEMSND 296
+++ Y+K + A + I E DL+S I+ S +Y E + +F ++ +
Sbjct: 255 ATASLIDSYAKCRSLSSARVIYDSICEPDLVSSTALISDHSMDRNYSEDAMKLFCKIHRE 314
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
G+R D +++L CA +AS++ G QIHA++ + + D+ + NALV+MYAK G
Sbjct: 315 -GLRIDGILLSALLGVCANVASIKFGTQIHAYMHKKQPMGDLALDNALVDMYAKSGEYLD 373
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
S + F+EM RNV+SW ++I A A H G A+ LF +M+ G+KP+ VTF+ LL+AC+H
Sbjct: 374 SRRAFDEMPSRNVISWTSLITACAQHGFGEDAVTLFARMEEDGVKPNDVTFLSLLSACSH 433
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
+G++ +G YF SM YGI P +H++ IDLL R G+L +A +K + G
Sbjct: 434 SGMMNKGMEYFTSMMNKYGIDPRAKHYSSAIDLLARGGQLEDAWMLLQKTNTECKSSMYG 493
Query: 477 TLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSG 536
+L AC++ ++ +GE A LF + P ++ Y +L+N+YA +W D RK+L ++
Sbjct: 494 AMLGACKVHGNIPLGETAANNLFSIDPKSSVNYAVLANMYAESCLWEDAQRTRKLLAETS 553
Query: 537 LKKEPSYSMI 546
KE +S+I
Sbjct: 554 KGKEVGFSVI 563
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 189/387 (48%), Gaps = 9/387 (2%)
Query: 102 IFASAISACAGIQSLVKGQQIHAYSLKFGYASIS-----FVGNSLISMYMKVGYSSDALL 156
+++S + +C G + +G+ +H ++ + S + L+ Y G + A
Sbjct: 13 LYSSLLQSCIGANAFRQGKSVHHRAIITASSDPSPPDLLHLSTKLVMFYSHFGDVAAARA 72
Query: 157 VYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSND 216
V+ ++VS+ A+++G+ +N + + E+F LMLR G P++F+F C+
Sbjct: 73 VFDGMPHRSVVSWTAMVSGYAKNGRAPEALELFALMLRSGARPNQFTFGSAARACAGGRC 132
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
R G +H K + + FV + +M ++ + +G+A + F +E KDL+SWN +
Sbjct: 133 ARSGEQVHACAAKGRHAGDMFVQSALMDMHLRCGSVGDARRLFAEMERKDLVSWNALMRG 192
Query: 277 CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
Y L +F M D G+ PD FTF S L AC ++ + + + IH +I++
Sbjct: 193 FVERGHYSDALGLFASMLRD-GMLPDHFTFGSALKACGAISVIFNVELIHTCIIKLGYWD 251
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR-LGGSALKLFEQM 395
+ +L++ YAKC +S + +++ + ++VS +I+ H+ R A+KLF ++
Sbjct: 252 EKVATASLIDSYAKCRSLSSARVIYDSICEPDLVSSTALISDHSMDRNYSEDAMKLFCKI 311
Query: 396 KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGK 455
G++ D + LL C + +K G M K + D+ L+D+ ++G+
Sbjct: 312 HREGLRIDGILLSALLGVCANVASIKFGTQIHAYMHKKQPMG-DLALDNALVDMYAKSGE 370
Query: 456 LLEAEEYTKKFPLGQDPIVLGTLLSAC 482
L++ + P ++ I +L++AC
Sbjct: 371 YLDSRRAFDEMP-SRNVISWTSLITAC 396
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 86/157 (54%), Gaps = 4/157 (2%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+S+LL C+ +++ G +HA + K D+ + N ++++YAK G+ + +R+ FDEM
Sbjct: 323 LSALLGVCANVASIKFGTQIHAYMHKKQPMGDLALDNALVDMYAKSGEYLDSRRAFDEMP 382
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQ 121
RN++SW+++I+ Q G A+ F++M + PN+ F S +SAC+ + KG +
Sbjct: 383 SRNVISWTSLITACAQHGFGEDAVTLFARMEEDGVKPNDVTFLSLLSACSHSGMMNKGME 442
Query: 122 IHAYSL-KFGYASISFVGNSLISMYMKVGYSSDALLV 157
+ K+G + +S I + + G DA ++
Sbjct: 443 YFTSMMNKYGIDPRAKHYSSAIDLLARGGQLEDAWML 479
>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
Length = 1037
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 190/576 (32%), Positives = 320/576 (55%), Gaps = 7/576 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C+ + G +H +K + + V+N L++Y+K G + A+ +F + +
Sbjct: 441 SILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYK 500
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIH 123
+ +SW+A+ G Q E A+ +M L P++ F++AI+AC+ I++ G+QIH
Sbjct: 501 DSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIH 560
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
++K+G S VG+SLI +Y K G + ++ + ++V NALIAGFV+N +
Sbjct: 561 CLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNED 620
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK-LESNPFVGNTI 242
+ ++F+ +L+ GL P +F+ L CS S + G +HC T+K L + +G ++
Sbjct: 621 EAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSL 680
Query: 243 MALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+Y K ++ +A K + + K+L W I+ + + L F M + + VR
Sbjct: 681 AGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCN-VRS 739
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D+ TFAS+L AC+ + + GK+IH + + +AL++MY+KCG + S++ F
Sbjct: 740 DEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAF 799
Query: 362 NEMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
E+ ++ +++ WN++I A + AL LF++M+ IKPD VTF+G+L AC H+GL+
Sbjct: 800 KELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLI 859
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG +F SM K YG++P ++H+ C IDLLGR G L EA+E + P D +V T L+
Sbjct: 860 SEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLA 919
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ +D G+ A++L L+P +S YVLLS+L+A+ G W + R+ +++ G+ K
Sbjct: 920 ACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKF 979
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
P S I V F V + H I ML L+
Sbjct: 980 PGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLT 1015
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/413 (33%), Positives = 237/413 (57%), Gaps = 4/413 (0%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
SS++ + Q+ ++L + + KMG PD + +++ A G++ A + +M
Sbjct: 238 SSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPT 297
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
+ V+W+A+ISGH Q+G L + M L P FAS +SA A +++ V+GQQ+
Sbjct: 298 PSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQM 357
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
HA ++ G + FVG+SLI++Y K G SDA V+ + E N+V +NA++ GFV+N+ P
Sbjct: 358 HAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELP 417
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E+ +F+ M+R L D F+F L C+ + G +HC+T+K ++ + FV N
Sbjct: 418 EEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANAT 477
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +YSK+ IG+A+ F LI KD ISWN + + E+ + + K M HG+ PD
Sbjct: 478 LDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRM-RLHGITPD 536
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
D +F++ + AC+ + + + GKQIH I+ + + VG++L+++Y+K G + S K+F
Sbjct: 537 DVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFA 596
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
++ ++V N +IA + A++LF+Q+ G+KP SVTF +L+ C+
Sbjct: 597 QVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS 649
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 137/481 (28%), Positives = 245/481 (50%), Gaps = 7/481 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L + KA +G +HAA + G+ +V V + ++NLYAKCG A+ VFD
Sbjct: 337 TFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLS 396
Query: 64 SERNLVSWSAMISGHHQ---AGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
E+N+V W+AM++G Q E + ++ + L +E+ F S + AC + S G+
Sbjct: 397 CEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGK 456
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H ++K FV N+ + MY K G DA ++ + +S+NAL G +N
Sbjct: 457 QVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNL 516
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ E+ + K M G+ PD SF+ + CS G +HCL +K + SN VG+
Sbjct: 517 EEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGS 576
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ LYSK + + K F ++ ++ N IA + ++ + +F+++ D G++
Sbjct: 577 SLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKD-GLK 635
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCSYK 359
P TF+SIL+ C+G + GKQ+H + ++ L D +G +L +Y K ++ + K
Sbjct: 636 PSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANK 695
Query: 360 LFNEML-HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
L EM H+N+ W II+ +A + G +L F +M+ ++ D TF +L AC+
Sbjct: 696 LLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVT 755
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
+G+ + K+ G + LID+ + G ++ + E K+ QD + ++
Sbjct: 756 AFADGKEIHGLITKS-GFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSM 814
Query: 479 L 479
+
Sbjct: 815 I 815
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 218/452 (48%), Gaps = 34/452 (7%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
++ +L CS+ L G +H V+K G V ++++YAKCG + AR+VFD ++
Sbjct: 171 LAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIA 230
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHA 124
+ + WS+MI+ +H+ G + AL FS+M
Sbjct: 231 CPDTICWSSMIACYHRVGCYQEALALFSRMD----------------------------- 261
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
K G A ++IS G A + + P+ V++NA+I+G ++
Sbjct: 262 ---KMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFN 318
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
++K M GL P R +FA L + +G +H V L++N FVG++++
Sbjct: 319 VLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLIN 378
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
LY+K +A+ F L EK+++ WN + E+ + +F+ M + ++ D+F
Sbjct: 379 LYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMR-YTLQTDEF 437
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
TF SIL AC L+S GKQ+H I+ ++ + V NA ++MY+K G I + LF+ +
Sbjct: 438 TFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI 497
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+++ +SWN + A + A+ + ++M+ GI PD V+F + AC++ + G+
Sbjct: 498 PYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGK 557
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+ + YGI + + LIDL + G +
Sbjct: 558 Q-IHCLAIKYGICSNHAVGSSLIDLYSKHGDV 588
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 138/336 (41%), Gaps = 38/336 (11%)
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ +H L+ G + +G+SL+ +Y K G A G A E + ++L++ +
Sbjct: 86 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 145
Query: 180 QQPEKGFEVFK-LMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
P F+ + G PD+F A L CS L G +HC VK S+ F
Sbjct: 146 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 205
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++ +Y+K + A + F I D I W++ IA Y++ L++F M + G
Sbjct: 206 EAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRM-DKMG 264
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
PD T +I++ A + H
Sbjct: 265 SAPDQVTLVTIISTLASSGRLDHAT----------------------------------- 289
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
L +M + V+WN +I+ HA L + L L++ M++ G+ P TF +L+A +
Sbjct: 290 ALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMK 349
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
EG+ ++ +G+ ++ + LI+L + G
Sbjct: 350 AFVEGQQ-MHAAAVMHGLDANVFVGSSLINLYAKCG 384
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 192/587 (32%), Positives = 315/587 (53%), Gaps = 45/587 (7%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAK-CGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
L VLK G + DV++ +LN+Y + + +A K FD M ERN +WS MI+ G
Sbjct: 245 LRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGG 304
Query: 83 EHLLALEFFSQ--MHLLPNEYIFASAISACAGI-QSLVKGQQIHAYSLKFGYASISFVGN 139
A+ + + + +P++ + ++ C I ++ + +QI I N
Sbjct: 305 RIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILFEQIP--------DPIVVSWN 356
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
++I+ YM+ G +A ++ N +S+ +IAG+ +N + E+ ++ + + R G+LP
Sbjct: 357 AMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLP 416
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
S CS L G +H L VK + N +V N ++++Y K + + F
Sbjct: 417 SLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVF 476
Query: 260 RLIEEKDLISWNTFIAA----------------------------CSHCADYEKG---LS 288
+ KD +SWN+FIAA S A E+G +
Sbjct: 477 NRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVE 536
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMY 348
FK M ++H +P+ +L+ C GL S + G+QIH I+ ++ ++ V NAL++MY
Sbjct: 537 FFKTMLHEHE-KPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMY 595
Query: 349 AKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
KCG S+K+F+ M R++ +WNT I A H LG A+K++E M++ G+ P+ VTF+
Sbjct: 596 FKCGCAD-SHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFV 654
Query: 409 GLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
GLL AC+HAGLV EG +F SM + YG++P +EH+ C++DLLGR G + AE++ P+
Sbjct: 655 GLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPI 714
Query: 469 GQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGA 528
D ++ LL AC++ ++ IG R A++LF +P+ YV+LSN+Y+S GMW +VA
Sbjct: 715 EPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAEL 774
Query: 529 RKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
RK++K G+ KEP S ++++ F + H KI EI+Y L+ L
Sbjct: 775 RKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDL 821
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 188/391 (48%), Gaps = 48/391 (12%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH 95
+V + +L+ YA+ G+++ AR+VFD M ERN V+W+AM+S + Q G+ +A F M
Sbjct: 94 NVRTATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAM- 152
Query: 96 LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL 155
P+ + + NS+++ Y DA
Sbjct: 153 --PSRDVTS---------------------------------WNSMVTGYCHSRQMVDAW 177
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN 215
++ + + NLV++ +I+G+V +Q KG+++F++M +G PD+ +FA L +
Sbjct: 178 NLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQ 237
Query: 216 DLRKGMILHCLTVKCKLESNPFVGNTIMALYSK-FNLIGEAEKAFRLIEEKDLISWNTFI 274
DL +L L +K ES+ +G +I+ +Y++ + + A K F + E++ +W+T I
Sbjct: 238 DLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMI 297
Query: 275 AACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRL 334
AA SH + ++V+ R + S A GLA G+ A ++ ++
Sbjct: 298 AALSHGGRIDAAIAVYG--------RDPVKSIPSQTALLTGLARC--GRITEARILFEQI 347
Query: 335 NQDVGVG-NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFE 393
+ V NA++ Y + G++ + +LF+ M RN +SW +IA +A + AL L +
Sbjct: 348 PDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQ 407
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+ G+ P + AC+H G ++ G
Sbjct: 408 ALHRNGMLPSLSSLTSSFLACSHIGALETGR 438
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 139/304 (45%), Gaps = 41/304 (13%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMIL---------------- 55
CS AL+ G +H+ +K G Q + V N ++++Y KC M
Sbjct: 428 CSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSW 487
Query: 56 ---------------ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLL 97
AR +FD M R++VSW+ +IS + QA A+EFF M H
Sbjct: 488 NSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEK 547
Query: 98 PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV 157
PN I +S C G+ S GQQIH ++K G S V N+L+SMY K G +D+ V
Sbjct: 548 PNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCG-CADSHKV 606
Query: 158 YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDL 217
+ E ++ ++N I G ++ + ++++ M G+LP+ +F G L CS + +
Sbjct: 607 FDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLV 666
Query: 218 RKG-MILHCLTVKCKLESNPFVGN--TIMALYSKFNLIGEAEK-AFRLIEEKDLISWNTF 273
+G ++ L P + + ++ L + + AEK + + E D + W+
Sbjct: 667 DEGWQFFKSMSRDYGL--TPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSAL 724
Query: 274 IAAC 277
+ AC
Sbjct: 725 LGAC 728
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 92/186 (49%), Gaps = 6/186 (3%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
++ LL C + + G +H +K G+ ++IV+N ++++Y KCG + KVFD M
Sbjct: 553 LTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCG-CADSHKVFDSME 611
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQ 121
ER++ +W+ I+G Q G A++ + M +LPNE F ++AC+ + +G Q
Sbjct: 612 ERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQ 671
Query: 122 -IHAYSLKFGYASISFVGNSLISMYMKVGYSSDA-LLVYGEAFEPNLVSFNALIAGFVEN 179
+ S +G + ++ + + G A +Y EP+ V ++AL+ +
Sbjct: 672 FFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIH 731
Query: 180 QQPEKG 185
+ E G
Sbjct: 732 KNAEIG 737
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
++ + EA + F + +D+I+WN+ I+A + E +F +S + VR T
Sbjct: 44 ARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGN-VR----TA 98
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
+L+ A L V +++ + ++ NA+V+ Y + G I+ + +LF+ M
Sbjct: 99 TILLSGYARLGRVLDARRVFDGMP----ERNTVAWNAMVSCYVQNGDITMARRLFDAMPS 154
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
R+V SWN+++ + + R A LF+QM + +V G + H +G
Sbjct: 155 RDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHG----KGWDI 210
Query: 427 FNSMEKTYGISPDIEHFTCLI 447
F M G SPD +F ++
Sbjct: 211 FRMMHHE-GASPDQSNFASVL 230
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
D +A + A+ G + + ++F+ M HR++++WN++I+A+ N + A LF+ +
Sbjct: 32 DKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAIS 91
Query: 397 ATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
++ ++ LL+ G V + F+ M +
Sbjct: 92 GGNVRTATI----LLSGYARLGRVLDARRVFDGMPE 123
>gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 700
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 191/561 (34%), Positives = 302/561 (53%), Gaps = 4/561 (0%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+S +L C ++ + G SLHA +K + V V + +L++Y + GK+ + +VF EM
Sbjct: 105 VSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVFSEMP 164
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQQ 121
RN V+W+A+I+G AG + L +FS+M + + FA A+ ACAG++ + G+Q
Sbjct: 165 FRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKYGKQ 224
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
IH + + G+ + +V NSL +MY + G D L ++ E ++VS+ +LI +
Sbjct: 225 IHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRIGH 284
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
EK E F M + P+ +FA C+ + L G LHC L + V N+
Sbjct: 285 EEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNS 344
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+M +YS + A F+ + +D+ISW+T I S E+ F M G +P
Sbjct: 345 MMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWM-RQSGPKP 403
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
DF AS+L+ +A ++ G+Q+HA L Q+ V + L+NMY+KCG I + K+F
Sbjct: 404 TDFALASLLSVSGNMAVLEGGRQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIF 463
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
E ++VS +I +A H A+ LFE+ G PDSVTFI +LTAC H+G +
Sbjct: 464 EETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFSPDSVTFISVLTACTHSGQLD 523
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
G YFN M++ Y + P EH+ C++DLL RAG+L EAE+ + +D +V TLL A
Sbjct: 524 LGFHYFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLSEAEKMIDEMSWKKDDVVWTTLLIA 583
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
C+ + D+ G R A+++ L PT + V L+N+Y+S G + A RK +K G+ KEP
Sbjct: 584 CKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEP 643
Query: 542 SYSMIEVQGTFEKFTVAEFSH 562
+S I+++ F + H
Sbjct: 644 GWSSIKIKDCVSAFVSGDRFH 664
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/445 (28%), Positives = 230/445 (51%), Gaps = 7/445 (1%)
Query: 22 ISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQA 81
ISL ++ IQ +N L G + +AR+VFD+M R++VSW+A+I G+ A
Sbjct: 19 ISLLEKPVEKTIQVVTFDTNSHLRSLINAGNLRVARQVFDKMPHRDIVSWTAIIKGYVTA 78
Query: 82 GEHLLALEFFSQMHLL-----PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF 136
A+ FS M ++ P+ + + + AC ++ G+ +HAY++K S F
Sbjct: 79 NNSDEAMILFSAMRVVDPAVSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVF 138
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
VG+SL+ MY +VG + V+ E N V++ A+I G V + ++G F M
Sbjct: 139 VGSSLLDMYKRVGKIEKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSE 198
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
L D F+FA L+ C+ ++ G +H + ++ +V N++ +Y++ + +
Sbjct: 199 ELSDTFTFAIALKACAGLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGL 258
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
F + E+D++SW + I A + EK + F +M N V P++ TFA++ +ACA L
Sbjct: 259 CLFENMSERDVVSWTSLIVAYNRIGHEEKAVETFIKMRNSQ-VPPNEQTFATMFSACASL 317
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
+ + G+Q+H ++ + LN + V N+++ MY+ CG + + LF M R+++SW+TII
Sbjct: 318 SRLVWGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTII 377
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
++ G A K F M+ +G KP LL+ + ++ EG +++ +G+
Sbjct: 378 GGYSQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVL-EGGRQVHALAFCFGL 436
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEE 461
+ + LI++ + G + EA +
Sbjct: 437 EQNSTVRSTLINMYSKCGNIKEASK 461
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 146/292 (50%), Gaps = 11/292 (3%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++ +++ C+ L G LH V +G+ + VSN ++ +Y+ CGK+ A +F
Sbjct: 305 QTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQG 364
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKG 119
M R+++SWS +I G+ QAG A ++FS M P ++ AS +S + L G
Sbjct: 365 MRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVLEGG 424
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+HA + FG S V ++LI+MY K G +A ++ E ++VS A+I G+ E+
Sbjct: 425 RQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEETDRDDIVSLTAMINGYAEH 484
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFV 238
+ ++ ++F+ L+ G PD +F L C+ S L G + + K +
Sbjct: 485 GKSKEAIDLFEKSLKVGFSPDSVTFISVLTACTHSGQLDLGFHYFNLMQEKYNMRPAKEH 544
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEE----KDLISWNTFIAACSHCADYEKG 286
++ L + + EAEK +I+E KD + W T + AC D E+G
Sbjct: 545 YGCMVDLLCRAGRLSEAEK---MIDEMSWKKDDVVWTTLLIACKAKGDIERG 593
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 193/559 (34%), Positives = 317/559 (56%), Gaps = 29/559 (5%)
Query: 30 KMGIQ-PDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLAL 88
KMG+ DV V + ++++ A+ G + ARKVFD + E+ +V W+ +IS + Q A+
Sbjct: 180 KMGLWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAV 239
Query: 89 EFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMY 145
E F P+ Y +S ISAC + S+ G Q+H+ +L+ G AS + V L+ MY
Sbjct: 240 ELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMY 299
Query: 146 MK--VGYSSD-ALLVYGEAFEPNLVSFNALIAGFVENQ-QPEKGFEVFKLMLRQGLLPDR 201
K +G + D A V+ + +++S+ ALI+G+V++ Q K +F ML + + P+
Sbjct: 300 AKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNH 359
Query: 202 FSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRL 261
+++ L+ C+ +D G +H +K S VGN ++++Y++ + EA + F
Sbjct: 360 ITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQ 419
Query: 262 IEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF-----TFASILAACAGL 316
+ E+ +I C ++ ++ DH + D TFAS+++A A +
Sbjct: 420 LYERSMI-------PC---------ITEGRDFPLDHRIVRMDVGISSSTFASLISAAASV 463
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
+ G+Q+HA ++ D V N+LV+MY++CG + + + FNE+ RNV+SW ++I
Sbjct: 464 GMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMI 523
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
+ A H AL LF M TG+KP+ VT+I +L+AC+H GLV+EG+ YF SM++ +G+
Sbjct: 524 SGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGL 583
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAK 496
P +EH+ C++DLL R+G + EA E+ + PL D +V TLL ACR ++ +GE AK
Sbjct: 584 IPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAK 643
Query: 497 QLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFT 556
+ L+P +PYVLLSNLYA G+W +VA R ++D+ L KE S +EV+ T +F
Sbjct: 644 NVVELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFR 703
Query: 557 VAEFSHSKIGEINYMLKTL 575
+ SH + +I L TL
Sbjct: 704 AGDTSHPRAQDIYGKLDTL 722
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 130/453 (28%), Positives = 227/453 (50%), Gaps = 23/453 (5%)
Query: 18 LQQGISLHAAVLKMGI-QPDVIVSNHVLNLYAKCGKMILARKVFDEMSE-RNLVSWSAMI 75
L+ G +LH +L+ + D +V+N +L LY++CG + AR VFD M R++VSW+AM
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123
Query: 76 SGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSL-KFG- 130
S + G +L +M LLPN Y +A AC + + + K G
Sbjct: 124 SCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGL 183
Query: 131 YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFK 190
+ + VG++LI M + G + A V+ E +V + LI+ +V+ + E+ E+F
Sbjct: 184 WGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFL 243
Query: 191 LMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN 250
L G PDR++ + + C+ +R G+ LH L ++ L S+ V ++ +Y+K N
Sbjct: 244 DFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSN 303
Query: 251 L---IGEAEKAFRLIEEKDLISWNTFIAACSHCADYE-KGLSVFKEMSNDHGVRPDDFTF 306
+ + A K F + + D+ISW I+ E K +++F EM N+ ++P+ T+
Sbjct: 304 IGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNE-SIKPNHITY 362
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
+SIL +CA ++ G+Q+HAH+I+ VGNALV+MYA+ G + + ++FN++
Sbjct: 363 SSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYE 422
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
R+++ T G L ++ + S TF L++A G++ +G+
Sbjct: 423 RSMIPCIT----------EGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQ- 471
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
++M G D L+ + R G L +A
Sbjct: 472 LHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDA 504
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 214/394 (54%), Gaps = 32/394 (8%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCG---KMILARKVF 60
++SS++ C++ +++ G+ LH+ L+MG+ D VS ++++YAK M A KVF
Sbjct: 256 TMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVF 315
Query: 61 DEMSERNLVSWSAMISGHHQAG-EHLLALEFFSQM---HLLPNEYIFASAISACAGIQSL 116
+ M + +++SW+A+ISG+ Q+G + + F +M + PN ++S + +CA I
Sbjct: 316 ERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDH 375
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G+Q+HA+ +K AS VGN+L+SMY + G +A V+ + +E ++I
Sbjct: 376 DSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYE------RSMIPCI 429
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
E + F + ++R + +FA + + L KG LH +++K S+
Sbjct: 430 TEG----RDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDR 485
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
FV N+++++YS+ + +A ++F ++++++ISW + I+ + E+ LS+F +M
Sbjct: 486 FVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILT 545
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQI-------HAHLIRMRLNQDVGVGNALVNMYA 349
GV+P+D T+ ++L+AC+ + V+ GK+ H + RM +V++ A
Sbjct: 546 -GVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYA------CMVDLLA 598
Query: 350 KCGLISCSYKLFNEM-LHRNVVSWNTIIAAHANH 382
+ G++ + + NEM L + + W T++ A +H
Sbjct: 599 RSGIVKEALEFINEMPLKADALVWKTLLGACRSH 632
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 160/337 (47%), Gaps = 11/337 (3%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
SS+L C+ G +HA V+K V N ++++YA+ G M AR+VF+++ E
Sbjct: 363 SSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYE 422
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAY 125
R+++ + G +H + +M + + FAS ISA A + L KGQQ+HA
Sbjct: 423 RSMI--PCITEGRDFPLDHRIV-----RMDVGISSSTFASLISAAASVGMLTKGQQLHAM 475
Query: 126 SLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKG 185
SLK G+ S FV NSL+SMY + GY DA + E + N++S+ ++I+G ++ E+
Sbjct: 476 SLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERA 535
Query: 186 FEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVGNTIMA 244
+F M+ G+ P+ ++ L CS +R+G + L ++
Sbjct: 536 LSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVD 595
Query: 245 LYSKFNLIGEA-EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
L ++ ++ EA E + + D + W T + AC + E G K + P
Sbjct: 596 LLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAP 655
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV 340
+ S L A AGL +I + + LN++ G+
Sbjct: 656 YVLLSNLYADAGL--WDEVARIRSAMRDNNLNKETGL 690
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ + +SL+ + L +G LHA LK G D VSN ++++Y++CG + A + F+
Sbjct: 450 SSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFN 509
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVK 118
E+ +RN++SW++MISG + G AL F M L PN+ + + +SAC+ + + +
Sbjct: 510 ELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVRE 569
Query: 119 GQQ 121
G++
Sbjct: 570 GKE 572
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 210/612 (34%), Positives = 323/612 (52%), Gaps = 65/612 (10%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLN-------LYAKCGKMILARKV 59
SLLH+C K LQ +HA ++K G+ +N+ L+ L + A V
Sbjct: 7 SLLHNC---KTLQSLRMIHAQMIKTGLHN----TNYALSKLIEFCVLSPHFDGLPYAISV 59
Query: 60 FDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSL 116
F+ + E NL+ W+ M GH + + + AL + M LLPN Y F + +CA ++
Sbjct: 60 FETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAF 119
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA--------------- 161
+GQQIH + LK GY +V SLISMY++ G DA V+ ++
Sbjct: 120 REGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGY 179
Query: 162 ------------FE----PNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA 205
F+ ++VS+NA+I+G+ E ++ E+FK M++ + PD +
Sbjct: 180 ASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMV 239
Query: 206 GGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIE-- 263
+ C+ S + G +H SN + N ++ LY K GE E A L E
Sbjct: 240 SVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIK---CGEVETACGLFEGL 296
Query: 264 -EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG 322
KD+ISWNT I +H Y++ L +F+EM G P+D T SIL ACA L +++ G
Sbjct: 297 SYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS-GESPNDVTMLSILPACAHLGAIEIG 355
Query: 323 KQIHAHLIRMRLNQDVGVGNA------LVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
+ IH + I RL GV NA L++MYAKCG I + ++F+ +L+R++ SWN +I
Sbjct: 356 RWIHVY-INKRLK---GVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMI 411
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
A H +A +F +M+ I+PD +TF+GLL+AC+H+G++ G F SM++ Y I
Sbjct: 412 FGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKI 471
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAK 496
+P +EH+ C+IDLLG +G EAEE + D ++ +LL AC++ +V +GE A+
Sbjct: 472 TPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQ 531
Query: 497 QLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFT 556
L ++P YVLLSN+YA+ G W +VA R +L D G+KK P S IE+ +F
Sbjct: 532 NLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFI 591
Query: 557 VAEFSHSKIGEI 568
+ + H + EI
Sbjct: 592 IGDKFHPRNREI 603
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 186/566 (32%), Positives = 317/566 (56%), Gaps = 9/566 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKC--GKMILARKVFDEMSE 65
+L C + L + +HA ++K + V+ ++L A M A +F ++ E
Sbjct: 30 ILEQCKTIRDLNE---IHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDE 86
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
+ +++ MI G A+ F +MH + P+E+ F + C+ +Q+L +G+QI
Sbjct: 87 PDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQI 146
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
HA +K G+ S FV N+LI MY G A V+ E E N+ ++N++ AG+ ++
Sbjct: 147 HALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNW 206
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E+ ++F ML + D + L C DL G ++ + L+ NP + ++
Sbjct: 207 EEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSL 266
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y+K + A + F ++ +D+++W+ I+ S + + L +F EM + + P+
Sbjct: 267 VDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKAN-IDPN 325
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+ T SIL++CA L +++ GK +H + + R+ V +G AL++ YAKCG + S ++F
Sbjct: 326 EITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFG 385
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+M +NV+SW +I A++ G AL+ F M ++P+ VTFIG+L+AC+HAGLV E
Sbjct: 386 KMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDE 445
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G F SM + +GI P IEH+ C++D+LGRAG + EA ++ K P+ + ++ TLL++C
Sbjct: 446 GRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASC 505
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
++ ++V IGE KQL L+PT + Y+LLSN+YAS G W D R +K+ G+KK P
Sbjct: 506 KVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPG 565
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEI 568
S+IE+ G +F + HS+ EI
Sbjct: 566 CSLIELDGVIHEFFAEDNVHSQSEEI 591
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 162/322 (50%), Gaps = 15/322 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+L C + L+ G ++ V + G++ + + ++++YAKCG++ AR++FD+M
Sbjct: 227 TLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQM 286
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
R++V+WSAMISG+ QA AL+ F +M ++ PNE S +S+CA + +L G+
Sbjct: 287 DRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGK 346
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H + K +G +L+ Y K G ++ V+G+ N++S+ LI G N
Sbjct: 347 WVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNG 406
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
Q +K E F LML + + P+ +F G L CS + + +G L + + +
Sbjct: 407 QGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLF-----VSMSRDFGIEP 461
Query: 241 TIMALYSKFNLIGEA---EKAFRLIE----EKDLISWNTFIAACSHCADYEKGLSVFKEM 293
I +++G A E+AF+ I+ + + + W T +A+C + E G K++
Sbjct: 462 RIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQL 521
Query: 294 SNDHGVRPDDFTFASILAACAG 315
D+ S + A G
Sbjct: 522 IILEPTHSGDYILLSNIYASVG 543
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 190/577 (32%), Positives = 319/577 (55%), Gaps = 10/577 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L + AL G +HA +K G + V V N ++N+YAKCG + A+ VF+ M
Sbjct: 203 TFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWM 262
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQ 120
R++VSW+ +++G L AL+ F + + +A+ I CA ++ L +
Sbjct: 263 ETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALAR 322
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG-EAFEPNLVSFNALIAGFVEN 179
Q+H+ LK G+ V +L Y K G +DAL ++ N+VS+ A+I+G ++N
Sbjct: 323 QLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQN 382
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+F M ++P+ F+++ L+ S + I H +K + P VG
Sbjct: 383 GDIPLAVVLFSRMREDRVMPNEFTYSAMLK---ASLSILPPQI-HAQVIKTNYQHIPSVG 438
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++A YSKF +A F++IE+KD+++W+ ++ + D E +F +M+ G+
Sbjct: 439 TALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAI-QGI 497
Query: 300 RPDDFTFASILAACA-GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+P++FT +S++ ACA A V G+Q HA I+ R + + V +ALV+MY++ G I +
Sbjct: 498 KPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQ 557
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+F R++VSWN++I+ +A H A++ F QM+A+GI+ D VTF+ ++ C H G
Sbjct: 558 IVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNG 617
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV EG+ YF+SM + + I+P +EH+ C++DL RAGKL E + P +V TL
Sbjct: 618 LVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTL 677
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L ACR+ ++V +G+ A +L L+P +S YVLLSN+YA+ G W + RK++ +K
Sbjct: 678 LGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVK 737
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KE S I+++ F + SH +I LK +
Sbjct: 738 KEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVI 774
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 220/465 (47%), Gaps = 16/465 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++S +L C G LH +K G + +V ++++Y KCG + +VF+
Sbjct: 101 TLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEG 160
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
M ++N+V+W+++++G A H + F +M + PN + FAS +SA A +L G
Sbjct: 161 MPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLG 220
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
Q++HA S+KFG S FV NSL++MY K G DA V+ ++VS+N L+AG N
Sbjct: 221 QRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLN 280
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ + ++F + ++A +++C+ L LH +K G
Sbjct: 281 ECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFH---LTG 337
Query: 240 NTIMALYSKFNLIGEAEKAFRLIE----EKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
N + AL ++ GE A + ++++SW I+ C D + +F M
Sbjct: 338 NVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMRE 397
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
D V P++FT++++L A + QIHA +I+ VG AL+ Y+K G
Sbjct: 398 DR-VMPNEFTYSAMLKASLSILP----PQIHAQVIKTNYQHIPSVGTALLASYSKFGSTE 452
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ +F + ++VV+W+ +++ HA A LF +M GIKP+ T ++ AC
Sbjct: 453 DALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACA 512
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
+ F+++ Y I + L+ + R G + A+
Sbjct: 513 CPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQ 557
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 180/365 (49%), Gaps = 9/365 (2%)
Query: 56 ARKVFDEMSERNL-VSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
AR DE+ R+ V + ++ + + G L+ FS +L + + + AC
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACR 110
Query: 112 GIQSLVKGQQIHAYSLKFGY--ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSF 169
+ V G+Q+H +K G+ +S G SL+ MYMK G + + V+ + N+V++
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVS-AGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTW 169
Query: 170 NALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK 229
+L+ G Q + +F M +G+ P+ F+FA L + L G +H +VK
Sbjct: 170 TSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK 229
Query: 230 CKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSV 289
S+ FV N++M +Y+K L+ +A+ F +E +D++SWNT +A + L +
Sbjct: 230 FGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQL 289
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
F E G + T+A+++ CA L + +Q+H+ +++ + V AL + Y+
Sbjct: 290 FHESRATMG-KMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYS 348
Query: 350 KCGLISCSYKLFNEML-HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
KCG ++ + +F+ RNVVSW II+ + A+ LF +M+ + P+ T+
Sbjct: 349 KCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYS 408
Query: 409 GLLTA 413
+L A
Sbjct: 409 AMLKA 413
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 158/312 (50%), Gaps = 10/312 (3%)
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
Y D + A N V F+ G V PE + F + R G+L D + + L+
Sbjct: 53 YPLDEIPRRDAAVGANRVLFDYARRGMV----PEV-LDQFSVARRGGVLVDSATLSCVLK 107
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPF-VGNTIMALYSKFNLIGEAEKAFRLIEEKDLI 268
C D G LHCL VKC + G +++ +Y K + E + F + +K+++
Sbjct: 108 ACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVV 167
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
+W + + C+H + + +++F M + G+ P+ FTFAS+L+A A ++ G+++HA
Sbjct: 168 TWTSLLTGCAHAQMHSEVMALFFRMRAE-GIWPNPFTFASVLSAVASQGALDLGQRVHAQ 226
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
++ V V N+L+NMYAKCGL+ + +FN M R++VSWNT++A + A
Sbjct: 227 SVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEA 286
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTAC-NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLI 447
L+LF + +AT K T+ ++ C N L + + ++ + ++ ++ T L
Sbjct: 287 LQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNV--MTALA 344
Query: 448 DLLGRAGKLLEA 459
D + G+L +A
Sbjct: 345 DAYSKCGELADA 356
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 182/537 (33%), Positives = 296/537 (55%), Gaps = 5/537 (0%)
Query: 24 LHAAVLKMGI-QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
LHA L++G+ P+V S +++ Y + G++ A +VFDEM ER++ +W+AM+SG +
Sbjct: 88 LHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNT 147
Query: 83 EHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
A+ +M + + +S + C + +H Y++K G + FV N
Sbjct: 148 RAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCN 207
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
+LI +Y K+G ++A V+G +LV++N++I+ + + E+F M+ G+ P
Sbjct: 208 ALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCP 267
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV-GNTIMALYSKFNLIGEAEKA 258
D + + D +HC + + + GN ++ +Y+K + I A+K
Sbjct: 268 DVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKV 327
Query: 259 FRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
F + ++D++SWNT I + + ++ +M N G++P TF S+L A + L
Sbjct: 328 FDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGG 387
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA 378
+Q G ++HA I+ LN DV V L+++YAKCG + + LF M R+ WN IIA
Sbjct: 388 LQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAG 447
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISP 438
H G AL LF QM+ IKPD VTF+ LL AC+HAGLV +G ++F+ M+ YGI P
Sbjct: 448 LGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVP 507
Query: 439 DIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQL 498
+H+TC++D+LGRAG+L EA E+ + P+ D V G LL ACR+ +V +G+ ++ L
Sbjct: 508 IAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNL 567
Query: 499 FHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKF 555
F L P YVL+SN+YA G W V R +++ L+K P +S +EV+G+ F
Sbjct: 568 FELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVF 624
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 116/460 (25%), Positives = 210/460 (45%), Gaps = 43/460 (9%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++SS+L C + +H +K G+ ++ V N ++++Y K G + A VF
Sbjct: 168 AVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFG 227
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
M+ R+LV+W+++IS + Q G+ A+E F M + P+ S SA A +
Sbjct: 228 GMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELG 287
Query: 119 GQQIHAYSLKFGYASISFV-GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+ +H Y + G+ + GN+++ MY K+ A V+ + ++VS+N LI G++
Sbjct: 288 AKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYM 347
Query: 178 ENQQPEKGFEVFKLMLR-QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
+N + ++ M +GL P + +F L S L++GM +H L++K L +
Sbjct: 348 QNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDV 407
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
+V ++ LY+K + EA F + + WN IA K LS+F +M +
Sbjct: 408 YVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQE 467
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
++PD TF S+LAAC+ V G+ + + +Y I+
Sbjct: 468 E-IKPDHVTFVSLLAACSHAGLVDQGRSFF---------------DLMQTVYGIVP-IAK 510
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
Y +ML R G + FE +++ IKPDS + LL AC
Sbjct: 511 HYTCMVDMLGR-----------------AGQLDEAFEFIQSMPIKPDSAVWGALLGACRI 553
Query: 417 AGLVKEGEAYFNSMEKTYGISPD-IEHFTCLIDLLGRAGK 455
G V+ G+ + + + + P+ + ++ + ++ + GK
Sbjct: 554 HGNVEMGKV---ASQNLFELDPENVGYYVLMSNMYAKIGK 590
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 117/242 (48%), Gaps = 20/242 (8%)
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLIS 355
H +RPD FTF ++ A G AS Q+HA +R+ L+ +V +LV+ Y + G ++
Sbjct: 63 HPLRPDSFTFPPLVRAAPGPAS---AAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVA 119
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+Y++F+EM R+V +WN +++ + A+ L +M G+ D+VT +L C
Sbjct: 120 EAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMC- 178
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDI--EHFTC--LIDLLGRAGKLLEAEEYTKKFPLGQD 471
V G+ + Y + + E F C LID+ G+ G L EA L +D
Sbjct: 179 ----VVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMAL-RD 233
Query: 472 PIVLGTLLSACRLRRDVVIGERLAKQLFH-LQPTTTSPYVL-LSNLYASDGMWGDVAGAR 529
+ +++SA V A +LFH + + P VL L +L ++ GD GA+
Sbjct: 234 LVTWNSIISANEQGGKVAA----AVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAK 289
Query: 530 KM 531
+
Sbjct: 290 SV 291
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 200/612 (32%), Positives = 320/612 (52%), Gaps = 52/612 (8%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C + +++ G S HA L G +V V N ++ +Y++C + ARKVFDEMS ++VSW
Sbjct: 137 CGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSW 196
Query: 72 SAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQQIHAYSL 127
+++I + + G+ +ALE FS+M P+ + + CA + + G+Q+H +++
Sbjct: 197 NSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAV 256
Query: 128 KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF----------- 176
FVGN L+ MY K G +A V+ ++VS+NA++AG+
Sbjct: 257 TSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVR 316
Query: 177 -VENQQPEK--------------------GFE---VFKLMLRQGLLPDRFSFAGGLEICS 212
E Q EK G+E V + ML G+ P+ + L C+
Sbjct: 317 LFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA 376
Query: 213 VSNDLRKGMILHCLTVKCKLE-------SNPFVGNTIMALYSKFNLIGEAEKAFRLI--E 263
L G +HC +K ++ V N ++ +Y+K + A F + +
Sbjct: 377 SVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPK 436
Query: 264 EKDLISWNTFIAACSHCADYEKGLSVFKEM-SNDHGVRPDDFTFASILAACAGLASVQHG 322
E+D+++W I S D K L + EM D RP+ FT + L ACA LA+++ G
Sbjct: 437 ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIG 496
Query: 323 KQIHAHLIRMRLNQ-DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN 381
KQIHA+ +R + N + V N L++MYAKCG IS + +F+ M+ +N V+W +++ +
Sbjct: 497 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGM 556
Query: 382 HRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIE 441
H G AL +F++M+ G K D VT + +L AC+H+G++ +G YFN M+ +G+SP E
Sbjct: 557 HGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPE 616
Query: 442 HFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHL 501
H+ CL+DLLGRAG+L A ++ P+ P+V LS CR+ V +GE A+++ L
Sbjct: 617 HYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITEL 676
Query: 502 QPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIE-VQGTFEKFTVAEF 560
Y LLSNLYA+ G W DV R +++ G+KK P S +E ++GT F V +
Sbjct: 677 ASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGT-TTFFVGDK 735
Query: 561 SHSKIGEINYML 572
+H EI +L
Sbjct: 736 THPHAKEIYQVL 747
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 229/498 (45%), Gaps = 52/498 (10%)
Query: 14 KTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM--SERNLVSW 71
K K + Q +H +L GI + +++H+++ Y G + A + S+ + W
Sbjct: 37 KCKTISQVKLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHW 95
Query: 72 SAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
+++I + G L F MH L P+ Y F AC I S+ G+ HA SL
Sbjct: 96 NSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLV 155
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
G+ S FVGN+L++MY + SDA V+ E ++VS+N++I + + +P+ E+
Sbjct: 156 TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEM 215
Query: 189 FKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYS 247
F M + G PD + L C+ G LHC V ++ N FVGN ++ +Y+
Sbjct: 216 FSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYA 275
Query: 248 KFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH---------- 297
K ++ EA F + KD++SWN +A S +E + +F++M +
Sbjct: 276 KCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSA 335
Query: 298 ------------------------GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR 333
G++P++ T S+L+ CA + ++ HGK+IH + I+
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395
Query: 334 LN-------QDVGVGNALVNMYAKCGLISCSYKLFNEM--LHRNVVSWNTIIAAHANHRL 384
++ + V N L++MYAKC + + +F+ + R+VV+W +I ++ H
Sbjct: 396 IDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455
Query: 385 GGSALKLFEQM--KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEH 442
AL+L +M + +P++ T L AC ++ G+ + + +
Sbjct: 456 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFV 515
Query: 443 FTCLIDLLGRAGKLLEAE 460
CLID+ + G + +A
Sbjct: 516 SNCLIDMYAKCGSISDAR 533
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 186/361 (51%), Gaps = 9/361 (2%)
Query: 114 QSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPN---LVSFN 170
+++ + + IH L FG +++ + LIS Y+ VG S A+ + F P+ + +N
Sbjct: 39 KTISQVKLIHQKLLSFGILTLNLTSH-LISTYISVGCLSHAVSLL-RRFPPSDAGVYHWN 96
Query: 171 ALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC 230
+LI + +N K +F LM PD ++F + C + +R G H L++
Sbjct: 97 SLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVT 156
Query: 231 KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVF 290
SN FVGN ++A+YS+ + +A K F + D++SWN+ I + + + L +F
Sbjct: 157 GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMF 216
Query: 291 KEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
M+N+ G RPD+ T ++L CA L + GKQ+H + + Q++ VGN LV+MYAK
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAK 276
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGL 410
CG++ + +F+ M ++VVSWN ++A ++ A++LFE+M+ IK D VT+
Sbjct: 277 CGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAA 336
Query: 411 LTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE---YTKKFP 467
++ GL E M + GI P+ ++ G L+ +E Y K+P
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSS-GIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395
Query: 468 L 468
+
Sbjct: 396 I 396
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/507 (22%), Positives = 213/507 (42%), Gaps = 96/507 (18%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L C+ G LH + + ++ V N ++++YAKCG M A VF M
Sbjct: 231 TLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM 290
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---------------------------- 95
S +++VSW+AM++G+ Q G A+ F +M
Sbjct: 291 SVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEAL 350
Query: 96 ----------LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKF-------GYASISFVG 138
+ PNE S +S CA + +L+ G++IH Y++K+ G+ + V
Sbjct: 351 GVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVI 410
Query: 139 NSLISMYMKVGYSSDALLVYG--EAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
N LI MY K A ++ E ++V++ +I G+ ++ K E+ M +
Sbjct: 411 NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470
Query: 197 L--LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP-FVGNTIMALYSKFNLIG 253
P+ F+ + L C+ LR G +H ++ + + P FV N ++ +Y+K I
Sbjct: 471 CQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSIS 530
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
+A F + K+ ++W + + E+ L +F EM G + D T +L AC
Sbjct: 531 DARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRI-GFKLDGVTLLVVLYAC 589
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGN----ALVNMYAKCGLISCSYKLFNEMLHRNV 369
+ + G + + RM+ V G LV++ + G ++
Sbjct: 590 SHSGMIDQGME---YFNRMKTVFGVSPGPEHYACLVDLLGRAGRLN-------------- 632
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNS 429
+AL+L E+M ++P V ++ L+ C G V+ GE +
Sbjct: 633 -----------------AALRLIEEMP---MEPPPVVWVAFLSCCRIHGKVELGEY---A 669
Query: 430 MEKTYGISPDIE-HFTCLIDLLGRAGK 455
EK ++ + + +T L +L AG+
Sbjct: 670 AEKITELASNHDGSYTLLSNLYANAGR 696
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 201/613 (32%), Positives = 328/613 (53%), Gaps = 43/613 (7%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCG----------- 51
K+ LL + L G SLHA +K + +SNH +NLY+KCG
Sbjct: 9 KTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYS 68
Query: 52 --------------------KMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFF 91
K+ +AR++FDE+ + + VS++ +ISG+ A E A+ F
Sbjct: 69 TEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLF 128
Query: 92 SQMHLLPNE---YIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKV 148
+M L E + + I+AC L+K Q+H +S+ G+ S S V N+ ++ Y K
Sbjct: 129 KRMRKLGFEVDGFTLSGLIAACCDRVDLIK--QLHCFSVSGGFDSYSSVNNAFVTYYSKG 186
Query: 149 GYSSDALLV-YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGG 207
G +A+ V YG + VS+N++I + ++++ K ++K M+ +G D F+ A
Sbjct: 187 GLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASV 246
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF---NLIGEAEKAFRLIEE 264
L + + L G H +K N VG+ ++ YSK + + ++EK F+ I
Sbjct: 247 LNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILS 306
Query: 265 KDLISWNTFIAACSHCADY-EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGK 323
DL+ WNT I+ S + E+ + F++M G RPDD +F + +AC+ L+S K
Sbjct: 307 PDLVVWNTMISGYSMNEELSEEAVKSFRQMQRI-GHRPDDCSFVCVTSACSNLSSPSQCK 365
Query: 324 QIHAHLIRMRLNQD-VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH 382
QIH I+ + + + V NAL+++Y K G + + +F+ M N VS+N +I +A H
Sbjct: 366 QIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQH 425
Query: 383 RLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEH 442
G AL L+++M +GI P+ +TF+ +L+AC H G V EG+ YFN+M++T+ I P+ EH
Sbjct: 426 GHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEH 485
Query: 443 FTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQ 502
++C+IDLLGRAGKL EAE + P + LL ACR +++ + ER A +L +Q
Sbjct: 486 YSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQ 545
Query: 503 PTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
P +PYV+L+N+YA W ++A RK ++ ++K+P S IEV+ F ++SH
Sbjct: 546 PLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSH 605
Query: 563 SKIGEINYMLKTL 575
I E+N L+ +
Sbjct: 606 PMIREVNEYLEEM 618
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 192/536 (35%), Positives = 297/536 (55%), Gaps = 15/536 (2%)
Query: 55 LARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
LA + + + N+ SW+++I+ + G+ + AL FS + L+P F I +C+
Sbjct: 1967 LATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCS 2026
Query: 112 GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNA 171
+ LV G+ H + FG+ + FV ++LI MY K G DA ++ E N+VS+ +
Sbjct: 2027 ALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTS 2086
Query: 172 LIAGFVENQQPEKGFEVFKLMLRQGL-------LP-DRFSFAGGLEICSVSNDLRKGMI- 222
+I G+V+N+Q + +FK L + +P D L CS + KG+
Sbjct: 2087 MITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSG--KGITE 2144
Query: 223 -LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
+H VK + + VGNT+M Y+K ++K F +EEKD ISWN+ IA +
Sbjct: 2145 GVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSG 2204
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
+ L VF M GVR + T +++L ACA +++ GK IH +I+M L +V VG
Sbjct: 2205 LSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVG 2264
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
++++MY KCG + + K F+ M +NV SW ++A + H AL +F +M G+K
Sbjct: 2265 TSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVK 2324
Query: 402 PDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
P+ +TF+ +L AC+HAGLV+EG +FN+M+ Y I P IEH+ C++DL GRAG L EA
Sbjct: 2325 PNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYN 2384
Query: 462 YTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGM 521
K+ + D +V G+LL ACR+ ++V +GE A++LF L P YVLLSNLYA G
Sbjct: 2385 LIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGR 2444
Query: 522 WGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
W DV R ++K+ L K P +S++E++G F V + H I L+ L+L
Sbjct: 2445 WADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTL 2500
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 192/376 (51%), Gaps = 30/376 (7%)
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+QIHA ++ G ++ + LI +Y G + A+L++ + P ++N +I N
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
E+ ++K M+ QG+ D+F+F ++ C+ + G ++H +K + FV
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N ++ Y K A K F + ++++SW T I+ C D ++ +F E+ + + V
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223
Query: 300 R------------------------------PDDFTFASILAACAGLASVQHGKQIHAHL 329
P+++T S++ AC + + G+ IH +
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
I+ + V +G AL++MY+KCG I + ++F M +++ +WN++I + H LG AL
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEAL 343
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
LF +M+ +KPD++TFIG+L AC H VKEG AYF M + YGI+P EH+ C+ +L
Sbjct: 344 NLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTEL 403
Query: 450 LGRAGKLLEAEEYTKK 465
R+ L EA + TK+
Sbjct: 404 YARSNNLDEAFKSTKE 419
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 214/431 (49%), Gaps = 33/431 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S + CS L G H G + D+ VS+ ++++Y+KCG++ AR +FDE+
Sbjct: 2017 SFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEI 2076
Query: 64 SERNLVSWSAMISGH---HQAGEHLLALEFFSQMHL-------LP-NEYIFASAISACAG 112
RN+VSW++MI+G+ QA LL + F + +P + + S +SAC+
Sbjct: 2077 PLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSR 2136
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
+ + +H + +K G+ VGN+L+ Y K G + V+ E + +S+N++
Sbjct: 2137 VSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSM 2196
Query: 173 IAGFVENQQPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK 231
IA + ++ + EVF M+R G+ + + + L C+ + LR G +H +K
Sbjct: 2197 IAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMD 2256
Query: 232 LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK 291
LE N VG +I+ +Y K + A+K F ++EK++ SW +A ++ L +F
Sbjct: 2257 LEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFY 2316
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR-MRLNQDVGVG----NALVN 346
+M GV+P+ TF S+LAAC+ V+ G H M+ D+ G +V+
Sbjct: 2317 KMVR-AGVKPNYITFVSVLAACSHAGLVEEG----WHWFNAMKHKYDIEPGIEHYGCMVD 2371
Query: 347 MYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGG-SALKLFEQMKATGIK 401
++ + G ++ +Y L M + + V W +++ A H N LG +A KLFE +
Sbjct: 2372 LFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFE------LD 2425
Query: 402 PDSVTFIGLLT 412
PD+ + LL+
Sbjct: 2426 PDNCGYYVLLS 2436
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 188/403 (46%), Gaps = 49/403 (12%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
AK LL +C K L+Q +HA +++ G+ D +++ +++LY+ G++ A +F
Sbjct: 27 AKKALFLLQNCKNFKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFY 83
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
++ +W+ +I + G AL + M + +++ F I AC S+
Sbjct: 84 QIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDL 143
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV--------------------- 157
G+ +H +K+G++ FV N+LI Y K G++ AL V
Sbjct: 144 GKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLIS 203
Query: 158 ----------YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGG 207
+ E N+VS+ A+I G++ NQQPE+ E+FK M + + P+ ++
Sbjct: 204 CGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSL 263
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDL 267
++ C+ L G +H +K +E ++G ++ +YSK I +A + F + K L
Sbjct: 264 IKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSL 323
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHA 327
+WN+ I + ++ L++F EM + V+PD TF +L AC + +V+ G A
Sbjct: 324 PTWNSMITSLGVHGLGQEALNLFSEMERVN-VKPDAITFIGVLCACVHIKNVKEG---CA 379
Query: 328 HLIRMRLNQDVGVG------NALVNMYAKCGLISCSYKLFNEM 364
+ RM Q G+ + +YA+ + ++K E+
Sbjct: 380 YFTRM--TQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 164/324 (50%), Gaps = 17/324 (5%)
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
+S+ A Y + N+ S+N++IA + F + + GL+P R SF ++
Sbjct: 1964 HSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIK 2023
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
CS DL G + H E++ FV + ++ +YSK + +A F I ++++S
Sbjct: 2024 SCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVS 2083
Query: 270 WNTFIAACSHCADYEKGLSVFK-------EMSNDHGVRPDDFTFASILAACAGLASVQHG 322
W + I + L +FK E+ + + V D S+L+AC+ ++
Sbjct: 2084 WTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGIT 2143
Query: 323 KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH 382
+ +H +++ + +GVGN L++ YAKCG S K+F+ M ++ +SWN++IA +A
Sbjct: 2144 EGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQS 2203
Query: 383 RLGGSALKLFEQM-KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIE 441
L G AL++F M + G++ ++VT +L AC HAG ++ G+ + + I D+E
Sbjct: 2204 GLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQV-----IKMDLE 2258
Query: 442 HFTC----LIDLLGRAGKLLEAEE 461
+ C +ID+ + G++ A++
Sbjct: 2259 YNVCVGTSIIDMYCKCGRVEMAKK 2282
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 100/183 (54%), Gaps = 13/183 (7%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++S++L C+ AL+ G +H V+KM ++ +V V ++++Y KCG++ +A+K FD
Sbjct: 2226 AVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFD 2285
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
M E+N+ SW+AM++G+ G AL+ F +M + PN F S ++AC+ + +
Sbjct: 2286 RMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEE 2345
Query: 119 GQQI-----HAYSLKFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNAL 172
G H Y ++ G I G ++ ++ + G ++A L+ +P+ V + +L
Sbjct: 2346 GWHWFNAMKHKYDIEPG---IEHYG-CMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSL 2401
Query: 173 IAG 175
+
Sbjct: 2402 LGA 2404
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
+H +QIHA +IR L+ D + L+++Y+ G I+ + LF ++ + +WN II A+
Sbjct: 41 KHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRAN 100
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
+ L AL L++ M GI D TF ++ AC + + G+ S+ K YG S D
Sbjct: 101 TINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIK-YGFSGD 159
Query: 440 IEHFTCLIDLLGRAG 454
+ LID + G
Sbjct: 160 VFVQNNLIDFYFKCG 174
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 191/560 (34%), Positives = 316/560 (56%), Gaps = 31/560 (5%)
Query: 30 KMGIQ-PDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLAL 88
KMG+ D+ V + ++++ A+ G + ARKVFD + E+ +V W+ +IS + Q A+
Sbjct: 180 KMGLWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAV 239
Query: 89 EFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMY 145
E F P+ Y +S ISAC + S+ G Q+H+ +L+ G+AS + V L+ MY
Sbjct: 240 EIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMY 299
Query: 146 MKVGYSSDALLVYGEAFEP----NLVSFNALIAGFVENQ-QPEKGFEVFKLMLRQGLLPD 200
K A+ + FE +++S+ ALI+G+V++ Q K +F ML + + P+
Sbjct: 300 AKSNIEQ-AMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPN 358
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+++ L+ C+ +D G +H +K + VGN ++++Y++ + EA + F
Sbjct: 359 HITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFN 418
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF-----TFASILAACAG 315
+ E+ +IS C ++ ++ DH + D TFAS+++A A
Sbjct: 419 QLYERSMIS----------C------ITEGRDAPLDHRIGRMDMGISSSTFASLISAAAS 462
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
+ + G+Q+HA ++ D V N+LV+MY++CG + + + FNE+ RNV+SW ++
Sbjct: 463 VGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSM 522
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYG 435
I+ A H AL LF M TG+KP+ VT+I +L+AC+H GLV+EG+ YF SM++ +G
Sbjct: 523 ISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHG 582
Query: 436 ISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLA 495
+ P +EH+ C++DLL R+G + EA E+ + PL D +V TLL ACR ++ +GE A
Sbjct: 583 LIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAA 642
Query: 496 KQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKF 555
K + L+P +PYVLLSNLYA G+W +VA R ++D+ L KE S +EV+ T +F
Sbjct: 643 KNVIELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEF 702
Query: 556 TVAEFSHSKIGEINYMLKTL 575
+ SH + +I L TL
Sbjct: 703 RAGDTSHPRAQDIYGKLDTL 722
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 229/454 (50%), Gaps = 25/454 (5%)
Query: 18 LQQGISLHAAVLKMGI-QPDVIVSNHVLNLYAKCGKMILARKVFDEMSE-RNLVSWSAMI 75
L+ G +LH +L+ + D +V+N +L LY++CG + AR VFD M R++VSW+AM
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123
Query: 76 SGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSL-KFG- 130
S + G E LL + + LLPN Y + AC + + + K G
Sbjct: 124 SCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGL 183
Query: 131 YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFK 190
+ + VG++LI M + G + A V+ E +V + LI+ +V+ + E+ E+F
Sbjct: 184 WGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFL 243
Query: 191 LMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN 250
L G PDR++ + + C+ +R G+ LH L ++ S+ V ++ +Y+K N
Sbjct: 244 DFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSN 303
Query: 251 L---IGEAEKAFRLIEEKDLISWNTFIAACSHCADYE-KGLSVFKEMSNDHGVRPDDFTF 306
+ + A K F + + D+ISW I+ E K + +F EM N+ ++P+ T+
Sbjct: 304 IEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNE-SIKPNHITY 362
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
+SIL ACA ++ G+Q+HAH+I+ VGNALV+MYA+ G + + ++FN++
Sbjct: 363 SSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYE 422
Query: 367 RNVVSWNTI-IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
R+++S T A +HR+G + + S TF L++A G++ +G+
Sbjct: 423 RSMISCITEGRDAPLDHRIGRMDMGI-----------SSSTFASLISAAASVGMLTKGQQ 471
Query: 426 YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
++M G D L+ + R G L +A
Sbjct: 472 -LHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDA 504
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 188/572 (32%), Positives = 315/572 (55%), Gaps = 6/572 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L C++ L G LHAA+LK G + + I N +L +Y KCG++ A +VF E+ E++
Sbjct: 272 VLQVCTELAQLNLGRELHAALLKSGSEVN-IQCNALLVMYTKCGRVDSALRVFREIDEKD 330
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
+SW++M+S + Q G + A+EF S+M P+ S SA + L+ G+++HA
Sbjct: 331 YISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHA 390
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
Y++K S + VGN+L+ MYMK Y + V+ + +S+ +I + ++ + +
Sbjct: 391 YAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIE 450
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
E+F+ ++G+ D LE CS + LHC ++ L + V N I+
Sbjct: 451 ALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGL-LDLVVKNRIID 509
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y + + + K F +E+KD+++W + I ++ + L +F EM + V+PD
Sbjct: 510 IYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTD-VQPDSV 568
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
SIL A GL+S+ GK++H LIR + + + ++LV+MY+ CG +S + K+FN +
Sbjct: 569 ALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAV 628
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+++V W +I A H G A+ LF++M TG+ PD V+F+ LL AC+H+ LV EG+
Sbjct: 629 KCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGK 688
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRL 484
Y + M TY + P EH+ C++DLLGR+G+ EA E+ K PL +V +LL ACR+
Sbjct: 689 CYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRV 748
Query: 485 RRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYS 544
++ + A +L L+P YVL+SN++A G W + R + + GL+K+P+ S
Sbjct: 749 HKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARISERGLRKDPACS 808
Query: 545 MIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
IE+ FT + SH IN L ++
Sbjct: 809 WIEIGNNVHTFTTRDNSHRDAERINLKLAEIT 840
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/410 (30%), Positives = 216/410 (52%), Gaps = 13/410 (3%)
Query: 16 KALQQGISLHAAVLKMGI--QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSA 73
KA+ QG+ +HA + G D ++ +L +Y KCG++ AR +FD MS R + SW+A
Sbjct: 72 KAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNA 131
Query: 74 MISGHHQAGEHLLALEFFSQMHL------LPNEYIFASAISACAGIQSLVK-GQQIHAYS 126
+I + +G AL + M L P+ AS + A +G++ + G ++H +
Sbjct: 132 LIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKA-SGVEGDGRCGCEVHGLA 190
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE-PNLVSFNALIAGFVENQQPEKG 185
+K G +FV N+LI+MY K G A+ V+ + ++ S+N++I+G ++N +
Sbjct: 191 VKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQA 250
Query: 186 FEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMAL 245
++F+ M R L + ++ G L++C+ L G LH +K E N N ++ +
Sbjct: 251 LDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVN-IQCNALLVM 309
Query: 246 YSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFT 305
Y+K + A + FR I+EKD ISWN+ ++ Y + + EM G +PD
Sbjct: 310 YTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRG-GFQPDHAC 368
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
S+ +A L + +GK++HA+ I+ RL+ D VGN L++MY KC I S +F+ M
Sbjct: 369 IVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMR 428
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
++ +SW TII +A AL++F + + GIK D + +L AC+
Sbjct: 429 IKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACS 478
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 123/256 (48%), Gaps = 20/256 (7%)
Query: 187 EVFKLMLRQ--GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC-KLESNP-FVGNTI 242
+ +L+ Q G P + + L++ + + +G+ +H V LE + F+ +
Sbjct: 42 QALRLLTSQTPGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKL 101
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM--SNDHGVR 300
+ +Y K + +A F + + + SWN I A + L V++ M S GV
Sbjct: 102 LFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVA 161
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD T AS+L A + G ++H ++ L++ V NAL+ MYAKCG++ + ++
Sbjct: 162 PDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRV 221
Query: 361 FNEMLH--RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN--- 415
F E++H R+V SWN++I+ + + AL LF M+ + +S T +G+L C
Sbjct: 222 F-ELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELA 280
Query: 416 --------HAGLVKEG 423
HA L+K G
Sbjct: 281 QLNLGRELHAALLKSG 296
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 6/194 (3%)
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM-RLNQDVG-VGNALVNMYAKC 351
S G P + +L A +V G Q+HAH + L D G + L+ MY KC
Sbjct: 49 SQTPGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKC 108
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK---ATGIKPDSVTFI 408
G ++ + LF+ M R V SWN +I A+ + AL ++ M+ A+G+ PD T
Sbjct: 109 GRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLA 168
Query: 409 GLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
+L A G + G + + +G+ LI + + G L A +
Sbjct: 169 SVLKASGVEGDGRCG-CEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHD 227
Query: 469 GQDPIVLGTLLSAC 482
G+D +++S C
Sbjct: 228 GRDVASWNSMISGC 241
>gi|224096616|ref|XP_002310672.1| predicted protein [Populus trichocarpa]
gi|222853575|gb|EEE91122.1| predicted protein [Populus trichocarpa]
Length = 551
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 304/542 (56%), Gaps = 5/542 (0%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
L C +TKA + G +H +L G ++ +S ++ Y+K G + ARKVFD M ER +
Sbjct: 4 LQLCIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTV 63
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAY 125
VSWSA ISG+ Q G + AL F M N++ + S + AC G++ L +G QI
Sbjct: 64 VSWSAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGC 123
Query: 126 SLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKG 185
K +AS V ++L+ ++ K G DA ++G E ++VS+NA+I +
Sbjct: 124 LEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDS 183
Query: 186 FEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMAL 245
F +F+ M+++G+ PD F+F L+ +++D+ + +H L ++ S+ + +++
Sbjct: 184 FRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLIDA 243
Query: 246 YSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYE-KGLSVFKEMSNDHGVRPDDF 304
Y+K + A ++ + KD+IS + + ++Y K L +FKE+ H ++ DD
Sbjct: 244 YAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMH-MKIDDV 302
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
S+ CA ++S+ G+QIHA ++ + DV +GNAL++MYAK G I + + FNEM
Sbjct: 303 ILCSMFNICANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEM 362
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+NV+SW ++I + +H G A+ LF++M+ G+KP+ +TF+ LL ACNH GL EG
Sbjct: 363 EEKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTGEGW 422
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRL 484
FN+M Y I P EHF+C++DL R G L EA K + + + G +L AC +
Sbjct: 423 ECFNNMISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAILGACYI 482
Query: 485 RRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYS 544
++ + E A LF + P + YV+L+++YA+ G W + RK++++ LKK P YS
Sbjct: 483 YGNMPLAEEAAIHLFKMDPENSVNYVVLADIYAAAGSWDNAWKMRKLMEERNLKKAPGYS 542
Query: 545 MI 546
I
Sbjct: 543 FI 544
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 190/378 (50%), Gaps = 7/378 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C+ + LQ+G+ + + K ++IV + +L+L++KCGKM A +F M ER
Sbjct: 103 SVLRACTGLRCLQRGMQIQGCLEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEER 162
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
++VSW+A+I + G + F M + P+ + F S + A +++ QIH
Sbjct: 163 DVVSWNAIIGAYAVQGFSGDSFRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIH 222
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ-P 182
++ GY S + SLI Y K + A +Y +++S AL+ G+ +
Sbjct: 223 QLIIQLGYGSHISLSGSLIDAYAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYS 282
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
K ++FK + + + D IC+ + L G +H L +KCK + +GN +
Sbjct: 283 SKALDLFKEIQQMHMKIDDVILCSMFNICANISSLSVGRQIHALALKCKPTYDVAMGNAL 342
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y+K I +A +AF +EEK++ISW + I + +++FK+M + G++P+
Sbjct: 343 IDMYAKSGEIKDANRAFNEMEEKNVISWTSLITGYGSHGHGHEAIALFKKMEYE-GLKPN 401
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLI-RMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D TF S+L AC G + ++I + + + +V+++A+ GL+ +Y L
Sbjct: 402 DITFLSLLFACNHCGLTGEGWECFNNMISKYNILPRAEHFSCMVDLFARGGLLEEAYNLI 461
Query: 362 NEM-LHRNVVSWNTIIAA 378
N+M + N W I+ A
Sbjct: 462 NKMNIKPNASLWGAILGA 479
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 174/360 (48%), Gaps = 9/360 (2%)
Query: 106 AISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPN 165
++ C ++ G IH L G+AS + LI Y K+G + A V+ E
Sbjct: 3 SLQLCIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERT 62
Query: 166 LVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHC 225
+VS++A I+G+ +N + VF MLR G ++F++ L C+ L++GM +
Sbjct: 63 VVSWSAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQG 122
Query: 226 LTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEK 285
K + SN V + ++ L+SK + +A F ++EE+D++SWN I A +
Sbjct: 123 CLEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGD 182
Query: 286 GLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALV 345
+F+ M + G+ PD FTF S+L A + V QIH +I++ + + +L+
Sbjct: 183 SFRMFRSMMQE-GMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLI 241
Query: 346 NMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA-NHRLGGSALKLFEQMKATGIKPDS 404
+ YAKC ++ ++ L+ M ++++S ++ +A + AL LF++++ +K D
Sbjct: 242 DAYAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDD 301
Query: 405 VTFIGLLTACNHAGLVKEGE---AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
V + C + + G A + TY D+ LID+ ++G++ +A
Sbjct: 302 VILCSMFNICANISSLSVGRQIHALALKCKPTY----DVAMGNALIDMYAKSGEIKDANR 357
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+ S+ + C+ +L G +HA LK DV + N ++++YAK G++ A + F+EM
Sbjct: 304 LCSMFNICANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEME 363
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISAC 110
E+N++SW+++I+G+ G A+ F +M L PN+ F S + AC
Sbjct: 364 EKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFAC 412
>gi|449523019|ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 193/582 (33%), Positives = 322/582 (55%), Gaps = 13/582 (2%)
Query: 4 SISSLL---HHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
+ISSLL + K QG + H + + G + V N +L+LYA+ M A K+F
Sbjct: 147 NISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEV-HMYFAYKLF 205
Query: 61 DEMSERN-LVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQS 115
EMS RN +VSWS MI G Q GE F M + P+ S + AC ++
Sbjct: 206 GEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKD 265
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
+ G +H + G FVGNSLI MY K A + E E N++S+N +++
Sbjct: 266 ISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSA 325
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
++ N+ + + M+R+G D + A L+I D K +H + ++ ESN
Sbjct: 326 YILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESN 385
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
+ N+++ Y+K NL+ A F + +KD+++W+T IA + ++ +SVFK+M+
Sbjct: 386 ELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQMNE 445
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
+ V P++ + +++ ACA A ++ K H +R L +V +G ++++MY+KCG I
Sbjct: 446 E--VIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVAIGTSIIDMYSKCGDIE 503
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
S + FN++ +NVV W+ +I+A + L AL LFE++K G KP++VT + LL+AC+
Sbjct: 504 ASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPNAVTALSLLSACS 563
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP--LGQDPI 473
H GL++EG ++F SM + +GI P +EH++C++D+L RAGK EA E +K P +
Sbjct: 564 HGGLIEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRAGKFNEALELIEKLPKEMEAGAS 623
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
+ GTLLS+CR ++ +G A ++ L+P +++ Y+L SNLYA+ G+ D A R++ K
Sbjct: 624 IWGTLLSSCRSYGNISLGSGAASRVLQLEPLSSAGYMLASNLYANCGLMIDSAKMRRLAK 683
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ G+K YS++ + +F + + + EI M+K L
Sbjct: 684 EKGVKVVAGYSLVHINSQTWRFVAGDVLNPRADEIYLMVKKL 725
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/485 (26%), Positives = 256/485 (52%), Gaps = 11/485 (2%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+ S+L CS T + G ++H ++K G Q ++N ++ Y K G + A++ FD
Sbjct: 51 LPSILKACSNT-SFNLGTAMHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTK 109
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQ---MHLLPNEYIFASAISACAGIQSLVKGQQ 121
++ VSW+ M+ G+ G + L +F + H PN I A ++ +G
Sbjct: 110 NKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFA 169
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGE-AFEPNLVSFNALIAGFVENQ 180
H Y + G+++I V NSL+S+Y +V + A ++GE + ++VS++ +I GFV+
Sbjct: 170 FHGYIFRSGFSAILSVQNSLLSLYAEV-HMYFAYKLFGEMSVRNDVVSWSVMIGGFVQIG 228
Query: 181 QPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ E+GF +F+ M+ + G+ PD + L+ C+ D+ G ++H L + LE + FVG
Sbjct: 229 EDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVG 288
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N+++ +YSK + A KAF+ I EK++ISWN ++A + + L++ M + G
Sbjct: 289 NSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVRE-GA 347
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
D+ T A++L + +H +IR + + N++++ YAKC L+ +
Sbjct: 348 EKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARM 407
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F+ M ++VV+W+T+IA A + A+ +F+QM I P++V+ + L+ AC +
Sbjct: 408 VFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQMNEEVI-PNNVSIMNLMEACAVSAE 466
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
+++ + + + + G++ ++ T +ID+ + G + + + P ++ + ++
Sbjct: 467 LRQSK-WAHGIAVRRGLASEVAIGTSIIDMYSKCGDIEASIRAFNQIP-QKNVVCWSAMI 524
Query: 480 SACRL 484
SA R+
Sbjct: 525 SAFRI 529
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 266 DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
DLIS I S+ ++++ L ++ E+ D + SIL AC+ S G +
Sbjct: 14 DLIS---KIKDASYSGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSN-TSFNLGTAM 69
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
H LI+ + N+ ++ Y K G + + + F+ +++ VSWN ++ H N G
Sbjct: 70 HGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMV--HGNFSNG 127
Query: 386 G--SALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
+ L F + + +P+ + + ++ A + +G A+
Sbjct: 128 SIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAF 170
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 191/560 (34%), Positives = 304/560 (54%), Gaps = 11/560 (1%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+HAA+L++G+ D + N VL G + ++ D+ E N+ ++ MI G
Sbjct: 29 IHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDC 88
Query: 84 HLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
++E + M L P+ + F + ACA + G ++H+ +K G + +FV S
Sbjct: 89 FQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKIS 148
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
LI++Y K G+ +A V+ + + N S+ A I+G+V + + ++F+ +L GL PD
Sbjct: 149 LINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPD 208
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
FS L C + DLR G + + + N FV ++ Y K + A F
Sbjct: 209 SFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFD 268
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ EK+++SW++ I + ++ L +F +M N+ G++PD + +L +CA L +++
Sbjct: 269 GMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNE-GLKPDCYAMVGVLCSCARLGALE 327
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G + + +G AL++MYAKCG + ++++F M ++ V WN I+ A
Sbjct: 328 LGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLA 387
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
AL LF QM+ +GIKPD TF+GLL AC HAGLV+EG YFNSME + ++P+I
Sbjct: 388 MSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEI 447
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH 500
EH+ C++DLLGRAG L EA + K P+ + IV G LL CRL RD + E + K+L
Sbjct: 448 EHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIA 507
Query: 501 LQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEF 560
L+P + YVLLSN+YA+ W + A R ++ + G+KK P YS IEV G +F V +
Sbjct: 508 LEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGDT 567
Query: 561 SH-------SKIGEINYMLK 573
SH +K+GE+ LK
Sbjct: 568 SHPLSEKIYAKLGELAKDLK 587
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 190/363 (52%), Gaps = 10/363 (2%)
Query: 107 ISACAGIQS-LVKG-------QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY 158
++ AGI++ L++G + IHA L+ G +++ N ++ G ++ + +
Sbjct: 6 VTKSAGIKNRLIQGFSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRIL 65
Query: 159 GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLR 218
+ EPN+ FN +I G V N ++ E++ M ++GL PD F+F L+ C+ D
Sbjct: 66 DQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSE 125
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
G+ +H L VK E++ FV +++ LY+K I A K F I +K+ SW I+
Sbjct: 126 LGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYV 185
Query: 279 HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
+ + +F+ + + G+RPD F+ +L+AC ++ G+ I ++ + ++V
Sbjct: 186 GVGKCREAIDMFRRLL-EMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNV 244
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
V ALV+ Y KCG + + +F+ ML +N+VSW+++I +A++ L AL LF +M
Sbjct: 245 FVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNE 304
Query: 399 GIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLE 458
G+KPD +G+L +C G ++ G+ N + + + T LID+ + G++
Sbjct: 305 GLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLG-TALIDMYAKCGRMDR 363
Query: 459 AEE 461
A E
Sbjct: 364 AWE 366
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 186/381 (48%), Gaps = 6/381 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L C++ + G+ +H+ V+K G + D V ++NLY KCG + A KVFD++ ++N
Sbjct: 114 VLKACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKN 173
Query: 68 LVSWSAMISGHHQAGEHLLALEFFS---QMHLLPNEYIFASAISACAGIQSLVKGQQIHA 124
SW+A ISG+ G+ A++ F +M L P+ + +SAC L G+ I
Sbjct: 174 FASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDE 233
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
Y + G FV +L+ Y K G A V+ E N+VS++++I G+ N P++
Sbjct: 234 YITENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKE 293
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
++F ML +GL PD ++ G L C+ L G L + N +G ++
Sbjct: 294 ALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALID 353
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y+K + A + FR + +KD + WN I+ + + L +F +M G++PD
Sbjct: 354 MYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKS-GIKPDRN 412
Query: 305 TFASILAACAGLASVQHGKQ-IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
TF +L AC V+ G++ ++ L ++ +V++ + G + +++L
Sbjct: 413 TFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKS 472
Query: 364 M-LHRNVVSWNTIIAAHANHR 383
M + N + W ++ HR
Sbjct: 473 MPMEANAIVWGALLGGCRLHR 493
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 133/280 (47%), Gaps = 7/280 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+ +L C +T L+ G + + + G+ +V V+ +++ Y KCG M AR VFD M
Sbjct: 211 SLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGM 270
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
E+N+VSWS+MI G+ G AL+ F +M L P+ Y + +CA + +L G
Sbjct: 271 LEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGD 330
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+ S +G +LI MY K G A V+ + + V +NA I+G +
Sbjct: 331 WASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSG 390
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ +F M + G+ PDR +F G L C+ + + +G + +++C P + +
Sbjct: 391 HVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGR-RYFNSMECVFTLTPEIEH 449
Query: 241 --TIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAAC 277
++ L + + EA + + + E + I W + C
Sbjct: 450 YGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGC 489
>gi|218194084|gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
Length = 656
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 185/597 (30%), Positives = 307/597 (51%), Gaps = 60/597 (10%)
Query: 35 PDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM 94
PDV++ LN K G++ A +FD M +N+V+W++++SG + G AL F+ M
Sbjct: 46 PDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADM 105
Query: 95 ---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
+ PN++ +A+ ACA + +L G+Q+H+ +++ G+A +++G+ LI MY + G
Sbjct: 106 VESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSL 165
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ---------------- 195
A V+ P++V + +LI+ F N + E E ML+Q
Sbjct: 166 PAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTAC 225
Query: 196 -------------------------------------GLLPDRFSFAGGLEICSVSNDLR 218
G+ P+ F+ + L C +
Sbjct: 226 PRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACG---SIG 282
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
G LHC +K L ++ V N ++++Y + L+ E E IE DL+SW T I+A
Sbjct: 283 LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANF 342
Query: 279 HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
EK +++ +M ++ G P+ + F+S+L++CA +AS+ G Q H +++ + ++
Sbjct: 343 QNGFGEKAIALLCQMHSE-GFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEI 401
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
GNAL+NMY+KCG + + F+ M +V SWN++I HA H AL++F +M++
Sbjct: 402 CTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSN 461
Query: 399 GIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLE 458
GIKPD TF+G+L CNH+G+V+EGE +F M Y +P H+ C+ID+LGR G+ E
Sbjct: 462 GIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDE 521
Query: 459 AEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYAS 518
A P D ++ TLL++C+L R++ IG+ A +L L ++ YVL+SN+YA
Sbjct: 522 ALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAM 581
Query: 519 DGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
G W D R+ + ++G+KK+ S IE+ F + SH I ML L
Sbjct: 582 HGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGEL 638
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 92/180 (51%), Gaps = 13/180 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+L C+ +L QG+ H LK+G ++ N ++N+Y+KCG+M AR FD M
Sbjct: 368 AFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVM 427
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
++ SW+++I GH Q G+ ALE FS+M + P++ F + C + +G+
Sbjct: 428 HTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGE 487
Query: 121 -----QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIA 174
I YS F A + +I M + G +AL ++ FEP+ + + L+A
Sbjct: 488 LFFRLMIDQYS--FTPAPSHYA--CMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLA 543
>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
Length = 1027
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 189/576 (32%), Positives = 319/576 (55%), Gaps = 7/576 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C+ + G +H +K + + V+N L++Y+K G + A+ +F + +
Sbjct: 431 SILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYK 490
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIH 123
+ +SW+A+ G Q E A+ +M L P++ F++AI+AC+ I++ G+QIH
Sbjct: 491 DSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIH 550
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
++K+G S VG+SLI +Y K G + ++ + ++V NALIAGFV+N +
Sbjct: 551 CLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNED 610
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK-LESNPFVGNTI 242
+ ++F+ +L+ GL P +F+ L CS S + G +HC T+K L + +G ++
Sbjct: 611 EAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSL 670
Query: 243 MALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+Y K ++ +A K + + K+L W I+ + + L F M + + VR
Sbjct: 671 AGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCN-VRS 729
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D+ TFAS+L AC+ + + GK+IH + + +AL++MY+KCG + S++ F
Sbjct: 730 DEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAF 789
Query: 362 NEMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
E+ ++ +++ WN++I A + AL LF++M+ IKPD VTF+G+L AC H+GL+
Sbjct: 790 KELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLI 849
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG +F M K YG++P ++H+ C IDLLGR G L EA+E + P D +V T L+
Sbjct: 850 SEGRHFFGPMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLA 909
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ +D G+ A++L L+P +S YVLLS+L+A+ G W + R+ +++ G+ K
Sbjct: 910 ACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKF 969
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
P S I V F V + H I ML L+
Sbjct: 970 PGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLT 1005
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/413 (33%), Positives = 237/413 (57%), Gaps = 4/413 (0%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
SS++ + Q+ ++L + + KMG PD + +++ A G++ A + +M
Sbjct: 228 SSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPT 287
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
+ V+W+A+ISGH Q+G L + M L P FAS +SA A +++ V+GQQ+
Sbjct: 288 PSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQM 347
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
HA ++ G + FVG+SLI++Y K G SDA V+ + E N+V +NA++ GFV+N+ P
Sbjct: 348 HAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELP 407
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E+ +F+ M+R L D F+F L C+ + G +HC+T+K ++ + FV N
Sbjct: 408 EEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANAT 467
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +YSK+ IG+A+ F LI KD ISWN + + E+ + + K M HG+ PD
Sbjct: 468 LDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRM-RLHGITPD 526
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
D +F++ + AC+ + + + GKQIH I+ + + VG++L+++Y+K G + S K+F
Sbjct: 527 DVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFA 586
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
++ ++V N +IA + A++LF+Q+ G+KP SVTF +L+ C+
Sbjct: 587 QVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS 639
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 137/481 (28%), Positives = 245/481 (50%), Gaps = 7/481 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L + KA +G +HAA + G+ +V V + ++NLYAKCG A+ VFD
Sbjct: 327 TFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLS 386
Query: 64 SERNLVSWSAMISGHHQ---AGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
E+N+V W+AM++G Q E + ++ + L +E+ F S + AC + S G+
Sbjct: 387 CEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGK 446
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H ++K FV N+ + MY K G DA ++ + +S+NAL G +N
Sbjct: 447 QVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNL 506
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ E+ + K M G+ PD SF+ + CS G +HCL +K + SN VG+
Sbjct: 507 EEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGS 566
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ LYSK + + K F ++ ++ N IA + ++ + +F+++ D G++
Sbjct: 567 SLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKD-GLK 625
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCSYK 359
P TF+SIL+ C+G + GKQ+H + ++ L D +G +L +Y K ++ + K
Sbjct: 626 PSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANK 685
Query: 360 LFNEML-HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
L EM H+N+ W II+ +A + G +L F +M+ ++ D TF +L AC+
Sbjct: 686 LLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVT 745
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
+G+ + K+ G + LID+ + G ++ + E K+ QD + ++
Sbjct: 746 AFADGKEIHGLITKS-GFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSM 804
Query: 479 L 479
+
Sbjct: 805 I 805
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 218/452 (48%), Gaps = 34/452 (7%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
++ +L CS+ L G +H V+K G V ++++YAKCG + AR+VFD ++
Sbjct: 161 LAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIA 220
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHA 124
+ + WS+MI+ +H+ G + AL FS+M
Sbjct: 221 CPDTICWSSMIACYHRVGCYQEALALFSRMD----------------------------- 251
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
K G A ++IS G A + + P+ V++NA+I+G ++
Sbjct: 252 ---KMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFN 308
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
++K M GL P R +FA L + +G +H V L++N FVG++++
Sbjct: 309 VLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLIN 368
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
LY+K +A+ F L EK+++ WN + E+ + +F+ M + ++ D+F
Sbjct: 369 LYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMR-YTLQTDEF 427
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
TF SIL AC L+S GKQ+H I+ ++ + V NA ++MY+K G I + LF+ +
Sbjct: 428 TFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI 487
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+++ +SWN + A + A+ + ++M+ GI PD V+F + AC++ + G+
Sbjct: 488 PYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGK 547
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+ + YGI + + LIDL + G +
Sbjct: 548 Q-IHCLAIKYGICSNHAVGSSLIDLYSKHGDV 578
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 138/336 (41%), Gaps = 38/336 (11%)
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ +H L+ G + +G+SL+ +Y K G A G A E + ++L++ +
Sbjct: 76 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135
Query: 180 QQPEKGFEVFK-LMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
P F+ + G PD+F A L CS L G +HC VK S+ F
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 195
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++ +Y+K + A + F I D I W++ IA Y++ L++F M + G
Sbjct: 196 EAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRM-DKMG 254
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
PD T +I++ A + H
Sbjct: 255 SAPDQVTLVTIISTLASSGRLDHAT----------------------------------- 279
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
L +M + V+WN +I+ HA L + L L++ M++ G+ P TF +L+A +
Sbjct: 280 ALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMK 339
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
EG+ ++ +G+ ++ + LI+L + G
Sbjct: 340 AFVEGQQ-MHAAAVMHGLDANVFVGSSLINLYAKCG 374
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 180/526 (34%), Positives = 294/526 (55%), Gaps = 11/526 (2%)
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKG 119
+ + N+ SW+++I+ ++G+ + AL FS M L PN F AI +C+ + L G
Sbjct: 112 VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 171
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q H +L FG+ FV ++L+ MY K G DA ++ E N+VS+ ++I G+V+N
Sbjct: 172 RQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQN 231
Query: 180 QQPEKGFEVFKLMLRQG--------LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK 231
+ +FK L + + D + L CS ++ +H +K
Sbjct: 232 DDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRG 291
Query: 232 LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK 291
E + V NT+M Y+K +G + + F + E+D+ISWN+ IA + + + +F
Sbjct: 292 FEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFH 351
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
M D + + T +++L ACA S + GK IH +I+M L +V VG ++++MY KC
Sbjct: 352 RMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKC 411
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
G + + K F+ M +NV SW+ ++A + H AL++F +M G+KP+ +TF+ +L
Sbjct: 412 GKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVL 471
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQD 471
AC+HAGL++EG +F +M + + P +EH+ C++DLLGRAG L EA + K L D
Sbjct: 472 AACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPD 531
Query: 472 PIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKM 531
+V G LL ACR+ ++V +GE A++LF L P YVLLSN+YA G W DV R +
Sbjct: 532 FVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRIL 591
Query: 532 LKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
+K+SGL K P +S+++++G F V + H + +I L+ LS+
Sbjct: 592 MKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSM 637
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 123/404 (30%), Positives = 203/404 (50%), Gaps = 27/404 (6%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
CS L G H L G +PD+ VS+ ++++Y+KCG++ AR +FDE+S RN+VSW
Sbjct: 162 CSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSW 221
Query: 72 SAMISGHHQAGEHLLALEFFSQM-----------HLLPNEYIFASAISACAGIQSLVKGQ 120
++MI+G+ Q + AL F + + + S +SAC+ + +
Sbjct: 222 TSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITE 281
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H + +K G+ V N+L+ Y K G + V+ E +++S+N++IA + +N
Sbjct: 282 GVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNG 341
Query: 181 QPEKGFEVFKLMLRQGLLP-DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ E+F M++ G + + + + L C+ S R G +H +K LESN FVG
Sbjct: 342 MSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVG 401
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+I+ +Y K + A KAF + EK++ SW+ +A ++ L VF EM N GV
Sbjct: 402 TSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEM-NMAGV 460
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIR-MRLNQDVGVG----NALVNMYAKCGLI 354
+P+ TF S+LAAC+ ++ G H + M DV G +V++ + G +
Sbjct: 461 KPNYITFVSVLAACSHAGLLEEG----WHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYL 516
Query: 355 SCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGG-SALKLFE 393
++ L M L + V W ++ A H N LG SA KLFE
Sbjct: 517 KEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFE 560
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 150/288 (52%), Gaps = 22/288 (7%)
Query: 4 SISSLLHHCSKT--KALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
++ S+L CS+ K++ +G+ H ++K G + D+ V N +++ YAKCG++ ++R+VFD
Sbjct: 263 AMVSVLSACSRVSEKSITEGV--HGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFD 320
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLV 117
M+ER+++SW+++I+ + Q G ++E F +M + N ++ + ACA S
Sbjct: 321 GMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQR 380
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+ IH +K G S FVG S+I MY K G A + E N+ S++A++AG+
Sbjct: 381 LGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYG 440
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ ++ EVF M G+ P+ +F L CS + L +G H K S+ F
Sbjct: 441 MHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEG--WHWF----KAMSHEF 494
Query: 238 VGNTIMALYS-KFNLIGEA---EKAFRLIE----EKDLISWNTFIAAC 277
+ Y +L+G A ++AF LI+ D + W + AC
Sbjct: 495 DVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGAC 542
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 98/179 (54%), Gaps = 5/179 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++S++L C+ + + + G +H V+KMG++ +V V ++++Y KCGK+ +ARK FD
Sbjct: 363 AVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFD 422
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVK 118
M E+N+ SWSAM++G+ G ALE F +M++ PN F S ++AC+ L +
Sbjct: 423 RMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEE 482
Query: 119 G-QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIAG 175
G A S +F ++ + + GY +A L+ G P+ V + AL+
Sbjct: 483 GWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGA 541
>gi|224106429|ref|XP_002314162.1| predicted protein [Populus trichocarpa]
gi|222850570|gb|EEE88117.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 309/545 (56%), Gaps = 6/545 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
++ ++ C+K+ + GI H+ +LK+G +V + + V+++YAKCG++ AR +FD+M
Sbjct: 72 LNKIVSFCAKSGSFHLGIQAHSTILKLGFISNVYICSAVVDMYAKCGEISSARVLFDQMP 131
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
+R +V+W+++I G+ +A+E F +M + + + +S ++ C+ +++ G Q
Sbjct: 132 QRTVVTWNSLIYGYLAVNCPKIAIELFIKMLKAAINVSAFSVSSCLAGCSQLEAREVGTQ 191
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H LK G VG SL+ MY K G D+ LV+ N++++ +++ G+ + ++
Sbjct: 192 VHGLILKTGLGYNVVVGTSLVDMYSKCGDVDDSRLVFDHMVNRNVITWTSMVTGYSQIEK 251
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
P++ + K M+ Q L P+ ++ L S + L + +HC ++ LESN ++ T
Sbjct: 252 PDEAMALVKEMVLQDLRPNCVTYNSLLSSFSGPDCLSYCLQVHCCIIQLGLESNVYIAAT 311
Query: 242 IMALYSKFNL-IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +YSK + + + +K ++ D I+WN IA S +E+ L F EM G+
Sbjct: 312 LVTVYSKCSSSLEDFKKVCSVVMTCDNIAWNAVIAGYSKLGRHEEALRCFHEM-KQAGID 370
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D +T S++ A + ++ GK +HA + R + V N LV+MYA+CG I S ++
Sbjct: 371 IDSYTLTSVVGAIGNSSFLEEGKAMHALIHRTGYISHLNVQNGLVSMYARCGAIGDSKRV 430
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F M +V+SWN ++ A A+H G A++LFEQM+ T IKP+S TF+ +L AC+H G V
Sbjct: 431 FWFMEEHDVISWNALLTAFAHHGYGREAVELFEQMRKTEIKPNSSTFLAVLCACSHVGFV 490
Query: 421 KEGEAYFNSMEKTYGISP-DIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
+G YF++M+ + P +EH+ L+D GRAG L EAE + P+ P V LL
Sbjct: 491 DKGIEYFDTMKSDILLEPLKVEHYASLVDTFGRAGYLNEAEAFINSMPIVPAPSVYKALL 550
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
SA + + I R AK+L L P + YVLLS++ DG W D A RK++ D GL+K
Sbjct: 551 SASLVHGNREIAARSAKKLLELWPNDPATYVLLSSVLTVDGNWDDAADLRKLMCDRGLRK 610
Query: 540 EPSYS 544
+P YS
Sbjct: 611 KPGYS 615
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 194/369 (52%), Gaps = 7/369 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A S+SS L CS+ +A + G +H +LK G+ +V+V ++++Y+KCG + +R VFD
Sbjct: 170 AFSVSSCLAGCSQLEAREVGTQVHGLILKTGLGYNVVVGTSLVDMYSKCGDVDDSRLVFD 229
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
M RN+++W++M++G+ Q + A+ +M L PN + S +S+ +G L
Sbjct: 230 HMVNRNVITWTSMVTGYSQIEKPDEAMALVKEMVLQDLRPNCVTYNSLLSSFSGPDCLSY 289
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYS-SDALLVYGEAFEPNLVSFNALIAGFV 177
Q+H ++ G S ++ +L+++Y K S D V + +++NA+IAG+
Sbjct: 290 CLQVHCCIIQLGLESNVYIAATLVTVYSKCSSSLEDFKKVCSVVMTCDNIAWNAVIAGYS 349
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ + E+ F M + G+ D ++ + S+ L +G +H L + S+
Sbjct: 350 KLGRHEEALRCFHEMKQAGIDIDSYTLTSVVGAIGNSSFLEEGKAMHALIHRTGYISHLN 409
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N ++++Y++ IG++++ F +EE D+ISWN + A +H + + +F++M
Sbjct: 410 VQNGLVSMYARCGAIGDSKRVFWFMEEHDVISWNALLTAFAHHGYGREAVELFEQMRKTE 469
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN--ALVNMYAKCGLIS 355
++P+ TF ++L AC+ + V G + + L + + V + +LV+ + + G ++
Sbjct: 470 -IKPNSSTFLAVLCACSHVGFVDKGIEYFDTMKSDILLEPLKVEHYASLVDTFGRAGYLN 528
Query: 356 CSYKLFNEM 364
+ N M
Sbjct: 529 EAEAFINSM 537
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 180/351 (51%), Gaps = 8/351 (2%)
Query: 91 FSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGY 150
F++ L N Y +S CA S G Q H+ LK G+ S ++ ++++ MY K G
Sbjct: 60 FTRHGSLSNPYFLNKIVSFCAKSGSFHLGIQAHSTILKLGFISNVYICSAVVDMYAKCGE 119
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
S A +++ + + +V++N+LI G++ P+ E+F ML+ + FS + L
Sbjct: 120 ISSARVLFDQMPQRTVVTWNSLIYGYLAVNCPKIAIELFIKMLKAAINVSAFSVSSCLAG 179
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
CS G +H L +K L N VG +++ +YSK + ++ F + +++I+W
Sbjct: 180 CSQLEAREVGTQVHGLILKTGLGYNVVVGTSLVDMYSKCGDVDDSRLVFDHMVNRNVITW 239
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
+ + S ++ +++ KEM +RP+ T+ S+L++ +G + + Q+H +I
Sbjct: 240 TSMVTGYSQIEKPDEAMALVKEMVL-QDLRPNCVTYNSLLSSFSGPDCLSYCLQVHCCII 298
Query: 331 RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE----MLHRNVVSWNTIIAAHANHRLGG 386
++ L +V + LV +Y+KC S S + F + ++ + ++WN +IA ++
Sbjct: 299 QLGLESNVYIAATLVTVYSKC---SSSLEDFKKVCSVVMTCDNIAWNAVIAGYSKLGRHE 355
Query: 387 SALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
AL+ F +MK GI DS T ++ A ++ ++EG+A + +T IS
Sbjct: 356 EALRCFHEMKQAGIDIDSYTLTSVVGAIGNSSFLEEGKAMHALIHRTGYIS 406
>gi|413944103|gb|AFW76752.1| hypothetical protein ZEAMMB73_846363 [Zea mays]
Length = 562
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 185/547 (33%), Positives = 306/547 (55%), Gaps = 7/547 (1%)
Query: 6 SSLLHHCSKTKALQQGISLH--AAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
SSLL A +QG S+H A + PD+ ++ ++ Y+ G + AR+VFD M
Sbjct: 15 SSLLQSSMGANAFRQGKSVHHRAIITSSASPPDLHLNTKLVIFYSHFGDVAAARRVFDGM 74
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
R++VSW+AM+SG+ + AL+ F+ M PN++ F SA+ AC G + G+
Sbjct: 75 PHRSVVSWTAMVSGYAKNSRPQEALDLFAFMLRSGARPNQFTFGSAVRACTGARCARSGE 134
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIHA + K +A FV ++L+ M+++ G DA ++ E +LVS+N+L+ GFVE +
Sbjct: 135 QIHACAAKGRFAGDMFVQSALMDMHLRCGSVGDARRLFAEMERKDLVSWNSLMRGFVERE 194
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+F MLR G+LPD F+F L+ C + L ++H +K
Sbjct: 195 HCNDALGLFDSMLRDGMLPDHFTFGSALKACGAISVLFNVELIHACIIKLGYWDENVAIA 254
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY-EKGLSVFKEMSNDHGV 299
+++ Y+K + A + + E DL+S I+ S +Y + + +F ++ + G+
Sbjct: 255 SLIDSYAKCRSLSSARVIYDSMCEPDLVSSTALISGYSMDRNYSDDAMKLFCKI-HRKGL 313
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
R D +S+L CA +AS++ G QIHA++ + + D+ + NALV+MYAK G S +
Sbjct: 314 RIDAILLSSLLGVCANVASIKFGTQIHAYMHKKQPMGDLALDNALVDMYAKSGEFLDSRR 373
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
F+EM +RNV+SW ++I + A H G A+ LF +M+ G+KP+ VTF+ LL+AC+H+G+
Sbjct: 374 AFDEMPNRNVISWTSLITSCAQHGFGEDAVTLFARMEEDGVKPNDVTFLSLLSACSHSGM 433
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
+ +G YF SM YGI P +H++ +DLL R G+L +A + + GT+L
Sbjct: 434 MNKGMEYFTSMMSKYGIDPRFKHYSSAVDLLARGGQLEDAWMLVQNTNTECKSSMYGTML 493
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
AC++ ++ +GE AK L + P ++ Y +L+N+YA +W D RK+L ++ K
Sbjct: 494 GACKVHGNMPLGETAAKNLLSIDPESSVNYAVLANMYAESHLWEDAQRTRKLLVETSKGK 553
Query: 540 EPSYSMI 546
E +S+I
Sbjct: 554 EAGFSVI 560
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 164/315 (52%), Gaps = 5/315 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S + C+ + + G +HA K D+ V + +++++ +CG + AR++F EM
Sbjct: 116 TFGSAVRACTGARCARSGEQIHACAAKGRFAGDMFVQSALMDMHLRCGSVGDARRLFAEM 175
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
++LVSW++++ G + AL F M +LP+ + F SA+ AC I L +
Sbjct: 176 ERKDLVSWNSLMRGFVEREHCNDALGLFDSMLRDGMLPDHFTFGSALKACGAISVLFNVE 235
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF-VEN 179
IHA +K GY + SLI Y K S A ++Y EP+LVS ALI+G+ ++
Sbjct: 236 LIHACIIKLGYWDENVAIASLIDSYAKCRSLSSARVIYDSMCEPDLVSSTALISGYSMDR 295
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ ++F + R+GL D + L +C+ ++ G +H K + + +
Sbjct: 296 NYSDDAMKLFCKIHRKGLRIDAILLSSLLGVCANVASIKFGTQIHAYMHKKQPMGDLALD 355
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N ++ +Y+K ++ +AF + +++ISW + I +C+ E +++F M D GV
Sbjct: 356 NALVDMYAKSGEFLDSRRAFDEMPNRNVISWTSLITSCAQHGFGEDAVTLFARMEED-GV 414
Query: 300 RPDDFTFASILAACA 314
+P+D TF S+L+AC+
Sbjct: 415 KPNDVTFLSLLSACS 429
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 71/120 (59%), Gaps = 3/120 (2%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+SSLL C+ +++ G +HA + K D+ + N ++++YAK G+ + +R+ FDEM
Sbjct: 320 LSSLLGVCANVASIKFGTQIHAYMHKKQPMGDLALDNALVDMYAKSGEFLDSRRAFDEMP 379
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQ 121
RN++SW+++I+ Q G A+ F++M + PN+ F S +SAC+ + KG +
Sbjct: 380 NRNVISWTSLITSCAQHGFGEDAVTLFARMEEDGVKPNDVTFLSLLSACSHSGMMNKGME 439
>gi|225427607|ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
mitochondrial [Vitis vinifera]
Length = 828
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 301/542 (55%), Gaps = 9/542 (1%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C++ L++G ++H L+ + D V+N ++++Y+KC + A VF + ER+LVSW
Sbjct: 288 CAELMLLREGRAVHGLTLRREMGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSW 347
Query: 72 SAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAIS---ACAGIQSLVKGQQIHAYSLK 128
+AMISG+ Q G A F Q+ ++ ++ ++ +C + L G+ IH + LK
Sbjct: 348 NAMISGYSQNGHSREAQHLFRQLLQSYSQCSLSTLLAILPSCDSSEFLQFGESIHCWQLK 407
Query: 129 FGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIAGFVENQQPEKGFE 187
G+A+ NSL+ MY+ G L+ + ++V +N ++AG +N + +
Sbjct: 408 LGFANNPLAVNSLMLMYINCGDLVACFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEALK 467
Query: 188 VFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
F LM + + D + + C L G LH L +K +ES+ V N ++ +Y
Sbjct: 468 AFNLMRQDPDVCHDSVALFNVISACGNLELLFAGGSLHGLALKTLMESDIRVQNALITMY 527
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
+ I A F ++L SWN I+A S D + L +F + P++ T
Sbjct: 528 GRCGEIENARIIFGFSCNRNLCSWNCMISAFSQNKDGRRALELFCHIE----FEPNEITI 583
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
IL+AC L ++HGKQIH H+IR RL + V AL +MY+ CG + ++++F
Sbjct: 584 VGILSACTQLGVLRHGKQIHGHVIRSRLQGNSFVSAALEDMYSNCGRLDTAFQIFQSSPE 643
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
R+V +WN++I+A H GG A++LF +M+ G +P TFI LL+AC+H+GLV EG Y
Sbjct: 644 RSVAAWNSMISAFGFHSNGGKAIELFHEMRECGTRPTKSTFISLLSACSHSGLVNEGLWY 703
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRR 486
+++M + + + D EH C++D+LGRAG+L EA E+ ++ P +P V G LLSAC
Sbjct: 704 YSNMLELFNVEADTEHHVCMVDMLGRAGRLGEAYEFIRQMPTQPEPGVWGALLSACSYHG 763
Query: 487 DVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMI 546
D+ +G +A+ LF L+P Y+ LSN+Y + G W D R++++D GLKK +YS+I
Sbjct: 764 DLKMGREVAELLFELEPENVGYYISLSNMYVAAGRWKDAVELRRIIQDKGLKKPAAYSLI 823
Query: 547 EV 548
+V
Sbjct: 824 DV 825
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 135/493 (27%), Positives = 237/493 (48%), Gaps = 14/493 (2%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L QG LH K G+ D + N ++++YAKCG++ + VF M R+++SW++M+ G
Sbjct: 89 LTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSECVFGGMEYRDIISWNSMMRG 148
Query: 78 HHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
+L +F +M + A+SA A + L GQ IH + +K GY I
Sbjct: 149 CAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLGELSFGQVIHGWGIKLGYKDI 208
Query: 135 SF--VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM 192
S NSLIS+Y + A +++ E ++VS+NA++ G NQ+ + F++ M
Sbjct: 209 SHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVSWNAMLDGLALNQRIWEAFDLLHEM 268
Query: 193 LRQGLL-PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
G + PD + + +C+ LR+G +H LT++ ++ + V N+++ +YSK
Sbjct: 269 QLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRREMGLDFSVTNSLIDMYSKCKD 328
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ AE F+ I E+DL+SWN I+ S + +F+++ + + T +IL
Sbjct: 329 VKRAEHVFKAIPERDLVSWNAMISGYSQNGHSREAQHLFRQLLQSYS-QCSLSTLLAILP 387
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG-LISCSYKLFNEMLHRNVV 370
+C +Q G+ IH +++ + N+L+ MY CG L++C L ++V
Sbjct: 388 SCDSSEFLQFGESIHCWQLKLGFANNPLAVNSLMLMYINCGDLVACFSLLQTVSAAADIV 447
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKAT-GIKPDSVTFIGLLTACNHAGLVKEGEAYFNS 429
WNT++A + ALK F M+ + DSV +++AC + L+ G +
Sbjct: 448 CWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFNVISACGNLELLFAGGSLHGL 507
Query: 430 MEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVV 489
KT + DI LI + GR G+ +E F ++ ++SA +D
Sbjct: 508 ALKTL-MESDIRVQNALITMYGRCGE-IENARIIFGFSCNRNLCSWNCMISAFSQNKD-- 563
Query: 490 IGERLAKQLFHLQ 502
G R + H++
Sbjct: 564 -GRRALELFCHIE 575
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 216/458 (47%), Gaps = 8/458 (1%)
Query: 31 MGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEF 90
MG + S +L Y++ + +FDE+ R+++ W+AMI+ + +A+
Sbjct: 1 MGALAHLPTSTSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNL 60
Query: 91 FSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMK 147
F ++ + + +SA + + +L +G+ +H S K G S SF+ N+LI MY K
Sbjct: 61 FVELMGEGVGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAK 120
Query: 148 VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGG 207
G S + V+G +++S+N+++ G N P+K FK M D S
Sbjct: 121 CGELSSSECVFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCA 180
Query: 208 LEICSVSNDLRKGMILHCLTVKC---KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE 264
+ ++ +L G ++H +K + N F N++++LYS+ I AE F+ ++
Sbjct: 181 VSASALLGELSFGQVIHGWGIKLGYKDISHNSF-ENSLISLYSQCRDIQAAEILFKEMKY 239
Query: 265 KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ 324
KD++SWN + + + + EM V+PD T I+ CA L ++ G+
Sbjct: 240 KDIVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRA 299
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
+H +R + D V N+L++MY+KC + + +F + R++VSWN +I+ ++ +
Sbjct: 300 VHGLTLRREMGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQNGH 359
Query: 385 GGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFT 444
A LF Q+ + + T + +L +C+ + ++ GE+ + + G + +
Sbjct: 360 SREAQHLFRQLLQSYSQCSLSTLLAILPSCDSSEFLQFGES-IHCWQLKLGFANNPLAVN 418
Query: 445 CLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
L+ + G L+ + D + T+++ C
Sbjct: 419 SLMLMYINCGDLVACFSLLQTVSAAADIVCWNTVMAGC 456
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 197/404 (48%), Gaps = 14/404 (3%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS-E 65
++L C ++ LQ G S+H LK+G + + N ++ +Y CG ++ + +S
Sbjct: 384 AILPSCDSSEFLQFGESIHCWQLKLGFANNPLAVNSLMLMYINCGDLVACFSLLQTVSAA 443
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP----NEYIFASAISACAGIQSLVKGQQ 121
++V W+ +++G Q G AL+ F+ M P + + ISAC ++ L G
Sbjct: 444 ADIVCWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFNVISACGNLELLFAGGS 503
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H +LK S V N+LI+MY + G +A +++G + NL S+N +I+ F +N+
Sbjct: 504 LHGLALKTLMESDIRVQNALITMYGRCGEIENARIIFGFSCNRNLCSWNCMISAFSQNKD 563
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ E+F + + P+ + G L C+ LR G +H ++ +L+ N FV
Sbjct: 564 GRRALELFCHIEFE---PNEITIVGILSACTQLGVLRHGKQIHGHVIRSRLQGNSFVSAA 620
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+ +YS + A + F+ E+ + +WN+ I+A ++ K + +F EM + G RP
Sbjct: 621 LEDMYSNCGRLDTAFQIFQSSPERSVAAWNSMISAFGFHSNGGKAIELFHEM-RECGTRP 679
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKCGLISCSYKL 360
TF S+L+AC+ V G +++++ + + D +V+M + G + +Y+
Sbjct: 680 TKSTFISLLSACSHSGLVNEGLWYYSNMLELFNVEADTEHHVCMVDMLGRAGRLGEAYEF 739
Query: 361 FNEM-LHRNVVSWNTIIAA---HANHRLGGSALKLFEQMKATGI 400
+M W +++A H + ++G +L +++ +
Sbjct: 740 IRQMPTQPEPGVWGALLSACSYHGDLKMGREVAELLFELEPENV 783
>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Glycine max]
Length = 887
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 188/538 (34%), Positives = 297/538 (55%), Gaps = 5/538 (0%)
Query: 13 SKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWS 72
++T+ L++G +H L++G+ D++V+ ++++YAKCG++ A++ F + R+LV WS
Sbjct: 339 TETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWS 398
Query: 73 AMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKF 129
A +S QAG AL F +M L P++ I +S +SACA I S G+ +H Y +K
Sbjct: 399 AFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKA 458
Query: 130 GYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVF 189
S V +L+SMY + A+ ++ ++V++N LI GF + P E+F
Sbjct: 459 DMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMF 518
Query: 190 KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF 249
+ G+ PD + L C++ +DL G+ H +K +ES V ++ +Y+K
Sbjct: 519 LRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKC 578
Query: 250 NLIGEAEKAFRLIEE-KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
+ AE F L + KD +SWN IA H + +S F +M + VRP+ TF +
Sbjct: 579 GSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKLE-SVRPNLVTFVT 637
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
IL A + L+ ++ HA +IRM +GN+L++MYAK G +S S K F+EM ++
Sbjct: 638 ILPAVSYLSILREAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKG 697
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
+SWN +++ +A H G AL LF M+ T + DSV++I +L+AC HAGL++EG F
Sbjct: 698 TISWNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRNIFQ 757
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDV 488
SM + + + P +EH+ C++DLLG AG E K P D V G LL AC++ +V
Sbjct: 758 SMTEKHNLEPSMEHYACMVDLLGCAGLFDEVLCLIDKMPTEPDAQVWGALLGACKMHSNV 817
Query: 489 VIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMI 546
+GE L L+P Y++LS++YA G W D R + D GLKK P YS +
Sbjct: 818 KLGEIALHHLLKLEPRNAVHYIVLSDIYAQCGRWIDARRTRSNMTDHGLKKNPGYSWV 875
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 246/460 (53%), Gaps = 14/460 (3%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L C+ +G+++H + ++ DV + ++++Y K G + ARKVFD+M ++
Sbjct: 133 VLKACTGALDFHEGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKD 192
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISACAGIQSLVKGQQIH 123
+ SW+AMISG Q+ ALE F +M + P+ + A + ++ + + IH
Sbjct: 193 VASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIH 252
Query: 124 AYSLK---FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Y ++ FG V NSLI MY K G A ++ + + + +S+ ++AG+V +
Sbjct: 253 GYVVRRCVFG-----VVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHG 307
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ ++ M R+ + ++ S + + + DL KG +H ++ + S+ V
Sbjct: 308 CYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVAT 367
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
I+++Y+K + +A++ F +E +DL+ W+ F++A + LS+F+EM ++ G++
Sbjct: 368 PIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHE-GLK 426
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD +S+++ACA ++S + GK +H ++I+ + D+ V LV+MY +C + L
Sbjct: 427 PDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTL 486
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN M +++VV+WNT+I AL++F +++ +G++PDS T + LL+AC +
Sbjct: 487 FNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDL 546
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
G + ++ K GI ++ LID+ + G L AE
Sbjct: 547 YLGICFHGNIIKN-GIESEMHVKVALIDMYAKCGSLCTAE 585
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 211/454 (46%), Gaps = 16/454 (3%)
Query: 61 DEMSERNLVSWSAMISGH---HQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLV 117
+ ++ +L+ W+++I + H E + + + S M L P++Y F + AC G
Sbjct: 85 NSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFH 144
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+G IH F+G L+ MY K+G+ +A V+ + ++ S+NA+I+G
Sbjct: 145 EGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLS 204
Query: 178 ENQQPEKGFEVFKLM-LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV-KCKLESN 235
++ P + E+F+ M + +G+ PD S S D+ +H V +C
Sbjct: 205 QSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCVF--- 261
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
V N+++ +YSK + A + F + KD ISW T +A H Y + L + EM
Sbjct: 262 GVVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKR 321
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
H ++ + + + + A ++ GK++H + +++ + D+ V +V+MYAKCG +
Sbjct: 322 KH-IKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELK 380
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ + F + R++V W+ ++A G AL +F++M+ G+KPD L++AC
Sbjct: 381 KAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACA 440
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
+ G+ + K + DI T L+ + R + A + +D +
Sbjct: 441 EISSSRLGKMMHCYVIKA-DMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHY-KDVVAW 498
Query: 476 GTLLSACRLRRDVVIGERLAKQLF-HLQPTTTSP 508
TL++ D RLA ++F LQ + P
Sbjct: 499 NTLINGFTKCGD----PRLALEMFLRLQLSGVQP 528
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 117/462 (25%), Positives = 213/462 (46%), Gaps = 42/462 (9%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+SSL+ C++ + + G +H V+K + D+ V+ ++++Y +C + A +F+ M
Sbjct: 432 LSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMH 491
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQ 121
+++V+W+ +I+G + G+ LALE F ++ L P+ S +SACA + L G
Sbjct: 492 YKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGIC 551
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIAGFVENQ 180
H +K G S V +LI MY K G A L + + VS+N +IAG++ N
Sbjct: 552 FHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNG 611
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ F M + + P+ +F L S + LR+ M H ++ S+ +GN
Sbjct: 612 CANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTLIGN 671
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +Y+K + +EK F +E K ISWN ++ + E L++F M H V
Sbjct: 672 SLIDMYAKSGQLSYSEKCFHEMENKGTISWNAMLSGYAMHGQGEVALALFSLMQETH-VP 730
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D ++ S+L+AC +Q G+ I + + + ++ + L+ C+ L
Sbjct: 731 VDSVSYISVLSACRHAGLIQEGRNIF-----QSMTEKHNLEPSMEHYACMVDLLGCA-GL 784
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+E+ L L ++M +PD+ + LL AC V
Sbjct: 785 FDEV------------------------LCLIDKMPT---EPDAQVWGALLGACKMHSNV 817
Query: 421 KEGEAYFNSMEKTYGISP-DIEHFTCLIDLLGRAGKLLEAEE 461
K GE + + K + P + H+ L D+ + G+ ++A
Sbjct: 818 KLGEIALHHLLK---LEPRNAVHYIVLSDIYAQCGRWIDARR 856
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 69/139 (49%), Gaps = 3/139 (2%)
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
N L+ ++A+ + C+ N + + +++ WN++I A++ L A+K ++ M G++
Sbjct: 66 NPLLQIHARLIVQQCTLAP-NSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLE 124
Query: 402 PDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
PD TF +L AC A EG A + + + D+ T L+D+ + G L A +
Sbjct: 125 PDKYTFTFVLKACTGALDFHEGVAIHQDI-ASRELECDVFIGTGLVDMYCKMGHLDNARK 183
Query: 462 YTKKFPLGQDPIVLGTLLS 480
K P G+D ++S
Sbjct: 184 VFDKMP-GKDVASWNAMIS 201
>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
Length = 710
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 187/578 (32%), Positives = 314/578 (54%), Gaps = 8/578 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVL---KMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
++ LL C+ + L+ G S+H ++ + DV N ++NLY KCG+ + ARKVFD
Sbjct: 34 LNELLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFD 93
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLV 117
M ERN+VSW AM+ G+ +G L+ F M PNE++ +C+ +
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIE 153
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+G+Q H LK G S FV N+L+ MY + +A+ V + +L F++ ++G++
Sbjct: 154 EGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYL 213
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
E ++G EV + M ++ L+ D ++ L +CS DL +H V+ S
Sbjct: 214 ECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVE 273
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
I+ +Y K + A++ F ++++ T + A +E+ L++F +M
Sbjct: 274 ASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKE 333
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
V P+++TFA L + A L+ ++HG +H +++ V VGNALVNMYAK G I +
Sbjct: 334 -VPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDA 392
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
K F+ M R++V+WNT+I ++H LG L+ F++M G P+ +TFIG+L AC+H
Sbjct: 393 RKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQACSHV 452
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
G V++G YFN + K + + PD++H+TC++ LL +AG +AE++ + P+ D +
Sbjct: 453 GFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRA 512
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL+AC +RR+ +G+++A+ + P + YVLLSN++A W VA R ++ G+
Sbjct: 513 LLNACYVRRNFRLGKKVAEYAIYKYPNDSGVYVLLSNIHAKSREWEGVAEVRSLMNKRGV 572
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KKEP S I ++ F E H +I I +K +
Sbjct: 573 KKEPGVSWIGIRNQTHVFLAEENQHPEITLIYAKIKEV 610
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 182/489 (37%), Positives = 292/489 (59%), Gaps = 11/489 (2%)
Query: 95 HLLPNEY---IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
H+ P+E+ +A+A+ C +G+ +H LK G F N L++MY+K +
Sbjct: 30 HVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFL 89
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
DA ++ E E N +SF LI G+ E+ + + E+F + L + +LP++F+FA L+ C
Sbjct: 90 CDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELF-VRLHREVLPNQFTFASVLQAC 148
Query: 212 SVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE---KDLI 268
+ L G +HC +K L S+ FV N +M +Y+K G E + L E ++ +
Sbjct: 149 ATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAK---CGRMENSMELFAESPHRNDV 205
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
+WNT I D EK L +F M ++ V+ + T++S L ACA LA+++ G QIH+
Sbjct: 206 TWNTVIVGHVQLGDGEKALRLFLNML-EYRVQATEVTYSSALRACASLAALEPGLQIHSL 264
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
++ ++D+ V NAL++MYAKCG I + +F+ M ++ VSWN +I+ ++ H LG A
Sbjct: 265 TVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREA 324
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID 448
L++F++M+ T +KPD +TF+G+L+AC +AGL+ +G+AYF SM + +GI P IEH+TC++
Sbjct: 325 LRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVW 384
Query: 449 LLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSP 508
LLGR G L +A + + P +V LL AC + D+ +G A+++ ++P +
Sbjct: 385 LLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKAT 444
Query: 509 YVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
+VLLSN+YA+ W +VA RK +K G+KKEP S IE QGT FTV + SH ++ I
Sbjct: 445 HVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVI 504
Query: 569 NYMLKTLSL 577
N ML+ L +
Sbjct: 505 NGMLEWLHM 513
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 208/408 (50%), Gaps = 22/408 (5%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
L C + +G LH +LK G D+ N +LN+Y K + A K+FDEM ERN
Sbjct: 45 LQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNT 104
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQMH--LLPNEYIFASAISACAGIQSLVKGQQIHAYS 126
+S+ +I G+ ++ L A+E F ++H +LPN++ FAS + ACA ++ L G QIH +
Sbjct: 105 ISFVTLIQGYAESVRFLEAIELFVRLHREVLPNQFTFASVLQACATMEGLNLGNQIHCHV 164
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
+K G S FV N+L+ +Y K G +++ ++ E+ N V++N +I G V+ EK
Sbjct: 165 IKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKAL 224
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
+F ML + +++ L C+ L G+ +H LTVK + + V N ++ +Y
Sbjct: 225 RLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMY 284
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
+K I +A F L+ ++D +SWN I+ S + L +F +M V+PD TF
Sbjct: 285 AKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETE-VKPDKLTF 343
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG------NALVNMYAKCGLISCSYKL 360
+L+ACA + G+ +I QD G+ +V + + G + + KL
Sbjct: 344 VGVLSACANAGLLDQGQAYFTSMI-----QDHGIEPCIEHYTCMVWLLGRGGHLDKAVKL 398
Query: 361 FNEM-LHRNVVSWNTIIAA---HANHRLGG-SALKLFE---QMKATGI 400
+E+ +V+ W ++ A H + LG SA ++ E Q KAT +
Sbjct: 399 IDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHV 446
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 148/290 (51%), Gaps = 9/290 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L C+ + L G +H V+K+G+ DV VSN ++++YAKCG+M + ++F E
Sbjct: 140 TFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAES 199
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
RN V+W+ +I GH Q G+ AL F M + E ++SA+ ACA + +L G
Sbjct: 200 PHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGL 259
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH+ ++K + V N+LI MY K G DA LV+ + + VS+NA+I+G+ +
Sbjct: 260 QIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHG 319
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ +F M + PD+ +F G L C+ + L +G ++ P + +
Sbjct: 320 LGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQ-DHGIEPCIEH 378
Query: 241 TIMALYSKFNLIGEAEKAFRLIEE----KDLISWNTFIAACSHCADYEKG 286
++ G +KA +LI+E ++ W + AC D E G
Sbjct: 379 YTCMVW-LLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELG 427
>gi|449444600|ref|XP_004140062.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 193/582 (33%), Positives = 322/582 (55%), Gaps = 13/582 (2%)
Query: 4 SISSLL---HHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
+ISSLL + K QG + H + + G + V N +L+LYA+ M A K+F
Sbjct: 147 NISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEV-HMYFAHKLF 205
Query: 61 DEMSERN-LVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQS 115
EMS RN +VSWS MI G Q GE F M + P+ S + AC ++
Sbjct: 206 GEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKD 265
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
+ G +H + G FVGNSLI MY K A + E E N++S+N +++
Sbjct: 266 ISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSA 325
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
++ N+ + + M+R+G D + A L+I D K +H + ++ ESN
Sbjct: 326 YILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESN 385
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
+ N+++ Y+K NL+ A F + +KD+++W+T IA + ++ +SVFK+M+
Sbjct: 386 ELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQMNE 445
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
+ V P++ + +++ ACA A ++ K H +R L +V +G ++++MY+KCG I
Sbjct: 446 E--VIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVDIGTSIIDMYSKCGDIE 503
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
S + FN++ +NVV W+ +I+A + L AL LFE++K G KP++VT + LL+AC+
Sbjct: 504 ASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPNAVTALSLLSACS 563
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP--LGQDPI 473
H GL++EG ++F SM + +GI P +EH++C++D+L RAGK EA E +K P +
Sbjct: 564 HGGLMEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRAGKFNEALELIEKLPKEMEAGAS 623
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
+ GTLLS+CR ++ +G A ++ L+P +++ Y+L SNLYA+ G+ D A R++ K
Sbjct: 624 IWGTLLSSCRSYGNISLGSGAASRVLQLEPLSSAGYMLASNLYANCGLMIDSAKMRRLAK 683
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ G+K YS++ + +F + + + EI M+K L
Sbjct: 684 EKGVKVVAGYSLVHINSQTWRFVAGDVLNPRADEIYLMVKKL 725
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 130/485 (26%), Positives = 257/485 (52%), Gaps = 11/485 (2%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+ S+L CS T + G ++H ++K G Q ++N ++ Y K G + A++ FD
Sbjct: 51 LPSILKACSNT-SFNLGTAMHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTK 109
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQ---MHLLPNEYIFASAISACAGIQSLVKGQQ 121
++ VSW+ M+ G+ G + L +F + H PN I A ++ +G
Sbjct: 110 NKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFA 169
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGE-AFEPNLVSFNALIAGFVENQ 180
H Y + G+++I V NSL+S+Y +V + A ++GE + ++VS++ +I GFV+
Sbjct: 170 FHGYIFRSGFSAILSVQNSLLSLYAEV-HMYFAHKLFGEMSVRNDVVSWSVMIGGFVQIG 228
Query: 181 QPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ E+GF +F+ M+ + G+ PD + L+ C+ D+ G ++H L + LE + FVG
Sbjct: 229 EDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVG 288
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N+++ +YSK + A KAF+ I EK++ISWN ++A + + L++ M + G
Sbjct: 289 NSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVRE-GA 347
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
D+ T A++L + +H +IR + + N++++ YAKC L+ +
Sbjct: 348 EKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARM 407
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F+ M ++VV+W+T+IA A + A+ +F+QM I P++V+ + L+ AC +
Sbjct: 408 VFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQMNEEVI-PNNVSIMNLMEACAVSAE 466
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
+++ + + + + G++ +++ T +ID+ + G + + + P ++ + ++
Sbjct: 467 LRQSK-WAHGIAVRRGLASEVDIGTSIIDMYSKCGDIEASIRAFNQIP-QKNVVCWSAMI 524
Query: 480 SACRL 484
SA R+
Sbjct: 525 SAFRI 529
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 266 DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
DLIS I S+ ++++ L ++ E+ D + SIL AC+ S G +
Sbjct: 14 DLIS---KIKDASYSGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSN-TSFNLGTAM 69
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
H LI+ + N+ ++ Y K G + + + F+ +++ VSWN ++ H N G
Sbjct: 70 HGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMV--HGNFSNG 127
Query: 386 G--SALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
+ L F + + +P+ + + ++ A + +G A+
Sbjct: 128 SIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAF 170
>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
Length = 794
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 201/595 (33%), Positives = 316/595 (53%), Gaps = 34/595 (5%)
Query: 4 SISSLLHHCSK-TKALQQGISLHAAVLKMGI--QPDVIVSNHVLNLYAKCGKMILARKVF 60
++ S+L CS + L+ G HA LK G + N +L++YA+ G + A+ +F
Sbjct: 162 TLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLF 221
Query: 61 DEMSERNL-----VSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAG 112
+ ++ V+W+ M+S Q+G A+E M + P+ FASA+ AC+
Sbjct: 222 GSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQ 281
Query: 113 IQSLVKGQQIHAYSLKFG-YASISFVGNSLISMYMKVGYSSDALLVYG--EAFEPNLVSF 169
++ L G+++HAY LK A+ SFV ++L+ MY A LV+ A E L +
Sbjct: 282 LEMLSLGREMHAYVLKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQLGLW 341
Query: 170 NALIAGFVENQQPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV 228
NA+I G+ + E E+F M + G++P + AG L C+ S +H V
Sbjct: 342 NAMICGYAQAGLDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVV 401
Query: 229 KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLS 288
K + NPFV N +M LY++ + A F IE +D++SWNT I C
Sbjct: 402 KRGMADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQ 461
Query: 289 VFKEM-----------------SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
+ +EM +++ V P++ T ++L CA LA+ GK+IH + +R
Sbjct: 462 LVREMQQQGRFTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVR 521
Query: 332 MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
L+ DV VG+ALV+MYAKCG ++ S +F+ + RNV++WN +I A+ H LG A+ L
Sbjct: 522 HALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIAL 581
Query: 392 FEQMKATG-IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLL 450
F++M A+ KP+ VTFI L AC+H+G+V G F SM++ +G+ P + C +D+L
Sbjct: 582 FDRMVASDEAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHACAVDIL 641
Query: 451 GRAGKLLEAEEYTKKFPLGQDPI-VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPY 509
GRAG+L EA G+ + + L ACRL R+V +GE A++LF L+P S Y
Sbjct: 642 GRAGRLDEAYRIISSMEPGEQQVSAWSSFLGACRLHRNVALGEIAAERLFELEPDEASHY 701
Query: 510 VLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSK 564
VLL N+Y++ G+W + R ++ G+ KEP S IE+ G +F E +H +
Sbjct: 702 VLLCNIYSAAGLWEKSSEVRSRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPE 756
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/487 (25%), Positives = 227/487 (46%), Gaps = 37/487 (7%)
Query: 16 KALQQGISLHAAVLKMGI--QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSA 73
++L S+H A L+ + P VSN +L YA+CG + A +FD M R+ V++++
Sbjct: 71 RSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAALALFDAMPSRDAVTFNS 130
Query: 74 MISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGI-QSLVKGQQIHAYSLK 128
+I+ L AL+ M H L + S + AC+ + + L G++ HA++LK
Sbjct: 131 LIAALCLFRRWLPALDALRDMLLEGHPL-TSFTLVSVLLACSHLAEDLRLGREAHAFALK 189
Query: 129 FGY--ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPN-----LVSFNALIAGFVENQQ 181
G+ F N+L+SMY ++G DA ++G + +V++N +++ V++ +
Sbjct: 190 NGFLDGDERFAFNALLSMYARLGLVDDAQTLFGSVGATDVPGGGVVTWNTMVSLLVQSGR 249
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK-CKLESNPFVGN 240
+ EV M+ +G+ PD +FA L CS L G +H +K L +N FV +
Sbjct: 250 CGEAIEVLYDMVARGVRPDGVTFASALPACSQLEMLSLGREMHAYVLKDADLAANSFVAS 309
Query: 241 TIMALYSKFNLIGEAEKAFRLIE--EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++ +Y+ +G A F ++ E+ L WN I + E L +F M + G
Sbjct: 310 ALVDMYASHERVGAARLVFDMVPAGERQLGLWNAMICGYAQAGLDEDALELFARMETEAG 369
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
V P + T A +L +CA + + +H ++++ + + V NAL+++YA+ G + +
Sbjct: 370 VVPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNPFVQNALMDLYARLGDMDAAR 429
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG------------------I 400
+F + R+VVSWNT+I A +L +M+ G +
Sbjct: 430 WIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQQGRFTDAATEDGIAGADEEPV 489
Query: 401 KPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
P+++T + LL C G+ + + + D+ + L+D+ + G L +
Sbjct: 490 VPNNITLMTLLPGCAMLAAPARGKE-IHGYAVRHALDSDVAVGSALVDMYAKCGCLALSR 548
Query: 461 EYTKKFP 467
+ P
Sbjct: 549 AVFDRLP 555
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRL--NQDVGVGNALVNMYAKCGLISCSYK 359
D F + A L S+ + IH +R L V NAL+ YA+CG ++ +
Sbjct: 56 DRFALPPAAKSAAALRSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAALA 115
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
LF+ M R+ V++N++IAA R AL M G S T + +L AC+H
Sbjct: 116 LFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLTSFTLVSVLLACSH 172
>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 183/563 (32%), Positives = 317/563 (56%), Gaps = 5/563 (0%)
Query: 17 ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMIS 76
L G +HA ++ I+ ++++ ++++Y KC + A KV E ++ W+A+IS
Sbjct: 231 GLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIIS 290
Query: 77 GHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYAS 133
G Q+ + A+ F +M ++PN + ++ ++AC+ I +L G+QIH+ + G +
Sbjct: 291 GFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLEN 350
Query: 134 ISFVGNSLISMYMKV-GYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM 192
VGNSL+ MYMK DA+ + PN++S+ +LIAGF E+ E+ +VF M
Sbjct: 351 DVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAM 410
Query: 193 LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI 252
G+ P+ F+ + L C L + LH +K +++ VGN ++ Y+ ++
Sbjct: 411 QGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMV 470
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
+A +++ +D+I++ + + ++E L++ M+ D VR D F+ AS L+A
Sbjct: 471 DDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDD-VRMDGFSLASFLSA 529
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
AG+ ++ GKQ+H + ++ L + V N LV++Y KCG I +++ F E+ + VSW
Sbjct: 530 AAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSW 589
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
N +I A++ SAL FE M+ G++PD +T + +L AC+H GLV G YF SM +
Sbjct: 590 NGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMRE 649
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGE 492
+GI P ++H+ CL+DLLGRAG+L EA + P D ++ TLL AC+L ++ +GE
Sbjct: 650 KHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPLGE 709
Query: 493 RLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTF 552
+A+Q L P+ + YVLL+NLY G R+M+++ G++K P S +E +
Sbjct: 710 HMARQGLELDPSDPAFYVLLANLYDDSGRSELGEKTRRMMRERGVRKNPGQSWMEERNMV 769
Query: 553 EKFTVAEFSHSKIGEINYMLKTL 575
FT + SH +IG+I+ +++L
Sbjct: 770 HLFTAGDTSHPQIGKIHEKIESL 792
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 126/405 (31%), Positives = 229/405 (56%), Gaps = 6/405 (1%)
Query: 14 KTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSA 73
+++++ GI +H+ ++KMG Q D+ +SN++L+LY KC + AR++FDEM R++ SW+
Sbjct: 27 NSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTM 86
Query: 74 MISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFG 130
++S + + G H ALE F M + PNE+ ++A+ +C+ ++ G + A K G
Sbjct: 87 LMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSG 146
Query: 131 YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFK 190
+ S +G++LI Y K G + +A V+ ++VS+ +++ FVE + +++
Sbjct: 147 FDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYH 206
Query: 191 LMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN 250
M++ G+ P+ F+F L S L G ++H + ++E N + ++ +Y K
Sbjct: 207 RMIQTGVAPNEFTFVKLLAASSFLG-LNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQ 265
Query: 251 LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
I +A K +L E D+ W I+ + + + ++ F EM GV P++FT++ IL
Sbjct: 266 SIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETS-GVVPNNFTYSGIL 324
Query: 311 AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC-GLISCSYKLFNEMLHRNV 369
AC+ + ++ GKQIH+ ++ L DV VGN+LV+MY KC +I + + F + NV
Sbjct: 325 NACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNV 384
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+SW ++IA + H L ++K+F M+ G++P+S T +L AC
Sbjct: 385 ISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGAC 429
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 240/463 (51%), Gaps = 13/463 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++S+ L CS + G A V K G + ++ + +++ Y+KCG A +VF+ M
Sbjct: 118 TLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYM 177
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ ++VSW+ M+S +AG AL+ + +M + PNE+ F ++A + L G+
Sbjct: 178 NNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAA-SSFLGLNYGK 236
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+HA+ + + + +L+ MY K DA+ V E ++ + A+I+GF ++
Sbjct: 237 LVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSL 296
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ + F M G++P+ F+++G L CS L G +H V LE++ VGN
Sbjct: 297 KFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGN 356
Query: 241 TIMALYSKF-NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+++ +Y K N+I +A +AFR I ++ISW + IA S E+ + VF M GV
Sbjct: 357 SLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGV-GV 415
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
RP+ FT ++IL AC + S+ +++H ++I+ + DV VGNALV+ YA G++ ++
Sbjct: 416 RPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWH 475
Query: 360 LFNEMLHRNVVSWNTI---IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ + M HR+V+++ ++ I NH + AL + M ++ D + L+A
Sbjct: 476 VTSMMKHRDVITYTSLATRINQTGNHEM---ALNIITHMNKDDVRMDGFSLASFLSAAAG 532
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+++ G+ K+ G+ I L+DL G+ G + +A
Sbjct: 533 IPIMETGKQLHCYSVKS-GLGSWISVSNGLVDLYGKCGCIHDA 574
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 176/359 (49%), Gaps = 3/359 (0%)
Query: 100 EYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG 159
EY I + +S+ G IH+ +K G+ F+ N+L+S+Y K ++A ++
Sbjct: 15 EYSLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFD 74
Query: 160 EAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRK 219
E ++ S+ L++ + + E+ E+F ML G P+ F+ + L CS +
Sbjct: 75 EMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNH 134
Query: 220 GMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSH 279
G L K +SNP +G+ ++ YSK EA + F + D++SW +++
Sbjct: 135 GTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVE 194
Query: 280 CADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG 339
+ + L ++ M GV P++FTF +LAA + L + +GK +HAHL+ R+ ++
Sbjct: 195 AGSWSQALQLYHRMIQT-GVAPNEFTFVKLLAASSFLG-LNYGKLVHAHLMMWRIELNLV 252
Query: 340 VGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG 399
+ ALV+MY KC I + K+ L +V W II+ A+ F +M+ +G
Sbjct: 253 LKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSG 312
Query: 400 IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLE 458
+ P++ T+ G+L AC+ + G+ +S G+ D+ L+D+ + ++E
Sbjct: 313 VVPNNFTYSGILNACSSILALDLGKQ-IHSRVVMAGLENDVSVGNSLVDMYMKCSNMIE 370
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S++S L + ++ G LH +K G+ + VSN +++LY KCG + A + F E+
Sbjct: 522 SLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEI 581
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACA 111
+E + VSW+ +I G G AL F M L P++ + AC+
Sbjct: 582 TEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACS 632
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 199/608 (32%), Positives = 308/608 (50%), Gaps = 69/608 (11%)
Query: 23 SLHAAVLKMGIQPD-VIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQA 81
++HA +L+ P + N +L YA G + AR+VFD M RNLV+ ++++S +A
Sbjct: 31 AVHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARA 90
Query: 82 G-----EHLLA-------------LEFFS------------------QMHLLPNEYIFAS 105
G E L L FS + + P+ +
Sbjct: 91 GLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSG 150
Query: 106 AISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPN 165
+ + + G+Q+H L+ G+ + +F G+ L+ MY KVG DA V+ E N
Sbjct: 151 VVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKN 210
Query: 166 LVSFNALIAGFV-------------------------------ENQQPEKGFEVFKLMLR 194
+V N +I G + +N + +VF+ M
Sbjct: 211 VVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRA 270
Query: 195 QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGE 254
+G+ D+++F L C L +G +H + E N FVG+ ++ +YSK +
Sbjct: 271 EGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRL 330
Query: 255 AEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA 314
AE FR + K++ISW I E+ + VF EM D G++PDDFT S++++CA
Sbjct: 331 AEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRD-GIKPDDFTLGSVISSCA 389
Query: 315 GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNT 374
LAS++ G Q H + L V V NALV +Y KCG I +++LF+EM + VSW
Sbjct: 390 NLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTA 449
Query: 375 IIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTY 434
++ +A + LFE+M + G+KPD VTFIG+L+AC+ +GLV +G +YF+SM++ +
Sbjct: 450 LVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDH 509
Query: 435 GISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERL 494
I P +H+TC+IDL R+G L +AEE+ K+ P D TLLSACRLR D+ IG+
Sbjct: 510 DIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWA 569
Query: 495 AKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEK 554
A+ L L P + YVLL +++AS G W DVA R+ ++D +KKEP S I+ +
Sbjct: 570 AENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHI 629
Query: 555 FTVAEFSH 562
F+ + SH
Sbjct: 630 FSADDQSH 637
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 188/397 (47%), Gaps = 43/397 (10%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM----------------- 63
G +H +L++G + ++++YAK G + AR+VFDEM
Sbjct: 164 GRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLR 223
Query: 64 --------------SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASA 106
ER+ ++W+ M++G Q G AL+ F +M + ++Y F S
Sbjct: 224 CKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSI 283
Query: 107 ISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNL 166
++AC + +L +G+QIHAY + Y FVG++L+ MY K A V+ N+
Sbjct: 284 LTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNI 343
Query: 167 VSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCL 226
+S+ A+I G+ +N E+ VF M R G+ PD F+ + C+ L +G HCL
Sbjct: 344 ISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCL 403
Query: 227 TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKG 286
+ L V N ++ LY K I +A + F + D +SW + + ++
Sbjct: 404 ALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKET 463
Query: 287 LSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN---- 342
+ +F++M + GV+PD TF +L+AC+ V G+ ++ M+ + D+ +
Sbjct: 464 IDLFEKMLS-KGVKPDGVTFIGVLSACSRSGLVDKGR---SYFHSMQQDHDIVPLDDHYT 519
Query: 343 ALVNMYAKCGLISCSYKLFNEMLH-RNVVSWNTIIAA 378
++++Y++ G + + + +M + W T+++A
Sbjct: 520 CMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSA 556
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 150/288 (52%), Gaps = 5/288 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S+L C AL++G +HA + + + +V V + ++++Y+KC + LA VF M
Sbjct: 279 TFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRM 338
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+N++SW+AMI G+ Q G A+ FS+M + P+++ S IS+CA + SL +G
Sbjct: 339 MWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGA 398
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q H +L G V N+L+++Y K G DA ++ E + VS+ AL+ G+ +
Sbjct: 399 QFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFG 458
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVG 239
+ ++ ++F+ ML +G+ PD +F G L CS S + KG H + +
Sbjct: 459 KAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHY 518
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEE-KDLISWNTFIAACSHCADYEKG 286
++ LYS+ + +AE+ + + D W T ++AC D E G
Sbjct: 519 TCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIG 566
>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
Length = 923
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 190/579 (32%), Positives = 316/579 (54%), Gaps = 12/579 (2%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
L+ C ++ + + +HA ++ D +V ++N+Y K GK+ A ++F+ + ER++
Sbjct: 247 LNACCHSRDFSEALRIHAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDV 306
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAY 125
VSW+AM++ + G H A + F +M L LP+ + + ++AC L G +
Sbjct: 307 VSWNAMLTANACNGFHDKAFKCFREMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTL 366
Query: 126 SLK--FGYASISFV-GNSLISMYMKVGYS----SDALLVYGEAFEPNLVSFNALIAGFVE 178
+++ G S+ V G ++++MY + S +LL+ + +P+++ +N +++ +VE
Sbjct: 367 AVEGGCGIESVDVVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVE 426
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N+Q E+ F +F+LML G+ D S C S L KG +H L + +L V
Sbjct: 427 NEQFEEAFTIFRLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPV 486
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N ++ +Y++ + +A + F + +++ISW + S + L +F+ + + G
Sbjct: 487 QNALVTMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLE-G 545
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
V P++ TF ++L AC LAS+ K + A L +V V N L+ KCG +
Sbjct: 546 VAPNEVTFTAVLNACGNLASIPAAKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVA 605
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
F M +N VSWNT IAA+A H G ++LF+ M+ GI SVT IG+L++C+HAG
Sbjct: 606 NFFQVMAVKNQVSWNTAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAG 665
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG-T 477
LV +G +YF +M YG + EH++C+IDLL RAG L AEE+ K+ P G + T
Sbjct: 666 LVAQGYSYFLNMHVDYGFPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDQSVFPWIT 725
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL C+L D+ G R +++ L P +T PY+++ NLYA G W + A RK + + G
Sbjct: 726 LLCGCKLHGDLERGGRATQRILGLNPGSTGPYLVMHNLYAGAGKWPEAAAVRKSMVELGP 785
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
KKEP S IEV+G +F V + SH + EI+ L+ L+
Sbjct: 786 KKEPGLSWIEVKGRIHEFRVGDTSHPRSSEIHRELERLN 824
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 136/443 (30%), Positives = 224/443 (50%), Gaps = 18/443 (4%)
Query: 33 IQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMIS---GHHQAGEHLLALE 89
++ DVIV+ V+N Y KCG + A VFD + R+ W+AMIS H Q E ALE
Sbjct: 170 LELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAHEQGDE---ALE 226
Query: 90 FFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYM 146
F QM L PN+ +A++AC + + +IHA++ + + + V +L++MY
Sbjct: 227 LFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTVVQTALVNMYG 286
Query: 147 KVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAG 206
K G DA ++ E ++VS+NA++ N +K F+ F+ ML G LP R ++
Sbjct: 287 KFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGELPSRITYVA 346
Query: 207 GLEICSVSNDLRKGMILHCLTVK--CKLESNPFV-GNTIMALYSKFNLIGEAEKAFRLIE 263
L C ++ L+ G + L V+ C +ES V G IM +YS+ A + L+E
Sbjct: 347 ILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKSPKSAFSSSLLLE 406
Query: 264 EK----DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+ ++ WNT ++ +E+ ++F+ M GV D + ++ AC AS+
Sbjct: 407 QDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLG-GVTIDTVSLMTVFNACGSSASL 465
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
+ GK IH+ L L + V NALV MYA+ G + + ++F+ M RNV+SW ++ H
Sbjct: 466 EKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVISWTAMVGVH 525
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
+ L AL++F + G+ P+ VTF +L AC + + + + +T G +
Sbjct: 526 SQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLSET-GFFGN 584
Query: 440 IEHFTCLIDLLGRAGKLLEAEEY 462
+E L+ LG+ G L E +
Sbjct: 585 VEVANGLLCTLGKCGSLEEVANF 607
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/471 (24%), Positives = 228/471 (48%), Gaps = 16/471 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + ++L+H C++ L QG +H +L+ GI+ + +L +Y KCG AR VF
Sbjct: 40 ASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVFQ 99
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVK 118
+ ++++V+W+++I + ++G A F +M L +PN+ + + + AC +
Sbjct: 100 GIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEV-- 157
Query: 119 GQQIHAYSLKFGYASIS-FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
I A G + V ++++ Y K G A V+ + +NA+I+ V
Sbjct: 158 -DTIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLV 216
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
++Q ++ E+F+ M G+ P++ + L C S D + + +H + +++
Sbjct: 217 AHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTV 276
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V ++ +Y KF + +AE+ F I+E+D++SWN + A + ++K F+EM
Sbjct: 277 VQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLL-V 335
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRL---NQDVGVGNALVNMYAKC--- 351
G P T+ +IL AC A ++HG + + + DV +G A++NMY++C
Sbjct: 336 GELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKSP 395
Query: 352 -GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGL 410
S S L + +++ WNT+++ + + A +F M G+ D+V+ + +
Sbjct: 396 KSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMTV 455
Query: 411 LTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
AC + +++G+ + +S+ ++ L+ + R G L +A E
Sbjct: 456 FNACGSSASLEKGK-WIHSLLTESELTRKTPVQNALVTMYARLGSLEDARE 505
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 142/288 (49%), Gaps = 17/288 (5%)
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
D +FA + C+ +DL +G +H L ++ +E F+G ++A+Y K EA F
Sbjct: 39 DASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVF 98
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+ I++K +++W + I + ++ +F+EM GV P+D T+ ++L AC
Sbjct: 99 QGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREM-QLQGVMPNDVTYVAVLGAC------ 151
Query: 320 QHGKQIHAHLIRMR------LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
G IR R L DV V A++N Y KCG + ++ +F+ +L R+ WN
Sbjct: 152 --GHPWEVDTIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWN 209
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT 433
+I+ H G AL+LF QM+ G+ P+ T + L AC H+ E ++ +
Sbjct: 210 AMISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEA-LRIHAFARE 268
Query: 434 YGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
D T L+++ G+ GK+ +AEE ++ +D + +L+A
Sbjct: 269 LAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQ-ERDVVSWNAMLTA 315
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 137/292 (46%), Gaps = 12/292 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+ ++ + C + +L++G +H+ + + + V N ++ +YA+ G + AR++FD M
Sbjct: 451 SLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAM 510
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+ RN++SW+AM+ H Q G + AL F + L PNE F + ++AC + S+ +
Sbjct: 511 TTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAK 570
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+ A + G+ V N L+ K G + + N VS+N IA ++
Sbjct: 571 LVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQHG 630
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKG----MILHCLTVKCKLESNP 236
+G E+F+ M +G+ + G L CS + + +G + +H V +
Sbjct: 631 NGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMH---VDYGFPAEA 687
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIE--EKDLISWNTFIAACSHCADYEKG 286
+ ++ L S+ + AE+ + + ++ + W T + C D E+G
Sbjct: 688 EHYSCVIDLLSRAGWLEHAEEFVKRLPFGDQSVFPWITLLCGCKLHGDLERG 739
>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 902
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 196/577 (33%), Positives = 316/577 (54%), Gaps = 9/577 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C+ + G + +K + + V+N L++++K G + A+ +F+ ++ +
Sbjct: 306 SVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYK 365
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIH 123
+ VSW+A++ G E A+ M+L P+E FA+ I+AC+ I++ G+QIH
Sbjct: 366 DTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIH 425
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
++K S VG+SLI Y K G V + ++V N LIAG V+N + +
Sbjct: 426 CLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNRED 485
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK-LESNPFVGNTI 242
+ ++F+ +LR GL P F+F+ L C+ G +HC T+K L + VG ++
Sbjct: 486 EAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSL 545
Query: 243 MALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAACSHCA-DYEKGLSVFKEMSNDHGVR 300
+ Y K + +A K + + K+L+ W ++ + Y+ LS ++ S D V
Sbjct: 546 VGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYD--VH 603
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD+ TFASIL AC+ + ++ GK+IH +I+ +A+++MY+KCG I S++
Sbjct: 604 PDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEA 663
Query: 361 FNEMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
F E+ + ++ WN++I A + AL LF++M+ + IK D VTF+G+L AC HAGL
Sbjct: 664 FKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIKSDEVTFLGVLIACAHAGL 723
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
+ EG YF+SM K YGI P ++H+ C IDLLGR G L EA+E + P D ++ T L
Sbjct: 724 ISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGHLQEAQEVINELPFRPDGVIWATYL 783
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
+ACR+ +D GE AK+L L+P +S YVLLSN+YA+ G W + AR+ +++ G K
Sbjct: 784 AACRMHKDEERGEIAAKELVELEPQNSSTYVLLSNMYAAAGNWVEAKMAREAMREKGATK 843
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
P S I V F V + +H I ML L+
Sbjct: 844 FPGCSWITVGNKTSLFLVQDKNHLGALRIYEMLDNLT 880
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/481 (29%), Positives = 248/481 (51%), Gaps = 7/481 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L + A +G +HAA ++ G+ +V V + ++NLYAKCG + A VFD
Sbjct: 202 TFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCS 261
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
E+N+V W+AM++G + + A++ F M L +E+ + S + ACA + S G+
Sbjct: 262 GEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGR 321
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+ ++K + FV N+ + M+ K G DA ++ + VS+NAL+ G N+
Sbjct: 322 QVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNE 381
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ E+ + K M G+ PD SFA + CS G +HCL +K + SN VG+
Sbjct: 382 EDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGS 441
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ YSK + K ++ ++ N IA ++ + +F+++ D G++
Sbjct: 442 SLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRD-GLK 500
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCSYK 359
P FTF+SIL+ C GL S GKQ+H + ++ LN D VG +LV Y K + + K
Sbjct: 501 PSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANK 560
Query: 360 LFNEML-HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
L EM H+N+V W I++ +A + +L F +M++ + PD VTF +L AC+
Sbjct: 561 LLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMT 620
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
+ +G+ + K+ G + +ID+ + G ++ + E K+ QD + ++
Sbjct: 621 ALSDGKEIHGLIIKS-GFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSM 679
Query: 479 L 479
+
Sbjct: 680 I 680
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 125/403 (31%), Positives = 221/403 (54%), Gaps = 6/403 (1%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM-SERNLVSWSAMIS 76
Q+ + L + KMG PD + V+ G++ AR + M + + V+W+A+IS
Sbjct: 113 FQEAVCLFTRMEKMGSSPDRVTCVAVVCALTALGRLEDARTLLHRMPAPSSTVAWNAVIS 172
Query: 77 GH-HQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYA 132
G+ Q+G + M L P FAS +SA A + ++G+Q+HA +++ G
Sbjct: 173 GYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLD 232
Query: 133 SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM 192
+ FVG+SLI++Y K G DA+LV+ + E N+V +NA++ G V N+ + ++F M
Sbjct: 233 ANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYM 292
Query: 193 LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI 252
R GL D F++ L C+ + G + C+T+K ++++ FV N + ++SKF I
Sbjct: 293 KRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAI 352
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
+A+ F LI KD +SWN + +H + E+ + + K M+ D GV PD+ +FA+++ A
Sbjct: 353 DDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLD-GVTPDEVSFATVINA 411
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
C+ + + + GKQIH ++ + + VG++L++ Y+K G + K+ ++ ++V
Sbjct: 412 CSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPR 471
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
N +IA + A+ LF+Q+ G+KP S TF +L+ C
Sbjct: 472 NVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCT 514
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 205/422 (48%), Gaps = 35/422 (8%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+++ L CS+ AL G H K G+ + ++N+YA+CG++ AR+VF +S
Sbjct: 34 LAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDARRVFGGIS 93
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHA 124
+ V W++MISG+H+AG A+ F++M
Sbjct: 94 LPDTVCWASMISGYHRAGRFQEAVCLFTRME----------------------------- 124
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPN-LVSFNALIAGFVENQQPE 183
K G + +++ +G DA + P+ V++NA+I+G+ + E
Sbjct: 125 ---KMGSSPDRVTCVAVVCALTALGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIE 181
Query: 184 -KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
+ F ++K M GL P R +FA L + + +G +H V+ L++N FVG+++
Sbjct: 182 HEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSL 241
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ LY+K IG+A F EK+++ WN + + + +F M G+ D
Sbjct: 242 INLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKR-LGLEAD 300
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+FT+ S+L ACA L S G+Q+ I+ ++ + V NA ++M++K G I + LFN
Sbjct: 301 EFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFN 360
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+ +++ VSWN ++ ++ A+ + + M G+ PD V+F ++ AC++ +
Sbjct: 361 LITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATET 420
Query: 423 GE 424
G+
Sbjct: 421 GK 422
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 4/135 (2%)
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
GVRPD F A+ L+AC+ L ++ GKQ H + L ALVNMYA+CG + +
Sbjct: 26 GVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDA 85
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLG--GSALKLFEQMKATGIKPDSVTFIGLLTACN 415
++F + + V W ++I+ + HR G A+ LF +M+ G PD VT + ++ A
Sbjct: 86 RRVFGGISLPDTVCWASMISGY--HRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALT 143
Query: 416 HAGLVKEGEAYFNSM 430
G +++ + M
Sbjct: 144 ALGRLEDARTLLHRM 158
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 197/556 (35%), Positives = 299/556 (53%), Gaps = 51/556 (9%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAG 112
A VF+ + E NL+ W+ M GH + + + AL+ + M LLPN Y F + +CA
Sbjct: 44 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 103
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
++ +GQQIH + LK G +V SLISMY++ G DA V+ E+ ++VS+ AL
Sbjct: 104 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTAL 163
Query: 173 IA-----GFVENQQP--------------------------EKGFEVFKLMLRQGLLPDR 201
I G++EN Q ++ E+FK M++ + PD
Sbjct: 164 IKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 223
Query: 202 FSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRL 261
+ + C+ S + G +H SN + N ++ LYSK GE E A L
Sbjct: 224 STMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSK---CGELETACGL 280
Query: 262 IE---EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
E KD+ISWNT I +H Y++ L +F+EM G P+D T SIL ACA L +
Sbjct: 281 FEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS-GETPNDVTMLSILPACAHLGA 339
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNA------LVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
+ G+ IH + I RL GV NA L++MYAKCG I ++++FN +LH+++ SW
Sbjct: 340 IDIGRWIHVY-IDKRLK---GVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSW 395
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
N +I A H ++ +F +M+ GI+PD +TF+GLL+AC+H+G++ G F SM +
Sbjct: 396 NAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQ 455
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGE 492
Y ++P +EH+ C+IDLLG +G EAEE + D ++ +LL AC++ +V +GE
Sbjct: 456 DYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGE 515
Query: 493 RLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTF 552
A+ L ++P YVLLSN+YA+ G W +VA R +L D G+KK P S IE+
Sbjct: 516 SFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVV 575
Query: 553 EKFTVAEFSHSKIGEI 568
+F + + H + EI
Sbjct: 576 HEFIIGDKFHPRNREI 591
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 125/487 (25%), Positives = 219/487 (44%), Gaps = 72/487 (14%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER- 66
LL C+K+KA ++G +H VLK+G D+ V ++++Y + G++ A KVFDE R
Sbjct: 97 LLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRD 156
Query: 67 ------------------------------NLVSWSAMISGHHQAGEHLLALEFFSQM-- 94
++VSW+AMISG+ + G + ALE F M
Sbjct: 157 VVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK 216
Query: 95 -HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSD 153
++ P+E + +SACA S+ G+Q+H++ G+ S + N+LI +Y K G
Sbjct: 217 TNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELET 276
Query: 154 ALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSV 213
A ++ +++S+N LI G+ ++ +F+ MLR G P+ + L C+
Sbjct: 277 ACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 336
Query: 214 SNDLRKGMILHC-LTVKCKLESN-PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
+ G +H + + K +N + +++ +Y+K I A + F I K L SWN
Sbjct: 337 LGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWN 396
Query: 272 TFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
I + + +F M + G+ PDD TF +L+AC+ + G+ H+ R
Sbjct: 397 AMIFGFAMHGRADASFDIFSRMRKN-GIEPDDITFVGLLSACSHSGMLDLGR----HIFR 451
Query: 332 MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
+ QD YK+ ++ H + +I + L A ++
Sbjct: 452 -SMTQD--------------------YKMTPKLEH-----YGCMIDLLGHSGLFKEAEEM 485
Query: 392 FEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLG 451
M+ ++PD V + LL AC G V+ GE++ ++ K +P + L ++
Sbjct: 486 INTME---MEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPG--SYVLLSNIYA 540
Query: 452 RAGKLLE 458
AG+ E
Sbjct: 541 TAGRWNE 547
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 155/319 (48%), Gaps = 7/319 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ +++ C+++ +++ G +H+ + G ++ + N +++LY+KCG++ A +F+ +
Sbjct: 225 TMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGL 284
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
++++SW+ +I G+ + AL F +M PN+ S + ACA + ++ G+
Sbjct: 285 PYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGR 344
Query: 121 QIHAYSLKF--GYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
IH Y K G A+ S + SLI MY K G A V+ +L S+NA+I GF
Sbjct: 345 WIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAM 404
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPF 237
+ + + F++F M + G+ PD +F G L CS S L G I +T K+
Sbjct: 405 HGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLE 464
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
++ L L EAE+ +E E D + W + + AC + E G S + +
Sbjct: 465 HYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKI 524
Query: 297 HGVRPDDFTFASILAACAG 315
P + S + A AG
Sbjct: 525 EPENPGSYVLLSNIYATAG 543
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 139/292 (47%), Gaps = 37/292 (12%)
Query: 222 ILHCLTVKCKLESNPFVGNTIMA---LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
++H +K L + + + ++ L F+ + A F I+E +L+ WNT +
Sbjct: 8 MIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHA 67
Query: 279 HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
+D L ++ M + G+ P+ +TF +L +CA + + G+QIH H++++ + D+
Sbjct: 68 LSSDPVSALKLYVCMIS-LGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 126
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHR------------------------------- 367
V +L++MY + G + ++K+F+E HR
Sbjct: 127 YVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVK 186
Query: 368 NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYF 427
+VVSWN +I+ +A AL+LF+ M T ++PD T + +++AC +G ++ G
Sbjct: 187 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ-V 245
Query: 428 NSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
+S +G +++ LIDL + G+L A + P +D I TL+
Sbjct: 246 HSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPY-KDVISWNTLI 296
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 182/574 (31%), Positives = 318/574 (55%), Gaps = 5/574 (0%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
I +L+ + ++ K+ Q LHA ++ S V+++Y + A VF +
Sbjct: 8 IKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASI-VISIYTNLKLLHEALLVFKTLE 66
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQ 121
+++W ++I AL F +M P+ +F S + +C + L G+
Sbjct: 67 SPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGES 126
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H + ++ G + GN+L++MY K+ V+ ++VS+N +IAG+ ++
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGM 186
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
E + + M L PD F+ + L I S D+ KG +H ++ ++S+ ++G++
Sbjct: 187 YEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSS 246
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y+K I ++E+ F + +D ISWN+ +A Y + L +F++M + VRP
Sbjct: 247 LVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAK-VRP 305
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
F+S++ ACA LA++ GKQ+H +++R +++ + +ALV+MY+KCG I + K+F
Sbjct: 306 GAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIF 365
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ M + VSW II HA H G A+ LFE+MK G+KP+ V F+ +LTAC+H GLV
Sbjct: 366 DRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD 425
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
E YFNSM K YG++ ++EH+ + DLLGRAGKL EA ++ K + V TLLS+
Sbjct: 426 EAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSS 485
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
C + +++ + E++A+++F + YVL+ N+YAS+G W ++A R ++ GL+K+P
Sbjct: 486 CSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKP 545
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ S IE++ F + SH + IN LK +
Sbjct: 546 ACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAV 579
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 118/214 (55%), Gaps = 3/214 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++SS+L S+ + +G +H V++ GI DV + + ++++YAK ++ + +VF
Sbjct: 206 AFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 265
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
+ R+ +SW+++++G+ Q G + AL F QM + P F+S I ACA + +L
Sbjct: 266 HLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHL 325
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+Q+H Y L+ G+ F+ ++L+ MY K G A ++ + VS+ A+I G
Sbjct: 326 GKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHAL 385
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
+ + +F+ M RQG+ P++ +F L CS
Sbjct: 386 HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACS 419
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + SS++ C+ L G LH VL+ G ++ +++ ++++Y+KCG + ARK+FD
Sbjct: 307 AVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFD 366
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGI 113
M+ + VSW+A+I GH G A+ F +M + PN+ F + ++AC+ +
Sbjct: 367 RMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHV 421
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 200/567 (35%), Positives = 320/567 (56%), Gaps = 10/567 (1%)
Query: 19 QQGISLHAAVLKMGIQPD-VIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
++G +HA V++ G+ + V + N ++N+YAK G + A VF+ M E++ VSW+++ISG
Sbjct: 876 RKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISG 935
Query: 78 HHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
Q A E F +M +P+ + S +S+CA + ++ G+QIH LK G +
Sbjct: 936 LDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTD 995
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP-EKGFEVFKLML 193
V N+L+++Y + G ++ L V+ E + VS+N++I +++ + + F M+
Sbjct: 996 VSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMM 1055
Query: 194 RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
R G R +F L S + +H L +K L + +GN +++ Y K +
Sbjct: 1056 RGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMN 1115
Query: 254 EAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
E EK F R+ E +D +SWN+ I+ H K + + M G R D FTFA++L+A
Sbjct: 1116 ECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQ-KGQRLDSFTFATVLSA 1174
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
CA +A+++ G ++HA IR + DV VG+ALV+MY+KCG I + + F M RNV SW
Sbjct: 1175 CASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSW 1234
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVT-FIGLLTACNHAGLVKEGEAYFNSME 431
N++I+ +A H G ALKLF +M G PD V +G+L+AC+H G V+EG +F SM
Sbjct: 1235 NSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMS 1294
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA-CRLR-RDVV 489
+ Y +SP +EHF+C++DLLGRAGKL E ++ P+ + ++ T+L A CR R+
Sbjct: 1295 EVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTE 1354
Query: 490 IGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQ 549
+G R A+ L L+P YVLL+N+YAS W DVA AR +K++ +KKE S + ++
Sbjct: 1355 LGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARXAMKEAAVKKEAGCSWVTMK 1414
Query: 550 GTFEKFTVAEFSHSKIGEINYMLKTLS 576
F + H + I L+ L+
Sbjct: 1415 DGVHVFVAGDKLHPEKDXIYDKLRELN 1441
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 135/474 (28%), Positives = 236/474 (49%), Gaps = 20/474 (4%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+++ SL++ + ++ LH +K G ++ +SN ++N+Y + G + A+K+FD
Sbjct: 544 SETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFD 603
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISAC--AGIQSL 116
EMS RNLV+W+ +ISG+ Q G+ A F M +PN Y F SA+ AC +G
Sbjct: 604 EMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGC 663
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMK-VGYSSDALLVYGEAFEPNLVSFNALIAG 175
G QIH K Y S V N LISMY + ++DA V+ N +S+N++I+
Sbjct: 664 KLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISV 723
Query: 176 FVENQQPEKGFEVFKLMLRQGL----LPDRFSFAGGLEICSVSNDLRKGMILHCLTV--K 229
+ +++F M ++GL P+ ++F + S D ++ L K
Sbjct: 724 YSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEK 783
Query: 230 CKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSV 289
+ +VG+ +++ +++F L +A+ F + ++++S N + E V
Sbjct: 784 SGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKV 843
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQH----GKQIHAHLIRMRLNQD-VGVGNAL 344
F EM + G+ D ++ +L+A + + ++ G+++HAH+IR LN + V +GN L
Sbjct: 844 FHEMKDLVGINSD--SYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGL 901
Query: 345 VNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDS 404
VNMYAK G I+ + +F M+ ++ VSWN++I+ + A + F +M+ TG P +
Sbjct: 902 VNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSN 961
Query: 405 VTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLE 458
T I L++C G + GE K G+ D+ L+ L G E
Sbjct: 962 FTLISTLSSCASLGWIMLGEQIHCDGLK-LGLDTDVSVSNALLALYAETGCFTE 1014
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 181/341 (53%), Gaps = 17/341 (4%)
Query: 96 LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL 155
L + F S I+ G + +++H S+K+G+ F+ N+LI++Y+++G A
Sbjct: 540 LFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQ 599
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVS- 214
++ E NLV++ LI+G+ +N +P++ F+ M+R G +P+ ++F L C S
Sbjct: 600 KLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 659
Query: 215 -NDLRKGMILHCLTVKCKLESNPFVGNTIMALY-SKFNLIGEAEKAFRLIEEKDLISWNT 272
+ + G+ +H L K + S+ V N ++++Y S + +A F I ++ ISWN+
Sbjct: 660 PSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNS 719
Query: 273 FIAACSHCADYEKGLSVFKEMSND---HGVRPDDFTFAS-ILAACAGLASVQHG----KQ 324
I+ S D +F M + +P+++TF S I AAC +SV G +Q
Sbjct: 720 IISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAAC---SSVDFGLCVLEQ 776
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
+ A + + QD+ VG+ALV+ +A+ GL + +F +M RNVVS N ++ +
Sbjct: 777 MLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQ 836
Query: 385 GGSALKLFEQMKA-TGIKPDSVTFIGLLTACNHAGLVKEGE 424
G +A K+F +MK GI DS ++ LL+A + +++EG
Sbjct: 837 GEAAAKVFHEMKDLVGINSDS--YVVLLSAFSEFSVLEEGR 875
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 205/406 (50%), Gaps = 14/406 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S L C+ + G +H LK+G+ DV VSN +L LYA+ G KVF M
Sbjct: 963 TLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLM 1022
Query: 64 SERNLVSWSAMISGHHQAGEHL-LALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
E + VSW+++I + + A+++F +M + F + +SA + +
Sbjct: 1023 PEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVS 1082
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEP-NLVSFNALIAGFVE 178
QIHA LK+ + + +GN+L+S Y K G ++ ++ E + VS+N++I+G++
Sbjct: 1083 HQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIH 1142
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N+ K ++ M+++G D F+FA L C+ L +GM +H ++ +ES+ V
Sbjct: 1143 NELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVV 1202
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
G+ ++ +YSK I A + F L+ +++ SWN+ I+ + EK L +F M D G
Sbjct: 1203 GSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLD-G 1261
Query: 299 VRPDDFT-FASILAACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKCGLISC 356
PD +L+AC+ + V+ G + + + RL+ V + +V++ + G +
Sbjct: 1262 QPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDE 1321
Query: 357 SYKLFNEM-LHRNVVSWNTIIAA--HANHR---LGGSALKLFEQMK 396
N M + NV+ W T++ A AN R LG A ++ +++
Sbjct: 1322 VGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELE 1367
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 188/577 (32%), Positives = 313/577 (54%), Gaps = 12/577 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S++ C+ + + G LHA V+K+ +I N ++ +Y + +M A +VF + +
Sbjct: 173 SIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMK 232
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISACAGIQSLVKGQQI 122
+L+SWS++I+G Q G AL +M PNEYIF S++ AC+ + G QI
Sbjct: 233 DLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQI 292
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H +K A + G SL MY + G+ + A V+ + P+ S+N +IAG N
Sbjct: 293 HGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYA 352
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
++ VF M G +PD S L + L +GM +H +K ++ V N++
Sbjct: 353 DEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSL 412
Query: 243 MALYSKFNLIGEAEKAFRLIEE----KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
+ +Y+ + F L E+ D +SWNT + AC + L +FK M
Sbjct: 413 LTMYT---FCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSE- 468
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
PD T ++L C ++S++ G Q+H + ++ L + + N L++MYAKCG + +
Sbjct: 469 CEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQAR 528
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
++F+ M +R+VVSW+T+I +A G AL LF++MK+ GI+P+ VTF+G+LTAC+H G
Sbjct: 529 RIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVG 588
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV+EG + +M+ +GISP EH +C++DLL RAG+L EAE + + L D +V TL
Sbjct: 589 LVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTL 648
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
LSAC+ + +V + ++ A+ + + P ++ +VLL +++AS G W + A R +K +K
Sbjct: 649 LSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVK 708
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
K P S IE++ F + H + +I +L +
Sbjct: 709 KIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNI 745
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 147/460 (31%), Positives = 243/460 (52%), Gaps = 7/460 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
SL+ CS +++L QG +H +L + D I++NH+L++Y KCG + AR+VFD M ER
Sbjct: 72 SLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPER 131
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
NLVS++++I+G+ Q G+ A+ + +M L+P+++ F S I ACA + G+Q+H
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLH 191
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A +K +S N+LI+MY++ SDA V+ +L+S++++IAGF +
Sbjct: 192 AQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEF 251
Query: 184 KGFEVFKLMLRQGLL-PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
+ K ML G+ P+ + F L+ CS G +H L +K +L N G ++
Sbjct: 252 EALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSL 311
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+Y++ + A + F IE D SWN IA ++ ++ +SVF +M + G PD
Sbjct: 312 CDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSS-GFIPD 370
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+ S+L A ++ G QIH+++I+ D+ V N+L+ MY C + C + LF
Sbjct: 371 AISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFE 430
Query: 363 EMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ + + VSWNTI+ A H L+LF+ M + +PD +T LL C +K
Sbjct: 431 DFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLK 490
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
G KT G++P+ LID+ + G L +A
Sbjct: 491 LGSQVHCYSLKT-GLAPEQFIKNGLIDMYAKCGSLGQARR 529
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/394 (30%), Positives = 204/394 (51%), Gaps = 1/394 (0%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+ S I AC+ +SL +G++IH + L + + N ++SMY K G DA V+
Sbjct: 70 YISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMP 129
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
E NLVS+ ++I G+ +N Q + ++ ML++ L+PD+F+F ++ C+ S+D+ G
Sbjct: 130 ERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQ 189
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
LH +K + S+ N ++A+Y +FN + +A + F I KDLISW++ IA S
Sbjct: 190 LHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGF 249
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
+ LS KEM + P+++ F S L AC+ L +G QIH I+ L + G
Sbjct: 250 EFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGC 309
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
+L +MYA+CG ++ + ++F+++ + SWN IIA AN+ A+ +F QM+++G P
Sbjct: 310 SLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIP 369
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
D+++ LL A + +G + + K +G D+ L+ + L
Sbjct: 370 DAISLRSLLCAQTKPMALSQGMQIHSYIIK-WGFLADLTVCNSLLTMYTFCSDLYCCFNL 428
Query: 463 TKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAK 496
+ F D + T+L+AC V RL K
Sbjct: 429 FEDFRNNADSVSWNTILTACLQHEQPVEMLRLFK 462
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 143/285 (50%), Gaps = 12/285 (4%)
Query: 2 AKSISSLLHHCSKTK--ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKV 59
A S+ SLL C++TK AL QG+ +H+ ++K G D+ V N +L +Y C + +
Sbjct: 371 AISLRSLL--CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNL 428
Query: 60 FDEMSER-NLVSWSAMISG---HHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQS 115
F++ + VSW+ +++ H Q E L + P+ + + C I S
Sbjct: 429 FEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISS 488
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
L G Q+H YSLK G A F+ N LI MY K G A ++ ++VS++ LI G
Sbjct: 489 LKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVG 548
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+ ++ E+ +FK M G+ P+ +F G L CS + +G+ L+ T++ + +
Sbjct: 549 YAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYA-TMQTEHGIS 607
Query: 236 PFVG--NTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAAC 277
P + ++ L ++ + EAE+ ++ E D++ W T ++AC
Sbjct: 608 PTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSAC 652
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
Y + L F + + T+ S++ AC+ S+ G++IH H++ D + N
Sbjct: 47 YREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNN 106
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
+++MY KCG + + ++F+ M RN+VS+ ++I ++ + G A++L+ +M + P
Sbjct: 107 HILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVP 166
Query: 403 DSVTFIGLLTAC---NHAGLVKEGEAYFNSMEKT 433
D F ++ AC + GL K+ A +E +
Sbjct: 167 DQFAFGSIIKACASSSDVGLGKQLHAQVIKLESS 200
>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 178/548 (32%), Positives = 306/548 (55%), Gaps = 4/548 (0%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
LHA V++ G DV ++N +LN+Y KCG++ A+ +F+ M R+++SW++++SG+ Q G
Sbjct: 168 LHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGN 227
Query: 84 HLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
L+ +M + P++ F S +SA A L G+ +H + L+ G S + S
Sbjct: 228 IREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETS 287
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
LI MY+K G + A ++ +++S+ A+I+G V+N + VF+ ML+ ++P
Sbjct: 288 LIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPS 347
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+ A L C+ G +H ++ +++ + N+++ +Y+K + ++ F
Sbjct: 348 TATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFD 407
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ +D++SWN ++ + K L +F EM RPD T S+L ACA + ++
Sbjct: 408 RMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQ-RPDSITVVSLLQACASIGALH 466
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
GK IH + + L + + ALV+MY+KCG + + K F+ M +++VSW++IIA +
Sbjct: 467 QGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYG 526
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
+H G +AL+++ TGI+P+ V ++ +L+AC+H GLV +G ++F+SM K +GI P +
Sbjct: 527 SHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRL 586
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH 500
EH C++DLL RAG++ EA + K+ VLG LL ACR +V +G+ +A+++
Sbjct: 587 EHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVI 646
Query: 501 LQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEF 560
L+P YV L++ YAS W V +K LKK P +S IE+ GT F
Sbjct: 647 LKPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHS 706
Query: 561 SHSKIGEI 568
SH + EI
Sbjct: 707 SHPQFEEI 714
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 149/487 (30%), Positives = 260/487 (53%), Gaps = 19/487 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + SL+ C+ G+S H V+ G D ++ ++N Y+K G ARKVFD
Sbjct: 48 AHTFPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFD 107
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISA---CAGIQSLVK 118
M +RN+V W+ MI + +AGEH +A FS +++ + I S+++ +G+ LV
Sbjct: 108 TMDDRNVVPWTTMIGCYTRAGEHDVA---FSMYNIMRRQGIQPSSVTMLGLLSGVLELVH 164
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
Q +HA +++G+ S + NS++++Y K G DA ++ +++S+N+L++G+ +
Sbjct: 165 LQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQ 224
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ ++ M G+ PD+ +F + ++ + L G ++H ++ LE + +
Sbjct: 225 LGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHI 284
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIE---EKDLISWNTFIAAC--SHCADYEKGLSVFKEM 293
+++ +Y K G AFR+ E KD+ISW I+ + CAD ++VF+ M
Sbjct: 285 ETSLIGMYLK---CGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADM--AVTVFRRM 339
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
V P T AS+LAACA L S G +H +++R R+ D+ N+LV MYAKCG
Sbjct: 340 LKSR-VMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGH 398
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ S +F+ M R++VSWN I++ HA + AL LF +M+ +PDS+T + LL A
Sbjct: 399 LEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQA 458
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C G + +G+ N + K+ + P I T L+D+ + G L A++ + P QD +
Sbjct: 459 CASIGALHQGKWIHNFVTKSC-LGPCILIDTALVDMYSKCGDLGSAQKCFDRMP-QQDLV 516
Query: 474 VLGTLLS 480
++++
Sbjct: 517 SWSSIIA 523
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 194/393 (49%), Gaps = 8/393 (2%)
Query: 70 SWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYS 126
S++A+I+ AG L +S M P+ + F S + AC + G H
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
+ GY+S S++ SLI+ Y K G++ A V+ + N+V + +I + + + F
Sbjct: 75 IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
++ +M RQG+ P + G L S +L LH ++ S+ + N+++ +Y
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLL---SGVLELVHLQCLHACVIQYGFGSDVALANSMLNVY 191
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
K + +A+ F L++ +D+ISWN+ ++ + + + L + M D G+ PD TF
Sbjct: 192 CKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTD-GIEPDQQTF 250
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
S+++A A + + GK +H H++R L QD + +L+ MY KCG ++ ++++F M+H
Sbjct: 251 GSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMH 310
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
++V+SW +I+ + A+ +F +M + + P + T +L AC G G +
Sbjct: 311 KDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSV 370
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+ + I DI L+ + + G L ++
Sbjct: 371 HGYILRQR-IKLDIPSQNSLVTMYAKCGHLEQS 402
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 69/111 (62%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ SLL C+ AL QG +H V K + P +++ ++++Y+KCG + A+K FD M
Sbjct: 451 TVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRM 510
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQ-MH--LLPNEYIFASAISACA 111
+++LVSWS++I+G+ G+ AL +S +H + PN I+ S +SAC+
Sbjct: 511 PQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACS 561
>gi|15223562|ref|NP_176050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173051|sp|Q9FXA9.1|PPR83_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g56570
gi|9954755|gb|AAG09106.1|AC009323_17 Hypothetical protein [Arabidopsis thaliana]
gi|332195289|gb|AEE33410.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 611
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 180/529 (34%), Positives = 308/529 (58%), Gaps = 9/529 (1%)
Query: 37 VIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM-- 94
++ +N +++ + K G + AR +FDEM +R++V+W+AMI+G+ + + A E F +M
Sbjct: 46 ILATNLIVSYFEK-GLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVK 104
Query: 95 -HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSD 153
PNE+ +S + +C ++ L G +H +K G +V N++++MY + +
Sbjct: 105 QGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTME 164
Query: 154 A-LLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
A L++ + N V++ LI GF G +++K ML + + + +
Sbjct: 165 AACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASA 224
Query: 213 VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNT 272
+ + G +H +K +SN V N+I+ LY + + EA+ F +E+KDLI+WNT
Sbjct: 225 SIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNT 284
Query: 273 FIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
I+ +D + L +F+ + G P+ +TF S++AACA +A++ G+Q+H + R
Sbjct: 285 LISELER-SDSSEALLMFQRFES-QGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRR 342
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEML-HRNVVSWNTIIAAHANHRLGGSALKL 391
N++V + NAL++MYAKCG I S ++F E++ RN+VSW +++ + +H G A++L
Sbjct: 343 GFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVEL 402
Query: 392 FEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLG 451
F++M ++GI+PD + F+ +L+AC HAGLV++G YFN ME YGI+PD + + C++DLLG
Sbjct: 403 FDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLG 462
Query: 452 RAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERL-AKQLFHLQPTTTSPYV 510
RAGK+ EA E ++ P D G +L AC+ + + RL A+++ L+P YV
Sbjct: 463 RAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYV 522
Query: 511 LLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAE 559
+LS +YA++G W D A RKM++ G KKE S I V+ F V++
Sbjct: 523 MLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSD 571
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 210/415 (50%), Gaps = 11/415 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCG-KMILARKVFDE 62
++SS+L C K L G +H V+K+G++ + V N ++N+YA C M A +F +
Sbjct: 113 TLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRD 172
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNE---YIFASAISACAGIQSLVKG 119
+ +N V+W+ +I+G G+ + L+ + QM L E Y A+ A A I S+ G
Sbjct: 173 IKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTG 232
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+QIHA +K G+ S V NS++ +Y + GY S+A + E + +L+++N LI+ +E
Sbjct: 233 KQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISE-LER 291
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ +F+ QG +P+ ++F + C+ L G LH + N +
Sbjct: 292 SDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELA 351
Query: 240 NTIMALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N ++ +Y+K I ++++ F +++ ++L+SW + + + + +F +M + G
Sbjct: 352 NALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSS-G 410
Query: 299 VRPDDFTFASILAACAGLASVQHG-KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
+RPD F ++L+AC V+ G K + +N D + N +V++ + G I +
Sbjct: 411 IRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEA 470
Query: 358 YKLFNEMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV-TFIGL 410
Y+L M + + +W I+ A H+ G +L + K +KP V T++ L
Sbjct: 471 YELVERMPFKPDESTWGAILGACKAHKHNGLISRLAAR-KVMELKPKMVGTYVML 524
>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
Length = 1068
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 196/557 (35%), Positives = 307/557 (55%), Gaps = 7/557 (1%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L GI LH G V+V+N +L +YAK + A +VF M+E+++VSWS+MI+G
Sbjct: 415 LDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAG 474
Query: 78 HHQAGEHLLALEFFSQM--HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS 135
AL +F M H+ PN F +A+SACA +L G++IHAY L+ G S
Sbjct: 475 FCFNHRSFDALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEG 534
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
+V N+L+ +Y+K G +S A + E ++VS+N +++GFV + + +F M+
Sbjct: 535 YVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYT 594
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
L R L C+ L G+ LH L V N ++ +Y+K I +A
Sbjct: 595 SL--GRMGACSALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKA 652
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
+ F+ + EKD++SW++ IA L F+ M V+P+ TF + L+ACA
Sbjct: 653 IEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLGH--VKPNSVTFIAALSACAA 710
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
+++ GK+IHA+++R + + V NAL+++Y KCG S ++ F+ ++VVSWN +
Sbjct: 711 TGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIM 770
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYG 435
++ H LG AL LF QM G PD VTF+ L+ AC+ AG+V +G F+ + +
Sbjct: 771 LSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFV-LMCACSRAGMVIQGWELFHRRTEKFS 829
Query: 436 ISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLA 495
I P+++H+ C++DLL R GKL EA + P+ D V G LL+ CR+ R V +GE A
Sbjct: 830 IVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAA 889
Query: 496 KQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKF 555
K + L+P + +VLL +LY G W VA RK +++ GL+++ S +EV+G F
Sbjct: 890 KVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAF 949
Query: 556 TVAEFSHSKIGEINYML 572
+ SH +I EIN +L
Sbjct: 950 LTDDESHPQIKEINVVL 966
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 129/400 (32%), Positives = 210/400 (52%), Gaps = 5/400 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +L C + G +HA VL+ G +V V N ++ +YAKCG ++ ARKVFD M
Sbjct: 199 TFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGM 258
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ + +SW+AMI+GH + E LE F M + PN S A + + +
Sbjct: 259 AMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAK 318
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H +++K G+A NSLI MY +G DA ++ + +S+ A+I+G+ +N
Sbjct: 319 EMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNG 378
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
P+K EV+ LM + PD + A L C+ L G+ LH L V N
Sbjct: 379 FPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVAN 438
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y+K I +A + F+ + EKD++SW++ IA L F+ M V+
Sbjct: 439 ALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLGH--VK 496
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P+ TF + L+ACA +++ GK+IHA+++R + + V NAL+++Y KCG S ++
Sbjct: 497 PNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQ 556
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGI 400
F+ ++VVSWN +++ H LG AL LF QM T +
Sbjct: 557 FSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSL 596
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/422 (30%), Positives = 212/422 (50%), Gaps = 7/422 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+L C +A+ G+ A + + N +L++ + G++ A +VF +M ER
Sbjct: 101 ALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPER 160
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
++ SW+ M+ G+ + G AL+ + +M + P+ Y F + C GI G+++H
Sbjct: 161 DVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVH 220
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A+ L+FG+ V N+L++MY K G A V+ + +S+NA+IAG EN + E
Sbjct: 221 AHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAGHFENHECE 280
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
G E+F ML + P+ + + +++ +H VK + N+++
Sbjct: 281 AGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLI 340
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+ +G+A K F +E KD +SW I+ +K L V+ M H V PDD
Sbjct: 341 QMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMEL-HNVNPDD 399
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T AS LAACA L + G ++H + V V NAL+ MYAK I + ++F
Sbjct: 400 VTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKF 459
Query: 364 MLHRNVVSWNTIIAAHA-NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
M ++VVSW+++IA NHR AL F M +KP+SVTFI L+AC G ++
Sbjct: 460 MAEKDVVSWSSMIAGFCFNHR-SFDALYYFRYMLGH-VKPNSVTFIAALSACAATGALRS 517
Query: 423 GE 424
G+
Sbjct: 518 GK 519
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 75/161 (46%), Gaps = 1/161 (0%)
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD+ + ++ C +V G + A + + +GNA+++M + G I ++++
Sbjct: 94 PDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRV 153
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F +M R+V SWN ++ + AL L+ +M G++PD TF +L C
Sbjct: 154 FAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDW 213
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ G + + +G +++ L+ + + G ++ A +
Sbjct: 214 RMGREVHAHVLR-FGFGDEVDVLNALVTMYAKCGDIVAARK 253
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 193/559 (34%), Positives = 303/559 (54%), Gaps = 4/559 (0%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G+ LHA + G ++ V++ +++LY K ++ ARKVFD+M +R+ V W+ MI+G +
Sbjct: 122 GMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVR 181
Query: 81 AGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
+ +++ F M + + A+ + A A +Q + G I +LK G+ +V
Sbjct: 182 NCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYV 241
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
LIS++ K A L++G +P+LVS+NALI+GF N + E + F+ +L G
Sbjct: 242 LTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQ 301
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
+ G + + S L + VK P V + +YS+ N I A +
Sbjct: 302 RVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQ 361
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F EK + +WN I+ + E +S+F+EM P+ T SIL+ACA L
Sbjct: 362 LFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTE-FTPNPVTITSILSACAQLG 420
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
++ GK +H + L Q++ V AL++MYAKCG IS + +LF+ +N V+WNT+I
Sbjct: 421 ALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIF 480
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
+ H G ALKLF +M G +P SVTF+ +L AC+HAGLV+EG+ F++M Y I
Sbjct: 481 GYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIE 540
Query: 438 PDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQ 497
P EH+ C++D+LGRAG+L +A E+ +K P+ P V GTLL AC + +D + +++
Sbjct: 541 PLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASER 600
Query: 498 LFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTV 557
LF L P YVLLSN+Y+ + + A R+ +K L K P ++IEV GT F
Sbjct: 601 LFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVC 660
Query: 558 AEFSHSKIGEINYMLKTLS 576
+ SHS+ I L+ L+
Sbjct: 661 GDRSHSQTTSIYAKLEELT 679
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 189/388 (48%), Gaps = 8/388 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ +++++L ++ + ++ G+ + LK+G D V ++++++KC + AR +F
Sbjct: 204 STTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFG 263
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQS----LV 117
+ + +LVS++A+ISG GE A+++F ++ L+ + + +S + + S L
Sbjct: 264 MIRKPDLVSYNALISGFSCNGETECAVKYFREL-LVSGQRVSSSTMVGLIPVSSPFGHLH 322
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
I + +K G V +L ++Y ++ A ++ E+ E + ++NA+I+G+
Sbjct: 323 LACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYA 382
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
++ E +F+ M+ P+ + L C+ L G +H L LE N +
Sbjct: 383 QSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIY 442
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V ++ +Y+K I EA + F L EK+ ++WNT I ++ L +F EM +
Sbjct: 443 VSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLH-L 501
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQI-HAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
G +P TF S+L AC+ V+ G +I HA + + R+ +V++ + G +
Sbjct: 502 GFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEK 561
Query: 357 SYKLFNEM-LHRNVVSWNTIIAAHANHR 383
+ + +M + W T++ A H+
Sbjct: 562 ALEFIRKMPVEPGPAVWGTLLGACMIHK 589
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 4/291 (1%)
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+ HA ++ GY L VG + A ++ +P++ FN LI GF +
Sbjct: 26 ETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFSFSP 85
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
L+ L PD F++A + S S D GM LH V +SN FV +
Sbjct: 86 DASSISFYTHLLKNTTLSPDNFTYAFAI---SASPDDNLGMCLHAHAVVDGFDSNLFVAS 142
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ LY KF+ + A K F + ++D + WNT I Y+ + VFK+M GVR
Sbjct: 143 ALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVA-QGVR 201
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D T A++L A A + V+ G I +++ + D V L+++++KC + + L
Sbjct: 202 LDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLL 261
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
F + ++VS+N +I+ + + A+K F ++ +G + S T +GL+
Sbjct: 262 FGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLI 312
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 191/576 (33%), Positives = 317/576 (55%), Gaps = 8/576 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+IS+LL C + L+ G LH V+K G++ +V V N +L++Y++ GK A VF +M
Sbjct: 263 TISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKM 322
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
ER+L+SW++M++ H G + ALE +M N F +A+SAC +++L +
Sbjct: 323 RERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETL---K 379
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+HA+ + G +GN+L++MY K G + A V + + V++NALI G +N+
Sbjct: 380 IVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNK 439
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDL-RKGMILHCLTVKCKLESNPFVG 239
+P E F L+ +G+ + + L +DL GM +H V E FV
Sbjct: 440 EPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQ 499
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++++ +Y++ + + F ++ K+ +WN ++A +H E+ L + +M ND G+
Sbjct: 500 SSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRND-GI 558
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
D F+F+ A L + G+Q+H+ +I+ + V NA ++MY KCG I ++
Sbjct: 559 HLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFR 618
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+ + R+ SWN +I+A A H A + F +M G++PD VTF+ LL+AC+H GL
Sbjct: 619 ILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGL 678
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V EG AYF+SM +G+ IEH C+IDLLGRAGKL EAE + K P+ +V +LL
Sbjct: 679 VDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLL 738
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
+AC++ ++ + + A +LF L + S YVL SN+ AS W DV RK ++ +KK
Sbjct: 739 AACKIHGNLELARKAADRLFELDSSDDSAYVLYSNVCASTRRWRDVENVRKQMESHNIKK 798
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+P+ S ++++ F + + H + EI L+ L
Sbjct: 799 KPACSWVKLKNQVTTFGMGDQYHPQNAEIYAKLEEL 834
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 233/438 (53%), Gaps = 10/438 (2%)
Query: 46 LYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYI 102
+Y+K G + A+ VFD+M ERN SW+ ++SG + G + A++FF M + P+ Y+
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 103 FASAISACAGIQSLVKGQ-QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA 161
AS ++AC + +G Q+HA+ +K G A FVG SL+ Y G+ ++ +V+ E
Sbjct: 61 AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
EPN+VS+ +L+ G+ N ++ V++ + R G+ + + A + C V D G
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
+ +K L++ V N++++++ + I EA F ++E+D ISWN+ I A H
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNG 240
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
EK L F +M H + D T +++L C +++ G+ +H +++ L +V V
Sbjct: 241 HCEKSLEYFSQMRYTHA-KTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVC 299
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
N+L++MY++ G + +F++M R+++SWN+++A+H ++ AL+L +M T
Sbjct: 300 NSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKA 359
Query: 402 PDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ VTF L+AC + +K A+ + G+ ++ L+ + G+ G + A+
Sbjct: 360 TNYVTFTTALSACYNLETLKIVHAFVILL----GLHHNLIIGNALVTMYGKFGSMAAAQR 415
Query: 462 YTKKFPLGQDPIVLGTLL 479
K P +D + L+
Sbjct: 416 VCKIMP-DRDEVTWNALI 432
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 141/517 (27%), Positives = 253/517 (48%), Gaps = 41/517 (7%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++++++ C G + +V+K G+ V V+N +++++ C + A VFD+
Sbjct: 161 NAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDD 220
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL--PNEYIFASA-ISACAGIQSLVKG 119
M ER+ +SW+++I+ G +LE+FSQM +YI SA + C Q+L G
Sbjct: 221 MKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWG 280
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ +H +K G S V NSL+SMY + G S DA V+ + E +L+S+N+++A V+N
Sbjct: 281 RGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDN 340
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ E+ ML+ + +F L C +L I+H + L N +G
Sbjct: 341 GNYPRALELLIEMLQTRKATNYVTFTTALSACY---NLETLKIVHAFVILLGLHHNLIIG 397
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N ++ +Y KF + A++ +++ ++D ++WN I + + + F + + GV
Sbjct: 398 NALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFN-LLREEGV 456
Query: 300 RPDDFTFASILAACAGLAS-VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ T ++L+A + HG IHAH++ + V ++L+ MYA+CG ++ S
Sbjct: 457 PVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSN 516
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTF------IGLLT 412
+F+ + ++N +WN I++A+A++ G ALKL +M+ GI D +F IG LT
Sbjct: 517 YIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLT 576
Query: 413 ACN-----HAGLVKEG----EAYFNSMEKTYGISPDIEH---------------FTCLID 448
+ H+ ++K G + N+ YG +I+ + LI
Sbjct: 577 LLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILIS 636
Query: 449 LLGRAGKLLEAEE-YTKKFPLGQDP--IVLGTLLSAC 482
L R G +A E + + LG P + +LLSAC
Sbjct: 637 ALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSAC 673
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 216/412 (52%), Gaps = 8/412 (1%)
Query: 6 SSLLHHCSKTKALQQG-ISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+SL+ C ++ + +G +HA V+K G+ DV V +L+ Y G + VF E+
Sbjct: 62 ASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIE 121
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQ 121
E N+VSW++++ G+ G + + ++ + NE A+ I +C + + G Q
Sbjct: 122 EPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQ 181
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+ +K G + V NSLISM+ +A V+ + E + +S+N++I V N
Sbjct: 182 VLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGH 241
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
EK E F M D + + L +C + +LR G LH + VK LESN V N+
Sbjct: 242 CEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNS 301
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++++YS+ +AE F + E+DLISWN+ +A+ +Y + L + EM
Sbjct: 302 LLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKA-T 360
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
+ TF + L+AC L ++ K +HA +I + L+ ++ +GNALV MY K G ++ + ++
Sbjct: 361 NYVTFTTALSACYNLETL---KIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVC 417
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
M R+ V+WN +I HA+++ +A++ F ++ G+ + +T + LL+A
Sbjct: 418 KIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSA 469
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 186/568 (32%), Positives = 320/568 (56%), Gaps = 4/568 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + +L C+ G LH V+ G + D V+N ++ +Y+KCG ++ ARK+F+ M
Sbjct: 215 TYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTM 274
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ + V+W+ +I+G+ Q G A F+ M + P+ FAS + + SL +
Sbjct: 275 PQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCK 334
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H+Y ++ ++ ++LI +Y K G A ++ + ++ A+I+G+V +
Sbjct: 335 EVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHG 394
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
F+ ++++G++ + + A L C+ L+ G LHC +K +LE+ VG+
Sbjct: 395 LNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGS 454
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
I +Y+K + A + FR + ++D + WN+ I++ S E + +F++M G +
Sbjct: 455 AITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMS-GAK 513
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D + +S L+A A L ++ +GK++H ++IR + D V + L++MY+KCG ++ ++ +
Sbjct: 514 FDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCV 573
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN M +N VSWN+IIAA+ NH L L+ +M GI PD VTF+ +++AC HAGLV
Sbjct: 574 FNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLV 633
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG YF+ M + YGI +EH+ C++DL GRAG++ EA + K P D V GTLL
Sbjct: 634 DEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLG 693
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACRL +V + + ++ L L P + YVLLSN++A G W V R ++K+ G++K
Sbjct: 694 ACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWASVLKVRSLMKEKGVQKI 753
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
P YS I+V G F+ A+ +H + EI
Sbjct: 754 PGYSWIDVNGGTHMFSAADGNHPESVEI 781
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 127/485 (26%), Positives = 237/485 (48%), Gaps = 8/485 (1%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
+ + SL CS +QQ +H V+ G+ S+ VL LY CG+ A +F
Sbjct: 10 LTTQLESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLF 69
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLV 117
E+ R + W+ MI G + G AL F+ +M ++ P++Y F I AC G+ ++
Sbjct: 70 FELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVP 129
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+H + G+ F G++LI +Y GY DA V+ E + + +N ++ G+V
Sbjct: 130 LCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYV 189
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
++ + F M + + ++ L IC+ + G LH L + E +P
Sbjct: 190 KSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQ 249
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V NT++A+YSK + A K F + + D ++WN IA ++ +F M +
Sbjct: 250 VANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMIS-A 308
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
GV+PD TFAS L + S++H K++H++++R R+ DV + +AL+++Y K G + +
Sbjct: 309 GVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMA 368
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
K+F + + +V +I+ + H L A+ F + G+ +S+T +L AC
Sbjct: 369 RKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAV 428
Query: 418 GLVKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
+K G E + + ++K + + + + D+ + G+L A E+ ++ +D +
Sbjct: 429 AALKPGKELHCHILKKR--LENIVNVGSAITDMYAKCGRLDLAYEFFRRMS-DRDSVCWN 485
Query: 477 TLLSA 481
+++S+
Sbjct: 486 SMISS 490
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 195/549 (35%), Positives = 308/549 (56%), Gaps = 16/549 (2%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM- 94
DV V +++++A+ G ++ ARKVF+ + ER +V W+ MI+ + Q G A+E F M
Sbjct: 182 DVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGML 241
Query: 95 --HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSS 152
P+ Y +S +SACA S GQQ+H+ L+ G S + V L+ MY K+
Sbjct: 242 EDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQ 301
Query: 153 D---ALLVYGEAFEPNLVSFNALIAGFVE-NQQPEKGFEVFKLMLRQGLLPDRFSFAGGL 208
A V+ N++S+ ALI+G+V+ Q E+ ML + + P+ +++ L
Sbjct: 302 SMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLL 361
Query: 209 EICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLI 268
+ C+ +D G +H +K + + VGN ++++Y++ + EA KAF + E++L+
Sbjct: 362 KACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLL 421
Query: 269 SWNTFIAACSHC-ADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHA 327
S ++ I A + + S D GV FTFAS+L+A A + G+Q+HA
Sbjct: 422 STSSDIGETGRSNASWSSQIE-----SMDVGV--STFTFASLLSAAATVGLPTKGQQLHA 474
Query: 328 HLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH-RNVVSWNTIIAAHANHRLGG 386
I+ D G+ N+LV+MY++CG + + + F+EM NV+SW +II+A A H
Sbjct: 475 LSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAE 534
Query: 387 SALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCL 446
AL LF M +G+KP+ VT+I +L+AC+H GLVKEG+ YF SM+K + + P +EH+ C+
Sbjct: 535 RALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACM 594
Query: 447 IDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTT 506
+DLL R+G + EA E+ + P D +V TLL ACR ++ IGE A+ + L+P
Sbjct: 595 VDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDP 654
Query: 507 SPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIG 566
+PYVLLSNLYA G+W +VA R +++ L KE S + V T +F + SH +
Sbjct: 655 APYVLLSNLYAHGGLWDEVARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPRAQ 714
Query: 567 EINYMLKTL 575
EI L L
Sbjct: 715 EIYAKLAVL 723
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 217/450 (48%), Gaps = 18/450 (4%)
Query: 21 GISLHAAVLKMGI-QPDVIVSNHVLNLYAKCGKMILARKVFDEMSE-RNLVSWSAMISGH 78
G +LH +L + D +V+N +L +Y+KCG + AR+VFD M R+LVSW+AM
Sbjct: 62 GRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCL 121
Query: 79 HQAGEHLLALEFFSQM---HLLPNEYIFASAISAC-AGIQSLVKGQQIHAYSLKFGYASI 134
+ G AL +M L PN + +A AC G G + +++K G+
Sbjct: 122 TRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGT 181
Query: 135 SF-VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLML 193
VG +LI M+ + G A V+ E +V + +I +V+ K E+F ML
Sbjct: 182 DVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGML 241
Query: 194 RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL-- 251
G PD ++ + + C+ G LH L ++ L S+ V ++ +Y+K +
Sbjct: 242 EDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQ 301
Query: 252 -IGEAEKAFRLIEEKDLISWNTFIAACSHCADYE-KGLSVFKEMSNDHGVRPDDFTFASI 309
+ A K F+ + +++SW I+ C E + + EM N+ + P+ T++S+
Sbjct: 302 SMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNE-SIEPNHLTYSSL 360
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
L ACA L+ G+QIHA +++ + VGNALV+MYA+ G + + K F+++ RN+
Sbjct: 361 LKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNL 420
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNS 429
+S ++ I G S Q+++ + + TF LL+A GL +G+ ++
Sbjct: 421 LSTSSDIG-----ETGRSNASWSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQ-LHA 474
Query: 430 MEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+ G D L+ + R G L +A
Sbjct: 475 LSIKTGFESDKGISNSLVSMYSRCGYLDDA 504
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 58/418 (13%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
SSLL C+ G +HA V+K I +V N ++++YA+ G M ARK FD++ E
Sbjct: 358 SSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYE 417
Query: 66 RNLVSWSAMI--SGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
RNL+S S+ I +G A M + + + FAS +SA A + KGQQ+H
Sbjct: 418 RNLLSTSSDIGETGRSNASWS----SQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLH 473
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEP-NLVSFNALIAGFVENQQP 182
A S+K G+ S + NSL+SMY + GY DA + E + N++S+ ++I+ ++
Sbjct: 474 ALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHA 533
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E+ +F M+ G+ P+ ++ L CS +++G
Sbjct: 534 ERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGK------------------EYF 575
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
++ LI E ++ DL++ + + ++ L EM + D
Sbjct: 576 RSMQKDHRLIPRMEHYACMV---DLLARSGLV---------QEALEFINEMP----CKAD 619
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+ ++L AC +++ G+ H+I + QD L N+YA GL ++ +
Sbjct: 620 ALVWKTLLGACRTYENIEIGEIAARHVIDLE-PQDPAPYVLLSNLYAHGGLWDEVARIRS 678
Query: 363 EMLHRNV-----VSW----NTIIAAHANHRLGGSALKLF-------EQMKATGIKPDS 404
M HRN+ +SW NTI A A +++ ++K G PD+
Sbjct: 679 LMRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPRAQEIYAKLAVLIREIKDIGYVPDT 736
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 69/122 (56%), Gaps = 4/122 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +SLL + +G LHA +K G + D +SN ++++Y++CG + A + FDEM
Sbjct: 452 TFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEM 511
Query: 64 -SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKG 119
+ N++SW+++IS + G AL F M L PN+ + + +SAC+ + + +G
Sbjct: 512 EDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEG 571
Query: 120 QQ 121
++
Sbjct: 572 KE 573
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 192/578 (33%), Positives = 309/578 (53%), Gaps = 10/578 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+LL + +K+L Q + LHA V G ++ + ++ + YA CG M A+ +FD++
Sbjct: 27 TLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVL 86
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM-HL--LPNEYIFASAISACAGIQSLVKGQQI 122
+N W++MI G+ AL + +M H P+ + + + AC + G+++
Sbjct: 87 KNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKV 146
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
HA + G +VGNS++SMY K G A +V+ +L S+N +++GFV+N +
Sbjct: 147 HALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEA 206
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES----NPFV 238
FEVF M R G + DR + L C DL+ G +H V+ ES N F+
Sbjct: 207 RGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVR-NGESGRVCNGFL 265
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N+I+ +Y + A K F + KD++SWN+ I+ C D + L +F M G
Sbjct: 266 MNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVV-VG 324
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
PD+ T S+LAAC +++++ G + +++++ +V VG AL+ MYA CG + C+
Sbjct: 325 AVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCAC 384
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
++F+EM +N+ + ++ H G A+ +F +M G+ PD F +L+AC+H+G
Sbjct: 385 RVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSG 444
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV EG+ F M + Y + P H++CL+DLLGRAG L EA + L + V L
Sbjct: 445 LVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTAL 504
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
LSACRL R+V + A++LF L P S YV LSN+YA++ W DV R ++ L+
Sbjct: 505 LSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRLR 564
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
K PSYS +E+ +F V + SH + +I LK L+
Sbjct: 565 KPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLN 602
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 95/176 (53%), Gaps = 5/176 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+L C++ AL+ G ++ + V+K G +V+V ++ +YA CG ++ A +VFDEM
Sbjct: 331 TVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEM 390
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
E+NL + + M++G G A+ F +M + P+E IF + +SAC+ + +G+
Sbjct: 391 PEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGK 450
Query: 121 QI-HAYSLKFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIA 174
+I + + + + L+ + + GY +A ++ +PN + AL++
Sbjct: 451 EIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLS 506
>gi|296082168|emb|CBI21173.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 197/575 (34%), Positives = 311/575 (54%), Gaps = 9/575 (1%)
Query: 9 LHHCSKTK--ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
LH S++ AL + H +K G + +N++++ YAKCG++ +A K+F E S+R
Sbjct: 4 LHSLSQSSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQR 63
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
+ VSW+ MI+G G ALEF M + Y F S + A + + GQQ+H
Sbjct: 64 DAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVH 123
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ +K GY F G++L+ MY K DA V+ N V++NALI+G+ +
Sbjct: 124 SMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRG 183
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
F + M +G+ D +FA L + + + +H VK L S+ V N I+
Sbjct: 184 TAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAII 243
Query: 244 ALYSKFNLIGEAEKAFR-LIEEKDL--ISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
YS+ I +AE+ F IE +DL +SWN+ + S E L F+ M + + V
Sbjct: 244 TAYSECGSIEDAERVFDGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQY-VV 302
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D + F+++L +C+ LA++Q G+Q+H +++ + V ++L+ MY+KCG+I + K
Sbjct: 303 IDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKS 362
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+ + ++WN++I +A H G AL LF MK +K D +TF+ +LTAC+H GLV
Sbjct: 363 FDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLV 422
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+EG ++ SME YGI P +EH+ C+IDLLGRAG+L EA+ + P D +V TLL
Sbjct: 423 EEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLG 482
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR D+ + ++A L L+P YVLLS+++ W + A ++++K+ G+KK
Sbjct: 483 ACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKV 542
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P +S IEV+ F + SH EI L L
Sbjct: 543 PGWSWIEVKNEVRSFNAEDRSHPNCEEIYLRLGEL 577
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 168/325 (51%), Gaps = 7/325 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S S+L + ++ G +H+ ++KMG + +V + +L++YAKC ++ A +VF +
Sbjct: 102 SFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSI 161
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEY---IFASAISACAGIQSLVKGQ 120
+ RN V+W+A+ISG+ Q G+ A M L E FA ++
Sbjct: 162 NIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTT 221
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEP---NLVSFNALIAGFV 177
Q+HA +K G AS + V N++I+ Y + G DA V+ A E + VS+N+++ GF
Sbjct: 222 QVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLDHVSWNSILTGFS 281
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
++ E + F+ M Q ++ D ++F+ L CS L+ G +H L +K E N F
Sbjct: 282 QSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGF 341
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V ++++ +YSK +I +A K+F + I+WN+ I + + L +F M D
Sbjct: 342 VASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLM-KDR 400
Query: 298 GVRPDDFTFASILAACAGLASVQHG 322
V+ D TF ++L AC+ + V+ G
Sbjct: 401 RVKLDHITFVAVLTACSHIGLVEEG 425
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 89/176 (50%), Gaps = 5/176 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S++L CS LQ G +H VLK G +P+ V++ ++ +Y+KCG + ARK FD
Sbjct: 307 AFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDAT 366
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ + ++W+++I G+ Q G +AL+ F M + + F + ++AC+ I + +G
Sbjct: 367 PKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGW 426
Query: 121 Q-IHAYSLKFGYASISFVGNSLISMYMKVGYSSDA-LLVYGEAFEPNLVSFNALIA 174
+ + +G +I + + G +A L+ FEP+ + + L+
Sbjct: 427 SFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLG 482
>gi|357128066|ref|XP_003565697.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Brachypodium distachyon]
Length = 564
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 178/535 (33%), Positives = 301/535 (56%), Gaps = 14/535 (2%)
Query: 51 GKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAI 107
G + AR VFDEM +R++V+W+AM+SG+ G H AL+ F +M + PNE+ +S +
Sbjct: 17 GALRHARAVFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLAAGVGPNEFTLSSVL 76
Query: 108 SACAG--IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMK----VGYSSDALLVYGEA 161
+AC G + +HA +++ G + +V N+LI Y VG L
Sbjct: 77 TACRGGAADGGCEPSSLHAVAVRRGVDHMPYVVNALIEAYASCEEGVGVEESRKLFDALG 136
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
S+ +++AG+ Q + G ++F+ M++ G+ F+ + L C+ +L G
Sbjct: 137 SGRTAASWTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSPFTCSIALHACASIANLCVGQ 196
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
LH L ++ +N V N+++ +Y + +A + F I E++L++WNT IA S C
Sbjct: 197 QLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPERNLVTWNTMIAWYSQC- 255
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
++ L + +EM+ ++P+ FT SI +ACAGLAS++ G+Q+H +R +D+ +
Sbjct: 256 NHLMALQLLREMN----LQPNCFTLTSITSACAGLASLRFGQQVHGAALRRNYGKDLQMC 311
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
NALV+MY+KCG I+ + K+FN M +++ +SW ++I + + +++LF M G+
Sbjct: 312 NALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMNGYANESIQLFTSMIHAGVH 371
Query: 402 PDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
PD V F+GL+ ACNH GLV EG +F SM Y + P+ E + C+ +LL RAG+L EA +
Sbjct: 372 PDHVVFLGLICACNHGGLVDEGWNFFRSMTSEYNLQPNKEIYGCVTNLLARAGRLREAFD 431
Query: 462 YTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGM 521
+ P D V G LL AC++ ++V +G A+++ + P YVLL+N+YA+
Sbjct: 432 LIHRMPFAPDETVWGALLGACKMHKNVELGRLAARKIIEINPDRAKTYVLLANIYAAGNK 491
Query: 522 WGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
WG+ A R++L+ G +KE S I+V FT A+ S ++ + +L+ L+
Sbjct: 492 WGEYADTRRLLRGIGSRKEAGTSWIDVTDKIYSFTTADSSSPQVSLADEVLQILA 546
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 144/288 (50%), Gaps = 9/288 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S LH C+ L G LH L+ ++ V+N ++++Y C ++ AR++FDE+
Sbjct: 178 TCSIALHACASIANLCVGQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEI 237
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
ERNLV+W+ MI+ + Q HL+AL+ +M+L PN + S SACAG+ SL GQQ+H
Sbjct: 238 PERNLVTWNTMIAWYSQC-NHLMALQLLREMNLQPNCFTLTSITSACAGLASLRFGQQVH 296
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+L+ Y + N+L+ MY K G ++A ++ + +S+ ++I G+ N
Sbjct: 297 GAALRRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMNGYAN 356
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVGNTI 242
+ ++F M+ G+ PD F G + C+ + +G +T + L+ N + +
Sbjct: 357 ESIQLFTSMIHAGVHPDHVVFLGLICACNHGGLVDEGWNFFRSMTSEYNLQPNKEIYGCV 416
Query: 243 MALYSKFNLIGEAEKAFRLIEE----KDLISWNTFIAACSHCADYEKG 286
L ++ G +AF LI D W + AC + E G
Sbjct: 417 TNLLAR---AGRLREAFDLIHRMPFAPDETVWGALLGACKMHKNVELG 461
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 127/486 (26%), Positives = 212/486 (43%), Gaps = 34/486 (6%)
Query: 4 SISSLLHHCSKTKALQQGI---SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMI---LAR 57
++SS+L C + A G SLHA ++ G+ V N ++ YA C + + +R
Sbjct: 71 TLSSVLTAC-RGGAADGGCEPSSLHAVAVRRGVDHMPYVVNALIEAYASCEEGVGVEESR 129
Query: 58 KVFDEM-SERNLVSWSAMISGHHQAGEHLLALEFFSQM-----HLLPNEYIFASAISACA 111
K+FD + S R SW++M++G+ + G+ L+ F M L P + + A+ ACA
Sbjct: 130 KLFDALGSGRTAASWTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSP--FTCSIALHACA 187
Query: 112 GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNA 171
I +L GQQ+H L+ + + V NSLI MY DA ++ E E NLV++N
Sbjct: 188 SIANLCVGQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPERNLVTWNT 247
Query: 172 LIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK 231
+IA + + +L+ L P+ F+ C+ LR G +H ++
Sbjct: 248 MIAWYSQCNH----LMALQLLREMNLQPNCFTLTSITSACAGLASLRFGQQVHGAALRRN 303
Query: 232 LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK 291
+ + N ++ +YSK I A+K F +++ KD +SW + I + + +F
Sbjct: 304 YGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMNGYANESIQLFT 363
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI-RMRLNQDVGVGNALVNMYAK 350
M + GV PD F ++ AC V G + L + + + N+ A+
Sbjct: 364 SMIH-AGVHPDHVVFLGLICACNHGGLVDEGWNFFRSMTSEYNLQPNKEIYGCVTNLLAR 422
Query: 351 CGLISCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGG-SALKLFEQMKATGIKPDSV 405
G + ++ L + M + W ++ A H N LG +A K+ E I PD
Sbjct: 423 AGRLREAFDLIHRMPFAPDETVWGALLGACKMHKNVELGRLAARKIIE------INPDRA 476
Query: 406 TFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKK 465
LL AG K GE Y ++ GI E T ID+ + A+ + +
Sbjct: 477 KTYVLLANIYAAG-NKWGE-YADTRRLLRGIGSRKEAGTSWIDVTDKIYSFTTADSSSPQ 534
Query: 466 FPLGQD 471
L +
Sbjct: 535 VSLADE 540
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 168/477 (35%), Positives = 287/477 (60%), Gaps = 3/477 (0%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+ S ++ C ++ +GQ++HA+ +K Y ++ LI +Y K DA V E
Sbjct: 13 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 72
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
E N+VS+ A+I+G+ + + +F ML G P+ F+FA L C+ S+ + G
Sbjct: 73 ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 132
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
+H L +K ES+ FVG++++ +Y+K I EA + F + E+D++S I+ +
Sbjct: 133 IHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGL 192
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
E+ L +F+ + + G+R + T+AS+L A +GLA++ HG+Q+H+H++R +L V + N
Sbjct: 193 DEEALDLFRRLQRE-GMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQN 251
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG-IK 401
+L++MY+KCG ++ S ++F+ M R V+SWN ++ ++ H LG A++LF+ MK +K
Sbjct: 252 SLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVK 311
Query: 402 PDSVTFIGLLTACNHAGLVKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
PDSVTF+ +L+ C+H G+ G E ++ + + G P+IEH+ C++DL GRAG++ EA
Sbjct: 312 PDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAF 371
Query: 461 EYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDG 520
E+ KK P + G+LL ACR+ ++V IGE +A++L ++ YV+LSNLYAS G
Sbjct: 372 EFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAG 431
Query: 521 MWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
W DV R+++K+ + KEP S IE+ T F ++ SH + E+ ++ LS+
Sbjct: 432 RWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSI 488
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 201/389 (51%), Gaps = 9/389 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S+L C A+++G +HA ++K +P V + ++ LY KC + AR+V DEM E
Sbjct: 14 DSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPE 73
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQI 122
RN+VSW+AMISG+ Q G AL F +M + PNE+ FA+ +++C G+QI
Sbjct: 74 RNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQI 133
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H+ +K + S FVG+SL+ MY K G +A V+ E ++VS A+I+G+ +
Sbjct: 134 HSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLD 193
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E+ ++F+ + R+G+ + ++A L S L G +H ++ KL + N++
Sbjct: 194 EEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSL 253
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +YSK + + + F + E+ +ISWN + S + + +FK M ++ V+PD
Sbjct: 254 IDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPD 313
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMR--LNQDVGVGNALVNMYAKCGLISCSYKL 360
TF ++L+ C+ G +I ++ + ++ +V+++ + G + +++
Sbjct: 314 SVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEF 373
Query: 361 FNEM-LHRNVVSWNTIIAA---HANHRLG 385
+M W +++ A H N +G
Sbjct: 374 IKKMPFEPTAAIWGSLLGACRVHQNVHIG 402
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 158/320 (49%), Gaps = 9/320 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +++L C+ + Q G +H+ V+K + + V + +L++YAK GK+ AR+VFD +
Sbjct: 113 TFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGL 172
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
ER++VS +A+ISG+ Q G AL+ F ++ + N +AS ++A +G+ +L G+
Sbjct: 173 PERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGR 232
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H++ L+ + NSLI MY K G + + ++ E ++S+NA++ G+ ++
Sbjct: 233 QVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHG 292
Query: 181 QPEKGFEVFKLMLRQG-LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ E+FKLM + + PD +F L CS +G+ + V K P +
Sbjct: 293 LGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIE 352
Query: 240 NTIMALYSKFNLIGEAEKAFRLIE----EKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
+ + F G E+AF I+ E W + + AC + G V + +
Sbjct: 353 H-YGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLE 411
Query: 296 DHGVRPDDFTFASILAACAG 315
++ S L A AG
Sbjct: 412 IESENAGNYVILSNLYASAG 431
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 119/219 (54%), Gaps = 1/219 (0%)
Query: 195 QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGE 254
QGL + + L C +R+G +H +K E ++ ++ LY+K +G+
Sbjct: 4 QGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD 63
Query: 255 AEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA 314
A + + E++++SW I+ S + L +F EM G P++FTFA++L +C
Sbjct: 64 ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMS-GTAPNEFTFATVLTSCT 122
Query: 315 GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNT 374
+ Q G+QIH+ +I+ + VG++L++MYAK G I + ++F+ + R+VVS
Sbjct: 123 SSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTA 182
Query: 375 IIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
II+ +A L AL LF +++ G++ + VT+ +LTA
Sbjct: 183 IISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTA 221
>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Brachypodium distachyon]
Length = 1054
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 196/571 (34%), Positives = 324/571 (56%), Gaps = 15/571 (2%)
Query: 18 LQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMIS 76
L +G +H +L+ G I + +SN ++N+YAKCG + A +VF + R+ VSW+ +IS
Sbjct: 390 LMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIIS 449
Query: 77 GHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYAS 133
Q G A+ + M + P+ + S +S+CA ++ L GQQ+H ++K+G
Sbjct: 450 VLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDL 509
Query: 134 ISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE-KGFEVFKLM 192
+ V N+L+ MY G S++ ++ E ++VS+N+++ V + P + EVF M
Sbjct: 510 DTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNM 569
Query: 193 LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI 252
+R GL P++ +F L S + L G +H + +K + V N +M+ Y+K +
Sbjct: 570 MRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDM 629
Query: 253 GEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
E+ F + +D +SWN+ I+ + ++ + M + + + D TF+ +L
Sbjct: 630 DSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQML-DCCTFSIVLN 688
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
ACA +A+++ G ++HA IR +L DV V +AL++MY+KCG I + K+FN M +N S
Sbjct: 689 ACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFS 748
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
WN++I+ +A H LG AL++FE+M+ G PD VTF+ +L+AC+HAGLV G YF ME
Sbjct: 749 WNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMME 808
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRD---V 488
+GI P IEH++C+IDLLGRAGKLL+ +EY + P+ + ++ T+L ACR +D +
Sbjct: 809 D-HGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDGDRI 867
Query: 489 VIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEV 548
+G+ ++ L L+P YVL SN YA+ G W D A AR + + +KKE S + +
Sbjct: 868 DLGKEASRMLLELEPQNPVNYVLASNFYAATGRWEDTAKARAAMGGAAMKKEAGQSWVTL 927
Query: 549 QGTFEKFTVAEFSHSKIGEI----NYMLKTL 575
F + SH EI N++++ +
Sbjct: 928 GDGVHTFIAGDRSHPNTKEIYEKLNFLIQKI 958
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/461 (28%), Positives = 227/461 (49%), Gaps = 29/461 (6%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
LH ++K G+ D+ +SNH++NLYAK ++ AR+VFD M ERN VSW+ ++SG+ +G
Sbjct: 78 LHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSGI 137
Query: 84 HLLALEFFSQMHL------LPNEYIFASAISAC--AGIQSLVKGQQIHAYSLKFGYASIS 135
A F M P + F S + AC AG L Q+H K YAS +
Sbjct: 138 TDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASNT 197
Query: 136 FVGNSLISMY--MKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLML 193
V N+LISMY VG A V+ +L+++NAL++ + + F +F ML
Sbjct: 198 TVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAML 257
Query: 194 RQG----LLPDRFSFAGGLEICSVSNDLRKGMI--LHCLTVKCKLESNPFVGNTIMALYS 247
L P+ +F + S+S+ G++ + +K S+ +VG+ +++ ++
Sbjct: 258 HDDSAIELRPNEHTFGSLITATSLSS-CSSGVLDQVFARVLKSGSSSDLYVGSALVSAFA 316
Query: 248 KFNLIGEAEKAFRLIEEKDLISWNTFIAAC--SHCADYEKGLSVFKEMSNDHGVRPDDFT 305
+ ++ EA+ F ++E++ ++ N I HC+ E+ + +F + V D T
Sbjct: 317 RHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCS--EEAVGIFMGTRDSFVVNTD--T 372
Query: 306 FASILAACAGLA----SVQHGKQIHAHLIRMRL-NQDVGVGNALVNMYAKCGLISCSYKL 360
F +L+A A + + G+++H H++R L + + + N LVNMYAKCG I + ++
Sbjct: 373 FVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRV 432
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F + R+ VSWNTII+ + A+ + M+ I P + I L++C L+
Sbjct: 433 FRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLL 492
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
G+ K +G+ D L+ + G G E+ E
Sbjct: 493 TAGQQVHCDAVK-WGLDLDTSVSNALVKMYGDCGARSESWE 532
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 193/385 (50%), Gaps = 25/385 (6%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
L C+ + L G +H +K G+ D VSN ++ +Y CG + ++F+ M+E ++
Sbjct: 483 LSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDI 542
Query: 69 VSWSA----MISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQ 121
VSW++ M+S H E ++E FS M L PN+ F + +SA + + L G+Q
Sbjct: 543 VSWNSIMGVMVSSHAPTAE---SVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQ 599
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVG-YSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+HA LK G + V N+L+S Y K G S L + + VS+N++I+G++ N
Sbjct: 600 VHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNG 659
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
++ + LM+ + D +F+ L C+ L +GM +H ++ +LES+ V +
Sbjct: 660 HLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVES 719
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +YSK I A K F + +K+ SWN+ I+ + EK L +F+EM + G
Sbjct: 720 ALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRN-GAC 778
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV------GNALVNMYAKCGLI 354
PD TF S+L+AC+ V G L + +D G+ + ++++ + G +
Sbjct: 779 PDHVTFVSVLSACSHAGLVDRG------LDYFEMMEDHGILPHIEHYSCVIDLLGRAGKL 832
Query: 355 SCSYKLFNEM-LHRNVVSWNTIIAA 378
+ N M + N + W T++ A
Sbjct: 833 LKIQEYINRMPMKPNTLIWRTVLVA 857
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 139/290 (47%), Gaps = 17/290 (5%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS-E 65
+LL S L+ G +HA VLK G D V N +++ YAK G M ++F MS
Sbjct: 583 NLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGR 642
Query: 66 RNLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQI 122
R+ VSW++MISG+ G E + + + + + F+ ++ACA + +L +G ++
Sbjct: 643 RDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEM 702
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
HA+ ++ S V ++L+ MY K G A V+ + N S+N++I+G+ +
Sbjct: 703 HAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLG 762
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
EK E+F+ M R G PD +F L CS G++ L +E + + + I
Sbjct: 763 EKALEIFEEMQRNGACPDHVTFVSVLSACS-----HAGLVDRGLDYFEMMEDHGILPH-I 816
Query: 243 MALYSKFNLIGEAEKAFRLIE-------EKDLISWNTFIAACSHCADYEK 285
+L+G A K ++ E + + + W T + AC D ++
Sbjct: 817 EHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDGDR 866
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 155/316 (49%), Gaps = 14/316 (4%)
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+++H +K G F+ N L+++Y K + A V+ E N VS+ L++G+V +
Sbjct: 76 ERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLS 135
Query: 180 QQPEKGFEVFKLMLRQG---LLPDRFSFAGGLEICSVSND--LRKGMILHCLTVKCKLES 234
++ F VFK ML +G P F+F L C + L + +H L K S
Sbjct: 136 GITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYAS 195
Query: 235 NPFVGNTIMALYSK--FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
N V N ++++Y L +A++ F +DLI+WN ++ + ++F
Sbjct: 196 NTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMA 255
Query: 293 MSNDHG---VRPDDFTFASILAACAGLASVQHG--KQIHAHLIRMRLNQDVGVGNALVNM 347
M +D +RP++ TF S++ A + L+S G Q+ A +++ + D+ VG+ALV+
Sbjct: 256 MLHDDSAIELRPNEHTFGSLITATS-LSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSA 314
Query: 348 YAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTF 407
+A+ G++ + +F + RN V+ N +I A+ +F + + + ++ TF
Sbjct: 315 FARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFVV-NTDTF 373
Query: 408 IGLLTACNHAGLVKEG 423
+ LL+A + ++G
Sbjct: 374 VVLLSAVAEFSIPEDG 389
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 72/111 (64%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S +L+ C+ AL++G+ +HA ++ ++ DV+V + +L++Y+KCG++ A KVF+ M
Sbjct: 682 TFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSM 741
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
S++N SW++MISG+ + G ALE F +M P+ F S +SAC+
Sbjct: 742 SQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACS 792
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 320/578 (55%), Gaps = 9/578 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++LL T L++ + +H+ +++ G +IV N +++ Y K + +A ++F EM
Sbjct: 145 TFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEM 204
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
++ VS++ MI+G+ + G AL+ F QM + P+ + FA+ + G + ++ GQ
Sbjct: 205 PTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQ 264
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH ++K Y FV N+L+ Y K Y A ++ E E + VS+N +I G+ N
Sbjct: 265 QIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNG 324
Query: 181 QPEKGFEVFKLMLRQGLLPDR--FSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
Q EK F++FK + QG DR F FA L + ++ +L G H V S V
Sbjct: 325 QYEKSFDLFKRL--QGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQV 382
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
GN ++ +Y+K +A + F + ++ + W I+ +E+ L +FKEM N
Sbjct: 383 GNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEM-NREN 441
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
V D TFAS L A A LASV GKQ+H+ +IR+ L V G+ LV+MYA CG + +
Sbjct: 442 VHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAI 501
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
++F EM RN+V WN +I+A++ + + F M +G+ PDSV+F+ +LTAC+H G
Sbjct: 502 EVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRG 561
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV++ YFNSM + Y + P +H+ +ID+L R+G+ EAE + P D ++ ++
Sbjct: 562 LVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSV 621
Query: 479 LSACRLRRDVVIGERLAKQLFHLQP-TTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
L++CR+ ++ + ++ A QLF + + YV +SN+YA G W + A +K +++ G+
Sbjct: 622 LNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGV 681
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KK +YS +E+ FT + +H + +I + +L
Sbjct: 682 KKVTAYSWVEIDHRVHVFTANDRTHPQTEQIRRKINSL 719
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 128/444 (28%), Positives = 218/444 (49%), Gaps = 6/444 (1%)
Query: 41 NHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLL 97
N +++ Y K + AR++F+ M RN VSW+ MI G+ Q + A +++M +
Sbjct: 81 NMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVK 140
Query: 98 PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV 157
P+ FA+ +S +L + QIH++ ++FG+++ V NSL+ Y K A +
Sbjct: 141 PDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQL 200
Query: 158 YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDL 217
+ E + VSFN +I G+ + E+ ++F M P F+FA L + S D+
Sbjct: 201 FSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDV 260
Query: 218 RKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC 277
G +H L +K + FV N ++ YSK + I A+ F + E D +S+N I
Sbjct: 261 IFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGY 320
Query: 278 SHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD 337
+ YEK +FK + R +F FA++L+ A ++ G+Q HA + +
Sbjct: 321 AWNGQYEKSFDLFKRLQGTSFDRK-NFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSE 379
Query: 338 VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA 397
V VGNALV+MYAKC + ++F + +RN V W II+ + ALK+F++M
Sbjct: 380 VQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNR 439
Query: 398 TGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLL 457
+ D TF L A + V G+ +S+ + G+ + + L+D+ G +
Sbjct: 440 ENVHGDQATFASTLKASANLASVSLGKQLHSSVIR-LGLLSSVFSGSVLVDMYANCGSMK 498
Query: 458 EAEEYTKKFPLGQDPIVLGTLLSA 481
+A E K+ P ++ + L+SA
Sbjct: 499 DAIEVFKEMP-DRNIVCWNALISA 521
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 189/577 (32%), Positives = 311/577 (53%), Gaps = 7/577 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L C+ + G+ +H +K+G+ +V+V+N ++ +Y+KCG + A+ F +
Sbjct: 250 TVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKN 309
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL-----PNEYIFASAISACAGIQSLVK 118
+ +N+VSW+ MIS G+ A +M + NE + + AC L
Sbjct: 310 NNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRS 369
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+++H YS + + + + N+ I Y K G + A V+ + + S+NALI G +
Sbjct: 370 LKELHGYSFRHCFQHVE-LSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQ 428
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N P K + M G PD F+ + L C+ L+ G +H ++ LE++ FV
Sbjct: 429 NGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFV 488
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
G ++++ Y A F +++K+L+SWN I+ S + L++F++ S G
Sbjct: 489 GTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRK-SLSEG 547
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
++ + S+ AC+ L++++ GK+ H ++++ +D VG ++++MYAK G I S
Sbjct: 548 IQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESR 607
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
K+F+ + +NV SWN II AH H G A++L+E+MK G PD T+IG+L AC HAG
Sbjct: 608 KVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAG 667
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV+EG YF M+ I P +EH+ CLID+L RAG+L +A + P D + +L
Sbjct: 668 LVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSL 727
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L +CR + IGE++AK+L L+P YVLLSNLYA G W V R+M+K+ GL+
Sbjct: 728 LRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQ 787
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
K+ S IEV G F V + K EI + + L
Sbjct: 788 KDAGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRL 824
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/421 (32%), Positives = 220/421 (52%), Gaps = 8/421 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLK-MGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
++I LL C K ++ G LH V + D +++ ++ +YA CG + +R VFD
Sbjct: 44 EAIGLLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFD 103
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFF----SQMHLLPNEYIFASAISACAGIQSLV 117
M +NL+ W+A++SG+ + G + ++ F S P+ + F S I AC GI +
Sbjct: 104 NMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVR 163
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+ IH +K G FVGN+L+ MY K G +A+ V+ E NLVS+N++I F
Sbjct: 164 LGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFS 223
Query: 178 ENQQPEKGFEVFKLML-RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
EN F++ ML +GLLPD + L +C+ ++ GM +H L VK L
Sbjct: 224 ENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEV 283
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS-N 295
V N ++ +YSK + EA+ +F K+++SWNT I+A S D + ++ +EM
Sbjct: 284 MVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQ 343
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
++ ++ T ++L AC ++ K++H + R Q V + NA + YAKCG ++
Sbjct: 344 GEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCF-QHVELSNAFILAYAKCGALN 402
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ K+F+ + + V SWN +I HA + AL L QM +G +PD T LL AC
Sbjct: 403 SAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACA 462
Query: 416 H 416
H
Sbjct: 463 H 463
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 168/477 (35%), Positives = 287/477 (60%), Gaps = 3/477 (0%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+ S ++ C ++ +GQ++HA+ +K Y ++ LI +Y K DA V E
Sbjct: 480 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 539
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
E N+VS+ A+I+G+ + + +F ML G P+ F+FA L C+ S+ + G
Sbjct: 540 ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 599
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
+H L +K ES+ FVG++++ +Y+K I EA + F + E+D++S I+ +
Sbjct: 600 IHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGL 659
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
E+ L +F+ + + G+R + T+AS+L A +GLA++ HG+Q+H+H++R +L V + N
Sbjct: 660 DEEALDLFRRLQRE-GMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQN 718
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG-IK 401
+L++MY+KCG ++ S ++F+ M R V+SWN ++ ++ H LG A++LF+ MK +K
Sbjct: 719 SLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVK 778
Query: 402 PDSVTFIGLLTACNHAGLVKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
PDSVTF+ +L+ C+H G+ G E ++ + + G P+IEH+ C++DL GRAG++ EA
Sbjct: 779 PDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAF 838
Query: 461 EYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDG 520
E+ KK P + G+LL ACR+ ++V IGE +A++L ++ YV+LSNLYAS G
Sbjct: 839 EFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAG 898
Query: 521 MWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
W DV R+++K+ + KEP S IE+ T F ++ SH + E+ ++ LS+
Sbjct: 899 RWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSI 955
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 201/389 (51%), Gaps = 9/389 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S+L C A+++G +HA ++K +P V + ++ LY KC + AR+V DEM E
Sbjct: 481 DSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPE 540
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQI 122
RN+VSW+AMISG+ Q G AL F +M + PNE+ FA+ +++C G+QI
Sbjct: 541 RNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQI 600
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H+ +K + S FVG+SL+ MY K G +A V+ E ++VS A+I+G+ +
Sbjct: 601 HSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLD 660
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E+ ++F+ + R+G+ + ++A L S L G +H ++ KL + N++
Sbjct: 661 EEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSL 720
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +YSK + + + F + E+ +ISWN + S + + +FK M ++ V+PD
Sbjct: 721 IDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPD 780
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMR--LNQDVGVGNALVNMYAKCGLISCSYKL 360
TF ++L+ C+ G +I ++ + ++ +V+++ + G + +++
Sbjct: 781 SVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEF 840
Query: 361 FNEM-LHRNVVSWNTIIAA---HANHRLG 385
+M W +++ A H N +G
Sbjct: 841 IKKMPFEPTAAIWGSLLGACRVHQNVHIG 869
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 158/320 (49%), Gaps = 9/320 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +++L C+ + Q G +H+ V+K + + V + +L++YAK GK+ AR+VFD +
Sbjct: 580 TFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGL 639
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
ER++VS +A+ISG+ Q G AL+ F ++ + N +AS ++A +G+ +L G+
Sbjct: 640 PERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGR 699
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H++ L+ + NSLI MY K G + + ++ E ++S+NA++ G+ ++
Sbjct: 700 QVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHG 759
Query: 181 QPEKGFEVFKLMLRQG-LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ E+FKLM + + PD +F L CS +G+ + V K P +
Sbjct: 760 LGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIE 819
Query: 240 NTIMALYSKFNLIGEAEKAFRLIE----EKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
+ + F G E+AF I+ E W + + AC + G V + +
Sbjct: 820 H-YGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLE 878
Query: 296 DHGVRPDDFTFASILAACAG 315
++ S L A AG
Sbjct: 879 IESENAGNYVILSNLYASAG 898
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 119/219 (54%), Gaps = 1/219 (0%)
Query: 195 QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGE 254
QGL + + L C +R+G +H +K E ++ ++ LY+K +G+
Sbjct: 471 QGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD 530
Query: 255 AEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA 314
A + + E++++SW I+ S + L +F EM G P++FTFA++L +C
Sbjct: 531 ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMS-GTAPNEFTFATVLTSCT 589
Query: 315 GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNT 374
+ Q G+QIH+ +I+ + VG++L++MYAK G I + ++F+ + R+VVS
Sbjct: 590 SSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTA 649
Query: 375 IIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
II+ +A L AL LF +++ G++ + VT+ +LTA
Sbjct: 650 IISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTA 688
>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 676
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 195/576 (33%), Positives = 320/576 (55%), Gaps = 11/576 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+SL+ + K+L SLH +LK G + +++ Y KC + ARK+FDEM
Sbjct: 5 TSLIAQFTNKKSLTTLKSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMPN 63
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQI 122
R++V+W++MIS H G+ A+E + M +LP+ Y F++ A + + +GQ+
Sbjct: 64 RHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKA 123
Query: 123 HAYSLKFGY-ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
H ++ G+ S FV ++ MY K G DA V+ + ++V F ALI G+ +
Sbjct: 124 HGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGL 183
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ EVF+ M+ + P+ ++ A L C DL G ++H L VK LES +
Sbjct: 184 DGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTS 243
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +YSK N++ ++ K F + ++W +FI E LS+F+EM + P
Sbjct: 244 LLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIR-CSISP 302
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
+ FTF+SIL AC+ LA ++ G+QIHA +++ ++ + V AL+++Y KCG + + +F
Sbjct: 303 NHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVF 362
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ +VVS NT+I A+A + G AL+LFE+MK G KP+ VTFI +L ACN+AGLV+
Sbjct: 363 ESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVE 422
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG--TLL 479
EG F+ + + I +H+TC+IDLLGRA + EA ++ G++P V+ TLL
Sbjct: 423 EGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEE---GKNPDVIQWRTLL 479
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
+AC++ +V + E+ K++ P ++LL+N+YAS G W +V + +D LKK
Sbjct: 480 NACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKK 539
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P+ S +++ F + SH + EI+ ML L
Sbjct: 540 TPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHEL 575
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 146/299 (48%), Gaps = 14/299 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++S+L C L G +H V+K G++ V +L +Y+KC + + KVF+ +
Sbjct: 205 TLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSL 264
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ + V+W++ I G Q G +AL F +M + PN + F+S + AC+ + L G+
Sbjct: 265 AYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGE 324
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIHA ++K G +V +LI +Y K G A V+ E ++VS N +I + +N
Sbjct: 325 QIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNG 384
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ E+F+ M + G P+ +F L C+ + + +G + L + +N +
Sbjct: 385 FGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSL-----IRNNHSIEL 439
Query: 241 TIMALYSKFNLIGEA---EKAFRLIEE---KDLISWNTFIAACSHCADYEKGLSVFKEM 293
T +L+G A E+A LIEE D+I W T + AC + E K+M
Sbjct: 440 TRDHYTCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKM 498
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 20/233 (8%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+LH CS L+ G +HA +K+G+ + V +++LY KCG + AR VF+ +
Sbjct: 306 TFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESL 365
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
+E ++VS + MI + Q G ALE F +M L PN F S + AC + +G
Sbjct: 366 TELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGC 425
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYS---SDALLVYGEAFEPNLVSFNALIAGFV 177
QI +SL SI + M +G + +A ++ E P+++ + L+
Sbjct: 426 QI--FSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLLNACK 483
Query: 178 ENQQPEKGFEVFKLMLRQG--------LLPDRFSFAGG----LEICSVSNDLR 218
+ + E + K ML Q LL + ++ AG +E+ S DLR
Sbjct: 484 IHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLR 536
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 186/574 (32%), Positives = 317/574 (55%), Gaps = 6/574 (1%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
L C+ + + G+ + ++ ++ G++ + V + +++ K GK+ A++VFD M +++
Sbjct: 137 LKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDV 196
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAY 125
V W+++I G+ QAG +A + F +MH + P+ S I AC GI +L G+ +H Y
Sbjct: 197 VCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGY 256
Query: 126 SLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKG 185
L G + V S + MY K+G A V+ + NLVS+NA+I+G V N +
Sbjct: 257 VLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGES 316
Query: 186 FEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMAL 245
F++F ++R D + L+ CS + L G ILH ++ ESN + I+ L
Sbjct: 317 FDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIR-SFESNLILSTAIVDL 375
Query: 246 YSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFT 305
YSK + +A F ++++++I+W + + E L +F +M + G+ + T
Sbjct: 376 YSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQM-QEEGIAANSVT 434
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE-M 364
F S++ +CA L S++ G+ IH HL R+ D+ ALV+MYAKCG I+ + ++F+
Sbjct: 435 FVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGS 494
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+ ++VV WN++I + H G A+ ++ +M G+KP+ TF+ LL+AC+H+ LV++G
Sbjct: 495 ISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGI 554
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRL 484
+ FNSME+ + I P +H+ CL+DLL RAG+ EA+ +K P VL LLS CR
Sbjct: 555 SLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRT 614
Query: 485 RRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYS 544
+++ +G + + +L L Y++LSN+YA W V R ++++ GLKK P YS
Sbjct: 615 HKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYS 674
Query: 545 MIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSLA 578
++E F + SH EI + L++L A
Sbjct: 675 LVETGNWVHTFFAGDNSHPNWEEIYHFLESLRSA 708
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/478 (26%), Positives = 231/478 (48%), Gaps = 8/478 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
SLL SK + S HA ++ + D V+ ++ Y+ + AR VFD+ +
Sbjct: 36 SLLRESSKNLIWVK--STHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQP 93
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFAS---AISACAGIQSLVKGQQIH 123
+ +AM+ G+ Q+G + LE F M E S A+ ACA G +I
Sbjct: 94 KGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEII 153
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ +++ G FVG+S+IS +K G +A V+ ++V +N++I G+V+ +
Sbjct: 154 SSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFD 213
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
F++F M G+ P + ++ C +L+ G +H + L ++ V + +
Sbjct: 214 VAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFV 273
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+YSK I A F + ++L+SWN I+ C + +F + G D
Sbjct: 274 DMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSG-GFDL 332
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T S+L C+ AS+ GK +H IR ++ + A+V++Y+KCG + + +FN
Sbjct: 333 TTIVSLLQGCSQTASLATGKILHGCAIR-SFESNLILSTAIVDLYSKCGSLKQATFVFNR 391
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M RNV++W ++ A + AL+LF QM+ GI +SVTF+ L+ +C H G +K G
Sbjct: 392 MKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRG 451
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+ + + G + DI + T L+D+ + GK+ AE + +D ++ ++++
Sbjct: 452 RSIHGHLFR-LGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITG 508
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 192/584 (32%), Positives = 322/584 (55%), Gaps = 17/584 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +++L + ++ G+ +HA ++K G + V N ++ +Y K + A VFD M
Sbjct: 207 TFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSM 266
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQ 120
R+ V+W+ MI G+ G +L + F +M L + +F +A+ C+ + L +
Sbjct: 267 VVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTK 326
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEP-NLVSFNALIAGFVEN 179
Q+H +K GY + +L+ Y K +A ++ A N+V++ A+I GFV+N
Sbjct: 327 QLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQN 386
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
EK ++F M R+G+ P+ F+++ L S+ L + LH +K E P V
Sbjct: 387 NNNEKAVDLFCQMSREGVRPNHFTYSTVLA-GKPSSLLSQ---LHAQIIKAYYEKVPSVA 442
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ Y K + E+ + F I KD+++W+ + + D EK + VF ++ + GV
Sbjct: 443 TALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKE-GV 501
Query: 300 RPDDFTFASILAACAG-LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+P+++TF+S++ AC+ A+V+HGKQIHA ++ + + V +AL+ MY+K G I +
Sbjct: 502 KPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAE 561
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
K+F R++VSWN++I + H AL++F+ M+ G+ D VTFIG+LTAC HAG
Sbjct: 562 KVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAG 621
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV+EGE YFN M K Y I IEH++C++DL RAG +A + P P + TL
Sbjct: 622 LVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTL 681
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L+ACR+ R++ +G+ A++L LQP YVLLSN++A G W + A RK++ + +K
Sbjct: 682 LAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVK 741
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSH-------SKIGEINYMLKTL 575
KE S IE++ F + SH +K+ E++ LK +
Sbjct: 742 KEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDM 785
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 149/544 (27%), Positives = 257/544 (47%), Gaps = 49/544 (9%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G +H LK G DV V ++++Y K R +FDEM +N+VSW++++SG+ +
Sbjct: 123 GRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYAR 182
Query: 81 AGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
G + + +QM + PN + FA+ + A A + G Q+HA +K G+ +FV
Sbjct: 183 NGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFV 242
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
N+LI MY+K DA V+ + V++N +I G+ +GF++F M G+
Sbjct: 243 CNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGV 302
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
R F L++CS +L LHC VK E + +M YSK + + EA K
Sbjct: 303 KLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFK 362
Query: 258 AFRLIEEK-DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA-CAG 315
F + + ++++W I + EK + +F +MS + GVRP+ FT++++LA +
Sbjct: 363 LFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSRE-GVRPNHFTYSTVLAGKPSS 421
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
L S Q+HA +I+ + V AL++ Y K G + S ++F + +++V+W+ +
Sbjct: 422 LLS-----QLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAM 476
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN------------HAGLVKEG 423
+ A R A+++F Q+ G+KP+ TF ++ AC+ HA VK G
Sbjct: 477 LTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSG 536
Query: 424 EA-----------------YFNSMEKTYGISP--DIEHFTCLIDLLGRAG---KLLEAEE 461
++ S EK + DI + +I G+ G K LE +
Sbjct: 537 KSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQ 596
Query: 462 YTKKFPLGQDPIVLGTLLSACRLRRDVVIGER---LAKQLFHLQPTTTSPYVLLSNLYAS 518
+ L D + +L+AC V GE+ + + +H+ Y + +LY+
Sbjct: 597 IMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEH-YSCMVDLYSR 655
Query: 519 DGMW 522
GM+
Sbjct: 656 AGMF 659
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 204/444 (45%), Gaps = 27/444 (6%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAG 112
A ++FDE +++ ++ ++ + AL F +H L + + A+ C
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
+ V G+Q+H SLK G+ VG SL+ MYMK D ++ E N+VS+ +L
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176
Query: 173 IAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
++G+ N ++ + M +G+ P+ F+FA L + + + G+ +H + VK
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
E FV N ++ +Y K ++G+AE F + +D ++WN I + Y +G +F
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
M GV+ F + L C+ + KQ+H +++ + AL+ Y+KC
Sbjct: 297 MRLA-GVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCS 355
Query: 353 LISCSYKLFN--EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGL 410
+ ++KLF+ + H NVV+W +I + A+ LF QM G++P+ T+ +
Sbjct: 356 SVDEAFKLFSMADAAH-NVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTV 414
Query: 411 LTACN-------HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYT 463
L HA ++K AY+ EK ++ T L+D + G ++E+
Sbjct: 415 LAGKPSSLLSQLHAQIIK---AYY---EKVPSVA------TALLDAYVKTGNVVESARVF 462
Query: 464 KKFPLGQDPIVLGTLLSACRLRRD 487
P +D + +L+ RD
Sbjct: 463 YSIP-AKDIVAWSAMLTGLAQTRD 485
>gi|449433319|ref|XP_004134445.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Cucumis sativus]
Length = 606
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 195/577 (33%), Positives = 312/577 (54%), Gaps = 6/577 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQP-DVIVSNHVLNLYAKCGKMILARKVFDE 62
S++S++ ++ G + HA +LK P + NH++N+YAK + A+ + +
Sbjct: 8 SLASVVELAVSVRSSLLGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILEL 67
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
R++V+W+A+I+G Q G + AL FS M + PN++ F + A G++ G
Sbjct: 68 APCRSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTG 127
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+HA ++K G + FVG S+ MY K+G+ +DA V+ E NL ++NA I+ V +
Sbjct: 128 KQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLH 187
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+PE F +LR G PD +F L CS L G LH ++ N V
Sbjct: 188 GRPEDSVIAFIELLRVGGKPDSITFCAFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVS 247
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N ++ Y K + +E F + E++ +SW++ IAA + EK +F + +
Sbjct: 248 NGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKED-I 306
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
P DF +S+L ACAGL+ ++ G+ + A ++ + Q++ V +ALV+MY KCG I + +
Sbjct: 307 EPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQ 366
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTACNHAG 418
FN M RN+VSWN ++ +A+ A+ L E+M A GI P V+ I L+AC+ AG
Sbjct: 367 AFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAG 426
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
+K G F SM++ YG+ P EH+ CL+DLLGRAG + A ++ K+ P + G L
Sbjct: 427 DLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGAL 486
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L ACR+ +G+ A++LF L P + +V+LSN++A+ G W +V R +K+ G+K
Sbjct: 487 LGACRMHGKPELGKLAAEKLFELDPKDSGNHVVLSNMFAATGRWEEVTVVRNEMKEVGIK 546
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
K +S I V F + SH K EI +L L
Sbjct: 547 KGAGFSWITVDSRIHMFQAKDKSHEKDPEIQDILGKL 583
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 204/614 (33%), Positives = 316/614 (51%), Gaps = 45/614 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
SIS L + T L + LH+ ++ +G+ VI S ++ YA + VF
Sbjct: 18 SISRALASAATTTQLHK---LHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLA 74
Query: 64 SERNLVS-WSAMISGHHQAGEHLLALEFFSQ---MHLLPNEYIFASAISACAGIQSLVKG 119
S N V W+++I G AL +S+ + L P+ Y F S I+ACAG+
Sbjct: 75 SPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMA 134
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ IH L G+ S ++GN+LI MY + A V+ E ++VS+N+LI+G+ N
Sbjct: 135 KSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNAN 194
Query: 180 QQPEKGFEVF----KLMLR--QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE 233
+ E++ KL + PD + L+ C DL G +H + E
Sbjct: 195 GYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYE 254
Query: 234 SNPFVGNTIMALYSKF-NLI------------------------------GEAEKAFRLI 262
+ N ++ +Y+K NL+ G++ K F +
Sbjct: 255 CDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENM 314
Query: 263 EEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG 322
+ +D+I+WNT IA+C H D GL + M + GV PD T SIL C+ LA+ + G
Sbjct: 315 KARDIITWNTIIASCVHSEDCNLGLRMISRMRTE-GVTPDMATMLSILPVCSLLAAKRQG 373
Query: 323 KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH 382
K+IH + ++ L DV VGN L+ MY+KCG + S+++F M ++VV+W +I+A +
Sbjct: 374 KEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMY 433
Query: 383 RLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEH 442
G A++ F +M+A GI PD V F+ ++ AC+H+GLV+EG YF+ M+K Y I P IEH
Sbjct: 434 GEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEH 493
Query: 443 FTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQ 502
+ C++DLL R+ L +AE++ PL D + G LLSACR+ D I ER+++++ L
Sbjct: 494 YACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELN 553
Query: 503 PTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
P T YVL+SN+YA+ G W V RK +K GLKK+P S +E+Q F
Sbjct: 554 PDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFF 613
Query: 563 SKIGEINYMLKTLS 576
+ E+N +L L+
Sbjct: 614 EQFEEVNKLLGMLA 627
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 5/178 (2%)
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN-EM 364
F+SI A A A+ ++H+ +I + L+ V L+ YA + S+ +F
Sbjct: 16 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 75
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK-EG 423
NV WN+II A ++ L AL L+ + + ++PD+ TF ++ AC AGL+ E
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC--AGLLDFEM 133
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+ G D+ LID+ R L +A + ++ PL +D + +L+S
Sbjct: 134 AKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPL-RDVVSWNSLISG 190
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 203/585 (34%), Positives = 315/585 (53%), Gaps = 43/585 (7%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYA--KCGKMILARKVFDEMS 64
+LL C + L+Q +H+ ++K G+ + ++ A G + A +F+ +
Sbjct: 37 TLLSTCKSFQNLKQ---IHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIE 93
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQ 121
+ N W+ MI G+ + + A++F+ +M L PN Y F + +CA + + +G+Q
Sbjct: 94 QPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQ 153
Query: 122 IHAYSLKFGYASISFVGNSLISMYMK--------------------------VGYS---- 151
IH + LK G S FV SLI+MY + GY+
Sbjct: 154 IHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGC 213
Query: 152 -SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
DA ++ E + VS+NA+IAG+ ++ + E+ F+ M R + P+ + L
Sbjct: 214 LDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSA 273
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
C+ S L G + L SN + N ++ +YSK + +A F I EKD+ISW
Sbjct: 274 CAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISW 333
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
N I SH Y++ L++F++M + V P+D TF SIL ACA L ++ GK IHA++
Sbjct: 334 NVMIGGYSHMNSYKEALALFRKMQQSN-VEPNDVTFVSILPACAYLGALDLGKWIHAYID 392
Query: 331 RMRLN-QDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
+ L + + +L++MYAKCG I + ++F M +++ SWN +I+ A H AL
Sbjct: 393 KKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMAL 452
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
+LF QM+ G +PD +TF+G+L+AC+HAGLV+ G F+SM + Y ISP ++H+ C+IDL
Sbjct: 453 ELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDL 512
Query: 450 LGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPY 509
LGRAG EAE K + D + G+LL ACR+ +V +GE AK LF L+P Y
Sbjct: 513 LGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAY 572
Query: 510 VLLSNLYASDGMWGDVAGARKMLKDSGLKK-EPSYSMI-EVQGTF 552
VLLSN+YA+ G W DVA R L D G+KK + Y M+ E+ +F
Sbjct: 573 VLLSNIYATAGRWDDVARIRTKLNDKGMKKXQDIYKMLDEIDQSF 617
>gi|242037437|ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
gi|241919967|gb|EER93111.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
Length = 693
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 181/558 (32%), Positives = 299/558 (53%), Gaps = 11/558 (1%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G +H+ ++ G D + + ++ LY++CG M A +VF M ++V +++++S +
Sbjct: 129 GEQVHSLAVRAGFAADAWIGSCLIELYSRCGSMWAAEEVFRRMEAPDVVGYTSLVSALCR 188
Query: 81 AGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
G+ A+E QM L PNE+ S ++ C + G+QIH Y LK + +
Sbjct: 189 NGDLARAVEVLCQMMRQGLQPNEHTMTSMLAECPRM----IGEQIHGYMLKVMGSQSVYA 244
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
+LI Y + G A V+ N+VS+ +++ + + + E VF M+ + +
Sbjct: 245 STALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLEDALRVFSEMISEAV 304
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
P+ F+F+ L C + G +HC +KC L ++ V N ++++Y + + E E
Sbjct: 305 EPNEFAFSIALGAC---GSVCLGRQIHCSAIKCNLMTDIRVSNALLSMYGRSGFVSEVEA 361
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
IE DL+SW I+A EK +++ +M ++ G P+D+ F+S L++CA LA
Sbjct: 362 VLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSE-GFTPNDYAFSSGLSSCADLA 420
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
+ G+Q+H +++ + V GNAL+NMY+KCG I + F+ M +V+SWN++I
Sbjct: 421 LLDQGRQLHCLALKLGCDFKVCTGNALINMYSKCGQIGSARLAFDVMNLHDVMSWNSLIH 480
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
A H L+ F +M ++G +PD TFI +L CNHAGLVKEGE +F M YG++
Sbjct: 481 GLAQHGAANLVLEAFSEMCSSGWQPDDSTFIAVLVGCNHAGLVKEGETFFRLMTDRYGLT 540
Query: 438 PDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQ 497
P H+ C+ID+LGR G+ EA K P D ++ TLL++C+L +++ IG+ +
Sbjct: 541 PTPSHYACMIDMLGRNGRFDEALHMIKNMPFEPDVLIWKTLLASCKLHKNLDIGKLATDK 600
Query: 498 LFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTV 557
L L ++ YVL+SNLYA W D R+ + + G+KK+ +S IEV+ F
Sbjct: 601 LMELSERDSASYVLMSNLYAMHEEWQDAERVRRRMDEIGVKKDAGWSWIEVKNEVSTFVA 660
Query: 558 AEFSHSKIGEINYMLKTL 575
+ SHS I ML L
Sbjct: 661 RDTSHSDSASIYQMLAEL 678
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 203/406 (50%), Gaps = 15/406 (3%)
Query: 26 AAVLKMGIQP--DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
AA +++G P DV++ L+ K G++ A +FD M +N+V+W+ ISG + G+
Sbjct: 29 AANVRLGAPPPPDVVLDCKRLDALMKSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQ 88
Query: 84 HLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK--GQQIHAYSLKFGYASISFVG 138
A F+ M + N++ +A++ACA + G+Q+H+ +++ G+A+ +++G
Sbjct: 89 PEAAAAMFADMLESGVAANDFACNAALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIG 148
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL 198
+ LI +Y + G A V+ P++V + +L++ N + EV M+RQGL
Sbjct: 149 SCLIELYSRCGSMWAAEEVFRRMEAPDVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQ 208
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKA 258
P+ + L C G +H +K + + ++ YS++ AE
Sbjct: 209 PNEHTMTSMLAECP----RMIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETV 264
Query: 259 FRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
F ++ K+++SW + + C E L VF EM ++ V P++F F+ L AC S
Sbjct: 265 FENLDSKNVVSWCSMMQLCIRDGRLEDALRVFSEMISE-AVEPNEFAFSIALGAC---GS 320
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA 378
V G+QIH I+ L D+ V NAL++MY + G +S + ++ + ++VSW I+A
Sbjct: 321 VCLGRQIHCSAIKCNLMTDIRVSNALLSMYGRSGFVSEVEAVLGKIENPDLVSWTAAISA 380
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+ + A+ L QM + G P+ F L++C L+ +G
Sbjct: 381 NFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGR 426
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 5/176 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS L C+ L QG LH LK+G V N ++N+Y+KCG++ AR FD M
Sbjct: 408 AFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVCTGNALINMYSKCGQIGSARLAFDVM 467
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ +++SW+++I G Q G L LE FS+M P++ F + + C + +G+
Sbjct: 468 NLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSGWQPDDSTFIAVLVGCNHAGLVKEGE 527
Query: 121 Q-IHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIA 174
+ ++G +I M + G +AL ++ FEP+++ + L+A
Sbjct: 528 TFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFDEALHMIKNMPFEPDVLIWKTLLA 583
>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
Length = 730
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 176/537 (32%), Positives = 306/537 (56%), Gaps = 20/537 (3%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAG 112
AR++FD M ERN+V+W+A+++G+ + L LE F +M + P+ Y + ++AC
Sbjct: 92 ARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLA 151
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
+ G+Q+H Y++K+G SI+ +GNSL S+Y K+G AL + E N++++ +
Sbjct: 152 SCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTM 211
Query: 173 IAGFVENQQ-PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK 231
I+ E+++ E G +F ML G++P+ F+ + +C DL G + + K
Sbjct: 212 ISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIG 271
Query: 232 LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEK------ 285
E+N V N+ M LY + EA + F +E+ +I+WN I+ + D K
Sbjct: 272 CETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQAR 331
Query: 286 -----GLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV 340
L++F+++ ++PD FTF+SIL+ C+ + +++ G+QIHA I+ DV V
Sbjct: 332 SRGFQALTIFRDLKRSV-MKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVV 390
Query: 341 GNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGI 400
+ALVNMY KCG I + K F EM R V+W ++I+ ++ H A++LFE+M+ G+
Sbjct: 391 NSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGV 450
Query: 401 KPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
+P+ +TF+ LL+AC++AGLV+E E YF+ M+K Y I P ++H+ C+ID+ R G++ +A
Sbjct: 451 RPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAF 510
Query: 461 EYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDG 520
+ K+ + + +L++ CR ++ + A +L L+P Y+LL N+Y S
Sbjct: 511 SFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTE 570
Query: 521 MWGDVAGARKMLK--DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
W DVA RK++K D G+ ++ S+ I+ + F F + +H + E+ +L+ L
Sbjct: 571 RWQDVARVRKLMKQEDVGILRDRSWITIKDKVYF--FRANDRTHPQATELYQLLENL 625
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 214/426 (50%), Gaps = 21/426 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ + L+ C + + G +H +K G + + N + +LYAK G + A + F +
Sbjct: 141 TLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRI 200
Query: 64 SERNLVSWSAMISGHHQAGEHL-LALEFFSQMHL---LPNEYIFASAISACAGIQSLVKG 119
E+N+++W+ MIS + E + L + F M + +PNE+ S +S C L G
Sbjct: 201 PEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLG 260
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+ A+S K G + V NS + +Y++ G + +A+ ++ + + +++++NA+I+G+ +
Sbjct: 261 KQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQI 320
Query: 180 --------QQPEKGFE---VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV 228
Q +GF+ +F+ + R + PD F+F+ L +CS L +G +H T+
Sbjct: 321 MDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTI 380
Query: 229 KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLS 288
K S+ V + ++ +Y+K I +A KAF + + ++W + I+ S ++ +
Sbjct: 381 KSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQ 440
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNM 347
+F+EM GVRP++ TF S+L+AC+ V+ + + + + V +++M
Sbjct: 441 LFEEM-RLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDM 499
Query: 348 YAKCGLISCSYKLFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV- 405
+ + G + ++ N W++++A +H G L + K +KP +
Sbjct: 500 FVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSH--GNMELAFYAADKLLELKPKGIE 557
Query: 406 TFIGLL 411
T+I LL
Sbjct: 558 TYILLL 563
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 169/329 (51%), Gaps = 14/329 (4%)
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
+ DA ++ E N+V++ AL+ G+ N QP G EVF ML G P ++ L
Sbjct: 89 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 148
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
C S D+ G +H +K ES +GN++ +LY+K + A +AF I EK++I+W
Sbjct: 149 CLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITW 208
Query: 271 NTFIAACSHCAD-YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
T I+AC+ + E G+S+F +M D GV P++FT S+++ C + GKQ+ A
Sbjct: 209 TTMISACAEDEECVELGMSLFIDMLMD-GVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFS 267
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN-------- 381
++ ++ V N+ + +Y + G + +LF +M ++++WN +I+ +A
Sbjct: 268 FKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDD 327
Query: 382 ---HRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISP 438
G AL +F +K + +KPD TF +L+ C+ +++GE K+ G
Sbjct: 328 LQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKS-GFLS 386
Query: 439 DIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
D+ + L+++ + G + +A + + P
Sbjct: 387 DVVVNSALVNMYNKCGCIQDANKAFLEMP 415
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 186/578 (32%), Positives = 316/578 (54%), Gaps = 5/578 (0%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ ++S+LL + G +H V+KMG V V N +L +YA G+ A VF
Sbjct: 362 STTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFK 421
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVK 118
+M ++L+SW+++++ G L AL M N F SA++AC + K
Sbjct: 422 QMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDK 481
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ +H + G +GN+L+SMY K+G S + V + ++V++NALI G+ E
Sbjct: 482 GRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAE 541
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDL-RKGMILHCLTVKCKLESNPF 237
N+ P+K F+ + +G+ + + L C V DL +G LH V ES+
Sbjct: 542 NEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEH 601
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N+++ +Y+K + ++ F ++ + +I+WN +AA +H E+ L + +M +
Sbjct: 602 VKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRS-F 660
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G+ D F+F+ L+A A LA ++ G+Q+H +++ D + NA +MY+KCG I
Sbjct: 661 GLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEV 720
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
K+ ++R++ SWN +I+A H + F +M GIKP VTF+ LLTAC+H
Sbjct: 721 VKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHG 780
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV +G AY++ + K +G+ P IEH C+IDLLGR+G+L EAE + K P+ + +V +
Sbjct: 781 GLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRS 840
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL++C++ RD+ G + A+ L L+P S +VL SN++A+ G W DV RK + +
Sbjct: 841 LLASCKIHRDLDRGRKAAENLSKLEPEDDSVFVLSSNMFATTGRWEDVENVRKQMGFKNI 900
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KK+ + S ++++ F + + +H + EI L+ +
Sbjct: 901 KKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDI 938
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 137/516 (26%), Positives = 249/516 (48%), Gaps = 38/516 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+S ++ C K G + V+K G++ + V N +++++ G + A +F+++
Sbjct: 263 SMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQI 322
Query: 64 SERNLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
SER+ +SW+++++ + Q G E + H N ++ +S + G+
Sbjct: 323 SERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGR 382
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IH +K G+ S+ V N+L+ MY G S +A LV+ + +L+S+N+L+A FV +
Sbjct: 383 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDG 442
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ + M+R G + +F L C KG ILH L V L N +GN
Sbjct: 443 RSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGN 502
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++++Y K + + + + +D+++WN I + D +K L+ F+ + + GV
Sbjct: 503 ALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVE-GVS 561
Query: 301 PDDFTFASILAACAGLAS-VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+ T S+L+AC ++ GK +HA+++ D V N+L+ MYAKCG +S S
Sbjct: 562 ANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 621
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
LFN + +R++++WN I+AA+A+H G LKL +M++ G+ D +F L+A +
Sbjct: 622 LFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAV 681
Query: 420 VKEGEAY---------------FNSMEKTY---------------GISPDIEHFTCLIDL 449
++EG+ FN+ Y ++ + + LI
Sbjct: 682 LEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA 741
Query: 450 LGRAGKLLEA-EEYTKKFPLGQDP--IVLGTLLSAC 482
LGR G E E + + +G P + +LL+AC
Sbjct: 742 LGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTAC 777
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 235/461 (50%), Gaps = 5/461 (1%)
Query: 5 ISSLLHHCSKTKAL-QQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
I+SL+ C ++ ++ ++G+ +H V K G+ DV VS +L+LY G + +RKVF+EM
Sbjct: 162 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 221
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+RN+VSW++++ G+ GE ++ + M + NE + IS+C ++ G+
Sbjct: 222 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGR 281
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QI +K G S V NSLISM+ +G A ++ + E + +S+N+++A + +N
Sbjct: 282 QIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNG 341
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E+ +F LM R + + + L + + + G +H L VK +S V N
Sbjct: 342 HIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCN 401
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
T++ +Y+ EA+ F+ + KDLISWN+ +A+ + L + M G
Sbjct: 402 TLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRT-GKS 460
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ TF S LAAC G+ +H ++ L + +GNALV+MY K G +S S ++
Sbjct: 461 VNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRV 520
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
+M R+VV+WN +I +A + AL F+ ++ G+ + +T + +L+AC G +
Sbjct: 521 LLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDL 580
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
E ++ + G D LI + + G L +++
Sbjct: 581 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 621
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 210/398 (52%), Gaps = 5/398 (1%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G +LHA +K ++ V+ +N ++N+Y K G++ AR +FD+M RN VSW+ M+SG +
Sbjct: 77 GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVR 136
Query: 81 AGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVK-GQQIHAYSLKFGYASISF 136
G +L +EFF +M L P+ ++ AS ++AC S+ + G Q+H + K G S +
Sbjct: 137 VGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 196
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
V +++ +Y G S + V+ E + N+VS+ +L+ G+ + +PE+ +++K M +G
Sbjct: 197 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEG 256
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
+ + S + + C + D G + +K LES V N++++++ + A
Sbjct: 257 VECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYAN 316
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
F I E+D ISWN+ +AA + E+ +F M H + T +++L+ +
Sbjct: 317 YIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHD-EVNSTTVSTLLSVLGDV 375
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
+ G+ IH +++M + V V N L+ MYA G + +F +M ++++SWN+++
Sbjct: 376 DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLM 435
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
A+ N AL + M TG + VTF L AC
Sbjct: 436 ASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAAC 473
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 2/147 (1%)
Query: 322 GKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN 381
G+ +HA ++ + V N L+NMY K G + + LF++M RN VSWNT+++
Sbjct: 77 GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVR 136
Query: 382 HRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG-LVKEGEAYFNSMEKTYGISPDI 440
L ++ F++M GIKP S L+TAC +G + +EG + K+ G+ D+
Sbjct: 137 VGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKS-GLLSDV 195
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFP 467
T ++ L G G + + + ++ P
Sbjct: 196 YVSTAILHLYGVYGLVSCSRKVFEEMP 222
>gi|357481223|ref|XP_003610897.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512232|gb|AES93855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 774
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 203/595 (34%), Positives = 326/595 (54%), Gaps = 35/595 (5%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKM--GIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
L H C++ K ++QG++LH +L IQ D+ ++N++LN+Y KCG + AR +FD+M
Sbjct: 84 LFHACAQKKYIKQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQMPR 143
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM--HLLPNEYIFASAISACAGIQSLVKGQQIH 123
RN VSW+ ++SG+ Q G FS M PNE+ FAS + AC Q + G Q+H
Sbjct: 144 RNFVSWTVLVSGYAQFGLIRECFALFSGMLACFRPNEFAFASVLCACEE-QDVKYGLQVH 202
Query: 124 AYSLKFGYASISFVGNSLISMYMKVG---------YSSDALLVYGEAFEPNLVSFNALIA 174
A +LK +V N+LI+MY K + DA +V+ NL+S+N++I+
Sbjct: 203 AAALKMSLDFSVYVANALITMYSKCSGGFGGSCDQTTDDAWMVFKSMEYRNLISWNSMIS 262
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAG---GLEIC-SVSND------LRKGMILH 224
GF +K +F M G+ + + G L C S S+D L+ LH
Sbjct: 263 GFQFRGLGDKAIGLFAHMYCNGIRFNSTTLLGVLSSLNHCMSTSDDINNTHHLKNCFQLH 322
Query: 225 CLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLI----EEKDLISWNTFIAACSHC 280
CLTVK L S V ++ Y+ +L G F+L E D++SW I+ +
Sbjct: 323 CLTVKSGLISEVEVVTALVKSYA--DLGGHISDCFKLFLDTSGEHDIVSWTAIISVFAE- 379
Query: 281 ADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV 340
D E+ +F ++ ++ V D TF+ L ACA + ++ ++H+ +++ + D V
Sbjct: 380 RDPEQAFLLFCQLHRENFVL-DRHTFSIALKACAYFVTEKNATEVHSQVMKQGFHNDTVV 438
Query: 341 GNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGI 400
NAL++ Y + G ++ S ++F EM ++VSWN+++ ++A H AL LF+QM +
Sbjct: 439 SNALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQMD---V 495
Query: 401 KPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
PDS TF+ LL AC+HAGLV+EG FNSM +++GI+P ++H++C++DL GRAGK+ EAE
Sbjct: 496 HPDSATFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAE 555
Query: 461 EYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDG 520
E +K P+ D ++ +LL +CR + + + A + L P + Y+ +SN+Y+S G
Sbjct: 556 ELIRKMPMKPDSVIWSSLLGSCRKHGEADLAKLAADKFKVLDPKNSLAYIQMSNIYSSGG 615
Query: 521 MWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ + RK ++DS ++K P S +EV +FT H K I L+TL
Sbjct: 616 SFIEAGLIRKEMRDSKVRKRPGLSWVEVGKQVHEFTSGGQHHPKRQAILSRLETL 670
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S L C+ + +H+ V+K G D +VSN +++ Y + G + L+ +VF EM
Sbjct: 403 TFSIALKACAYFVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTEM 462
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQI 122
+LVSW++M+ + G AL+ F QM + P+ F + ++AC+ + +G QI
Sbjct: 463 GCHDLVSWNSMLKSYAIHGRAKDALDLFKQMDVHPDSATFVALLAACSHAGLVEEGTQI 521
>gi|357514793|ref|XP_003627685.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|358344437|ref|XP_003636296.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|358345563|ref|XP_003636846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502231|gb|AES83434.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502781|gb|AES83984.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521707|gb|AET02161.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 791
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 198/568 (34%), Positives = 318/568 (55%), Gaps = 18/568 (3%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G+ LH+ V+K G +V + N ++ +Y++ G + A +VF+EM+ R+LVSW+AM+SG+ Q
Sbjct: 206 GLQLHSLVVKCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQ 265
Query: 81 AGE--HLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS 135
GE L A+ F M +L + AISAC ++L G+QIH + K GY +
Sbjct: 266 EGECYGLEAVLLFGNMVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHV 325
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
V N LIS Y K DA V+ + N+VS+ LI+ EN +F M
Sbjct: 326 AVCNVLISTYSKCKVLRDAKAVFQDMSARNVVSWTTLISIDEENV-----VSLFNAMRVD 380
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
G+ P+ +F G L ++ N +++G+++H L +K L S V N+++ +Y+KF I E+
Sbjct: 381 GVYPNDVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQES 440
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
+K F + + ISWN I+ + ++ F +S ++P+ +TF S+L A A
Sbjct: 441 KKIFEELNYQGTISWNALISGYAQNGLCKEAFLTF--LSAIKEIKPNQYTFGSVLNAIAA 498
Query: 316 LA--SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
S++HG++ H+HLI++ LN D V AL++MY K G I+ S ++FNE + SW
Sbjct: 499 AEDISLKHGQRCHSHLIKLGLNTDPFVAGALLDMYGKRGNINESQRVFNETPEKTQFSWT 558
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT 433
+I+A+A H S + L+++++ G DS+TF+ +L AC G+V G F+SM K
Sbjct: 559 GMISAYARHGDYESVMSLYKEIEREGSNLDSITFLSVLAACCRKGMVDVGHIIFDSMVKK 618
Query: 434 YGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGER 493
+ I P EH++ ++D+LGR G+L EAEE + P G VL +LL +C+L +V + ER
Sbjct: 619 HSIEPTPEHYSIMVDMLGRVGRLDEAEELMHQIPGGPGLSVLQSLLGSCKLHGNVEMAER 678
Query: 494 LAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGT-- 551
+ L + P ++ PYVL++NLYA G W VA RK ++ G+KKE +S ++V
Sbjct: 679 VVDSLIQMDPGSSGPYVLMANLYAEKGNWEKVAEVRKGMRGRGVKKEVGFSWVDVANVDS 738
Query: 552 --FEKFTVAEFSHSKIGEINYMLKTLSL 577
F+ + SH + I+ M + L L
Sbjct: 739 LHLHGFSSGDKSHPESETIDRMAEFLGL 766
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 238/461 (51%), Gaps = 27/461 (5%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G +H V+ G V VSN ++ +Y K G+ LA VF+ +S ++VSW+ ++SG +
Sbjct: 103 GAQIHGFVVATGFVSRVTVSNSLMKMYCKAGRFELALCVFEGLSCPDIVSWNTILSGFEK 162
Query: 81 AGEHLLALEFFSQMHL---LPNEYIFASAISAC-----AGIQSLVKGQQIHAYSLKFGYA 132
+ + AL F MHL + + + +A+S C + G Q+H+ +K G+
Sbjct: 163 SVD---ALNFACFMHLNGVVFDPVTYTTALSFCWDRDYWDDHGFLFGLQLHSLVVKCGFG 219
Query: 133 SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE---VF 189
F+GN+L++MY + G +A V+ E +LVS+NA+++G+ + + G E +F
Sbjct: 220 CEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEGEC-YGLEAVLLF 278
Query: 190 KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF 249
M+R+G+L D S G + C + +L G +H L K ++ V N +++ YSK
Sbjct: 279 GNMVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKC 338
Query: 250 NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
++ +A+ F+ + ++++SW T I+ D E +S+F M D GV P+D TF +
Sbjct: 339 KVLRDAKAVFQDMSARNVVSWTTLIS-----IDEENVVSLFNAMRVD-GVYPNDVTFIGL 392
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
L A V+ G +H ++ L+ + V N+L+ MYAK I S K+F E+ ++
Sbjct: 393 LHAITIRNMVKEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESKKIFEELNYQGT 452
Query: 370 VSWNTIIAAHANHRLGGSA-LKLFEQMKATGIKPDSVTFIGLLTACNHAGLV--KEGEAY 426
+SWN +I+ +A + L A L +K IKP+ TF +L A A + K G+
Sbjct: 453 ISWNALISGYAQNGLCKEAFLTFLSAIKE--IKPNQYTFGSVLNAIAAAEDISLKHGQRC 510
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+ + K G++ D L+D+ G+ G + E++ + P
Sbjct: 511 HSHLIK-LGLNTDPFVAGALLDMYGKRGNINESQRVFNETP 550
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 169/350 (48%), Gaps = 25/350 (7%)
Query: 87 ALEFFSQMHLLP-----NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSL 141
AL F P +E A + AC G + G QIH + + G+ S V NSL
Sbjct: 68 ALSVFKNQTQFPFLQNIDEVTLALSFKACRG--EFILGAQIHGFVVATGFVSRVTVSNSL 125
Query: 142 ISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDR 201
+ MY K G AL V+ P++VS+N +++GF E F F M G++ D
Sbjct: 126 MKMYCKAGRFELALCVFEGLSCPDIVSWNTILSGF-EKSVDALNFACF--MHLNGVVFDP 182
Query: 202 FSFAGGLEICSVSNDLRK-----GMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
++ L C + G+ LH L VKC F+GN ++ +YS++ + EA
Sbjct: 183 VTYTTALSFCWDRDYWDDHGFLFGLQLHSLVVKCGFGCEVFIGNALVTMYSRWGGLDEAG 242
Query: 257 KAFRLIEEKDLISWNTFIAACSH---CADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
+ F + +DL+SWN ++ + C E L +F M + G+ D + ++AC
Sbjct: 243 RVFNEMTIRDLVSWNAMLSGYAQEGECYGLEAVL-LFGNMVRE-GMLLDHVSLTGAISAC 300
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
+++ GKQIH ++ V V N L++ Y+KC ++ + +F +M RNVVSW
Sbjct: 301 GYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKCKVLRDAKAVFQDMSARNVVSWT 360
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
T+I+ + + LF M+ G+ P+ VTFIGLL A +VKEG
Sbjct: 361 TLISIDEE-----NVVSLFNAMRVDGVYPNDVTFIGLLHAITIRNMVKEG 405
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 172/326 (52%), Gaps = 16/326 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S++ + C TK L+ G +H K+G V V N +++ Y+KC + A+ VF +M
Sbjct: 292 SLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKCKVLRDAKAVFQDM 351
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK-G 119
S RN+VSW+ +IS E++++L F+ M + PN+ F + A I+++VK G
Sbjct: 352 SARNVVSWTTLISIDE---ENVVSL--FNAMRVDGVYPNDVTFIGLLHAIT-IRNMVKEG 405
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+H LK +S V NSLI+MY K ++ ++ E +S+NALI+G+ +N
Sbjct: 406 LMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESKKIFEELNYQGTISWNALISGYAQN 465
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSND--LRKGMILHCLTVKCKLESNPF 237
++ F F +++ + P++++F L + + D L+ G H +K L ++PF
Sbjct: 466 GLCKEAFLTFLSAIKE-IKPNQYTFGSVLNAIAAAEDISLKHGQRCHSHLIKLGLNTDPF 524
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V ++ +Y K I E+++ F EK SW I+A + DYE +S++KE+ +
Sbjct: 525 VAGALLDMYGKRGNINESQRVFNETPEKTQFSWTGMISAYARHGDYESVMSLYKEIERE- 583
Query: 298 GVRPDDFTFASILAACA--GLASVQH 321
G D TF S+LAAC G+ V H
Sbjct: 584 GSNLDSITFLSVLAACCRKGMVDVGH 609
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 118/264 (44%), Gaps = 15/264 (5%)
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
+PN S N + F+ P + VFK + L + L + + G
Sbjct: 46 QPNASSINRSMLNFLHKNLPFQALSVFKNQTQFPFLQNIDEVTLALSFKACRGEFILGAQ 105
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
+H V S V N++M +Y K A F + D++SWNT ++
Sbjct: 106 IHGFVVATGFVSRVTVSNSLMKMYCKAGRFELALCVFEGLSCPDIVSWNTILSG------ 159
Query: 283 YEKGLSV--FKEMSNDHGVRPDDFTFASILAACAGLASVQH-----GKQIHAHLIRMRLN 335
+EK + F + +GV D T+ + L+ C G Q+H+ +++
Sbjct: 160 FEKSVDALNFACFMHLNGVVFDPVTYTTALSFCWDRDYWDDHGFLFGLQLHSLVVKCGFG 219
Query: 336 QDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR--LGGSALKLFE 393
+V +GNALV MY++ G + + ++FNEM R++VSWN +++ +A G A+ LF
Sbjct: 220 CEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLEAVLLFG 279
Query: 394 QMKATGIKPDSVTFIGLLTACNHA 417
M G+ D V+ G ++AC +
Sbjct: 280 NMVREGMLLDHVSLTGAISACGYT 303
>gi|413933941|gb|AFW68492.1| hypothetical protein ZEAMMB73_143921 [Zea mays]
Length = 564
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 190/544 (34%), Positives = 304/544 (55%), Gaps = 17/544 (3%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQP-DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVS 70
C +T +++G +LHA +L G ++NH++ +Y+ C + A +VF + NLVS
Sbjct: 27 CGRTGDIRRGRALHARLLLTGAAAASTFLANHLITMYSHCADAVSAVRVFGVVPRPNLVS 86
Query: 71 WSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSL 127
W+ ++SG Q H AL F+ M H+ P ++ +SA A A + + G Q+H +
Sbjct: 87 WTTLVSGLVQNSMHHDALAAFAAMRRAHIAPTQFALSSAARAAAALSAPRPGTQLHCIGI 146
Query: 128 KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE 187
+ G+ + FV ++L MY K G +A V+ + + + V++ +I G+ +N E
Sbjct: 147 RLGFDNELFVASNLADMYSKCGLLHEACRVFDQMPQKDAVTWTTMIDGYAKNGSLEAAIL 206
Query: 188 VFKLMLRQGLL-PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
+F+ M +GL+ D+ F L D G LHC +K E V N ++ +Y
Sbjct: 207 IFRDMKCEGLVGADQHVFCSALSASGGLKDGWFGRSLHCCIIKAGFELETVVRNALLDMY 266
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY------EKGLSVFKEMSNDHGVR 300
+K G+ E A R++ D WN ++A S Y E+ L + E+ GV
Sbjct: 267 AKS---GDLENASRVVS-IDPGGWNV-VSATSLIDGYVEAGRIEEALETYTELGR-QGVE 320
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P++FTFAS++ CA ++ G Q+HA +++ L D VG+ LV MY CGLIS S +L
Sbjct: 321 PNEFTFASMIKGCAMHDLLEQGAQLHAQVLKTNLISDSFVGSTLVYMYGNCGLISLSLQL 380
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FNE+ +R ++WN +I +A H G A++ F++M ++GI+P+ +TF+ LLTAC+HAGLV
Sbjct: 381 FNEIGYRTEIAWNAVINVYAQHGHGWGAIQAFDRMTSSGIRPNHITFVCLLTACSHAGLV 440
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG YF+SM+ +GI P EH++C+ID+ GRAG+L EAE++ + P+ +LL
Sbjct: 441 DEGLGYFHSMKDAHGIEPKAEHYSCIIDMYGRAGRLDEAEKFISEMPVKPSAYAWCSLLG 500
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR++ + +GE A+ L L P T ++ LS +Y S G W DV +K +KD +KK
Sbjct: 501 ACRMQGNKELGEVAAQNLMKLDPNNTGIHISLSGIYTSLGQWEDVKAVKKSMKDISIKKL 560
Query: 541 PSYS 544
P +S
Sbjct: 561 PGFS 564
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 162/331 (48%), Gaps = 2/331 (0%)
Query: 109 ACAGIQSLVKGQQIHAYSLKFGYASIS-FVGNSLISMYMKVGYSSDALLVYGEAFEPNLV 167
+C + +G+ +HA L G A+ S F+ N LI+MY + A+ V+G PNLV
Sbjct: 26 SCGRTGDIRRGRALHARLLLTGAAAASTFLANHLITMYSHCADAVSAVRVFGVVPRPNLV 85
Query: 168 SFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLT 227
S+ L++G V+N F M R + P +F+ + + + R G LHC+
Sbjct: 86 SWTTLVSGLVQNSMHHDALAAFAAMRRAHIAPTQFALSSAARAAAALSAPRPGTQLHCIG 145
Query: 228 VKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGL 287
++ ++ FV + + +YSK L+ EA + F + +KD ++W T I + E +
Sbjct: 146 IRLGFDNELFVASNLADMYSKCGLLHEACRVFDQMPQKDAVTWTTMIDGYAKNGSLEAAI 205
Query: 288 SVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNM 347
+F++M + V D F S L+A GL G+ +H +I+ + V NAL++M
Sbjct: 206 LIFRDMKCEGLVGADQHVFCSALSASGGLKDGWFGRSLHCCIIKAGFELETVVRNALLDM 265
Query: 348 YAKCGLISCSYKLFN-EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVT 406
YAK G + + ++ + + NVVS ++I + AL+ + ++ G++P+ T
Sbjct: 266 YAKSGDLENASRVVSIDPGGWNVVSATSLIDGYVEAGRIEEALETYTELGRQGVEPNEFT 325
Query: 407 FIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
F ++ C L+++G + KT IS
Sbjct: 326 FASMIKGCAMHDLLEQGAQLHAQVLKTNLIS 356
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 169/372 (45%), Gaps = 39/372 (10%)
Query: 211 CSVSNDLRKGMILHC-LTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
C + D+R+G LH L + ++ F+ N ++ +YS A + F ++ +L+S
Sbjct: 27 CGRTGDIRRGRALHARLLLTGAAAASTFLANHLITMYSHCADAVSAVRVFGVVPRPNLVS 86
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
W T ++ + + L+ F M H + P F +S A A L++ + G Q+H
Sbjct: 87 WTTLVSGLVQNSMHHDALAAFAAMRRAH-IAPTQFALSSAARAAAALSAPRPGTQLHCIG 145
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
IR+ + ++ V + L +MY+KCGL+ + ++F++M ++ V+W T+I +A + +A+
Sbjct: 146 IRLGFDNELFVASNLADMYSKCGLLHEACRVFDQMPQKDAVTWTTMIDGYAKNGSLEAAI 205
Query: 390 KLFEQMKATG-IKPDSVTFIGLLTACN-----------HAGLVKEG----EAYFNSMEKT 433
+F MK G + D F L+A H ++K G N++
Sbjct: 206 LIFRDMKCEGLVGADQHVFCSALSASGGLKDGWFGRSLHCCIIKAGFELETVVRNALLDM 265
Query: 434 YGISPDIEH----------------FTCLIDLLGRAGKLLEA-EEYTKKFPLGQDP--IV 474
Y S D+E+ T LID AG++ EA E YT+ G +P
Sbjct: 266 YAKSGDLENASRVVSIDPGGWNVVSATSLIDGYVEAGRIEEALETYTELGRQGVEPNEFT 325
Query: 475 LGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKD 534
+++ C + + G +L Q+ L+ S + S L G G ++ + ++ +
Sbjct: 326 FASMIKGCAMHDLLEQGAQLHAQV--LKTNLISDSFVGSTLVYMYGNCGLISLSLQLFNE 383
Query: 535 SGLKKEPSYSMI 546
G + E +++ +
Sbjct: 384 IGYRTEIAWNAV 395
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S++ C+ L+QG LHA VLK + D V + ++ +Y CG + L+ ++F+E+
Sbjct: 325 TFASMIKGCAMHDLLEQGAQLHAQVLKTNLISDSFVGSTLVYMYGNCGLISLSLQLFNEI 384
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
R ++W+A+I+ + Q G A++ F +M + PN F ++AC+
Sbjct: 385 GYRTEIAWNAVINVYAQHGHGWGAIQAFDRMTSSGIRPNHITFVCLLTACS 435
>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 615
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 190/564 (33%), Positives = 304/564 (53%), Gaps = 11/564 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C+ ++Q G LH VLK+G Q D V ++++Y+KC + AR+VFDEM +R+
Sbjct: 52 LLKACANLPSIQHGTMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRS 111
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSL---VKGQQ 121
+VSW+AM+S + + AL +M +L P F S +S + + S + G+
Sbjct: 112 VVSWNAMVSAYSRRSSMDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKS 171
Query: 122 IHAYSLKFG--YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
IH +K G Y +S + NSL+ MY++ +A V+ E +++S+ +I G+V+
Sbjct: 172 IHCCLIKLGIVYLEVS-LANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKI 230
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ + +F M Q + D F + C DL +H L +KC V
Sbjct: 231 GHAVEAYGLFYQMQHQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVE 290
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N ++ +Y+K + A + F LI EK ++SW + IA H + L +F+ M +
Sbjct: 291 NLLITMYAKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTD-I 349
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
RP+ T A++++ACA L S+ G++I ++ L D V +L++MY+KCG I + +
Sbjct: 350 RPNGATLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKARE 409
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK-ATGIKPDSVTFIGLLTACNHAG 418
+F + +++ W ++I ++A H +G A+ LF +M A GI PD++ + + AC+H+G
Sbjct: 410 VFERVTDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSG 469
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV+EG YF SM+K +GI+P +EH TCLIDLLGR G+L A + P V G L
Sbjct: 470 LVEEGLKYFKSMQKDFGITPTVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWGPL 529
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
LSACR+ +V +GE +L P ++ YVL++NLY S G W + R + GL
Sbjct: 530 LSACRIHGNVELGELATVRLLDSSPGSSGSYVLMANLYTSLGKWKEAHMMRNSMDGKGLV 589
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSH 562
KE +S +EV T+ F V S
Sbjct: 590 KESGWSQVEVTDTYHTFAVGNQSQ 613
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 205/418 (49%), Gaps = 29/418 (6%)
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQ 121
R+L +W+ MI G L +S M + N + + ACA + S+ G
Sbjct: 8 RRSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTM 67
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H + LK G+ + +FV +L+ MY K + + A V+ E + ++VS+NA+++ +
Sbjct: 68 LHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSS 127
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRK------GMILHCLTVK---CKL 232
++ + K M G P +F + I S ++L G +HC +K L
Sbjct: 128 MDQALSLLKEMWVLGFEPTASTF---VSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYL 184
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
E + + N++M +Y +F L+ EA K F L++EK +ISW T I + +F +
Sbjct: 185 EVS--LANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQ 242
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
M + V D F ++++ C + + +H+ +++ N+ V N L+ MYAKCG
Sbjct: 243 MQH-QSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCG 301
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
++ + ++F+ ++ ++++SW ++IA + + G AL LF +M T I+P+ T +++
Sbjct: 302 NLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVS 361
Query: 413 ACNHAGLVKEGEA-----YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKK 465
AC G + G+ + N G+ D + T LI + + G +++A E ++
Sbjct: 362 ACADLGSLSIGQEIEEYIFLN------GLESDQQVQTSLIHMYSKCGSIVKAREVFER 413
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 132/258 (51%), Gaps = 5/258 (1%)
Query: 161 AFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKG 220
+F +L ++N +I N + ++ M G+ + ++ L+ C+ ++ G
Sbjct: 6 SFRRSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHG 65
Query: 221 MILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHC 280
+LH +K +++ FV ++ +YSK + + A + F + ++ ++SWN ++A S
Sbjct: 66 TMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRR 125
Query: 281 ADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQH---GKQIHAHLIRMRLNQ- 336
+ ++ LS+ KEM G P TF SIL+ + L S + GK IH LI++ +
Sbjct: 126 SSMDQALSLLKEMWV-LGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYL 184
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
+V + N+L+ MY + L+ + K+F+ M ++++SW T+I + A LF QM+
Sbjct: 185 EVSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQ 244
Query: 397 ATGIKPDSVTFIGLLTAC 414
+ D V F+ L++ C
Sbjct: 245 HQSVGIDFVVFLNLISGC 262
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 113/219 (51%), Gaps = 4/219 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+L+ C + + L S+H+ VLK G V N ++ +YAKCG + AR++FD + E+
Sbjct: 257 NLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTSARRIFDLIIEK 316
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
+++SW++MI+G+ G AL+ F +M + PN A+ +SACA + SL GQ+I
Sbjct: 317 SMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACADLGSLSIGQEIE 376
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
Y G S V SLI MY K G A V+ + +L + ++I + +
Sbjct: 377 EYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWTSMINSYAIHGMGN 436
Query: 184 KGFEVF-KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
+ +F K+ +G++PD + CS S + +G+
Sbjct: 437 EAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGL 475
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++++++ C+ +L G + + G++ D V ++++Y+KCG ++ AR+VF+ +
Sbjct: 355 TLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERV 414
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACA 111
++++L W++MI+ + G A+ F +M ++P+ ++ S AC+
Sbjct: 415 TDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACS 466
>gi|357490167|ref|XP_003615371.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355516706|gb|AES98329.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 765
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 187/565 (33%), Positives = 305/565 (53%), Gaps = 17/565 (3%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C + + +H ++K G D +S+ ++ +YAKCG+M A++VFD M+ RN
Sbjct: 79 LLQQCLENCSFSSTQIIHCHIVKTGSHEDPFLSSFLVTVYAKCGRMECAQQVFDHMNRRN 138
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHL----LPNEYIFASAISACAGIQSLVKGQQIH 123
V+W+ ++ G+ Q A+ F +M L P+ Y A A++AC + SL G+Q+H
Sbjct: 139 AVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLAIALNACTSLHSLKLGEQLH 198
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDA-LLVYGEAFEPNLVSFNALIAGFVENQQP 182
AY +K+ + +GN+L S+Y K G + L + E +++S+ A I+ E +
Sbjct: 199 AYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIKEKDVISWTAAISACGEKGEA 258
Query: 183 EKGFEVFKLML--RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
KG VF ML + P+ ++ L C L G+ +H L K ESN V N
Sbjct: 259 MKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELGIQVHALCTKLGYESNLRVRN 318
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD--------YEKGLSVFKE 292
+++ LY K I EA++ F+ + + +L++WN IA + + Y+KG+
Sbjct: 319 SLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHAQMMELSKDNLSAYQKGIEALNL 378
Query: 293 MS--NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
S N G++PD FTF+S+L+ C+ + +++ G+QIHA I+ DV VG++++NMY K
Sbjct: 379 FSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGSSMINMYNK 438
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGL 410
CG I + K+F EM R ++ W T+I A H AL LFE MK GI+P+ VTF+G+
Sbjct: 439 CGSIERASKVFLEMSIRTMILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGV 498
Query: 411 LTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQ 470
L+AC AG+V E YF M+K Y I P ++H+ CL+D+L R G++ EA + KK
Sbjct: 499 LSACGSAGMVNEAFNYFEIMQKEYKIKPVMDHYVCLVDMLVRLGQVQEAFDLIKKMDYKA 558
Query: 471 DPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARK 530
+ L+ C + ++ +G A++L L+P T Y LL N Y S G + DV+
Sbjct: 559 SEFIWSNLIVGCLSQGNLELGCDAAEKLLSLKPKDTETYKLLLNAYVSAGRYDDVSRVEN 618
Query: 531 MLKDSGLKKEPSYSMIEVQGTFEKF 555
++++ + + +S I ++ F
Sbjct: 619 IMREEKIGELKDWSWISIKDRVYSF 643
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 168/318 (52%), Gaps = 23/318 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++S L C + K L+ GI +HA K+G + ++ V N +L LY KCG ++ A+++F M
Sbjct: 281 TLTSALSQCCEVKCLELGIQVHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGM 340
Query: 64 SERNLVSWSAMISGHHQAGE-----------HLLALEFFSQMH---LLPNEYIFASAISA 109
++ NLV+W+AMI+GH Q E + AL FS+++ + P+ + F+S +S
Sbjct: 341 NDVNLVTWNAMIAGHAQMMELSKDNLSAYQKGIEALNLFSKLNRSGMKPDPFTFSSVLSV 400
Query: 110 CAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSF 169
C+ + +L +G+QIHA ++K G+ S VG+S+I+MY K G A V+ E ++ +
Sbjct: 401 CSKMMALEQGEQIHARTIKTGFLSDVVVGSSMINMYNKCGSIERASKVFLEMSIRTMILW 460
Query: 170 NALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK 229
+I GF ++ ++ +F+ M G+ P+ +F G L C + + + + K
Sbjct: 461 TTMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVLSACGSAGMVNEAFNYFEIMQK 520
Query: 230 CKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS----WNTFIAACSHCADYEK 285
+ + P + + + L +G+ ++AF LI++ D + W+ I C + E
Sbjct: 521 -EYKIKPVMDHYV-CLVDMLVRLGQVQEAFDLIKKMDYKASEFIWSNLIVGCLSQGNLEL 578
Query: 286 GLSVFKEMSNDHGVRPDD 303
G +++ + ++P D
Sbjct: 579 GCDAAEKLLS---LKPKD 593
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 107/238 (44%), Gaps = 13/238 (5%)
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
+++ S+ KE SN+ D + +L C S + IH H+++ ++D + +
Sbjct: 57 FQEAFSLAKE-SNE---EVDSSFYPPLLQQCLENCSFSSTQIIHCHIVKTGSHEDPFLSS 112
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA-TGIK 401
LV +YAKCG + C+ ++F+ M RN V+W ++ + + + A+ LFE+M +
Sbjct: 113 FLVTVYAKCGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECY 172
Query: 402 PDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
P + T L AC +K GE + K Y + D L L + G LE
Sbjct: 173 PSNYTLAIALNACTSLHSLKLGEQLHAYIIK-YHVDFDTSIGNALCSLYTKCGGKLEVGL 231
Query: 462 YTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLF----HLQPTTTSPYVLLSNL 515
+ +D I +SAC + + + G R+ ++ +QP + Y L S L
Sbjct: 232 TAFRRIKEKDVISWTAAISACGEKGEAMKGVRVFVEMLLDEVQVQP---NEYTLTSAL 286
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 206/597 (34%), Positives = 313/597 (52%), Gaps = 38/597 (6%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDV-IVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+ HC ++ + L + L++ P+ + H L + + AR +FD+M ER+
Sbjct: 1 MEHCHHQPHAKRTMRLRSPPLQLHASPEFDFLERHDLRGCVRYRNLRAARLLFDQMPERD 60
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHA--- 124
+VSW+AM+SG+ Q G A E F +M ++IS + + V+ +I
Sbjct: 61 VVSWNAMLSGYAQNGYVKEAKEIFDEMPC-------KNSISWNGMLAAYVQNGRIEDARR 113
Query: 125 -YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN---- 179
+ K + IS+ N ++ Y+K DA ++ E + VS+N +I+G+ +N
Sbjct: 114 LFESKADWELISW--NCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELL 171
Query: 180 -------QQPEKGFEVFKLML----RQGLLPD-RFSFAGGLEICSVSNDLRKGMILHCLT 227
+ P + + M+ + G+L + R F G E SVS + + C
Sbjct: 172 EAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKR 231
Query: 228 VKCKLE-------SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHC 280
+ E N NT++ Y++ I +A F + ++D ISW IA +
Sbjct: 232 MDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQS 291
Query: 281 ADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV 340
E+ L +F EM D G R + TF S L+ CA +A+++ GKQ+H +++ L V
Sbjct: 292 GYGEEALHLFVEMKRD-GERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYV 350
Query: 341 GNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGI 400
GNAL+ MY KCG I +Y +F + + VVSWNT+IA +A H G AL LFE MK TGI
Sbjct: 351 GNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGI 410
Query: 401 KPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
PD VT +G+L+AC+H GLV +G YF SM + YGI+ + +H+TC+IDLLGRAG+L +A+
Sbjct: 411 LPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQ 470
Query: 461 EYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDG 520
K P D G LL A R+ + +GE+ AK +F ++P + YVLLSNLYA+ G
Sbjct: 471 NLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASG 530
Query: 521 MWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
WGDV R ++D G+KK P YS +EVQ FTV + H + I L+ L L
Sbjct: 531 RWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDL 587
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 7/202 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S L C++ AL+ G +H V+K G++ V N +L +Y KCG + A VF+ +
Sbjct: 315 TFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGI 374
Query: 64 SERNLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
E+ +VSW+ MI+G+ + G E L+ E + +LP++ +SAC+ + KG
Sbjct: 375 EEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGT 434
Query: 121 Q-IHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIAGFVE 178
+ ++ + +G + S +I + + G DA L+ FEP+ ++ AL+
Sbjct: 435 EYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRI 494
Query: 179 NQQPEKGFEVFKLMLRQGLLPD 200
+ E G + K++ + PD
Sbjct: 495 HGNTELGEKAAKMIFE--MEPD 514
>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 912
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 181/556 (32%), Positives = 318/556 (57%), Gaps = 6/556 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL S L G LHA ++ G + ++++ V+++Y+KC +M+ A KV + E +
Sbjct: 224 LLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYD 283
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHA 124
+ W+ +ISG Q + A+ F M L LPN + ++S ++A + I SL G+Q H+
Sbjct: 284 VYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHS 343
Query: 125 YSLKFGYASISFVGNSLISMYMKVGY-SSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ G ++GN+L+ MYMK + +++A+ V+ E PN++ + +LIAGF E ++ E
Sbjct: 344 RVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAE-KRLE 402
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
F++F M G+ P+ F+ + L CS + L M+LH +K K++ + V N ++
Sbjct: 403 DSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALV 462
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
Y+ +I EA + +D I++ A + + L V M ND G++ D+
Sbjct: 463 DTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARLNQKGHHGMALKVLIHMCND-GIKMDE 521
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
F+ AS L+A AGL +++ GKQ+H + ++ + V N+LV++Y+KCG I + + F +
Sbjct: 522 FSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKD 581
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
+ + SWN +I+ + + L AL F+ M+ G+KPDS+T + L++AC+H GL++ G
Sbjct: 582 ISEPDAFSWNGLISGFSWNGLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELG 641
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
YF+SM+K Y I+P ++H+ CL+DLLGR G+L EA +K D ++ TLL+AC
Sbjct: 642 LEYFHSMQKEYHITPKLDHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNACN 701
Query: 484 LRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSY 543
L +V +GE +A++ L P+ + Y+LL+NLY + G+ R+++++ GL++ P
Sbjct: 702 LHGNVALGEDMARRCLELDPSDPAIYLLLANLYDNAGLSDFGEKTRRLMRERGLRRSPGQ 761
Query: 544 SMIEVQGTFEKFTVAE 559
+E++ F+ E
Sbjct: 762 CWMEIRSRVHHFSAGE 777
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 136/413 (32%), Positives = 232/413 (56%), Gaps = 20/413 (4%)
Query: 15 TKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAM 74
+ +L++GI +H+ ++K+G+Q D+ ++N++L+LYAK + AR +FDEM R++VSW+ +
Sbjct: 27 SNSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTI 86
Query: 75 ISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGY 131
+S H + H AL+ F M PNE+ +SA+ +C + +G QIH ++K G
Sbjct: 87 LSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAVKLGL 146
Query: 132 ASISFVGNSLISMYMKVGYSSDALLVYGEAFE--------PNLVSFNALIAGFVENQQPE 183
FVG SL+ Y K G S EA++ ++VS+ +++ VEN +
Sbjct: 147 EMNRFVGTSLVEFYTKCGCCS------VEAWKLLSLVKDGGDVVSWTTMLSSLVENGKWG 200
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ FE++ M+ G+ P+ F+F L S L G +LH + E N + ++
Sbjct: 201 EAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVV 260
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+YSK + +A K L E D+ W T I+ + + +SVF++M G+ P++
Sbjct: 261 DMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELS-GLLPNN 319
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC-SYKLFN 362
FT++S+L A + + S+ G+Q H+ +I + L D+ +GNALV+MY KC I+ + K+F
Sbjct: 320 FTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFR 379
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
E+ NV+ W ++IA A RL S +LF +M+A G++P+S T +L AC+
Sbjct: 380 EITSPNVMCWTSLIAGFAEKRLEDS-FQLFAEMQAAGVRPNSFTMSAILGACS 431
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 216/428 (50%), Gaps = 10/428 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKM-ILARKVFDE 62
++SS L C ++G+ +H + +K+G++ + V ++ Y KCG + A K+
Sbjct: 117 TLSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSL 176
Query: 63 MSER-NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
+ + ++VSW+ M+S + G+ A E + +M + PNE+ F + A + L
Sbjct: 177 VKDGGDVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSY 236
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ +HA+ + FG + +++ MY K DA+ V E ++ + LI+GF +
Sbjct: 237 GKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQ 296
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N Q + VF+ M GLLP+ F+++ L S L G H + LE + ++
Sbjct: 297 NLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYI 356
Query: 239 GNTIMALYSKFN-LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
GN ++ +Y K + + A K FR I +++ W + IA + E +F EM
Sbjct: 357 GNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAE-KRLEDSFQLFAEM-QAA 414
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
GVRP+ FT ++IL AC+ S+ +H H+I+ +++ D+ V NALV+ YA G+I +
Sbjct: 415 GVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEA 474
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHR-LGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ + M R+ +++ T +AA N + G ALK+ M GIK D + L+A
Sbjct: 475 WSVIGTMNLRDSITY-TCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAG 533
Query: 417 AGLVKEGE 424
G ++ G+
Sbjct: 534 LGTMETGK 541
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 171/338 (50%), Gaps = 4/338 (1%)
Query: 114 QSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALI 173
SL +G IH+ +K G ++ N+L+S+Y K A ++ E ++VS+ ++
Sbjct: 28 NSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTIL 87
Query: 174 AGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE 233
+ + + ++F +M+ G P+ F+ + L C + +GM +HC VK LE
Sbjct: 88 SSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAVKLGLE 147
Query: 234 SNPFVGNTIMALYSKFNLIG-EAEKAFRLIEEK-DLISWNTFIAACSHCADYEKGLSVFK 291
N FVG +++ Y+K EA K L+++ D++SW T +++ + + ++
Sbjct: 148 MNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKWGEAFEIYV 207
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
+M + GV P++FTF +L A + + +GK +HAHLI ++ + A+V+MY+KC
Sbjct: 208 KMI-ESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYSKC 266
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
+ + K+ N +V W T+I+ + A+ +F M+ +G+ P++ T+ LL
Sbjct: 267 RRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSLL 326
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
A + + GE F+S G+ D+ L+D+
Sbjct: 327 NASSSILSLDLGEQ-FHSRVIIVGLEDDLYIGNALVDM 363
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S++S L + ++ G LH +K G Q VSN +++LY+KCG + A + F ++
Sbjct: 523 SLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDI 582
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACA 111
SE + SW+ +ISG G AL F M L P+ S ISAC+
Sbjct: 583 SEPDAFSWNGLISGFSWNGLISHALSTFDDMRLAGVKPDSITLLSLISACS 633
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 184/571 (32%), Positives = 315/571 (55%), Gaps = 34/571 (5%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+LL C+ + Q + ++K+G +IV N +++ Y K ++ LA ++F EM E
Sbjct: 149 TLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPE- 207
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYS 126
+ + FA+ + A G+ +V GQQIH++
Sbjct: 208 -------------------------------IDSFTFAAVLCANIGLDDIVLGQQIHSFV 236
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
+K + FV N+L+ Y K DA ++ E E + VS+N +I+G+ + + + F
Sbjct: 237 IKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAF 296
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
++F+ + +F FA L I S + D G +H T+ +S VGN+++ +Y
Sbjct: 297 DLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMY 356
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
+K EAE F + + + W I+A YE+GL +F +M V D TF
Sbjct: 357 AKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQ-ASVIADQATF 415
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
AS+L A A +AS+ GKQ+H+ +I+ +V G+AL+++YAKCG I + + F EM
Sbjct: 416 ASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPD 475
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
RN+VSWN +I+A+A + + LK F++M +G++PDSV+F+G+L+AC+H+GLV+EG +
Sbjct: 476 RNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWH 535
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRR 486
FNSM + Y + P EH+ ++D+L R+G+ EAE+ + P+ D I+ ++L+ACR+ +
Sbjct: 536 FNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHK 595
Query: 487 DVVIGERLAKQLFHLQP-TTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSM 545
+ + R A QLF+++ +PYV +SN+YA+ G W +V+ K ++D G+KK P+YS
Sbjct: 596 NQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSW 655
Query: 546 IEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
+E++ F+ + H +I EI + L+
Sbjct: 656 VEIKHETHMFSANDRCHPQIEEIRKKIDMLT 686
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 202/435 (46%), Gaps = 40/435 (9%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH 95
+ + +N +++ Y K G + ARK+FD M ER V+W+ +I G+ Q + A E F QM
Sbjct: 77 NTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQ 136
Query: 96 LL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSS 152
P+ F + +S C G + + Q+ +K GY S VGN+L+ Y K S
Sbjct: 137 RCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCK----S 192
Query: 153 DALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
+ L + + F+ + PE D F+FA L
Sbjct: 193 NRLDLACQLFK----------------EMPE---------------IDSFTFAAVLCANI 221
Query: 213 VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNT 272
+D+ G +H +K N FV N ++ YSK + + +A K F + E+D +S+N
Sbjct: 222 GLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNV 281
Query: 273 FIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
I+ + ++ +F+E+ R F FA++L+ + + G+QIHA I
Sbjct: 282 IISGYAWDGKHKYAFDLFRELQFTAFDRK-QFPFATMLSIASNTLDWEMGRQIHAQTIVT 340
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
+ ++ VGN+LV+MYAKCG + +F + HR+ V W +I+A+ L+LF
Sbjct: 341 TADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLF 400
Query: 393 EQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
+M+ + D TF LL A + G+ + + K+ G ++ + L+D+ +
Sbjct: 401 NKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKS-GFMSNVFSGSALLDVYAK 459
Query: 453 AGKLLEAEEYTKKFP 467
G + +A + ++ P
Sbjct: 460 CGSIKDAVQTFQEMP 474
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 190/421 (45%), Gaps = 59/421 (14%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+++L S T + G +HA + +++V N ++++YAKCGK A +F ++
Sbjct: 315 ATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTH 374
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
R+ V W+AMIS + Q G + L+ F++M ++ ++ FAS + A A I SL G+Q+
Sbjct: 375 RSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQL 434
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H++ +K G+ S F G++L+ +Y K G DA+ + E + N+VS+NA+I+ + +N +
Sbjct: 435 HSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEA 494
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI-LHCLTVKCKLESNPFVGNT 241
E + FK M+ GL PD SF G L CS S + +G+ + +T KL+ +
Sbjct: 495 EATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYAS 554
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ + + EAEK + EM D P
Sbjct: 555 VVDMLCRSGRFNEAEK-------------------------------LMAEMPID----P 579
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D+ ++S+L AC + + ++ L M +D + N+YA G K+
Sbjct: 580 DEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVH 639
Query: 362 NEMLHRNV-----VSWNTIIAAHANHRLGGSAL-------------KLFEQMKATGIKPD 403
M R V SW I H H + L + M+ G KPD
Sbjct: 640 KAMRDRGVKKLPAYSWVEI--KHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPD 697
Query: 404 S 404
+
Sbjct: 698 T 698
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +SLL + +L G LH+ ++K G +V + +L++YAKCG + A + F EM
Sbjct: 414 TFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEM 473
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
+RN+VSW+AMIS + Q GE L+ F +M L P+ F +SAC+
Sbjct: 474 PDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACS 524
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 38/144 (26%)
Query: 310 LAACAGLASVQHGK-------QIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
L + LAS+Q K I A +++ + D N V + K G +S + +LF
Sbjct: 12 LTSLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFE 71
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFE----------------------------- 393
+M H+N VS N +I+ + G A KLF+
Sbjct: 72 KMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFEL 131
Query: 394 --QMKATGIKPDSVTFIGLLTACN 415
QM+ G +PD VTF+ LL+ CN
Sbjct: 132 FVQMQRCGTEPDYVTFVTLLSGCN 155
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 190/574 (33%), Positives = 325/574 (56%), Gaps = 15/574 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMIL-ARKVFDEM 63
++++ CS + + G ++K G + DV V +++++ K A KVFD+M
Sbjct: 170 TAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKM 229
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
SE N+V+W+ MI+ Q G A+ FF M L +++ +S SACA +++L G+
Sbjct: 230 SELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGK 289
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKV---GYSSDALLVYGEAFEPNLVSFNALIAGFV 177
Q+H+++++ G + V SL+ MY K G D V+ + +++S+ ALI G++
Sbjct: 290 QLHSWAIRSGL--VDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYM 347
Query: 178 EN-QQPEKGFEVFKLMLRQG-LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+N + +F M+ QG + P+ F+F+ + C +D R G + K L SN
Sbjct: 348 KNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASN 407
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
V N++++++ K + + +A++AF + EK+L+S+NTF+ ++E+ + E++
Sbjct: 408 SSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE 467
Query: 296 DH-GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
GV FTFAS+L+ A + S++ G+QIH+ ++++ L+ + V NAL++MY+KCG I
Sbjct: 468 RELGVSA--FTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSI 525
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ ++FN M +RNV+SW ++I A H L+ F QM G+KP+ VT++ +L+AC
Sbjct: 526 DTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSAC 585
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
+H GLV EG +FNSM + + I P +EH+ C++DLL RAG L +A E+ P D +V
Sbjct: 586 SHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLV 645
Query: 475 LGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKD 534
T L ACR+ + +G+ A+++ L P + Y+ LSN+YA G W + R+ +K+
Sbjct: 646 WRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKE 705
Query: 535 SGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
L KE S IEV KF V + +H +I
Sbjct: 706 RNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQI 739
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 231/465 (49%), Gaps = 15/465 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SSLL C + + + G +HA +++ I+PD ++ N +++LY+K G A VF+ M
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 64 S---ERNLVSWSAMISGHHQAGEHLLALEFFS---QMHLLPNEYIFASAISACAGIQSLV 117
+R++VSWSAM++ + G L A++ F ++ L+PN+Y + + I AC+ +
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 118 KGQQIHAYSLKFG-YASISFVGNSLISMYMKVGYS-SDALLVYGEAFEPNLVSFNALIAG 175
G+ + +K G + S VG SLI M++K S +A V+ + E N+V++ +I
Sbjct: 184 VGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITR 243
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
++ P + F M+ G D+F+ + C+ +L G LH ++ L +
Sbjct: 244 CMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD 303
Query: 236 PFVGNTIMALYSKFNLIG---EAEKAFRLIEEKDLISWNTFIAA-CSHCADYEKGLSVFK 291
V +++ +Y+K + G + K F +E+ ++SW I +C + +++F
Sbjct: 304 --VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFS 361
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
EM V P+ FTF+S AC L+ + GKQ+ + L + V N++++M+ K
Sbjct: 362 EMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKS 421
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
+ + + F + +N+VS+NT + + A KL ++ + + TF LL
Sbjct: 422 DRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLL 481
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+ + G +++GE + + K G+S + LI + + G +
Sbjct: 482 SGVANVGSIRKGEQIHSQVVK-LGLSCNQPVCNALISMYSKCGSI 525
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 138/291 (47%), Gaps = 10/291 (3%)
Query: 191 LMLRQGLLP-DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF 249
LM R G+ P D +F+ L+ C + D R G ++H ++ +E + + N++++LYSK
Sbjct: 51 LMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKS 110
Query: 250 NLIGEAEKAF---RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
+AE F R ++D++SW+ +A + + VF E + G+ P+D+ +
Sbjct: 111 GDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFL-ELGLVPNDYCY 169
Query: 307 ASILAACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKC-GLISCSYKLFNEM 364
+++ AC+ V G+ L++ DV VG +L++M+ K +YK+F++M
Sbjct: 170 TAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKM 229
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
NVV+W +I A++ F M +G + D T + +AC + G+
Sbjct: 230 SELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGK 289
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
+S G+ D+E L+D+ + ++ K F +D V+
Sbjct: 290 Q-LHSWAIRSGLVDDVE--CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVM 337
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 77/123 (62%), Gaps = 3/123 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +SLL + ++++G +H+ V+K+G+ + V N ++++Y+KCG + A +VF+
Sbjct: 474 AFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFN 533
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
M RN++SW++MI+G + G + LE F+QM + PNE + + +SAC+ + + +
Sbjct: 534 FMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSE 593
Query: 119 GQQ 121
G +
Sbjct: 594 GWR 596
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 5/181 (2%)
Query: 282 DYEKGLSVFKEMSNDHGVRP-DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV 340
D +S M+ D G+RP D TF+S+L +C + GK +HA LI + D +
Sbjct: 41 DLRGAVSALDLMARD-GIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVL 99
Query: 341 GNALVNMYAKCGLISCSYKLFNEMLH---RNVVSWNTIIAAHANHRLGGSALKLFEQMKA 397
N+L+++Y+K G + + +F M R+VVSW+ ++A + N+ A+K+F +
Sbjct: 100 YNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE 159
Query: 398 TGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLL 457
G+ P+ + ++ AC+++ V G + KT D+ LID+ +
Sbjct: 160 LGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSF 219
Query: 458 E 458
E
Sbjct: 220 E 220
>gi|449523774|ref|XP_004168898.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14850-like [Cucumis sativus]
Length = 606
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 195/577 (33%), Positives = 312/577 (54%), Gaps = 6/577 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQP-DVIVSNHVLNLYAKCGKMILARKVFDE 62
S++S++ ++ G + HA +LK P + NH++N+YAK + A+ + +
Sbjct: 8 SLASVVELAVSVRSSLLGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILEL 67
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
R++V+W+A+I+G Q G + AL FS M + PN++ F + A G++ G
Sbjct: 68 APCRSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTG 127
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+HA ++K G + FVG S+ MY K+G+ +DA V+ E NL ++NA I+ V +
Sbjct: 128 KQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLH 187
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+PE F +LR G PD +F L CS L G LH ++ N V
Sbjct: 188 GRPEDSVIAFIELLRVGGKPDSITFCXFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVS 247
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N ++ Y K + +E F + E++ +SW++ IAA + EK +F + +
Sbjct: 248 NGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKED-I 306
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
P DF +S+L ACAGL+ ++ G+ + A ++ + Q++ V +ALV+MY KCG I + +
Sbjct: 307 EPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQ 366
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTACNHAG 418
FN M RN+VSWN ++ +A+ A+ L E+M A GI P V+ I L+AC+ AG
Sbjct: 367 AFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAG 426
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
+K G F SM++ YG+ P EH+ CL+DLLGRAG + A ++ K+ P + G L
Sbjct: 427 DLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGAL 486
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L ACR+ +G+ A++LF L P + +V+LSN++A+ G W +V R +K+ G+K
Sbjct: 487 LGACRMHGKPELGKLAAEKLFELDPKDSGNHVVLSNMFAATGRWEEVTVVRNEMKEVGIK 546
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
K +S I V F + SH K EI +L L
Sbjct: 547 KGAGFSWITVDSRIHMFQAKDKSHEKDPEIQDILGKL 583
>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 698
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 201/586 (34%), Positives = 325/586 (55%), Gaps = 23/586 (3%)
Query: 5 ISSLLHHCSKTKALQQGISLHAA-VLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SLL C + L++G LHA VL ++NH++ +Y+ C + A ++F M
Sbjct: 23 LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 82
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
RN VSW+ ++SG Q H AL F+ M + P + +SA A A + + + G
Sbjct: 83 PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGA 142
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H ++ G+ + FV ++L MY K G S+A V+ + + + V++ A+I G+ +N
Sbjct: 143 QLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNG 202
Query: 181 QPEKGFEVFKLMLRQGLL-PDRFSFAGGLEICSVSNDLRKGMI---LHCLTVKCKLESNP 236
E F+ M R+GL+ D+ F + S S L+ G + +HC K E
Sbjct: 203 SLEAAVLSFRDMKREGLVGADQHVFC---SVLSASGGLKDGWLSKSIHCCVTKAGFELEV 259
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY------EKGLSVF 290
V N ++ +Y+K + A + ++ D WN ++ S Y E+ L ++
Sbjct: 260 AVRNALIDMYAKSMDVESASRVLKI----DPGGWNV-VSGTSMIDGYIETDCVEEALVIY 314
Query: 291 KEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
E+ GV P++FTF+S++ CA A ++ G Q+HA +I+ L +D VG+ LV+MY K
Sbjct: 315 VELRR-QGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGK 373
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGL 410
CGLIS S +LFNE+ +R ++WN +I A H G A++ F++M +GI+P+ + F+ L
Sbjct: 374 CGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSL 433
Query: 411 LTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQ 470
LTAC+HAGLV EG YF SM++ +GI P EH++C+ID GRAG+L EA ++ + P+
Sbjct: 434 LTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKP 493
Query: 471 DPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARK 530
+ +LL ACR+R +GE A+ L L+P T +V LS +YAS G W DV RK
Sbjct: 494 NAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRK 553
Query: 531 MLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
+++DS +KK P +S ++ F ++SH + +I L+ L+
Sbjct: 554 LMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELT 599
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS++ C+ L+QG LHA V+K + D V + ++++Y KCG + L+ ++F+E+
Sbjct: 328 TFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEI 387
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
R ++W+A+I+ Q G A++ F +M + PN F S ++AC+
Sbjct: 388 EYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACS 438
>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 700
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 190/578 (32%), Positives = 315/578 (54%), Gaps = 6/578 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++S L CS + L+ G +H + K I D+ V + ++ LY+KCG+M A KVF E
Sbjct: 107 TVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEY 166
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISACAGIQSLVKG 119
++++V W+++I+G+ Q G LAL FFS+M +L P+ SA SACA + G
Sbjct: 167 PKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLG 226
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ +H + + G+ + + NS++++Y K G A ++ E +++S+++++A + +N
Sbjct: 227 RSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADN 286
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+F M+ + + +R + L C+ S++L +G +H L V E + V
Sbjct: 287 GAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVS 346
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+M +Y K A F + +KD++SW + + K L VF M + +G
Sbjct: 347 TALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLS-YGT 405
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
RPD ILAA + L VQ +HA + + + + +G +L+ +YAKC I + K
Sbjct: 406 RPDAIALVKILAASSELGIVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANK 465
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA-TGIKPDSVTFIGLLTACNHAG 418
+F M ++VV+W++IIAA+ H G ALKLF QM + +KP+ VTF+ +L+AC+HAG
Sbjct: 466 VFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAG 525
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
L++EG F+ M Y + P+ EH+ ++DLLGR G+L +A + + P+ P V G L
Sbjct: 526 LIEEGIKMFHVMVNEYQLMPNTEHYGIMVDLLGRMGELDKALDMINEMPMQAGPHVWGAL 585
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L ACR+ +++ IGE A LF L P Y LLSN+Y D W D A R ++K++ K
Sbjct: 586 LGACRIHQNIKIGELAALNLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRFK 645
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
K SM+E++ F ++ H + +I ML+ L
Sbjct: 646 KIVGQSMVEIKNEVHSFIASDRFHGESDQIYGMLRKLD 683
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 213/423 (50%), Gaps = 11/423 (2%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C ++ Q LH+ LK+G+ D V + LYA+ + A K+F+E +
Sbjct: 10 LLETCCSKISIPQ---LHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKT 66
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHL------LPNEYIFASAISACAGIQSLVKGQQ 121
+ W+A++ + G+ + L F QM+ P+ Y + A+ +C+G+Q L G+
Sbjct: 67 VYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKM 126
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
IH + K + FVG++LI +Y K G +DA+ V+ E + ++V + ++I G+ +N
Sbjct: 127 IHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGS 186
Query: 182 PEKGFEVF-KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
PE F ++++ + + PD + C+ +D G +H + ++ + N
Sbjct: 187 PELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLAN 246
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+I+ LY K I A FR + KD+ISW++ +A + L++F EM D +
Sbjct: 247 SILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMI-DKRIE 305
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ T S L ACA ++++ GK IH + D+ V AL++MY KC + L
Sbjct: 306 LNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDL 365
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN M ++VVSW + + +A + +L +F M + G +PD++ + +L A + G+V
Sbjct: 366 FNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIV 425
Query: 421 KEG 423
++
Sbjct: 426 QQA 428
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 165/332 (49%), Gaps = 4/332 (1%)
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H+ LK G A SFV L +Y + A ++ E + +NAL+ +
Sbjct: 22 QLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEG 81
Query: 181 QPEKGFEVFKLMLRQGLL---PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ + +F M + PD ++ + L+ CS L G ++H K K++++ F
Sbjct: 82 KWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMF 141
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
VG+ ++ LYSK + +A K F ++D++ W + I E L+ F M
Sbjct: 142 VGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLE 201
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
V PD T S +ACA L+ G+ +H + R + + + N+++N+Y K G I +
Sbjct: 202 QVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSA 261
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
LF EM +++++SW++++A +A++ +AL LF +M I+ + VT I L AC +
Sbjct: 262 ANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASS 321
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
++EG+ + + + YG DI T L+D+
Sbjct: 322 SNLEEGK-HIHKLAVNYGFELDITVSTALMDM 352
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 8/116 (6%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++ +L S+ +QQ + LHA V K G + + ++ LYAKC + A KVF
Sbjct: 409 AIALVKILAASSELGIVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFK 468
Query: 62 EMSERNLVSWSAMIS--GHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACA 111
M +++V+WS++I+ G H GE AL+ F QM + PN+ F S +SAC+
Sbjct: 469 GMRRKDVVTWSSIIAAYGFHGQGEE--ALKLFYQMSNHSDVKPNDVTFVSILSACS 522
>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Cucumis sativus]
Length = 746
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 178/567 (31%), Positives = 319/567 (56%), Gaps = 11/567 (1%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
CS++ L G +H +L G+ V+++N ++++Y+KCG++ AR +FD + + VSW
Sbjct: 77 CSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSW 136
Query: 72 SAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK--GQQIHAYS 126
+++I+G+ Q G++ L +MH L N Y SA+ AC+ + K G +H ++
Sbjct: 137 NSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHA 196
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE--- 183
+K G VG +L+ MY K G DA+ ++ + + N+V +NA++AG ++ + E
Sbjct: 197 IKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKC 256
Query: 184 --KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
K +F M G+ P F+++ L+ C + D + +H L K L S+ ++G+
Sbjct: 257 AYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSI 316
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ LYS + +A F I ++ I ++E LS+F E+ + +P
Sbjct: 317 LIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLT-YEEKP 375
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D+F F++I+++CA + ++ G+QI H ++ +++ N+ + MYAK G + + F
Sbjct: 376 DEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTF 435
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+M + ++VSW+T+I ++A H AL+ FE MK+ GI+P+ F+G+L AC+H GLV+
Sbjct: 436 QQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVE 495
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
EG YF++MEK Y + ++H C++DLLGRAG+L +AE + +P++ LLSA
Sbjct: 496 EGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSA 555
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
CR+ +D V +R+A+++ L+P ++ YVLL N+Y G + R ++++ +KKEP
Sbjct: 556 CRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRIKKEP 615
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEI 568
S I++ F + SH G+I
Sbjct: 616 GLSWIQIGDKVYSFVSGDRSHKNSGQI 642
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 206/386 (53%), Gaps = 11/386 (2%)
Query: 49 KCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFAS 105
KCG A K+FD+MS+ N+V+++++ISG+ Q + F + L ++Y A
Sbjct: 13 KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72
Query: 106 AISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPN 165
A++AC+ +L G+ IH L +G S + NSLI MY K G A +++ + + +
Sbjct: 73 ALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLD 132
Query: 166 LVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRK--GMIL 223
VS+N+LIAG+V+N + E+ + + M + GL + ++ L+ CS + + K G +L
Sbjct: 133 GVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTML 192
Query: 224 HCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY 283
H +K L + VG ++ +Y+K + +A + F + +K+++ +N +A
Sbjct: 193 HDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETI 252
Query: 284 E-----KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
E K L++F EM + G++P FT++S+L AC + + KQ+HA + + L D
Sbjct: 253 EDKCAYKALNLFFEMKS-CGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDE 311
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
+G+ L+++Y+ G + + FN + + +V +I + + SAL LF ++
Sbjct: 312 YIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTY 371
Query: 399 GIKPDSVTFIGLLTACNHAGLVKEGE 424
KPD F ++++C + G+++ GE
Sbjct: 372 EEKPDEFIFSTIMSSCANMGMLRSGE 397
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 168/320 (52%), Gaps = 9/320 (2%)
Query: 147 KVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAG 206
K G + A ++ + + N+V++N+LI+G+V+ +K +F R GL D+++ AG
Sbjct: 13 KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72
Query: 207 GLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKD 266
L CS S +L G ++H L + L S + N+++ +YSK + A F ++ D
Sbjct: 73 ALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLD 132
Query: 267 LISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG--LASVQHGKQ 324
+SWN+ IA YE+ L++ ++M + +G+ + +T S L AC+ G
Sbjct: 133 GVSWNSLIAGYVQNGKYEELLTILQKM-HQNGLAFNTYTLGSALKACSSNFNGCKMFGTM 191
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA-----H 379
+H H I++ L+ DV VG AL++MYAK G + + ++F++M+ +NVV +N ++A
Sbjct: 192 LHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQET 251
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
+ AL LF +MK+ GIKP T+ LL AC K + M K G+ D
Sbjct: 252 IEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKN-GLLSD 310
Query: 440 IEHFTCLIDLLGRAGKLLEA 459
+ LIDL G +++A
Sbjct: 311 EYIGSILIDLYSVLGSMMDA 330
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 137/279 (49%), Gaps = 5/279 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SSLL C + + +HA + K G+ D + + +++LY+ G M+ A F+ +
Sbjct: 278 TYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSI 337
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
+V +AMI G+ Q GE AL F ++ P+E+IF++ +S+CA + L G+
Sbjct: 338 HNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGE 397
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QI ++ K G + + NS I MY K G A L + + P++VS++ +I ++
Sbjct: 398 QIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHG 457
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVG 239
+ F+LM G+ P+ F+F G L CS + +G+ + K++ +
Sbjct: 458 HAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHC 517
Query: 240 NTIMALYSKFNLIGEAEK-AFRLIEEKDLISWNTFIAAC 277
++ L + + +AE RL E + + W ++AC
Sbjct: 518 VCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSAC 556
>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 974
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 203/550 (36%), Positives = 311/550 (56%), Gaps = 8/550 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+ C+ L G LH ++K ++ V+N ++++YAK G + ARK F+ M
Sbjct: 412 TFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELM 471
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ VSW+A+I G+ Q + A F +M +LP+E AS +SACA +Q L +GQ
Sbjct: 472 KIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQ 531
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q H +K G + + G+SLI MY+K G A V+ N+VS NALIAG+
Sbjct: 532 QCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMGH 591
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK-LESNPFVG 239
E+ +F+ + GL P +FAG L+ C + L G +H +K L S+ V
Sbjct: 592 L-EEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVC 650
Query: 240 NTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
+++ LY ++E F ++ K L+ W I+ + +EK L ++ M +D+
Sbjct: 651 VSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDN- 709
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ PD FAS+L ACAG++S+Q+G++IH+ + N D ++L++MYAKCG + S
Sbjct: 710 ILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSL 769
Query: 359 KLFNEMLHRN-VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++F EM RN V+SWN++I A + AL++F+QM+ I PD VTF+G+L+AC+HA
Sbjct: 770 QVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHA 829
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
G V EG F+ M Y + P ++H C++D+LGR G L EAEE+ K DP++ T
Sbjct: 830 GRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWST 889
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL ACR D V G+R A +L L+P ++S YVLLS++YA W R+ +K G+
Sbjct: 890 LLGACRKHGDEVRGKRAADKLMELKPQSSSSYVLLSSIYAESENWSGAVSLRREMKLKGV 949
Query: 538 KKEPSYSMIE 547
KK P YS IE
Sbjct: 950 KKLPGYSWIE 959
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 134/398 (33%), Positives = 216/398 (54%), Gaps = 5/398 (1%)
Query: 30 KMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALE 89
++G PD I V+N Y G++ ARK+F ++ N+V+W+ MISGH + G A+
Sbjct: 236 RVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAIS 295
Query: 90 FFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYM 146
FF ++ L S +SA A + L G +HA + K G +VG++L++MY
Sbjct: 296 FFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYA 355
Query: 147 KVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAG 206
K A V+ E N+V +NA++ GF +N ++ E F M R G PD F+F
Sbjct: 356 KCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTS 415
Query: 207 GLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKD 266
C+ + L G LH + +K K SN FV N ++ +Y+K + EA K F L++ D
Sbjct: 416 IFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHD 475
Query: 267 LISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
+SWN I ++ +F+ M ++ GV PD+ + ASI++ACA + ++ G+Q H
Sbjct: 476 NVSWNAIIVGYVQEEYNDEAFFMFRRMVSN-GVLPDEVSLASIVSACANVQELKRGQQCH 534
Query: 327 AHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGG 386
L+++ L+ G++L++MY KCG++ + +F M RNVVS N +IA + L
Sbjct: 535 CLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMGHL-E 593
Query: 387 SALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
A+ LF++++ G+KP VTF GLL C+ A ++ G
Sbjct: 594 EAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGR 631
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 141/481 (29%), Positives = 252/481 (52%), Gaps = 8/481 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+ S+L + L G +HA K G+ +V V + ++N+YAKC KM A++VF+ +
Sbjct: 311 SLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSL 370
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
ERN+V W+AM+ G Q G +EFFS M P+E+ F S SACA + L G
Sbjct: 371 GERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGG 430
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H +K +AS FV N+L+ MY K G +A + + VS+NA+I G+V+ +
Sbjct: 431 QLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEE 490
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
++ F +F+ M+ G+LPD S A + C+ +L++G HCL VK L+++ G+
Sbjct: 491 YNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGS 550
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +Y K ++ A F + ++++S N IA + E+ + +F+E+ G++
Sbjct: 551 SLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTM-GHLEEAIHLFQEIQM-VGLK 608
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCSYK 359
P + TFA +L C G + G+QIH +++ L+ V +L+ +Y S
Sbjct: 609 PTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSET 668
Query: 360 LFNEMLH-RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
LF+E+ + + +V W +I+ +A AL+ ++ M++ I PD F +L AC
Sbjct: 669 LFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMS 728
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
++ G+ + + T G + D + LID+ + G + + + ++ P + I ++
Sbjct: 729 SLQNGQEIHSLIFHT-GFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSM 787
Query: 479 L 479
+
Sbjct: 788 I 788
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 130/456 (28%), Positives = 222/456 (48%), Gaps = 43/456 (9%)
Query: 16 KALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMI 75
+AL +H+ LK+G+ ++ N +++LY KCG + A+K F + ++++ +W++++
Sbjct: 55 QALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVL 114
Query: 76 SGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYA 132
S + G ++ F M + PNE+ FA +SAC+G+Q + G+Q+H K G+
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFG 174
Query: 133 SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM 192
SF LI MY K Y DA LV+ A + VS+ ALIAG+V + P + +VF M
Sbjct: 175 FRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRM 234
Query: 193 LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI 252
R G PD+ + T++ Y +
Sbjct: 235 QRVGHAPDQITLV-----------------------------------TVVNAYVALGRL 259
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
+A K F I ++++WN I+ + E+ +S F E+ G++ + S+L+A
Sbjct: 260 ADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKT-GLKATRSSLGSVLSA 318
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
A L+ + +G +HA + L+ +V VG+ALVNMYAKC + + ++FN + RN+V W
Sbjct: 319 IASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLW 378
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
N ++ A + L ++ F MK G +PD TF + +AC + G M K
Sbjct: 379 NAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIK 438
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
+ ++ L+D+ ++G L EA K+F L
Sbjct: 439 N-KFASNLFVANALVDMYAKSGALKEAR---KQFEL 470
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 219/464 (47%), Gaps = 34/464 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + +L CS + + G +H V K G ++++YAKC + AR VFD
Sbjct: 144 TFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGA 203
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
+ VSW+A+I+G+ + G + A++ F +M
Sbjct: 204 LNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQ---------------------------- 235
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ G+A ++++ Y+ +G +DA ++ + PN+V++N +I+G + E
Sbjct: 236 ----RVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAE 291
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ F + + GL R S L + + L G ++H K L+ N +VG+ ++
Sbjct: 292 EAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALV 351
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K + + A++ F + E++++ WN + + ++ + F M HG +PD+
Sbjct: 352 NMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKR-HGPQPDE 410
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
FTF SI +ACA L + G Q+H +I+ + ++ V NALV+MYAK G + + K F
Sbjct: 411 FTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFEL 470
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M + VSWN II + A +F +M + G+ PD V+ +++AC + +K G
Sbjct: 471 MKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRG 530
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+ + K G+ + LID+ + G +L A + P
Sbjct: 531 QQCHCLLVKV-GLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMP 573
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 133/268 (49%), Gaps = 9/268 (3%)
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
L ++H ++K + +GN I+ LY K + A+KAF +E+KD+ +WN+ ++
Sbjct: 57 LSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSM 116
Query: 277 CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
+ + F M N H VRP++FTFA +L+AC+GL V G+Q+H + +
Sbjct: 117 YLDHGLFATVVQSFVCMWN-HEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGF 175
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
L++MYAKC + + +F+ L+ + VSW +IA + A+K+F++M+
Sbjct: 176 RSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQ 235
Query: 397 ATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
G PD +T + ++ A G + + F + +P++ + +I + G
Sbjct: 236 RVGHAPDQITLVTVVNAYVALGRLADARKLFTQIP-----NPNVVAWNVMISGHAKRGFA 290
Query: 457 LEAEEY---TKKFPLGQDPIVLGTLLSA 481
EA + KK L LG++LSA
Sbjct: 291 EEAISFFLELKKTGLKATRSSLGSVLSA 318
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 150/363 (41%), Gaps = 39/363 (10%)
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
+Q+L + IH+ SLK G +GN ++ +Y+K G A + + ++ ++N++
Sbjct: 54 LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113
Query: 173 IAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
++ ++++ + F M + P+ F+FA L CS D+ G +HC K
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGF 173
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
F ++ +Y+K + +A F D +SW IA + + VF
Sbjct: 174 GFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDR 233
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
M G PD T ++ VN Y G
Sbjct: 234 MQR-VGHAPDQITLVTV-----------------------------------VNAYVALG 257
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
++ + KLF ++ + NVV+WN +I+ HA A+ F ++K TG+K + +L+
Sbjct: 258 RLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLS 317
Query: 413 ACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDP 472
A ++ G K G+ ++ + L+++ + K+ A++ LG+
Sbjct: 318 AIASLSMLNYGSMVHAQATKE-GLDDNVYVGSALVNMYAKCSKMDAAKQVFNS--LGERN 374
Query: 473 IVL 475
IVL
Sbjct: 375 IVL 377
>gi|147784524|emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]
Length = 763
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 185/489 (37%), Positives = 278/489 (56%), Gaps = 14/489 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S++ CS + G LHA VLK +I N ++++Y K +I A VF M
Sbjct: 166 TFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNVIIDALDVFSRM 225
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKG 119
+ R+L+SW +MI+G Q G L AL +F +M LPNE+IF S SAC+ + G
Sbjct: 226 ATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYG 285
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+H S+KFG F G SL MY K G S A +V+ + P+LV++NA+IAGF
Sbjct: 286 RQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYG 345
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
++ F M QGL+PD + L C+ ++L +GM +H K L+ + V
Sbjct: 346 GDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVC 405
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEE----KDLISWNTFIAACSHCADYEKGLSVFKEMS- 294
NT++ +Y+K E A EE DL+SWN + AC H E+ + K M
Sbjct: 406 NTLLTMYAK---CSELRDAIFFFEEMRCNADLVSWNAILTACMHHDQAEEVFGLLKLMCI 462
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
+ H RPD T ++L A A S++ G Q+H + ++ LN D+ V N L+++YAKCG +
Sbjct: 463 SQH--RPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDISVTNGLIDLYAKCGSL 520
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ K+F+ +++ +VVSW+++I +A G ALKLF+ M+ +KP+ VTF+G+LTAC
Sbjct: 521 KTARKIFDSVINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTAC 580
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
+H GLV+EG + +MEK +GI P EH +C++DLL RAG L EAE + + D +V
Sbjct: 581 SHVGLVEEGWQLYGTMEKEFGIVPTREHCSCMVDLLARAGCLNEAEAFIHQMAFDPDIVV 640
Query: 475 LGTLLSACR 483
TLL+AC+
Sbjct: 641 WKTLLAACK 649
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 156/459 (33%), Positives = 248/459 (54%), Gaps = 7/459 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
L+ CS ++L+ G +H +LK PD+ + NH+LN+Y KCG + A+KVFD M ERN
Sbjct: 69 LISACSYLRSLEHGRKIHDHMLKSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAMPERN 128
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
+VSW+++I+G+ Q G+ ALEF+ QM ++P+++ F S I AC+ + + G+Q+HA
Sbjct: 129 VVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHA 188
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ LK + + N+LISMY K DAL V+ +L+S+ ++IAGF + +
Sbjct: 189 HVLKSEFGAHIIAQNALISMYTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLGYELE 248
Query: 185 GFEVFKLMLRQGL-LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
FK ML QG+ LP+ F F CS G LH +++K L + F G ++
Sbjct: 249 ALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLC 308
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K L+ A F I DL++WN IA ++ D ++ ++ F +M + G+ PD+
Sbjct: 309 DMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRH-QGLIPDE 367
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T S+L AC + + G Q+H ++ +M L+ DV V N L+ MYAKC + + F E
Sbjct: 368 ITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEE 427
Query: 364 M-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
M + ++VSWN I+ A +H L + M + +PD +T +L A ++
Sbjct: 428 MRCNADLVSWNAILTACMHHDQAEEVFGLLKLMCISQHRPDYITLTNVLGASAETVSIEI 487
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
G KT G++ DI LIDL + G L A +
Sbjct: 488 GNQVHCYALKT-GLNCDISVTNGLIDLYAKCGSLKTARK 525
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/383 (31%), Positives = 205/383 (53%), Gaps = 7/383 (1%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+A ISAC+ ++SL G++IH + LK + N +++MY K G DA V+
Sbjct: 66 YAYLISACSYLRSLEHGRKIHDHMLKSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAMP 125
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
E N+VS+ ++IAG+ +N Q E + ML+ G++PD+F+F ++ CS D+ G
Sbjct: 126 ERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQ 185
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
LH +K + ++ N ++++Y+K N+I +A F + +DLISW + IA S
Sbjct: 186 LHAHVLKSEFGAHIIAQNALISMYTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLGY 245
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
+ L FKEM + P++F F S+ +AC+ L ++G+Q+H I+ L +DV G
Sbjct: 246 ELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGC 305
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
+L +MYAKCGL+SC+ +F ++ ++V+WN IIA A A+ F QM+ G+ P
Sbjct: 306 SLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIP 365
Query: 403 DSVTFIGLLTACNHAGLVKEG---EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
D +T LL AC + +G Y N M G+ D+ L+ + + +L +A
Sbjct: 366 DEITVRSLLCACTSPSELYQGMQVHGYINKM----GLDLDVPVCNTLLTMYAKCSELRDA 421
Query: 460 EEYTKKFPLGQDPIVLGTLLSAC 482
+ ++ D + +L+AC
Sbjct: 422 IFFFEEMRCNADLVSWNAILTAC 444
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 132/274 (48%), Gaps = 5/274 (1%)
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
K FE L + G ++A + CS L G +H +K K + + N I+
Sbjct: 48 KAFEF--LQKKTGFCLTLSTYAYLISACSYLRSLEHGRKIHDHMLKSKSHPDLTLQNHIL 105
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y K + +A+K F + E++++SW + IA S L + +M GV PD
Sbjct: 106 NMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQS-GVMPDQ 164
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
FTF SI+ AC+ L + G+Q+HAH+++ + NAL++MY K +I + +F+
Sbjct: 165 FTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNVIIDALDVFSR 224
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK-PDSVTFIGLLTACNHAGLVKE 422
M R+++SW ++IA + AL F++M G+ P+ F + +AC+ L E
Sbjct: 225 MATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSL-LQPE 283
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+ M +G+ D+ L D+ + G L
Sbjct: 284 YGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLL 317
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 92/156 (58%)
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
S N +I + + + F+ + G T+A +++AC+ L S++HG++IH H
Sbjct: 29 SSNEYITTLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGRKIHDH 88
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
+++ + + D+ + N ++NMY KCG + + K+F+ M RNVVSW ++IA ++ + GG+A
Sbjct: 89 MLKSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNA 148
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
L+ + QM +G+ PD TF ++ AC+ G + G
Sbjct: 149 LEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGR 184
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 192/570 (33%), Positives = 320/570 (56%), Gaps = 18/570 (3%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
++Q ++H V + G++ ++VS + + YA+ G + A++VFD +ER++VSW+AM+
Sbjct: 241 IRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGA 300
Query: 78 HHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
+ Q G A F++M + P++ +A + C+ SL G+ IH +L+ G
Sbjct: 301 YAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCS---SLRFGRMIHGCALEKGLDRD 357
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
+GN+L+ MY + G +A ++ + N VS+N +IAG + Q ++ E+F+ M
Sbjct: 358 IVLGNALLDMYTRCGSPEEARHLF-KRIPCNAVSWNTMIAGSSQKGQMKRAVELFQRMQL 416
Query: 195 QGLLPDRFSFAGGLE-ICSVSNDLR---KGMILHCLTVKCKLESNPFVGNTIMALYSKFN 250
+G+ P R ++ LE + S + R +G LH V C S P +G ++ +Y+
Sbjct: 417 EGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCG 476
Query: 251 LIGEAEKAFR---LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFA 307
I EA +F+ + + D++SWN I++ S ++ L F+ M + HGV P+ T
Sbjct: 477 AIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRM-DLHGVAPNQITCV 535
Query: 308 SILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM-LH 366
++L ACAG A++ G+ +H HL + ++ V AL +MY +CG + + ++F ++ +
Sbjct: 536 AVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVE 595
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
R+VV +N +IAA++ + L G ALKLF +M+ G +PD +F+ +L+AC+H GL EG
Sbjct: 596 RDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEI 655
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRR 486
F SM ++YGI+P +H+ C +D+LGRAG L +AEE + + +V TLL ACR R
Sbjct: 656 FRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYR 715
Query: 487 DVVIGERLAKQLFH-LQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSM 545
DV G RLA + L P S YV+LSN+ A G W + A R ++ GL+KE S
Sbjct: 716 DVDRG-RLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSW 774
Query: 546 IEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
IE++ +F + SH + EI L+ L
Sbjct: 775 IEIKSRVHEFVAGDRSHPRSEEIYRELERL 804
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 144/512 (28%), Positives = 265/512 (51%), Gaps = 23/512 (4%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
++L C++ L QG S+HA +++ G++ +++N +L++Y CG + A +F++M ER
Sbjct: 133 AVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ER 191
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIH 123
+LVSW+A I+ + Q+G+ +ALE F +M L P A++ CA I+ + Q IH
Sbjct: 192 DLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATIR---QAQAIH 248
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ G V +L S Y ++G+ A V+ A E ++VS+NA++ + ++
Sbjct: 249 FIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMS 308
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ +F ML +G+ P + + CS LR G ++H ++ L+ + +GN ++
Sbjct: 309 EAALLFARMLHEGISPSKVTLVNASTGCS---SLRFGRMIHGCALEKGLDRDIVLGNALL 365
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y++ EA F+ I + +SWNT IA S ++ + +F+ M + G+ P
Sbjct: 366 DMYTRCGSPEEARHLFKRI-PCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLE-GMAPVR 423
Query: 304 FTFASILAACAG----LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
T+ ++L A A ++ G+++H+ ++ + +G A+V MYA CG I +
Sbjct: 424 ATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAA 483
Query: 360 LFNE--MLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
F M R +VVSWN II++ + H G AL F +M G+ P+ +T + +L AC
Sbjct: 484 SFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAG 543
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
A + EGE + + + G+ ++ T L + GR G L A E +K + +D ++
Sbjct: 544 AAALTEGEIVHDHLRHS-GMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFN 602
Query: 477 TLLSACRLRRDVVIGERLAKQLFHLQPTTTSP 508
+++A ++ + GE L K + +Q + P
Sbjct: 603 AMIAA--YSQNGLAGEAL-KLFWRMQQEGSRP 631
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 212/409 (51%), Gaps = 14/409 (3%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL + L QG +HA ++ +G++ ++ NH+L LY KC + +VF + R+
Sbjct: 35 LLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRD 92
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
SW+ +I+ + + G+ A+ F +M + + F + + ACA + L +G+ IHA
Sbjct: 93 EASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHA 152
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ ++ G S + N L+ +Y G + A+L++ E E +LVS+NA IA ++
Sbjct: 153 WIVESGLKGKSVLANLLLHIYGSCGCVASAMLLF-EKMERDLVSWNAAIAANAQSGDLGI 211
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
E+F+ M +G+ P R + L +C+ +R+ +H + + LE V + +
Sbjct: 212 ALELFQRMQLEGVRPARITLVIALTVCAT---IRQAQAIHFIVRESGLEQTLVVSTALAS 268
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
Y++ + +A++ F E+D++SWN + A + + +F M ++ G+ P
Sbjct: 269 AYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHE-GISPSKV 327
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T + A G +S++ G+ IH + L++D+ +GNAL++MY +CG + LF +
Sbjct: 328 TLVN---ASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRI 384
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
N VSWNT+IA + A++LF++M+ G+ P T++ LL A
Sbjct: 385 PC-NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEA 432
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 202/436 (46%), Gaps = 26/436 (5%)
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
L +G++IHA + G +GN L+ +Y+K D V+ + S+ +I
Sbjct: 45 LSQGRRIHARIVSLGLEE--ELGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITA 102
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+ E+ Q ++ +F M ++G+ D +F L+ C+ DL +G +H V+ L+
Sbjct: 103 YTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGK 162
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
+ N ++ +Y + A F +E +DL+SWN IAA + D L +F+ M
Sbjct: 163 SVLANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIAANAQSGDLGIALELFQRMQL 221
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
+ GVRP T L CA +++ + IH + L Q + V AL + YA+ G +
Sbjct: 222 E-GVRPARITLVIALTVCA---TIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLY 277
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ ++F+ R+VVSWN ++ A+A H A LF +M GI P VT + T C+
Sbjct: 278 QAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCS 337
Query: 416 --HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
G + G A +EK G+ DI L+D+ R G EA K+ P + +
Sbjct: 338 SLRFGRMIHGCA----LEK--GLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPC--NAV 389
Query: 474 VLGTLLSAC----RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGAR 529
T+++ +++R V + +R+ QL + P + LL + ++ +A R
Sbjct: 390 SWNTMIAGSSQKGQMKRAVELFQRM--QLEGMAPVRATYLNLLEAVASNPEEARAMAEGR 447
Query: 530 KM---LKDSGLKKEPS 542
K+ + G EP+
Sbjct: 448 KLHSRIVSCGYASEPA 463
>gi|147836314|emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
Length = 768
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 201/613 (32%), Positives = 314/613 (51%), Gaps = 52/613 (8%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD-- 61
+ SS+L C++ + L+ G +H VLK G + +V + +L YA C ++ AR+VFD
Sbjct: 140 TFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVL 199
Query: 62 -----------------------------EMSERNLVSWSAMISGHHQAGEHL-LALEFF 91
+M R++V+W+ +ISG + G+ ALE F
Sbjct: 200 VRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEMF 259
Query: 92 SQM----HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMK 147
M PNE+ F + AC + L G+ +H +K G +G +L+ Y +
Sbjct: 260 RLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCE 319
Query: 148 VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGG 207
DAL V P L + N+LI G + + E VF M + G
Sbjct: 320 CEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGY 379
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE--- 264
+ + R + C T+ F NT++++YS+ GE +KA L EE
Sbjct: 380 AVGGQMDDSKRLFEKMPCRTI--------FSSNTMISVYSRN---GEIDKALELFEETKN 428
Query: 265 -KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGK 323
KD ++WN+ I+ H E+ L ++ M + ++ TF+++ AC+ L S+Q G+
Sbjct: 429 EKDPVTWNSMISGYIHSGQPEEALKLYITM-HRLSIQQTRSTFSALFHACSCLGSLQQGQ 487
Query: 324 QIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR 383
+HAHLI+ +V VG +L++MY+KCG I + F + NV +W +I HA H
Sbjct: 488 LLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHG 547
Query: 384 LGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF 443
LG A+ LF+ M G+ P+ TF+G+L+AC+ AGLV EG F+SME+ Y ++P +EH+
Sbjct: 548 LGSEAISLFDXMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHY 607
Query: 444 TCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQP 503
C++DLLGR+G + EAEE+ KK PL D +V G LLSAC D+ +GER+A+++F P
Sbjct: 608 ACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDP 667
Query: 504 TTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHS 563
S YV+LSN+YA G W + RK+L+ +KK+P S IE+ F++ + SH
Sbjct: 668 KPISSYVILSNIYAGLGRWREKMMVRKILRGFKVKKDPGCSWIELNNKIHVFSIEDRSHP 727
Query: 564 KIGEINYMLKTLS 576
I L+ L+
Sbjct: 728 YCNMIYATLEHLT 740
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 133/325 (40%), Gaps = 63/325 (19%)
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL 198
N IS Y K A ++ + + +VS+N +I+ + ++ + + + M R +
Sbjct: 76 NIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHRSHMK 135
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKA 258
+F+ L +C+ LR G ++HCL +K ES VG+ ++ Y+ IGEA +
Sbjct: 136 LSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRV 195
Query: 259 FRLI-------------------------------EEKDLISWNTFIAACSHCAD-YEKG 286
F ++ +D+++W T I+ S D K
Sbjct: 196 FDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKA 255
Query: 287 LSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVN 346
L +F+ M P++FTF ++ AC L + G+ +H L++ L D +G ALV
Sbjct: 256 LEMFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVE 315
Query: 347 MYAKC--------------------------GLISC-----SYKLFNEMLHRNVVSWNTI 375
Y +C GLIS + +FN M N VS+N +
Sbjct: 316 FYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLM 375
Query: 376 IAAHANHRLGGSALKLFEQMKATGI 400
I +A + +LFE+M I
Sbjct: 376 IKGYAVGGQMDDSKRLFEKMPCRTI 400
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 110/223 (49%), Gaps = 16/223 (7%)
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N ++ Y+K + + A + F + ++ ++SWNT I++ S + + L + M H +
Sbjct: 76 NIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHRSH-M 134
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+ + TF+S+L+ CA L ++ GK IH +++ VG+AL+ YA C I + +
Sbjct: 135 KLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARR 194
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F+ ++ RN V W+ ++ + + AL +F +M + D V + L++ G
Sbjct: 195 VFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMP----RRDVVAWTTLIS-----GF 245
Query: 420 VKEGEA------YFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
K G+ F M ++ +P+ F C++ GR G L
Sbjct: 246 SKNGDGCGKALEMFRLMMRSGETTPNEFTFDCVVRACGRLGIL 288
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 187/559 (33%), Positives = 311/559 (55%), Gaps = 4/559 (0%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+HA K+G + V + +++ Y+ CG + AR+VFD + ++ V+W+AM+S + +
Sbjct: 553 VHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDC 612
Query: 84 HLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
L+ FS+M + N + S + A + S+V G+ IHA S+K Y + V +
Sbjct: 613 PENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGA 672
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
L+ MY K G DA L + +++ ++ +I+ + + Q E+ FE+F M+R + P+
Sbjct: 673 LLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPN 732
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
FS + L+ C+ L G +H +K ES FVGN ++ LY+K + + + + F
Sbjct: 733 EFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFS 792
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ + + +SWNT I S E LSVF+EM V T++S+L ACA AS+
Sbjct: 793 SLRDVNEVSWNTIIVGYSKSGFGEAALSVFREM-RAASVPSTQVTYSSVLRACASTASIN 851
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
H Q+H + + N D V N+L++ YAKCG I + ++F + ++VSWN II+ +A
Sbjct: 852 HVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYA 911
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
H A +LF+ M IK + +TF+ LL+ C GLV +G + F+SM +GI P +
Sbjct: 912 VHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSM 971
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH 500
EH+TC++ LLGRAG+L +A + P +V LLS+C + ++V +G A+++
Sbjct: 972 EHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLE 1031
Query: 501 LQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEF 560
++P + YVLLSN+Y++ G VA RK +++ G++KEP S +E++G F+V
Sbjct: 1032 IEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVGSE 1091
Query: 561 SHSKIGEINYMLKTLSLAA 579
H + IN ML+ L+L A
Sbjct: 1092 DHPCMRVINAMLEWLNLKA 1110
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 138/469 (29%), Positives = 232/469 (49%), Gaps = 27/469 (5%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMG--IQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
LL C + G ++H V++ G + D+ +N +LN+Y K G A +VFD + E
Sbjct: 434 LLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPE 493
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQI 122
RN+VS+ ++ GH GE A F ++ N+++ + + + +L +
Sbjct: 494 RNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGV 553
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
HA + K G+ +FVG++LI Y G SDA V+ + V++ A+++ + EN P
Sbjct: 554 HACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCP 613
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLE--ICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E ++F M + F+ L +C S L KG +H +VK ++ V
Sbjct: 614 ENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKG--IHACSVKTLYDTERHVYG 671
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y+K I +A AF ++ D+I W+ I+ + C E+ +F M V
Sbjct: 672 ALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRS-SVS 730
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P++F+ +S+L ACA + + GKQIH H I++ ++ VGNAL+++YAKC + S ++
Sbjct: 731 PNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEI 790
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC------ 414
F+ + N VSWNTII ++ G +AL +F +M+A + VT+ +L AC
Sbjct: 791 FSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASI 850
Query: 415 NHAGLVK--EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
NH G V ++ FNS D LID + G + +A E
Sbjct: 851 NHVGQVHCLIEKSTFNS---------DTIVSNSLIDSYAKCGCIRDARE 890
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 209/437 (47%), Gaps = 24/437 (5%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C + L +GI HA +K + V +L++YAKCG + AR F+ ++ +++ W
Sbjct: 644 CLSSVVLGKGI--HACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILW 701
Query: 72 SAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
S MIS + Q ++ A E F +M + PNE+ +S + ACA + L G+QIH +++K
Sbjct: 702 SLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIK 761
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
G+ S FVGN+LI +Y K +L ++ + N VS+N +I G+ ++ E V
Sbjct: 762 IGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSV 821
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
F+ M + + +++ L C+ + + +HCL K S+ V N+++ Y+K
Sbjct: 822 FREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAK 881
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
I +A + F ++E DL+SWN I+ + +F MS + ++ +D TF +
Sbjct: 882 CGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKN-SIKANDITFVA 940
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG----NALVNMYAKCGLISCSYKLFNEM 364
+L+ C V G + MRL+ + +V + + G ++ + ++
Sbjct: 941 LLSVCGSTGLVSQGLSL---FDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDI 997
Query: 365 LH-RNVVSWNTIIAA---HANHRLGGSALKLFEQMKATGIKP-DSVTFIGLLTACNHAGL 419
+ + W ++++ H N LG F K I+P D T++ L + AG
Sbjct: 998 PSAPSAMVWRALLSSCIVHKNVELG-----RFSAEKVLEIEPQDETTYVLLSNMYSAAGS 1052
Query: 420 VKEGEAYFNSMEKTYGI 436
+ + A+F + G+
Sbjct: 1053 LDQ-VAFFRKSMRNIGV 1068
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 167/362 (46%), Gaps = 8/362 (2%)
Query: 99 NEYIFASAISACAGIQSLVKGQQIHAYSLKFG-YASIS-FVGNSLISMYMKVGYSSDALL 156
+ Y +A + C G+ +H + ++ G A + F N L++MY KVG A
Sbjct: 427 DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHR 486
Query: 157 VYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSND 216
V+ E N+VSF L+ G + E+ +F+ + +G ++F L++ +
Sbjct: 487 VFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDT 546
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
L +H K + N FVG+ ++ YS ++ +A + F I KD ++W ++
Sbjct: 547 LGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSC 606
Query: 277 CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
S E L +F +M + + F S+L A L+SV GK IHA ++ +
Sbjct: 607 YSENDCPENTLQIFSKMRVAVS-KLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDT 665
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
+ V AL++MYAKCG I + F + + +V+ W+ +I+ +A A +LF +M
Sbjct: 666 ERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMM 725
Query: 397 ATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFT--CLIDLLGRAG 454
+ + P+ + +L AC + L+ G+ N K I + E F LIDL +
Sbjct: 726 RSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIK---IGHESELFVGNALIDLYAKCS 782
Query: 455 KL 456
+
Sbjct: 783 DM 784
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 119/223 (53%), Gaps = 3/223 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+SS+L C+ L G +H +K+G + ++ V N +++LYAKC M + ++F +
Sbjct: 735 SLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSL 794
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL--LPNEYI-FASAISACAGIQSLVKGQ 120
+ N VSW+ +I G+ ++G AL F +M +P+ + ++S + ACA S+
Sbjct: 795 RDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVG 854
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H K + S + V NSLI Y K G DA ++ E +LVS+NA+I+G+ +
Sbjct: 855 QVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHG 914
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMIL 223
Q E+F +M + + + +F L +C + + +G+ L
Sbjct: 915 QAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSL 957
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 13/217 (5%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
SS+L C+ T ++ +H + K D IVSN +++ YAKCG + AR++F+ + E
Sbjct: 838 SSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKE 897
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQI 122
+LVSW+A+ISG+ G+ +A E F M + N+ F + +S C + +G +
Sbjct: 898 CDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSL 957
Query: 123 -HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGE-AFEPNLVSFNALIAGFVENQ 180
+ L G ++ + + G +DAL G+ P+ + + AL++ + ++
Sbjct: 958 FDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHK 1017
Query: 181 QPEKG-FEVFKLMLRQG-------LLPDRFSFAGGLE 209
E G F K++ + LL + +S AG L+
Sbjct: 1018 NVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLD 1054
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 190/574 (33%), Positives = 325/574 (56%), Gaps = 15/574 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMIL-ARKVFDEM 63
++++ CS + + G ++K G + DV V +++++ K A KVFD+M
Sbjct: 170 TAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKM 229
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
SE N+V+W+ MI+ Q G A+ FF M L +++ +S SACA +++L G+
Sbjct: 230 SELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGK 289
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKV---GYSSDALLVYGEAFEPNLVSFNALIAGFV 177
Q+H+++++ G + V SL+ MY K G D V+ + +++S+ ALI G++
Sbjct: 290 QLHSWAIRSGL--VDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYM 347
Query: 178 EN-QQPEKGFEVFKLMLRQG-LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+N + +F M+ QG + P+ F+F+ + C +D R G + K L SN
Sbjct: 348 KNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASN 407
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
V N++++++ K + + +A++AF + EK+L+S+NTF+ ++E+ + E++
Sbjct: 408 SSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE 467
Query: 296 DH-GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
GV FTFAS+L+ A + S++ G+QIH+ ++++ L+ + V NAL++MY+KCG I
Sbjct: 468 RELGVSA--FTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSI 525
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ ++FN M +RNV+SW ++I A H L+ F QM G+KP+ VT++ +L+AC
Sbjct: 526 DTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSAC 585
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
+H GLV EG +FNSM + + I P +EH+ C++DLL RAG L +A E+ P D +V
Sbjct: 586 SHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLV 645
Query: 475 LGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKD 534
T L ACR+ + +G+ A+++ L P + Y+ LSN+YA G W + R+ +K+
Sbjct: 646 WRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKE 705
Query: 535 SGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
L KE S IEV KF V + +H +I
Sbjct: 706 RNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQI 739
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 232/468 (49%), Gaps = 15/468 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SSLL C + + + G +HA +++ I+PD ++ N +++LY+K G A VF+ M
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 64 S---ERNLVSWSAMISGHHQAGEHLLALEFFS---QMHLLPNEYIFASAISACAGIQSLV 117
+R++VSWSAM++ + G L A++ F ++ L+PN+Y + + I AC+ +
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 118 KGQQIHAYSLKFG-YASISFVGNSLISMYMKVGYS-SDALLVYGEAFEPNLVSFNALIAG 175
G+ + +K G + S VG SLI M++K S +A V+ + E N+V++ +I
Sbjct: 184 VGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITR 243
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
++ P + F M+ G D+F+ + C+ +L G LH ++ L +
Sbjct: 244 CMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD 303
Query: 236 PFVGNTIMALYSKFNLIG---EAEKAFRLIEEKDLISWNTFIAA-CSHCADYEKGLSVFK 291
V +++ +Y+K + G + K F +E+ ++SW I +C + +++F
Sbjct: 304 --VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFS 361
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
EM V P+ FTF+S AC L+ + GKQ+ + L + V N++++M+ K
Sbjct: 362 EMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKS 421
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
+ + + F + +N+VS+NT + + A KL ++ + + TF LL
Sbjct: 422 DRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLL 481
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+ + G +++GE + + K G+S + LI + + G + A
Sbjct: 482 SGVANVGSIRKGEQIHSQVVK-LGLSCNQPVCNALISMYSKCGSIDTA 528
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 138/291 (47%), Gaps = 10/291 (3%)
Query: 191 LMLRQGLLP-DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF 249
LM R G+ P D +F+ L+ C + D R G ++H ++ +E + + N++++LYSK
Sbjct: 51 LMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKS 110
Query: 250 NLIGEAEKAF---RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
+AE F R ++D++SW+ +A + + VF E + G+ P+D+ +
Sbjct: 111 GDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFL-ELGLVPNDYCY 169
Query: 307 ASILAACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKC-GLISCSYKLFNEM 364
+++ AC+ V G+ L++ DV VG +L++M+ K +YK+F++M
Sbjct: 170 TAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKM 229
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
NVV+W +I A++ F M +G + D T + +AC + G+
Sbjct: 230 SELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGK 289
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
+S G+ D+E L+D+ + ++ K F +D V+
Sbjct: 290 Q-LHSWAIRSGLVDDVE--CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVM 337
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 77/123 (62%), Gaps = 3/123 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +SLL + ++++G +H+ V+K+G+ + V N ++++Y+KCG + A +VF+
Sbjct: 474 AFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFN 533
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
M RN++SW++MI+G + G + LE F+QM + PNE + + +SAC+ + + +
Sbjct: 534 FMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSE 593
Query: 119 GQQ 121
G +
Sbjct: 594 GWR 596
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 5/184 (2%)
Query: 279 HCADYEKGLSVFKEMSNDHGVRP-DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD 337
+ D +S M+ D G+RP D TF+S+L +C + GK +HA LI + D
Sbjct: 38 NAGDLRGAVSALDLMARD-GIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPD 96
Query: 338 VGVGNALVNMYAKCGLISCSYKLFNEMLH---RNVVSWNTIIAAHANHRLGGSALKLFEQ 394
+ N+L+++Y+K G + + +F M R+VVSW+ ++A + N+ A+K+F +
Sbjct: 97 SVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVE 156
Query: 395 MKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
G+ P+ + ++ AC+++ V G + KT D+ LID+ +
Sbjct: 157 FLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGE 216
Query: 455 KLLE 458
E
Sbjct: 217 NSFE 220
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 196/565 (34%), Positives = 303/565 (53%), Gaps = 51/565 (9%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAG 112
A VF+ + E NL+ W+ M GH + + + AL+ + M LLPN Y F + +CA
Sbjct: 16 AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMK------------------------- 147
+++ +G QIH + LK GY +V SLISMY++
Sbjct: 76 LKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTAL 135
Query: 148 -VGYSSDALL-----VYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDR 201
GY+S + ++ E ++VS+NA+I+G+VE ++ E+FK M++ + PD
Sbjct: 136 VTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDE 195
Query: 202 FSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKA--- 258
+ + + S + G +H SN + N ++ YSK GE E A
Sbjct: 196 STMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSK---CGEMETACGL 252
Query: 259 FRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
F + KD+ISWN I +H Y++ L +F+EM G P+D T SIL ACA L +
Sbjct: 253 FLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRS-GESPNDVTMLSILHACAHLGA 311
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNA------LVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
+ G+ IH + I RL GV NA L++MY+KCG I ++++FN MLH+++ +W
Sbjct: 312 IDIGRWIHVY-IDKRLK---GVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAW 367
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
N +I A H +A +F +M+ IKPD +TF+GLL+AC+HAG++ G F SM
Sbjct: 368 NAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTH 427
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGE 492
Y I+P +EH+ C+IDLLG +G EAEE + D ++ +LL AC++ +V +GE
Sbjct: 428 NYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGE 487
Query: 493 RLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTF 552
+ A+ LF ++P YVLLSN+YA+ G W +VA R +L D G+KK P S IE+
Sbjct: 488 KFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVV 547
Query: 553 EKFTVAEFSHSKIGEINYMLKTLSL 577
+F + + H + EI ML+ + +
Sbjct: 548 HEFIIGDKFHPRNREIYGMLEEMEV 572
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 125/490 (25%), Positives = 220/490 (44%), Gaps = 76/490 (15%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLY-------------------- 47
LL C+K KA ++G+ +H VLK+G + D+ V ++++Y
Sbjct: 69 LLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRD 128
Query: 48 -----------AKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM-- 94
A G + AR +FDE+ +++VSW+AMISG+ + G + ALE F +M
Sbjct: 129 VVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMK 188
Query: 95 -HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSD 153
++ P+E + ISA A S+ G+Q+H++ G+ S + N+LI Y K G
Sbjct: 189 TNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMET 248
Query: 154 ALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSV 213
A ++ +++S+N LI G+ ++ +F+ MLR G P+ + L C+
Sbjct: 249 ACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAH 308
Query: 214 SNDLRKGMILHC-LTVKCKLESN-PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
+ G +H + + K +N + +++ +YSK I A + F + K L +WN
Sbjct: 309 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWN 368
Query: 272 TFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
I + +F M + ++PDD TF +L+AC+ + G+ H+ R
Sbjct: 369 AMIFGFAMHGRANAAFDIFSRMRKNE-IKPDDITFVGLLSACSHAGMLDLGR----HIFR 423
Query: 332 MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL-K 390
++ +YK+ ++ H + +I LG S L K
Sbjct: 424 S---------------------MTHNYKITPKLEH-----YGCMIDL-----LGHSGLFK 452
Query: 391 LFEQMKAT-GIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
E+M +T ++PD V + LL AC G V+ GE + ++ K +P + L ++
Sbjct: 453 EAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPG--SYVLLSNI 510
Query: 450 LGRAGKLLEA 459
AG+ E
Sbjct: 511 YATAGRWNEV 520
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 200/615 (32%), Positives = 327/615 (53%), Gaps = 48/615 (7%)
Query: 6 SSLLHH-------CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARK 58
SSLLH+ C + L+ G SLHA +K + +SNH L LY+KC ++ AR+
Sbjct: 5 SSLLHNFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARR 64
Query: 59 VFD-------------------------------EMSERNLVSWSAMISGHHQAGEHLLA 87
VFD EM + + VS++ +I+ + + G+ A
Sbjct: 65 VFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPA 124
Query: 88 LEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISM 144
+ F +M L + + + I+AC L++ Q+HA S+ G S VGN+LI+
Sbjct: 125 FQLFLEMREAFLDMDGFTLSGIITACGINVGLIR--QLHALSVVTGLDSYVSVGNALITS 182
Query: 145 YMKVGYSSDALLVYGEAFEP-NLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFS 203
Y K G+ +A ++ E + VS+N+++ ++++++ K E++ M +GL+ D F+
Sbjct: 183 YSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFT 242
Query: 204 FAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN-LIGEAEKAFRLI 262
A L + DL G+ H +K N VG+ ++ LYSK + + K F I
Sbjct: 243 LASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEI 302
Query: 263 EEKDLISWNTFIAACSHCADY-EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQH 321
DL+ WNT I+ S D ++ L F+++ G RPDD + +++AC+ ++S
Sbjct: 303 SNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVV-GHRPDDCSLVCVISACSNMSSPSQ 361
Query: 322 GKQIHAHLIRMRLNQD-VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G+Q+H +++ + + + V NAL+ MY+KCG + + LF+ M N VS+N++IA +A
Sbjct: 362 GRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYA 421
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
H +G +L LF++M G P ++TFI +L AC H G V++G+ YFN M++ +GI P+
Sbjct: 422 QHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEA 481
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH 500
HF+C+IDLLGRAGKL EAE + P LL ACR+ +V + + A +L
Sbjct: 482 GHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQ 541
Query: 501 LQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEF 560
L P +PYV+L+N+Y+ +G D A RK+++D G+KK+P S IEV F +
Sbjct: 542 LDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDT 601
Query: 561 SHSKIGEINYMLKTL 575
H I +I L+ +
Sbjct: 602 FHPMIKKIQEYLEEM 616
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 147/284 (51%), Gaps = 12/284 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGK-MILARKVFDE 62
+++S+L + + L G+ HA ++K G + V + +++LY+KCG M+ RKVFDE
Sbjct: 242 TLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDE 301
Query: 63 MSERNLVSWSAMISGHHQAGEHLL--ALEFFSQMHLL---PNEYIFASAISACAGIQSLV 117
+S +LV W+ MISG + E L ALE F Q+ ++ P++ ISAC+ + S
Sbjct: 302 ISNPDLVLWNTMISG-YSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPS 360
Query: 118 KGQQIHAYSLKFGYASISF-VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
+G+Q+H +LK S V N+LI+MY K G DA ++ E N VS+N++IAG+
Sbjct: 361 QGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGY 420
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
++ + +F+ ML G P +F L C+ + + G I + +K K P
Sbjct: 421 AQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNM-MKQKFGIEP 479
Query: 237 FVG--NTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAAC 277
G + ++ L + + EAE+ I + W+ + AC
Sbjct: 480 EAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGAC 523
>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 768
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 194/582 (33%), Positives = 315/582 (54%), Gaps = 15/582 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S + C++ L G +HA +K +IV N ++ +Y+K G + +F+ +
Sbjct: 148 ALGSAVRACAELGDLGLGRQVHAQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERI 207
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM------HLLPNEYIFASAISACAG-IQSL 116
+++L SW ++I+G Q G + AL F +M H PNE+ F S AC+ I SL
Sbjct: 208 RDKDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMHH--PNEFHFGSVFRACSVVINSL 265
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G+QIH +K+ S+ G SL MY + A+ V+ P+LVS+N+LI F
Sbjct: 266 EYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAF 325
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
+ + +F M L PD + L C + LR+G +H VK L +
Sbjct: 326 SADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDV 385
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
V N+++++Y++ A F ++D+++WN+ + AC E +F+ +
Sbjct: 386 MVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDVFKLFRLL--- 442
Query: 297 HGVRP--DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
H P D + ++L+A A L + KQ+HA+ ++ L D + NAL++ YAKCG +
Sbjct: 443 HSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSL 502
Query: 355 SCSYKLFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ KLF M R+V SW+++I +A AL LF +M+ G+KP+ VTF+G+L A
Sbjct: 503 DDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIA 562
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C+ GLV EG Y++ ME YGI P EH +C+IDLL RAG+L EA ++ + P D I
Sbjct: 563 CSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDII 622
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
+ TLL+A R DV +G+R A+ + ++ P+ ++ YVLL N+YAS G W + A +K ++
Sbjct: 623 MWNTLLAASRTHNDVEMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWNEFARLKKDMR 682
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
SG++K P S I+++G + F V + SH + E+ ML +
Sbjct: 683 SSGVQKSPGKSWIKLKGELKVFIVEDRSHPESDEMYTMLDLI 724
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 148/481 (30%), Positives = 247/481 (51%), Gaps = 18/481 (3%)
Query: 12 CSKTKALQQGISLHAAVLKMG-----IQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
CS+ ++ QG +H +L + + I+SNH++ +Y +C AR VFD M +R
Sbjct: 50 CSRLRSFPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDR 109
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIH 123
N VSW+A+I+ H Q A+ FS M L P+E+ SA+ ACA + L G+Q+H
Sbjct: 110 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVH 169
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A ++K V N+L++MY K G D ++ + +L S+ ++IAG + +
Sbjct: 170 AQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREM 229
Query: 184 KGFEVFKLMLRQGL-LPDRFSFAGGLEICSVS-NDLRKGMILHCLTVKCKLESNPFVGNT 241
+F+ M+ +G+ P+ F F CSV N L G +H L VK KL+ N + G +
Sbjct: 230 DALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCS 289
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+ +Y++ N + A K F IE DL+SWN+ I A S + + +F EM ++P
Sbjct: 290 LGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYS-SLKP 348
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D T ++L AC G +++ G+ IH++L+++ L DV V N+L++MY +C + +F
Sbjct: 349 DGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVF 408
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG--- 418
+E R+VV+WN+I+ A HR KLF + ++ D ++ +L+A G
Sbjct: 409 HETNDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFE 468
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
+ K+ AY + G+ D LID + G L +A + + G+D +L
Sbjct: 469 MAKQVHAYAFKV----GLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSL 524
Query: 479 L 479
+
Sbjct: 525 I 525
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 192/383 (50%), Gaps = 8/383 (2%)
Query: 110 CAGIQSLVKGQQIH----AYSLKFGY-ASISFVGNSLISMYMKVGYSSDALLVYGEAFEP 164
C+ ++S +G+ +H A S Y A + + N LI+MY + A +V+ +
Sbjct: 50 CSRLRSFPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDR 109
Query: 165 NLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILH 224
N VS+ A+IA +N + +F MLR G PD F+ + C+ DL G +H
Sbjct: 110 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVH 169
Query: 225 CLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYE 284
+K + V N ++ +YSK +G+ F I +KDL SW + IA +
Sbjct: 170 AQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREM 229
Query: 285 KGLSVFKEMSNDHGVRPDDFTFASILAACA-GLASVQHGKQIHAHLIRMRLNQDVGVGNA 343
L +F+EM + P++F F S+ AC+ + S+++G+QIH ++ +L+++ G +
Sbjct: 230 DALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCS 289
Query: 344 LVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPD 403
L +MYA+C + + K+F + ++VSWN++I A + L A+ LF +M+ + +KPD
Sbjct: 290 LGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPD 349
Query: 404 SVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYT 463
+T + LL AC +++G + + + K G+ D+ LI + R A +
Sbjct: 350 GITVMALLCACVGCDALRQGRSIHSYLVKL-GLGGDVMVCNSLISMYTRCLDFPSAMDVF 408
Query: 464 KKFPLGQDPIVLGTLLSACRLRR 486
+ +D + ++L+AC R
Sbjct: 409 HETN-DRDVVTWNSILTACVQHR 430
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 208/629 (33%), Positives = 317/629 (50%), Gaps = 59/629 (9%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ + +SLL C + L G +HA LK G V +L +Y + G + A VF
Sbjct: 62 SSTYASLLESC---RTLNLGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLVFV 118
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVK 118
+M +RNL SW+A++S H G AL F ++ L ++F + C G++ L
Sbjct: 119 KMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLEL 178
Query: 119 GQQIHAYSLK----FGYASISFVGNSLISMY----MKVGYSSDA-------LLVYGEAFE 163
G+Q+H +K G A F G S+ ++ M VGY + L E
Sbjct: 179 GRQLHGVVIKRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVG 238
Query: 164 PNLVSFNALIAGFVENQQPEKGFEVFK-LMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
+ +S+N++I+G+ +N ++ +F+ L++ +G+ D F+ L C+ LR+G
Sbjct: 239 KDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKE 298
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
+H V L N FVG ++ +YSK + A+ AF + E+D +WN I+ + C
Sbjct: 299 VHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQ 358
Query: 283 YEK-----------------------------------GLSVFKEMSNDHGVRPDDFTFA 307
E L +F EM +RPD +T
Sbjct: 359 LENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTS-SLRPDIYTVG 417
Query: 308 SILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR 367
IL ACA LA++ GKQ+HAH IR DV +G ALV+MYAKCG I + +++N + +
Sbjct: 418 IILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNP 477
Query: 368 NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYF 427
N+VS N ++ A+A H G + LF M G +PD VTF+ +L++C HAG V+ G +F
Sbjct: 478 NLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFF 537
Query: 428 NSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRD 487
+ M Y ++P ++H+TC++DLL RAG+L EA E KK P D ++ G LL C + +
Sbjct: 538 DLM-TYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGN 596
Query: 488 VVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIE 547
V +GE A+ L L+P T YVLL+NLYA G W D+ R+M+KD G+ K P S IE
Sbjct: 597 VELGEIAAESLIELEPNNTGNYVLLANLYAYAGRWHDLDRTRQMIKDRGMHKSPGCSWIE 656
Query: 548 VQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
+ F + SH K +I L L+
Sbjct: 657 DREDIHVFLSCDKSHEKTEDIYTTLDNLN 685
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 186/568 (32%), Positives = 298/568 (52%), Gaps = 4/568 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S L C K ++L G +H + + P + N +L +Y CG I +KVFDEM
Sbjct: 89 SYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEM 148
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+NLVSW +IS + + GE A+ FS M + PN ++ S + +C G L G+
Sbjct: 149 LMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGK 208
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH++ ++ + V ++ +MY++ G+ A LV+ N V++ L+ G+ + +
Sbjct: 209 QIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAK 268
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ E E+F M +G+ D F F+ L++C D G +H VK ES VG
Sbjct: 269 KLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGT 328
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ Y K I A ++F I E + +SW+ I+ S E + +F + ++ GV
Sbjct: 329 PLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSE-GVV 387
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ F + S+ ACA A++ G Q H I+ L + +A+V MY+KCG + + +
Sbjct: 388 LNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRA 447
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F + + V+W II+ +A H AL F +M++ G++P++VTFI +LTAC+H+GLV
Sbjct: 448 FESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLV 507
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
E + Y SM + YG+ P I+H+ C+ID RAG L EA E + P D + +LL
Sbjct: 508 AEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLG 567
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
C D+ +G+ A+ LF L P T+ Y+LL NLY++ G W + RK++ + LKKE
Sbjct: 568 GCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKE 627
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
S S I V+G +F V + H + I
Sbjct: 628 VSCSWISVKGQVHRFVVGDRHHPQTEAI 655
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
KEM +D V ++ + AC L S+ G+ IH L R N + N L+ MY
Sbjct: 75 LKEM-DDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYC 133
Query: 350 KCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
CG K+F+EML +N+VSW +I+A+A + A++LF M+A+GI+P+S ++
Sbjct: 134 DCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMS 193
Query: 410 LLTAC 414
LL +C
Sbjct: 194 LLQSC 198
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 193/614 (31%), Positives = 328/614 (53%), Gaps = 45/614 (7%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKC--GKMILARKVF 60
KS L +C L+Q + + + ++G++ D N ++ A G + A K+F
Sbjct: 144 KSCIECLRNCKSMDQLKQ---IQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIF 200
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLV 117
+ + + +L ++ M+ + + G L F Q+ L P+ + + + A ++ +
Sbjct: 201 NYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVR 260
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+G+++ + +K G ++V NSLI MY ++ +A ++ E + VS+N +I+G+V
Sbjct: 261 QGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYV 320
Query: 178 ENQQPEKGFEVFKLMLRQG-LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
++ E F+ M ++G PD + L C+ +L G +H V+ +L
Sbjct: 321 RCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY-VRKELGFTT 379
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD-------------- 282
+ N ++ +Y+K + A F + K++I W + I+ +C D
Sbjct: 380 RIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVR 439
Query: 283 -----------------YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
++ +++F+EM V+PD FT ++L CA L +++ GK I
Sbjct: 440 DVVLWTAMINGYVQFHHFDDAVALFREMQIQR-VKPDKFTVVTLLTGCAQLGALEQGKWI 498
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
H +L R+ DV VG AL+ MY+KCG + S ++F E+ ++ SW +II A +
Sbjct: 499 HGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKT 558
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
AL+LF +M+ G KPD +TFIG+L+AC+H GLV+EG +FNSM+K + I P +EH+ C
Sbjct: 559 SEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGC 618
Query: 446 LIDLLGRAGKLLEAEEYTKKFPLGQDPIVL---GTLLSACRLRRDVVIGERLAKQLFHLQ 502
+IDLLGRAG L EAEE ++ P+ IV+ G LLSACR+ +V +GERLAK+L +++
Sbjct: 619 VIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIE 678
Query: 503 PTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
+S + LL+N+YAS W D R+ +K+ G+KK P S+IEV G +F V + SH
Sbjct: 679 SCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSH 738
Query: 563 SKIGEINYMLKTLS 576
++ EI ML ++
Sbjct: 739 PEMMEICSMLNRVT 752
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 212/621 (34%), Positives = 327/621 (52%), Gaps = 65/621 (10%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLN-------LYAKCGKMILARKV 59
SLLH+C K LQ +HA ++K+G+ +N+ L+ L + A V
Sbjct: 38 SLLHNC---KTLQSLRIIHAQMIKIGLHN----TNYALSKLIEFCILSPHFEGLPYAISV 90
Query: 60 FDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSL 116
F + E NL+ W+ M GH + + + AL+ + M LLPN Y F + +CA ++
Sbjct: 91 FKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAF 150
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMK----------------------------- 147
+GQQIH + LK G +V SLISMY++
Sbjct: 151 KEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGY 210
Query: 148 --VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA 205
GY +A ++ E ++VS+NA+I+G+ E ++ E+FK M++ + PD +
Sbjct: 211 ASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMV 270
Query: 206 GGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE- 264
+ C+ S + G +H SN + N ++ LYSK GE E A L E
Sbjct: 271 TVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSK---CGELETACGLFERL 327
Query: 265 --KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG 322
KD+ISWNT I +H Y++ L +F+EM G P+D T SIL ACA L ++ G
Sbjct: 328 PYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS-GETPNDVTMLSILPACAHLGAIDIG 386
Query: 323 KQIHAHLIRMRLNQDVGVGNA------LVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
+ IH + I RL GV NA L++MYAKCG I ++++FN +LH+++ SWN +I
Sbjct: 387 RWIHVY-IDKRLK---GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 442
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
A H ++ LF +M+ GI+PD +TF+GLL+AC+H+G++ G F +M + Y +
Sbjct: 443 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKM 502
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAK 496
+P +EH+ C+IDLLG +G EAEE + D ++ +LL AC++ +V +GE A+
Sbjct: 503 TPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAE 562
Query: 497 QLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFT 556
L ++P YVLLSN+YAS G W +VA R +L D G+KK P S IE+ +F
Sbjct: 563 NLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFI 622
Query: 557 VAEFSHSKIGEINYMLKTLSL 577
+ + H + EI ML+ + +
Sbjct: 623 IGDKFHPRNREIYGMLEEMEV 643
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 180/579 (31%), Positives = 315/579 (54%), Gaps = 6/579 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L C++ + + G +H +K+ + +++V+N ++++Y+K G +I ++ +F
Sbjct: 278 TVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLN 337
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM-----HLLPNEYIFASAISACAGIQSLVK 118
+ +N+VSW+ M+ G G+ + QM + +E +A+ C L
Sbjct: 338 NNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPS 397
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+++H YSLK + + N+ ++ Y K G S A V+ L S+NALI G+ +
Sbjct: 398 LKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQ 457
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ P + M GLLPD F+ L CS LR G +H ++ LE + FV
Sbjct: 458 SSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 517
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++++LY + + F +E+ L+SWNT I E+ L +F++M +G
Sbjct: 518 YLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVL-YG 576
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
++P + ++ AC+ L S++ G++ HA+ ++ L + + ++++MYAK G I+ S
Sbjct: 577 IQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSS 636
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
K+FN + ++ SWN +I + H A+KLFE+M+ TG PD +TF+G+LTACNH+G
Sbjct: 637 KVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSG 696
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
L+ EG Y + M+ ++G+ P+++H+ C+ID+LGRAG+L A + D + +L
Sbjct: 697 LLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSL 756
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
LS CR+ +++ +GE++A +LF L+P YVLLSNLYA G W DV R+ +K+ L+
Sbjct: 757 LSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLR 816
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
K+ S IE+ G F V E EI + L +
Sbjct: 817 KDAGCSWIELNGKVFSFVVGERFLDGFEEIKSLWSILEM 855
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 205/414 (49%), Gaps = 18/414 (4%)
Query: 8 LLHHCSKTKALQQGISLHAAVL-KMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
LL K K ++ G +H V ++ D ++ ++ +YA CG +R FD + +
Sbjct: 90 LLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSK 149
Query: 67 NLVSWSAMISGHHQAGEHLLALEFF----SQMHLLPNEYIFASAISACAGIQSLVKGQQI 122
NL W+A+IS + + + LE F S+ HLLP+ + F I ACAGI + G +
Sbjct: 150 NLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAV 209
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H +K G FVGN+L+S Y G+ SDAL ++ E NLVS+N++I F +N
Sbjct: 210 HGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGDD 269
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
+PD + L +C+ ++ G +H VK L+ V N +
Sbjct: 270 ------------GAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNAL 317
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM-SNDHGVRP 301
M +YSK+ I +++ F+L K+++SWNT + S D + ++M + V+
Sbjct: 318 MDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKA 377
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D+ T + + C + + K++H + ++ D + NA V YAKCG +S + ++F
Sbjct: 378 DEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVF 437
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ + + + SWN +I +A +L QMK +G+ PD+ T LL+AC+
Sbjct: 438 HGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACS 491
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 136/288 (47%), Gaps = 41/288 (14%)
Query: 143 SMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFK------------ 190
S + + Y+S+A+ + N F I+ F E +K F V +
Sbjct: 24 SSFPRADYNSNAI----SSNSTNANHFLRRISNFCETGDLDKSFRVVQEFAGDDESSSDV 79
Query: 191 -LMLRQ--GLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVGNTIMALY 246
L++R+ GLL L+ D+ G I H ++ +L S+ + I+ +Y
Sbjct: 80 FLLVREALGLL---------LQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMY 130
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
+ ++ AF + K+L WN I++ S Y + L +F +M + + PD+FTF
Sbjct: 131 AMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTF 190
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
++ ACAG++ V G +H +++ L +D+ VGNALV+ Y G +S + KLF+ M
Sbjct: 191 PCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPE 250
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
RN+VSWN++I +++ G+ + PD T + +L C
Sbjct: 251 RNLVSWNSMIRVFSDNGDDGAFM------------PDVATVVTVLPVC 286
>gi|225462731|ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|302143682|emb|CBI22543.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 200/613 (32%), Positives = 314/613 (51%), Gaps = 52/613 (8%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD-- 61
+ SS+L C++ + L+ G +H VLK G + +V + +L YA C ++ AR+VFD
Sbjct: 100 TFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVL 159
Query: 62 -----------------------------EMSERNLVSWSAMISGHHQAGEHL-LALEFF 91
+M R++V+W+ +ISG + G+ ALE F
Sbjct: 160 VRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEIF 219
Query: 92 SQM----HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMK 147
M PNE+ F + AC + L G+ +H +K G +G +L+ Y +
Sbjct: 220 RLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCE 279
Query: 148 VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGG 207
DAL V P L + N+LI G + + E VF M + G
Sbjct: 280 CEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGY 339
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE--- 264
+ + R + C T+ F NT++++YS+ GE +KA L EE
Sbjct: 340 AVGGQMDDSKRLFEKMPCRTI--------FSSNTMISVYSRN---GEIDKALELFEETKN 388
Query: 265 -KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGK 323
KD ++WN+ I+ H E+ L ++ M + ++ TF+++ AC+ L S+ G+
Sbjct: 389 EKDPVTWNSMISGYIHSGQPEEALKLYITM-HRLSIQQTQSTFSALFHACSCLGSLHQGQ 447
Query: 324 QIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR 383
+HAHLI+ +V VG +L++MY+KCG I + F + NV +W +I HA H
Sbjct: 448 LLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHG 507
Query: 384 LGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF 443
LG A+ LF++M G+ P+ TF+G+L+AC+ AGLV EG F+SME+ Y ++P +EH+
Sbjct: 508 LGSEAISLFDRMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHY 567
Query: 444 TCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQP 503
C++DLLGR+G + EAEE+ KK PL D +V G LLSAC D+ +GER+A+++F P
Sbjct: 568 ACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDP 627
Query: 504 TTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHS 563
S YV+LSN+YA G W + RK+L+ +KK+P S IE+ F++ + SH
Sbjct: 628 KPISSYVILSNIYAGLGRWREKMMVRKILRGFKVKKDPGCSWIELNNKIHVFSIEDRSHP 687
Query: 564 KIGEINYMLKTLS 576
I L+ L+
Sbjct: 688 YCNMIYATLEHLT 700
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 133/325 (40%), Gaps = 63/325 (19%)
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL 198
N IS Y K A ++ + + +VS+N +I+ + ++ + + + M R +
Sbjct: 36 NIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHRSHMK 95
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKA 258
+F+ L +C+ LR G ++HCL +K ES VG+ ++ Y+ IGEA +
Sbjct: 96 LSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRV 155
Query: 259 FRLI-------------------------------EEKDLISWNTFIAACSHCAD-YEKG 286
F ++ +D+++W T I+ S D K
Sbjct: 156 FDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKA 215
Query: 287 LSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVN 346
L +F+ M P++FTF ++ AC L + G+ +H L++ L D +G ALV
Sbjct: 216 LEIFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVE 275
Query: 347 MYAKC--------------------------GLISC-----SYKLFNEMLHRNVVSWNTI 375
Y +C GLIS + +FN M N VS+N +
Sbjct: 276 FYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLM 335
Query: 376 IAAHANHRLGGSALKLFEQMKATGI 400
I +A + +LFE+M I
Sbjct: 336 IKGYAVGGQMDDSKRLFEKMPCRTI 360
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 110/223 (49%), Gaps = 16/223 (7%)
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N ++ Y+K + + A + F + ++ ++SWNT I++ S + + L + M H +
Sbjct: 36 NIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHRSH-M 94
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+ + TF+S+L+ CA L ++ GK IH +++ VG+AL+ YA C I + +
Sbjct: 95 KLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARR 154
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F+ ++ RN V W+ ++ + + AL +F +M + D V + L++ G
Sbjct: 155 VFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMP----RRDVVAWTTLIS-----GF 205
Query: 420 VKEGEA------YFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
K G+ F M ++ +P+ F C++ GR G L
Sbjct: 206 SKNGDGCGKALEIFRLMMRSGETTPNEFTFDCVVRACGRLGIL 248
>gi|15228257|ref|NP_188283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274288|sp|Q9LUS3.1|PP237_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16610
gi|11994615|dbj|BAB02752.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332642322|gb|AEE75843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 194/548 (35%), Positives = 299/548 (54%), Gaps = 9/548 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L C+ +A+ G +H+ V D+ V +++ YAKCG++ +A KVFDEM +R+
Sbjct: 109 VLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRD 168
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQQIH 123
+V+W+AMISG + F M L PN A +L +G+ +H
Sbjct: 169 MVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVH 228
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
Y + G+++ V ++ +Y K A V+ F+ N V+++A+I G+VEN+ +
Sbjct: 229 GYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIK 288
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEI--CSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ EVF ML + A GL + C+ DL G +HC VK + V NT
Sbjct: 289 EAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNT 348
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
I++ Y+K+ + +A + F I KD+IS+N+ I C E+ +F EM G+RP
Sbjct: 349 IISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTS-GIRP 407
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D T +L AC+ LA++ HG H + + + + NAL++MY KCG + + ++F
Sbjct: 408 DITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVF 467
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ M R++VSWNT++ H LG AL LF M+ TG+ PD VT + +L+AC+H+GLV
Sbjct: 468 DTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVD 527
Query: 422 EGEAYFNSMEK-TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG+ FNSM + + + P I+H+ C+ DLL RAG L EA ++ K P D VLGTLLS
Sbjct: 528 EGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLS 587
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC ++ +G ++K++ L TT S VLLSN Y++ W D A R + K GL K
Sbjct: 588 ACWTYKNAELGNEVSKKMQSLGETTES-LVLLSNTYSAAERWEDAARIRMIQKKRGLLKT 646
Query: 541 PSYSMIEV 548
P YS ++V
Sbjct: 647 PGYSWVDV 654
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 227/459 (49%), Gaps = 11/459 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLK--MGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
SLL C +++ L G +H +LK + + ++ N + LYA C ++ LAR VFDE+
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDEIP 62
Query: 65 ER--NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
N ++W MI + AL+ + +M + P +Y + + ACAG++++ G
Sbjct: 63 HPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDG 122
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ IH++ +A+ +V +L+ Y K G A+ V+ E + ++V++NA+I+GF +
Sbjct: 123 KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLH 182
Query: 180 QQPEKGFEVFKLMLR-QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+F M R GL P+ + G + LR+G +H + ++ V
Sbjct: 183 CCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVV 242
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA-CSHCADYEKGLSVFKEMSNDH 297
I+ +Y+K I A + F L +K+ ++W+ I + E G F+ + ND+
Sbjct: 243 KTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDN 302
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
IL CA + G+ +H + ++ D+ V N +++ YAK G + +
Sbjct: 303 VAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDA 362
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++ F+E+ ++V+S+N++I + + +LF +M+ +GI+PD T +G+LTAC+H
Sbjct: 363 FRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHL 422
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+ G + + +G + + L+D+ + GKL
Sbjct: 423 AALGHGSS-CHGYCVVHGYAVNTSICNALMDMYTKCGKL 460
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 174/389 (44%), Gaps = 13/389 (3%)
Query: 102 IFASAISACAGIQSLVKGQQIHAYSLKFGYA-SISFVGNSLISMYMKVGYSSDALLVYGE 160
+F S + C ++LV GQ IH + LK S S V +L +Y A V+ E
Sbjct: 1 MFLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDE 60
Query: 161 AFEP--NLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLR 218
P N ++++ +I + N EK +++ ML G+ P ++++ L+ C+ +
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
G ++H ++ +V ++ Y+K + A K F + ++D+++WN I+ S
Sbjct: 121 DGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS 180
Query: 279 -HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD 337
HC + +F +M G+ P+ T + A +++ GK +H + RM + D
Sbjct: 181 LHCC-LTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSND 239
Query: 338 VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-- 395
+ V ++++YAK I + ++F+ +N V+W+ +I + + + A ++F QM
Sbjct: 240 LVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLV 299
Query: 396 --KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 453
+ P ++ I L C G + G K G D+ +I +
Sbjct: 300 NDNVAMVTPVAIGLI--LMGCARFGDLSGGRCVHCYAVKA-GFILDLTVQNTIISFYAKY 356
Query: 454 GKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G L +A + L +D I +L++ C
Sbjct: 357 GSLCDAFRQFSEIGL-KDVISYNSLITGC 384
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 138/298 (46%), Gaps = 6/298 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I +L C++ L G +H +K G D+ V N +++ YAK G + A + F E+
Sbjct: 310 AIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEI 369
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
++++S++++I+G + F +M + P+ ++AC+ + +L G
Sbjct: 370 GLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGS 429
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
H Y + GYA + + N+L+ MY K G A V+ + ++VS+N ++ GF +
Sbjct: 430 SCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHG 489
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG- 239
++ +F M G+ PD + L CS S + +G L + P +
Sbjct: 490 LGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDH 549
Query: 240 -NTIMALYSKFNLIGEA-EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
N + L ++ + EA + ++ E D+ T ++AC + E G V K+M +
Sbjct: 550 YNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQS 607
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 192/584 (32%), Positives = 323/584 (55%), Gaps = 16/584 (2%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
++ S + CS + L G +H V+KM Q D V +L +YAK G + A+KVF
Sbjct: 243 VSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVF 302
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL--LP-NEYIFASAISACAGIQSLV 117
D++ ++ + +AMIS G AL +++M P + + +S +S C+ + S
Sbjct: 303 DQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYD 362
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+ +HA +K S + ++L++MY K G + DA V+ E ++V++ ++IAGF
Sbjct: 363 FGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFC 422
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDR------FSFAGGLEICSVSNDLRKGMILHCLTVKCK 231
+N++ + ++F+ M ++G+ D S GLE ++ G ++H +K
Sbjct: 423 QNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLE------NVELGHLIHGFAIKRG 476
Query: 232 LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK 291
LES+ FV +++ +YSKF AE F + K+L++WN+ I+ S E +++
Sbjct: 477 LESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLP 536
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
++ HG D + ++L A + +A++ GK +HA+ IR+++ D+ V NAL++MY KC
Sbjct: 537 QILQ-HGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKC 595
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
G + + +F M RN+V+WN++IA + +H A++LF++MK + PD VTF+ L+
Sbjct: 596 GCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALI 655
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQD 471
T+C+H+G+V+EG F M YG+ P +EH+ ++DLLGRAG+L +A + + P+ D
Sbjct: 656 TSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDAD 715
Query: 472 PIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKM 531
V LL ACR R++ +GE +A L ++P S YV L NLY MW A R
Sbjct: 716 RSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRAS 775
Query: 532 LKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+K GLKK P S IEV+ + F + S ++ EI L +L
Sbjct: 776 MKGRGLKKSPGCSWIEVKNRVDVFFSGDSSSTRRIEIYKTLSSL 819
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 208/417 (49%), Gaps = 25/417 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SLL C+ L G ++HA+++ MG+Q D ++ ++N+Y KCG + A +VFD+M
Sbjct: 57 TFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKM 116
Query: 64 SER-----NLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVK 118
SE ++ W+ +I G+ + G L F +M L +
Sbjct: 117 SESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQEL----------------SWYMA 160
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGE-AFEPNLVSFNALIAGFV 177
G+QIH Y ++ + ++ +LI MY +A ++G+ N+V++N +I GFV
Sbjct: 161 GRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFV 220
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
EN EK E++ L + SF G CS L G +HC +K + +P+
Sbjct: 221 ENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPY 280
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V +++ +Y+K + +A+K F + +K++ N I+A L ++ +M
Sbjct: 281 VCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMK--A 338
Query: 298 GVRP-DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
G P D FT +S+L+ C+ + S G+ +HA +I+ + +V + +AL+ MY KCG
Sbjct: 339 GETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTED 398
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ +F M R+VV+W ++IA +R AL LF M+ G+K DS +++A
Sbjct: 399 ADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISA 455
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 190/424 (44%), Gaps = 46/424 (10%)
Query: 80 QAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF 136
Q G++ ALE S+ L ++ F S + CA + +L G+ IHA + G S +
Sbjct: 32 QQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPY 91
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFE-----PNLVSFNALIAGFVENQQPEKGFEVFKL 191
+ SLI+MY+K G AL V+ + E P++ +N +I G+ + E+G F
Sbjct: 92 IATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCR 151
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
M + G +I H ++ E +P++ ++ +YS +
Sbjct: 152 MQELSW------YMAGRQI-------------HGYIIRNMFEGDPYLETALIGMYSSCSR 192
Query: 252 IGEAEKAFRLIEEK-DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
EA F +E + ++++WN I +EK L ++ ++ + + +F
Sbjct: 193 PMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYS-LAKNENCKLVSASFTGAF 251
Query: 311 AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVV 370
AC+ + G+Q+H +I+M D V +L+ MYAK G + + K+F+++L + V
Sbjct: 252 TACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVE 311
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG-----EA 425
N +I+A + AL L+ +MKA DS T LL+ C+ G G E
Sbjct: 312 LRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEV 371
Query: 426 YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE--YTKKFPLGQDPIVLGTLLSA-C 482
SM+ I + L+ + + G +A+ YT K +D + G++++ C
Sbjct: 372 IKRSMQSNVAIQ------SALLTMYYKCGSTEDADSVFYTMK---ERDVVAWGSMIAGFC 422
Query: 483 RLRR 486
+ RR
Sbjct: 423 QNRR 426
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 180/530 (33%), Positives = 292/530 (55%), Gaps = 8/530 (1%)
Query: 40 SNHVLNLYAKCG----KMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH 95
N++LN+ +C R +F ++ + N+ W+ MI G A+EF+ M
Sbjct: 45 DNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMR 104
Query: 96 ---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSS 152
LPN + F + ACA + L G +IH +K G+ FV SL+ +Y K GY
Sbjct: 105 SEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLE 164
Query: 153 DALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
DA V+ + + N+VS+ A+I+G++ + + ++F+ +L L PD F+ L C+
Sbjct: 165 DAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACT 224
Query: 213 VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNT 272
DL G +H ++ + N FVG +++ +Y+K + +A F + EKD++SW
Sbjct: 225 QLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGA 284
Query: 273 FIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
I + ++ + +F +M ++ V+PD +T +L+ACA L +++ G+ + + R
Sbjct: 285 MIQGYALNGLPKEAIDLFLQMQREN-VKPDCYTVVGVLSACARLGALELGEWVSGLVDRN 343
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
+ +G AL+++YAKCG +S ++++F M ++ V WN II+ A + + LF
Sbjct: 344 EFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLF 403
Query: 393 EQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
Q++ GIKPD TFIGLL C HAGLV EG YFNSM + + ++P IEH+ C++DLLGR
Sbjct: 404 GQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGR 463
Query: 453 AGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLL 512
AG L EA + + P+ + IV G LL ACR+ RD + E KQL L+P + YVLL
Sbjct: 464 AGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLL 523
Query: 513 SNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
SN+Y+++ W + A R + + ++K P S IEV G +F V + H
Sbjct: 524 SNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYH 573
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 194/381 (50%), Gaps = 6/381 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L C++ LQ G+ +H V+K G DV V ++ LYAKCG + A KVFD++ ++N
Sbjct: 118 VLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKN 177
Query: 68 LVSWSAMISGHHQAGEHLLALEFFS---QMHLLPNEYIFASAISACAGIQSLVKGQQIHA 124
+VSW+A+ISG+ G+ A++ F +M+L P+ + +SAC + L G+ IH
Sbjct: 178 VVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHK 237
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
++ G FVG SL+ MY K G A V+ E ++VS+ A+I G+ N P++
Sbjct: 238 CIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKE 297
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
++F M R+ + PD ++ G L C+ L G + L + + NP +G ++
Sbjct: 298 AIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALID 357
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
LY+K + A + F+ ++EKD + WN I+ + + +F ++ G++PD
Sbjct: 358 LYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEK-LGIKPDGN 416
Query: 305 TFASILAACAGLASVQHGKQIHAHLIR-MRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
TF +L C V G++ + R L + +V++ + GL+ +++L
Sbjct: 417 TFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRN 476
Query: 364 M-LHRNVVSWNTIIAAHANHR 383
M + N + W ++ A HR
Sbjct: 477 MPMEANAIVWGALLGACRIHR 497
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 196/371 (52%), Gaps = 5/371 (1%)
Query: 112 GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNA 171
G S + +HA+ L+FG +++ N ++ ++ ++ + +PN+ +N
Sbjct: 23 GFNSFKHLKHLHAHLLRFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNT 82
Query: 172 LIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK 231
+I G V N + E + LM +G LP+ F+F L+ C+ DL+ G+ +H L VK
Sbjct: 83 MIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGG 142
Query: 232 LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK 291
+ + FV +++ LY+K + +A K F I +K+++SW I+ + + + +F+
Sbjct: 143 FDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFR 202
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
+ + + PD FT +L+AC L + G+ IH ++ M + ++V VG +LV+MYAKC
Sbjct: 203 RLL-EMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKC 261
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
G + + +F+ M +++VSW +I +A + L A+ LF QM+ +KPD T +G+L
Sbjct: 262 GNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVL 321
Query: 412 TACNHAGLVKEGEAYFNSMEKT-YGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQ 470
+AC G ++ GE +++ + +P + T LIDL + G + A E K +
Sbjct: 322 SACARLGALELGEWVSGLVDRNEFLYNPVLG--TALIDLYAKCGSMSRAWEVFKGMK-EK 378
Query: 471 DPIVLGTLLSA 481
D +V ++S
Sbjct: 379 DRVVWNAIISG 389
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 140/283 (49%), Gaps = 13/283 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I +L C++ L G +H +++MG+ +V V ++++YAKCG M AR VFD M
Sbjct: 215 TIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGM 274
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
E+++VSW AMI G+ G A++ F QM ++ P+ Y +SACA + +L G+
Sbjct: 275 PEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGE 334
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+ + + +G +LI +Y K G S A V+ E + V +NA+I+G N
Sbjct: 335 WVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNG 394
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-----ILHCLTVKCKLESN 235
+ F +F + + G+ PD +F G L C+ + + +G + ++ +E
Sbjct: 395 YVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHY 454
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFR-LIEEKDLISWNTFIAAC 277
++ L + L+ EA + R + E + I W + AC
Sbjct: 455 ----GCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGAC 493
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 191/614 (31%), Positives = 318/614 (51%), Gaps = 45/614 (7%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKC--GKMILARKVF 60
+S S L C L+Q +HA + ++G+ D++ N ++ G + A K+F
Sbjct: 38 QSCISYLKSCKSMTHLKQ---IHAQIFRVGLHQDIVSLNKLMAFCTDPFNGNLNYAEKMF 94
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLV 117
+ L+ ++ +I + G + L FS++ L P+ + + A + +
Sbjct: 95 KYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVFKAIGYLGEVS 154
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
K +++ K G ++V NSLI MY ++ + +++ E + +++S+N +I+G+V
Sbjct: 155 KAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYV 214
Query: 178 ENQQPEKGFEVF-KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
+ ++ E VF ++ GL+PD + L C+ L G +H V+ ++ P
Sbjct: 215 KCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHHY-VRDNVKFTP 273
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD-------------- 282
+GN ++ +Y K + A F + K++I W T ++ ++C +
Sbjct: 274 IIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEARELFEGSPIR 333
Query: 283 -----------------YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
+++ +++F+EM V+PD F S+L CA +++ GK I
Sbjct: 334 DVVIWTAMINGYVQFNRFDEAVALFREM-QIRKVKPDKFIVVSLLTGCAQTGAIEQGKWI 392
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
H + R+ D VG AL+ MYAKCG I + ++F + ++ SW +II A +
Sbjct: 393 HEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSIICGLAMNGKT 452
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
AL+LF +MK G++PD +TFIG+L+AC+H GLV+EG +FNSM Y I P +EH+ C
Sbjct: 453 SKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYGC 512
Query: 446 LIDLLGRAGKLLEAEEYTKKFPLGQDPIVL---GTLLSACRLRRDVVIGERLAKQLFHLQ 502
L+DLLGRAG L EAEE KK P I + G+LLSACR+ +V +GER+AKQL +
Sbjct: 513 LVDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSACRIYGNVEMGERVAKQLVKFE 572
Query: 503 PTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
+ +S + LL+N+YA W DV R+ +KD G+KK P S IEV +F SH
Sbjct: 573 SSDSSVHTLLANIYAFADRWEDVTKVRRKMKDLGVKKTPGCSSIEVDSIIHEFFSGHPSH 632
Query: 563 SKIGEINYMLKTLS 576
++ EI YML ++
Sbjct: 633 PEMREIYYMLNIMA 646
>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic-like [Glycine max]
Length = 903
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 186/563 (33%), Positives = 323/563 (57%), Gaps = 15/563 (2%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G LH+ ++ G++ ++++ ++ +YAKC +M A KV + + ++ W+++ISG Q
Sbjct: 238 GKVLHSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQ 297
Query: 81 AGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
+ A+ M L LPN + +AS ++A + + SL G+Q H+ + G +V
Sbjct: 298 NSQVREAVNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYV 357
Query: 138 GNSLISMYMKVGYSS-DALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
GN+L+ MYMK +++ + + + PN++S+ +LIAGF E+ E+ ++F M G
Sbjct: 358 GNALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAG 417
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
+ P+ F+ + L CS + + LH +K +++ + VGN ++ Y+ + EA
Sbjct: 418 VQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAW 477
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
++ +D+I++ T A + D+E L V M ND V+ D+F+ AS ++A AGL
Sbjct: 478 SVIGMMNHRDIITYTTLAARLNQQGDHEMALRVITHMCNDE-VKMDEFSLASFISAAAGL 536
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
++ GKQ+H + + + V N+LV+ Y+KCG + +Y++F ++ + VSWN +I
Sbjct: 537 GIMETGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVSWNGLI 596
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
+ A++ L AL F+ M+ G+KPDSVTF+ L+ AC+ L+ +G YF SMEKTY I
Sbjct: 597 SGLASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFACSQGSLLNQGLDYFYSMEKTYHI 656
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAK 496
+P ++H+ CL+DLLGR G+L EA + P D ++ TLL+AC L +V +GE +A+
Sbjct: 657 TPKLDHYVCLVDLLGRGGRLEEAMGVIETMPFKPDSVIYKTLLNACNLHGNVPLGEDMAR 716
Query: 497 QLFHLQPTTTSPYVLLSNLYASDGM--WGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEK 554
+ L P + Y+LL++LY + G+ +GD RK++++ GL++ P +EV+
Sbjct: 717 RCLELDPCDPAIYLLLASLYDNAGLPDFGD--KTRKLMRERGLRRSPRQCWMEVKSKIYL 774
Query: 555 FTVAEFSHSKIG--EINYMLKTL 575
F+ E KIG EIN L++L
Sbjct: 775 FSARE----KIGNDEINEKLESL 793
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 122/407 (29%), Positives = 226/407 (55%), Gaps = 8/407 (1%)
Query: 15 TKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAM 74
++ L++G +H+ ++K+G+Q D+ +SN++L LYAKC + AR +FDEM R++VSW+ +
Sbjct: 29 SQTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPHRDVVSWTTL 88
Query: 75 ISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGY 131
+S H + H AL+ F M PNE+ +SA+ +C+ + G +IHA +K G
Sbjct: 89 LSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHASVVKLGL 148
Query: 132 ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKL 191
+G +L+ +Y K + + + + ++VS+ +I+ VE + + +++
Sbjct: 149 ELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQLYVK 208
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGM--ILHCLTVKCKLESNPFVGNTIMALYSKF 249
M+ G+ P+ F+F L + S L KG +LH + +E N + I+ +Y+K
Sbjct: 209 MIEAGIYPNEFTFVKLLGMPSFLG-LGKGYGKVLHSQLITFGVEMNLMLKTAIICMYAKC 267
Query: 250 NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
+ +A K + + D+ W + I+ + + ++ +M G+ P++FT+AS+
Sbjct: 268 RRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELS-GILPNNFTYASL 326
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS-YKLFNEMLHRN 368
L A + + S++ G+Q H+ +I + L D+ VGNALV+MY KC + + K F + N
Sbjct: 327 LNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAFRGIALPN 386
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
V+SW ++IA A H +++LF +M+A G++P+S T +L AC+
Sbjct: 387 VISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACS 433
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 233/456 (51%), Gaps = 25/456 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS L CS + G +HA+V+K+G++ + ++ +++LY KC + K+ +
Sbjct: 119 TLSSALRSCSALGEFEFGAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFV 178
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK-- 118
+ ++VSW+ MIS + + AL+ + +M + PNE+ F + G+ S +
Sbjct: 179 KDGDVVSWTTMISSLVETSKWSEALQLYVKMIEAGIYPNEFTFVKLL----GMPSFLGLG 234
Query: 119 ---GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
G+ +H+ + FG + ++I MY K DA+ V + + ++ + ++I+G
Sbjct: 235 KGYGKVLHSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISG 294
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
FV+N Q + M G+LP+ F++A L S L G H + LE +
Sbjct: 295 FVQNSQVREAVNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGD 354
Query: 236 PFVGNTIMALYSKFN-LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
+VGN ++ +Y K + KAFR I ++ISW + IA + E+ + +F EM
Sbjct: 355 IYVGNALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEM- 413
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
GV+P+ FT ++IL AC+ + S+ K++H ++I+ +++ D+ VGNALV+ YA G+
Sbjct: 414 QAAGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMA 473
Query: 355 SCSYKLFNEMLHRNVVSWNTIIA---AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
++ + M HR+++++ T+ A +H + AL++ M +K D + +
Sbjct: 474 DEAWSVIGMMNHRDIITYTTLAARLNQQGDHEM---ALRVITHMCNDEVKMDEFSLASFI 530
Query: 412 TACNHAGLVKEGE-----AYFNSMEKTYGISPDIEH 442
+A G+++ G+ ++ + E+ +S + H
Sbjct: 531 SAAAGLGIMETGKQLHCYSFKSGFERCNSVSNSLVH 566
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 168/337 (49%), Gaps = 3/337 (0%)
Query: 114 QSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALI 173
Q+L +G +H+ +K G ++ N+L+ +Y K A ++ E ++VS+ L+
Sbjct: 30 QTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPHRDVVSWTTLL 89
Query: 174 AGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE 233
+ N+ + ++F +ML G P+ F+ + L CS + G +H VK LE
Sbjct: 90 SAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHASVVKLGLE 149
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
N +G T++ LY+K + E K +++ D++SW T I++ + + + L ++ +M
Sbjct: 150 LNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQLYVKM 209
Query: 294 SNDHGVRPDDFTFASILAACAGLA-SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
+ G+ P++FTF +L + L +GK +H+ LI + ++ + A++ MYAKC
Sbjct: 210 I-EAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLKTAIICMYAKCR 268
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
+ + K+ + +V W +II+ + A+ M+ +GI P++ T+ LL
Sbjct: 269 RMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELSGILPNNFTYASLLN 328
Query: 413 ACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
A + ++ GE F+S G+ DI L+D+
Sbjct: 329 ASSSVLSLELGEQ-FHSRVIMVGLEGDIYVGNALVDM 364
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 139/260 (53%), Gaps = 2/260 (0%)
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDL 267
L +C+ S L++G +H +K L+ + ++ N ++ LY+K +G+A F + +D+
Sbjct: 24 LSLCN-SQTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPHRDV 82
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHA 327
+SW T ++A + + + L +F +M G P++FT +S L +C+ L + G +IHA
Sbjct: 83 VSWTTLLSAHTRNKHHFEALQLF-DMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHA 141
Query: 328 HLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGS 387
++++ L + +G LV++Y KC +KL + +VVSW T+I++
Sbjct: 142 SVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSE 201
Query: 388 ALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLI 447
AL+L+ +M GI P+ TF+ LL + GL K +S T+G+ ++ T +I
Sbjct: 202 ALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLKTAII 261
Query: 448 DLLGRAGKLLEAEEYTKKFP 467
+ + ++ +A + +++ P
Sbjct: 262 CMYAKCRRMEDAIKVSQQTP 281
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 7/176 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S++S + + ++ G LH K G + VSN +++ Y+KCG M A +VF ++
Sbjct: 525 SLASFISAAAGLGIMETGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDI 584
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
+E + VSW+ +ISG G AL F M L P+ F S I AC+ L +G
Sbjct: 585 TEPDRVSWNGLISGLASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFACSQGSLLNQGL 644
Query: 121 QIHAYSLKFGYASISFVGN--SLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALI 173
+ YS++ Y + + L+ + + G +A+ ++ F+P+ V + L+
Sbjct: 645 D-YFYSMEKTYHITPKLDHYVCLVDLLGRGGRLEEAMGVIETMPFKPDSVIYKTLL 699
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 189/629 (30%), Positives = 316/629 (50%), Gaps = 77/629 (12%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
K+ SS+L C+ +K+L G +H+ + + D ++ +++LYA CG + R+VFD
Sbjct: 99 TKTYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFD 158
Query: 62 EMS---------------------------------------------------ERNLVS 70
M +R+++S
Sbjct: 159 TMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVIS 218
Query: 71 WSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAIS---ACAGIQSLVKGQQIHAYSL 127
W++MISG+ G LE + QM L + A+ IS CA +L G+ +H+ ++
Sbjct: 219 WNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAI 278
Query: 128 KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE 187
K + N+L+ MY K G AL V+ + E N+VS+ ++IAG+ + + +
Sbjct: 279 KSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIR 338
Query: 188 VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYS 247
+ + M ++G+ D + L C+ S L G +H +ESN FV N +M +Y+
Sbjct: 339 LLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYT 398
Query: 248 KFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFA 307
K + A F + KD+ISWNT I ++PD T A
Sbjct: 399 KCGSMDGANSVFSTMVVKDIISWNTMIGE----------------------LKPDSRTMA 436
Query: 308 SILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR 367
IL ACA L++++ GK+IH +++R + D V NALV++Y KCG++ + LF+ + +
Sbjct: 437 CILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSK 496
Query: 368 NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYF 427
++VSW +I+ + H G A+ F +M+ GI+PD V+FI +L AC+H+GL+++G +F
Sbjct: 497 DLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF 556
Query: 428 NSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRD 487
M+ + I P +EH+ C++DLL R G L +A E+ + P+ D + G LL CR+ D
Sbjct: 557 YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHD 616
Query: 488 VVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIE 547
+ + E++A+++F L+P T YVLL+N+YA W +V R+ + GL+K P S IE
Sbjct: 617 IELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIE 676
Query: 548 VQGTFEKFTVA-EFSHSKIGEINYMLKTL 575
++G F SH +I +LK +
Sbjct: 677 IKGKVNLFVSGNNSSHPHSKKIESLLKKM 705
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 147/347 (42%), Gaps = 53/347 (15%)
Query: 160 EAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRK 219
+ + +NA I F + E E+ + + L + +++ L++C+ S L
Sbjct: 60 RTIDRQVTDYNAKILHFCQLGNLENAMELVCMCQKSEL--ETKTYSSVLQLCAGSKSLTD 117
Query: 220 GMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSH 279
G +H + + + +G +++LY+ + E + F +E+K++ WN ++ +
Sbjct: 118 GKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAK 177
Query: 280 CADYEKGLSVFKEMSND--HGVRP------------------------------------ 301
D+++ + +FK M G RP
Sbjct: 178 IGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLE 237
Query: 302 ------------DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
D T S+L CA ++ GK +H+ I+ + + N L++MY+
Sbjct: 238 IYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYS 297
Query: 350 KCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
KCG + + ++F +M RNVVSW ++IA + A++L +QM+ G+K D V
Sbjct: 298 KCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTS 357
Query: 410 LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+L AC +G + G+ + + K + ++ L+D+ + G +
Sbjct: 358 ILHACARSGSLDNGKDVHDYI-KANNMESNLFVCNALMDMYTKCGSM 403
>gi|357162206|ref|XP_003579338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g20730-like [Brachypodium distachyon]
Length = 558
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 185/544 (34%), Positives = 303/544 (55%), Gaps = 7/544 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
SLL C ++G S+H ++ PD+ +S ++ YAK G + ARKVFD M R
Sbjct: 18 SLLQSC--MSCFRRGRSVHHQIIASAAPPDLHMSTKLVIFYAKHGDVAAARKVFDGMPHR 75
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
++VSW+AM+SG+ + G+ AL+ F+ M + PN++ + S SACAG + G+Q+H
Sbjct: 76 SVVSWTAMVSGYSRNGQTREALDLFTLMLASGVRPNQFTYGSVASACAGAGCVRSGEQVH 135
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A K + FV ++L+ M+++ G DA+ ++ E ++V++NAL+ G VE Q
Sbjct: 136 ACVAKGRFVGDVFVQSALMDMHLRCGSVVDAMQLFAEMERKDVVAWNALLRGLVERAQYG 195
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ MLR +LPD F+F L+ C + L ++H +K V +I+
Sbjct: 196 DALGLLPSMLRGAMLPDHFTFGSALKACGAVSVLANVELIHTCIIKLGYWGEKVVIGSII 255
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY-EKGLSVFKEMSNDHGVRPD 302
Y+K + A + I E DL+S I+ S ++ E + +F ++ + G+R D
Sbjct: 256 DAYAKCRGLSSARLIYDSICEPDLVSSTALISGYSMDRNHSEDAMELFCKI-HRKGLRID 314
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+S+L CA +AS++ G QIHA++ + + DV + NA+V+MYAK G + + + F+
Sbjct: 315 GVLLSSLLGLCANVASLRFGTQIHAYMCKRQPMTDVALDNAVVDMYAKAGEFADARRAFD 374
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
EM +RNVVSW ++I A + G A+ LF++M G+KP+ VTF+ LL+AC H+GL +
Sbjct: 375 EMPYRNVVSWTSLITACGKNGFGEDAVSLFDRMVEDGVKPNDVTFLSLLSACGHSGLTSK 434
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G YF SM YGI P EH++ IDLL R G+L +A + + + + + G +L AC
Sbjct: 435 GMEYFTSMMSKYGIDPRAEHYSSAIDLLARGGQLKDAWKLVQNIDIEPNSSMFGAMLGAC 494
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
+ + +GE AK LF + P ++ Y +L+N+YA +W D RK++ ++ K
Sbjct: 495 KTHGSMPLGETAAKNLFTIAPESSVHYAVLANMYAESSLWEDAQRTRKLMAETSGGKVAG 554
Query: 543 YSMI 546
S+I
Sbjct: 555 CSVI 558
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 4/222 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S L C L +H ++K+G + +V +++ YAKC + AR ++D +
Sbjct: 215 TFGSALKACGAVSVLANVELIHTCIIKLGYWGEKVVIGSIIDAYAKCRGLSSARLIYDSI 274
Query: 64 SERNLVSWSAMISGHHQAGEHLL-ALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
E +LVS +A+ISG+ H A+E F ++H L + + +S + CA + SL G
Sbjct: 275 CEPDLVSSTALISGYSMDRNHSEDAMELFCKIHRKGLRIDGVLLSSLLGLCANVASLRFG 334
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
QIHAY K + + N+++ MY K G +DA + E N+VS+ +LI +N
Sbjct: 335 TQIHAYMCKRQPMTDVALDNAVVDMYAKAGEFADARRAFDEMPYRNVVSWTSLITACGKN 394
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
E +F M+ G+ P+ +F L C S KGM
Sbjct: 395 GFGEDAVSLFDRMVEDGVKPNDVTFLSLLSACGHSGLTSKGM 436
>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g35130, chloroplastic; Flags: Precursor
gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 804
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 191/565 (33%), Positives = 315/565 (55%), Gaps = 10/565 (1%)
Query: 17 ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMIS 76
+L++G +HA V+K+G DV V N +++LY K G A KVF+EM ER++VSW++MIS
Sbjct: 145 SLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMIS 204
Query: 77 GHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYAS 133
G+ G+ +L F +M P+ + SA+ AC+ + S G++IH ++++ +
Sbjct: 205 GYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIET 264
Query: 134 IS-FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM 192
V S++ MY K G S A ++ + N+V++N +I + N + F F+ M
Sbjct: 265 GDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKM 324
Query: 193 LRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
Q GL PD + L ++ + +G +H ++ + + ++ +Y +
Sbjct: 325 SEQNGLQPDVITSINLLP----ASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQ 380
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ AE F + EK++ISWN+ IAA L +F+E+ D + PD T ASIL
Sbjct: 381 LKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELW-DSSLVPDSTTIASILP 439
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
A A S+ G++IHA++++ R + + N+LV+MYA CG + + K FN +L ++VVS
Sbjct: 440 AYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVS 499
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
WN+II A+A H G ++ LF +M A+ + P+ TF LL AC+ +G+V EG YF SM+
Sbjct: 500 WNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMK 559
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
+ YGI P IEH+ C++DL+GR G A+ + ++ P + G+LL+A R +D+ I
Sbjct: 560 REYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIA 619
Query: 492 ERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGT 551
E A+Q+F ++ T YVLL N+YA G W DV + +++ G+ + S S +E +G
Sbjct: 620 EFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGK 679
Query: 552 FEKFTVAEFSHSKIGEINYMLKTLS 576
FT + SH +I +L +S
Sbjct: 680 SHVFTNGDRSHVATNKIYEVLDVVS 704
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 212/373 (56%), Gaps = 8/373 (2%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAG 112
A ++FDEM++ + W+ MI G G ++ A++F+S+M + + + + I + AG
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
I SL +G++IHA +K G+ S +V NSLIS+YMK+G + DA V+ E E ++VS+N++
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 173 IAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
I+G++ +FK ML+ G PDRFS L CS + G +HC V+ ++
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 233 ES-NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK 291
E+ + V +I+ +YSK+ + AE+ F + ++++++WN I + F+
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQ 322
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
+MS +G++PD T ++L A A + G+ IH + +R + + AL++MY +C
Sbjct: 323 KMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMYGEC 378
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
G + + +F+ M +NV+SWN+IIAA+ + SAL+LF+++ + + PDS T +L
Sbjct: 379 GQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASIL 438
Query: 412 TACNHAGLVKEGE 424
A + + EG
Sbjct: 439 PAYAESLSLSEGR 451
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 165/310 (53%), Gaps = 8/310 (2%)
Query: 153 DALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
DAL ++ E + + +N +I GF + + + M+ G+ D F++ ++ +
Sbjct: 82 DALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVA 141
Query: 213 VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNT 272
+ L +G +H + +K S+ +V N++++LY K +AEK F + E+D++SWN+
Sbjct: 142 GISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNS 201
Query: 273 FIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
I+ D L +FKEM G +PD F+ S L AC+ + S + GK+IH H +R
Sbjct: 202 MISGYLALGDGFSSLMLFKEMLK-CGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRS 260
Query: 333 RLNQ-DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
R+ DV V ++++MY+K G +S + ++FN M+ RN+V+WN +I +A + A
Sbjct: 261 RIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLC 320
Query: 392 FEQM-KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLL 450
F++M + G++PD +T I LL A + EG + G P + T LID+
Sbjct: 321 FQKMSEQNGLQPDVITSINLLP----ASAILEGRT-IHGYAMRRGFLPHMVLETALIDMY 375
Query: 451 GRAGKLLEAE 460
G G+L AE
Sbjct: 376 GECGQLKSAE 385
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 134/271 (49%), Gaps = 7/271 (2%)
Query: 246 YSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFT 305
++ L+ +A + F + + D WN I + C Y + + + M GV+ D FT
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVF-AGVKADTFT 132
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
+ ++ + AG++S++ GK+IHA +I++ DV V N+L+++Y K G + K+F EM
Sbjct: 133 YPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP 192
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
R++VSWN++I+ + G S+L LF++M G KPD + + L AC+H K G+
Sbjct: 193 ERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKE 252
Query: 426 YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLR 485
++ + D+ T ++D+ + G++ AE + Q IV ++ C R
Sbjct: 253 IHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFN--GMIQRNIVAWNVMIGCYAR 310
Query: 486 RDVVIGERLAKQLFH----LQPTTTSPYVLL 512
V L Q LQP + LL
Sbjct: 311 NGRVTDAFLCFQKMSEQNGLQPDVITSINLL 341
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ +I+S+L +++ +L +G +HA ++K + I+ N ++++YA CG + ARK F+
Sbjct: 431 STTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFN 490
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
+ +++VSW+++I + G +++ FS+M + PN+ FAS ++AC+
Sbjct: 491 HILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACS 543
>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 753
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 187/579 (32%), Positives = 309/579 (53%), Gaps = 5/579 (0%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+S L C AL G H + +M + + N +L +Y C A + FD+
Sbjct: 81 RSYEYLFKMCGTLGALSDGKLFHNRLQRMA-NSNKFIDNCILQMYCDCKSFTAAERFFDK 139
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
+ +R+L SW+ +IS + + G A+ F +M ++PN IF++ I + A L G
Sbjct: 140 IVDRDLSSWATIISAYTEEGRIDEAVGLFLRMLDLGIIPNFSIFSTLIMSFADPSMLDLG 199
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+QIH+ ++ +A+ + + +MY+K G+ A + + + V+ L+ G+ +
Sbjct: 200 KQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMVGYTQA 259
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ +F M+ +G+ D F F+ L+ C+ DL G +H +K LES VG
Sbjct: 260 ARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVG 319
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ Y K A +AF I E + SW+ IA +++ L VFK + + GV
Sbjct: 320 TPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIRS-KGV 378
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+ F + +I AC+ ++ + G QIHA I+ L + +A++ MY+KCG + +++
Sbjct: 379 LLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVDYAHQ 438
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
F + + V+W II AHA H AL+LF++M+ +G++P+ VTFIGLL AC+H+GL
Sbjct: 439 AFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACSHSGL 498
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
VKEG+ + +SM YG++P I+H+ C+ID+ RAG LLEA E + P D + +LL
Sbjct: 499 VKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLL 558
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
C RR++ IG A +F L P ++ YV++ NLYA G W + A RKM+ + L+K
Sbjct: 559 GGCWSRRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRK 618
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSLA 578
E S S I V+G +F V + H + +I LK L+++
Sbjct: 619 EVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKELNVS 657
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 205/600 (34%), Positives = 317/600 (52%), Gaps = 49/600 (8%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKC-GKMILARKVFDEMSERNLVSWSAMISGHH 79
G+ +H + K DV+V N ++++Y C AR VFD + RN +SW+++IS +
Sbjct: 221 GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYS 280
Query: 80 QAGEHLLALEFFSQMH-------LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYA 132
+ G+ + A + FS M PN+ ++ + KG+++HA+ ++ G
Sbjct: 281 RRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLE----EGRRKGREVHAHVIRTGLN 336
Query: 133 SISF-VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKL 191
+GN L++MY K G +DA V+ E + VS+N+LI+G +N+ E E+F L
Sbjct: 337 DNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSL 396
Query: 192 M--------------------------------LRQGLLPDRFSFAGGLEICSVSNDLRK 219
M +R G R +F L S +
Sbjct: 397 MPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEV 456
Query: 220 GMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAACS 278
+H L +K L + +GN +++ Y K + E EK F R+ E +D +SWN+ I+
Sbjct: 457 SHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYI 516
Query: 279 HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
H K + + M G R D FTFA+IL+ACA +A+++ G ++HA IR L DV
Sbjct: 517 HNELLHKAMDLVWFMMQ-KGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDV 575
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
VG+ALV+MY+KCG I + + F M RNV SWN++I+ +A H G ALKLF +M
Sbjct: 576 VVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLD 635
Query: 399 GIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLE 458
G PD VTF+G+L+AC+H G V+EG +F SM + Y +SP +EHF+C++DLLGRAGKL E
Sbjct: 636 GQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDE 695
Query: 459 AEEYTKKFPLGQDPIVLGTLLSAC-RLR-RDVVIGERLAKQLFHLQPTTTSPYVLLSNLY 516
++ P+ + ++ T+L AC R R+ +G R A+ L L+P YVLL+N+Y
Sbjct: 696 VGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMY 755
Query: 517 ASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
AS W DVA AR +K++ +KKE S + ++ F + H + I L+ L+
Sbjct: 756 ASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELN 815
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 148/510 (29%), Positives = 246/510 (48%), Gaps = 48/510 (9%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+++ SL++ + ++ LH +K G ++ +SN ++N+Y + G + A+K+FD
Sbjct: 99 SETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFD 158
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISAC--AGIQSL 116
EMS RNLV+W+ +ISG+ Q G+ A F M +PN Y F SA+ AC +G
Sbjct: 159 EMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGC 218
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMK-VGYSSDALLVYGEAFEPNLVSFNALIAG 175
G QIH K Y S V N LISMY + ++DA V+ N +S+N++I+
Sbjct: 219 KLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISV 278
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGG---LEICSVSNDLRKGMILHCLTVKCKL 232
+ +++F M ++GL FSF E + RKG +H ++ L
Sbjct: 279 YSRRGDAVSAYDLFSSMQKEGL---GFSFKPNDAFSEFSVLEEGRRKGREVHAHVIRTGL 335
Query: 233 ESNPF-VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA-----CSHCA----- 281
N +GN ++ +Y+K I +A F L+ EKD +SWN+ I+ CS A
Sbjct: 336 NDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFS 395
Query: 282 -----DYEKGLSVFKEMSNDH----------------GVRPDDFTFASILAACAGLASVQ 320
D SV +S+ G TF +IL+A + L+ +
Sbjct: 396 LMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHE 455
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH-RNVVSWNTIIAAH 379
QIHA +++ L+ D +GNAL++ Y KCG ++ K+F M R+ VSWN++I+ +
Sbjct: 456 VSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGY 515
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG-EAYFNSMEKTYGISP 438
++ L A+ L M G + DS TF +L+AC ++ G E + + +
Sbjct: 516 IHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRAC--LES 573
Query: 439 DIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
D+ + L+D+ + G++ A + + PL
Sbjct: 574 DVVVGSALVDMYSKCGRIDYASRFFELMPL 603
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 203/426 (47%), Gaps = 46/426 (10%)
Query: 96 LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL 155
L + F S I+ G + +++H S+K+G+ F+ N+LI++Y+++G A
Sbjct: 95 LFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQ 154
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVS- 214
++ E NLV++ LI+G+ +N +P++ F+ M+R G +P+ ++F L C S
Sbjct: 155 KLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 214
Query: 215 -NDLRKGMILHCLTVKCKLESNPFVGNTIMALY-SKFNLIGEAEKAFRLIEEKDLISWNT 272
+ + G+ +H L K + S+ V N ++++Y S + +A F I ++ ISWN+
Sbjct: 215 PSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNS 274
Query: 273 FIAACSHCADYEKGLSVFKEMSND---HGVRPDD-FTFASILAACAGLASVQHGKQIHAH 328
I+ S D +F M + +P+D F+ S+L + G+++HAH
Sbjct: 275 IISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLE-----EGRRKGREVHAH 329
Query: 329 LIRMRLNQD-VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA--------- 378
+IR LN + V +GN LVNMYAK G I+ + +F M+ ++ VSWN++I+
Sbjct: 330 VIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSED 389
Query: 379 --------------HANHRLGG---------SALKLFEQMKATGIKPDSVTFIGLLTACN 415
N +G A+K F QM G VTFI +L+A +
Sbjct: 390 AAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVS 449
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
L E +++ Y +S D L+ G+ G++ E E+ + +D +
Sbjct: 450 SLSL-HEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSW 508
Query: 476 GTLLSA 481
+++S
Sbjct: 509 NSMISG 514
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 74/119 (62%), Gaps = 3/119 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +++L C+ L++G+ +HA ++ ++ DV+V + ++++Y+KCG++ A + F+ M
Sbjct: 542 TFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELM 601
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKG 119
RN+ SW++MISG+ + G AL+ F++M L P+ F +SAC+ + + +G
Sbjct: 602 PLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEG 660
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 189/562 (33%), Positives = 303/562 (53%), Gaps = 6/562 (1%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C ++ G +H + MG + DV V + ++ Y++ G + AR +FD M ++ V W
Sbjct: 157 CGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLW 216
Query: 72 SAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
+ M++G+ + G+ A F +M PN FA +S CA + G Q+H +
Sbjct: 217 NVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVS 276
Query: 129 FGYASISFVGNS--LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
G S V N+ LI +Y K A ++ + ++V A+I+G+V N
Sbjct: 277 SGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNAL 336
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
E+F+ +L++ + + + A L C+ L G LH +K + +VG+ IM +Y
Sbjct: 337 EIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMY 396
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
+K + A + F I +KD + WN+ I +CS E+ + +F++M G + D +
Sbjct: 397 AKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMA-GTKYDCVSI 455
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
++ L+ACA L ++ +GK+IHA ++R D+ +AL++MY+KCG + + ++F+ M
Sbjct: 456 SAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEE 515
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
+N VSWN+IIAA+ NH +L LF M GI+PD VTF+ +++AC HAG V EG Y
Sbjct: 516 KNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHY 575
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRR 486
F M + GI +EH+ C++DL GRAG+L EA P D V GTLL ACRL
Sbjct: 576 FRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHG 635
Query: 487 DVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMI 546
+V + E ++ LF L P + YVLLSN++A+ G W V R ++K+ G++K P S I
Sbjct: 636 NVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWI 695
Query: 547 EVQGTFEKFTVAEFSHSKIGEI 568
+V T F A+ SH + +I
Sbjct: 696 DVNNTTHMFVAADRSHPQSSQI 717
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 222/461 (48%), Gaps = 7/461 (1%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
+A + S+L C+ L QG HA +L GI + I+ +L +Y CG + A+ +F
Sbjct: 45 LAPQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIF 104
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLV 117
++ W+ MI G G+ AL F+ +M LP++Y F I AC G+ S+
Sbjct: 105 YQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVA 164
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+ +H G+ FVG+SLI Y + G DA ++ + V +N ++ G+V
Sbjct: 165 LGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYV 224
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+N + VF M R P+ +FA L +C+ + G LH L V LE +
Sbjct: 225 KNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSP 284
Query: 238 VGNT--IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
V NT ++ +Y K + A K F D++ I+ L +F+ +
Sbjct: 285 VANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQ 344
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
+ +R + T AS+L ACAGLA++ GK++H H+++ VG+A+++MYAKCG +
Sbjct: 345 ER-MRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLD 403
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+++ F + ++ V WN++I + + + A+ LF QM G K D V+ L+AC
Sbjct: 404 LAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACA 463
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+ + G+ M + D+ + LID+ + G L
Sbjct: 464 NLPALHYGKEIHAFMMRG-AFRSDLFAESALIDMYSKCGNL 503
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
SIS+ L C+ AL G +HA +++ + D+ + ++++Y+KCG + LA +VFD M
Sbjct: 454 SISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTM 513
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
E+N VSW+++I+ + G +L F M + P+ F + ISAC
Sbjct: 514 EEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACG 564
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 176/443 (39%), Positives = 268/443 (60%), Gaps = 12/443 (2%)
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
F+ N LI+MY+K G DA V+ + + N+VS+ +I+ + + +K E LMLR+
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
G+ P+ F+++ L C +LR+ LHC +K L+S+ FV + ++ +YS++ GE
Sbjct: 61 GVRPNMFTYSSVLRACDGLFNLRQ---LHCCIIKIGLDSDVFVRSALIDVYSRW---GEL 114
Query: 256 EKAFRLIEEK---DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
E A R+ +E DL+ W++ IA + +D ++ L +FK M G T S+L A
Sbjct: 115 ENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKR-AGFLAQQTTLTSVLRA 173
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
C GLA ++ G+Q+H H+ ++ +QD+ + NAL++MY KCG + + +F M+ ++V+SW
Sbjct: 174 CTGLALLELGRQVHVHV--LKYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISW 231
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
+T+IA A + ALKLFE MK GIKP+ VT +G+L AC+HAGLV+EG YF+SM++
Sbjct: 232 STMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKE 291
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGE 492
+GI P EH+ C+IDLLGRAG+L EA + + D + LL+ACR+ R+V +
Sbjct: 292 LFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAI 351
Query: 493 RLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTF 552
AKQ+ L P YVLLSN+YA+ W DVA R+ + + G+KKEP S IEV
Sbjct: 352 HAAKQILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQI 411
Query: 553 EKFTVAEFSHSKIGEINYMLKTL 575
F + + SH +I EIN L L
Sbjct: 412 HAFILGDRSHPQIREINIQLNQL 434
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 182/349 (52%), Gaps = 13/349 (3%)
Query: 41 NHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLL 97
N ++N+Y K G + A+ VFD+M +RN+VSW+ MIS + A + ALEF M +
Sbjct: 4 NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVR 63
Query: 98 PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV 157
PN + ++S + AC G+ +L +Q+H +K G S FV ++LI +Y + G +AL V
Sbjct: 64 PNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRV 120
Query: 158 YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDL 217
+ E +LV ++++IAGF +N ++ +FK M R G L + + L C+ L
Sbjct: 121 FDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALL 180
Query: 218 RKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC 277
G +H + K + + + N ++ +Y K + +A F + EKD+ISW+T IA
Sbjct: 181 ELGRQVHVHVL--KYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGL 238
Query: 278 SHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD 337
+ ++ L +F+ M G++P+ T +L AC+ V+ G + H ++ D
Sbjct: 239 AQNGYSKEALKLFESMKV-LGIKPNYVTIVGVLFACSHAGLVEEG-LYYFHSMKELFGID 296
Query: 338 VGVGN--ALVNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAAHANHR 383
G + ++++ + G +S + L NEM + V+W ++ A HR
Sbjct: 297 PGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHR 345
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 142/279 (50%), Gaps = 10/279 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+L C L+Q LH ++K+G+ DV V + ++++Y++ G++ A +VFDEM
Sbjct: 68 TYSSVLRACDGLFNLRQ---LHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEM 124
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+LV WS++I+G Q + AL F +M L + S + AC G+ L G+
Sbjct: 125 VTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGR 184
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H + LK+ I + N+L+ MY K G DA V+ E +++S++ +IAG +N
Sbjct: 185 QVHVHVLKYDQDLI--LNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNG 242
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVG 239
++ ++F+ M G+ P+ + G L CS + + +G+ H + ++
Sbjct: 243 YSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHY 302
Query: 240 NTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAAC 277
++ L + + EA +E E D ++W + AC
Sbjct: 303 GCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNAC 341
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 192/584 (32%), Positives = 323/584 (55%), Gaps = 16/584 (2%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
++ S + CS + L G +H V+KM Q D V +L +YAK G + A+KVF
Sbjct: 648 VSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVF 707
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL--LP-NEYIFASAISACAGIQSLV 117
D++ ++ + +AMIS G AL +++M P + + +S +S C+ + S
Sbjct: 708 DQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYD 767
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+ +HA +K S + ++L++MY K G + DA V+ E ++V++ ++IAGF
Sbjct: 768 FGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFC 827
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDR------FSFAGGLEICSVSNDLRKGMILHCLTVKCK 231
+N++ + ++F+ M ++G+ D S GLE ++ G ++H +K
Sbjct: 828 QNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLE------NVELGHLIHGFAIKRG 881
Query: 232 LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK 291
LES+ FV +++ +YSKF AE F + K+L++WN+ I+ S E +++
Sbjct: 882 LESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLP 941
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
++ HG D + ++L A + +A++ GK +HA+ IR+++ D+ V NAL++MY KC
Sbjct: 942 QILQ-HGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKC 1000
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
G + + +F M RN+V+WN++IA + +H A++LF++MK + PD VTF+ L+
Sbjct: 1001 GCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALI 1060
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQD 471
T+C+H+G+V+EG F M YG+ P +EH+ ++DLLGRAG+L +A + + P+ D
Sbjct: 1061 TSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDAD 1120
Query: 472 PIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKM 531
V LL ACR R++ +GE +A L ++P S YV L NLY MW A R
Sbjct: 1121 RSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRAS 1180
Query: 532 LKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+K GLKK P S IEV+ + F + S ++ EI L +L
Sbjct: 1181 MKGRGLKKSPGCSWIEVKNRVDVFFSGDSSSTRRIEIYKTLSSL 1224
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 215/420 (51%), Gaps = 12/420 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SLL C+ L G ++HA+++ MG+Q D ++ ++N+Y KCG + A +VFD+M
Sbjct: 443 TFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKM 502
Query: 64 SER-----NLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQS 115
SE ++ W+ +I G+ + G L F +M L P+ Y + + C +
Sbjct: 503 SESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSW 562
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGE-AFEPNLVSFNALIA 174
+ G+QIH Y ++ + ++ +LI MY +A ++G+ N+V++N +I
Sbjct: 563 YMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIG 622
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
GFVEN EK E++ L + SF G CS L G +HC +K +
Sbjct: 623 GFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQD 682
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
+P+V +++ +Y+K + +A+K F + +K++ N I+A L ++ +M
Sbjct: 683 DPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMK 742
Query: 295 NDHGVRP-DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
G P D FT +S+L+ C+ + S G+ +HA +I+ + +V + +AL+ MY KCG
Sbjct: 743 --AGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGS 800
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ +F M R+VV+W ++IA +R AL LF M+ G+K DS +++A
Sbjct: 801 TEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISA 860
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 235/472 (49%), Gaps = 14/472 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+S +L C++ G +H +++ + D + ++ +Y+ C + + A +F ++
Sbjct: 549 SLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKL 608
Query: 64 SER-NLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYI------FASAISACAGIQSL 116
R N+V+W+ MI G + G +LE +S L NE F A +AC+ + L
Sbjct: 609 ENRSNIVAWNVMIGGFVENGMWEKSLELYS---LAKNENCKLVSASFTGAFTACSHGEVL 665
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G+Q+H +K + +V SL++MY K G DA V+ + + + NA+I+ F
Sbjct: 666 DFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAF 725
Query: 177 VENQQPEKGFEVFKLMLRQGLLP-DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+ N + ++ M + G P D F+ + L CSV G +H +K ++SN
Sbjct: 726 IGNGRAYDALGLYNKM-KAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSN 784
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
+ + ++ +Y K +A+ F ++E+D+++W + IA ++ L +F+ M
Sbjct: 785 VAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEK 844
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
+ GV+ D S+++A GL +V+ G IH I+ L DV V +LV+MY+K G
Sbjct: 845 E-GVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAE 903
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ +F+ M ++N+V+WN++I+ ++ + L ++ L Q+ G DSV+ +L A +
Sbjct: 904 SAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVS 963
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+ +G+ ++ + I D++ LID+ + G L A+ + P
Sbjct: 964 SVAALLKGKT-LHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMP 1014
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 200/424 (47%), Gaps = 27/424 (6%)
Query: 80 QAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF 136
Q G++ ALE S+ L ++ F S + CA + +L G+ IHA + G S +
Sbjct: 418 QQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPY 477
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFE-----PNLVSFNALIAGFVENQQPEKGFEVFKL 191
+ SLI+MY+K G AL V+ + E P++ +N +I G+ + E+G F
Sbjct: 478 IATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCR 537
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
M G+ PD +S + L IC+ + G +H ++ E +P++ ++ +YS +
Sbjct: 538 MQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSR 597
Query: 252 IGEAEKAFRLIEEK-DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
EA F +E + ++++WN I +EK L ++ ++ + + +F
Sbjct: 598 PMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYS-LAKNENCKLVSASFTGAF 656
Query: 311 AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVV 370
AC+ + G+Q+H +I+M D V +L+ MYAK G + + K+F+++L + V
Sbjct: 657 TACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVE 716
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG-----EA 425
N +I+A + AL L+ +MKA DS T LL+ C+ G G E
Sbjct: 717 LRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEV 776
Query: 426 YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE--YTKKFPLGQDPIVLGTLLSA-C 482
SM+ I + L+ + + G +A+ YT K +D + G++++ C
Sbjct: 777 IKRSMQSNVAIQ------SALLTMYYKCGSTEDADSVFYTMK---ERDVVAWGSMIAGFC 827
Query: 483 RLRR 486
+ RR
Sbjct: 828 QNRR 831
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 146/296 (49%), Gaps = 10/296 (3%)
Query: 173 IAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
I V+ + + E+ L +F+F L+ C+ ++L G +H V L
Sbjct: 413 IKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGL 472
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK-----DLISWNTFIAACSHCADYEKGL 287
+S+P++ +++ +Y K L+G A + F + E D+ WN I +E+GL
Sbjct: 473 QSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGL 532
Query: 288 SVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNM 347
+ F M + G+RPD ++ + +L C L+ G+QIH ++IR D + AL+ M
Sbjct: 533 AQFCRM-QELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGM 591
Query: 348 YAKCGLISCSYKLFNEMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVT 406
Y+ C ++ LF ++ +R N+V+WN +I + + +L+L+ K K S +
Sbjct: 592 YSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSAS 651
Query: 407 FIGLLTACNHAGLVKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
F G TAC+H ++ G + + + ++ + P + T L+ + ++G + +A++
Sbjct: 652 FTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYV--CTSLLTMYAKSGSVEDAKK 705
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 183/539 (33%), Positives = 299/539 (55%), Gaps = 6/539 (1%)
Query: 43 VLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PN 99
+L+ Y++ G + RK FDEM ++VSW+A+I+ + + FF M L P
Sbjct: 1 MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60
Query: 100 EYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG 159
E + +SAC + + G+ I L G S V +L+SMY K+G+ +DA V+
Sbjct: 61 EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120
Query: 160 EAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRK 219
++V+++A++A + N P + +F+ M G+ P++ + GL+ C+ DLR
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 180
Query: 220 GMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSH 279
G ++H ++S VG ++ LY K I A +AF I EK++++W+ AA +
Sbjct: 181 GALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYAR 240
Query: 280 CADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH--AHLIRMRLNQD 337
+ V M + G+ P+ TF S+L ACA +A+++ G++IH ++ L D
Sbjct: 241 NDRNRDAIRVLHRMDLE-GLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESD 299
Query: 338 VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA 397
V V ALVNMY+KCG ++ + +F+++ H ++V WN++IA +A H AL+LFE+M+
Sbjct: 300 VYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRL 359
Query: 398 TGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLL 457
G++P +TF +L AC+HAG++ +G +F S +GI P+ EHF C++DLLGRAG ++
Sbjct: 360 EGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIV 419
Query: 458 EAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYA 517
++E+ P P+ L ACR R++ A+ LF L P +PYVLLSN+YA
Sbjct: 420 DSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMYA 479
Query: 518 SDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
G W DVA R+ ++ KE S IEV+ +F + H +IGEI+ L+ L+
Sbjct: 480 KAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLT 538
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 165/325 (50%), Gaps = 6/325 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
IS L C+ + + G S+ A+L GI+ + IV ++++Y K G A VF MS
Sbjct: 64 ISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMS 123
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQ 121
R++V+WSAM++ + + G AL F QM L PN+ S + ACA + L G
Sbjct: 124 HRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGAL 183
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H G S VG +L+++Y K G A+ +G+ E N+V+++A+ A + N +
Sbjct: 184 MHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDR 243
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLT--VKCKLESNPFVG 239
V M +GL+P+ +F L+ C+ L++G +H T + LES+ +V
Sbjct: 244 NRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVL 303
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ +YSK + A F I DL+ WN+ IA + EK L +F+ M + G+
Sbjct: 304 TALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLE-GL 362
Query: 300 RPDDFTFASILAACAGLASVQHGKQ 324
+P TF S+L AC+ + G++
Sbjct: 363 QPTIITFTSVLFACSHAGMLDQGRK 387
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 121/222 (54%), Gaps = 5/222 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S L C+ L+ G +H V GIQ V+V ++NLY KCG++ A + F ++
Sbjct: 164 TLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQI 223
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
E+N+V+WSA+ + + + + A+ +M L+PN F S + ACA I +L +G+
Sbjct: 224 VEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGR 283
Query: 121 QIHAYS--LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+IH + L G S +V +L++MY K G + A ++ + +LV +N+LIA +
Sbjct: 284 RIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQ 343
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKG 220
+ Q EK E+F+ M +GL P +F L CS + L +G
Sbjct: 344 HGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQG 385
>gi|302823459|ref|XP_002993382.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
gi|300138813|gb|EFJ05567.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
Length = 655
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 182/548 (33%), Positives = 296/548 (54%), Gaps = 12/548 (2%)
Query: 34 QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQ 93
+ + + N ++ Y +C + A F E++E+N S++ M+ + + H AL+ F +
Sbjct: 14 EKETFLGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFKK 73
Query: 94 M---HLLPNEYIFASAISACA--GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKV 148
L N+ + + + +CA G L G++IH +++ G+ + V NSLI MY K
Sbjct: 74 SINEELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKC 133
Query: 149 GYSSDALLVYGEAFEP-NLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGG 207
G A V+ E EP NL+S+ ++I + + + +E++K ML +G++PD +++A
Sbjct: 134 GSFKFAAGVF-EKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAA 192
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDL 267
L +C +R+G +H + + P N ++ +Y +F I A+ F I KDL
Sbjct: 193 LAVCPT---IREGEAIH-VKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYKDL 248
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHA 327
S+N IA + D K +S++ EM + P+ +TF S+L AC+ L ++ GK+IH
Sbjct: 249 ASYNNMIAVFAKYDDGSKAISLYIEMEG-RNLEPNLWTFTSVLDACSKLGALTEGKEIHK 307
Query: 328 HLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGS 387
+ DV ALVNMYAKCG + +FN+ +NV +W ++++A++
Sbjct: 308 KVKGGDQPTDVAYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQY 367
Query: 388 ALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLI 447
L+ +++M G+ PD VTF + AC+H+GL EG YF +M + + I P H+TC+I
Sbjct: 368 RLEAYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHYTCMI 427
Query: 448 DLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTS 507
DLLGR G+L EAEE + P D + LLSAC++ D+ IG R K++ L P +
Sbjct: 428 DLLGRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKIGARAYKRITELNPPDSG 487
Query: 508 PYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGE 567
PY+L+ N+YA G W DVA +KM+K GL K P SMIE Q +F + +H E
Sbjct: 488 PYLLMGNMYAKAGKWADVAEVKKMIKQRGLAKPPGKSMIEAQRRIHEFVCGDTAHPLNQE 547
Query: 568 INYMLKTL 575
I L+ +
Sbjct: 548 IRARLQEV 555
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 195/408 (47%), Gaps = 35/408 (8%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L+ G +H + G D++V N ++++YAKCG A VF++M +NL+S+++MI
Sbjct: 101 LEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSFKFAAGVFEKMEPKNLISYTSMIQA 160
Query: 78 HHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFG--YA 132
+ +H+ A E + +M ++P+ Y +A+A++ C I+ +G+ IH +K G
Sbjct: 161 YTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAVCPTIR---EGEAIH---VKLGNHER 214
Query: 133 SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM 192
N+L+ MY + G + A V+ +L S+N +IA F + K ++ M
Sbjct: 215 RTPVCSNALVGMYGRFGRIASAKWVFDGIRYKDLASYNNMIAVFAKYDDGSKAISLYIEM 274
Query: 193 LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT-IMALYSKFNL 251
+ L P+ ++F L+ CS L +G +H VK + NT ++ +Y+K
Sbjct: 275 EGRNLEPNLWTFTSVLDACSKLGALTEGKEIH-KKVKGGDQPTDVAYNTALVNMYAKCGS 333
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
EA F K++ +W + ++A S + L ++ M N GV PDD TF +I
Sbjct: 334 THEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYRLEAYQRM-NCEGVIPDDVTFTAIFN 392
Query: 312 ACAGLASVQHGKQIHAHLIRMR-LNQDVGV------GNALVNMYAKCGLISCSYKLFNEM 364
AC+ G L+ R + +D + ++++ + G + + +L M
Sbjct: 393 ACSHSGLPDEG------LLYFRAMREDHWIVPLQPHYTCMIDLLGRVGRLREAEELVRTM 446
Query: 365 LHR-NVVSWNTIIAA---HANHRLGGSALKLFEQMKATGIKPDSVTFI 408
+ +VV+W +++A + + ++G A K ++ PDS ++
Sbjct: 447 PYSPDVVTWTILLSACKVYGDLKIGARAYKRITELNP----PDSGPYL 490
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 68/112 (60%), Gaps = 5/112 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQP-DVIVSNHVLNLYAKCGKMILARKVFDE 62
+ +S+L CSK AL +G +H V K G QP DV + ++N+YAKCG AR VF++
Sbjct: 285 TFTSVLDACSKLGALTEGKEIHKKV-KGGDQPTDVAYNTALVNMYAKCGSTHEARAVFND 343
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
+N+ +W++++S + Q G+ LE + +M+ ++P++ F + +AC+
Sbjct: 344 CGLKNVFTWTSLMSAYSQPGQSQYRLEAYQRMNCEGVIPDDVTFTAIFNACS 395
>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 701
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 192/578 (33%), Positives = 315/578 (54%), Gaps = 7/578 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++S L CS + L+ G +H LK I D+ V + ++ LY+KCG+M A KVF E
Sbjct: 107 TVSIALKSCSGLQKLELGKMIHG-FLKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEY 165
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISACAGIQSLVKG 119
+ ++V W+++I+G+ Q G LAL FFS+M +L P+ SA SACA + G
Sbjct: 166 PKPDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLG 225
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ +H + + G+ + + NS++++Y K G A ++ E +++S+++++A + +N
Sbjct: 226 RSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADN 285
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+F M+ + + +R + L C+ S++L +G +H L V E + V
Sbjct: 286 GAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVS 345
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+M +Y K A + F + +KD++SW + + K L VF M ++ G
Sbjct: 346 TALMDMYLKCFSPENAIELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSN-GT 404
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
RPD ILAA + L VQ +HA + + + + +G +L+ +YAKC I + K
Sbjct: 405 RPDAIALVKILAASSELGIVQQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANK 464
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA-TGIKPDSVTFIGLLTACNHAG 418
+F + H +VV+W++IIAA+ H G ALKL QM + +KP+ VTF+ +L+AC+HAG
Sbjct: 465 VFKGLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAG 524
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
L++EG F+ M Y + P+IEH+ ++DLLGR G+L +A + P+ P V G L
Sbjct: 525 LIEEGIKMFHVMVNEYQLMPNIEHYGIMVDLLGRMGELDKALDMINNMPMQAGPHVWGAL 584
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L ACR+ +++ IGE A LF L P Y LLSN+Y D W D A R ++K++ LK
Sbjct: 585 LGACRIHQNIKIGELAALNLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRLK 644
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
K SM+E++ F ++ H + +I ML+ L
Sbjct: 645 KIVGQSMVEIKNEVHSFIASDRFHGESDQIYEMLRKLD 682
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 215/419 (51%), Gaps = 13/419 (3%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
CSK Q LH+ LK+G+ D V + LYA+ + A K+F+E + + W
Sbjct: 15 CSKISITQ----LHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLW 70
Query: 72 SAMISGHHQAGEHLLALEFFSQMHL------LPNEYIFASAISACAGIQSLVKGQQIHAY 125
+A++ + G+ + L F QM+ P+ Y + A+ +C+G+Q L G+ IH +
Sbjct: 71 NALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHGF 130
Query: 126 SLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKG 185
LK S FVG++LI +Y K G +DA+ V+ E +P++V + ++I G+ +N PE
Sbjct: 131 -LKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPELA 189
Query: 186 FEVF-KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
F ++++ + + PD + C+ +D G +H + ++ + N+I+
Sbjct: 190 LAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILN 249
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
LY K I A FR + KD+ISW++ +A + L++F EM D + +
Sbjct: 250 LYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMI-DKRIELNRV 308
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T S L ACA ++++ GKQIH + D+ V AL++MY KC + +LFN M
Sbjct: 309 TVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRM 368
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
++VVSW + + +A + +L +F M + G +PD++ + +L A + G+V++
Sbjct: 369 PKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQA 427
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++ +L S+ +QQ + LHA V K G + + ++ LYAKC + A KVF
Sbjct: 408 AIALVKILAASSELGIVQQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFK 467
Query: 62 EMSERNLVSWSAMIS--GHHQAGEHLLALEFFSQMH--LLPNEYIFASAISACA 111
+ ++V+WS++I+ G H GE L L H + PN+ F S +SAC+
Sbjct: 468 GLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACS 521
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 189/566 (33%), Positives = 314/566 (55%), Gaps = 6/566 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+LL C+ + ++ HA ++K+G + V N +L+ Y K G + AR++F EM
Sbjct: 145 TLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGW 204
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIH 123
+ VS++ MI+G+ G + A+E F +M L P+++ FA+ ISA G+ GQQIH
Sbjct: 205 DSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIH 264
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ +K + FVGN+ + Y K ++ ++ E E + VS+N +I + + +
Sbjct: 265 GFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVK 324
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ ++F+ + F F L I + S DL+ G LH V + + V N+++
Sbjct: 325 ESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLV 384
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K EA++ F + + + W I+A +E GL +F EM + V D
Sbjct: 385 DMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRAN-VSADQ 443
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
TFA +L A A LAS+ GKQ+H+ +IR +V G AL++MYA C I + K F E
Sbjct: 444 ATFACVLKASANLASILLGKQLHSCVIRSGF-MNVYSGCALLDMYANCASIKDAIKTFEE 502
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M RNVV+WN +++A+A + G LK FE+M +G +PDSV+F+ +LTAC+H LV+EG
Sbjct: 503 MSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEG 562
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
YFN M Y ++P EH+T ++D L R+G+ EAE+ + P D IV ++L++CR
Sbjct: 563 LKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNSCR 622
Query: 484 LRRDVVIGERLAKQLFHLQP-TTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
+ ++ + + A QLF+++ +PYV +SN++A G W V +K ++D G++K P+
Sbjct: 623 IHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGVRKLPA 682
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEI 568
YS +E++ F+ + H + EI
Sbjct: 683 YSWVEIKHKVHVFSANDDKHPQQLEI 708
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 190/381 (49%), Gaps = 9/381 (2%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH 95
D+I+S Y K G + +AR++FD+ ER +V+W+ MI + ++ A + F++MH
Sbjct: 78 DIIISG-----YVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMH 132
Query: 96 L---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSS 152
P+ + + ++ C ++ + Q HA +K G+ V N+L+ Y K G
Sbjct: 133 RSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLD 192
Query: 153 DALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
A ++ E + VSFN +I G+ N E+ E+F M G P F+FA +
Sbjct: 193 SARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASV 252
Query: 213 VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNT 272
+D G +H VK N FVGN + YSK + + E K F + E D +S+N
Sbjct: 253 GLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNV 312
Query: 273 FIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
I A + ++ + +F+E+ R +F F ++L+ A +Q G+Q+HA ++
Sbjct: 313 IITAYAWVGKVKESIDLFQELQFTTFDRK-NFPFPTMLSIAASSLDLQMGRQLHAQVVVS 371
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
+ D V N+LV+MYAKCG + ++F + R+ V W +I+A+ L + LKLF
Sbjct: 372 MADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLF 431
Query: 393 EQMKATGIKPDSVTFIGLLTA 413
+M+ + D TF +L A
Sbjct: 432 YEMRRANVSADQATFACVLKA 452
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 160/330 (48%), Gaps = 8/330 (2%)
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
SF + +IS Y+K G + A ++ + E +V++ +I + ++ + F++F M R
Sbjct: 74 SFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHR 133
Query: 195 QGLLPDRFSFAGGLEICSVSNDLRKGMIL---HCLTVKCKLESNPFVGNTIMALYSKFNL 251
G PD ++ L C NDL L H VK N V NT++ Y K
Sbjct: 134 SGSQPDYVTYITLLTGC---NDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGG 190
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ A + F + D +S+N I ++ E+ + +F EM N G +P DFTFA++++
Sbjct: 191 LDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQN-LGFKPSDFTFAAVIS 249
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
A GL G+QIH +++ ++V VGNA ++ Y+K ++ KLFNEM + VS
Sbjct: 250 ASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVS 309
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
+N II A+A ++ LF++++ T + F +L+ + ++ G +
Sbjct: 310 YNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVV 369
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ PD L+D+ + GK EA+
Sbjct: 370 VSMA-DPDFRVSNSLVDMYAKCGKFEEADR 398
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
N F + I++ Y K + A + F +E+ +++W T I A S + +F EM
Sbjct: 73 NSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMH 132
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
G +PD T+ ++L C L + Q HA ++++ + + V N L++ Y K G +
Sbjct: 133 RS-GSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGL 191
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ +LF EM + VS+N +I +AN+ L A++LF +M+ G KP TF +++A
Sbjct: 192 DSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISA 250
>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 1441
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 203/550 (36%), Positives = 311/550 (56%), Gaps = 8/550 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+ C+ L G LH ++K ++ V+N ++++YAK G + ARK F+ M
Sbjct: 412 TFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELM 471
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ VSW+A+I G+ Q + A F +M +LP+E AS +SACA +Q L +GQ
Sbjct: 472 KIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQ 531
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q H +K G + + G+SLI MY+K G A V+ N+VS NALIAG+
Sbjct: 532 QCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMGH 591
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK-LESNPFVG 239
E+ +F+ + GL P +FAG L+ C + L G +H +K L S+ V
Sbjct: 592 L-EEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVC 650
Query: 240 NTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
+++ LY ++E F ++ K L+ W I+ + +EK L ++ M +D+
Sbjct: 651 VSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDN- 709
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ PD FAS+L ACAG++S+Q+G++IH+ + N D ++L++MYAKCG + S
Sbjct: 710 ILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSL 769
Query: 359 KLFNEMLHRN-VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++F EM RN V+SWN++I A + AL++F+QM+ I PD VTF+G+L+AC+HA
Sbjct: 770 QVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHA 829
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
G V EG F+ M Y + P ++H C++D+LGR G L EAEE+ K DP++ T
Sbjct: 830 GRVSEGRKVFDLMVNNYKLLPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWST 889
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL ACR D V G+R A +L L+P ++S YVLLS++YA W R+ +K G+
Sbjct: 890 LLGACRKHGDEVRGKRAADKLMELKPQSSSSYVLLSSIYAESENWSGAVSLRREMKLKGV 949
Query: 538 KKEPSYSMIE 547
KK P YS IE
Sbjct: 950 KKLPGYSWIE 959
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 134/398 (33%), Positives = 216/398 (54%), Gaps = 5/398 (1%)
Query: 30 KMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALE 89
++G PD I V+N Y G++ ARK+F ++ N+V+W+ MISGH + G A+
Sbjct: 236 RVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAIS 295
Query: 90 FFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYM 146
FF ++ L S +SA A + L G +HA + K G +VG++L++MY
Sbjct: 296 FFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYA 355
Query: 147 KVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAG 206
K A V+ E N+V +NA++ GF +N ++ E F M R G PD F+F
Sbjct: 356 KCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTS 415
Query: 207 GLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKD 266
C+ + L G LH + +K K SN FV N ++ +Y+K + EA K F L++ D
Sbjct: 416 IFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHD 475
Query: 267 LISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
+SWN I ++ +F+ M ++ GV PD+ + ASI++ACA + ++ G+Q H
Sbjct: 476 NVSWNAIIVGYVQEEYNDEAFFMFRRMVSN-GVLPDEVSLASIVSACANVQELKRGQQCH 534
Query: 327 AHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGG 386
L+++ L+ G++L++MY KCG++ + +F M RNVVS N +IA + L
Sbjct: 535 CLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMGHL-E 593
Query: 387 SALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
A+ LF++++ G+KP VTF GLL C+ A ++ G
Sbjct: 594 EAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGR 631
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 141/481 (29%), Positives = 252/481 (52%), Gaps = 8/481 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+ S+L + L G +HA K G+ +V V + ++N+YAKC KM A++VF+ +
Sbjct: 311 SLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSL 370
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
ERN+V W+AM+ G Q G +EFFS M P+E+ F S SACA + L G
Sbjct: 371 GERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGG 430
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H +K +AS FV N+L+ MY K G +A + + VS+NA+I G+V+ +
Sbjct: 431 QLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEE 490
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
++ F +F+ M+ G+LPD S A + C+ +L++G HCL VK L+++ G+
Sbjct: 491 YNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGS 550
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +Y K ++ A F + ++++S N IA + E+ + +F+E+ G++
Sbjct: 551 SLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYT-MGHLEEAIHLFQEIQM-VGLK 608
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCSYK 359
P + TFA +L C G + G+QIH +++ L+ V +L+ +Y S
Sbjct: 609 PTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSET 668
Query: 360 LFNEMLH-RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
LF+E+ + + +V W +I+ +A AL+ ++ M++ I PD F +L AC
Sbjct: 669 LFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMS 728
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
++ G+ + + T G + D + LID+ + G + + + ++ P + I ++
Sbjct: 729 SLQNGQEIHSLIFHT-GFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSM 787
Query: 479 L 479
+
Sbjct: 788 I 788
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 135/477 (28%), Positives = 228/477 (47%), Gaps = 57/477 (11%)
Query: 9 LHHC----------SKTKALQQGIS----LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMI 54
L HC K K + Q +S +H+ LK+G+ ++ N +++LY KCG +
Sbjct: 34 LQHCWRIQAHNLFDEKPKPVLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVD 93
Query: 55 LARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
A+K F + ++++ +W++++S + G ++ F M + PNE+ FA +SAC+
Sbjct: 94 FAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACS 153
Query: 112 GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNA 171
G+Q + G+Q+H K G+ SF LI MY K Y DA LV+ A + VS+ A
Sbjct: 154 GLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTA 213
Query: 172 LIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK 231
LIAG+V + P + +VF M R G PD+ +
Sbjct: 214 LIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLV-------------------------- 247
Query: 232 LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK 291
T++ Y + +A K F I ++++WN I+ + E+ +S F
Sbjct: 248 ---------TVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFL 298
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
E+ G++ + S+L+A A L+ + +G +HA + L+ +V VG+ALVNMYAKC
Sbjct: 299 ELKKT-GLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKC 357
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
+ + ++FN + RN+V WN ++ A + L ++ F MK G +PD TF +
Sbjct: 358 SKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIF 417
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
+AC + G M K + ++ L+D+ ++G L EA K+F L
Sbjct: 418 SACASLHYLNFGGQLHTVMIKN-KFASNLFVANALVDMYAKSGALKEAR---KQFEL 470
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 219/464 (47%), Gaps = 34/464 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + +L CS + + G +H V K G ++++YAKC + AR VFD
Sbjct: 144 TFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGA 203
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
+ VSW+A+I+G+ + G + A++ F +M
Sbjct: 204 LNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQ---------------------------- 235
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ G+A ++++ Y+ +G +DA ++ + PN+V++N +I+G + E
Sbjct: 236 ----RVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAE 291
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ F + + GL R S L + + L G ++H K L+ N +VG+ ++
Sbjct: 292 EAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALV 351
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K + + A++ F + E++++ WN + + ++ + F M HG +PD+
Sbjct: 352 NMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKR-HGPQPDE 410
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
FTF SI +ACA L + G Q+H +I+ + ++ V NALV+MYAK G + + K F
Sbjct: 411 FTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFEL 470
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M + VSWN II + A +F +M + G+ PD V+ +++AC + +K G
Sbjct: 471 MKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRG 530
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+ + K G+ + LID+ + G +L A + P
Sbjct: 531 QQCHCLLVKV-GLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMP 573
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 133/268 (49%), Gaps = 9/268 (3%)
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
L ++H ++K + +GN I+ LY K + A+KAF +E+KD+ +WN+ ++
Sbjct: 57 LSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSM 116
Query: 277 CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
+ + F M N H VRP++FTFA +L+AC+GL V G+Q+H + +
Sbjct: 117 YLDHGLFATVVQSFVCMWN-HEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGF 175
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
L++MYAKC + + +F+ L+ + VSW +IA + A+K+F++M+
Sbjct: 176 RSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQ 235
Query: 397 ATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
G PD +T + ++ A G + + F + +P++ + +I + G
Sbjct: 236 RVGHAPDQITLVTVVNAYVALGRLADARKLFTQIP-----NPNVVAWNVMISGHAKRGFA 290
Query: 457 LEAEEY---TKKFPLGQDPIVLGTLLSA 481
EA + KK L LG++LSA
Sbjct: 291 EEAISFFLELKKTGLKATRSSLGSVLSA 318
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 186/603 (30%), Positives = 328/603 (54%), Gaps = 37/603 (6%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM-SE 65
+LL + S K+ Q LHA +L+ + ++S +L++Y+ + + +F+ + S
Sbjct: 10 TLLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLST-ILSIYSNLNLLHDSLLIFNSLPSP 68
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQI 122
++W ++I + G L +L FF QM P+ +F S + +C ++ L G+ +
Sbjct: 69 PTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESV 128
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEP------------------ 164
H ++ G + N+L++MY K +S + + Y + F+
Sbjct: 129 HGCIIRLGMGFDLYTCNALMNMYSKF-WSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLG 187
Query: 165 ------------NLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
++VS+N +I+G +N E + + M L PD F+ + L I +
Sbjct: 188 SLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFA 247
Query: 213 VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNT 272
+L KG +H ++ +++ F+G++++ +Y+K + ++ + F ++ + D ISWN+
Sbjct: 248 EYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNS 307
Query: 273 FIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
IA C +++GL F++M ++P+ +F+SI+ ACA L ++ GKQ+H ++IR
Sbjct: 308 IIAGCVQNGMFDEGLKFFQQMLIAK-IKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRS 366
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
R + +V + +ALV+MYAKCG I + +F++M ++VSW +I +A H A+ LF
Sbjct: 367 RFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLF 426
Query: 393 EQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
++M+ G+KP+ V F+ +LTAC+HAGLV E YFNSM + Y I P +EH+ + DLLGR
Sbjct: 427 KRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGR 486
Query: 453 AGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLL 512
G+L EA E+ + V TLL+ACR+ +++ + E+++K+LF + P YVLL
Sbjct: 487 VGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLL 546
Query: 513 SNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYML 572
SN+Y++ G W D R ++D G+KK+P+ S IE++ F + SH IN L
Sbjct: 547 SNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEAL 606
Query: 573 KTL 575
K L
Sbjct: 607 KVL 609
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 186/422 (44%), Gaps = 56/422 (13%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+L ++ L +G +H ++ G DV + + ++++YAKC ++ + +VF +
Sbjct: 238 TLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYML 297
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ + +SW+++I+G Q G L+FF QM + PN F+S + ACA + +L G+
Sbjct: 298 PQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGK 357
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H Y ++ + F+ ++L+ MY K G A ++ + ++VS+ A+I G+ +
Sbjct: 358 QLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHG 417
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+FK M +G+ P+ +F L CS +
Sbjct: 418 HAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHA-------------------------- 451
Query: 241 TIMALYSKFNLIGEAEKAFR-LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
L+ EA K F + ++ +I AA + L E +D +
Sbjct: 452 ---------GLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHI 502
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
P ++++LAAC +++ +++ L + Q++G L N+Y+ G + K
Sbjct: 503 EPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVD-PQNIGAYVLLSNIYSAAGRWKDARK 561
Query: 360 LFNEMLHRNV-----VSWNTI-------IAAHANH----RLGGSALKLFEQMKATGIKPD 403
L M + + SW I +A +H R+ + L EQM+ G D
Sbjct: 562 LRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLD 621
Query: 404 SV 405
+
Sbjct: 622 TT 623
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 189/559 (33%), Positives = 305/559 (54%), Gaps = 7/559 (1%)
Query: 24 LHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
LHA L++G ++P V S +++ Y + G++ A KVFDEMSER++ +W+AM+SG +
Sbjct: 89 LHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNA 148
Query: 83 EHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
A+ F +M + + +S + C + V +H Y++K G FV N
Sbjct: 149 RAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCN 208
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
+LI +Y K+G +A V+ +LV++N++I+G + Q ++F+ M G+ P
Sbjct: 209 ALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSP 268
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV-GNTIMALYSKFNLIGEAEKA 258
D + + D R LHC ++ + + + GN I+ +Y+K + I A++
Sbjct: 269 DVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRM 328
Query: 259 FRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
F + +D +SWNT I + + + M G++ TF S+L A + L +
Sbjct: 329 FDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGA 388
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA 378
+Q G ++HA I++ LN DV VG L+++YAKCG ++ + LF +M R+ WN II+
Sbjct: 389 LQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISG 448
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISP 438
H G AL LF +M+ GIKPD VTF+ LL AC+HAGLV +G ++F+ M+ TY I P
Sbjct: 449 LGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVP 508
Query: 439 DIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQL 498
+H+ C+ D+LGRAG+L EA + + P+ D V G LL ACR+ +V +G+ ++ L
Sbjct: 509 IAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNL 568
Query: 499 FHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVA 558
F L P YVL+SN+YA G W V R +++ L+K P +S IEV+ + F
Sbjct: 569 FELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSG 628
Query: 559 EFS--HSKIGEINYMLKTL 575
+ H + EI L++L
Sbjct: 629 NQTEPHPQHEEIQAELRSL 647
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 209/464 (45%), Gaps = 43/464 (9%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+L C + +H +K G+ ++ V N ++++Y K G + A+ VF M
Sbjct: 171 TVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGM 230
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
R+LV+W+++ISG Q G+ AL+ F M + P+ S SA A +
Sbjct: 231 ECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAK 290
Query: 121 QIHAYSLKFGYASISFV-GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+H Y ++ G+ + GN+++ MY K+ A ++ + VS+N LI G+++N
Sbjct: 291 SLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQN 350
Query: 180 QQPEKGFEVFKLMLR-QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ E + M + +GL + +F L S L++GM +H L++K L + +V
Sbjct: 351 GLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYV 410
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
G ++ LY+K + EA F + + WN I+ + L++F M + G
Sbjct: 411 GTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQE-G 469
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
++PD TF S+LAAC+ V G+ M++ D+ I+ Y
Sbjct: 470 IKPDHVTFVSLLAACSHAGLVDQGRSF---FDVMQVTYDIVP-------------IAKHY 513
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+ML R G + F ++ IKPDS + LL AC G
Sbjct: 514 ACMADMLGR-----------------AGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHG 556
Query: 419 LVKEGEAYFNSMEKTYGISPD-IEHFTCLIDLLGRAGKLLEAEE 461
V+ G+ + + + + P+ + ++ + ++ + GK +E
Sbjct: 557 NVEMGKV---ASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDE 597
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 126/269 (46%), Gaps = 21/269 (7%)
Query: 271 NTFIAACSHCADYEKGLSVFKE-MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
NT IAA S A + + +S + RPD FTF S++ A AS Q+HA
Sbjct: 37 NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNAS---AAQLHACA 93
Query: 330 IRMRL-NQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
+R+ L V +LV+ Y + G IS +YK+F+EM R+V +WN +++ + A
Sbjct: 94 LRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEA 153
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISP--DIEHFTC- 445
+ LF +M G+ D+VT +L C V G+ + Y + D E F C
Sbjct: 154 VGLFGRMVGEGVAGDTVTVSSVLPMC-----VLLGDQVLALVMHVYAVKHGLDKELFVCN 208
Query: 446 -LIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH-LQP 503
LID+ G+ G L EA+ +D + +++S C R A ++F ++
Sbjct: 209 ALIDVYGKLGMLEEAQCVFHGMEC-RDLVTWNSIISGCEQRGQTAA----ALKMFQGMRG 263
Query: 504 TTTSPYVL-LSNLYASDGMWGDVAGARKM 531
+ SP VL L +L ++ GD A+ +
Sbjct: 264 SGVSPDVLTLVSLASAIAQGGDGRSAKSL 292
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 172/490 (35%), Positives = 285/490 (58%), Gaps = 2/490 (0%)
Query: 88 LEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMK 147
L+ L P ++ + I+ACA ++L ++IHA+ +A +F+ NSLI +Y K
Sbjct: 39 LDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCK 98
Query: 148 VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGG 207
G +A V+ + ++VS+ +LIAG+ +N P + + ML+ P+ F+FA
Sbjct: 99 CGSVVEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASL 158
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDL 267
L+ D G +H L VKC + +VG+ ++ +Y++ + A F ++ K+
Sbjct: 159 LKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNG 218
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHA 327
+SWN I+ + D E L VF EM + G FT++SI +A AG+ +++ GK +HA
Sbjct: 219 VSWNALISGFARKGDGETALMVFAEMQRN-GFEATHFTYSSIFSALAGIGALEQGKWVHA 277
Query: 328 HLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGS 387
H+I+ R VGN +++MYAK G + + K+F +L++++V+WN+++ A A + LG
Sbjct: 278 HMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKE 337
Query: 388 ALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLI 447
A+ FE+M+ +GI + ++F+ +LTAC+H GLVKEG+ YF+ M K Y + P+IEH+ ++
Sbjct: 338 AVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVV 396
Query: 448 DLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTS 507
DLLGRAG L A + K P+ V G LL+ACR+ ++ +G+ A +F L P +
Sbjct: 397 DLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSG 456
Query: 508 PYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGE 567
P VLL N+YAS G W A RKM+K +G+KKEP+ S +E++ + F + +H + E
Sbjct: 457 PPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRAEE 516
Query: 568 INYMLKTLSL 577
I M +S+
Sbjct: 517 IYKMWDEISM 526
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 187/381 (49%), Gaps = 8/381 (2%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C+++K L +HA + D + N +++LY KCG ++ A KVFD+M +++VSW
Sbjct: 61 CAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKDMVSW 120
Query: 72 SAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
+++I+G+ Q A+ M PN + FAS + A G QIHA ++K
Sbjct: 121 TSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHALAVK 180
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
+ +VG++L+ MY + G A V+ + N VS+NALI+GF E V
Sbjct: 181 CDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMV 240
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
F M R G F+++ + L +G +H +K + + FVGNT++ +Y+K
Sbjct: 241 FAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAK 300
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
+ +A K F + KDL++WN+ + A + ++ +S F+EM G+ + +F
Sbjct: 301 SGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKS-GIYLNQISFLC 359
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK-LFNEMLHR 367
IL AC+ V+ GK + L ++ +V++ + GL++ + +F +
Sbjct: 360 ILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEP 419
Query: 368 NVVSWNTIIAA---HANHRLG 385
W ++AA H N ++G
Sbjct: 420 TAAVWGALLAACRMHKNAKVG 440
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+ + AL+QG +HA ++K + V N +L++YAK G MI ARKVF+ +
Sbjct: 255 TYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERV 314
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
++LV+W++M++ Q G A+ F +M + N+ F ++AC+
Sbjct: 315 LNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTACS 365
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 176/499 (35%), Positives = 290/499 (58%), Gaps = 9/499 (1%)
Query: 79 HQAGEH--LLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF 136
HQ H + A++ + + + ++ I C+ ++ +G+++H + GY F
Sbjct: 32 HQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMF 91
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
V N+L++MY+K +A ++ E E N+VS+ +I+ + N+ +K + LM R+G
Sbjct: 92 VVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAY-SNKLNDKALKCLILMFREG 150
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
+ P+ F+++ L C +LR+ LHC +K LES+ FV + ++ +YSK++ + A
Sbjct: 151 VRPNMFTYSSVLRACDGLPNLRQ---LHCGIIKTGLESDVFVRSALIDVYSKWSDLDNAL 207
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
F + +DL+ WN+ I + +D + L++FK M G D T S+L AC GL
Sbjct: 208 GVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKR-AGFLADQATLTSVLRACTGL 266
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
A ++ G+Q+H H+ ++ +QD+ + NAL++MY KCG + + F+ M+ ++V+SW+T++
Sbjct: 267 ALLELGRQVHVHV--LKFDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMV 324
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
A A + AL+LFE MK +G +P+ +T +G+L AC+HAGLV++G YF SM+K +G+
Sbjct: 325 AGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGV 384
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAK 496
P EH+ CLIDLLGRAG+L EA + + D + TLL ACR+ R+V + AK
Sbjct: 385 DPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAK 444
Query: 497 QLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFT 556
++ L+P Y+LLSN+YA+ W DVA RK + + G++K P S IEV F
Sbjct: 445 KIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFI 504
Query: 557 VAEFSHSKIGEINYMLKTL 575
+ + SH KI EI L L
Sbjct: 505 LGDTSHPKIEEIVQRLNDL 523
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 208/415 (50%), Gaps = 15/415 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + S L+ CS A+Q+G +H + G +P + V N +LN+Y K + A +FD
Sbjct: 55 AITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFD 114
Query: 62 EMSERNLVSWSAMISGHHQA--GEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKG 119
EM ERN+VSW+ MIS + + L L + + PN + ++S + AC G+ +L
Sbjct: 115 EMPERNVVSWTTMISAYSNKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNL--- 171
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+H +K G S FV ++LI +Y K +AL V+ E +LV +N++I GF +N
Sbjct: 172 RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQN 231
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ +FK M R G L D+ + L C+ L G +H + K + + +
Sbjct: 232 SDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVL--KFDQDLILN 289
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N ++ +Y K + +A AF + EKD+ISW+T +A + + L +F+ M + G
Sbjct: 290 NALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMK-ESGS 348
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN--ALVNMYAKCGLISCS 357
RP+ T +L AC+ V+ G + ++ D G + L+++ + G + +
Sbjct: 349 RPNYITVLGVLFACSHAGLVEKGWYYFRSMKKL-FGVDPGREHYGCLIDLLGRAGRLDEA 407
Query: 358 YKLFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP-DSVTFIGL 410
KL +EM + V+W T++ A HR L ++ K ++P D+ T+I L
Sbjct: 408 VKLIHEMECEPDSVTWRTLLGACRVHR--NVDLAIYAAKKIIELEPEDAGTYILL 460
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 151/287 (52%), Gaps = 10/287 (3%)
Query: 174 AGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK-L 232
A F + M R G+ D +++ ++ CS +++G +H + CK
Sbjct: 28 ANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVH-EHIFCKGY 86
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
E FV NT++ +Y KFNL+ EAE F + E++++SW T I+A S+ + +K L
Sbjct: 87 EPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLN-DKALKCLIL 145
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
M + GVRP+ FT++S+L AC GL ++ +Q+H +I+ L DV V +AL+++Y+K
Sbjct: 146 MFRE-GVRPNMFTYSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWS 201
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
+ + +F+EM R++V WN+II A + G AL LF++MK G D T +L
Sbjct: 202 DLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLR 261
Query: 413 ACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
AC L++ G + K D+ LID+ + G L +A
Sbjct: 262 ACTGLALLELGRQVHVHVLK---FDQDLILNNALIDMYCKCGSLEDA 305
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 189/553 (34%), Positives = 292/553 (52%), Gaps = 14/553 (2%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
SLH +K G+ V V N +L+ Y K G + AR+VF EM +++ V+++AM+ G + G
Sbjct: 370 SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEG 429
Query: 83 EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLI 142
H AL+ F+ M A L Q H+ S ++ FV NSL+
Sbjct: 430 LHTQALQLFAAMR------------RAGYSRHPLHLLQYSHSRSRSTSVLNV-FVNNSLL 476
Query: 143 SMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRF 202
Y K D ++ E E + VS+N +IA + NQ +F+ M + G
Sbjct: 477 DFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVL 536
Query: 203 SFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLI 262
+A L + D+ G +H V L S +GN ++ +YSK ++ A+ F
Sbjct: 537 PYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNR 596
Query: 263 EEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG 322
EK ISW I +E+ L +F +M G+RPD TF+SI+ A + LA + G
Sbjct: 597 SEKSAISWTALITGYVQNGQHEEALQLFSDMRRA-GLRPDRATFSSIIKASSSLAMIGLG 655
Query: 323 KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH 382
+Q+H++LIR V G+ LV+MYAKCG + + + F+EM RN +SWN +I+A+A++
Sbjct: 656 RQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHY 715
Query: 383 RLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEH 442
+A+K+FE M G PDSVTF+ +L AC+H GL E YF+ M+ Y ISP EH
Sbjct: 716 GEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEH 775
Query: 443 FTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQ 502
+ C+ID LGR G + ++ + P DPI+ ++L +CR+ + + A +LF ++
Sbjct: 776 YACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGME 835
Query: 503 PTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
PT +PYV+LSN+YA G W D A +K+++D G++KE YS +E++ F + +
Sbjct: 836 PTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTS 895
Query: 563 SKIGEINYMLKTL 575
I EI L L
Sbjct: 896 PMIDEIKDELDRL 908
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 206/436 (47%), Gaps = 38/436 (8%)
Query: 41 NHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLL 97
N +L+ Y+ G + A+ +F RN +W+ M+ H AG AL F M ++
Sbjct: 292 NLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVI 351
Query: 98 PNEYIFASAIS--ACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL 155
P+ + ++ C + SL H +++KFG + FV N+L+ Y K G + A
Sbjct: 352 PDRVTVTTVLNLPGCT-VPSL------HPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAAR 404
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN 215
V+ E + + V++NA++ G + + ++F M R G R L + S+
Sbjct: 405 RVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGY--SRHP----LHLLQYSH 458
Query: 216 DL-RKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFI 274
R +L N FV N+++ YSK + + + + F + E+D +S+N I
Sbjct: 459 SRSRSTSVL-----------NVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVII 507
Query: 275 AACSHCADYEKGLSVFKEMSN---DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
AA + L +F+EM D V P +A++L+ L V GKQIHA L+
Sbjct: 508 AAYAWNQCAATVLRLFREMQKLGFDRQVLP----YATMLSVAGSLPDVHIGKQIHAQLVL 563
Query: 332 MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
+ L + +GNAL++MY+KCG++ + F+ ++ +SW +I + + AL+L
Sbjct: 564 LGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQL 623
Query: 392 FEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLG 451
F M+ G++PD TF ++ A + ++ G + + ++ G + + L+D+
Sbjct: 624 FSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRS-GYKSSVFSGSVLVDMYA 682
Query: 452 RAGKLLEAEEYTKKFP 467
+ G L EA + P
Sbjct: 683 KCGCLDEALRTFDEMP 698
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 114/195 (58%), Gaps = 3/195 (1%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G +HA ++ +G+ + ++ N ++++Y+KCG + A+ F SE++ +SW+A+I+G+ Q
Sbjct: 554 GKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQ 613
Query: 81 AGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
G+H AL+ FS M L P+ F+S I A + + + G+Q+H+Y ++ GY S F
Sbjct: 614 NGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFS 673
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
G+ L+ MY K G +AL + E E N +S+NA+I+ + + + ++F+ ML G
Sbjct: 674 GSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGF 733
Query: 198 LPDRFSFAGGLEICS 212
PD +F L CS
Sbjct: 734 NPDSVTFLSVLAACS 748
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS++ S + G LH+ +++ G + V + ++++YAKCG + A + FDEM
Sbjct: 638 TFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEM 697
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
ERN +SW+A+IS + GE A++ F M P+ F S ++AC+
Sbjct: 698 PERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACS 748
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 10/167 (5%)
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
N F N I++ YS + A+ F ++ +W + A + LS+F+ M
Sbjct: 287 NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML 346
Query: 295 NDHGVRPDDFTFASI--LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
+ GV PD T ++ L C +H I+ L+ V V N L++ Y K G
Sbjct: 347 GE-GVIPDRVTVTTVLNLPGCT-------VPSLHPFAIKFGLDTHVFVCNTLLDAYCKHG 398
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG 399
L++ + ++F EM ++ V++N ++ + L AL+LF M+ G
Sbjct: 399 LLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAG 445
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 326 HAHLIRMRLNQ----DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN 381
H H R +Q ++ N +++ Y+ G + + LF HRN +W ++ AHA
Sbjct: 272 HLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAA 331
Query: 382 HRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
AL LF M G+ PD VT +L
Sbjct: 332 AGRTSDALSLFRAMLGEGVIPDRVTVTTVLN 362
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 184/578 (31%), Positives = 316/578 (54%), Gaps = 5/578 (0%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ ++S+LL + G +H V+KMG V V N +L +YA G+ + A VF
Sbjct: 261 STTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFK 320
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
+M ++L+SW+++++ G L AL M N F SA++AC K
Sbjct: 321 QMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEK 380
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ +H + G +GN+L+SMY K+G S++ V + ++V++NALI G+ E
Sbjct: 381 GRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAE 440
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDL-RKGMILHCLTVKCKLESNPF 237
++ P+K F+ M +G+ + + L C + DL +G LH V ES+
Sbjct: 441 DEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEH 500
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N+++ +Y+K + ++ F ++ +++I+WN +AA +H E+ L + +M +
Sbjct: 501 VKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS-F 559
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
GV D F+F+ L+A A LA ++ G+Q+H +++ D + NA +MY+KCG I
Sbjct: 560 GVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEV 619
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
K+ ++R++ SWN +I+A H F +M GIKP VTF+ LLTAC+H
Sbjct: 620 VKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHG 679
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV +G AY++ + + +G+ P IEH C+IDLLGR+G+L EAE + K P+ + +V +
Sbjct: 680 GLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRS 739
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL++C++ ++ G + A+ L L+P S YVL SN++A+ G W DV RK + +
Sbjct: 740 LLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNI 799
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KK+ + S ++++ F + + +H + EI L+ +
Sbjct: 800 KKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDI 837
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 134/468 (28%), Positives = 235/468 (50%), Gaps = 9/468 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+S ++ C K G + V+K G++ + V N ++++ G + A +FD+M
Sbjct: 162 SMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQM 221
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
SER+ +SW+++ + + Q G + FS M H N ++ +S + G+
Sbjct: 222 SERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGR 281
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IH +K G+ S+ V N+L+ MY G S +A LV+ + +L+S+N+L+A FV +
Sbjct: 282 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG 341
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ + M+ G + +F L C + KG ILH L V L N +GN
Sbjct: 342 RSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGN 401
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++++Y K + E+ + + +D+++WN I + D +K L+ F+ M + GV
Sbjct: 402 ALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVE-GVS 460
Query: 301 PDDFTFASILAACAGLAS-VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+ T S+L+AC ++ GK +HA+++ D V N+L+ MYAKCG +S S
Sbjct: 461 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 520
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
LFN + +RN+++WN ++AA+A+H G LKL +M++ G+ D +F L+A +
Sbjct: 521 LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 580
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
++EG+ + + G D F D+ + G E E K P
Sbjct: 581 LEEGQQ-LHGLAVKLGFEHDSFIFNAAADMYSKCG---EIGEVVKMLP 624
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 134/461 (29%), Positives = 234/461 (50%), Gaps = 5/461 (1%)
Query: 5 ISSLLHHCSKTKAL-QQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
I+SL+ C ++ ++ ++G+ +H V K G+ DV VS +L+LY G + +RKVF+EM
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+RN+VSW++++ G+ GE ++ + M + NE + IS+C ++ G+
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QI +K G S V NSLISM +G A ++ + E + +S+N++ A + +N
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E+ F +F LM R + + + L + + + G +H L VK +S V N
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN 300
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
T++ +Y+ EA F+ + KDLISWN+ +A+ + L + M + G
Sbjct: 301 TLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS-GKS 359
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ TF S LAAC + G+ +H ++ L + +GNALV+MY K G +S S ++
Sbjct: 360 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 419
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
+M R+VV+WN +I +A AL F+ M+ G+ + +T + +L+AC G +
Sbjct: 420 LLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL 479
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
E ++ + G D LI + + G L +++
Sbjct: 480 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 520
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 212/426 (49%), Gaps = 6/426 (1%)
Query: 46 LYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYI 102
+Y K G++ AR +FD M RN VSW+ M+SG + G +L +EFF +M L P+ ++
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 103 FASAISACAGIQSLVK-GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA 161
AS ++AC S+ + G Q+H + K G S +V +++ +Y G S + V+ E
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
+ N+VS+ +L+ G+ + +PE+ +++K M +G+ + S + + C + D G
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
+ VK LES V N+++++ + A F + E+D ISWN+ AA +
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
E+ +F M H + T +++L+ + + G+ IH +++M + V V
Sbjct: 241 HIEESFRIFSLMRRFHD-EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
N L+ MYA G + +F +M ++++SWN+++A+ N AL L M ++G
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 359
Query: 402 PDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ VTF L AC ++G + + G+ + L+ + G+ G++ E+
Sbjct: 360 VNYVTFTSALAACFTPDFFEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 418
Query: 462 YTKKFP 467
+ P
Sbjct: 419 VLLQMP 424
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 201/605 (33%), Positives = 312/605 (51%), Gaps = 51/605 (8%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLN---LYAKCGKMILARKVFDEM 63
SLLH C K LQ +HA ++K G+ + +L L + A VFD +
Sbjct: 7 SLLHXC---KTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTI 63
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
E L+ W+ M GH + + + AL+ + M LLPN Y F + +CA + +GQ
Sbjct: 64 QEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQ 123
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV----------------------- 157
Q+H LKFG+ ++ SLISMY++ G DA V
Sbjct: 124 QLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRG 183
Query: 158 --------YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
+ E ++VS+NA I+G+ E ++ E+FK M++ + PD + L
Sbjct: 184 XIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLS 243
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
C+ S + G +H N + N ++ LYSK + A F+ + KD+IS
Sbjct: 244 ACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVIS 303
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
WNT I +H Y++ L +F++M G +P+D T SIL+ACA L ++ G+ IH +
Sbjct: 304 WNTLIGGYTHMNLYKEALLLFQDMLRS-GEKPNDVTMLSILSACAHLGAIDIGRWIHVY- 361
Query: 330 IRMRLNQDVGVGNA------LVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR 383
I RL GV NA L++MYAKCG I + ++F+ ML+R++ SWN +I A H
Sbjct: 362 IDKRLK---GVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHG 418
Query: 384 LGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF 443
+A +F +M+ GI+PD +TF+GLL+AC+H+G++ G F SM + Y + P +EH+
Sbjct: 419 RANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHY 478
Query: 444 TCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQP 503
C+IDL G +G EAE+ + D ++ +LL AC++ +V +GE A+ L ++P
Sbjct: 479 GCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEP 538
Query: 504 TTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHS 563
YVLLSN+YA+ W +VA R +L D G+KK P S IE+ +F + + H
Sbjct: 539 ENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHP 598
Query: 564 KIGEI 568
+ EI
Sbjct: 599 RNREI 603
>gi|242039301|ref|XP_002467045.1| hypothetical protein SORBIDRAFT_01g018760 [Sorghum bicolor]
gi|241920899|gb|EER94043.1| hypothetical protein SORBIDRAFT_01g018760 [Sorghum bicolor]
Length = 564
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 191/542 (35%), Positives = 301/542 (55%), Gaps = 13/542 (2%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQP-DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVS 70
C +T +++G +LHA +L G ++NH++ +Y+ C A +VF + N VS
Sbjct: 27 CGRTGDIRRGRALHARLLLTGAAATSTFLANHLITMYSYCADAASAVRVFGVLPRPNPVS 86
Query: 71 WSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSL 127
W+ ++SG Q H AL F+ M H+ P ++ +SA A A + + G Q+H
Sbjct: 87 WTTLVSGLVQNSMHHDALAAFAAMRRAHVAPTQFALSSAARAAAALSAPRPGTQLHCIGT 146
Query: 128 KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE 187
+FG+ + FV ++L MY K G +A V+ + + V++ +I G+ +N +
Sbjct: 147 RFGFDTELFVASNLADMYSKCGLLDEACRVFDQMPHRDAVTWTTMIDGYAKNGSLKAAIL 206
Query: 188 VFKLMLRQGLL-PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
F+ M +GL+ D+ F L D G LHC +K E V N ++ +Y
Sbjct: 207 AFRDMKCEGLVGADQHVFCSALSASGGLKDGWFGRSLHCCIIKAGFELETVVRNALLDMY 266
Query: 247 SKFNLIGEAEKAFRLIEEK----DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+K G+ E A R+++ +++S + I E+ L + E+ GV P+
Sbjct: 267 AKS---GDLESASRVVKIDPGGWNVVSGTSLIDGYIEVDRIEEALETYTELGR-QGVEPN 322
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+FTFAS++ CA ++ G Q+HA +I+ L D VG+ LV MY KCGLIS S +LFN
Sbjct: 323 EFTFASMIKGCAMQDLLEQGAQLHAQVIKTSLISDSFVGSTLVYMYGKCGLISLSLQLFN 382
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
E+ + + V+WN +I +A H G A++ F++M A+GI+P+ +TF+ LLTAC+HAGLV E
Sbjct: 383 EIGYHSEVAWNAVINVYAQHGHGWGAIQAFDRMTASGIRPNHITFVCLLTACSHAGLVDE 442
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G YF SM+ +GI P EH++C+ID+ GRAG+L EAE++ + P+ + +LL AC
Sbjct: 443 GLEYFYSMKDAHGIEPKEEHYSCIIDMYGRAGRLDEAEKFISEMPVKPNAYGWCSLLGAC 502
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
R+R + +GE A+ L L P T +V LS +YAS G W D RK++KDS +K P
Sbjct: 503 RMRGNKELGEIAAQNLMKLDPDNTGIHVSLSGIYASLGQWEDAKSVRKLMKDSSIKNLPG 562
Query: 543 YS 544
+S
Sbjct: 563 FS 564
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 165/348 (47%), Gaps = 3/348 (0%)
Query: 109 ACAGIQSLVKGQQIHAYSLKFGYASIS-FVGNSLISMYMKVGYSSDALLVYGEAFEPNLV 167
+C + +G+ +HA L G A+ S F+ N LI+MY ++ A+ V+G PN V
Sbjct: 26 SCGRTGDIRRGRALHARLLLTGAAATSTFLANHLITMYSYCADAASAVRVFGVLPRPNPV 85
Query: 168 SFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLT 227
S+ L++G V+N F M R + P +F+ + + + R G LHC+
Sbjct: 86 SWTTLVSGLVQNSMHHDALAAFAAMRRAHVAPTQFALSSAARAAAALSAPRPGTQLHCIG 145
Query: 228 VKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGL 287
+ ++ FV + + +YSK L+ EA + F + +D ++W T I + + +
Sbjct: 146 TRFGFDTELFVASNLADMYSKCGLLDEACRVFDQMPHRDAVTWTTMIDGYAKNGSLKAAI 205
Query: 288 SVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNM 347
F++M + V D F S L+A GL G+ +H +I+ + V NAL++M
Sbjct: 206 LAFRDMKCEGLVGADQHVFCSALSASGGLKDGWFGRSLHCCIIKAGFELETVVRNALLDM 265
Query: 348 YAKCGLISCSYKLFN-EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVT 406
YAK G + + ++ + NVVS ++I + AL+ + ++ G++P+ T
Sbjct: 266 YAKSGDLESASRVVKIDPGGWNVVSGTSLIDGYIEVDRIEEALETYTELGRQGVEPNEFT 325
Query: 407 FIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
F ++ C L+++G + KT IS T L+ + G+ G
Sbjct: 326 FASMIKGCAMQDLLEQGAQLHAQVIKTSLISDSFVGST-LVYMYGKCG 372
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S++ C+ L+QG LHA V+K + D V + ++ +Y KCG + L+ ++F+E+
Sbjct: 325 TFASMIKGCAMQDLLEQGAQLHAQVIKTSLISDSFVGSTLVYMYGKCGLISLSLQLFNEI 384
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+ V+W+A+I+ + Q G A++ F +M + PN F ++AC+ + +G
Sbjct: 385 GYHSEVAWNAVINVYAQHGHGWGAIQAFDRMTASGIRPNHITFVCLLTACSHAGLVDEGL 444
Query: 121 QIHAYSLK--FGYASISFVGNSLISMYMKVGYSSDALLVYGE-AFEPNLVSFNALIA 174
+ + YS+K G + +I MY + G +A E +PN + +L+
Sbjct: 445 E-YFYSMKDAHGIEPKEEHYSCIIDMYGRAGRLDEAEKFISEMPVKPNAYGWCSLLG 500
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 184/578 (31%), Positives = 316/578 (54%), Gaps = 5/578 (0%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ ++S+LL + G +H V+KMG V V N +L +YA G+ + A VF
Sbjct: 244 STTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFK 303
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
+M ++L+SW+++++ G L AL M N F SA++AC K
Sbjct: 304 QMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEK 363
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ +H + G +GN+L+SMY K+G S++ V + ++V++NALI G+ E
Sbjct: 364 GRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAE 423
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDL-RKGMILHCLTVKCKLESNPF 237
++ P+K F+ M +G+ + + L C + DL +G LH V ES+
Sbjct: 424 DEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEH 483
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N+++ +Y+K + ++ F ++ +++I+WN +AA +H E+ L + +M +
Sbjct: 484 VKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS-F 542
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
GV D F+F+ L+A A LA ++ G+Q+H +++ D + NA +MY+KCG I
Sbjct: 543 GVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEV 602
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
K+ ++R++ SWN +I+A H F +M GIKP VTF+ LLTAC+H
Sbjct: 603 VKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHG 662
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV +G AY++ + + +G+ P IEH C+IDLLGR+G+L EAE + K P+ + +V +
Sbjct: 663 GLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRS 722
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL++C++ ++ G + A+ L L+P S YVL SN++A+ G W DV RK + +
Sbjct: 723 LLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNI 782
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KK+ + S ++++ F + + +H + EI L+ +
Sbjct: 783 KKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDI 820
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 234/459 (50%), Gaps = 6/459 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+S ++ C K G + V+K G++ + V N ++++ G + A +FD+M
Sbjct: 145 SMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQM 204
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
SER+ +SW+++ + + Q G + FS M H N ++ +S + G+
Sbjct: 205 SERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGR 264
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IH +K G+ S+ V N+L+ MY G S +A LV+ + +L+S+N+L+A FV +
Sbjct: 265 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG 324
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ + M+ G + +F L C + KG ILH L V L N +GN
Sbjct: 325 RSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGN 384
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++++Y K + E+ + + +D+++WN I + D +K L+ F+ M + GV
Sbjct: 385 ALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVE-GVS 443
Query: 301 PDDFTFASILAACAGLAS-VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+ T S+L+AC ++ GK +HA+++ D V N+L+ MYAKCG +S S
Sbjct: 444 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 503
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
LFN + +RN+++WN ++AA+A+H G LKL +M++ G+ D +F L+A +
Sbjct: 504 LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 563
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLE 458
++EG+ + + G D F D+ + G++ E
Sbjct: 564 LEEGQQ-LHGLAVKLGFEHDSFIFNAAADMYSKCGEIGE 601
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 134/461 (29%), Positives = 234/461 (50%), Gaps = 5/461 (1%)
Query: 5 ISSLLHHCSKTKAL-QQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
I+SL+ C ++ ++ ++G+ +H V K G+ DV VS +L+LY G + +RKVF+EM
Sbjct: 44 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 103
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+RN+VSW++++ G+ GE ++ + M + NE + IS+C ++ G+
Sbjct: 104 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 163
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QI +K G S V NSLISM +G A ++ + E + +S+N++ A + +N
Sbjct: 164 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 223
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E+ F +F LM R + + + L + + + G +H L VK +S V N
Sbjct: 224 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN 283
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
T++ +Y+ EA F+ + KDLISWN+ +A+ + L + M + G
Sbjct: 284 TLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS-GKS 342
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ TF S LAAC + G+ +H ++ L + +GNALV+MY K G +S S ++
Sbjct: 343 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 402
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
+M R+VV+WN +I +A AL F+ M+ G+ + +T + +L+AC G +
Sbjct: 403 LLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL 462
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
E ++ + G D LI + + G L +++
Sbjct: 463 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 503
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 201/409 (49%), Gaps = 6/409 (1%)
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVK- 118
M RN VSW+ M+SG + G +L +EFF +M L P+ ++ AS ++AC S+ +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G Q+H + K G S +V +++ +Y G S + V+ E + N+VS+ +L+ G+ +
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+PE+ +++K M +G+ + S + + C + D G + VK LES V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N+++++ + A F + E+D ISWN+ AA + E+ +F M H
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ T +++L+ + + G+ IH +++M + V V N L+ MYA G +
Sbjct: 241 -EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 299
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+F +M ++++SWN+++A+ N AL L M ++G + VTF L AC
Sbjct: 300 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD 359
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
++G + + G+ + L+ + G+ G++ E+ + P
Sbjct: 360 FFEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 407
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 184/578 (31%), Positives = 316/578 (54%), Gaps = 5/578 (0%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ ++S+LL + G +H V+KMG V V N +L +YA G+ + A VF
Sbjct: 351 STTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFK 410
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
+M ++L+SW+++++ G L AL M N F SA++AC K
Sbjct: 411 QMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEK 470
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ +H + G +GN+L+SMY K+G S++ V + ++V++NALI G+ E
Sbjct: 471 GRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAE 530
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDL-RKGMILHCLTVKCKLESNPF 237
++ P+K F+ M +G+ + + L C + DL +G LH V ES+
Sbjct: 531 DEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEH 590
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N+++ +Y+K + ++ F ++ +++I+WN +AA +H E+ L + +M +
Sbjct: 591 VKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS-F 649
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
GV D F+F+ L+A A LA ++ G+Q+H +++ D + NA +MY+KCG I
Sbjct: 650 GVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEV 709
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
K+ ++R++ SWN +I+A H F +M GIKP VTF+ LLTAC+H
Sbjct: 710 VKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHG 769
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV +G AY++ + + +G+ P IEH C+IDLLGR+G+L EAE + K P+ + +V +
Sbjct: 770 GLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRS 829
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL++C++ ++ G + A+ L L+P S YVL SN++A+ G W DV RK + +
Sbjct: 830 LLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNI 889
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KK+ + S ++++ F + + +H + EI L+ +
Sbjct: 890 KKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDI 927
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 227/442 (51%), Gaps = 6/442 (1%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G + V+K G++ + V N ++++ G + A +FD+MSER+ +SW+++ + + Q
Sbjct: 269 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 328
Query: 81 AGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
G + FS M H N ++ +S + G+ IH +K G+ S+ V
Sbjct: 329 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 388
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
N+L+ MY G S +A LV+ + +L+S+N+L+A FV + + + M+ G
Sbjct: 389 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 448
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
+ +F L C + KG ILH L V L N +GN ++++Y K + E+ +
Sbjct: 449 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 508
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
+ +D+++WN I + D +K L+ F+ M + GV + T S+L+AC
Sbjct: 509 VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVE-GVSSNYITVVSVLSACLLPG 567
Query: 318 S-VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
++ GK +HA+++ D V N+L+ MYAKCG +S S LFN + +RN+++WN ++
Sbjct: 568 DLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAML 627
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
AA+A+H G LKL +M++ G+ D +F L+A +++EG+ + + G
Sbjct: 628 AANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ-LHGLAVKLGF 686
Query: 437 SPDIEHFTCLIDLLGRAGKLLE 458
D F D+ + G++ E
Sbjct: 687 EHDSFIFNAAADMYSKCGEIGE 708
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 224/458 (48%), Gaps = 24/458 (5%)
Query: 5 ISSLLHHCSKTKAL-QQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
I+SL+ C ++ ++ ++G+ +H V K G+ DV VS +L+LY G + +RKVF+EM
Sbjct: 176 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 235
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
+RN+VSW++++ G+ GE ++ + L G+QI
Sbjct: 236 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKDESL----------------------GRQII 273
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+K G S V NSLISM +G A ++ + E + +S+N++ A + +N E
Sbjct: 274 GQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIE 333
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ F +F LM R + + + L + + + G +H L VK +S V NT++
Sbjct: 334 ESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLL 393
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+ EA F+ + KDLISWN+ +A+ + L + M + G +
Sbjct: 394 RMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS-GKSVNY 452
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
TF S LAAC + G+ +H ++ L + +GNALV+MY K G +S S ++ +
Sbjct: 453 VTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQ 512
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M R+VV+WN +I +A AL F+ M+ G+ + +T + +L+AC G + E
Sbjct: 513 MPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLER 572
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
++ + G D LI + + G L +++
Sbjct: 573 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 610
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 218/451 (48%), Gaps = 31/451 (6%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G ++HA +K ++ V+ +N ++N+Y K G++ AR +FD M RN VSW+ M+SG +
Sbjct: 91 GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150
Query: 81 AGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVK-GQQIHAYSLKFGYASISF 136
G +L +EFF +M L P+ ++ AS ++AC S+ + G Q+H + K G S +
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 210
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
V +++ +Y G S + V+ E + N+VS+ +L+ G+ + +PE+ +++K
Sbjct: 211 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYK------ 264
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
D G + VK LES V N+++++ + A
Sbjct: 265 -------------------DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYAN 305
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
F + E+D ISWN+ AA + E+ +F M H + T +++L+ +
Sbjct: 306 YIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD-EVNSTTVSTLLSVLGHV 364
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
+ G+ IH +++M + V V N L+ MYA G + +F +M ++++SWN+++
Sbjct: 365 DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLM 424
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
A+ N AL L M ++G + VTF L AC ++G + + G+
Sbjct: 425 ASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGR-ILHGLVVVSGL 483
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+ L+ + G+ G++ E+ + P
Sbjct: 484 FYNQIIGNALVSMYGKIGEMSESRRVLLQMP 514
>gi|39546235|emb|CAE04244.3| OSJNBa0089N06.5 [Oryza sativa Japonica Group]
gi|125549842|gb|EAY95664.1| hypothetical protein OsI_17530 [Oryza sativa Indica Group]
gi|215686910|dbj|BAG90780.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 559
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 190/546 (34%), Positives = 308/546 (56%), Gaps = 6/546 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQP-DVIVSNHVLNLYAKCGKMILARKVFDEMS 64
SSLL C + A +QG S+H V P D+ +S ++ YA+ G + ARKVFD M
Sbjct: 15 SSLLQCCISSCAFRQGKSVHGRVAAASASPPDLHLSTKLVIFYARFGDVAAARKVFDGMP 74
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQ 121
R++VSW+AM+SG+ + G ALE F+ M PN++ + SA SACAG G+Q
Sbjct: 75 HRSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGAGCARSGEQ 134
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+HA + K +A FV ++L+ M+++ G DA ++ E + ++VS+NALI GFVE
Sbjct: 135 VHACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMGKKDVVSWNALIRGFVERGH 194
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+F ML++ ++PD ++ L+ C + ++H +K V +
Sbjct: 195 DGDALGLFSSMLKEAMIPDHYTLGSALKACGIVGVAVNVELIHSCIIKLGYWDEKVVIGS 254
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY-EKGLSVFKEMSNDHGVR 300
++ Y+K + A + I E DL+S I+ + +Y E + +F ++ + G+
Sbjct: 255 LINSYAKCRSMSSARVIYDSISEPDLVSSTALISGYTMDRNYSEDAMELFCKI-HRKGLW 313
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D +S+L CA +AS + G QIHA++ + + D+ + NALV+MYAK G S + +
Sbjct: 314 IDGVLLSSVLCLCASVASARFGTQIHAYMCKKQPMGDIALDNALVDMYAKAGEFSDAKRA 373
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+EM +RNV+SW ++I A + G A+ LF +M G++P+ VTF+ LL+AC H GL
Sbjct: 374 FDEMPYRNVISWTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLLSACGHCGLT 433
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+G YF SM YGI P EH++ IDLL R G+L +A + +K L + +LG +L
Sbjct: 434 NKGMEYFTSMMSRYGIDPRAEHYSSAIDLLARGGQLEDAWKLVQKTNLKPNSSMLGAMLG 493
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC+L ++++GE AK LF + P ++ Y +L+N+YA +W D R+++ ++ KE
Sbjct: 494 ACKLHGNMLLGETAAKNLFSIDPGSSVNYAVLANMYAECSLWEDAQRTREVIDETTDGKE 553
Query: 541 PSYSMI 546
+S+I
Sbjct: 554 VGFSVI 559
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 88/174 (50%), Gaps = 5/174 (2%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+SS+L C+ + + G +HA + K D+ + N ++++YAK G+ A++ FDEM
Sbjct: 319 LSSVLCLCASVASARFGTQIHAYMCKKQPMGDIALDNALVDMYAKAGEFSDAKRAFDEMP 378
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
RN++SW+++I+ + G A+ F++M + PN+ F S +SAC KG +
Sbjct: 379 YRNVISWTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLLSACGHCGLTNKGME 438
Query: 122 IHAYSL-KFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALI 173
+ ++G + +S I + + G DA LV +PN A++
Sbjct: 439 YFTSMMSRYGIDPRAEHYSSAIDLLARGGQLEDAWKLVQKTNLKPNSSMLGAML 492
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 2/165 (1%)
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN-QDVGVGNALVNMYAKCGLISC 356
G +P ++S+L C + + GK +H + + D+ + LV YA+ G ++
Sbjct: 6 GAKPTAPLYSSLLQCCISSCAFRQGKSVHGRVAAASASPPDLHLSTKLVIFYARFGDVAA 65
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ K+F+ M HR+VVSW +++ +A + AL+LF M+A+G +P+ T+ +AC
Sbjct: 66 ARKVFDGMPHRSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAG 125
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
AG + GE K + D+ + L+D+ R G + +A +
Sbjct: 126 AGCARSGEQVHACAAKGR-FAGDMFVQSALMDMHLRCGSVEDARQ 169
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 192/614 (31%), Positives = 328/614 (53%), Gaps = 45/614 (7%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKC--GKMILARKVF 60
KS L +C L+Q + + + ++G++ D N ++ A G + A K+F
Sbjct: 98 KSCIECLRNCKSMDQLKQ---IQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIF 154
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLV 117
+ + + +L ++ M+ + + G L F Q+ L P+ + + + A ++ +
Sbjct: 155 NYVQDPSLFVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVR 214
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+G+++ + +K G ++V NSLI MY ++ +A ++ E + VS+N +I+G+V
Sbjct: 215 QGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYV 274
Query: 178 ENQQPEKGFEVFKLMLRQG-LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
++ E F+ M ++G PD + L C+ +L G +H V+ +L
Sbjct: 275 RCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY-VRKELGFTT 333
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD-------------- 282
+ N ++ +Y+K + A F + K++I W + I+ +C D
Sbjct: 334 RIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVR 393
Query: 283 -----------------YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
++ +++F+EM ++PD FT ++L CA L +++ GK I
Sbjct: 394 DVVLWTAMINGYVQFHHFDDAVALFREMQI-QKIKPDKFTVVTLLTGCAQLGALEQGKWI 452
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
H +L R+ DV VG AL+ MY+KCG + S ++F E+ ++ SW +II A +
Sbjct: 453 HGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKT 512
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
AL+LF +M+ G KPD +TFIG+L+AC+H GLV+EG +FNSM+K + I P +EH+ C
Sbjct: 513 SEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGC 572
Query: 446 LIDLLGRAGKLLEAEEYTKKFPLGQDPIVL---GTLLSACRLRRDVVIGERLAKQLFHLQ 502
+IDLLGRAG L EAEE ++ P+ IV+ G LLSACR+ +V +GERLAK+L +++
Sbjct: 573 VIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIE 632
Query: 503 PTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
+S + LL+N+YAS W D R+ +K+ G+KK P S+IEV G +F V + SH
Sbjct: 633 SCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSH 692
Query: 563 SKIGEINYMLKTLS 576
++ EI ML ++
Sbjct: 693 PEMIEICSMLNRVT 706
>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 670
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 178/537 (33%), Positives = 298/537 (55%), Gaps = 6/537 (1%)
Query: 16 KALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMI 75
K G ++HA V ++G D+ V + ++N Y + ARKVF+EM ER++VSW+ MI
Sbjct: 136 KGRATGDAVHALVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMI 195
Query: 76 SGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYA 132
S Q G+ L +M PN+ S +SAC ++++ KG ++A ++G
Sbjct: 196 SAFAQCGQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIE 255
Query: 133 SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM 192
+ + N+LI MY+K G SDA + N S+N LI GFV+N + ++ +F+ M
Sbjct: 256 ADVDIRNALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEM 315
Query: 193 LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI 252
L G++PD + L + DL++G LH ++ + + N+++ +Y+K +
Sbjct: 316 LSDGVIPDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDM 375
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
AE F + +D++SW + + ++F +M V + S+L+A
Sbjct: 376 AAAEIIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKV-RDVMASEMALVSLLSA 434
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
C+ L ++ G++IH+++ + D+ + +ALV+MYAKCG I + ++F+ M H+ ++W
Sbjct: 435 CSQLGALDKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAW 494
Query: 373 NTIIAAHANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
N +I A+ G A+ LFEQ+ K KPD++T +L AC H G+V EG YFN M
Sbjct: 495 NAMIGGLASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLM- 553
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
T GI PD EH+ C++DLLGRAG L EA + +K P+ +P++ G+LL+ACR+ + +G
Sbjct: 554 LTLGIVPDNEHYGCIVDLLGRAGLLDEAYNFIQKMPIQPNPVIWGSLLAACRVHHRMELG 613
Query: 492 ERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEV 548
+ + + + L P +VL+SNL+A +G W DV R M+ ++K P +S I+V
Sbjct: 614 KIIGQHIIDLAPNDVGAHVLISNLHAEEGQWDDVEQVRGMMGSRRVEKSPGHSSIQV 670
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 136/519 (26%), Positives = 246/519 (47%), Gaps = 15/519 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKC---GKMILARKVFDE 62
SLL H + LH +++ + D V+ ++ L A M ARKVFD
Sbjct: 19 DSLLAHLDACASRANLAELHGRLVRAHLGSDPCVAGRLVTLLASPVSRHDMPYARKVFDR 78
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSL--- 116
M++ + W+ MI G++ + ALE F M + P+ Y A+ + A S
Sbjct: 79 MAQPTAIVWNCMIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWKGR 138
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G +HA + G+AS FV + LI+ Y DA V+ E E ++VS+ +I+ F
Sbjct: 139 ATGDAVHALVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAF 198
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
+ Q + M +G P++ + L C + KG+ ++ + +E++
Sbjct: 199 AQCGQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADV 258
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
+ N ++ +Y K + +A K F+ + ++ SWNT I +++ L++F+EM +D
Sbjct: 259 DIRNALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSD 318
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
GV PD T S+L+ A L +Q G+ +H ++ ++ D+ + N+L+NMYAKCG ++
Sbjct: 319 -GVIPDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAA 377
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ +F M R++VSW ++ + +A LF+ MK + + + LL+AC+
Sbjct: 378 AEIIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQ 437
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQD---PI 473
G + +G +S K + D+ + L+D+ + G + A E + Q
Sbjct: 438 LGALDKGRE-IHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNA 496
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLL 512
++G L S + + V + E+L K L +P + V+L
Sbjct: 497 MIGGLASQGQGKEAVALFEQLLK-LRDPKPDAITLKVVL 534
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 189/386 (48%), Gaps = 5/386 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I SLL C + +A+ +G+ ++A V + GI+ DV + N ++ +Y KCG M A K F M
Sbjct: 225 TIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNALIGMYVKCGCMSDAWKTFKGM 284
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
RN SW+ +I G Q G+H AL F +M ++P+ S +S A + L +G+
Sbjct: 285 PIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDVITLVSVLSTYAQLGDLQQGR 344
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H Y + NSLI+MY K G + A +++ ++VS+ A++ G+V+
Sbjct: 345 YLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFENMARRDIVSWTAMVCGYVKGL 404
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
Q F +F M + ++ + L CS L KG +H + + ++ ++ +
Sbjct: 405 QFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDKGREIHSYIKEKSVRTDMWLES 464
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y+K I A + F + K ++WN I + ++ +++F+++ +
Sbjct: 465 ALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQGQGKEAVALFEQLLKLRDPK 524
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD T +L AC + V G ++ + + D +V++ + GL+ +Y
Sbjct: 525 PDAITLKVVLCACTHVGMVDEGLHYFNLMLTLGIVPDNEHYGCIVDLLGRAGLLDEAYNF 584
Query: 361 FNEM-LHRNVVSWNTIIAA-HANHRL 384
+M + N V W +++AA +HR+
Sbjct: 585 IQKMPIQPNPVIWGSLLAACRVHHRM 610
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 184/559 (32%), Positives = 312/559 (55%), Gaps = 4/559 (0%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
LH+ ++K+G + V ++N Y+ CG + AR VF+ + +++V W+ ++S + + G
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 84 HLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
+L+ S M + +PN Y F +A+ A G+ + + +H LK Y VG
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG 287
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
L+ +Y ++G SDA V+ E + ++V ++ +IA F +N + ++F M ++P+
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
F+ + L C++ G LH L VK + + +V N ++ +Y+K + A K F
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFA 407
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ K+ +SWNT I + + K S+F+E + V + TF+S L ACA LAS+
Sbjct: 408 ELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQ-VSVTEVTFSSALGACASLASMD 466
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G Q+H I+ + V V N+L++MYAKCG I + +FNEM +V SWN +I+ ++
Sbjct: 467 LGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYS 526
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
H LG AL++ + MK KP+ +TF+G+L+ C++AGL+ +G+ F SM + +GI P +
Sbjct: 527 THGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCL 586
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH 500
EH+TC++ LLGR+G+L +A + + P ++ +LSA + + R A+++
Sbjct: 587 EHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILK 646
Query: 501 LQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEF 560
+ P + YVL+SN+YA W +VA RK +K+ G+KKEP S IE QG F+V
Sbjct: 647 INPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLS 706
Query: 561 SHSKIGEINYMLKTLSLAA 579
H + IN ML+ L++ A
Sbjct: 707 DHPDMKLINGMLEWLNMKA 725
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 198/410 (48%), Gaps = 6/410 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
++L C + ++H +LK G D+ +N +LN Y K G A +FDEM ER
Sbjct: 54 AMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPER 113
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYS 126
N VS+ + G+ L + H L N ++F S + + +H+
Sbjct: 114 NNVSFVTLAQGYACQDPIGLYSRLHREGHEL-NPHVFTSFLKLFVSLDKAEICPWLHSPI 172
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
+K GY S +FVG +LI+ Y G A V+ ++V + +++ +VEN E
Sbjct: 173 VKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSL 232
Query: 187 EVFKLMLRQGLLPDRFSFAGGLE--ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
++ M G +P+ ++F L+ I + D KG +H +K +P VG ++
Sbjct: 233 KLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKG--VHGQILKTCYVLDPRVGVGLLQ 290
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
LY++ + +A K F + + D++ W+ IA + + +F M + V P++F
Sbjct: 291 LYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM-REAFVVPNEF 349
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T +SIL CA G+Q+H ++++ + D+ V NAL+++YAKC + + KLF E+
Sbjct: 350 TLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAEL 409
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+N VSWNT+I + N GG A +F + + VTF L AC
Sbjct: 410 SSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGAC 459
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 137/280 (48%), Gaps = 9/280 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+L+ C+ K G LH V+K+G D+ VSN ++++YAKC KM A K+F E+
Sbjct: 350 TLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAEL 409
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
S +N VSW+ +I G+ GE A F + + E F+SA+ ACA + S+ G
Sbjct: 410 SSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGV 469
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H ++K A V NSLI MY K G A V+ E ++ S+NALI+G+ +
Sbjct: 470 QVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHG 529
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ + +M + P+ +F G L CS + + +G C +
Sbjct: 530 LGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQ--ECFESMIRDHGIEPCLE 587
Query: 241 TIMALYSKFNLIGEAEKAFRLIE----EKDLISWNTFIAA 276
+ G+ +KA +LIE E ++ W ++A
Sbjct: 588 HYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 173/396 (43%), Gaps = 12/396 (3%)
Query: 87 ALEFFSQMHLLP--NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISM 144
AL+ S ++P + + + + + C + + IH LK G F N L++
Sbjct: 34 ALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNA 93
Query: 145 YMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSF 204
Y+K G+ DAL ++ E E N VSF L G+ Q P ++ + R+G + F
Sbjct: 94 YVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA-CQDP---IGLYSRLHREGHELNPHVF 149
Query: 205 AGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE 264
L++ + LH VK +SN FVG ++ YS + A F I
Sbjct: 150 TSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILC 209
Query: 265 KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ 324
KD++ W ++ +E L + M G P+++TF + L A GL + K
Sbjct: 210 KDIVVWAGIVSCYVENGYFEDSLKLLSCMRM-AGFMPNNYTFDTALKASIGLGAFDFAKG 268
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
+H +++ D VG L+ +Y + G +S ++K+FNEM +VV W+ +IA +
Sbjct: 269 VHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGF 328
Query: 385 GGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFT 444
A+ LF +M+ + P+ T +L C GE + K G DI
Sbjct: 329 CNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKV-GFDLDIYVSN 387
Query: 445 CLIDLLGRAGKLLEA----EEYTKKFPLGQDPIVLG 476
LID+ + K+ A E + K + + +++G
Sbjct: 388 ALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVG 423
>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 193/578 (33%), Positives = 318/578 (55%), Gaps = 7/578 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S S+L + ++ G +H+ ++KMG + +V + +L++YAKC ++ A +VF +
Sbjct: 102 SFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSI 161
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEY---IFASAISACAGIQSLVKGQ 120
+ RN V+W+A+ISG+ Q G+ A M L E FA ++
Sbjct: 162 NIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTT 221
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEP-NLVSFNALIAGFVEN 179
Q+HA +K G AS + V N++I+ Y + G DA V+ A E +LV++N+++A ++ N
Sbjct: 222 QVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVN 281
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
Q E+ F++F M G PD +++ + + +G LH L +K LE +
Sbjct: 282 NQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPIS 341
Query: 240 NTIMALY--SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
N+++A+Y S + EA F +E KD +SWN+ + S E L F+ M + +
Sbjct: 342 NSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQY 401
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
V D + F+++L +C+ LA++Q G+Q+H +++ + V ++L+ MY+KCG+I +
Sbjct: 402 -VVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDA 460
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
K F+ + ++WN++I +A H G AL LF MK +K D +TF+ +LTAC+H
Sbjct: 461 RKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHI 520
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV+EG ++ SME YGI P +EH+ C+IDLLGRAG+L EA+ + P D +V T
Sbjct: 521 GLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKT 580
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL ACR D+ + ++A L L+P YVLLS+++ W + A ++++K+ G+
Sbjct: 581 LLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGV 640
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KK P +S IEV+ F + SH EI L L
Sbjct: 641 KKVPGWSWIEVKNEVRSFNAEDRSHPNCEEIYLRLGEL 678
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 136/467 (29%), Positives = 229/467 (49%), Gaps = 10/467 (2%)
Query: 9 LHHCSKTK--ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
LH S++ AL + H +K G + +N++++ YAKCG++ +A K+F E S+R
Sbjct: 4 LHSLSQSSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQR 63
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
+ VSW+ MI+G G ALEF M + Y F S + A + + GQQ+H
Sbjct: 64 DAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVH 123
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ +K GY F G++L+ MY K DA V+ N V++NALI+G+ +
Sbjct: 124 SMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRG 183
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
F + M +G+ D +FA L + + + +H VK L S+ V N I+
Sbjct: 184 TAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAII 243
Query: 244 ALYSKFNLIGEAEKAFR-LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
YS+ I +AE+ F IE +DL++WN+ +AA E+ +F EM G PD
Sbjct: 244 TAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEM-QVLGFEPD 302
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC--SYKL 360
+T+ S+++A + GK +H +I+ L V + N+L+ MY K S + +
Sbjct: 303 IYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNI 362
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F + +++ VSWN+I+ + L ALK FE M++ + D F +L +C+ +
Sbjct: 363 FESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATL 422
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+ G+ + K+ G P+ + LI + + G + +A + P
Sbjct: 423 QLGQQVHVLVLKS-GFEPNGFVASSLIFMYSKCGVIEDARKSFDATP 468
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 134/276 (48%), Gaps = 24/276 (8%)
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
L + + HCL +K ++ + N I++ Y+K I A K F ++D +SWNT IA
Sbjct: 15 LYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAG 74
Query: 277 CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
+ ++E L K M +G D ++F SIL A + V+ G+Q+H+ +++M
Sbjct: 75 FVNLGNFETALEFLKSMKR-YGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEG 133
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
+V G+AL++MYAKC + ++++F + RN V+WN +I+ +A G+A L + M+
Sbjct: 134 NVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCME 193
Query: 397 ATGIKPDSVTFIGL-----------LTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
G++ D TF L LT HA +VK +G++ D
Sbjct: 194 LEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVK------------HGLASDTTVCNA 241
Query: 446 LIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+I G + +AE +D + ++L+A
Sbjct: 242 IITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAA 277
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 188/579 (32%), Positives = 318/579 (54%), Gaps = 12/579 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+L + + G +HA +K G V V N ++N+YAKCG + AR VF M
Sbjct: 159 TFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRM 218
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFF----SQMHLLPNEYIFASAISACAGIQSLVKG 119
R++VSW+ +++G G L AL+ F S + +L E +++ I+ CA ++ L
Sbjct: 219 ETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITML-TESTYSTVINLCANLKHLGLA 277
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG-EAFEPNLVSFNALIAGFVE 178
+Q+H+ LK G+ S V +L+ Y K G AL V+ + N+VS+ A+I G ++
Sbjct: 278 RQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQ 337
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N +F M G+ P+ +++ L + S + +H +K E P V
Sbjct: 338 NGDIPLAAALFSRMREDGVAPNDLTYSTILTVSEASFPPQ----IHAQVIKTNYECTPTV 393
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
G +M YSK EA F++I++KD++SW+ + + D + F +M+ HG
Sbjct: 394 GTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTM-HG 452
Query: 299 VRPDDFTFASILAACAGLAS-VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
++P++FT +S + ACA A+ V G+Q HA I+ R + + V +ALV+MYA+ G I +
Sbjct: 453 LKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENA 512
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+F R+++SWN++++ +A H AL +F QM+ GI D +TF+ ++ C HA
Sbjct: 513 QCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHA 572
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV+EG+ YF+ M + YGI+P ++H+ C++DL RAGKL E + P P +
Sbjct: 573 GLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRA 632
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL ACR+ ++V +G+ A++L L+P ++ YVLLSN+Y++ G W + RK++ +
Sbjct: 633 LLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKV 692
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
+KE S I+++ F ++ SH +I L+ ++
Sbjct: 693 RKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMT 731
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 199/402 (49%), Gaps = 16/402 (3%)
Query: 21 GISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHH 79
G LHA ++ G D+ V ++++Y ++ RKVF+ M +RN+V+W+++++G+
Sbjct: 74 GKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYI 133
Query: 80 QAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF 136
QAG L + F +M + PN + F+S +S A + GQ +HA S+KFG S F
Sbjct: 134 QAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVF 193
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
V NSL++MY K G +A +V+ ++VS+N L+AG V N + + ++F
Sbjct: 194 VCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSI 253
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
+ +++ + +C+ L LH +K S GN + AL +N G+ +
Sbjct: 254 TMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHS---YGNVMTALMDAYNKAGQLD 310
Query: 257 KA---FRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
KA F L+ ++++SW I C D ++F M D GV P+D T+++IL
Sbjct: 311 KALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMRED-GVAPNDLTYSTILT- 368
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
++ QIHA +I+ VG AL+ Y+K + +F + ++VVSW
Sbjct: 369 ---VSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSW 425
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ ++ +A A F +M G+KP+ T + AC
Sbjct: 426 SAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDAC 467
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 157/339 (46%), Gaps = 13/339 (3%)
Query: 164 PNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMIL 223
P + F+ GFV +Q + + + RQG + G ++IC D G L
Sbjct: 22 PWTMPFSTTWQGFV-HQALDHFLDAHR---RQGRCVGGGALLGIIKICGSVPDRVLGKQL 77
Query: 224 HCLTVKCKLESNPF-VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
H L V+C + VG +++ +Y ++ + + K F + ++++++W + +
Sbjct: 78 HALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGV 137
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
+S+F M + GV P+ FTF+S+L+ A V G+ +HA I+ V V N
Sbjct: 138 LLDVMSLFFRMRAE-GVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCN 196
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
+L+NMYAKCGL+ + +F M R++VSWNT++A + AL+LF +++
Sbjct: 197 SLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITML 256
Query: 403 DSVTFIGLLTAC---NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
T+ ++ C H GL ++ +S +G T L+D +AG+L +A
Sbjct: 257 TESTYSTVINLCANLKHLGLARQ----LHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKA 312
Query: 460 EEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQL 498
+ Q+ + ++ C D+ + L ++
Sbjct: 313 LDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRM 351
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 182/572 (31%), Positives = 303/572 (52%), Gaps = 4/572 (0%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L CS L G +HA V+ G D + ++++Y K G M AR+VFD + R
Sbjct: 163 SVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIR 222
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
++ +++ M+ G+ ++G+ A E F +M L PN+ F S + C ++L G+ +H
Sbjct: 223 DVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVH 282
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A + G V SLI MY G A V+ ++VS+ +I G+ EN E
Sbjct: 283 AQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIE 342
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
F +F M +G+ PDR ++ + C++S +L +H ++ V ++
Sbjct: 343 DAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALV 402
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K I +A + F + +D++SW+ I A + F M + + PD
Sbjct: 403 HMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSN-IEPDG 461
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T+ ++L AC L ++ G +I+ I+ L V +GNAL+ M AK G + + +F+
Sbjct: 462 VTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDT 521
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M+ R+V++WN +I ++ H AL LF++M +P+SVTF+G+L+AC+ AG V EG
Sbjct: 522 MVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEG 581
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
+F + + GI P ++ + C++DLLGRAG+L EAE K P+ + +LL ACR
Sbjct: 582 RRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACR 641
Query: 484 LRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSY 543
+ ++ + ER A++ + P + YV LS++YA+ GMW +VA RK+++ G++KE
Sbjct: 642 IHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGC 701
Query: 544 SMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ IEV G F V + SH +GEI L L
Sbjct: 702 TWIEVAGKVHTFVVEDRSHPLVGEIYAELARL 733
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 226/425 (53%), Gaps = 4/425 (0%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+++ L C++ + G + +++ G Q ++ N ++ LY+ CG + AR++FD
Sbjct: 57 SRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFD 116
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
+ + +V+W+A+I+G+ Q G A F QM L P+ F S + AC+ L
Sbjct: 117 SVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNW 176
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+++HA + G+ S +G +L+SMY+K G DA V+ ++ +FN ++ G+ +
Sbjct: 177 GKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAK 236
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ EK FE+F M + GL P++ SF L+ C L G +H + L + V
Sbjct: 237 SGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRV 296
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
+++ +Y+ I A + F ++ +D++SW I + + E +F M + G
Sbjct: 297 ATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATM-QEEG 355
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
++PD T+ I+ ACA A++ H ++IH+ + D+ V ALV+MYAKCG I +
Sbjct: 356 IQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDAR 415
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
++F+ M R+VVSW+ +I A+ + G A + F MK + I+PD VT+I LL AC H G
Sbjct: 416 QVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLG 475
Query: 419 LVKEG 423
+ G
Sbjct: 476 ALDVG 480
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 1/160 (0%)
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D T+ + C L GKQ+ H+I+ ++ N L+ +Y+ CG ++ + ++F
Sbjct: 56 DSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIF 115
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ + ++ VV+WN +IA +A A LF QM G++P +TF+ +L AC+ +
Sbjct: 116 DSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLN 175
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
G+ ++ T G D T L+ + + G + +A +
Sbjct: 176 WGKE-VHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQ 214
>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g13880-like [Cucumis sativus]
Length = 839
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 177/567 (31%), Positives = 318/567 (56%), Gaps = 11/567 (1%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
CS++ L G +H +L G+ V+++N ++++Y+KCG++ AR +FD + + VSW
Sbjct: 170 CSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSW 229
Query: 72 SAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK--GQQIHAYS 126
+++I+G+ Q G++ L +MH L N Y SA+ AC+ + K G +H ++
Sbjct: 230 NSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHA 289
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE--- 183
+K G VG +L+ MY K G DA+ ++ + + N+V +NA++AG ++ + E
Sbjct: 290 IKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKC 349
Query: 184 --KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
K +F M G+ P F+++ L+ C + D + +H L K L S+ ++G+
Sbjct: 350 AYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSI 409
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ LYS + +A F I ++ I ++E LS+F E+ + +P
Sbjct: 410 LIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLT-YEEKP 468
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D+F ++I+++CA + ++ G+QI H ++ +++ N+ + MYAK G + + F
Sbjct: 469 DEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTF 528
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+M + ++VSW+T+I ++A H AL+ FE MK+ GI+P+ F+G+L AC+H GLV+
Sbjct: 529 QQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVE 588
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
EG YF++MEK Y + ++H C++DLLGRAG+L +AE + +P++ LLSA
Sbjct: 589 EGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSA 648
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
CR+ +D V +R+A+++ L+P ++ YVLL N+Y G + R ++++ +KKEP
Sbjct: 649 CRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRIKKEP 708
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEI 568
S I++ F + SH G+I
Sbjct: 709 GLSWIQIGDKVYSFVSGDRSHKNSGQI 735
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 229/427 (53%), Gaps = 11/427 (2%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
L+ +KT L G +H+ ++K +P + + N++LN+Y KCG A K+FD+MS+ N
Sbjct: 65 LVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSN 124
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQQIHA 124
+V+++++ISG+ Q + F + L ++Y A A++AC+ +L G+ IH
Sbjct: 125 IVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHG 184
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
L +G S + NSLI MY K G A +++ + + + VS+N+LIAG+V+N + E+
Sbjct: 185 LILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEE 244
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRK--GMILHCLTVKCKLESNPFVGNTI 242
+ + M + GL + ++ L+ CS + + K G +LH +K L + VG +
Sbjct: 245 LLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTAL 304
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYE-----KGLSVFKEMSNDH 297
+ +Y+K + +A + F + +K+++ +N +A E K L++F EM +
Sbjct: 305 LDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKS-C 363
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G++P FT++S+L AC + + KQ+HA + + L D +G+ L+++Y+ G + +
Sbjct: 364 GIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDA 423
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
FN + + +V +I + + SAL LF ++ KPD ++++C +
Sbjct: 424 LLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANM 483
Query: 418 GLVKEGE 424
G+++ GE
Sbjct: 484 GMLRSGE 490
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 186/348 (53%), Gaps = 9/348 (2%)
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ +H++ +K + F+ N+L++MY K G + A ++ + + N+V++N+LI+G+V+
Sbjct: 78 GKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQ 137
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+K +F R GL D+++ AG L CS S +L G ++H L + L S +
Sbjct: 138 MSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVL 197
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N+++ +YSK + A F ++ D +SWN+ IA YE+ L++ ++M + +G
Sbjct: 198 TNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKM-HQNG 256
Query: 299 VRPDDFTFASILAACAG--LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
+ + +T S L AC+ G +H H I++ L+ DV VG AL++MYAK G +
Sbjct: 257 LAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDD 316
Query: 357 SYKLFNEMLHRNVVSWNTIIAA-----HANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
+ ++F++M+ +NVV +N ++A + AL LF +MK+ GIKP T+ LL
Sbjct: 317 AIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLL 376
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
AC K + M K G+ D + LIDL G +++A
Sbjct: 377 KACIIVEDFKFAKQVHALMCKN-GLLSDEYIGSILIDLYSVLGSMMDA 423
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 136/279 (48%), Gaps = 5/279 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SSLL C + + +HA + K G+ D + + +++LY+ G M+ A F+ +
Sbjct: 371 TYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSI 430
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
+V +AMI G+ Q GE AL F ++ P+E+I ++ +S+CA + L G+
Sbjct: 431 HNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGE 490
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QI ++ K G + + NS I MY K G A L + + P++VS++ +I ++
Sbjct: 491 QIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHG 550
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVG 239
+ F+LM G+ P+ F+F G L CS + +G+ + K++ +
Sbjct: 551 HAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHC 610
Query: 240 NTIMALYSKFNLIGEAEK-AFRLIEEKDLISWNTFIAAC 277
++ L + + +AE RL E + + W ++AC
Sbjct: 611 VCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSAC 649
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 196/610 (32%), Positives = 322/610 (52%), Gaps = 41/610 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD-- 61
S L C + L+ G SLHA +K + +SNH L LY+KC ++ AR+VFD
Sbjct: 10 SFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69
Query: 62 -----------------------------EMSERNLVSWSAMISGHHQAGEHLLALEFFS 92
EM + + VS++ +I+ + + G+ A + F
Sbjct: 70 HDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFL 129
Query: 93 QMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
+M L + + + I+AC L++ Q+HA S+ G S VGN+LI+ Y K G
Sbjct: 130 EMREAFLDMDGFTLSGIITACGINVGLIR--QLHALSVVTGLDSYVSVGNALITSYSKNG 187
Query: 150 YSSDALLVYGEAFEP-NLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGL 208
+ +A ++ E + VS+N+++ ++++++ K E++ M +GL+ D F+ A L
Sbjct: 188 FLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVL 247
Query: 209 EICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN-LIGEAEKAFRLIEEKDL 267
+ DL G+ H +K N VG+ ++ LYSK + + K F I DL
Sbjct: 248 TAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDL 307
Query: 268 ISWNTFIAACSHCADY-EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
+ WNT I+ S D ++ L F+++ G RPDD + +++AC+ ++S G+Q+H
Sbjct: 308 VLWNTMISGYSLYEDLSDEALECFRQLQGV-GHRPDDCSLVCVISACSNMSSPSQGRQVH 366
Query: 327 AHLIRMRLNQD-VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
+++ + + + V NAL+ MY+KCG + + LF+ M N VS+N++IA +A H +G
Sbjct: 367 GLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMG 426
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
+L LF++M P ++TFI +L AC H G V++G+ YFN M++ +GI P+ HF+C
Sbjct: 427 FQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSC 486
Query: 446 LIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTT 505
+IDLLGRAGKL EAE + P LL ACR+ +V + + A +L L P
Sbjct: 487 MIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLN 546
Query: 506 TSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKI 565
+PYV+L+N+Y+ +G D A RK+++D G+KK+P S IEV F + H I
Sbjct: 547 AAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMI 606
Query: 566 GEINYMLKTL 575
+I L+ +
Sbjct: 607 KKIQEYLEEM 616
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 181/572 (31%), Positives = 313/572 (54%), Gaps = 1/572 (0%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVL-KMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+++L C+ KAL++G ++H+ + G++ DVI+ N +L +YAKCG + A+++F+ MS
Sbjct: 125 TTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMS 184
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHA 124
R++ SW+AMI+ + Q+G A+ + M + P+ F S +SAC+ + L +G++IHA
Sbjct: 185 GRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVEPSVRTFTSVLSACSNLGLLDQGRKIHA 244
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
G + N+L++MY + DA ++ ++VS++A+IA F E ++
Sbjct: 245 LISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDE 304
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
E + M +G+ P+ ++FA L C+ DLR G +H + + G ++
Sbjct: 305 AIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVD 364
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
LY+ + + EA F IE +D W I S L +++EM N V
Sbjct: 365 LYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKI 424
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
++ +++ACA L + +Q H+ + + D + +LVNMY++ G + + ++F++M
Sbjct: 425 IYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKM 484
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
R+ ++W T+IA +A H G AL L+++M+ G +P +TF+ +L AC+HAGL ++G+
Sbjct: 485 SSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGK 544
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRL 484
F S++ Y + P+I H++C+IDLL RAG+L +AEE P+ + + +LL A R+
Sbjct: 545 QLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRI 604
Query: 485 RRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYS 544
+DV A Q+ L P + YVLLSN++A G +A R + G+KK S
Sbjct: 605 HKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSS 664
Query: 545 MIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
IEV +F V + SH + EI L+ LS
Sbjct: 665 WIEVADQIHEFNVGDNSHPRFQEIFAELQRLS 696
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 232/449 (51%), Gaps = 12/449 (2%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH 95
+V + N ++ Y KCG + AR FD ++ +N SW +M++ + Q G + AL+ + +M
Sbjct: 57 NVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRMD 116
Query: 96 LLPNEYIFASAISACAGIQSLVKGQQIHAY-SLKFGYASISFVGNSLISMYMKVGYSSDA 154
L PN ++ + + ACA I++L +G+ IH+ S G + NSL++MY K G DA
Sbjct: 117 LQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDA 176
Query: 155 LLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVS 214
++ ++ S+NA+IA + ++ E+ +++ M + P +F L CS
Sbjct: 177 KRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNL 233
Query: 215 NDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFI 274
L +G +H L E + + N ++ +Y++ + +A K F+ + +D++SW+ I
Sbjct: 234 GLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMI 293
Query: 275 AACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRL 334
AA + +++ + + +M + GVRP+ +TFAS+L ACA + ++ G+ +H ++
Sbjct: 294 AAFAETDLFDEAIEFYSKMQLE-GVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGY 352
Query: 335 NQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN--HRLGGSALKLF 392
+ G ALV++Y G + + LF+++ +R+ W +I ++ HR G L+L+
Sbjct: 353 KITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTG--VLELY 410
Query: 393 EQMKATGIKPDS-VTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLG 451
+MK T P + + + +++AC G + + +E G+ D T L+++
Sbjct: 411 REMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEAD-GMISDFVLATSLVNMYS 469
Query: 452 RAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
R G L A + K +D + TL++
Sbjct: 470 RWGNLESARQVFDKMS-SRDTLAWTTLIA 497
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 189/387 (48%), Gaps = 7/387 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++ +S+L CS L QG +HA + G + D+ + N +L +YA+C + A K+F
Sbjct: 221 RTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQR 280
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKG 119
+ R++VSWSAMI+ + A+EF+S+M L PN Y FAS + ACA + L G
Sbjct: 281 LPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAG 340
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ +H L GY G +L+ +Y G +A ++ + + + LI G+ +
Sbjct: 341 RAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQ 400
Query: 180 QQPEKGFEVFKLMLRQGLLP-DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
E+++ M +P + ++ + C+ H + S+ +
Sbjct: 401 GHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVL 460
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
+++ +YS++ + A + F + +D ++W T IA + ++ L ++KEM + G
Sbjct: 461 ATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELE-G 519
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHL-IRMRLNQDVGVGNALVNMYAKCGLISCS 357
P + TF +L AC+ + GKQ+ + ++ ++ + ++++ ++ G +S +
Sbjct: 520 AEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDA 579
Query: 358 YKLFNEM-LHRNVVSWNTIIAAHANHR 383
+L N M + N V+W++++ A H+
Sbjct: 580 EELINAMPVEPNDVTWSSLLGASRIHK 606
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 132/249 (53%), Gaps = 10/249 (4%)
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
+N F+GN I+ Y K + A AF I K+ SW + + A + Y L ++K M
Sbjct: 56 ANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM 115
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCG 352
++P+ + ++L ACA + +++ GK IH+ + + L DV + N+L+ MYAKCG
Sbjct: 116 D----LQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCG 171
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
+ + +LF M R+V SWN +IAA+A A++L+E M ++P TF +L+
Sbjct: 172 SLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDMD---VEPSVRTFTSVLS 228
Query: 413 ACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDP 472
AC++ GL+ +G +++ + G D+ L+ + R L +A + ++ P +D
Sbjct: 229 ACSNLGLLDQGRK-IHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPR-RDV 286
Query: 473 IVLGTLLSA 481
+ +++A
Sbjct: 287 VSWSAMIAA 295
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 193/582 (33%), Positives = 316/582 (54%), Gaps = 15/582 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVI---VSNHVLNLYAKCGKMILARKVF 60
S ++L+ CS ++AL G +H+ +L + D + V+ ++++Y KCG + A VF
Sbjct: 439 SFIAILNACSNSEALDFGRKIHSLILTR--RRDYVESSVATMLVSMYGKCGSISEAELVF 496
Query: 61 DEMS--ERNLVSWSAMISGHHQ---AGEHLLALEFFSQMHLLPNEYIFASAISACAGIQS 115
EM R+LV+W+ M+ + Q + E AL Q +LP+ F S +S+C Q
Sbjct: 497 KEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQ- 555
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
+ Q + L+ GY S + + +LISM+ + A V+ E ++VS+ A+++
Sbjct: 556 --EAQVLRMCILESGYRS-ACLETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSA 612
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
EN+ ++ +F+ M +G++PD+F+ A L+ C S L G ++H + LE++
Sbjct: 613 TAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEAD 672
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
V N ++ +YS EA F ++ +DL+SWN AA + ++ + +F++M
Sbjct: 673 IAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQL 732
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
+ GV+PD TF++ L G A V GK HA L+ DV V LV +YAKCG +
Sbjct: 733 E-GVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLD 791
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ LF VV N II A A H A+K+F +M+ G++PD T + +++AC
Sbjct: 792 EAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACG 851
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
HAG+V+EG + F +M++ +GISP +EH+ C +DLLGRAG+L AE+ +K P + +V
Sbjct: 852 HAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVW 911
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
+LL C+L+ D +GER A+++ L P ++ +V+LSN+Y + G W D RK + D
Sbjct: 912 TSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKMLDE 971
Query: 536 GLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
+K P S E+ +F + SH K EI +L L L
Sbjct: 972 NVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIYVVLDKLEL 1013
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 146/497 (29%), Positives = 251/497 (50%), Gaps = 36/497 (7%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
++LL C + L +G H + G++ + + N ++N+Y +CG + A +F +M E
Sbjct: 29 TALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEE 88
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHL----LPNEYIFASAISACAGIQSLVKGQQ 121
RN+VSW+A+IS + Q G A F M L PN Y + ++ACA + L G+
Sbjct: 89 RNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRS 148
Query: 122 IHAYSLKFGY----ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
IHA + G + + VGN++I+MY K G DA+ V+ E ++VS+ A+ +
Sbjct: 149 IHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYA 208
Query: 178 ENQQ--PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+ ++ P+ +F+ ML Q L P+ +F L C+ LR G LH L + L +
Sbjct: 209 QERRFYPD-ALRIFREMLLQPLAPNVITFITALGACT---SLRDGTWLHSLLHEASLGFD 264
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLI------EEKDLISWNTFIAACSHCADYEKGLSV 289
P N ++ +Y K G+ E A+ + +E DL+SWN I+A + +++
Sbjct: 265 PLASNALINMYGK---CGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAI 321
Query: 290 FKEMSNDHGVRPDDFTFASILAACA------GLASVQHGKQIHAHLIRMRLNQDVGVGNA 343
F+ + + G+RP+ T +IL A A G A HG+ + +R DV +GNA
Sbjct: 322 FRRLRLE-GMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLR-----DVVIGNA 375
Query: 344 LVNMYAKCGLISCSYKLFNEMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
+++MYAKCG S ++ +F + + +V+SWNT++ A + + G + F M GI P
Sbjct: 376 IISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDP 435
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
+ V+FI +L AC+++ + G + + + T L+ + G+ G + EAE
Sbjct: 436 NKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELV 495
Query: 463 TKKFPLGQDPIVLGTLL 479
K+ PL +V ++
Sbjct: 496 FKEMPLPSRSLVTWNVM 512
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/477 (27%), Positives = 228/477 (47%), Gaps = 31/477 (6%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
+A ++ + + +L+ G LH+ + + + D + SN ++N+Y KCG A VF
Sbjct: 229 LAPNVITFITALGACTSLRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVF 288
Query: 61 DEMSER---NLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACA--G 112
M+ R +LVSW+AMIS +AG H A+ F ++ L PN + ++A A G
Sbjct: 289 KAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASG 348
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGE-AFEPNLVSFNA 171
+ + H + GY +GN++ISMY K G+ S A V+ ++ +++S+N
Sbjct: 349 VD-FGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNT 407
Query: 172 LIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK 231
++ + + K F ML G+ P++ SF L CS S L G +H L + +
Sbjct: 408 MLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRR 467
Query: 232 ---LESNPFVGNTIMALYSKFNLIGEAEKAFR--LIEEKDLISWNTFIAACSHCADYEKG 286
+ES+ V ++++Y K I EAE F+ + + L++WN + A + ++
Sbjct: 468 RDYVESS--VATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEA 525
Query: 287 LSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRL----NQDVGVGN 342
EM GV PD +F S+L++C + Q A ++RM + + +
Sbjct: 526 FGALMEMLQG-GVLPDALSFTSVLSSC-------YCSQ-EAQVLRMCILESGYRSACLET 576
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
AL++M+ +C + + +FNEM H +VVSW +++A A +R LF +M+ G+ P
Sbjct: 577 ALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIP 636
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
D T L C + + G+ + + G+ DI L+++ G EA
Sbjct: 637 DKFTLATTLDTCLASTTLGLGKVIHACVTEI-GLEADIAVENALLNMYSNCGDWREA 692
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 183/393 (46%), Gaps = 13/393 (3%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+ + + +C L KG+ H G F+GN LI+MY++ G +A ++ +
Sbjct: 28 YTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLM-LRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
E N+VS+ ALI+ + + F +F+ M L P+ ++ L C+ S DL G
Sbjct: 88 ERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147
Query: 222 ILHCLTVKCKLE----SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC 277
+H + + LE + VGN ++ +Y+K + +A F I EKD++SW A
Sbjct: 148 SIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAY 207
Query: 278 SHCAD-YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
+ Y L +F+EM + P+ TF + L AC S++ G +H+ L L
Sbjct: 208 AQERRFYPDALRIFREMLL-QPLAPNVITFITALGAC---TSLRDGTWLHSLLHEASLGF 263
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHR---NVVSWNTIIAAHANHRLGGSALKLFE 393
D NAL+NMY KCG +Y +F M R ++VSWN +I+A G A+ +F
Sbjct: 264 DPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFR 323
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 453
+++ G++P+SVT I +L A +G+ F+ G D+ +I + +
Sbjct: 324 RLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKC 383
Query: 454 GKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRR 486
G A ++ D I T+L A R+
Sbjct: 384 GFFSAAWAVFRRIRWKCDVISWNTMLGASEDRK 416
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 171/346 (49%), Gaps = 21/346 (6%)
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDL 267
L+ C SNDL KG H L LE + F+GN ++ +Y + + EA F +EE+++
Sbjct: 32 LQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNV 91
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHA 327
+SW I+A + C + + ++F+ M + P+ +T ++L ACA + G+ IHA
Sbjct: 92 VSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHA 151
Query: 328 HLIRMRLNQDVG----VGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN-H 382
+ + L + VGNA++NMYAKCG + + +F + ++VVSW + A+A
Sbjct: 152 MIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQER 211
Query: 383 RLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSM--EKTYGISPDI 440
R AL++F +M + P+ +TFI L AC +++G + +S+ E + G P
Sbjct: 212 RFYPDALRIFREMLLQPLAPNVITFITALGACTS---LRDG-TWLHSLLHEASLGFDPLA 267
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFPLGQ--DPIVLGTLLSAC----RLRRDVVIGERL 494
+ LI++ G+ G A K Q D + ++SA R + I RL
Sbjct: 268 SN--ALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRL 325
Query: 495 AKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
+L ++P + + +L+ L AS +G G + +SG ++
Sbjct: 326 --RLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRD 369
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 193/564 (34%), Positives = 300/564 (53%), Gaps = 48/564 (8%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACA 111
A VF+ E NL+ W+ M+ G + + + LE + +M H+ PN Y F + +CA
Sbjct: 36 AVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHV-PNAYTFPFLLKSCA 94
Query: 112 GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA---------- 161
++ +G+QIHA +K G + SLISMY + G DA V+ +
Sbjct: 95 KSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTA 154
Query: 162 ---------------------FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
E ++VS+NA+I G+VEN E+ E+FK M+R + PD
Sbjct: 155 LITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPD 214
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCK-LESNPFVGNTIMALYSKFNLIGEAEKAF 259
+ L C+ S + G +H L S+ + N + LYSK + A F
Sbjct: 215 EGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLF 274
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+ KD++SWNT I +H Y++ L +F+EM G P+D T S+L ACA L ++
Sbjct: 275 EGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRS-GESPNDVTMLSVLPACAHLGAI 333
Query: 320 QHGKQIHAHLIRMRLNQDVGVGN------ALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
G+ IH + I RL GV N +L++MYAKCG I ++++FN M+H+++ SWN
Sbjct: 334 DIGRWIHVY-IDKRLK---GVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWN 389
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT 433
+I A H +A LF +M+ GI+PD +T +GLL+AC+H+GL+ G F S+ +
Sbjct: 390 AMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQD 449
Query: 434 YGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGER 493
Y I+P +EH+ C+IDLLG AG EAEE P+ D ++ +LL AC++ ++ + E
Sbjct: 450 YNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAES 509
Query: 494 LAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFE 553
A++L ++P + YVLLSN+YA+ G W DVA R++L G+KK P S IE+
Sbjct: 510 FAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVH 569
Query: 554 KFTVAEFSHSKIGEINYMLKTLSL 577
+F + + H + EI ML+ + +
Sbjct: 570 EFIIGDKLHPQSREIYRMLEEMDV 593
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 195/434 (44%), Gaps = 54/434 (12%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD------ 61
LL C+K+K ++G +HA V+K+G + D ++++YA+ G++ ARKVFD
Sbjct: 89 LLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRD 148
Query: 62 -------------------------EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM-- 94
++ER++VSW+AMI+G+ + + ALE F +M
Sbjct: 149 VVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMR 208
Query: 95 -HLLPNEYIFASAISACAGIQSLVKGQQIHA-YSLKFGYASISFVGNSLISMYMKVGYSS 152
++ P+E S +SACA S+ G++IH G+ S + N+ I +Y K G
Sbjct: 209 TNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVE 268
Query: 153 DALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
A ++ ++VS+N LI G+ ++ +F+ MLR G P+ + L C+
Sbjct: 269 IASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACA 328
Query: 213 VSNDLRKGMILHCLTVKC--KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
+ G +H K + + + +++ +Y+K I A + F + K L SW
Sbjct: 329 HLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSW 388
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
N I + +F M + G+ PDD T +L+AC+ + G+ I
Sbjct: 389 NAMIFGFAMHGRANAAFDLFSRMRKN-GIEPDDITLVGLLSACSHSGLLDLGRHIFK--- 444
Query: 331 RMRLNQDVGVGNAL------VNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAA---HA 380
+ QD + L +++ GL + ++ + M + + V W +++ A H
Sbjct: 445 --SVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHG 502
Query: 381 NHRLGGS-ALKLFE 393
N L S A KL E
Sbjct: 503 NLELAESFAQKLME 516
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 198/598 (33%), Positives = 307/598 (51%), Gaps = 33/598 (5%)
Query: 11 HCSKTKALQQGISLHAAVLKMGI---QPDVIVSNHVLNLYAKCGKMILARKVFDEMSER- 66
H + G HA LK G + N +L++YA+ G + A+ +F +
Sbjct: 181 HLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAF 240
Query: 67 -----NLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVK 118
++V+W+ MIS Q G A+E M L P+ FASA+ AC+ ++ L
Sbjct: 241 SPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLAL 300
Query: 119 GQQIHAYSLKFG-YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPN--LVSFNALIAG 175
G+++HA LK A+ SFV ++L+ MY + A V+ EP+ L +NA+I G
Sbjct: 301 GREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICG 360
Query: 176 FVENQQPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
+ + E+ E+F M + G P + +G L C+ S +H VK +
Sbjct: 361 YAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAG 420
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
N FV N +M +Y++ + A + F +I+ +D++SWNT I C + + EM
Sbjct: 421 NRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQ 480
Query: 295 ---------------NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG 339
H P++ T ++L CA LA+ GK+IH + +R L D+
Sbjct: 481 LPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIA 540
Query: 340 VGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG 399
VG+ALV+MYAKCG ++ S +F+ + RNV++WN +I A+ H LG A+ LF++M A G
Sbjct: 541 VGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGG 600
Query: 400 -IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLE 458
P+ VTFI L AC+H+GLV G F+ ME+ +G+ P + C++D+LGRAG+L E
Sbjct: 601 EATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDE 660
Query: 459 AEEYTKKFPLGQDPI-VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYA 517
A G+ + +LL ACRL R+V +GE A++LF L+P S YVLL N+Y+
Sbjct: 661 AYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEASHYVLLCNIYS 720
Query: 518 SDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ GMW R ++ G+ KEP S IE+ G +F E SH E++ + L
Sbjct: 721 AAGMWDKSVAVRVRMRRQGVAKEPGCSWIELDGAIHRFMAGESSHPASAEVHAHMDAL 778
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 124/484 (25%), Positives = 223/484 (46%), Gaps = 40/484 (8%)
Query: 23 SLHAAVLKMGI--QPDVIVSNHVLNLYAKCGKMILARKVFDEMSE--RNLVSWSAMISG- 77
SLHAA L+ + +P V N +L YA+CG + A +F + R+ VS++++IS
Sbjct: 84 SLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISAL 143
Query: 78 --HHQAGEHLLAL-EFFSQMHLLPNEYIFASAISACA---GIQSLVKGQQIHAYSLKFGY 131
Q L AL + ++ + + S + AC+ G G++ HA++LK G+
Sbjct: 144 CLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGF 203
Query: 132 ---ASISFVGNSLISMYMKVGYSSDALLVY---GEAFEP---NLVSFNALIAGFVENQQP 182
F N+L+SMY ++G DA ++ AF P ++V++N +I+ V+ +
Sbjct: 204 LDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRC 263
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK-CKLESNPFVGNT 241
+ EV M+ G+ PD +FA L CS L G +H + +K L +N FV +
Sbjct: 264 AEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASA 323
Query: 242 IMALYSKFNLIGEAEKAFRLIEE--KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ +Y+ + A + F ++ E + L WN I + E+ L +F M + G
Sbjct: 324 LVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGC 383
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
P + T + +L ACA + +H ++++ + + V NAL++MYA+ G + + +
Sbjct: 384 APSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARR 443
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK----------------ATGIKPD 403
+F + R+VVSWNT+I A +L +M+ A P+
Sbjct: 444 IFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPN 503
Query: 404 SVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYT 463
++T + LL C G+ + + + DI + L+D+ + G L +
Sbjct: 504 NITLMTLLPGCAALAAPARGKE-IHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVF 562
Query: 464 KKFP 467
+ P
Sbjct: 563 DRLP 566
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 203/426 (47%), Gaps = 42/426 (9%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLK-MGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+ +S L CS+ + L G +HA VLK + + V++ ++++YA K+ AR+VFD
Sbjct: 284 TFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDM 343
Query: 63 MSE--RNLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSL 116
+ E R L W+AMI G+ QAG ALE FS+M P+E + + ACA +
Sbjct: 344 VPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGF 403
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
+ +H Y +K G A FV N+L+ MY ++G A ++ ++VS+N LI G
Sbjct: 404 AGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGC 463
Query: 177 VENQQPEKGFEVFKLM------------LRQG----LLPDRFSFAGGLEICSVSNDLRKG 220
V + F++ M +G +P+ + L C+ +G
Sbjct: 464 VVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARG 523
Query: 221 MILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHC 280
+H V+ LES+ VG+ ++ +Y+K + + F + +++I+WN I A
Sbjct: 524 KEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMH 583
Query: 281 ADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI-HAHLIRMRLNQDVG 339
++ +++F EM+ P++ TF + LAAC+ V G ++ H + +D G
Sbjct: 584 GLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHG------MERDHG 637
Query: 340 VGNA------LVNMYAKCGLISCSYKLFNEML--HRNVVSWNTIIAA---HANHRLGG-S 387
V +V++ + G + +Y + M + V +W++++ A H N LG +
Sbjct: 638 VKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGEVA 697
Query: 388 ALKLFE 393
A +LFE
Sbjct: 698 AERLFE 703
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 182/552 (32%), Positives = 303/552 (54%), Gaps = 6/552 (1%)
Query: 30 KMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALE 89
++G + + N +++LY KC + A VF + +N+ SW+ M++ + +
Sbjct: 3 ELGWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWL 62
Query: 90 FFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYM 146
FF M L P E + +SAC + + G+ I L G S V +L+S+Y
Sbjct: 63 FFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYG 122
Query: 147 KVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAG 206
K+G+ +DA V+ ++V+++A++A + N P + +F+ M G+ P++ +
Sbjct: 123 KLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVS 182
Query: 207 GLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKD 266
GL+ C+ DLR G ++H ++S VG ++ LY K I A +AF I EK+
Sbjct: 183 GLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKN 242
Query: 267 LISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
+++W+ AA + + V M + G+ P+ TF S+L ACA +A+++ G++IH
Sbjct: 243 VVAWSAISAAYARNDRNRDAIRVLHRMDLE-GLAPNSTTFVSVLDACAAIAALKQGRRIH 301
Query: 327 A--HLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
H++ L DV V ALVNMY+KCG ++ + +F+++ H ++V WN++IA +A H
Sbjct: 302 ERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQ 361
Query: 385 GGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFT 444
AL+LFE+M+ G++P +TF +L AC+HAG++ +G +F S +GI P+ EHF
Sbjct: 362 TEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFG 421
Query: 445 CLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPT 504
C++DLLGRAG ++++E+ P P+ L ACR R++ A+ LF L P
Sbjct: 422 CMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPR 481
Query: 505 TTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSK 564
+PYVLLSN+YA G W DVA R+ ++ KE S IEV+ +F + H +
Sbjct: 482 KRAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPR 541
Query: 565 IGEINYMLKTLS 576
IGEI+ L+ L+
Sbjct: 542 IGEIHAELQRLT 553
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 162/325 (49%), Gaps = 6/325 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
IS L C+ + + G S+ A+L GI+ + IV +++LY K G A VF MS
Sbjct: 79 ISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMS 138
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQ 121
R++V+WSAM++ + + G AL F QM L PN+ S + ACA + L G
Sbjct: 139 HRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGAL 198
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H G S VG +L+++Y K G A +G+ E N+V+++A+ A + N +
Sbjct: 199 MHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDR 258
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILH--CLTVKCKLESNPFVG 239
V M +GL P+ +F L+ C+ L++G +H + LES+ +V
Sbjct: 259 NRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVL 318
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ +YSK + A F I DL+ WN+ IA + EK L +F+ M + G+
Sbjct: 319 TALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLE-GL 377
Query: 300 RPDDFTFASILAACAGLASVQHGKQ 324
+P TF S+L AC+ + G++
Sbjct: 378 QPTIITFTSVLFACSHAGMLDQGRK 402
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 120/222 (54%), Gaps = 5/222 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S L C+ L+ G +H V GIQ V+V ++NLY KCG++ A + F ++
Sbjct: 179 TLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQI 238
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
E+N+V+WSA+ + + + + A+ +M L PN F S + ACA I +L +G+
Sbjct: 239 VEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGR 298
Query: 121 QIHA--YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+IH + L G S +V +L++MY K G + A ++ + +LV +N+LIA +
Sbjct: 299 RIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQ 358
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKG 220
+ Q EK E+F+ M +GL P +F L CS + L +G
Sbjct: 359 HGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQG 400
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 181/576 (31%), Positives = 310/576 (53%), Gaps = 34/576 (5%)
Query: 34 QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQ 93
+P + N +L Y K + A ++FD M ER++VSW+ M+S Q+G AL+
Sbjct: 201 EPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVD 260
Query: 94 MH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGY 150
M + + + S+++ACA + SL G+Q+HA ++ +V ++L+ +Y K G
Sbjct: 261 MQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGC 320
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
+A V+ + N V++ LIAGF+++ + E+F M + + D+F+ A +
Sbjct: 321 FKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISG 380
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
C DL G LH L +K V N+++++Y+K + + AE FR + EKD++SW
Sbjct: 381 CCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSW 440
Query: 271 NTFIAACSHCADY-------------------------------EKGLSVFKEMSNDHGV 299
+ I A S + E GL ++ M ++ V
Sbjct: 441 TSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDV 500
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
RPD T+ ++ CA L + + G QI +++ L D V NA++ MY+KCG I + K
Sbjct: 501 RPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARK 560
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F+ + +++VSWN +I ++ H +G A+++F+ + G KPD ++++ +L+ C+H+GL
Sbjct: 561 VFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGL 620
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V+EG++YF+ M++ + ISP +EHF+C++DLLGRAG L EA++ + P+ V G LL
Sbjct: 621 VQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALL 680
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
SAC++ + + E AK +F L + Y+L++ +YA G D A RK+++D G+KK
Sbjct: 681 SACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKK 740
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P YS +EV F + SH ++ I L L
Sbjct: 741 NPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDEL 776
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/495 (23%), Positives = 221/495 (44%), Gaps = 69/495 (13%)
Query: 34 QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQ 93
P+VI N +LN Y K G++ A ++F M R++ SW+ ++SG+ Q+ ++L +LE F
Sbjct: 68 HPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVS 127
Query: 94 MHL----LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
MH PN + FA A+ +C + Q+ KFG S V +L+ M+++ G
Sbjct: 128 MHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCG 187
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVE-----------NQQPEKGFEVFKLML----- 193
A ++ EP + N+++ G+V+ + PE+ + +M+
Sbjct: 188 TVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQ 247
Query: 194 ---------------RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+G+ D ++ L C+ + LR G LH ++ +P+V
Sbjct: 248 SGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYV 307
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
+ ++ LY+K EA+ F + +++ ++W IA + + + +F +M +
Sbjct: 308 ASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAEL- 366
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC------- 351
+ D F A++++ C + G+Q+H+ ++ Q V V N+L++MYAKC
Sbjct: 367 MTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAE 426
Query: 352 ------------------------GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGS 387
G I+ + + F+ M +NV++WN ++ A+ H
Sbjct: 427 SIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEED 486
Query: 388 ALKLFEQM-KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCL 446
L+++ M ++PD VT++ L C G K G+ K G+ D +
Sbjct: 487 GLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKV-GLILDTSVANAV 545
Query: 447 IDLLGRAGKLLEAEE 461
I + + G++LEA +
Sbjct: 546 ITMYSKCGRILEARK 560
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 214/450 (47%), Gaps = 51/450 (11%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ + +S L C++ +L+ G LHA V++ D V++ ++ LYAKCG A+ VF+
Sbjct: 270 STTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFN 329
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
+ +RN V+W+ +I+G Q G ++E F+QM + +++ A+ IS C L
Sbjct: 330 SLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCL 389
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMK------------------------------- 147
G+Q+H+ LK G V NSLISMY K
Sbjct: 390 GRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQ 449
Query: 148 VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLML-RQGLLPDRFSFAG 206
VG + A + N++++NA++ ++++ E G ++ +ML + + PD ++
Sbjct: 450 VGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVT 509
Query: 207 GLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKD 266
+ C+ + G + TVK L + V N ++ +YSK I EA K F + KD
Sbjct: 510 LFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKD 569
Query: 267 LISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
++SWN I S ++ + +F ++ G +PD ++ ++L+ C+ VQ GK
Sbjct: 570 IVSWNAMITGYSQHGMGKQAIEIFDDILK-RGAKPDYISYVAVLSGCSHSGLVQEGK--- 625
Query: 327 AHLIRMRLNQDVGVG----NALVNMYAKCGLISCSYKLFNEMLHRNVVS-WNTIIAA--- 378
++ M+ ++ G + +V++ + G ++ + L +EM + W +++A
Sbjct: 626 SYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKI 685
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFI 408
H N+ L A K ++ + PDS +++
Sbjct: 686 HGNNELAELAAKHVFELDS----PDSGSYM 711
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 164/376 (43%), Gaps = 65/376 (17%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEA 161
FA A+ +C +L + +H + G AS F+ N+L+ Y+ G DA L+ +
Sbjct: 7 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDI 66
Query: 162 FEPNLVS-------------------------------FNALIAGFVENQQPEKGFEVFK 190
PN+++ +N L++G+ ++QQ E F
Sbjct: 67 AHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFV 126
Query: 191 LMLRQG-LLPDRFSFAGGLEICSV---------------------SNDLRKG---MILHC 225
M R G P+ F+FA ++ C +D+ M + C
Sbjct: 127 SMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRC 186
Query: 226 LTVKCK-------LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
TV E F N+++ Y K + A + F + E+D++SWN ++A S
Sbjct: 187 GTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALS 246
Query: 279 HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
+ L + +M + GVR D T+ S L ACA L+S++ GKQ+HA +IR D
Sbjct: 247 QSGRVREALDMVVDMQS-KGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDP 305
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
V +ALV +YAKCG + +FN + RN V+W +IA H +++LF QM+A
Sbjct: 306 YVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAE 365
Query: 399 GIKPDSVTFIGLLTAC 414
+ D L++ C
Sbjct: 366 LMTLDQFALATLISGC 381
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 194/582 (33%), Positives = 320/582 (54%), Gaps = 18/582 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L + A+ G +HA +K G + V V N ++N+Y+KCG + A+ VF +M
Sbjct: 203 TFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQM 262
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFF----SQMHLLPNEYIFASAISACAGIQSLVKG 119
R++VSW+ +++G L AL+ F + M L ++ +++ I CA ++ L
Sbjct: 263 ETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKL-SQSTYSTVIKLCANLKQLALA 321
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDA----LLVYGEAFEPNLVSFNALIAG 175
+Q+H+ LK G+ S V +++ Y K G DA LL+ G N+VS+ A+I G
Sbjct: 322 RQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQ---NVVSWTAMIGG 378
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
++N +F M + P+ F+++ L S+ L + +H +K +
Sbjct: 379 CIQNADIPLAAALFSRMREDNVKPNEFTYSTVL-TASIPILLPQ---IHAQIIKTNYQHA 434
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
P VG ++A YSK EA F++I+ KD+++W+ ++ S D + +VF +MS
Sbjct: 435 PSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSM 494
Query: 296 DHGVRPDDFTFASILAACAG-LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
G++P++FT +S + ACA A + G+Q HA I+ R + VG+ALV MYA+ G I
Sbjct: 495 -QGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSI 553
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ +F R++VSWN++I+ +A H AL F QM+ GI+ D TF+ ++ C
Sbjct: 554 DSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGC 613
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
HAGLVKEG+ YF+SM + ISP +EH++C++DL RAGKL E + P +V
Sbjct: 614 THAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMV 673
Query: 475 LGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKD 534
TLL ACR+ ++V +G+ A++L L+P ++ YVLLSN+YA+ G W + RK++
Sbjct: 674 WRTLLGACRVHKNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDS 733
Query: 535 SGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
+KKE S I+++ F + SH +I LK ++
Sbjct: 734 KKVKKEAGCSWIQIKNKVHSFIACDKSHPLSEQIYAKLKAMT 775
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 226/462 (48%), Gaps = 10/462 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGI-QPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++S +L C G LH +K G + +V V ++++Y KCG + R VF+
Sbjct: 101 AVSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEG 160
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
M +RN+V+W+++++G+ Q + F +M + PN + F S +SA A ++ G
Sbjct: 161 MPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLG 220
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+++HA S+KFG S FV NSLI+MY K G +A V+ + ++VS+N L+AG + N
Sbjct: 221 RRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLN 280
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ + ++F + +++ +++C+ L LH +K S+ V
Sbjct: 281 EHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVM 340
Query: 240 NTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
IM YSK + +A F L+ ++++SW I C AD ++F M D+
Sbjct: 341 TAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDN- 399
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
V+P++FT++++L A + QIHA +I+ VG AL+ Y+K G +
Sbjct: 400 VKPNEFTYSTVLTASIPILL----PQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEAL 455
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+F + H++VV+W+ +++ ++ A +F +M G+KP+ T + AC
Sbjct: 456 SIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPT 515
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
+ F+++ Y I + L+ + R G + A
Sbjct: 516 AGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSAR 557
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 182/369 (49%), Gaps = 14/369 (3%)
Query: 56 ARKVFDEMSERNLVSWS-----AMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAIS-- 108
AR+ D M R+ + S A++ + AL+ F +H + +A+S
Sbjct: 48 ARQALDGMPSRDAAAGSSSNPVAIVDYGRRGKGRGEALDHFVDVHRCGR--VQGAAVSRV 105
Query: 109 --ACAGIQSLVKGQQIHAYSLKFGYASISF-VGNSLISMYMKVGYSSDALLVYGEAFEPN 165
C I V G+Q+H +K G+ VG +L+ MYMK G D +V+ + N
Sbjct: 106 LKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRN 165
Query: 166 LVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHC 225
+V++ +L+ G+V+ + +F M +G+ P+ F+F L + + G +H
Sbjct: 166 VVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHA 225
Query: 226 LTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEK 285
+VK S FV N+++ +YSK L+ EA+ FR +E +D++SWNT +A +
Sbjct: 226 QSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLE 285
Query: 286 GLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALV 345
L +F + S + T+++++ CA L + +Q+H+ +++ + D V A++
Sbjct: 286 ALQLFHD-SRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIM 344
Query: 346 NMYAKCGLISCSYKLFNEML-HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDS 404
+ Y+KCG + ++ +F M +NVVSW +I + A LF +M+ +KP+
Sbjct: 345 DAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNE 404
Query: 405 VTFIGLLTA 413
T+ +LTA
Sbjct: 405 FTYSTVLTA 413
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 144/295 (48%), Gaps = 9/295 (3%)
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPF-VGNTIMALYSKFNLIGEAEKAFRLIEEKD 266
L++C + D G LHCL VKC + VG ++ +Y K + + F + +++
Sbjct: 106 LKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRN 165
Query: 267 LISWNTFIAACSH---CADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGK 323
+++W + + C+D +++F M + GV P+ FTF S+L+A A +V G+
Sbjct: 166 VVTWTSLLTGYVQGRACSDV---MALFFRMRAE-GVWPNPFTFTSVLSAVASQGAVDLGR 221
Query: 324 QIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR 383
++HA ++ V V N+L+NMY+KCGL+ + +F +M R++VSWNT++A +
Sbjct: 222 RVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNE 281
Query: 384 LGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF 443
AL+LF +A+ K T+ ++ C + + + + K +G D
Sbjct: 282 HQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLK-HGFHSDGNVM 340
Query: 444 TCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQL 498
T ++D + G+L +A P Q+ + ++ C D+ + L ++
Sbjct: 341 TAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRM 395
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 190/584 (32%), Positives = 321/584 (54%), Gaps = 17/584 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +++L + ++ G+ +HA ++K G + V N ++ +Y K + A VFD M
Sbjct: 207 TFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSM 266
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQ 120
R+ V+W+ MI G+ G +L + F +M L + +F +A+ C+ + L +
Sbjct: 267 VVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTK 326
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEP-NLVSFNALIAGFVEN 179
Q+H +K GY + +L+ Y K +A ++ A N+V++ A+I GFV+N
Sbjct: 327 QLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQN 386
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+K ++F M R+G+ P+ F+++ L S+ L + LH +K E P V
Sbjct: 387 NNNKKAVDLFCQMSREGVRPNHFTYSTVLA-GKPSSLLSQ---LHAQIIKAYYEKVPSVA 442
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ Y K + E+ + F I KD+++W+ + + D EK + VF ++ + GV
Sbjct: 443 TALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKE-GV 501
Query: 300 RPDDFTFASILAACAG-LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+P+++TF+S++ AC+ A+V+HGKQIHA ++ + + V +AL+ MY+K G I +
Sbjct: 502 KPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAE 561
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
K+F R++VSWN++I + H AL++F+ M+ G+ D VTFIG+LTAC HAG
Sbjct: 562 KVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAG 621
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV+EGE YFN M K Y I EH++C++DL RAG +A + P P + TL
Sbjct: 622 LVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTL 681
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L+ACR+ R++ +G+ A++L LQP YVLLSN++A G W + A RK++ + +K
Sbjct: 682 LAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVK 741
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSH-------SKIGEINYMLKTL 575
KE S IE++ F + SH +K+ E++ LK +
Sbjct: 742 KEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDM 785
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 148/544 (27%), Positives = 257/544 (47%), Gaps = 49/544 (9%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G +H LK G DV V ++++Y K R +FDEM +N+VSW++++SG+ +
Sbjct: 123 GRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYAR 182
Query: 81 AGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
G + + +QM + PN + FA+ + A A + G Q+HA +K G+ +FV
Sbjct: 183 NGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFV 242
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
N+LI MY+K DA V+ + V++N +I G+ +GF++F M G+
Sbjct: 243 CNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGV 302
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
R F L++CS +L LHC VK E + +M YSK + + EA K
Sbjct: 303 KLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFK 362
Query: 258 AFRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA-CAG 315
F + + ++++W I + +K + +F +MS + GVRP+ FT++++LA +
Sbjct: 363 LFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSRE-GVRPNHFTYSTVLAGKPSS 421
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
L S Q+HA +I+ + V AL++ Y K G + S ++F + +++V+W+ +
Sbjct: 422 LLS-----QLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAM 476
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN------------HAGLVKEG 423
+ A R A+++F Q+ G+KP+ TF ++ AC+ HA VK G
Sbjct: 477 LTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSG 536
Query: 424 EA-----------------YFNSMEKTYGISP--DIEHFTCLIDLLGRAG---KLLEAEE 461
++ S EK + DI + +I G+ G K LE +
Sbjct: 537 KSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQ 596
Query: 462 YTKKFPLGQDPIVLGTLLSACRLRRDVVIGER---LAKQLFHLQPTTTSPYVLLSNLYAS 518
+ L D + +L+AC V GE+ + + +H+ Y + +LY+
Sbjct: 597 IMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEH-YSCMVDLYSR 655
Query: 519 DGMW 522
GM+
Sbjct: 656 AGMF 659
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 204/444 (45%), Gaps = 27/444 (6%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAG 112
A ++FDE +++ ++ ++ + AL F +H L + + A+ C
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
+ V G+Q+H SLK G+ VG SL+ MYMK D ++ E N+VS+ +L
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176
Query: 173 IAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
++G+ N ++ + M +G+ P+ F+FA L + + + G+ +H + VK
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
E FV N ++ +Y K ++G+AE F + +D ++WN I + Y +G +F
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
M GV+ F + L C+ + KQ+H +++ + AL+ Y+KC
Sbjct: 297 MRLA-GVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCS 355
Query: 353 LISCSYKLFN--EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGL 410
+ ++KLF+ + H NVV+W +I + A+ LF QM G++P+ T+ +
Sbjct: 356 SVDEAFKLFSMADAAH-NVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTV 414
Query: 411 LTACN-------HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYT 463
L HA ++K AY+ EK ++ T L+D + G ++E+
Sbjct: 415 LAGKPSSLLSQLHAQIIK---AYY---EKVPSVA------TALLDAYVKTGNVVESARVF 462
Query: 464 KKFPLGQDPIVLGTLLSACRLRRD 487
P +D + +L+ RD
Sbjct: 463 YSIP-AKDIVAWSAMLTGLAQTRD 485
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 187/549 (34%), Positives = 291/549 (53%), Gaps = 37/549 (6%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAG 112
A VF + E N + W+ M+ G+ + + + AL+ + M LLPN Y F + +CA
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG------------- 159
++ +GQQIH + LK GY +V SLISMY + G DA V+
Sbjct: 79 SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138
Query: 160 --------------EAFE----PNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDR 201
E F+ ++VS+NA+I+G+ E ++ E+FK M++ + PD
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198
Query: 202 FSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRL 261
+ L C+ S + G +H SN + N ++ LYSK + A F
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG 258
Query: 262 IEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQH 321
+ KD++SWNT I +H Y++ L +F+EM G P+D T SIL ACA L ++
Sbjct: 259 LSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRS-GESPNDVTIVSILPACAHLGAIDI 317
Query: 322 GKQIHAHLIRM--RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
G+ IH ++ + + + +L++MYAKCG I ++++FN MLH+++ SWN +I
Sbjct: 318 GRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGF 377
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
A H + LF +M+ GI+PD +TF+GLL+AC+H+G + G F SM + Y I+P
Sbjct: 378 AMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPK 437
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLF 499
+EH+ C+IDLLG +G EA+E K P+ D ++ +LL ACR ++ + E A+ L
Sbjct: 438 LEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLM 497
Query: 500 HLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAE 559
++P YVLLSN+YA+ G W +VA R +L G+KK P S IE+ +F V +
Sbjct: 498 KVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVGD 557
Query: 560 FSHSKIGEI 568
H + EI
Sbjct: 558 KLHPRNREI 566
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 218/487 (44%), Gaps = 72/487 (14%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C+K+KA ++G +H VLK+G +PD+ V ++++YA+ G++ A KVFD S R+
Sbjct: 72 LLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRD 131
Query: 68 LVS-------------------------------WSAMISGHHQAGEHLLALEFFSQM-- 94
+VS W+AMISG+ + G + ALE F +M
Sbjct: 132 VVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMK 191
Query: 95 -HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSD 153
++ P+E + +SACA +S+ G+Q+H++ G+ S + N+LI +Y K G
Sbjct: 192 TNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVET 251
Query: 154 ALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSV 213
A ++ ++VS+N LI G+ ++ +F+ MLR G P+ + L C+
Sbjct: 252 ACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAH 311
Query: 214 SNDLRKGMILHC-LTVKCKLESN-PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
+ G +H + K K +N P + +++ +Y+K I A + F + K L SWN
Sbjct: 312 LGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWN 371
Query: 272 TFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
I + G +F M + G+ PDD TF +L+AC+ + G+ I
Sbjct: 372 AMIFGFAMHGRANAGFDLFSRMRKN-GIEPDDITFVGLLSACSHSGKLDLGRHIFK---- 426
Query: 332 MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
+ QD + L + L+ S LF E
Sbjct: 427 -SMTQDYDITPKLEHYGCMIDLLGHS-GLFKEAK-------------------------- 458
Query: 392 FEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLG 451
E +K ++PD V + LL AC G ++ E++ ++ K +P + L ++
Sbjct: 459 -EMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPG--SYVLLSNIYA 515
Query: 452 RAGKLLE 458
AG+ E
Sbjct: 516 TAGEWDE 522
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 152/319 (47%), Gaps = 7/319 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L C+++++++ G +H+ + G ++ + N +++LY+KCG++ A +F+ +
Sbjct: 200 TMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGL 259
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
S +++VSW+ +I G+ + AL F +M PN+ S + ACA + ++ G+
Sbjct: 260 SCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGR 319
Query: 121 QIHAYSLK--FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
IH Y K + + SLI MY K G A V+ +L S+NA+I GF
Sbjct: 320 WIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAM 379
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPF 237
+ + GF++F M + G+ PD +F G L CS S L G I +T +
Sbjct: 380 HGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLE 439
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
++ L L EA++ + + E D + W + + AC + E S + +
Sbjct: 440 HYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKV 499
Query: 297 HGVRPDDFTFASILAACAG 315
P + S + A AG
Sbjct: 500 EPENPGSYVLLSNIYATAG 518
>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 750
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 186/574 (32%), Positives = 315/574 (54%), Gaps = 5/574 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQ-PDVIVSNHVLNLYAKCGKMILARKVFDE 62
S L C + ++L G LH ++MGI+ P V++ N VL +Y +CG + A K+FDE
Sbjct: 83 SYQCLFEACRELRSLSHGRLLHNR-MRMGIENPSVLLQNCVLQMYCECGSLEDADKLFDE 141
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
MS+ N VS + MIS + + G A+ FS+M P ++ + + + ++L G
Sbjct: 142 MSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIG 201
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+QIHA+ ++ G S + + +++MY+K G+ A V+ + V++ L+ G+ +
Sbjct: 202 RQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQA 261
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ ++F ++ +G+ D F F+ L+ C+ +LR G +H K LE VG
Sbjct: 262 GRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVG 321
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ Y K + A +AF+ I E + +SW+ I+ + +E+ + FK + + + V
Sbjct: 322 TPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAV 381
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+ FT+ SI AC+ LA G Q+HA I+ L +AL+ MY+KCG + +++
Sbjct: 382 VLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHE 441
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F M + ++V+W I+ HA + AL+LFE+M + G+KP+SVTFI +LTAC+HAGL
Sbjct: 442 VFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGL 501
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V++G+ Y ++M + Y ++P I+H+ C+ID+ R+G L EA + K P D + L
Sbjct: 502 VEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFL 561
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
S C +++ +G+ ++L L P T+ YVL NLY G W + A K++ + LKK
Sbjct: 562 SGCWTHKNLELGKIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEVMKLMNERMLKK 621
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLK 573
E S S I+ +G +F V + H + EI LK
Sbjct: 622 ELSCSWIQEKGKIHRFIVGDKHHPQSQEIYEKLK 655
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 117/233 (50%), Gaps = 5/233 (2%)
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV--GNT 241
+ FE F+ M + G+ +S+ E C L G +LH ++ +E NP V N
Sbjct: 64 EAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLH-NRMRMGIE-NPSVLLQNC 121
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y + + +A+K F + + + +S T I+A + +K + +F M + G +P
Sbjct: 122 VLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRML-ESGDKP 180
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
+ ++L + ++ G+QIHAH+IR L + + +VNMY KCG + + ++F
Sbjct: 181 PSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVF 240
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
++M + V+W ++ + ALKLF + G++ DS F +L AC
Sbjct: 241 DQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKAC 293
>gi|116312013|emb|CAJ86370.1| OSIGBa0117N13.14 [Oryza sativa Indica Group]
gi|116312056|emb|CAJ86420.1| H0303G06.9 [Oryza sativa Indica Group]
Length = 559
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 189/546 (34%), Positives = 308/546 (56%), Gaps = 6/546 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQP-DVIVSNHVLNLYAKCGKMILARKVFDEMS 64
SSLL C + A +QG S+H V P D+ +S ++ YA+ G + ARK+FD M
Sbjct: 15 SSLLQCCISSCAFRQGKSVHGRVAAASASPPDLHLSTKLIIFYARFGDVAAARKMFDGMP 74
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQ 121
R++VSW+AM+SG+ + G ALE F+ M PN++ + SA SACAG G+Q
Sbjct: 75 HRSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGAGCARSGEQ 134
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+HA + K +A FV ++L+ M+++ G DA ++ E + ++VS+NALI GFVE
Sbjct: 135 VHACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMGKKDVVSWNALIRGFVERGH 194
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+F ML++ ++PD ++ L+ C + ++H +K V +
Sbjct: 195 DGDALGLFSSMLKEAMIPDHYTLGSALKACGIVGVAVNVELIHSCIIKLGYWDEKVVIGS 254
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY-EKGLSVFKEMSNDHGVR 300
++ Y+K + A + I E DL+S I+ + +Y E + +F ++ + G+
Sbjct: 255 LINSYAKCRSMSSARVIYDSISEPDLVSSTALISGYTMDRNYSEDAMELFCKI-HRKGLW 313
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D +S+L CA +AS + G QIHA++ + + D+ + NALV+MYAK G S + +
Sbjct: 314 IDGVLLSSVLCLCASVASARFGTQIHAYMCKKQSMGDIALDNALVDMYAKAGEFSDAKRA 373
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+EM +RNV+SW ++I A + G A+ LF +M G++P+ VTF+ LL+AC H GL
Sbjct: 374 FDEMPYRNVISWTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLLSACGHCGLT 433
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+G YF SM YGI P EH++ IDLL R G+L +A + +K L + +LG +L
Sbjct: 434 NKGMEYFTSMMSRYGIDPRAEHYSSAIDLLARGGQLEDAWKLVQKTNLKPNSSMLGAMLG 493
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC+L ++++GE AK LF + P ++ Y +L+N+YA +W D R+++ ++ KE
Sbjct: 494 ACKLHGNMLLGETAAKNLFSIDPGSSVNYAVLANMYAECSLWEDAQRTREVIDETTDGKE 553
Query: 541 PSYSMI 546
+S+I
Sbjct: 554 VGFSVI 559
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 88/174 (50%), Gaps = 5/174 (2%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+SS+L C+ + + G +HA + K D+ + N ++++YAK G+ A++ FDEM
Sbjct: 319 LSSVLCLCASVASARFGTQIHAYMCKKQSMGDIALDNALVDMYAKAGEFSDAKRAFDEMP 378
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
RN++SW+++I+ + G A+ F++M + PN+ F S +SAC KG +
Sbjct: 379 YRNVISWTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLLSACGHCGLTNKGME 438
Query: 122 IHAYSL-KFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALI 173
+ ++G + +S I + + G DA LV +PN A++
Sbjct: 439 YFTSMMSRYGIDPRAEHYSSAIDLLARGGQLEDAWKLVQKTNLKPNSSMLGAML 492
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 85/165 (51%), Gaps = 2/165 (1%)
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN-QDVGVGNALVNMYAKCGLISC 356
G +P ++S+L C + + GK +H + + D+ + L+ YA+ G ++
Sbjct: 6 GAKPTAPFYSSLLQCCISSCAFRQGKSVHGRVAAASASPPDLHLSTKLIIFYARFGDVAA 65
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ K+F+ M HR+VVSW +++ +A + AL+LF M+A+G +P+ T+ +AC
Sbjct: 66 ARKMFDGMPHRSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAG 125
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
AG + GE K + D+ + L+D+ R G + +A +
Sbjct: 126 AGCARSGEQVHACAAKGR-FAGDMFVQSALMDMHLRCGSVEDARQ 169
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 191/568 (33%), Positives = 321/568 (56%), Gaps = 4/568 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + +L C+ G +H V+ G + D V+N ++ +Y+KCG + ARK+F+ M
Sbjct: 248 TYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTM 307
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ + V+W+ +I+G+ Q G A F+ M + P+ FAS + + SL +
Sbjct: 308 PQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCK 367
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H+Y ++ ++ ++LI +Y K G A ++ + ++ A+I+G+V +
Sbjct: 368 EVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHG 427
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
F+ ++++G++P+ + A L C+ L+ G LHC +K +LE+ VG+
Sbjct: 428 LNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVGS 487
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
I +Y+K + A + FR + E D I WN+ I++ S E + +F++M G +
Sbjct: 488 AITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMS-GAK 546
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D + +S L++ A L ++ +GK++H ++IR + D V +AL++MY+KCG ++ + +
Sbjct: 547 FDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALARCV 606
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN M +N VSWN+IIAA+ NH L LF +M G+ PD VTF+ +++AC HAGLV
Sbjct: 607 FNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHAGLV 666
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG YF+ M + YGI +EH+ C++DL GRAG+L EA + K P D V GTLL
Sbjct: 667 GEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLG 726
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACRL +V + + ++ L L P + YVLLSN++A G WG V R+++K+ G++K
Sbjct: 727 ACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWGSVLKVRRLMKEKGVQKI 786
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
P YS I+V G F+ AE +H + EI
Sbjct: 787 PGYSWIDVNGGTHMFSAAEGNHPESVEI 814
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 237/485 (48%), Gaps = 8/485 (1%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
+ + SL CS +QQ +H ++ G+ +S+ VL LY CG++ +F
Sbjct: 43 LTTQLESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLF 102
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLV 117
+ N + W+ MI G + G AL F+ +M ++ P++Y F I AC G+ ++
Sbjct: 103 FGLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVP 162
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+H + G+ FVG++LI +Y GY DA V+ E + + + +N ++ G+V
Sbjct: 163 LCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYV 222
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
++ F M + + ++ L IC+ G +H L + E +P
Sbjct: 223 KSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQ 282
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V NT++A+YSK + +A K F + + D ++WN IA ++ +F M +
Sbjct: 283 VANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISA- 341
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
GV+PD TFAS L + S++H K++H++++R R+ DV + +AL+++Y K G + +
Sbjct: 342 GVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMA 401
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
K+F + +V +I+ + H L A+ F + G+ P+S+T +L AC
Sbjct: 402 RKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAAL 461
Query: 418 GLVKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
+K G E + + ++K + + + + D+ + G+L A E+ ++ D I
Sbjct: 462 AALKLGKELHCDILKKQ--LENIVNVGSAITDMYAKCGRLDLAYEFFRRMS-ETDSICWN 518
Query: 477 TLLSA 481
+++S+
Sbjct: 519 SMISS 523
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 195/581 (33%), Positives = 311/581 (53%), Gaps = 50/581 (8%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMI-----LARK 58
S S L C K L+Q +HA+++K PD ++ L A C + + A
Sbjct: 39 SFLSTLQTCKSIKGLKQ---IHASIIKTMPSPDAQLTIST-RLSALCAQSLPIDPRYALS 94
Query: 59 VFDEMSERNLVSWSAMISGHHQAG-EHLLALEFFSQM---HLLPNEYIFASAISACAGIQ 114
+ ++ NL ++A+I G + + + L + QM ++P+ Y + ACA +
Sbjct: 95 LLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESR 154
Query: 115 SLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIA 174
++ +G+++H ++K G AS +V N+L+ MY A V+ + + +LVS+ +I
Sbjct: 155 AVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQ 214
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
G+V+ GF R+G+ GL I SN +
Sbjct: 215 GYVK-----MGFA------REGV---------GLYIIRNSN----------------VNL 238
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
+ FVGN ++ +Y K A K F+ + K+++SWN+ I+ + +++ L +F++M
Sbjct: 239 DVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQ 298
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
GV+PDD T ++L +CA L ++ GK +HA+L R ++ D +GNALV+MYAKCG I
Sbjct: 299 R-LGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSI 357
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ +F M ++V S+ +I A H GG AL LF +M GI+PD VTF+G+LTAC
Sbjct: 358 DQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTAC 417
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
+H GLV+EG YF M Y + P +EH+ C++DLLGRAG + EAEE+ + P+ D V
Sbjct: 418 SHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFV 477
Query: 475 LGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKD 534
LG LL AC++ V +GE + K++ ++P YVL+SN+Y+S W D RK +K+
Sbjct: 478 LGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKE 537
Query: 535 SGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
L+K P S IE+ G +F + SH KI EI +L +
Sbjct: 538 RNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEI 578
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 177/536 (33%), Positives = 296/536 (55%), Gaps = 6/536 (1%)
Query: 19 QQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGH 78
+ G +HA + G D V N ++ +Y CG+M +AR+VFD M ER LVSW+ MI+G+
Sbjct: 140 EMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGY 199
Query: 79 HQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS 135
+ G E L+ ++ + P+ S + C+ ++ L G+++HA
Sbjct: 200 FKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDI 259
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
V NSL+ MY K G +A +++ E + ++VS+ ++ G++ N + ++M +
Sbjct: 260 SVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFE 319
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
+ P+ + A L C+ L+ G LH ++ KLES V ++ +Y+K N + +
Sbjct: 320 SVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLS 379
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
+ F ++ WN I+ C H K + +FK+M + V P+D T S+L A A
Sbjct: 380 FRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLME-AVDPNDATLNSLLPAYAF 438
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML--HRNVVSWN 373
L +Q + +H +LIR + V L+++Y+KCG + ++ +FN + +++++W+
Sbjct: 439 LTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWS 498
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT 433
IIA + H G +A+ LF+QM +G+KP+ +TF +L AC+HAGLV EG F M +
Sbjct: 499 AIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLED 558
Query: 434 YGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGER 493
+S +H+TC+IDLLGRAG+L EA E + + V G LL +C + +V +GE
Sbjct: 559 NQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEV 618
Query: 494 LAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQ 549
AK LF L+P T YVLL+N+Y++ G W D R M+ + GL+K P++S+IEV+
Sbjct: 619 AAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEVR 674
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 145/476 (30%), Positives = 237/476 (49%), Gaps = 11/476 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLN----LYAKCGKMILARKVFDE 62
SLL C+ K++ +HA + +G+ S+H+L+ YA G ARK+FDE
Sbjct: 23 SLLQRCTSRKSIPNTKQIHAHTITLGLLSSP-YSHHLLSSLAAAYAMFGCAPHARKLFDE 81
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVK 118
+ +L SW+AMI + +G AL F QM P+ Y + I AC
Sbjct: 82 LRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEM 141
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G IHA ++ G+ S +FV NSL++MYM G A V+ E LVS+N +I G+ +
Sbjct: 142 GALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFK 201
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N ++ VF M+ +G+ PD + L +CS +L G +H L L + V
Sbjct: 202 NGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISV 261
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N+++ +Y+K + EA+ F ++++D++SW T + D L + +M
Sbjct: 262 WNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSAL-LLCQMMQFES 320
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
V+P+ T AS+L+ACA L S++HG+ +H IR +L +V V AL++MYAKC ++ S+
Sbjct: 321 VKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSF 380
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
++F++ + WN II+ ++ L A++LF+QM + P+ T LL A
Sbjct: 381 RVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLT 440
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
+++ + ++ G IE T LID+ + G L A P I+
Sbjct: 441 DLQQARNMHGYLIRS-GFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDII 495
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 200/403 (49%), Gaps = 16/403 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+L CS K L+ G +HA V + D+ V N +L++YAKCG M A+ +F EM
Sbjct: 226 TVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEM 285
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+R++VSW+ M++G+ G+ AL M + PN AS +SACA + SL G+
Sbjct: 286 DKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGR 345
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H ++++ S V +LI MY K + + V+ + + +NA+I+G + N
Sbjct: 346 CLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNG 405
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
K E+FK ML + + P+ + L + DL++ +H ++ S V
Sbjct: 406 LSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVAT 465
Query: 241 TIMALYSKFNLIGEAEKAFRLI--EEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++ +YSK + A F I ++KD+I+W+ IA E +S+F +M G
Sbjct: 466 ILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQS-G 524
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLI---RMRLNQDVGVGNALVNMYAKCGLIS 355
V+P++ TF SIL AC+ V G + ++ +M L D ++++ + G +
Sbjct: 525 VKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYT--CVIDLLGRAGRLE 582
Query: 356 CSYKLFNEMLHR-NVVSWNTIIAA---HANHRLGGSALK-LFE 393
+Y+L M R N W ++ + H N LG A K LFE
Sbjct: 583 EAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFE 625
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 170/334 (50%), Gaps = 5/334 (1%)
Query: 95 HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF---VGNSLISMYMKVGYS 151
HLL + S + C +S+ +QIHA+++ G S + + +SL + Y G +
Sbjct: 13 HLLTATARYQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCA 72
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG-LLPDRFSFAGGLEI 210
A ++ E P+L S+NA+I + + +F ML G PD +++ ++
Sbjct: 73 PHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKA 132
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
C G ++H TV +S+ FV N++MA+Y + A + F L+ E+ L+SW
Sbjct: 133 CGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSW 192
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
NT I ++ L VF M G+ PD T S+L C+ L ++ G+++HA +
Sbjct: 193 NTMINGYFKNGCVKEALMVFDWMIGK-GIEPDCATVVSVLPVCSYLKELEVGRRVHALVE 251
Query: 331 RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALK 390
L +D+ V N+L++MYAKCG + + +F EM R+VVSW T++ + + SAL
Sbjct: 252 VKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALL 311
Query: 391 LFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
L + M+ +KP+ VT +L+AC +K G
Sbjct: 312 LCQMMQFESVKPNFVTLASVLSACASLYSLKHGR 345
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 195/556 (35%), Positives = 299/556 (53%), Gaps = 51/556 (9%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAG 112
A VF+ + E NL+ W+ M GH + + + AL + M LLPN Y F + +CA
Sbjct: 41 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 100
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA----------- 161
++ +GQQIH + LK GY +V SLISMY++ G DA V+ ++
Sbjct: 101 SKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTAL 160
Query: 162 ----------------FE----PNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDR 201
F+ ++VS+NA+I+G+ E ++ E+FK M++ + PD
Sbjct: 161 ITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDE 220
Query: 202 FSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRL 261
+ + C+ S + G +H SN + N ++ LY K GE E A L
Sbjct: 221 STMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIK---CGEVETACGL 277
Query: 262 IE---EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
E KD+ISWNT I +H Y++ L +F+EM G P+D T SIL ACA L +
Sbjct: 278 FEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS-GESPNDVTMLSILPACAHLGA 336
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNA------LVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
++ G+ IH + I RL GV NA L++MYAKCG I + ++F+ +L+R++ SW
Sbjct: 337 IEIGRWIHVY-INKRLK---GVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSW 392
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
N +I A H +A +F +M+ I+PD +TF+GLL+AC+H+G++ G F SM++
Sbjct: 393 NAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKE 452
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGE 492
Y I+P +EH+ C+IDLLG +G EAEE + D ++ +LL AC++ +V +GE
Sbjct: 453 DYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGE 512
Query: 493 RLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTF 552
A+ L ++P YVLLSN+YA+ G W +VA R +L D G+KK P S IE+
Sbjct: 513 SYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVV 572
Query: 553 EKFTVAEFSHSKIGEI 568
+F + + H + EI
Sbjct: 573 HEFIIGDKFHPRNREI 588
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 190/379 (50%), Gaps = 40/379 (10%)
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSD---ALLVYGEAFEPNLVSFNALIAGF 176
+ IHA +K G + ++ + LI + + A+ V+ EPNL+ +N + G
Sbjct: 4 RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 63
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
+ P ++ M+ GLLP+ ++F L+ C+ S R+G +H +K + +
Sbjct: 64 ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDL 123
Query: 237 FVGNTIMALYSK----------FN---------------------LIGEAEKAFRLIEEK 265
+V +++++Y + F+ I A+K F I K
Sbjct: 124 YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIK 183
Query: 266 DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
D++SWN I+ + + ++ L +FKEM + VRPD+ T S+++ACA AS++ G+Q+
Sbjct: 184 DVVSWNAMISGYAETGNNKEALELFKEMMKTN-VRPDESTMVSVVSACAQSASIELGRQV 242
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
H+ + ++ + NAL+++Y KCG + + LF + +++V+SWNT+I + + L
Sbjct: 243 HSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLY 302
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE---AYFNSMEKTYGISPDIEH 442
AL LF++M +G P+ VT + +L AC H G ++ G Y N K G++ H
Sbjct: 303 KEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLK--GVANASSH 360
Query: 443 FTCLIDLLGRAGKLLEAEE 461
T LID+ + G + A++
Sbjct: 361 RTSLIDMYAKCGDIEAAQQ 379
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 126/487 (25%), Positives = 221/487 (45%), Gaps = 72/487 (14%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C+K+KA ++G +H VLK+G D+ V ++++Y + G++ ARKVFD+ S R+
Sbjct: 94 LLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRD 153
Query: 68 LVS-------------------------------WSAMISGHHQAGEHLLALEFFSQM-- 94
+VS W+AMISG+ + G + ALE F +M
Sbjct: 154 VVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMK 213
Query: 95 -HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSD 153
++ P+E S +SACA S+ G+Q+H++ G+ S + N+LI +Y+K G
Sbjct: 214 TNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVET 273
Query: 154 ALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSV 213
A ++ +++S+N LI G+ ++ +F+ MLR G P+ + L C+
Sbjct: 274 ACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAH 333
Query: 214 SNDLRKGMILHC-LTVKCKLESNPFVGNT-IMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
+ G +H + + K +N T ++ +Y+K I A++ F I + L SWN
Sbjct: 334 LGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWN 393
Query: 272 TFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
I + +F M + + PDD TF +L+AC+ + G+ H+ R
Sbjct: 394 AMIFGFAMHGRANAAFDIFSRMRKNE-IEPDDITFVGLLSACSHSGMLDLGR----HIFR 448
Query: 332 MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
+ +D YK+ ++ H + +I + L A ++
Sbjct: 449 -SMKED--------------------YKITPKLEH-----YGCMIDLLGHSGLFKEAEEM 482
Query: 392 FEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLG 451
M+ ++PD V + LL AC G V+ GE+Y ++ K +P + L ++
Sbjct: 483 INTME---MEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPG--SYVLLSNIYA 537
Query: 452 RAGKLLE 458
AG+ E
Sbjct: 538 TAGRWNE 544
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 151/319 (47%), Gaps = 7/319 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S++ C+++ +++ G +H+ + G ++ + N +++LY KCG++ A +F+ +
Sbjct: 222 TMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGL 281
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
S ++++SW+ +I G+ + AL F +M PN+ S + ACA + ++ G+
Sbjct: 282 SYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGR 341
Query: 121 QIHAYSLKF--GYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
IH Y K G A+ S SLI MY K G A V+ +L S+NA+I GF
Sbjct: 342 WIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAM 401
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPF 237
+ + F++F M + + PD +F G L CS S L G I + K+
Sbjct: 402 HGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLE 461
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
++ L L EAE+ +E E D + W + + AC + E G S + +
Sbjct: 462 HYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKI 521
Query: 297 HGVRPDDFTFASILAACAG 315
P + S + A AG
Sbjct: 522 EPKNPGSYVLLSNIYATAG 540
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 192/553 (34%), Positives = 297/553 (53%), Gaps = 45/553 (8%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAG 112
A VF+ + E N + W+ MI GH + + + +L + M LLPN Y F + +CA
Sbjct: 17 ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMK------------------------- 147
++ +GQQIH LK G+ +V SLISMY++
Sbjct: 77 SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136
Query: 148 -VGYSS-----DALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDR 201
GY+S A ++ E ++VS+NA+I+G+ E ++ E+F+ M++ + PD
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDE 196
Query: 202 FSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRL 261
++ L C+ S + G +H +SN + N ++ LYSK + A F+
Sbjct: 197 STYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQG 256
Query: 262 IEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQH 321
+ KD+ISWNT I +H Y++ L +F+EM G P+D T S+L ACA L ++
Sbjct: 257 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS-GETPNDVTMLSVLPACAHLGAIDI 315
Query: 322 GKQIHAHLIRMRLNQDVGVGNA------LVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
G+ IH + I RL GV NA L++MYAKCG I ++++FN MLH+++ SWN +
Sbjct: 316 GRWIHVY-IDKRLK---GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAM 371
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYG 435
I A H ++ LF +M+ GI+PD +TF+GLL+AC+H+G++ G F SM + Y
Sbjct: 372 IFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYK 431
Query: 436 ISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLA 495
++P +EH+ C+IDLLG +G EAEE + D ++ +LL AC++ +V + E A
Sbjct: 432 MTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFA 491
Query: 496 KQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKF 555
+ L ++P S Y+LLSN+YAS G W DVA R +L +KK P S IEV +F
Sbjct: 492 QNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEF 551
Query: 556 TVAEFSHSKIGEI 568
V + H + EI
Sbjct: 552 VVGDKFHPQNREI 564
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 217/484 (44%), Gaps = 72/484 (14%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLY-------------------- 47
LL C+K+K +G +H VLK+G D+ V ++++Y
Sbjct: 70 LLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRD 129
Query: 48 -----------AKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQ--- 93
A G + A+K+FDE+ +++VSW+AMISG+ + G + ALE F +
Sbjct: 130 VVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMK 189
Query: 94 MHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSD 153
M++ P+E + + +SACA S+ G+Q+H++ G+ S + N+LI +Y K G
Sbjct: 190 MNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVET 249
Query: 154 ALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSV 213
A ++ +++S+N LI G+ ++ +F+ MLR G P+ + L C+
Sbjct: 250 ACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAH 309
Query: 214 SNDLRKGMILHC-LTVKCKLESN-PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
+ G +H + + K +N + +++ +Y+K I A + F + K L SWN
Sbjct: 310 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWN 369
Query: 272 TFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
I + + +F M G+ PDD TF +L+AC+ + G+ H+ R
Sbjct: 370 AMIFGFAMHGRADASFDLFSRMRKI-GIEPDDITFVGLLSACSHSGMLDLGR----HIFR 424
Query: 332 MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
+ QD YK+ ++ H + +I + L A ++
Sbjct: 425 -SMTQD--------------------YKMTPKLEH-----YGCMIDLLGHSGLFKEAEEM 458
Query: 392 FEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLG 451
M+ ++PD V + LL AC G V+ E++ ++ K +P + L ++
Sbjct: 459 INTME---MEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENP--SSYILLSNIYA 513
Query: 452 RAGK 455
AG+
Sbjct: 514 SAGR 517
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 150/316 (47%), Gaps = 7/316 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
++L C+ + +++ G +H+ V G ++ + N +++LY+KCG++ A +F +S +
Sbjct: 201 TVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYK 260
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIH 123
+++SW+ +I G+ + AL F +M PN+ S + ACA + ++ G+ IH
Sbjct: 261 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIH 320
Query: 124 AYSLKF--GYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
Y K G + S + SLI MY K G A V+ +L S+NA+I GF + +
Sbjct: 321 VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGR 380
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVGN 240
+ F++F M + G+ PD +F G L CS S L G I +T K+
Sbjct: 381 ADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYG 440
Query: 241 TIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ L L EAE+ +E E D + W + + AC + E S + +
Sbjct: 441 CMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPE 500
Query: 300 RPDDFTFASILAACAG 315
P + S + A AG
Sbjct: 501 NPSSYILLSNIYASAG 516
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 119/242 (49%), Gaps = 33/242 (13%)
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
F+ + A F I+E + + WNT I + +D L+++ M + G+ P+ +TF
Sbjct: 11 FDGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVS-LGLLPNSYTFPF 69
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNM--------------------- 347
+L +CA + G+QIH ++++ + D+ V +L++M
Sbjct: 70 LLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRD 129
Query: 348 ----------YAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA 397
YA G I + KLF+E+ ++VVSWN +I+ +A AL+LFE+M
Sbjct: 130 VVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMK 189
Query: 398 TGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLL 457
++PD T++ +L+AC H+G ++ G +S +G +++ LIDL + G++
Sbjct: 190 MNVRPDESTYVTVLSACAHSGSIELGRQ-VHSWVDDHGFDSNLKIVNALIDLYSKCGEVE 248
Query: 458 EA 459
A
Sbjct: 249 TA 250
>gi|225450928|ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
[Vitis vinifera]
Length = 656
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 190/573 (33%), Positives = 309/573 (53%), Gaps = 15/573 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKM----------GIQPDVIVSNHVLNLYAKCGKM 53
IS LL C + L G SLHA+++K ++ ++V N +L++Y++CG++
Sbjct: 46 DISFLLSLCGREGYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLLSMYSRCGEL 105
Query: 54 ILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISA 109
A KVFD M ++ +SW++ ISG G+ + F Q++ ++ + ++A
Sbjct: 106 RDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTTVLTA 165
Query: 110 CAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSF 169
C + + IH+ +GY VGN+LI+ Y + G S V+ E E N+V++
Sbjct: 166 CDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTW 225
Query: 170 NALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK 229
A+I+G + Q E+ ++F M + P+ ++ L CS +R+G +H L K
Sbjct: 226 TAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWK 285
Query: 230 CKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSV 289
+ + + + +M +YSK + +A K F EE D +S + + E+ + V
Sbjct: 286 LGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEEESIQV 345
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
F +M + GV D ++IL S+ GKQIH+ +I+ + V N L+NMY+
Sbjct: 346 FVKMVKN-GVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYS 404
Query: 350 KCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
KCG + S K+F M RN VSWN++IAA A H G AL+L+E+M+ G+ P VTF+
Sbjct: 405 KCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTFLS 464
Query: 410 LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLG 469
LL AC H GLV++G + SM K YGI P +EH+ C++D++GRAG L EA+++ ++ P
Sbjct: 465 LLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEK 524
Query: 470 QDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGAR 529
+V LL AC + + +G+ A QLF P + +PY+LL+N+Y+S+G W + A
Sbjct: 525 PGILVWQALLGACSIHGNSEMGKYAANQLFLQAPESPAPYILLANIYSSEGKWKERARTI 584
Query: 530 KMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
K +KD G+ KE S IE++ F V + H
Sbjct: 585 KKMKDMGVTKETGISWIEIEKQIHSFVVEDRMH 617
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 195/620 (31%), Positives = 306/620 (49%), Gaps = 66/620 (10%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L+ + LH K D V VL++Y KCG M A+KVF +L W++MI G
Sbjct: 130 LKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYG 189
Query: 78 HHQAGEHLLALEFFSQMH----------------------------------LLPNEYIF 103
+ + G ALE F++M PN +
Sbjct: 190 YSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTY 249
Query: 104 ASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE 163
AS +SAC I L G +HA ++ + G LI MY K G A V+ E
Sbjct: 250 ASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTE 309
Query: 164 PNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMIL 223
N VS+ +LI G + E+ +F M + D+F+ A L +C D+ G L
Sbjct: 310 HNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQL 369
Query: 224 HCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD- 282
H T+ L+S+ V N ++ +Y+K + +A AF L+ +D+ISW I A S D
Sbjct: 370 HAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDV 429
Query: 283 ------------------------------YEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
+E+GL V+ +M + GV+ D TF++ ++A
Sbjct: 430 EKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLRE-GVKTDWITFSTSISA 488
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
CA LA + G QI A ++ + +V V N++V MY++CG I + K+F+ ++ +N+VSW
Sbjct: 489 CADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSW 548
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
N ++A +A + G +++FE+M G PD ++++ +L+ C+H+G V EG+ YF SM K
Sbjct: 549 NAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSMTK 608
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGE 492
+GISP EHF C++DLLGRAG+L +A+ + P + + G LL+ACR+ + + E
Sbjct: 609 DHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNTKLAE 668
Query: 493 RLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTF 552
K L L Y LL+N+Y+ G V RK+++D G++K P S IEV
Sbjct: 669 LAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVRKLMRDKGVRKNPGCSWIEVDNRV 728
Query: 553 EKFTVAEFSHSKIGEINYML 572
FTV + +H +I +++ ML
Sbjct: 729 HVFTVDDTNHPQIKDVHRML 748
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 135/535 (25%), Positives = 238/535 (44%), Gaps = 76/535 (14%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
M++ + C+ +++ LHA ++ MG++ + + NH+LN+Y+ CG + A +VF
Sbjct: 3 MSQKFYESMKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVF 62
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM--------HLLPNEYI----FASAIS 108
+ N+ SW+ MISG +G+ A + F +M + + + Y + I
Sbjct: 63 GGIMFPNVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIK 122
Query: 109 ACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVS 168
A + L Q+H ++ KF + + V S++ MY+K G A V+ P+L
Sbjct: 123 ASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFC 182
Query: 169 FNALIAGFVENQQPEKGFEVFKL-------------------------------MLRQGL 197
+N++I G+ + +K E+F M QG
Sbjct: 183 WNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGF 242
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
P+ ++A L C+ DL G LH V+ + + + G ++ +Y+K + A +
Sbjct: 243 RPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQ 302
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F + E + +SW + I + E+ L +F +M + V D FT A++L C
Sbjct: 303 VFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQM-REVPVASDQFTLATVLGVCLSQK 361
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG----------------LISCS---- 357
+ G+Q+HAH I L+ V V NALV MYAKCG +IS +
Sbjct: 362 DISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMIT 421
Query: 358 -----------YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVT 406
+ F++M RNV+SWN+++A + LK++ QM G+K D +T
Sbjct: 422 AFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWIT 481
Query: 407 FIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
F ++AC ++ G EK G S ++ ++ + R G++ EA++
Sbjct: 482 FSTSISACADLAVLILGNQILAQAEK-LGFSSNVSVANSVVTMYSRCGQIEEAQK 535
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 218/440 (49%), Gaps = 50/440 (11%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L C+ L+ G LHA +++M DV ++++YAKCG++ AR+VFD +
Sbjct: 248 TYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGL 307
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQ 120
+E N VSW+++I G QAG AL F+QM +P +++ A+ + C + + G+
Sbjct: 308 TEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGE 367
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVG-----------------YSSDALLV------ 157
Q+HA+++ G S V N+L++MY K G S A++
Sbjct: 368 QLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAG 427
Query: 158 --------YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
+ + E N++S+N+++A +++ E+G +V+ MLR+G+ D +F+ +
Sbjct: 428 DVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSIS 487
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
C+ L G + K SN V N+++ +YS+ I EA+K F I K+L+S
Sbjct: 488 ACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVS 547
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
WN +A + K + +F++M N V PD ++ S+L+ C+ V G+
Sbjct: 548 WNAMMAGYAQNGQGRKVIEIFEKMLNIGNV-PDQISYVSVLSGCSHSGFVSEGQYYF--- 603
Query: 330 IRMRLNQDVGVGN------ALVNMYAKCGLISCSYKLFNEMLHR-NVVSWNTIIAA---H 379
+ + +D G+ +V++ + G + + L N+M + N W ++AA H
Sbjct: 604 --LSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIH 661
Query: 380 ANHRLGGSALKLFEQMKATG 399
N +L A+K ++ A G
Sbjct: 662 GNTKLAELAVKNLLELDAEG 681
>gi|413932452|gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 719
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 179/556 (32%), Positives = 299/556 (53%), Gaps = 13/556 (2%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+H+ ++ G D + + ++ LY++CG + A +VF M ++V +++++S + GE
Sbjct: 158 VHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGE 217
Query: 84 HLLALEFFSQMH---LLPNEYIFASAISACA-GIQSLVKGQQIHAYSLKFGYASISFVGN 139
A++ QM L PNE+ S ++ C GI G+QIH Y LK + +
Sbjct: 218 LARAVDVLCQMTRQGLQPNEHTMTSMLAECPRGI-----GEQIHGYMLKVMGSQSVYAST 272
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
+LI Y + G A V+ N+VS+ +++ + + + + VF M+ +G+ P
Sbjct: 273 ALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQP 332
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
+ F+F+ L C + G +HC +K L ++ V N ++++Y + + E E
Sbjct: 333 NEFAFSIALSAC---GSVCLGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVL 389
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
IE DL+SW I+A EK +++ +M ++ G P+D+ F+S L++CA LA +
Sbjct: 390 GKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSE-GFTPNDYAFSSGLSSCADLALL 448
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
G+Q+H +++ + V GNAL+NMY+KCG I + F+ M +V+SWN++I
Sbjct: 449 HQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGL 508
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
A H AL+ F +M ++ +PD TF+ +L CNHAGLVKEGE +F M YG++P
Sbjct: 509 AQHGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPT 568
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLF 499
H+ C+ID+LGR G+ EA + P D ++ TLL++C+L R++ IG+ A +L
Sbjct: 569 PSHYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLASCKLHRNLDIGKLAADKLM 628
Query: 500 HLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAE 559
L ++ YVL+SNLYA W D R+ + + G+KK+ +S IEV+ F +
Sbjct: 629 ELSERDSASYVLMSNLYAMHEEWRDAERVRRRMDEIGVKKDAGWSWIEVKNEVNTFVAGD 688
Query: 560 FSHSKIGEINYMLKTL 575
SH I ML L
Sbjct: 689 MSHPDSTSIYQMLAEL 704
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 202/393 (51%), Gaps = 11/393 (2%)
Query: 35 PDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM 94
PDV++ L+ K G++ A +FD M +N+V+W+ ISG + G A F+ M
Sbjct: 68 PDVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADM 127
Query: 95 ---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
+ PN++ +A++ACA +L G+Q+H+ +++ G+A+ +++G+ LI +Y + G
Sbjct: 128 LESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSL 187
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
A V+ P++V + +L++ N + + +V M RQGL P+ + L C
Sbjct: 188 RAAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAEC 247
Query: 212 SVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
G +H +K + + ++ YS++ G A+ F +E K+++SW
Sbjct: 248 PRG----IGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWC 303
Query: 272 TFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
+ + C + L VF EM ++ GV+P++F F+ L+AC SV G+QIH I+
Sbjct: 304 SMMQLCIRDGRLDDALRVFSEMISE-GVQPNEFAFSIALSAC---GSVCLGRQIHCSAIK 359
Query: 332 MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
L D+ V NAL++MY + G +S + ++ + ++VSW I+A+ + A+ L
Sbjct: 360 RDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVAL 419
Query: 392 FEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
QM + G P+ F L++C L+ +G
Sbjct: 420 LLQMHSEGFTPNDYAFSSGLSSCADLALLHQGR 452
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 165/322 (51%), Gaps = 11/322 (3%)
Query: 146 MKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA 205
MK G DAL ++ N+V++ I+G N +PE +F ML G+ P+ F+
Sbjct: 81 MKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPNDFACN 140
Query: 206 GGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK 265
L C+ + L G +H L V+ ++ ++G+ ++ LYS+ + AE+ FR +E
Sbjct: 141 AALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAP 200
Query: 266 DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA-GLASVQHGKQ 324
D++ + + ++A + + + V +M+ G++P++ T S+LA C G+ G+Q
Sbjct: 201 DVVGYTSLVSALCRNGELARAVDVLCQMTR-QGLQPNEHTMTSMLAECPRGI-----GEQ 254
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
IH +++++ +Q V AL++ Y++ G + +F + +NVVSW +++
Sbjct: 255 IHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGR 314
Query: 385 GGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFT 444
AL++F +M + G++P+ F L+AC L + + + +++++ + DI
Sbjct: 315 LDDALRVFSEMISEGVQPNEFAFSIALSACGSVCLGR--QIHCSAIKRD--LMTDIRVSN 370
Query: 445 CLIDLLGRAGKLLEAEEYTKKF 466
L+ + GR+G + E E K
Sbjct: 371 ALLSMYGRSGFVSELEAVLGKI 392
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 5/176 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS L C+ L QG LH LK+G V N ++N+Y+KCG++ AR FD M
Sbjct: 434 AFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVM 493
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+++SW+++I G Q G+ LALE FS+M P++ F S + C + +G+
Sbjct: 494 DTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGE 553
Query: 121 Q-IHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIA 174
+ ++G +I M + G ++AL ++ FEP+++ + L+A
Sbjct: 554 TFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLA 609
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 178/578 (30%), Positives = 318/578 (55%), Gaps = 12/578 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S LL + + L +G +H+ +++ G + D +V N V+ +Y KCG + A VFD + +
Sbjct: 121 SILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQD 180
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
N+ SW+ +I+ + Q G + L S+M+ + P+ Y F + + AC + +L + + +
Sbjct: 181 PNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKIL 240
Query: 123 HAYSLK-FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
HA ++ G + VG +LI++Y K G +A V+ + ++VS++++IA F ++ Q
Sbjct: 241 HAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQ 300
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ ++ LM +G+ P+ +F LE + + G +H V+ + + +
Sbjct: 301 AKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSA 360
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y + + A F E+D++SW++ IA S + LS+F+EM D GV+P
Sbjct: 361 LVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVD-GVQP 419
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
+ TF S + ACAG+ +++ G Q+H + + L++DV V ALVN+Y KCG + + +F
Sbjct: 420 NSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVF 479
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
M +N+++W +I A+ + G +LKL M+ G+KPD + F+ +L +CN+AG +
Sbjct: 480 LGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMS 539
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY--TKKFPLGQDPIVLGTLL 479
+G Y+N M + +GI+P +EH C++D+LGRAGKL AE+ T KF + + LL
Sbjct: 540 KGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKF---ESSLAWMMLL 596
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
+AC+ D R A+++F L+P +PYVLLS+++ + G W R+ + G+++
Sbjct: 597 TACKAHNDTARAARAAEKIFQLEPKNATPYVLLSSVFCAAGSWEAAEETRRRMDGRGVQR 656
Query: 540 EPSYSMIEVQGTFEKFTVAE--FSHSKIGEINYMLKTL 575
S IE+ +F A H +GEI L+ L
Sbjct: 657 LLGRSSIEIGDRVHEFVAASDVLPHHLVGEIFAALEKL 694
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 142/465 (30%), Positives = 252/465 (54%), Gaps = 12/465 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGI----QPD-VIVSNHVLNLYAKCGKMILARKVF 60
+++L CS +AL +G +H V++ + +PD ++ N V+ +Y +CG LA VF
Sbjct: 14 AAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVF 73
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQ-SL 116
D M ++N+V+W+++IS AG A+ F +M L P+ F S + +G + +L
Sbjct: 74 DRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNL 133
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
+G+++H++ ++ GY V N ++ MY K G A V+ +PN+ S+ +IA +
Sbjct: 134 DEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAY 193
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK-LESN 235
+N + + M + G+ PD ++F L C+ L + ILH T+ L+ +
Sbjct: 194 AQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRD 253
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
VG ++ LY K + EA F I+ KD++SW++ IAA + + + + M
Sbjct: 254 AAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDL 313
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
+ GVRP++ TF ++L A L + Q+GK+IHA +++ + DV + +ALV MY G +
Sbjct: 314 E-GVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVE 372
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ +F R+VVSW+++IA ++ + AL LF +M+ G++P+SVTF+ + AC
Sbjct: 373 TARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACA 432
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
G ++ G + + G+ D+ T L++L G+ G+L EAE
Sbjct: 433 GVGALRRGTQLHERV-RCLGLDKDVPVATALVNLYGKCGRLEEAE 476
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 10/175 (5%)
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVG-----VGNALVNMYAKCGLISCSYKLF 361
A+IL AC+ L ++ GK++H ++R L QD + N ++ MY +CG + +F
Sbjct: 14 AAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVF 73
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG-LLTACNHAGLV 420
+ M +NVV+W ++I+A G A+ LF +M +G+ PD +TF LL +
Sbjct: 74 DRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNL 133
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
EG+ + + +T G D ++++ G+ G + E+ F QDP V
Sbjct: 134 DEGKRVHSHIMQT-GYEGDRMVMNLVVEMYGKCG---DVEQAGNVFDSIQDPNVF 184
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 177/536 (33%), Positives = 296/536 (55%), Gaps = 6/536 (1%)
Query: 19 QQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGH 78
+ G +HA + G D V N ++ +Y CG+M +AR+VFD M ER LVSW+ MI+G+
Sbjct: 140 EMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGY 199
Query: 79 HQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS 135
+ G E L+ ++ + P+ S + C+ ++ L G+++HA
Sbjct: 200 FKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDI 259
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
V NSL+ MY K G +A +++ E + ++VS+ ++ G++ N + ++M +
Sbjct: 260 SVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFE 319
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
+ P+ + A L C+ L+ G LH ++ KLES V ++ +Y+K N + +
Sbjct: 320 SVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLS 379
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
+ F ++ WN I+ C H K + +FK+M + V P+D T S+L A A
Sbjct: 380 FRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLME-AVDPNDATLNSLLPAYAF 438
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML--HRNVVSWN 373
L +Q + +H +LIR + V L+++Y+KCG + ++ +FN + +++++W+
Sbjct: 439 LTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWS 498
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT 433
IIA + H G +A+ LF+QM +G+KP+ +TF +L AC+HAGLV EG F M +
Sbjct: 499 AIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLED 558
Query: 434 YGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGER 493
+S +H+TC+IDLLGRAG+L EA E + + V G LL +C + +V +GE
Sbjct: 559 NQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEV 618
Query: 494 LAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQ 549
AK LF L+P T YVLL+N+Y++ G W D R M+ + GL+K P++S+IEV+
Sbjct: 619 AAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEVR 674
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 146/476 (30%), Positives = 238/476 (50%), Gaps = 11/476 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLN----LYAKCGKMILARKVFDE 62
SLL C+ K++ +HA + +G+ S+H+L+ YA CG ARK+FDE
Sbjct: 23 SLLQRCTSRKSIPNTKQIHAHTITLGLLSSP-YSHHLLSSLAAAYAMCGCAPHARKLFDE 81
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVK 118
+ +L SW+AMI + +G AL F QM P+ Y + I AC
Sbjct: 82 LRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEM 141
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G IHA ++ G+ S +FV NSL++MYM G A V+ E LVS+N +I G+ +
Sbjct: 142 GALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFK 201
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N ++ VF M+ +G+ PD + L +CS +L G +H L L + V
Sbjct: 202 NGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISV 261
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N+++ +Y+K + EA+ F ++++D++SW T + D L + +M
Sbjct: 262 WNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSAL-LLCQMMQFES 320
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
V+P+ T AS+L+ACA L S++HG+ +H IR +L +V V AL++MYAKC ++ S+
Sbjct: 321 VKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSF 380
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
++F++ + WN II+ ++ L A++LF+QM + P+ T LL A
Sbjct: 381 RVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLT 440
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
+++ + ++ G IE T LID+ + G L A P I+
Sbjct: 441 DLQQARNMHGYLIRS-GFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDII 495
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 200/403 (49%), Gaps = 16/403 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+L CS K L+ G +HA V + D+ V N +L++YAKCG M A+ +F EM
Sbjct: 226 TVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEM 285
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+R++VSW+ M++G+ G+ AL M + PN AS +SACA + SL G+
Sbjct: 286 DKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGR 345
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H ++++ S V +LI MY K + + V+ + + +NA+I+G + N
Sbjct: 346 CLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNG 405
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
K E+FK ML + + P+ + L + DL++ +H ++ S V
Sbjct: 406 LSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVAT 465
Query: 241 TIMALYSKFNLIGEAEKAFRLI--EEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++ +YSK + A F I ++KD+I+W+ IA E +S+F +M G
Sbjct: 466 ILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQS-G 524
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLI---RMRLNQDVGVGNALVNMYAKCGLIS 355
V+P++ TF SIL AC+ V G + ++ +M L D ++++ + G +
Sbjct: 525 VKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYT--CVIDLLGRAGRLE 582
Query: 356 CSYKLFNEMLHR-NVVSWNTIIAA---HANHRLGGSALK-LFE 393
+Y+L M R N W ++ + H N LG A K LFE
Sbjct: 583 EAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFE 625
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 170/334 (50%), Gaps = 5/334 (1%)
Query: 95 HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF---VGNSLISMYMKVGYS 151
HLL + S + C +S+ +QIHA+++ G S + + +SL + Y G +
Sbjct: 13 HLLTATARYQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCA 72
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG-LLPDRFSFAGGLEI 210
A ++ E P+L S+NA+I + + +F ML G PD +++ ++
Sbjct: 73 PHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKA 132
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
C G ++H TV +S+ FV N++MA+Y + A + F L+ E+ L+SW
Sbjct: 133 CGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSW 192
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
NT I ++ L VF M G+ PD T S+L C+ L ++ G+++HA +
Sbjct: 193 NTMINGYFKNGCVKEALMVFDWMIGK-GIEPDCATVVSVLPVCSYLKELEVGRRVHALVE 251
Query: 331 RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALK 390
L +D+ V N+L++MYAKCG + + +F EM R+VVSW T++ + + SAL
Sbjct: 252 VKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALL 311
Query: 391 LFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
L + M+ +KP+ VT +L+AC +K G
Sbjct: 312 LCQMMQFESVKPNFVTLASVLSACASLYSLKHGR 345
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 182/516 (35%), Positives = 285/516 (55%), Gaps = 21/516 (4%)
Query: 72 SAMISGHHQAGE------HLLALEFFSQMHLLP---------NEYIFASAISACAGIQSL 116
S+++S H+ E H + S MH+L + ++ I C ++
Sbjct: 242 SSLVSPHYVPPETESLLNHCYRRDLPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAV 301
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
+G+++H + GY +F+ N LI+MY+K +A +++ + E N+VS+ +I+ +
Sbjct: 302 REGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAY 361
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
Q ++ + M R G++P+ F+F+ L C DL++ LH +K LES+
Sbjct: 362 SNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDLKQ---LHSWIMKVGLESDV 418
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
FV + ++ +YSK + EA K FR + D + WN+ IAA + +D ++ L ++K M
Sbjct: 419 FVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRV 478
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
G D T S+L AC L+ ++ G+Q H H+ ++ +QD+ + NAL++MY KCG +
Sbjct: 479 -GFPADQSTLTSVLRACTSLSLLELGRQAHVHV--LKFDQDLILNNALLDMYCKCGSLED 535
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ +FN M ++V+SW+T+IA A + AL LFE MK G KP+ +T +G+L AC+H
Sbjct: 536 AKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSH 595
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
AGLV EG YF SM YGI P EH+ C++DLLGRA KL + + + D +
Sbjct: 596 AGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWR 655
Query: 477 TLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSG 536
TLL ACR R++V + AK++ L P T YVLLSN+YA W DVA R+ +K G
Sbjct: 656 TLLDACRARQNVDLATYAAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRG 715
Query: 537 LKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYML 572
++KEP S IEV F + + SH +I EIN L
Sbjct: 716 IRKEPGCSWIEVNKQIHAFILGDKSHPQIDEINRQL 751
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 193/385 (50%), Gaps = 21/385 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S L+ C A+++G +H + G P ++N ++N+Y K + A+ +FD+M
Sbjct: 287 TYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKM 346
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
ERN+VSW+ MIS + A + A+ + M ++PN + F+S + AC + L +
Sbjct: 347 PERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDL---K 403
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H++ +K G S FV ++LI +Y K+G +AL V+ E + V +N++IA F ++
Sbjct: 404 QLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHS 463
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
++ ++K M R G D+ + L C+ + L G H + K + + + N
Sbjct: 464 DGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVL--KFDQDLILNN 521
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y K + +A+ F + +KD+ISW+T IA + + L++F+ M G +
Sbjct: 522 ALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKV-QGPK 580
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG------NALVNMYAKCGLI 354
P+ T +L AC+ V G + R +N G+ ++++ + +
Sbjct: 581 PNHITILGVLFACSHAGLVNEG----WYYFR-SMNNLYGIDPGREHYGCMLDLLGRAEKL 635
Query: 355 SCSYKLFNEM-LHRNVVSWNTIIAA 378
KL +EM +VV+W T++ A
Sbjct: 636 DDMVKLIHEMNCEPDVVTWRTLLDA 660
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 188/576 (32%), Positives = 307/576 (53%), Gaps = 34/576 (5%)
Query: 34 QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQ 93
+P + N +L YAK + A + F++M+ER++VSW+ MI+ Q+G AL +
Sbjct: 201 RPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVE 260
Query: 94 MH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGY 150
MH + + + S+++ACA + SL G+Q+HA ++ +V ++LI +Y K G
Sbjct: 261 MHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGS 320
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
+A V+ + N VS+ LI G ++ + K E+F M + + D+F+ A +
Sbjct: 321 FKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISG 380
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
C DL G LH L +K V N++++LY+K + AE F + E+D++SW
Sbjct: 381 CFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSW 440
Query: 271 NTFIAACSHCADY-------------------------------EKGLSVFKEMSNDHGV 299
+ I A S + E GL ++ M + V
Sbjct: 441 TSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDV 500
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
PD T+ ++ CA + + + G QI H ++ L +V V NA + MY+KCG IS + K
Sbjct: 501 TPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQK 560
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
LF+ + ++VVSWN +I ++ H +G A K F+ M + G KPD ++++ +L+ C+H+GL
Sbjct: 561 LFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGL 620
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V+EG+ YF+ M + +GISP +EHF+C++DLLGRAG L EA++ K P+ V G LL
Sbjct: 621 VQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALL 680
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
SAC++ + + E AK +F L + Y+LL+ +Y+ G D A RK+++D G+KK
Sbjct: 681 SACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKK 740
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P YS +EV+ F + SH ++ I L L
Sbjct: 741 NPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDEL 776
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 128/544 (23%), Positives = 239/544 (43%), Gaps = 77/544 (14%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
++LLH AL L A +K +P+VI N ++N YAK G + A ++FD M
Sbjct: 43 NTLLHAYFSCGALSDARRLLRADIK---EPNVITHNIMMNGYAKQGSLSDAEELFDRMPR 99
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHL----LPNEYIFASAISACAGIQSLVKGQQ 121
R++ SW+ ++SG+ QA L LE F MH LPN + F + +C + Q
Sbjct: 100 RDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQ 159
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+ KF + V +L+ M+++ GY A ++ + P + N+++AG+ +
Sbjct: 160 LLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYG 219
Query: 182 PEKGFEVFKLML-------------------------------RQGLLPDRFSFAGGLEI 210
+ E F+ M R+G+ D ++ L
Sbjct: 220 IDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTA 279
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
C+ L G LH ++ + +P+V + ++ LY+K EA++ F +++++ +SW
Sbjct: 280 CARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSW 339
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
I + K + +F +M + + D F A++++ C + G+Q+H+ +
Sbjct: 340 TVLIGGSLQYECFSKSVELFNQMRAEL-MAIDQFALATLISGCFNRMDLCLGRQLHSLCL 398
Query: 331 RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA---------- 380
+ N+ + V N+L+++YAKCG + + +F+ M R++VSW ++I A++
Sbjct: 399 KSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKARE 458
Query: 381 -------------NHRLGG--------SALKLFEQM-KATGIKPDSVTFIGLLTACNHAG 418
N LG LK++ M + PD VT++ L C G
Sbjct: 459 FFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIG 518
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL--GQDPIVLG 476
K G+ K G+ ++ I + + G++ EA+ K F L G+D +
Sbjct: 519 ANKLGDQIIGHTVKA-GLILNVSVANAAITMYSKCGRISEAQ---KLFDLLNGKDVVSWN 574
Query: 477 TLLS 480
+++
Sbjct: 575 AMIT 578
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 164/376 (43%), Gaps = 65/376 (17%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDA-LLVYGEA 161
A A+ +C +L + +H + G AS F+ N+L+ Y G SDA L+ +
Sbjct: 7 LADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADI 66
Query: 162 FEPNLV-------------------------------SFNALIAGFVENQQPEKGFEVFK 190
EPN++ S+N L++G+ + ++ G E F
Sbjct: 67 KEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFV 126
Query: 191 LMLRQG-LLPDRFSFAGGLEICS------------------------------VSNDLRK 219
M R G LP+ F+F ++ C V +R
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186
Query: 220 GMILHCLTVKCKLESNP-FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
G + + ++E F N+++A Y+K I A + F + E+D++SWN IAA S
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALS 246
Query: 279 HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
+ L + EM + GVR D T+ S L ACA L S+ GKQ+HA +IR D
Sbjct: 247 QSGRVREALGLVVEM-HRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDP 305
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
V +AL+ +YAKCG + ++FN + RN VSW +I + +++LF QM+A
Sbjct: 306 YVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAE 365
Query: 399 GIKPDSVTFIGLLTAC 414
+ D L++ C
Sbjct: 366 LMAIDQFALATLISGC 381
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 144/319 (45%), Gaps = 53/319 (16%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++++L+ C L G LH+ LK G ++VSN +++LYAKCG + A VF M
Sbjct: 373 ALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSM 432
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFF-------------------------------- 91
SER++VSW++MI+ + Q G + A EFF
Sbjct: 433 SERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYS 492
Query: 92 ---SQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKV 148
SQ + P+ + + CA I + G QI +++K G V N+ I+MY K
Sbjct: 493 AMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKC 552
Query: 149 GYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGL 208
G S+A ++ ++VS+NA+I G+ ++ ++ + F ML +G PD S+ L
Sbjct: 553 GRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVL 612
Query: 209 EICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLI 268
CS S +++G + + + S + M +L+G +A L E KDLI
Sbjct: 613 SGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMV-----DLLG---RAGHLTEAKDLI 664
Query: 269 S----------WNTFIAAC 277
W ++AC
Sbjct: 665 DKMPMKPTAEVWGALLSAC 683
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 169/496 (34%), Positives = 287/496 (57%), Gaps = 3/496 (0%)
Query: 82 GEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV-GNS 140
G L AL+ + L+P+ +++ + C + + +G+ +HA+ + + V N
Sbjct: 69 GTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNI 128
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
+++MY K G DA ++ E ++V++ ALIAGF +N +P +F MLR GL P+
Sbjct: 129 IVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPN 188
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
F+ + L+ + L G LH +K +S+ +VG+ ++ +Y++ + A+ AF
Sbjct: 189 HFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFD 248
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ K +SWN I+ + + E L + +M + +P FT++S+ +ACA + +++
Sbjct: 249 GMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKN-FQPTHFTYSSVFSACASIGALE 307
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
GK +HAH+I+ L +GN L++MYAK G I + ++F+ ++ +VVSWNT++ A
Sbjct: 308 QGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCA 367
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
H LG L FEQM GI+P+ ++F+ +LTAC+H+GL+ EG YF M+K Y + PD+
Sbjct: 368 QHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDV 426
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH 500
H+ +DLLGR G L AE + ++ P+ V G LL ACR+ +++ +G A++ F
Sbjct: 427 PHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFE 486
Query: 501 LQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEF 560
L P + P +LLSN+YAS G W DVA RKM+K+SG+KK+P+ S +E++ F +
Sbjct: 487 LDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDE 546
Query: 561 SHSKIGEINYMLKTLS 576
+H +I EI + +S
Sbjct: 547 THPQIKEIRGKWEEIS 562
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 200/388 (51%), Gaps = 9/388 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
S LL C++ ++QG +HA ++ + +++ N ++N+YAKCG + AR++FDEM
Sbjct: 91 SKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMP 150
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
+++V+W+A+I+G Q AL F QM L PN + +S + A L G Q
Sbjct: 151 TKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQ 210
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+HA+ LK+GY S +VG++L+ MY + G+ A L + + VS+NALI+G +
Sbjct: 211 LHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGE 270
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
E + M R+ P F+++ C+ L +G +H +K L+ F+GNT
Sbjct: 271 GEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNT 330
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y+K I +A++ F + + D++SWNT + C+ ++ L F++M G+ P
Sbjct: 331 LLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRI-GIEP 389
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
++ +F +L AC+ + G + + ++ DV V++ + GL+ + +
Sbjct: 390 NEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFI 449
Query: 362 NEM-LHRNVVSWNTIIAA---HANHRLG 385
EM + W ++ A H N LG
Sbjct: 450 REMPIEPTAAVWGALLGACRMHKNMELG 477
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 159/305 (52%), Gaps = 8/305 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SSLL L G LHA LK G Q V V + ++++YA+CG M A+ FD M
Sbjct: 191 TLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGM 250
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
++ VSW+A+ISGH + GE AL +M + P + ++S SACA I +L +G+
Sbjct: 251 PTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGK 310
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+HA+ +K G I+F+GN+L+ MY K G DA V+ +P++VS+N ++ G ++
Sbjct: 311 WVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHG 370
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
++ + F+ MLR G+ P+ SF L CS S L +G+ L K K+E +
Sbjct: 371 LGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYV 430
Query: 241 TIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGL----SVFKEMSN 295
T + L + L+ AE+ R + E W + AC + E G+ F+ +
Sbjct: 431 TFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPH 490
Query: 296 DHGVR 300
D G R
Sbjct: 491 DSGPR 495
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 187/560 (33%), Positives = 305/560 (54%), Gaps = 7/560 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGI-QPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++ S+L C++T+ +H LK+G+ V V N ++++Y KCG ++KVFDE
Sbjct: 242 TVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDE 301
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
+ ERN++SW+A+I+ G+++ AL+ F M + PN +S + + G
Sbjct: 302 IDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLG 361
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
++H +SLK S F+ NSLI MY K G S A ++ + N+VS+NA+IA F N
Sbjct: 362 MEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARN 421
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ + E+ + M +G P+ +F L C+ L G +H ++ + FV
Sbjct: 422 RLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVS 481
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N + +YSK + A+ F I +D +S+N I S D + L +F EM G+
Sbjct: 482 NALTDMYSKCGCLNLAQNVFN-ISVRDEVSYNILIIGYSRTNDSLESLRLFSEM-RLLGM 539
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
RPD +F +++ACA LA ++ GK+IH L+R + + V N+L+++Y +CG I + K
Sbjct: 540 RPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATK 599
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F + +++V SWNT+I + +A+ LFE MK G++ DSV+F+ +L+AC+H GL
Sbjct: 600 VFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGL 659
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
+++G YF M I P H+ C++DLLGRAG + EA + + + D + G LL
Sbjct: 660 IEKGRKYFKMM-CDLNIEPTHTHYACMVDLLGRAGLMEEAADLIRGLSIIPDTNIWGALL 718
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
ACR+ ++ +G A+ LF L+P Y+LLSN+YA W + R+++K G KK
Sbjct: 719 GACRIHGNIELGLWAAEHLFELKPQHCGYYILLSNMYAEAERWDEANKVRELMKSRGAKK 778
Query: 540 EPSYSMIEVQGTFEKFTVAE 559
P S ++V F V E
Sbjct: 779 NPGCSWVQVGDLVHAFLVGE 798
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 131/423 (30%), Positives = 229/423 (54%), Gaps = 8/423 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L CS +++G +H K+G DV V N +L Y CG A KVFDEM ER+
Sbjct: 143 VLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERD 202
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM-----HLLPNEYIFASAISACAGIQSLVKGQQI 122
VSW+ +I G + AL FF M + P+ S + CA + V + +
Sbjct: 203 KVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIV 262
Query: 123 HAYSLKFGYASISF-VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
H Y+LK G VGN+L+ +Y K G + V+ E E N++S+NA+I F +
Sbjct: 263 HCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGK 322
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+VF+LM+ +G+ P+ + + L + + GM +H ++K +ES+ F+ N+
Sbjct: 323 YMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNS 382
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y+K A F + ++++SWN IA + + + + ++M G P
Sbjct: 383 LIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQA-KGETP 441
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
++ TF ++L ACA L + GK+IHA +IR+ + D+ V NAL +MY+KCG ++ + +F
Sbjct: 442 NNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVF 501
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
N + R+ VS+N +I ++ +L+LF +M+ G++PD V+F+G+++AC + ++
Sbjct: 502 NISV-RDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIR 560
Query: 422 EGE 424
+G+
Sbjct: 561 QGK 563
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 134/467 (28%), Positives = 222/467 (47%), Gaps = 28/467 (5%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE- 65
+LL C+ L Q +HA L G P + + C +IL F S
Sbjct: 39 NLLQLCTLCDTLSQTKQVHAYSLLHGFLPRSV---------SLCASLILQYASFGHPSNS 89
Query: 66 -----------RNLVSWSAMISGHHQAG--EHLLALEFFSQMHLLPNEYIFASAISACAG 112
R+ W+ +I + AG + + + P+E + + C+
Sbjct: 90 LLLFQHSVAYSRSAFLWNTLIRANSIAGVFDGFGTYNTMVRAGVKPDECTYPFVLKVCSD 149
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
+ KG+++H + K G+ FVGN+L++ Y G DA+ V+ E E + VS+N +
Sbjct: 150 FVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTV 209
Query: 173 IAGFVENQQPEKGFEVFKLML--RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC 230
I + E+ F++M+ + G+ PD + L +C+ + D I+HC +K
Sbjct: 210 IGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKV 269
Query: 231 KLESNPF-VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSV 289
L VGN ++ +Y K ++K F I+E+++ISWN I + S Y L V
Sbjct: 270 GLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDV 329
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
F+ M D G+RP+ T +S+L L + G ++H ++M + DV + N+L++MYA
Sbjct: 330 FRLMI-DEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYA 388
Query: 350 KCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
K G + +FN+M RN+VSWN +IA A +RL A++L QM+A G P++VTF
Sbjct: 389 KSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTN 448
Query: 410 LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+L AC G + G+ + + G S D+ L D+ + G L
Sbjct: 449 VLPACARLGFLNVGKEIHARIIRV-GSSLDLFVSNALTDMYSKCGCL 494
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 188/634 (29%), Positives = 330/634 (52%), Gaps = 62/634 (9%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ +L C + + + G + H + G + +V + N ++ +Y++CG + A +FDE+
Sbjct: 157 TLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEI 216
Query: 64 SER---NLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNE---------YIFASAISACA 111
++R +++SW++++S H ++ AL+ FS+M L+ +E + + AC
Sbjct: 217 TQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACG 276
Query: 112 GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNA 171
++++ + +++H +++ G FVGN+LI Y K G +A+ V+ ++VS+NA
Sbjct: 277 SLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNA 336
Query: 172 LIAGFVENQQPEKGFEVFKLMLRQ-----------------------------------G 196
++AG+ ++ E FE+FK M ++ G
Sbjct: 337 MVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSG 396
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK-CKLE-SNPFVG--------NTIMALY 246
LP+ + L C+ +G +H ++K C L N F G N ++ +Y
Sbjct: 397 SLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMY 456
Query: 247 SKFNLIGEAEKAFRLI--EEKDLISWNTFIAACSHCADYEKGLSVFKEM-SNDHGVRPDD 303
SK A F I EE+++++W I + D L +F EM S +GV P+
Sbjct: 457 SKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNA 516
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG--VGNALVNMYAKCGLISCSYKLF 361
+T + IL ACA LA+++ GKQIHA+++R + V N L++MY+KCG + + +F
Sbjct: 517 YTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVF 576
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ M ++ +SW +++ + H G AL +F++M+ G PD +TF+ +L AC+H G+V
Sbjct: 577 DSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVD 636
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+G +YF+SM YG++P EH+ C IDLL R+G+L +A K P+ +V LLSA
Sbjct: 637 QGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSA 696
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
CR+ +V + E +L + Y L+SN+YA+ G W DVA R ++K SG+KK P
Sbjct: 697 CRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRP 756
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S ++ Q F V + SH +I +L++L
Sbjct: 757 GCSWVQGQKGTASFFVGDRSHPLSPQIYALLESL 790
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 211/480 (43%), Gaps = 63/480 (13%)
Query: 43 VLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPN 99
V+ Y CG A V + ++ V W+ +I H + G A+ +M P+
Sbjct: 95 VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPD 154
Query: 100 EYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG 159
+ + AC + S G H G+ S F+ N+L++MY + G +A +++
Sbjct: 155 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 214
Query: 160 EAFE---PNLVSFNALIAGFVENQQPEKGFEVF-KLMLRQGLLP-----DRFSFAGGLEI 210
E + +++S+N++++ V++ ++F K+ L P D S L
Sbjct: 215 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPA 274
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
C + + +H ++ + FVGN ++ Y+K L+ A K F ++E KD++SW
Sbjct: 275 CGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSW 334
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDH--------------------------------- 297
N +A S ++E +FK M ++
Sbjct: 335 NAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIF 394
Query: 298 -GVRPDDFTFASILAACAGLASVQHGKQIHAHLIR---MRLNQDVG-------VGNALVN 346
G P+ T S+L+ACA L + G +IHA+ ++ + L+ D G V NAL++
Sbjct: 395 SGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALID 454
Query: 347 MYAKCGLISCSYKLFNEML--HRNVVSWNTIIAAHANHRLGGSALKLFEQM--KATGIKP 402
MY+KC + +F+++ RNVV+W +I HA + ALKLF +M + G+ P
Sbjct: 455 MYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAP 514
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF--TCLIDLLGRAGKLLEAE 460
++ T +L AC H ++ G+ + + + +F CLID+ + G + A
Sbjct: 515 NAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESS-AYFVANCLIDMYSKCGDVDTAR 573
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 172/395 (43%), Gaps = 52/395 (13%)
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
+G +++ Y+ G + ALLV V +N LI ++ + + V MLR G
Sbjct: 91 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 150
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
PD F+ L+ C R G H L ESN F+ N ++A+YS+ + EA
Sbjct: 151 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 210
Query: 257 KAFRLIEEK---DLISWNTFIAACSHCADYEKGLSVFKEMS-----NDHGVRPDDFTFAS 308
F I ++ D+ISWN+ ++A ++ L +F +M+ R D + +
Sbjct: 211 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 270
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
IL AC L +V K++H + IR DV VGNAL++ YAKCGL+ + K+FN M ++
Sbjct: 271 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 330
Query: 369 VVSWN-----------------------------------TIIAAHANHRLGGSALKLFE 393
VVSWN +IA ++ AL LF
Sbjct: 331 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 390
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEG-EAYFNSMEKTY--------GISPDIEHFT 444
QM +G P+ VT I +L+AC G +G E + S++ G D+ +
Sbjct: 391 QMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 450
Query: 445 CLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
LID+ + A PL + +V T++
Sbjct: 451 ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVM 485
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPD--VIVSNHVLNLYAKCGKMILARKV 59
A +IS +L C+ A++ G +HA VL+ V+N ++++Y+KCG + AR V
Sbjct: 516 AYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHV 575
Query: 60 FDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
FD MS+++ +SW++M++G+ G AL+ F +M +P++ F + AC+
Sbjct: 576 FDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACS 630
>gi|326507410|dbj|BAK03098.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 698
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 187/563 (33%), Positives = 311/563 (55%), Gaps = 11/563 (1%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G LH+ +K G+ +V + +L++YAKCG+ A ++FD M ERN VSW+A+++G+ +
Sbjct: 120 GTQLHSLAVKAGLADNVFSATALLHMYAKCGRTRDACRLFDGMPERNTVSWNALVAGYVE 179
Query: 81 AGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
+G+ A++ F +M LP+E FA+ ++ + Q+H +K+G A V
Sbjct: 180 SGKVAPAVQLFVEMEREGFLPDEATFAALLTVVNDSTCFLM-HQLHGKIVKYGSALGLIV 238
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFE-PNLVSFNALIAGFVENQQPEKGFEVFKLMLR-Q 195
N+ I+ Y + G +++ ++ E + +L+S+NA++ + + + F M+R
Sbjct: 239 LNAAITAYSQCGALANSRRIFDEIGDRSDLISWNAMLGAYATHGMEHEAMRFFASMMRAS 298
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN---LI 252
G+ PD +SF + C+ D G ++H L K E V N ++A+Y++F+ ++
Sbjct: 299 GVQPDMYSFTSIISACAEHRD-HGGTVIHGLVSKNGFEGVTHVCNALIAMYTRFSENCMM 357
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
+A K F + KD +SWN+ + S L F+ M +++ + D++ F++ L +
Sbjct: 358 EDAYKCFDSLLLKDTVSWNSMLTGYSQHGLSADALRFFRCMQSEN-ITTDEYAFSAALRS 416
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
C+ LA ++ G+QIH +IR + V ++L+ MY+K G++ + K F E + V W
Sbjct: 417 CSDLALLRLGRQIHGLVIRSGFASNNFVSSSLIFMYSKSGILDDAMKSFEEADKSSSVPW 476
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
N+++ +A H + LF QM + D +TF+GL+TAC+HAGLV EG N+ME
Sbjct: 477 NSMMFGYAQHGKAQAVRSLFNQMLELKVPLDHITFVGLITACSHAGLVDEGSEILNTMES 536
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGE 492
YGI +EH+ C IDL GRAG+L +A+E P D +V TLL ACR+ ++ +
Sbjct: 537 RYGIPLRMEHYACGIDLYGRAGQLDKAKELIDSMPFEPDAMVWMTLLGACRVHGNMELAS 596
Query: 493 RLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTF 552
+A L +P S YVLLSN+Y+ GMW D A +K +K+ GL K P +S IEV+
Sbjct: 597 DVASHLLEAEPRQHSTYVLLSNMYSGLGMWSDRAIVQKEMKNKGLSKVPGWSWIEVKNEV 656
Query: 553 EKFTVAEFSHSKIGEINYMLKTL 575
F + SH ++ EI ML L
Sbjct: 657 HSFNAEDGSHPRMDEIYEMLSLL 679
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 206/415 (49%), Gaps = 25/415 (6%)
Query: 25 HAAVLKMGIQPDVIVSNHVLNLYAKCGK-MILARKVFDEMSERNLVSWSAMISGHHQAGE 83
HA +LK G+ N +L Y+ + AR++FDE+ + SW+++++ H G
Sbjct: 23 HATLLKSGVTSPTPW-NQLLTAYSVSSPGLAAARRLFDEIPRLDAASWNSLLAAHVSIGA 81
Query: 84 HLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
H A MH L N + SA+ + A + G Q+H+ ++K G A F +
Sbjct: 82 HPAACRLLRAMHERGLAANTFALGSALRSAAAMGCSALGTQLHSLAVKAGLADNVFSATA 141
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
L+ MY K G + DA ++ E N VS+NAL+AG+VE+ + ++F M R+G LPD
Sbjct: 142 LLHMYAKCGRTRDACRLFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEMEREGFLPD 201
Query: 201 RFSFAGGLEICSVSNDLRKGMI--LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKA 258
+FA + +V ND ++ LH VK V N + YS+ + + +
Sbjct: 202 EATFAA---LLTVVNDSTCFLMHQLHGKIVKYGSALGLIVLNAAITAYSQCGALANSRRI 258
Query: 259 FRLIEEK-DLISWNTFIAA-CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
F I ++ DLISWN + A +H ++E + F M GV+PD ++F SI++ACA
Sbjct: 259 FDEIGDRSDLISWNAMLGAYATHGMEHE-AMRFFASMMRASGVQPDMYSFTSIISACA-- 315
Query: 317 ASVQH----GKQIHAHLIRMRLNQDVGVGNALVNMYAKCG---LISCSYKLFNEMLHRNV 369
+H G IH + + V NAL+ MY + ++ +YK F+ +L ++
Sbjct: 316 ---EHRDHGGTVIHGLVSKNGFEGVTHVCNALIAMYTRFSENCMMEDAYKCFDSLLLKDT 372
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
VSWN+++ ++ H L AL+ F M++ I D F L +C+ L++ G
Sbjct: 373 VSWNSMLTGYSQHGLSADALRFFRCMQSENITTDEYAFSAALRSCSDLALLRLGR 427
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 234 SNPFVGNTIMALYSKFNL-IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
++P N ++ YS + + A + F I D SWN+ +AA + + +
Sbjct: 32 TSPTPWNQLLTAYSVSSPGLAAARRLFDEIPRLDAASWNSLLAAHVSIGAHPAACRLLRA 91
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
M ++ G+ + F S L + A + G Q+H+ ++ L +V AL++MYAKCG
Sbjct: 92 M-HERGLAANTFALGSALRSAAAMGCSALGTQLHSLAVKAGLADNVFSATALLHMYAKCG 150
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
+ +LF+ M RN VSWN ++A + A++LF +M+ G PD TF LLT
Sbjct: 151 RTRDACRLFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEMEREGFLPDEATFAALLT 210
Query: 413 ACN----------HAGLVKEGEA 425
N H +VK G A
Sbjct: 211 VVNDSTCFLMHQLHGKIVKYGSA 233
>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 769
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 188/577 (32%), Positives = 306/577 (53%), Gaps = 12/577 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S++ C+ + G LHA V+K+ +I N ++ +Y + +M A KVF + +
Sbjct: 170 SIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAK 229
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISACAGIQSLVKGQQI 122
+L+SWS++I+G Q G AL +M PNEYIF S++ AC+ + G QI
Sbjct: 230 DLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQI 289
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H +K + G SL MY + G+ A V+ + P+ S+N +IAG N
Sbjct: 290 HGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYA 349
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
++ VF M G +PD S L + L +GM +H +KC ++ V N++
Sbjct: 350 DEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSL 409
Query: 243 MALYSKFNLIGEAEKAFRLIEE----KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
+ +Y+ + F L E+ D +SWN + AC + L +FK M
Sbjct: 410 LTMYT---FCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSE- 465
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
PD T ++L C ++S++ G Q+H + + L + + N L++MYAKCG + +
Sbjct: 466 CEPDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQAR 525
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
++F+ M + +VVSW+T+I +A G AL LF +MK++GI+P+ VTF+G+LTAC+H G
Sbjct: 526 RIFDSMDNGDVVSWSTLIVGYAQSGFGEEALILFREMKSSGIEPNHVTFVGVLTACSHVG 585
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV+EG + M+ +GISP EH +C++DLL RAG L EAE + + L D +V TL
Sbjct: 586 LVEEGLKLYAIMQTEHGISPTKEHCSCVVDLLARAGHLNEAERFIDEMKLEPDVVVWKTL 645
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
LSAC+ + +V + ++ A+ + + P ++ +VLL +++AS G W D A R +K +K
Sbjct: 646 LSACKTQGNVDLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWEDAALLRSSMKKHDVK 705
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
K P S I+V+ F + H + +I +L +
Sbjct: 706 KIPGQSWIDVEDKIHIFFAEDVLHPERDDIYTVLHNI 742
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 153/480 (31%), Positives = 248/480 (51%), Gaps = 12/480 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
SL+ CS +++L QG +H +L + D I++NH+L++Y KCG + AR+VFD M ER
Sbjct: 69 SLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPER 128
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
NLVS++++I+G+ Q G+ A+ + +M L+P+++ F S I ACA +V G+Q+H
Sbjct: 129 NLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLH 188
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A +K +S N+LI+MY++ SDA V+ +L+S++++IAGF +
Sbjct: 189 AQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEF 248
Query: 184 KGFEVFKLMLRQGLL-PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
+ K ML G+ P+ + F L+ CS G +H L +K +L N G ++
Sbjct: 249 EALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSL 308
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+Y++ + A + F IE D SWN IA ++ ++ +SVF EM N G PD
Sbjct: 309 CDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNS-GFIPD 367
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+ S+L A ++ G QIH+ +I+ D+ V N+L+ MY C + C + LF
Sbjct: 368 AISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFE 427
Query: 363 EMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ ++ + VSWN I+ A H L+LF+ M + +PD +T LL C +K
Sbjct: 428 DFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLK 487
Query: 422 EGEAYFNSMEKTYGISPDIEHF--TCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
G KT + +E F LID+ + G L +A G D + TL+
Sbjct: 488 LGSQVHCYSWKTGLV---LEQFIKNGLIDMYAKCGSLRQARRIFDSMDNG-DVVSWSTLI 543
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 173/311 (55%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+ S I AC+ +SL +G++IH + L + + N ++SMY K G DA V+
Sbjct: 67 YISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMP 126
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
E NLVS+ ++I G+ +N Q + ++ ML+ L+PD+F+F ++ C+ + D+ G
Sbjct: 127 ERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQ 186
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
LH +K + S+ N ++A+Y +FN + +A K F I KDLISW++ IA S
Sbjct: 187 LHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGF 246
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
+ LS KEM + P+++ F S L AC+ L +G QIH I++ L + G
Sbjct: 247 EFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGC 306
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
+L +MYA+CG + + ++FN++ + SWN IIA AN+ A+ +F +M+ +G P
Sbjct: 307 SLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIP 366
Query: 403 DSVTFIGLLTA 413
D+++ LL A
Sbjct: 367 DAISLRSLLCA 377
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 137/282 (48%), Gaps = 6/282 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A S+ SLL +K AL QG+ +H+ ++K G D+ V N +L +Y C + +F+
Sbjct: 368 AISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFE 427
Query: 62 EMSER-NLVSWSAMISG---HHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLV 117
+ + + VSW+A+++ H Q E L + P+ + + C I SL
Sbjct: 428 DFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLK 487
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G Q+H YS K G F+ N LI MY K G A ++ ++VS++ LI G+
Sbjct: 488 LGSQVHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMDNGDVVSWSTLIVGYA 547
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHC-LTVKCKLESNP 236
++ E+ +F+ M G+ P+ +F G L CS + +G+ L+ + + +
Sbjct: 548 QSGFGEEALILFREMKSSGIEPNHVTFVGVLTACSHVGLVEEGLKLYAIMQTEHGISPTK 607
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAAC 277
+ ++ L ++ + EAE+ ++ E D++ W T ++AC
Sbjct: 608 EHCSCVVDLLARAGHLNEAERFIDEMKLEPDVVVWKTLLSAC 649
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 73/142 (51%)
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
Y + L F + + T+ S++ AC+ S+ G++IH H++ D + N
Sbjct: 44 YREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNN 103
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
+++MY KCG + + ++F+ M RN+VS+ ++I ++ + A+ L+ +M + P
Sbjct: 104 HILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVP 163
Query: 403 DSVTFIGLLTACNHAGLVKEGE 424
D F ++ AC AG V G+
Sbjct: 164 DQFAFGSIIKACACAGDVVLGK 185
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 192/575 (33%), Positives = 316/575 (54%), Gaps = 9/575 (1%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
L C+ + G+ + A ++ G + V + ++N K G + A+KVFD M E+++
Sbjct: 152 LKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDV 211
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK--GQQIH 123
V W+++I G+ Q G +++ F +M L P+ A+ + AC QS +K G H
Sbjct: 212 VCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACG--QSGLKKVGMCAH 269
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+Y L G + FV SL+ MY +G + A LV+ +L+S+NA+I+G+V+N
Sbjct: 270 SYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIP 329
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ + +F+ +++ G D + + CS ++DL G ILH ++ +LES+ + I+
Sbjct: 330 ESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIV 389
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+YSK I +A F + +K++I+W + S E L +F +M + V +
Sbjct: 390 DMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEK-VAANS 448
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T S++ CA L S+ G+ +HAH IR D + +AL++MYAKCG I + KLFN
Sbjct: 449 VTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNN 508
Query: 364 MLH-RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
H ++V+ N++I + H G AL ++ +M +KP+ TF+ LLTAC+H+GLV+E
Sbjct: 509 EFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEE 568
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G+A F+SME+ + + P +H+ CL+DL RAG+L EA+E K+ P VL LLS C
Sbjct: 569 GKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGC 628
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
R ++ +G ++A +L L + YV+LSN+YA W V R +++ G+KK P
Sbjct: 629 RTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIRGLMRMQGMKKIPG 688
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
YS+IEV F ++ SH +I +L+ L L
Sbjct: 689 YSLIEVGNKVYTFFASDDSHPSWADIYQLLENLRL 723
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 238/478 (49%), Gaps = 9/478 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
SSLLH S T L S+HA ++K + + ++ ++ +Y+ G + AR VFD+ S
Sbjct: 50 SSLLHQFSNT--LIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSL 107
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQI 122
+AMI+G + +H+ F M + N Y A+ AC + G +I
Sbjct: 108 PETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEI 167
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
+++ G+ +VG+S+++ +K GY +DA V+ E ++V +N++I G+V+
Sbjct: 168 IRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLF 227
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
+ ++F M+ GL P + A L+ C S + GM H + + ++ FV ++
Sbjct: 228 WESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSL 287
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +YS G A F + + LISWN I+ + ++F+ + G D
Sbjct: 288 VDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQS-GSGFD 346
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
T S++ C+ + +++G+ +H+ +IR L + + A+V+MY+KCG I + +F
Sbjct: 347 SGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFG 406
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
M +NV++W ++ + + ALKLF QM+ + +SVT + L+ C H G + +
Sbjct: 407 RMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTK 466
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE-YTKKFPLGQDPIVLGTLL 479
G + +G + D + LID+ + GK+ AE+ + +F L +D I+ +++
Sbjct: 467 GRTVHAHFIR-HGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHL-KDVILCNSMI 522
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 175/369 (47%), Gaps = 12/369 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++++LL C ++ + G+ H+ VL +G+ DV V ++++Y+ G A VFD M
Sbjct: 248 TMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSM 307
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEY---IFASAISACAGIQSLVKGQ 120
R+L+SW+AMISG+ Q G + F ++ + + S I C+ L G+
Sbjct: 308 CSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGR 367
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H+ ++ S + +++ MY K G A +V+G + N++++ A++ G +N
Sbjct: 368 ILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNG 427
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E ++F M + + + + + C+ L KG +H ++ + + +
Sbjct: 428 YAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITS 487
Query: 241 TIMALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ +Y+K I AEK F KD+I N+ I L V+ M + +
Sbjct: 488 ALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEER-L 546
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN----ALVNMYAKCGLIS 355
+P+ TF S+L AC+ V+ GK + + R + DV + LV+++++ G +
Sbjct: 547 KPNQTTFVSLLTACSHSGLVEEGKALFHSMER---DHDVRPQHKHYACLVDLHSRAGRLE 603
Query: 356 CSYKLFNEM 364
+ +L +M
Sbjct: 604 EADELVKQM 612
>gi|357441891|ref|XP_003591223.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480271|gb|AES61474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 606
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 186/549 (33%), Positives = 298/549 (54%), Gaps = 13/549 (2%)
Query: 32 GIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFF 91
G+ D+I S Y G A +FDEM R++++W++MI+G+ H A F
Sbjct: 42 GLTTDLIKS------YFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVF 95
Query: 92 SQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS-FVGNSLISMYMK 147
+ M + PN + ++ + AC +++L+ G+ +H ++K G S +V N+L+ MY
Sbjct: 96 TNMLRDGVKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYAT 155
Query: 148 VGYSSD-ALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAG 206
S D A LV+ + N VS+ LI G+ + G VF+ M + FSF+
Sbjct: 156 CCDSMDNARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSI 215
Query: 207 GLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKD 266
+ C+ G +H + ESN V N I+ +Y + EA++ F + +KD
Sbjct: 216 AVSACASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKD 275
Query: 267 LISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
I+WNT IA YE L +F +M ++ G P+ FTF S++AACA LA + G+Q+H
Sbjct: 276 TITWNTLIAGFETLDSYES-LCIFSQMVSE-GFSPNCFTFTSVIAACANLAILYCGQQLH 333
Query: 327 AHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGG 386
+I L+ ++ + NAL++MYAKCG ++ S+K+F+ M H N+VSW +++ + H G
Sbjct: 334 GGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGK 393
Query: 387 SALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCL 446
A+ LF +M +GIKPD + F+ +L+AC+HAGLV EG YF M Y ++PD + + C+
Sbjct: 394 EAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACV 453
Query: 447 IDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTT 506
+DLL RAG++ EA E + P D + LL AC+ + I + A ++ ++P
Sbjct: 454 VDLLSRAGRVKEAYELIENMPFKPDESIWVALLGACKKYKQPSIQKLAALKVLEMKPNKA 513
Query: 507 SPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIG 566
YVLLSN A++G W D A RK+++ + KKE S IE++ F V + S
Sbjct: 514 GTYVLLSNFSAAEGNWADFASLRKLMRSTKSKKEVGRSWIELKNQVCSFIVGDIFDSSNK 573
Query: 567 EINYMLKTL 575
E+ +L+ L
Sbjct: 574 EVCEVLELL 582
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 211/419 (50%), Gaps = 13/419 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQ-PDVIVSNHVLNLYAK-CGKMILARKV 59
A ++S++L C KAL G +H +K+G Q + V N ++++YA C M AR V
Sbjct: 107 AFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNARLV 166
Query: 60 FDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNE---YIFASAISACAGIQSL 116
F+++ +N VSW+ +I+G+ + L F QM + E + F+ A+SACA I S
Sbjct: 167 FEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGSS 226
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G+Q+HA + G+ S V N+++ MY + +S+A ++GE + + +++N LIAGF
Sbjct: 227 NLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGF 286
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
E + +F M+ +G P+ F+F + C+ L G LH + L++N
Sbjct: 287 -ETLDSYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNL 345
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
+ N ++ +Y+K + ++ K F + +L+SW + + ++ + +F EM
Sbjct: 346 ELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGS 405
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN--QDVGVGNALVNMYAKCGLI 354
G++PD F ++L+AC+ V G + + L+ N D + +V++ ++ G +
Sbjct: 406 -GIKPDKIVFMAVLSACSHAGLVDEGLR-YFRLMTSYYNVAPDRDIYACVVDLLSRAGRV 463
Query: 355 SCSYKLFNEMLHRNVVS-WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
+Y+L M + S W ++ A ++ +++ +K +KP+ LL+
Sbjct: 464 KEAYELIENMPFKPDESIWVALLGACKKYK--QPSIQKLAALKVLEMKPNKAGTYVLLS 520
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 170/336 (50%), Gaps = 7/336 (2%)
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
F ++ + LI Y G +A ++ E +++++ ++I G+ + + V
Sbjct: 35 FNPKDLTGLTTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNV 94
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE-SNPFVGNTIMALYS 247
F MLR G+ P+ F+ + L+ C L G ++H L +K + S+ +V N +M +Y+
Sbjct: 95 FTNMLRDGVKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYA 154
Query: 248 K-FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG-VRPDDFT 305
+ + A F I K+ +SW T I +H D GL VF++M + G + P F+
Sbjct: 155 TCCDSMDNARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSP--FS 212
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
F+ ++ACA + S GKQ+HA +I ++ V NA+++MY +C S + +LF EM
Sbjct: 213 FSIAVSACASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMT 272
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
++ ++WNT+IA +L +F QM + G P+ TF ++ AC + ++ G+
Sbjct: 273 QKDTITWNTLIAGFETLD-SYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQ 331
Query: 426 YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ G+ ++E LID+ + G + ++ +
Sbjct: 332 LHGGIIHR-GLDNNLELSNALIDMYAKCGNVADSHK 366
>gi|356565918|ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Glycine max]
Length = 703
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 187/581 (32%), Positives = 315/581 (54%), Gaps = 7/581 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+++ S+L + L+ G LH+ +LK+G+ +V + +L++YAKCG++ VF
Sbjct: 94 SRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSGSALLDMYAKCGRVDDGYVVFQ 153
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEY---IFASAISACAGIQSLVK 118
M ERN VSW+ +++ + + G+ +A S M L E + ++
Sbjct: 154 SMPERNYVSWNTLVASYSRVGDCDMAFWVLSCMELEGVEIDDGTVSPLLTLLDNAMFYKL 213
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY-GEAFEPNLVSFNALIAGFV 177
Q+H +K G + V N+ I+ Y + DA V+ G +LV++N+++ ++
Sbjct: 214 TMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAERVFDGAVLCRDLVTWNSMLGAYL 273
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+++ + F+VF M G PD +++ G + CSV G LH L +K L+++
Sbjct: 274 MHEKEDLAFKVFLDMQNFGFEPDAYTYTGIVGACSVQEHKTCGKCLHGLVIKRGLDNSVP 333
Query: 238 VGNTIMALYSKFN--LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
V N ++++Y +FN + +A + F ++ KD +WN+ +A E L +F +M
Sbjct: 334 VSNALISMYIRFNDRCMEDALRIFFSMDLKDCCTWNSILAGYVQVGLSEDALRLFLQMRC 393
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
+ D +TF++++ +C+ LA++Q G+Q H +++ + + VG++L+ MY+KCG+I
Sbjct: 394 -LVIEIDHYTFSAVIRSCSDLATLQLGQQFHVLALKVGFDTNSYVGSSLIFMYSKCGIIE 452
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ K F N + WN+II +A H G AL LF MK +K D +TF+ +LTAC+
Sbjct: 453 DARKSFEATSKDNAIVWNSIIFGYAQHGQGNIALDLFYMMKERKVKLDHITFVAVLTACS 512
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
H GLV+EG + SME +GI P EH+ C IDL GRAG L +A + P D +VL
Sbjct: 513 HNGLVEEGCNFIESMESDFGIPPRQEHYACAIDLYGRAGHLKKATALVETMPFEPDAMVL 572
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
TLL ACR D+ + ++AK L L+P YV+LS +Y MWG+ A +M+++
Sbjct: 573 KTLLGACRFCGDIELASQIAKILLELEPEEHCTYVILSEMYGRFKMWGEKASVTRMMRER 632
Query: 536 GLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
G+KK P +S IEV+ F + SH + EI +L+ L+
Sbjct: 633 GVKKVPGWSWIEVKNNVHAFNAEDHSHPQCEEIYILLQQLN 673
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 204/411 (49%), Gaps = 7/411 (1%)
Query: 22 ISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQA 81
I+ H +K+G D +N+++ YAKC ++ A +VFDEM R+ VSW+A+IS +
Sbjct: 13 IATHCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASS 72
Query: 82 GEHLLALEFFSQMHLLPNEY---IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVG 138
G+ + M + + F S + A + L GQQ+H+ LK G + F G
Sbjct: 73 GDLDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSG 132
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL 198
++L+ MY K G D +V+ E N VS+N L+A + + F V M +G+
Sbjct: 133 SALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCMELEGVE 192
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKA 258
D + + L + + + M LHC VK LE V N + YS+ + +AE+
Sbjct: 193 IDDGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAERV 252
Query: 259 FR-LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F + +DL++WN+ + A + VF +M N G PD +T+ I+ AC+
Sbjct: 253 FDGAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQN-FGFEPDAYTYTGIVGACSVQE 311
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG--LISCSYKLFNEMLHRNVVSWNTI 375
GK +H +I+ L+ V V NAL++MY + + + ++F M ++ +WN+I
Sbjct: 312 HKTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMEDALRIFFSMDLKDCCTWNSI 371
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
+A + L AL+LF QM+ I+ D TF ++ +C+ ++ G+ +
Sbjct: 372 LAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQQF 422
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 14/219 (6%)
Query: 224 HCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY 283
HC +K ++P+ N ++ Y+K + A + F + +D +SWN I+A + D
Sbjct: 16 HCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGDL 75
Query: 284 EKGLSVFKEMS-NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
+ + M + H D TF SIL A + ++ G+Q+H+ ++++ L+++V G+
Sbjct: 76 DTTWQLLGAMRRSTHAF--DSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSGS 133
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
AL++MYAKCG + Y +F M RN VSWNT++A+++ A + M+ G++
Sbjct: 134 ALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCMELEGVEI 193
Query: 403 DSVTFIGLLTACN-----------HAGLVKEGEAYFNSM 430
D T LLT + H +VK G FN++
Sbjct: 194 DDGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTV 232
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
H I++ D N L+ YAKC ++ ++++F+EM HR+ VSWN II+A A+
Sbjct: 16 HCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGDL 75
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
+ +L M+ + DS TF +L + G +K G+ + M K G+S ++ +
Sbjct: 76 DTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKV-GLSENVFSGSA 134
Query: 446 LIDLLGRAGKLLEAEEYTKKFP 467
L+D+ + G++ + + P
Sbjct: 135 LLDMYAKCGRVDDGYVVFQSMP 156
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 169/497 (34%), Positives = 287/497 (57%), Gaps = 3/497 (0%)
Query: 81 AGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV-GN 139
G L AL+ + L+P+ +++ + C + + +G+ +HA+ + + V N
Sbjct: 68 GGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQN 127
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
+++MY K G DA ++ E ++V++ ALIAGF +N +P +F MLR G P
Sbjct: 128 IIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQP 187
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
+ F+ + L+ + L G LH +K +S+ +VG+ ++ +Y++ + A+ AF
Sbjct: 188 NHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAF 247
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+ K +SWN I+ + + E L + +M + +P FT++S+L+ACA + ++
Sbjct: 248 DGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKN-FQPTHFTYSSVLSACASIGAL 306
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
+ GK +HAH+I+ L +GN L++MYAK G I + ++F+ ++ +VVSWNT++
Sbjct: 307 EQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGC 366
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
A H LG L FEQM GI+P+ ++F+ +LTAC+H+GL+ EG YF M+K Y + PD
Sbjct: 367 AQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPD 425
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLF 499
+ H+ +DLLGR G L AE + ++ P+ V G LL ACR+ +++ +G A++ F
Sbjct: 426 VPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAF 485
Query: 500 HLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAE 559
L P + P +LLSN+YAS G W DVA RKM+K+SG+KK+P+ S +E++ F +
Sbjct: 486 ELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVAND 545
Query: 560 FSHSKIGEINYMLKTLS 576
+H +I EI + +S
Sbjct: 546 ETHPRIKEIRGKWEEIS 562
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 201/388 (51%), Gaps = 9/388 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
S LL C++ ++QG +HA ++ + +++ N ++N+YAKCG + AR++FDEM
Sbjct: 91 SKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMP 150
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQ 121
+++V+W+A+I+G Q AL F QM L PN + +S + A L G Q
Sbjct: 151 TKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQ 210
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+HA+ LK+GY S +VG++L+ MY + G+ A L + + VS+NALI+G +
Sbjct: 211 LHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGE 270
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
E + M R+ P F+++ L C+ L +G +H +K L+ F+GNT
Sbjct: 271 GEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNT 330
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y+K I +A++ F + + D++SWNT + C+ ++ L F++M G+ P
Sbjct: 331 LLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLR-IGIEP 389
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
++ +F +L AC+ + G + + ++ DV V++ + GL+ + +
Sbjct: 390 NEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFI 449
Query: 362 NEM-LHRNVVSWNTIIAA---HANHRLG 385
EM + W ++ A H N LG
Sbjct: 450 REMPIEPTAAVWGALLGACRMHKNMELG 477
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 160/305 (52%), Gaps = 8/305 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SSLL L G LHA LK G Q V V + ++++YA+CG M A+ FD M
Sbjct: 191 TLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGM 250
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
++ VSW+A+ISGH + GE AL +M + P + ++S +SACA I +L +G+
Sbjct: 251 PTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGK 310
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+HA+ +K G I+F+GN+L+ MY K G DA V+ +P++VS+N ++ G ++
Sbjct: 311 WVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHG 370
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
++ + F+ MLR G+ P+ SF L CS S L +G+ L K K+E +
Sbjct: 371 LGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYV 430
Query: 241 TIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGL----SVFKEMSN 295
T + L + L+ AE+ R + E W + AC + E G+ F+ +
Sbjct: 431 TFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPH 490
Query: 296 DHGVR 300
D G R
Sbjct: 491 DSGPR 495
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 188/634 (29%), Positives = 330/634 (52%), Gaps = 62/634 (9%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ +L C + + + G + H + G + +V + N ++ +Y++CG + A +FDE+
Sbjct: 164 TLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEI 223
Query: 64 SER---NLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNE---------YIFASAISACA 111
++R +++SW++++S H ++ AL+ FS+M L+ +E + + AC
Sbjct: 224 TQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACG 283
Query: 112 GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNA 171
++++ + +++H +++ G FVGN+LI Y K G +A+ V+ ++VS+NA
Sbjct: 284 SLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNA 343
Query: 172 LIAGFVENQQPEKGFEVFKLMLRQ-----------------------------------G 196
++AG+ ++ E FE+FK M ++ G
Sbjct: 344 MVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSG 403
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK-CKLE-SNPFVG--------NTIMALY 246
LP+ + L C+ +G +H ++K C L N F G N ++ +Y
Sbjct: 404 SLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMY 463
Query: 247 SKFNLIGEAEKAFRLI--EEKDLISWNTFIAACSHCADYEKGLSVFKEM-SNDHGVRPDD 303
SK A F I EE+++++W I + D L +F EM S +GV P+
Sbjct: 464 SKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNA 523
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG--VGNALVNMYAKCGLISCSYKLF 361
+T + IL ACA LA+++ GKQIHA+++R + V N L++MY+KCG + + +F
Sbjct: 524 YTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVF 583
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ M ++ +SW +++ + H G AL +F++M+ G PD +TF+ +L AC+H G+V
Sbjct: 584 DSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVD 643
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+G +YF+SM YG++P EH+ C IDLL R+G+L +A K P+ +V LLSA
Sbjct: 644 QGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSA 703
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
CR+ +V + E +L + Y L+SN+YA+ G W DVA R ++K SG+KK P
Sbjct: 704 CRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRP 763
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S ++ Q F V + SH +I +L++L
Sbjct: 764 GCSWVQGQKGTASFFVGDRSHPLSPQIYALLESL 797
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 211/480 (43%), Gaps = 63/480 (13%)
Query: 43 VLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPN 99
V+ Y CG A V + ++ V W+ +I H + G A+ +M P+
Sbjct: 102 VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPD 161
Query: 100 EYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG 159
+ + AC + S G H G+ S F+ N+L++MY + G +A +++
Sbjct: 162 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 221
Query: 160 EAFE---PNLVSFNALIAGFVENQQPEKGFEVF-KLMLRQGLLP-----DRFSFAGGLEI 210
E + +++S+N++++ V++ ++F K+ L P D S L
Sbjct: 222 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPA 281
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
C + + +H ++ + FVGN ++ Y+K L+ A K F ++E KD++SW
Sbjct: 282 CGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSW 341
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDH--------------------------------- 297
N +A S ++E +FK M ++
Sbjct: 342 NAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIF 401
Query: 298 -GVRPDDFTFASILAACAGLASVQHGKQIHAHLIR---MRLNQDVG-------VGNALVN 346
G P+ T S+L+ACA L + G +IHA+ ++ + L+ D G V NAL++
Sbjct: 402 SGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALID 461
Query: 347 MYAKCGLISCSYKLFNEML--HRNVVSWNTIIAAHANHRLGGSALKLFEQM--KATGIKP 402
MY+KC + +F+++ RNVV+W +I HA + ALKLF +M + G+ P
Sbjct: 462 MYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAP 521
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF--TCLIDLLGRAGKLLEAE 460
++ T +L AC H ++ G+ + + + +F CLID+ + G + A
Sbjct: 522 NAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESS-AYFVANCLIDMYSKCGDVDTAR 580
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 172/395 (43%), Gaps = 52/395 (13%)
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
+G +++ Y+ G + ALLV V +N LI ++ + + V MLR G
Sbjct: 98 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 157
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
PD F+ L+ C R G H L ESN F+ N ++A+YS+ + EA
Sbjct: 158 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 217
Query: 257 KAFRLIEEK---DLISWNTFIAACSHCADYEKGLSVFKEMS-----NDHGVRPDDFTFAS 308
F I ++ D+ISWN+ ++A ++ L +F +M+ R D + +
Sbjct: 218 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 277
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
IL AC L +V K++H + IR DV VGNAL++ YAKCGL+ + K+FN M ++
Sbjct: 278 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 337
Query: 369 VVSWN-----------------------------------TIIAAHANHRLGGSALKLFE 393
VVSWN +IA ++ AL LF
Sbjct: 338 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 397
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEG-EAYFNSMEKTY--------GISPDIEHFT 444
QM +G P+ VT I +L+AC G +G E + S++ G D+ +
Sbjct: 398 QMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 457
Query: 445 CLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
LID+ + A PL + +V T++
Sbjct: 458 ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVM 492
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPD--VIVSNHVLNLYAKCGKMILARKV 59
A +IS +L C+ A++ G +HA VL+ V+N ++++Y+KCG + AR V
Sbjct: 523 AYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHV 582
Query: 60 FDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
FD MS+++ +SW++M++G+ G AL+ F +M +P++ F + AC+
Sbjct: 583 FDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACS 637
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 193/542 (35%), Positives = 281/542 (51%), Gaps = 76/542 (14%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH 95
++I N ++ Y K +++ AR +FD M ER+ VSW+ MISG+ Q GE L A F +
Sbjct: 203 ELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEE-- 260
Query: 96 LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL 155
S V+ F +++S Y++ G +A
Sbjct: 261 -------------------SPVRD---------------VFTWTAMVSGYVQNGMLDEAR 286
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN 215
V+ E N VS+NA+IAG+V+ ++ ++ E+F+ M Q
Sbjct: 287 RVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQ-------------------- 326
Query: 216 DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIA 275
N NT++ Y++ I +A F + ++D ISW IA
Sbjct: 327 -------------------NVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIA 367
Query: 276 ACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN 335
+ E+ L +F EM D G R + TF S L+ CA +A+++ GKQ+H +++ L
Sbjct: 368 GYAQSGYGEEALHLFVEMKRD-GERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLE 426
Query: 336 QDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM 395
VGNAL+ MY KCG I +Y +F + + VVSWNT+IA +A H G AL LFE M
Sbjct: 427 SGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESM 486
Query: 396 KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGK 455
K TGI PD VT +G+L+AC+H GLV +G YF SM + YGI+ + +H+TC+IDLLGRAG+
Sbjct: 487 KKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGR 546
Query: 456 LLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNL 515
L +A+ K P D G LL A R+ + +GE+ AK +F ++P + YVLLSNL
Sbjct: 547 LDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNL 606
Query: 516 YASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
YA+ G WGDV R ++D G+KK P YS +EVQ FTV + H + I L+ L
Sbjct: 607 YAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEEL 666
Query: 576 SL 577
L
Sbjct: 667 DL 668
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 7/202 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S L C++ AL+ G +H V+K G++ V N +L +Y KCG + A VF+ +
Sbjct: 396 TFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGI 455
Query: 64 SERNLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
E+ +VSW+ MI+G+ + G E L+ E + +LP++ +SAC+ + KG
Sbjct: 456 EEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGT 515
Query: 121 Q-IHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIAGFVE 178
+ ++ + +G + S +I + + G DA L+ FEP+ ++ AL+
Sbjct: 516 EYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRI 575
Query: 179 NQQPEKGFEVFKLMLRQGLLPD 200
+ E G + K++ + PD
Sbjct: 576 HGNTELGEKAAKMIFE--MEPD 595
>gi|225454363|ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial [Vitis vinifera]
Length = 673
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 187/570 (32%), Positives = 305/570 (53%), Gaps = 8/570 (1%)
Query: 13 SKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWS 72
+K L G LHA V+K+G + + N VL++Y KC + K+FDEM +N+VSW+
Sbjct: 84 AKLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNVVSWN 143
Query: 73 AMISGHHQAGEHL----LALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAY 125
+I G + L +F QM L PN + A + + +Q+H +
Sbjct: 144 TLICGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQLHCF 203
Query: 126 SLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKG 185
LK G+ S FVG++L+ Y K G +A + E +LV +N +++ + N K
Sbjct: 204 ILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKA 263
Query: 186 FEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMAL 245
F VFKLM +G+ D F+F + C V G +H L ++ + + V + ++ +
Sbjct: 264 FGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVDM 323
Query: 246 YSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFT 305
YSK I +A KAF + K+++SW T I D ++ + + +EM + PD+
Sbjct: 324 YSKNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMRLLQEMIRVY-TYPDELA 382
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
ASIL++C L++ Q+HA+++ + + NALV+ Y+KCG I +++ F+ +
Sbjct: 383 LASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVA 442
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
+++SW +++ A+A H L +++FE+M + ++PD V F+G+L+AC H G V EG
Sbjct: 443 EPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAHGGFVLEGLH 502
Query: 426 YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLR 485
YFN M Y I PD EH+TC+IDLLGRAG L EA P+ LG L AC++
Sbjct: 503 YFNLMINVYQIMPDSEHYTCIIDLLGRAGFLDEAINLLTSMPVEPRSDTLGAFLGACKVH 562
Query: 486 RDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSM 545
R+V + +++LF ++P + Y L+SN+YAS G W DVA RK++++ K P S
Sbjct: 563 RNVGLARWASEKLFVMEPNEPANYSLMSNMYASVGHWFDVARVRKLMRERCDFKVPGCSW 622
Query: 546 IEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+E+ G F + +H + ++ ML L
Sbjct: 623 MEIAGEVHTFVSRDKTHPRAVQVYGMLDLL 652
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 118/212 (55%), Gaps = 3/212 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+++ C + G +H ++++ DV+V++ ++++Y+K + ARK FD M
Sbjct: 281 TFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGM 340
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+N+VSW+ MI G+ Q G+ A+ +M + P+E AS +S+C + + +
Sbjct: 341 IVKNIVSWTTMIVGYGQHGDGKEAMRLLQEMIRVYTYPDELALASILSSCGNLSATSEVV 400
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HAY ++ G+ + + N+L+S Y K G A + EP+++S+ +L+ + +
Sbjct: 401 QVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHG 460
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
++G EVF+ ML + PD+ +F G L C+
Sbjct: 461 LSKEGVEVFEKMLFSNVRPDKVAFLGVLSACA 492
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 187/576 (32%), Positives = 307/576 (53%), Gaps = 34/576 (5%)
Query: 34 QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQ 93
+P + N +L YAK + A + F++M+ER++VSW+ MI+ Q+G AL +
Sbjct: 191 RPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVE 250
Query: 94 MH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGY 150
MH + + + S+++ACA + SL G+Q+HA ++ +V ++LI +Y K G
Sbjct: 251 MHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGS 310
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
+A V+ + N VS+ LI G ++ + K E+F M + + D+F+ A +
Sbjct: 311 FKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISG 370
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
C DL G LH L +K V N++++LY+K + AE F + E+D++SW
Sbjct: 371 CFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSW 430
Query: 271 NTFIAACSHCADY-------------------------------EKGLSVFKEMSNDHGV 299
+ I A S + E GL ++ M + V
Sbjct: 431 TSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDV 490
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
PD T+ ++ CA + + + G QI H ++ L +V V NA + MY+KCG IS + K
Sbjct: 491 TPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQK 550
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
LF+ + ++VVSWN +I ++ H +G A K F+ M + G KPD ++++ +L+ C+H+GL
Sbjct: 551 LFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGL 610
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V+EG+ YF+ M + +GISP +EHF+C++DLLGRAG L EA++ K P+ V G LL
Sbjct: 611 VQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALL 670
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
SAC++ + + E AK +F L + Y+LL+ +Y+ G D A RK+++D G+KK
Sbjct: 671 SACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKK 730
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P YS +EV+ F + SH ++ I + L
Sbjct: 731 NPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDEL 766
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 219/459 (47%), Gaps = 49/459 (10%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ + +S L C++ +L G LHA V++ Q D V++ ++ LYAKCG A++VF+
Sbjct: 260 STTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFN 319
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
+ +RN VSW+ +I G Q ++E F+QM + +++ A+ IS C L
Sbjct: 320 SLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCL 379
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVS---------- 168
G+Q+H+ LK G+ V NSLIS+Y K G +A V+ E ++VS
Sbjct: 380 GRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQ 439
Query: 169 ---------------------FNALIAGFVENQQPEKGFEVFKLMLRQ-GLLPDRFSFAG 206
+NA++ ++++ E G +++ ML Q + PD ++
Sbjct: 440 IGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVT 499
Query: 207 GLEICSV--SNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE 264
C+ +N L +I H TVK L N V N + +YSK I EA+K F L+
Sbjct: 500 LFRGCADIGANKLGDQIIGH--TVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNG 557
Query: 265 KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ 324
KD++SWN I S ++ F +M + G +PD ++ ++L+ C+ VQ GK
Sbjct: 558 KDVVSWNAMITGYSQHGMGKQAAKTFDDMLS-KGAKPDYISYVAVLSGCSHSGLVQEGKL 616
Query: 325 IHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS-WNTIIAA---H 379
+ R+ ++ + + +V++ + G ++ + L ++M + W +++A H
Sbjct: 617 YFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIH 676
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
N L A K ++ + PDS +++ L + AG
Sbjct: 677 GNDELAELAAKHVFELDS----PDSGSYMLLAKIYSDAG 711
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 116/555 (20%), Positives = 239/555 (43%), Gaps = 80/555 (14%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
+ ++++ L C AL +LH ++ +G+ V + N +L+ Y CG + AR++
Sbjct: 19 VTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLL 78
Query: 61 D-EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---------HLLPNEYIFASAISAC 110
++ E N+++ + M++G+ + G A E F +M L+ + A + +C
Sbjct: 79 RADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSC 138
Query: 111 AGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFN 170
+ Q+ KF + V +L+ M+++ GY A ++ + P + N
Sbjct: 139 GALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRN 198
Query: 171 ALIAGFVENQQPEKGFEVFKLML-------------------------------RQGLLP 199
+++AG+ + + E F+ M R+G+
Sbjct: 199 SMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRL 258
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
D ++ L C+ L G LH ++ + +P+V + ++ LY+K EA++ F
Sbjct: 259 DSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVF 318
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+++++ +SW I + K + +F +M + + D F A++++ C +
Sbjct: 319 NSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAEL-MAIDQFALATLISGCFNRMDL 377
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
G+Q+H+ ++ N+ + V N+L+++YAKCG + + +F+ M R++VSW ++I A+
Sbjct: 378 CLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAY 437
Query: 380 A-----------------------NHRLGG--------SALKLFEQM-KATGIKPDSVTF 407
+ N LG LK++ M + PD VT+
Sbjct: 438 SQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTY 497
Query: 408 IGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+ L C G K G+ K G+ ++ I + + G++ EA+ K F
Sbjct: 498 VTLFRGCADIGANKLGDQIIGHTVKA-GLILNVSVANAAITMYSKCGRISEAQ---KLFD 553
Query: 468 L--GQDPIVLGTLLS 480
L G+D + +++
Sbjct: 554 LLNGKDVVSWNAMIT 568
>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 183/559 (32%), Positives = 302/559 (54%), Gaps = 6/559 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+ SLL + + + +H +K+G+ V N +++ Y KCG + +VF+E
Sbjct: 114 SVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNET 173
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
E+N VSW+++I+G G AL F M PN +S + ++ G+
Sbjct: 174 VEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGK 233
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+IH +S++ G + F+ NSLI MY K G+S++A ++ N+VS+NA+IA + N+
Sbjct: 234 EIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNR 293
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
P + M G P+ +F L C+ L G +H + V+ L S+ FV N
Sbjct: 294 LPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSN 353
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +Y+K + A F KD +S+N I S D + L++F EM G +
Sbjct: 354 SLIDMYAKCGCLHSARNVFN-TSRKDEVSYNILIIGYSETDDCLQSLNLFSEM-RLLGKK 411
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD +F +++ACA LA+++ GK++H +R L + V N+L++ Y KCG I + +L
Sbjct: 412 PDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRL 471
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN++L ++V SWNT+I + +A+ +FE M+ ++ D V++I +L+AC+H GLV
Sbjct: 472 FNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLV 531
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+ G YF+ M + P H+TC++DLLGRAG + EA + ++ P+ D + G LL
Sbjct: 532 ERGWQYFSEMLAQR-LEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLG 590
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ +V +G R A+ LF L+P Y+LLSN+YA G W + R+++K G KK
Sbjct: 591 ACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKN 650
Query: 541 PSYSMIEVQGTFEKFTVAE 559
P S +++ F E
Sbjct: 651 PGCSWVQIYDQVHAFVAEE 669
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 126/421 (29%), Positives = 221/421 (52%), Gaps = 6/421 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L CS + + +G+ +H V K+G DV V N +L LY CG + AR++FDEM ER+
Sbjct: 16 VLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERD 75
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISACAGIQSLVKGQQIH 123
+VSW+ +I G++ A ++ M L PN S + A ++ ++IH
Sbjct: 76 VVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIH 135
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
YS+K G S N+L+ Y K G V+ E E N VS+N++I G +
Sbjct: 136 CYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCW 195
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
F++M+ G P+ + + L + + G +H +++ E++ F+ N+++
Sbjct: 196 DALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLI 255
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K EA F ++ ++++SWN IA + + + +M + G P+
Sbjct: 256 DMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQ-ETGECPNA 314
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
TF ++L ACA L + GK+IHA +R+ L D+ V N+L++MYAKCG + + +FN
Sbjct: 315 VTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNT 374
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
++ VS+N +I ++ +L LF +M+ G KPD V+F+G+++AC + +K+G
Sbjct: 375 S-RKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQG 433
Query: 424 E 424
+
Sbjct: 434 K 434
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 185/366 (50%), Gaps = 9/366 (2%)
Query: 99 NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY 158
+++ F + C+ + KG ++H K G+ + +VGN+L+ +Y G+ +DA ++
Sbjct: 9 DDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLF 68
Query: 159 GEAFEPNLVSFNALIAGF-VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDL 217
E E ++VS+N +I V E F ++LR + P+ S L I + D
Sbjct: 69 DEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDE 128
Query: 218 RKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIA-- 275
+HC +VK L+S N ++ Y K + + F EK+ +SWN+ I
Sbjct: 129 EMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGL 188
Query: 276 ACS-HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRL 334
AC C D L+ F+ M D G +P+ T +SIL L + GK+IH +RM
Sbjct: 189 ACKGRCWD---ALNAFRMMI-DAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGT 244
Query: 335 NQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQ 394
D+ + N+L++MYAK G + + +F+ + RN+VSWN +IA +A +RL A++ Q
Sbjct: 245 ETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQ 304
Query: 395 MKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
M+ TG P++VTF +L AC G + G+ ++M G++ D+ LID+ + G
Sbjct: 305 MQETGECPNAVTFTNVLPACARLGFLGPGKE-IHAMGVRIGLTSDLFVSNSLIDMYAKCG 363
Query: 455 KLLEAE 460
L A
Sbjct: 364 CLHSAR 369
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 137/268 (51%), Gaps = 1/268 (0%)
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
M+R+G+ D +F L++CS S D+ KGM +H + K +++ +VGNT++ LY
Sbjct: 1 MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ +A + F + E+D++SWNT I S DY + + + M ++P+ + S+L
Sbjct: 61 LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP 120
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
A L + ++IH + +++ L+ V NALV+ Y KCG + +++FNE + +N VS
Sbjct: 121 ISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVS 180
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
WN+II A AL F M G +P+SVT +L K G+ +
Sbjct: 181 WNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKE-IHGFS 239
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEA 459
G DI LID+ ++G EA
Sbjct: 240 MRMGTETDIFIANSLIDMYAKSGHSTEA 267
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 183/402 (45%), Gaps = 57/402 (14%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +++L C++ L G +HA +++G+ D+ VSN ++++YAKCG + AR VF+
Sbjct: 314 AVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN 373
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVK 118
S ++ VS++ +I G+ + + L +L FS+M LL P+ F ISACA + +L +
Sbjct: 374 -TSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQ 432
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+++H +L+ S FV NSL+ Y K G A ++ + ++ S+N +I G+
Sbjct: 433 GKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGM 492
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ E +F+ M + D S+ L CS + +G + +LE
Sbjct: 493 IGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQRLEP---- 548
Query: 239 GNTIMALYSKFNLIGEA---EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
T M +L+G A E+A +LI++
Sbjct: 549 --TEMHYTCMVDLLGRAGFVEEAAKLIQQLP----------------------------- 577
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
+ PD + ++L AC +V+ G++ HL ++ Q G L N+YA+ G
Sbjct: 578 ---IAPDANIWGALLGACRIYGNVELGRRAAEHLFELK-PQHCGYYILLSNIYAETGRWD 633
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA 397
+ K+ M R A G S +++++Q+ A
Sbjct: 634 EANKIRELMKSRG-----------AKKNPGCSWVQIYDQVHA 664
>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
Length = 848
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 186/578 (32%), Positives = 322/578 (55%), Gaps = 4/578 (0%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
++ S +S L C + + + G+ +H ++K+G + D V +L +Y+KC + A VF
Sbjct: 255 VSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVF 314
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLV 117
D++S + W+AMIS + G L+ + QM +L P+ + +S+C + S
Sbjct: 315 DQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYD 374
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+ IHA +K S + ++L++MY K G S DA ++ ++V++ ++I+GF
Sbjct: 375 FGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFC 434
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+N++ + E + M G PD A + C+ ++ G +H L +K LE + F
Sbjct: 435 QNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVF 494
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V ++++ +YSKFN + F + K+L++WN+ I+ + +S+F +M+ +
Sbjct: 495 VASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQ-Y 553
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G+ PD + S+L + + +A ++ GK +H +LIR R+ D+ + NAL++MY KCG + +
Sbjct: 554 GLFPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQLENALIDMYIKCGFLKYA 613
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+F ML N+V+WN +IA +H A+ LF++M++ GI PD +TFI LLT+CNH
Sbjct: 614 QHIFQNMLQTNLVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGIAPDDITFISLLTSCNHC 673
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
G ++EG F M +GI P +EH+ ++DLLGRAG+L +A + K P+ D + +
Sbjct: 674 GFIEEGLKLFQLMTVEHGIEPRMEHYVNIVDLLGRAGRLDDAYAFVKNLPIEPDRSIWLS 733
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL +CR+ +V +G+ A +L ++P+ S YV L NLY + + A R +K+ GL
Sbjct: 734 LLCSCRVHHNVELGKLAAHKLLDIEPSRGSNYVQLLNLYGENELQDRAANLRASMKEKGL 793
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KK P S IEV + + F + S + EI +L +L
Sbjct: 794 KKTPGCSWIEVGNSIDVFFSGDSSSPRTIEIYDLLNSL 831
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 224/456 (49%), Gaps = 14/456 (3%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGI-QPDVIVSNHVLNLYAKCGKMILARKVFD---- 61
SLL C LQ G ++H+ ++ G D ++ ++N Y KCG A KVFD
Sbjct: 54 SLLKACGFLSNLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGNAVKVFDKLPE 113
Query: 62 -EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLV 117
E+S +++ W+++++G+ + G + F +M L P+ Y + A G L
Sbjct: 114 SEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILLGASDG--HLG 171
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEP-NLVSFNALIAGF 176
+QIH YS++ + F+ + LI MY G DA ++ E + N+V++N +I GF
Sbjct: 172 YAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGF 231
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
EN E EV+ L + + SF L C + GM +HC VK E++P
Sbjct: 232 GENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDP 291
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
+V +++ +YSK L+ +AE F + K WN I+A GL ++K+M
Sbjct: 292 YVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVL 351
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
+ PD T ++L++C + S G+ IHA L++ + +V + +AL+ MY+KCG
Sbjct: 352 Q-IPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDD 410
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ +FN + R+VV+W ++I+ +R AL+ + M G KPDS +++AC
Sbjct: 411 ANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTG 470
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
V G + + G+ D+ + L+D+ +
Sbjct: 471 LKNVNLG-CTIHGLAIKSGLEQDVFVASSLVDMYSK 505
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 201/415 (48%), Gaps = 13/415 (3%)
Query: 80 QAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGY-ASISFVG 138
Q G+++ AL+F+S+ L + + S + AC + +L G+ IH+ + G+ S ++
Sbjct: 29 QQGQYVDALQFYSRNPLNATRFTYPSLLKACGFLSNLQYGKTIHSTIITKGFFYSDPYIT 88
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEP-----NLVSFNALIAGFVENQQPEKGFEVFKLML 193
SLI+ Y K G +A+ V+ + E ++ +N+++ G+ ++G F M
Sbjct: 89 TSLINFYFKCGSFGNAVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQ 148
Query: 194 RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
G+ PD +S + + + L +H +V+ +PF+ + ++ +Y
Sbjct: 149 LFGVRPDAYSLC--ILLGASDGHLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPL 206
Query: 254 EAEKAFRLIEEK-DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
+A + F+ +E+K ++++WN I +E L V+ N++ V+ +F S L+A
Sbjct: 207 DAWRLFKELEDKGNVVAWNVMIGGFGENGLWENSLEVYLLAKNEN-VKLVSASFTSTLSA 265
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
C V G Q+H L+++ D V +L+ MY+KC L+ + +F+++ + W
Sbjct: 266 CCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELW 325
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
N +I+A+ + LK+++QMK I PDS+T +L++C G G + K
Sbjct: 326 NAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVK 385
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA-CRLRR 486
I ++ + L+ + + G +A G+D + G+++S C+ R+
Sbjct: 386 R-PIQSNVALQSALLTMYSKCGNSDDANSIFNTIK-GRDVVAWGSMISGFCQNRK 438
>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
Length = 749
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 189/574 (32%), Positives = 313/574 (54%), Gaps = 40/574 (6%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
SSL+ C K++ + + LK G + N +++ Y KCG ++ ARKVFDE+
Sbjct: 82 SSLIQQCIGIKSITDITKIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVPH 139
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQI 122
R++V+W++MI+ + + G A++ + +M +LP+E+ F+S A + + + +GQ+
Sbjct: 140 RHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRA 199
Query: 123 HAYSLKFGYA-SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
H S+ G S FVG++L+ MY K G DA LV + ++V F ALI G+ + +
Sbjct: 200 HGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGE 259
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ +VF+ M ++G+ + ++ + L C DL G ++H L VK LES
Sbjct: 260 DGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLES------- 312
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++W + I E L F++M + P
Sbjct: 313 -------------------------AVTWTSVIVGLVQNGREEIALLKFRQMLRS-SITP 346
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
+ FT +S+L AC+ LA ++ GKQIHA +++ L+ D VG AL++ Y KCG + +F
Sbjct: 347 NSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVF 406
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
N +L +VVS N++I ++A + G AL+LF MK TG++P++VT++G+L+ACN+AGL++
Sbjct: 407 NGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLE 466
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
EG F+S + I +H+ C++DLLGRAG+L EAE + + D ++ TLLSA
Sbjct: 467 EGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNI-SDVVIWRTLLSA 525
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
CR+ DV + +R+ ++ L P +VLLSNLYAS G W V + +++ LKK P
Sbjct: 526 CRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNP 585
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ S ++V+ F ++SH +I L+ L
Sbjct: 586 AMSWVDVEREIHTFMAGDWSHPNFRDIREKLEEL 619
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 66/122 (54%), Gaps = 3/122 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+L CS L+QG +HA V+K G+ D V +++ Y KCG +AR VF+ +
Sbjct: 350 TLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGL 409
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
E ++VS ++MI + Q G AL+ FS M L PN + +SAC L +G
Sbjct: 410 LEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGC 469
Query: 121 QI 122
I
Sbjct: 470 HI 471
>gi|413948598|gb|AFW81247.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 788
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 181/525 (34%), Positives = 292/525 (55%), Gaps = 9/525 (1%)
Query: 35 PDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM 94
P V VS + + YAK G++ LA +V DEM RN+VSW+ +++ +AG AL F++M
Sbjct: 87 PSVFVSTALADAYAKAGRLDLALQVLDEMPSRNVVSWTTLVASLARAGRRHDALRRFAEM 146
Query: 95 H---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
+ + + ++A++ACA L +G+++HA K G ++ FV N+L ++Y + G
Sbjct: 147 RASGVACDSHACSAALTACADAGLLPRGREVHALCAKLGLDAVPFVANALAALYARCGDV 206
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ----GLLPDRFSFAGG 207
AL G ++ LIA +V+ + E+ E F MLR P+ ++F+
Sbjct: 207 DRALAAVGRMGSHDVAVCTTLIASYVQTGRTEEAIEAFVRMLRDESSNSASPNEYTFSAV 266
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDL 267
+ C + G LH + L V N+++ LYS+ + A+ FR KD+
Sbjct: 267 IAACPNMDRAYLGEQLHAQAARRGLSHARSVANSLVKLYSRRGHLSAADAIFRESVVKDV 326
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEMSNDHGV-RPDDFTFASILAACAGLASVQHGKQIH 326
+SW+T I+ + E+ ++F EM + RP++FT AS+ + CA AS+ G+Q+H
Sbjct: 327 VSWSTIISGYTQEGLAEESFALFSEMRHHSSCPRPNEFTLASLFSVCASAASLDTGRQLH 386
Query: 327 AHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGG 386
A + L V +ALVNMY K G +S + +F+ +V+SW +I HA H
Sbjct: 387 ALAVAAGLEHHAMVRSALVNMYGKGGSMSDANVVFSNRTKDDVISWTAMIVGHAEHGHSK 446
Query: 387 SALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCL 446
A +LFE+M G+KPD VTFIG+LTAC+HAG ++ G Y N+M K+YG+ P+ EH+ C+
Sbjct: 447 EAFELFEEMCRIGLKPDHVTFIGVLTACSHAGELELGLRYLNAMNKSYGLEPEKEHYGCV 506
Query: 447 IDLLGRAGKLLEAEEYTKKFPLGQ-DPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTT 505
+DLL RAG++ EAEE + + D +V +LL AC R G+ A+++ +P
Sbjct: 507 VDLLARAGRIHEAEELIGRIAAEERDGVVWTSLLRACAARGAEETGKIAAERMMEAEPWG 566
Query: 506 TSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQG 550
+ +V+++NLYAS G+W + A R ++K G+ K +S +EV G
Sbjct: 567 SGAHVVMANLYASKGLWCEAAQERHLMKQKGVLKGAGWSSVEVGG 611
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 185/387 (47%), Gaps = 13/387 (3%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S+ L C+ L +G +HA K+G+ V+N + LYA+CG + A M
Sbjct: 159 SAALTACADAGLLPRGREVHALCAKLGLDAVPFVANALAALYARCGDVDRALAAVGRMGS 218
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM-------HLLPNEYIFASAISACAGIQSLVK 118
++ + +I+ + Q G A+E F +M PNEY F++ I+AC +
Sbjct: 219 HDVAVCTTLIASYVQTGRTEEAIEAFVRMLRDESSNSASPNEYTFSAVIAACPNMDRAYL 278
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+Q+HA + + G + V NSL+ +Y + G+ S A ++ E+ ++VS++ +I+G+ +
Sbjct: 279 GEQLHAQAARRGLSHARSVANSLVKLYSRRGHLSAADAIFRESVVKDVVSWSTIISGYTQ 338
Query: 179 NQQPEKGFEVFKLMLRQGLL--PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
E+ F +F M P+ F+ A +C+ + L G LH L V LE +
Sbjct: 339 EGLAEESFALFSEMRHHSSCPRPNEFTLASLFSVCASAASLDTGRQLHALAVAAGLEHHA 398
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
V + ++ +Y K + +A F + D+ISW I + ++ +F+EM
Sbjct: 399 MVRSALVNMYGKGGSMSDANVVFSNRTKDDVISWTAMIVGHAEHGHSKEAFELFEEMCRI 458
Query: 297 HGVRPDDFTFASILAACAGLASVQHG-KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
G++PD TF +L AC+ ++ G + ++A L + +V++ A+ G I
Sbjct: 459 -GLKPDHVTFIGVLTACSHAGELELGLRYLNAMNKSYGLEPEKEHYGCVVDLLARAGRIH 517
Query: 356 CSYKLFNEML--HRNVVSWNTIIAAHA 380
+ +L + R+ V W +++ A A
Sbjct: 518 EAEELIGRIAAEERDGVVWTSLLRACA 544
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 149/291 (51%), Gaps = 8/291 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S+++ C G LHA + G+ V+N ++ LY++ G + A +F E
Sbjct: 262 TFSAVIAACPNMDRAYLGEQLHAQAARRGLSHARSVANSLVKLYSRRGHLSAADAIFRES 321
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH-----LLPNEYIFASAISACAGIQSLVK 118
+++VSWS +ISG+ Q G + FS+M PNE+ AS S CA SL
Sbjct: 322 VVKDVVSWSTIISGYTQEGLAEESFALFSEMRHHSSCPRPNEFTLASLFSVCASAASLDT 381
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+Q+HA ++ G + V ++L++MY K G SDA +V+ + +++S+ A+I G E
Sbjct: 382 GRQLHALAVAAGLEHHAMVRSALVNMYGKGGSMSDANVVFSNRTKDDVISWTAMIVGHAE 441
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPF 237
+ ++ FE+F+ M R GL PD +F G L CS + +L G+ L+ + LE
Sbjct: 442 HGHSKEAFELFEEMCRIGLKPDHVTFIGVLTACSHAGELELGLRYLNAMNKSYGLEPEKE 501
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLI--EEKDLISWNTFIAACSHCADYEKG 286
++ L ++ I EAE+ I EE+D + W + + AC+ E G
Sbjct: 502 HYGCVVDLLARAGRIHEAEELIGRIAAEERDGVVWTSLLRACAARGAEETG 552
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 189/422 (44%), Gaps = 30/422 (7%)
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFF-------SQMHLLPNEYIFASAI-------- 107
M R+ V+++ ++SG+ A + A+ F SQ H + +I + +
Sbjct: 1 MPRRDEVAYATLLSGYAAAADFPGAMALFSRFRASSSQPHDAADPFILSPVLKACASAAA 60
Query: 108 -SACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNL 166
+ + +HA++++ FV +L Y K G AL V E N+
Sbjct: 61 SAGLLPLPHAAAAAALHAFAVRSSSLPSVFVSTALADAYAKAGRLDLALQVLDEMPSRNV 120
Query: 167 VSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCL 226
VS+ L+A + F M G+ D + + L C+ + L +G +H L
Sbjct: 121 VSWTTLVASLARAGRRHDALRRFAEMRASGVACDSHACSAALTACADAGLLPRGREVHAL 180
Query: 227 TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKG 286
K L++ PFV N + ALY++ + A A + D+ T IA+ E+
Sbjct: 181 CAKLGLDAVPFVANALAALYARCGDVDRALAAVGRMGSHDVAVCTTLIASYVQTGRTEEA 240
Query: 287 LSVFKEMSND---HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA 343
+ F M D + P+++TF++++AAC + G+Q+HA R L+ V N+
Sbjct: 241 IEAFVRMLRDESSNSASPNEYTFSAVIAACPNMDRAYLGEQLHAQAARRGLSHARSVANS 300
Query: 344 LVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK--ATGIK 401
LV +Y++ G +S + +F E + ++VVSW+TII+ + L + LF +M+ ++ +
Sbjct: 301 LVKLYSRRGHLSAADAIFRESVVKDVVSWSTIISGYTQEGLAEESFALFSEMRHHSSCPR 360
Query: 402 PDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF----TCLIDLLGRAGKLL 457
P+ T L + C A + G ++ +EH + L+++ G+ G +
Sbjct: 361 PNEFTLASLFSVCASAASLDTGRQL-----HALAVAAGLEHHAMVRSALVNMYGKGGSMS 415
Query: 458 EA 459
+A
Sbjct: 416 DA 417
>gi|297738941|emb|CBI28186.3| unnamed protein product [Vitis vinifera]
Length = 760
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 194/583 (33%), Positives = 321/583 (55%), Gaps = 33/583 (5%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +++L CS + G LH+ +LK G+ +V V N ++ +Y++C +++ AR+
Sbjct: 176 AVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARR--- 232
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQ 121
G+ L+ LE + L + F AISAC + G+Q
Sbjct: 233 ---------------GNSGLEAILVFLEMLKEGMKL-DHVSFTGAISACGHGKEFELGRQ 276
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
IH+ ++K GY + V N LIS Y K DA LV+ + N+VS+ +I+
Sbjct: 277 IHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMIS-----IS 331
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
E +F M R G+ P+ +F G + ++ N + +G ++H + VK S V N+
Sbjct: 332 EEDATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNS 391
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y+KF + ++ K F + +++ISWN+ I+ + +++ L F +S RP
Sbjct: 392 LITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTF--LSALMESRP 449
Query: 302 DDFTFASILA--ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
++FTF S+L+ A A S++HG++ H+H++++ LN + V +AL++MYAK G I S
Sbjct: 450 NEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICESLG 509
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F+E +N V+W II+AHA H + + LF+ M+ G+KPDS+TF+ ++TAC G+
Sbjct: 510 VFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGRKGM 569
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V G FNSM K + I P EH++ ++D+LGRAG+L EAEE+ + P G VL +LL
Sbjct: 570 VDTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQIPGGAGLSVLQSLL 629
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
ACR+ +V + +R+A L ++P + YVL+SNLYA G W VA RK +++ G++K
Sbjct: 630 GACRIHGNVDMAKRVADDLIEMEPMGSGSYVLMSNLYAEKGEWEKVAKIRKGMRERGVRK 689
Query: 540 EPSYSMIEVQGTFEKFTVAEFS-----HSKIGEINYMLKTLSL 577
E +S ++V + FS H + EI M +TL L
Sbjct: 690 EIGFSWVDVGDADGSLYLHGFSSDDKFHPQSEEIYRMAETLGL 732
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 226/469 (48%), Gaps = 45/469 (9%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G +HA + G V V N ++N+Y K G A VF+ ++ ++VSW+ ++SG +
Sbjct: 97 GCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQR 156
Query: 81 AGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
+ + AL F +M+ + + ++ C+ + + G Q+H+ LK G FV
Sbjct: 157 SDD---ALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFV 213
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE---VFKLMLR 194
GN+LI+MY + VE ++ G E VF ML+
Sbjct: 214 GNALITMYSRC-------------------------CRLVEARRGNSGLEAILVFLEMLK 248
Query: 195 QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGE 254
+G+ D SF G + C + G +H L VK +++ V N +++ YSK I +
Sbjct: 249 EGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIED 308
Query: 255 AEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA 314
A+ F I +++++SW T I+ E S+F EM D GV P+D TF ++ A
Sbjct: 309 AKLVFESIIDRNVVSWTTMISISE-----EDATSLFNEMRRD-GVYPNDVTFVGLIHAIT 362
Query: 315 GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNT 374
V+ G+ IH ++ ++ V N+L+ MYAK +S S K+F E+ +R ++SWN+
Sbjct: 363 MKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNS 422
Query: 375 IIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV--KEGEAYFNSMEK 432
+I+ +A + L AL+ F +P+ TF +L++ A + + G+ + + K
Sbjct: 423 LISGYAQNGLWQEALQTFLSALMES-RPNEFTFGSVLSSIASAEAISMRHGQRCHSHILK 481
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
G++ + + L+D+ + G + E+ + PL ++ + ++SA
Sbjct: 482 -LGLNTNPIVSSALLDMYAKRGSICESLGVFSETPL-KNEVAWTAIISA 528
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 158/326 (48%), Gaps = 33/326 (10%)
Query: 99 NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY 158
++ A + AC G L G QIHA+++ G+ S V NSL++MY K G AL+V+
Sbjct: 79 DQVTVAIVLKACCGDSKL--GCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVF 136
Query: 159 GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLR 218
P++VS+N +++GF Q+ + M G+ D + L CS
Sbjct: 137 ENLNNPDIVSWNTVLSGF---QRSDDALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFI 193
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
G LH +KC L+ FVGN ++ +YS+ + EA + +E
Sbjct: 194 FGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRGNSGLE--------------- 238
Query: 279 HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
+ VF EM + G++ D +F ++AC + G+QIH+ +++ + V
Sbjct: 239 -------AILVFLEMLKE-GMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHV 290
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
V N L++ Y+KC I + +F ++ RNVVSW T+I+ A LF +M+
Sbjct: 291 KVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISISEE-----DATSLFNEMRRD 345
Query: 399 GIKPDSVTFIGLLTACNHAGLVKEGE 424
G+ P+ VTF+GL+ A LV+EG+
Sbjct: 346 GVYPNDVTFVGLIHAITMKNLVEEGQ 371
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 105/236 (44%), Gaps = 30/236 (12%)
Query: 184 KGFEVFKLMLRQGLLP--DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ ++FK L+ G + D+ + A L+ C D + G +H + S+ V N+
Sbjct: 61 EALDLFKKQLQWGFVGNIDQVTVAIVLKACC--GDSKLGCQIHAFAISSGFISHVTVPNS 118
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+M +Y K L A F + D++SWNT ++ D F N GV
Sbjct: 119 LMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQRSDDALN----FALRMNFTGVAF 174
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D T ++LA C+ G Q+H+ +++ L+ +V VGNAL+ MY++C +
Sbjct: 175 DAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRL------- 227
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+ A N G A+ +F +M G+K D V+F G ++AC H
Sbjct: 228 -------------VEARRGNS--GLEAILVFLEMLKEGMKLDHVSFTGAISACGHG 268
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 76/163 (46%), Gaps = 12/163 (7%)
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D T A +L AC G + + G QIHA I V V N+L+NMY K GL + +F
Sbjct: 79 DQVTVAIVLKACCGDSKL--GCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVF 136
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC-NHAGLV 420
+ + ++VSWNT+++ + AL +M TG+ D+VT +L C +H G +
Sbjct: 137 ENLNNPDIVSWNTVLSG---FQRSDDALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFI 193
Query: 421 KEGEAYFNSMEKTYGISPDIEHF--TCLIDLLGRAGKLLEAEE 461
F + D E F LI + R +L+EA
Sbjct: 194 ----FGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARR 232
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 187/543 (34%), Positives = 296/543 (54%), Gaps = 32/543 (5%)
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQI 122
R+ SW + ++ + A+ + +M + P+ + F + + A +G+Q L G+QI
Sbjct: 55 RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114
Query: 123 HAYSLKFGYASIS---------------------FVGNSLISMYMKVGYSSDALLVYGEA 161
HA ++KFGY S S F N+L++MY K+G D+ ++
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESF 174
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
+ ++VS+N +I+ F ++ + + F+LM+ +G+ D + A L CS L G
Sbjct: 175 VDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGK 234
Query: 222 ILHCLTVKCK-LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHC 280
+H ++ L N FVG+ ++ +Y + + F I + + WN I+ +
Sbjct: 235 EIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARN 294
Query: 281 ADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA-GLASVQHGKQIHAHLIRMRLNQDVG 339
EK L +F EM G+ P+ T AS++ AC LA++ GK+IHA+ IR L D+
Sbjct: 295 GLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDIT 354
Query: 340 VGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG 399
VG+ALV+MYAKCG ++ S ++FNEM ++NV++WN +I A H G AL+LF+ M A
Sbjct: 355 VGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEA 414
Query: 400 -----IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
KP+ VTFI + AC+H+GL+ EG F M+ +G+ P +H+ C++DLLGRAG
Sbjct: 415 GRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAG 474
Query: 455 KLLEAEEYTKKFPLGQDPI-VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLS 513
+L EA E P D + +LL ACR+ ++V +GE AK L HL+P S YVLLS
Sbjct: 475 QLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLS 534
Query: 514 NLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLK 573
N+Y+S G+W RK ++ G+KKEP S IE + KF + SH + +++ L+
Sbjct: 535 NIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLE 594
Query: 574 TLS 576
TLS
Sbjct: 595 TLS 597
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 202/429 (47%), Gaps = 47/429 (10%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGI-QPDVIVSNHVLNLYAKCG----------- 51
+ ++L S + L+ G +HAA +K G V V+N ++N+Y KCG
Sbjct: 94 AFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNA 153
Query: 52 ---------KMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNE-- 100
++ ++ +F+ +R++VSW+ MIS Q+ AL FF M L E
Sbjct: 154 LMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELD 213
Query: 101 -YIFASAISACAGIQSLVKGQQIHAYSLKFG-YASISFVGNSLISMYMKVGYSSDALLVY 158
AS + AC+ ++ L G++IHAY L+ SFVG++L+ MY V+
Sbjct: 214 GVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVF 273
Query: 159 GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR-QGLLPDRFSFAGGLEICSVS-ND 216
+ +NA+I+G+ N EK +F M++ GLLP+ + A + C S
Sbjct: 274 DHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAA 333
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
+ KG +H ++ L S+ VG+ ++ +Y+K + + + F + K++I+WN I A
Sbjct: 334 IAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMA 393
Query: 277 CSHCADYEKGLSVFKEMSNDHG----VRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
C E+ L +FK M + G +P++ TF ++ AAC+ + G +
Sbjct: 394 CGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLF-----Y 448
Query: 333 RLNQDVGVGNA------LVNMYAKCGLISCSYKLFNEMLHR--NVVSWNTIIAA---HAN 381
R+ D GV +V++ + G + +Y+L N M V +W++++ A H N
Sbjct: 449 RMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQN 508
Query: 382 HRLGGSALK 390
LG A K
Sbjct: 509 VELGEVAAK 517
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 198/424 (46%), Gaps = 53/424 (12%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+I+S+L CS + L G +HA VL+ + + V + ++++Y C ++ R+VFD
Sbjct: 216 TIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDH 275
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACA-GIQSLV 117
+ R + W+AMISG+ + G AL F +M LLPN AS + AC + ++
Sbjct: 276 ILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIA 335
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
KG++IHAY+++ AS VG++L+ MY K G + + V+ E N++++N LI
Sbjct: 336 KGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACG 395
Query: 178 ENQQPEKGFEVFKLMLRQG-----LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
+ + E+ E+FK M+ + P+ +F CS S G+I L + ++
Sbjct: 396 MHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHS-----GLISEGLNLFYRM 450
Query: 233 ESNPFVGNTIMALYSKFNLIGEA---EKAFRLIE----EKDLI-SWNTFIAACSHCADYE 284
+ + V T +L+G A E+A+ L+ E D + +W++ + AC + E
Sbjct: 451 KHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVE 510
Query: 285 KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNAL 344
G K + + + S + + AGL + ++ ++ +M + ++ G
Sbjct: 511 LGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWN--KAMEVRKNMRQMGVKKEPG----- 563
Query: 345 VNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH----RLGGSALKLFEQMKATGI 400
CS+ F + +H+ +A +H +L G L E+M+ G
Sbjct: 564 -----------CSWIEFRDEVHK-------FMAGDVSHPQSEQLHGFLETLSEKMRKEGY 605
Query: 401 KPDS 404
PD+
Sbjct: 606 VPDT 609
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 183/584 (31%), Positives = 319/584 (54%), Gaps = 15/584 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L C++ + + G +H +K+ + +++++N ++++Y+KCG + A+ +F
Sbjct: 44 TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN 103
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM-----HLLPNEYIFASAISACAGIQSLVK 118
+ +N+VSW+ M+ G G+ + QM + +E +A+ C L
Sbjct: 104 NNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPS 163
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+++H YSLK + V N+ ++ Y K G S A V+ + S+NALI G +
Sbjct: 164 LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 223
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ P + M GLLPD F+ L CS LR G +H ++ LE + FV
Sbjct: 224 SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 283
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++++LY + + F +E+K L+SWNT I ++ L VF++M +G
Sbjct: 284 YLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVL-YG 342
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
++ + + AC+ L S++ G++ HA+ ++ L D + +L++MYAK G I+ S
Sbjct: 343 IQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSS 402
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
K+FN + ++ SWN +I + H L A+KLFE+M+ TG PD +TF+G+LTACNH+G
Sbjct: 403 KVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSG 462
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL-----LEAEEYTKKFPLGQDPI 473
L+ EG Y + M+ ++G+ P+++H+ C+ID+LGRAG+L + AEE +++ +G
Sbjct: 463 LIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVG---- 518
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
+ +LLS+CR+ +++ +GE++A +LF L+P YVLLSNLYA G W DV R+ +
Sbjct: 519 IWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMN 578
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
+ L+K+ S IE+ F V E EI + L +
Sbjct: 579 EMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEM 622
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 174/359 (48%), Gaps = 10/359 (2%)
Query: 66 RNLVSWSAMISGHHQAG---EHLLAL----EFFSQMHLLPNEYIFASAISACAGIQSLVK 118
RN VSW++MI G E L L E +P+ + + CA + +
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ +H +++K + N+L+ MY K G ++A +++ N+VS+N ++ GF
Sbjct: 61 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120
Query: 179 NQQPEKGFEVFKLMLRQG--LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
F+V + ML G + D + + +C + L LHC ++K + N
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 180
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
V N +A Y+K + A++ F I K + SWN I + D L +M
Sbjct: 181 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS 240
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
G+ PD FT S+L+AC+ L S++ GK++H +IR L +D+ V +++++Y CG +
Sbjct: 241 -GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCT 299
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
LF+ M +++VSWNT+I + + AL +F QM GI+ ++ + + AC+
Sbjct: 300 VQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 358
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 5/157 (3%)
Query: 265 KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG---VRPDDFTFASILAACAGLASVQH 321
++ +SWN+ I S E+ + EM ++G PD T ++L CA +
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 322 GKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN 381
GK +H +++RL++++ + NAL++MY+KCG I+ + +F ++NVVSWNT++ +
Sbjct: 61 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120
Query: 382 HRLGGSALKLFEQMKATG--IKPDSVTFIGLLTACNH 416
+ QM A G +K D VT + + C H
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 157
>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 183/559 (32%), Positives = 302/559 (54%), Gaps = 6/559 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+ SLL + + + +H +K+G+ V N +++ Y KCG + +VF+E
Sbjct: 263 SVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNET 322
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
E+N VSW+++I+G G AL F M PN +S + ++ G+
Sbjct: 323 VEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGK 382
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+IH +S++ G + F+ NSLI MY K G+S++A ++ N+VS+NA+IA + N+
Sbjct: 383 EIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNR 442
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
P + M G P+ +F L C+ L G +H + V+ L S+ FV N
Sbjct: 443 LPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSN 502
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +Y+K + A F KD +S+N I S D + L++F EM G +
Sbjct: 503 SLIDMYAKCGCLHSARNVFN-TSRKDEVSYNILIIGYSETDDCLQSLNLFSEM-RLLGKK 560
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD +F +++ACA LA+++ GK++H +R L + V N+L++ Y KCG I + +L
Sbjct: 561 PDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRL 620
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN++L ++V SWNT+I + +A+ +FE M+ ++ D V++I +L+AC+H GLV
Sbjct: 621 FNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLV 680
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+ G YF+ M + P H+TC++DLLGRAG + EA + ++ P+ D + G LL
Sbjct: 681 ERGWQYFSEMLAQR-LEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLG 739
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ +V +G R A+ LF L+P Y+LLSN+YA G W + R+++K G KK
Sbjct: 740 ACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKN 799
Query: 541 PSYSMIEVQGTFEKFTVAE 559
P S +++ F E
Sbjct: 800 PGCSWVQIYDQVHAFVAEE 818
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 126/421 (29%), Positives = 221/421 (52%), Gaps = 6/421 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L CS + + +G+ +H V K+G DV V N +L LY CG + AR++FDEM ER+
Sbjct: 165 VLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERD 224
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISACAGIQSLVKGQQIH 123
+VSW+ +I G++ A ++ M L PN S + A ++ ++IH
Sbjct: 225 VVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIH 284
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
YS+K G S N+L+ Y K G V+ E E N VS+N++I G +
Sbjct: 285 CYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCW 344
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
F++M+ G P+ + + L + + G +H +++ E++ F+ N+++
Sbjct: 345 DALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLI 404
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K EA F ++ ++++SWN IA + + + +M + G P+
Sbjct: 405 DMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQM-QETGECPNA 463
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
TF ++L ACA L + GK+IHA +R+ L D+ V N+L++MYAKCG + + +FN
Sbjct: 464 VTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNT 523
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
++ VS+N +I ++ +L LF +M+ G KPD V+F+G+++AC + +K+G
Sbjct: 524 S-RKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQG 582
Query: 424 E 424
+
Sbjct: 583 K 583
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/466 (28%), Positives = 228/466 (48%), Gaps = 18/466 (3%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVI--VSNHVLNLYAKCGKMILARKVFDEMS 64
+LL CSK ++L Q +HA + G P + ++ +LN YAK +F++
Sbjct: 59 NLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILN-YAKFQHPGSFCSLFNQTF 117
Query: 65 E--RNLVSWSAMISGHHQAGEHLL-ALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
+ R W+ +I H A E +++M + +++ F + C+ + K
Sbjct: 118 QNCRTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICK 177
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF-V 177
G ++H K G+ + +VGN+L+ +Y G+ +DA ++ E E ++VS+N +I V
Sbjct: 178 GMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSV 237
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
E F ++LR + P+ S L I + D +HC +VK L+S
Sbjct: 238 NGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVT 297
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIA--ACS-HCADYEKGLSVFKEMS 294
N ++ Y K + + F EK+ +SWN+ I AC C D L+ F+ M
Sbjct: 298 TCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWD---ALNAFRMMI 354
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
D G +P+ T +SIL L + GK+IH +RM D+ + N+L++MYAK G
Sbjct: 355 -DAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHS 413
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ + +F+ + RN+VSWN +IA +A +RL A++ QM+ TG P++VTF +L AC
Sbjct: 414 TEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPAC 473
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
G + G+ ++M G++ D+ LID+ + G L A
Sbjct: 474 ARLGFLGPGKE-IHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSAR 518
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 183/364 (50%), Gaps = 7/364 (1%)
Query: 101 YIFASAISACAGIQSLVKGQQIHAYSLKFGY--ASISFVGNSLISMYMKVGYSSDALLVY 158
YI + ++ C+ +QSL++ +Q+HA + G+ S+S SLI Y K + ++
Sbjct: 55 YIHINLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCA-SLILNYAKFQHPGSFCSLF 113
Query: 159 GEAFEPNLVSF--NALI-AGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN 215
+ F+ +F N LI A + GFE + M+R+G+ D +F L++CS S
Sbjct: 114 NQTFQNCRTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSF 173
Query: 216 DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIA 275
D+ KGM +H + K +++ +VGNT++ LY + +A + F + E+D++SWNT I
Sbjct: 174 DICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIG 233
Query: 276 ACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN 335
S DY + + + M ++P+ + S+L A L + ++IH + +++ L+
Sbjct: 234 LLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLD 293
Query: 336 QDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM 395
V NALV+ Y KCG + +++FNE + +N VSWN+II A AL F M
Sbjct: 294 SQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMM 353
Query: 396 KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGK 455
G +P+SVT +L K G+ + G DI LID+ ++G
Sbjct: 354 IDAGAQPNSVTISSILPVLVELECFKAGKE-IHGFSMRMGTETDIFIANSLIDMYAKSGH 412
Query: 456 LLEA 459
EA
Sbjct: 413 STEA 416
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 183/402 (45%), Gaps = 57/402 (14%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +++L C++ L G +HA +++G+ D+ VSN ++++YAKCG + AR VF+
Sbjct: 463 AVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN 522
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVK 118
S ++ VS++ +I G+ + + L +L FS+M LL P+ F ISACA + +L +
Sbjct: 523 -TSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQ 581
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+++H +L+ S FV NSL+ Y K G A ++ + ++ S+N +I G+
Sbjct: 582 GKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGM 641
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ E +F+ M + D S+ L CS + +G + +LE
Sbjct: 642 IGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQRLEP---- 697
Query: 239 GNTIMALYSKFNLIGEA---EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
T M +L+G A E+A +LI++
Sbjct: 698 --TEMHYTCMVDLLGRAGFVEEAAKLIQQLP----------------------------- 726
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
+ PD + ++L AC +V+ G++ HL ++ Q G L N+YA+ G
Sbjct: 727 ---IAPDANIWGALLGACRIYGNVELGRRAAEHLFELK-PQHCGYYILLSNIYAETGRWD 782
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA 397
+ K+ M R A G S +++++Q+ A
Sbjct: 783 EANKIRELMKSRG-----------AKKNPGCSWVQIYDQVHA 813
>gi|357167761|ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Brachypodium distachyon]
Length = 773
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 180/556 (32%), Positives = 312/556 (56%), Gaps = 10/556 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
++++ S L C L G LH +K GI+ +V + + ++Y+KC A +F
Sbjct: 221 SRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCDMTEDACILFP 280
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
E++E+++VSW+ +I + + G A+E F +M L P+E + + +S ++ +
Sbjct: 281 ELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSCVLSGLGSSANVNR 340
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ HA ++ + + NSLISMY K A V+G + + S++ ++AG+ +
Sbjct: 341 GKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDESWSLMVAGYCK 400
Query: 179 NQQPEKGFEVFKLMLRQG---LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
K E+++ M + L D S + CS LR G +HC ++KC L+ N
Sbjct: 401 AGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVHCYSIKCLLDEN 460
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
+ N+++ +Y + A K F + + +D+++WN I++ SH LS++ +M
Sbjct: 461 S-ITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRSNDALSLYGQML 519
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
+ V+P+ T ++++ACA LA+++HG+ +H+++ M L DV + ALV+MY KCG +
Sbjct: 520 TED-VKPNSSTLITVISACANLAALEHGELLHSYVKNMGLESDVSISTALVDMYTKCGQL 578
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ +F+ ML R+VV+WN +I+ + H ALKLF +M+A IKP+S+TF+ +L+AC
Sbjct: 579 GTARGIFDSMLQRDVVTWNVMISGYGMHGEANQALKLFSEMEAGSIKPNSLTFLAILSAC 638
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
HAGLV EG F M Y + P+++H+ C++DLLG++G L EAE+ P+ D V
Sbjct: 639 CHAGLVDEGRKLFIRM-GGYRLEPNLKHYACMVDLLGKSGLLQEAEDLVLAMPIKPDGGV 697
Query: 475 LGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKD 534
GTLLSAC++ + +G R+AK+ F P Y+L+SN Y S W ++ R +K+
Sbjct: 698 WGTLLSACKVHDNFEMGLRVAKKAFSSDPRNDGYYILMSNSYGSAEKWDEIEKLRDTMKN 757
Query: 535 SGLKKEPSYSMIEVQG 550
G++K +S ++V G
Sbjct: 758 YGVEKGVGWSAVDVWG 773
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 129/449 (28%), Positives = 238/449 (53%), Gaps = 15/449 (3%)
Query: 21 GISLHAAVLKMGI---QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
G S+H+ +K G+ V VS+ ++ +YA+CG + A K+FDEM ER++V+W+A++SG
Sbjct: 132 GTSVHSYSVKFGLLAGDGSVAVSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSG 191
Query: 78 HHQAGEHLLALEFFSQMHLL-------PNEYIFASAISACAGIQSLVKGQQIHAYSLKFG 130
+ GE + + QM L PN S + AC + L G+ +H Y++K G
Sbjct: 192 CVRNGECGKGICYLVQMIRLAGDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEG 251
Query: 131 YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFK 190
+ V ++L SMY K + DA +++ E E ++VS+ LI + + E+F+
Sbjct: 252 IRDCALVVSALFSMYSKCDMTEDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQ 311
Query: 191 LMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN 250
M + GL PD + L S ++ +G H + ++ + + N+++++Y KF
Sbjct: 312 EMEQSGLQPDEVLVSCVLSGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFE 371
Query: 251 LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS-NDHGVRPDDFT-FAS 308
L+ A F ++ ++D SW+ +A K L ++++M DH D T S
Sbjct: 372 LVDVAGTVFGMLHQRDDESWSLMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLVS 431
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN-EMLHR 367
+++C+ L ++ G+ +H + I+ L+++ + N+L+ MY +CG + K+F L R
Sbjct: 432 AISSCSRLGRLRLGQSVHCYSIKCLLDEN-SITNSLIGMYGRCGNFELACKIFAVAKLRR 490
Query: 368 NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYF 427
+VV+WN +I+++++ AL L+ QM +KP+S T I +++AC + ++ GE
Sbjct: 491 DVVTWNALISSYSHVGRSNDALSLYGQMLTEDVKPNSSTLITVISACANLAALEHGE-LL 549
Query: 428 NSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+S K G+ D+ T L+D+ + G+L
Sbjct: 550 HSYVKNMGLESDVSISTALVDMYTKCGQL 578
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 126/494 (25%), Positives = 224/494 (45%), Gaps = 34/494 (6%)
Query: 22 ISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQA 81
+ LHA G+ + +++ Y+ G A F + W++++ HH A
Sbjct: 32 LRLHALASTSGLSSRPDFAAKLVSAYSSSGLPGFATLAFSASPCPDTFLWNSLLRSHHCA 91
Query: 82 GEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGY----ASI 134
+ AL +M P+ + A SA A + +L G +H+YS+KFG S+
Sbjct: 92 SDFDSALSAHRRMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSVKFGLLAGDGSV 151
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
+ V +SL+ MY + G DA+ ++ E E ++V++ A+++G V N + KG M+R
Sbjct: 152 A-VSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQMIR 210
Query: 195 ----QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN 250
G P+ + GLE C V +L G LH VK + V + + ++YSK +
Sbjct: 211 LAGDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCD 270
Query: 251 LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
+ +A F + EKD++SW I A + + +F+EM G++PD+ + +L
Sbjct: 271 MTEDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQS-GLQPDEVLVSCVL 329
Query: 311 AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVV 370
+ A+V GK HA +IR V + N+L++MY K L+ + +F + R+
Sbjct: 330 SGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDE 389
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKATGIKP---DSVTFIGLLTACNHAGLVKEGEAYF 427
SW+ ++A + L L+L+ QM+ D + + +++C+ G ++ G++
Sbjct: 390 SWSLMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSV- 448
Query: 428 NSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRD 487
Y I ++ + L+G G+ E K F + +LRRD
Sbjct: 449 ----HCYSIKCLLDENSITNSLIGMYGRCGNFELACKIFAVA-------------KLRRD 491
Query: 488 VVIGERLAKQLFHL 501
VV L H+
Sbjct: 492 VVTWNALISSYSHV 505
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 152/353 (43%), Gaps = 27/353 (7%)
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA- 281
LH L L S P +++ YS L G A AF D WN+ + + HCA
Sbjct: 34 LHALASTSGLSSRPDFAAKLVSAYSSSGLPGFATLAFSASPCPDTFLWNSLLRS-HHCAS 92
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRL---NQDV 338
D++ LS + M G RP FT +A A LA++ G +H++ ++ L + V
Sbjct: 93 DFDSALSAHRRM-RASGARPSRFTAPLAASAAAELAALPVGTSVHSYSVKFGLLAGDGSV 151
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM--- 395
V ++LV MYA+CG + + KLF+EM+ R+VV+W +++ + G + QM
Sbjct: 152 AVSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQMIRL 211
Query: 396 -KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID-LLGRA 453
+G +P+S T L AC G + G Y + I ++ L
Sbjct: 212 AGDSGARPNSRTMESGLEACGVLGELSAGRCLHG-----YAVKEGIRDCALVVSALFSMY 266
Query: 454 GKLLEAEEYTKKFP-LGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH------LQPTTT 506
K E+ FP L + +V T L RR + R A +LF LQP
Sbjct: 267 SKCDMTEDACILFPELTEKDVVSWTGLIGAYCRRGLA---REAVELFQEMEQSGLQPDEV 323
Query: 507 SPYVLLSNLYASDGM-WGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVA 558
+LS L +S + G A + ++ G + S+I + G FE VA
Sbjct: 324 LVSCVLSGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVA 376
>gi|357465513|ref|XP_003603041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492089|gb|AES73292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 729
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 183/545 (33%), Positives = 305/545 (55%), Gaps = 4/545 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I SLL C + + QG S+H +K G D ++N ++++YAKC + ++ +FDEM
Sbjct: 159 TIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLFDEM 218
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
E+++VSW+ MI + Q G A+ +F +M E S+++ + + + +H
Sbjct: 219 DEKSVVSWNTMIGVYGQNGLFDKAILYFKEM---LKEGFHPSSVTIMNLVSANAFPENVH 275
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
Y +K G+ + + V SL+ +Y K G+++ A +Y +L++ A+I+ + E E
Sbjct: 276 CYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEKGDIE 335
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
E F ++ + PD + G L + + G H VK L ++ V N ++
Sbjct: 336 SAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLI 395
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+LYS+F+ I A F + EK LI+WN+ I+ C + +F EMS G +PD
Sbjct: 396 SLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSM-CGKKPDA 454
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T AS+L+ C L +++ G+ +H++++R + + +G AL++MY+KCG + + K+F
Sbjct: 455 ITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYN 514
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
+ + +WN II+ ++ + L +A + +++ G+KPD +TF+G+L AC H GLV G
Sbjct: 515 IKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKITFLGVLAACTHGGLVYLG 574
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
YFN M K YG+ P ++H+ C++ LLG+ G EA E+ K + D V G LL+AC
Sbjct: 575 LEYFNIMTKEYGLMPSLQHYACIVALLGKEGLFKEAIEFINKMEIQPDSAVWGALLNACC 634
Query: 484 LRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSY 543
++R+V +GE LAK+LF L YVL+SNLYA G W DVA R+M+KDSG
Sbjct: 635 IQREVKLGECLAKKLFLLNHKNGGFYVLMSNLYAIVGRWDDVARVREMMKDSGGDGCSGV 694
Query: 544 SMIEV 548
S+I+V
Sbjct: 695 SVIDV 699
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 228/464 (49%), Gaps = 18/464 (3%)
Query: 11 HCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVS 70
HC T ALQ + LK G+ + V +++LY K G AR +FD+MS R++VS
Sbjct: 66 HCPSTAALQ-ARQIQTQCLKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVS 124
Query: 71 WSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSL 127
W+ +I G+ Q G A++ F M + PN+ S + +C + + +G+ IH + +
Sbjct: 125 WNVLICGYSQNGYLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGI 184
Query: 128 KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE 187
K G+ S + N+L+SMY K + L++ E E ++VS+N +I + +N +K
Sbjct: 185 KAGFGLDSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAIL 244
Query: 188 VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYS 247
FK ML++G P + + + + +HC VKC ++ V +++ LY+
Sbjct: 245 YFKEMLKEGFHPSSVTIMNLVSANAFPEN------VHCYVVKCGFTNDASVVTSLVCLYA 298
Query: 248 KFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFA 307
K A++ ++ KDLI+ I++ S D E + F + + ++PD
Sbjct: 299 KQGFTNTAKQLYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQ-TIQLDIKPDAVALI 357
Query: 308 SILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR 367
+L + G H + ++ L+ D V N L+++Y++ I + LF +M +
Sbjct: 358 GVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREK 417
Query: 368 NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYF 427
+++WN++I+ A++LF +M G KPD++T LL+ C G ++ GE
Sbjct: 418 PLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLH 477
Query: 428 NSMEKTYGISPDIEHF--TCLIDLLGRAGKLLEAEE--YTKKFP 467
+ + + + +E F T LID+ + G+L AE+ Y K P
Sbjct: 478 SYILRN---NVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDP 518
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 204/444 (45%), Gaps = 50/444 (11%)
Query: 93 QMHLLPNEYIFASAISA---------CAGIQSLVKGQQIHAYSLKFGYASISFVGNSLIS 143
Q ++ PNE+ F+ I A C +L + +QI LK G V SLI
Sbjct: 41 QANVNPNEFTFSLLIKAYLSSPSFTHCPSTAAL-QARQIQTQCLKRGVNQFIHVHTSLID 99
Query: 144 MYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFS 203
+YMK+G++S A ++ + ++VS+N LI G+ +N ++F MLR+ P++ +
Sbjct: 100 LYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRENFKPNQTT 159
Query: 204 FAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIE 263
L C + +G +H +K + + N +M++Y+K + + ++ F ++
Sbjct: 160 IVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLFDEMD 219
Query: 264 EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGK 323
EK ++SWNT I ++K + FKEM + G P T ++++A A +
Sbjct: 220 EKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKE-GFHPSSVTIMNLVSANA------FPE 272
Query: 324 QIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR 383
+H ++++ D V +LV +YAK G + + +L+ +++++ II++++
Sbjct: 273 NVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEKG 332
Query: 384 LGGSALKLFEQMKATGIKPDSVTFIGLL----------TACNHAGL-VKEG--------- 423
SA++ F Q IKPD+V IG+L C G VK G
Sbjct: 333 DIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVAN 392
Query: 424 -----EAYFNSMEKTYGISPDIEH-----FTCLIDLLGRAGKLLEAEEYTKKFPL-GQDP 472
+ F+ +E + D+ + +I +AGK +A E + + G+ P
Sbjct: 393 GLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKP 452
Query: 473 --IVLGTLLSACRLRRDVVIGERL 494
I + +LLS C ++ IGE L
Sbjct: 453 DAITIASLLSGCCQLGNLRIGETL 476
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 141/281 (50%), Gaps = 5/281 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++ +LH + G + H +K G+ D +V+N +++LY++ ++ A +F
Sbjct: 353 AVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFY 412
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVK 118
+M E+ L++W++MISG QAG+ A+E FS+M + P+ AS +S C + +L
Sbjct: 413 DMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRI 472
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ +H+Y L+ F+G +LI MY K G A V+ +P L ++NA+I+G+
Sbjct: 473 GETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSL 532
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPF 237
F + + QGL PD+ +F G L C+ + G+ + +T + L +
Sbjct: 533 YGLEHTAFGCYSKLQEQGLKPDKITFLGVLAACTHGGLVYLGLEYFNIMTKEYGLMPSLQ 592
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAAC 277
I+AL K L EA + +E + D W + AC
Sbjct: 593 HYACIVALLGKEGLFKEAIEFINKMEIQPDSAVWGALLNAC 633
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 187/576 (32%), Positives = 307/576 (53%), Gaps = 34/576 (5%)
Query: 34 QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQ 93
+P + N +L YAK + A + F++M+ER++VSW+ MI+ Q+G AL +
Sbjct: 201 RPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVE 260
Query: 94 MH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGY 150
MH + + + S+++ACA + SL G+Q+HA ++ +V ++LI +Y K G
Sbjct: 261 MHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGS 320
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
+A V+ + N VS+ LI G ++ + K E+F M + + D+F+ A +
Sbjct: 321 FKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISG 380
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
C DL G LH L +K V N++++LY+K + AE F + E+D++SW
Sbjct: 381 CFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSW 440
Query: 271 NTFIAACSHCADY-------------------------------EKGLSVFKEMSNDHGV 299
+ I A S + E GL ++ M + V
Sbjct: 441 TSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDV 500
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
PD T+ ++ CA + + + G QI H ++ L +V V NA + MY+KCG IS + K
Sbjct: 501 TPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQK 560
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
LF+ + ++VVSWN +I ++ H +G A K F+ M + G KPD ++++ +L+ C+H+GL
Sbjct: 561 LFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGL 620
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V+EG+ YF+ M + +GISP +EHF+C++DLLGRAG L EA++ K P+ V G LL
Sbjct: 621 VQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALL 680
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
SAC++ + + E AK +F L + Y+LL+ +Y+ G D A RK+++D G+KK
Sbjct: 681 SACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKK 740
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P YS +EV+ F + SH ++ I + L
Sbjct: 741 NPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDEL 776
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 128/544 (23%), Positives = 239/544 (43%), Gaps = 77/544 (14%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
++LLH AL L A +K +P+VI N ++N YAK G + A ++FD M
Sbjct: 43 NTLLHAYLSCGALSDARRLLRADIK---EPNVITHNIMMNGYAKQGSLSDAEELFDRMPR 99
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHL----LPNEYIFASAISACAGIQSLVKGQQ 121
R++ SW+ ++SG+ QA L LE F MH LPN + F + +C + Q
Sbjct: 100 RDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQ 159
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+ KF + V +L+ M+++ GY A ++ + P + N+++AG+ +
Sbjct: 160 LLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYG 219
Query: 182 PEKGFEVFKLML-------------------------------RQGLLPDRFSFAGGLEI 210
+ E F+ M R+G+ D ++ L
Sbjct: 220 IDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTA 279
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
C+ L G LH ++ + +P+V + ++ LY+K EA++ F +++++ +SW
Sbjct: 280 CARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSW 339
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
I + K + +F +M + + D F A++++ C + G+Q+H+ +
Sbjct: 340 TVLIGGSLQYECFSKSVELFNQMRAEL-MAIDQFALATLISGCFNRMDLCLGRQLHSLCL 398
Query: 331 RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA---------- 380
+ N+ + V N+L+++YAKCG + + +F+ M R++VSW ++I A++
Sbjct: 399 KSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKARE 458
Query: 381 -------------NHRLGG--------SALKLFEQM-KATGIKPDSVTFIGLLTACNHAG 418
N LG LK++ M + PD VT++ L C G
Sbjct: 459 FFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIG 518
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL--GQDPIVLG 476
K G+ K G+ ++ I + + G++ EA+ K F L G+D +
Sbjct: 519 ANKLGDQIIGHTVKA-GLILNVSVANAAITMYSKCGRISEAQ---KLFDLLNGKDVVSWN 574
Query: 477 TLLS 480
+++
Sbjct: 575 AMIT 578
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 219/459 (47%), Gaps = 49/459 (10%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ + +S L C++ +L G LHA V++ Q D V++ ++ LYAKCG A++VF+
Sbjct: 270 STTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFN 329
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
+ +RN VSW+ +I G Q ++E F+QM + +++ A+ IS C L
Sbjct: 330 SLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCL 389
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVS---------- 168
G+Q+H+ LK G+ V NSLIS+Y K G +A V+ E ++VS
Sbjct: 390 GRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQ 449
Query: 169 ---------------------FNALIAGFVENQQPEKGFEVFKLMLRQ-GLLPDRFSFAG 206
+NA++ ++++ E G +++ ML Q + PD ++
Sbjct: 450 IGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVT 509
Query: 207 GLEICSV--SNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE 264
C+ +N L +I H TVK L N V N + +YSK I EA+K F L+
Sbjct: 510 LFRGCADIGANKLGDQIIGH--TVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNG 567
Query: 265 KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ 324
KD++SWN I S ++ F +M + G +PD ++ ++L+ C+ VQ GK
Sbjct: 568 KDVVSWNAMITGYSQHGMGKQAAKTFDDMLS-KGAKPDYISYVAVLSGCSHSGLVQEGKL 626
Query: 325 IHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS-WNTIIAA---H 379
+ R+ ++ + + +V++ + G ++ + L ++M + W +++A H
Sbjct: 627 YFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIH 686
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
N L A K ++ + PDS +++ L + AG
Sbjct: 687 GNDELAELAAKHVFELDS----PDSGSYMLLAKIYSDAG 721
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 165/376 (43%), Gaps = 65/376 (17%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDA-LLVYGEA 161
A A+ +C +L + +H + G AS F+ N+L+ Y+ G SDA L+ +
Sbjct: 7 LADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADI 66
Query: 162 FEPNLV-------------------------------SFNALIAGFVENQQPEKGFEVFK 190
EPN++ S+N L++G+ + ++ G E F
Sbjct: 67 KEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFV 126
Query: 191 LMLRQG-LLPDRFSFAGGLEICS------------------------------VSNDLRK 219
M R G LP+ F+F ++ C V +R
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186
Query: 220 GMILHCLTVKCKLESNP-FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
G + + ++E F N+++A Y+K I A + F + E+D++SWN IAA S
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALS 246
Query: 279 HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
+ L + EM + GVR D T+ S L ACA L S+ GKQ+HA +IR D
Sbjct: 247 QSGRVREALGLVVEM-HRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDP 305
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
V +AL+ +YAKCG + ++FN + RN VSW +I + +++LF QM+A
Sbjct: 306 YVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAE 365
Query: 399 GIKPDSVTFIGLLTAC 414
+ D L++ C
Sbjct: 366 LMAIDQFALATLISGC 381
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 183/584 (31%), Positives = 319/584 (54%), Gaps = 15/584 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L C++ + + G +H +K+ + +++++N ++++Y+KCG + A+ +F
Sbjct: 294 TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN 353
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM-----HLLPNEYIFASAISACAGIQSLVK 118
+ +N+VSW+ M+ G G+ + QM + +E +A+ C L
Sbjct: 354 NNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPS 413
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+++H YSLK + V N+ ++ Y K G S A V+ + S+NALI G +
Sbjct: 414 LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 473
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ P + M GLLPD F+ L CS LR G +H ++ LE + FV
Sbjct: 474 SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 533
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++++LY + + F +E+K L+SWNT I ++ L VF++M +G
Sbjct: 534 YLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVL-YG 592
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
++ + + AC+ L S++ G++ HA+ ++ L D + +L++MYAK G I+ S
Sbjct: 593 IQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSS 652
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
K+FN + ++ SWN +I + H L A+KLFE+M+ TG PD +TF+G+LTACNH+G
Sbjct: 653 KVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSG 712
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL-----LEAEEYTKKFPLGQDPI 473
L+ EG Y + M+ ++G+ P+++H+ C+ID+LGRAG+L + AEE +++ +G
Sbjct: 713 LIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVG---- 768
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
+ +LLS+CR+ +++ +GE++A +LF L+P YVLLSNLYA G W DV R+ +
Sbjct: 769 IWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMN 828
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
+ L+K+ S IE+ F V E EI + L +
Sbjct: 829 EMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEM 872
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/418 (29%), Positives = 211/418 (50%), Gaps = 10/418 (2%)
Query: 8 LLHHCSKTKALQQGISLHAAVL-KMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
LL K K ++ G +H V ++ D ++ ++ +YA CG +R VFD + +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQI 122
NL W+A+IS + + + LE F +M LLP+ + + I ACAG+ + G +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H +K G FVGN+L+S Y G+ +DAL ++ E NLVS+N++I F +N
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 183 EKGFEVFKLMLRQ----GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
E+ F + M+ + +PD + L +C+ ++ G +H VK +L+ +
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM-SNDH 297
N +M +YSK I A+ F++ K+++SWNT + S D V ++M +
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 389
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
V+ D+ T + + C + + K++H + ++ + V NA V YAKCG +S +
Sbjct: 390 DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYA 449
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
++F+ + + V SWN +I HA +L QMK +G+ PDS T LL+AC+
Sbjct: 450 QRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 149/282 (52%), Gaps = 6/282 (2%)
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ-GLLP 199
+I+MY G D+ V+ NL +NA+I+ + N+ ++ E F M+ LLP
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
D F++ ++ C+ +D+ G+ +H L VK L + FVGN +++ Y + +A + F
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG---VRPDDFTFASILAACAGL 316
++ E++L+SWN+ I S E+ + EM ++G PD T ++L CA
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
+ GK +H +++RL++++ + NAL++MY+KCG I+ + +F ++NVVSWNT++
Sbjct: 306 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 365
Query: 377 AAHANHRLGGSALKLFEQMKATG--IKPDSVTFIGLLTACNH 416
+ + QM A G +K D VT + + C H
Sbjct: 366 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 186/529 (35%), Positives = 289/529 (54%), Gaps = 37/529 (6%)
Query: 43 VLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGH---HQAGEHLLALEFFSQMHLLPN 99
++ YA CG+ R +FDE+ ++N+V ++ MI + H + LL + + + P+
Sbjct: 77 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 136
Query: 100 EYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG 159
Y + + A +G + L G QIHA ++ G FVGN LISMY K G +A V
Sbjct: 137 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLD 196
Query: 160 EAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRK 219
+ ++VS+N+L+AG N Q + EV K M GL PD + A L
Sbjct: 197 QMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLL----------- 245
Query: 220 GMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSH 279
P V NT + + + ++ F + K L+SWN IA +
Sbjct: 246 ----------------PAVTNTCL------DNVSFVKEMFMKLANKSLVSWNVMIAVYMN 283
Query: 280 CADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG 339
+ + + +F +M DH V PD + AS+L AC L+++ G++IH +++R RL ++
Sbjct: 284 NSMPAEAVDIFLQME-DHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLL 342
Query: 340 VGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG 399
+ NAL++MYAKCG + + ++F++M R+VVSW ++I+A+ + G A+ LF +M+ G
Sbjct: 343 LENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLG 402
Query: 400 IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+ PDS+ F+ +L+AC+HAGL+ EG YF M + I P IEHF C++DLLGRAG++ EA
Sbjct: 403 LNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEA 462
Query: 460 EEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASD 519
+ K+ P+ + V G LLSACR+ +++IG A QLF L P + YVLLSN+YA
Sbjct: 463 YGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKA 522
Query: 520 GMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
G W DV R ++K G+KK P S E+ F + SH + +I
Sbjct: 523 GRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQI 571
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 202/456 (44%), Gaps = 68/456 (14%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L S ++ L G+ +HAAV+++G+ +V V N ++++Y KCG ++ A +V D+M R+
Sbjct: 143 VLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRD 202
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHA 124
+VSW+++++G + G+ ALE +M LL P+ AS + A
Sbjct: 203 VVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNT----------- 251
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
++SFV M+MK+ S LVS+N +IA ++ N P +
Sbjct: 252 -----CLDNVSFVK----EMFMKLANKS-------------LVSWNVMIAVYMNNSMPAE 289
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
++F M + PD S A L C + L G +H V+ +L+ N + N ++
Sbjct: 290 AVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALID 349
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y+K + A + F ++ +D++SW + I+A +S+F M D G+ PD
Sbjct: 350 MYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRM-QDLGLNPDSI 408
Query: 305 TFASILAACAGLASVQHGKQIHAHL-----IRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
F S+L+AC+ + G+ + I R+ V +V++ + G + +Y
Sbjct: 409 AFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFV----CMVDLLGRAGQVDEAYG 464
Query: 360 LFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+M + N W ++ SA +++ M IGLL A
Sbjct: 465 FIKQMPMEPNERVWGALL----------SACRVYSNM-----------IIGLLAADQLFQ 503
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
L E Y+ + Y + E T + ++ G
Sbjct: 504 LCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKG 539
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 160/345 (46%), Gaps = 36/345 (10%)
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
+G L+ Y G ++ E + N+V FN +I +V N VFK M G
Sbjct: 73 LGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHG 132
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
+ PD +++ L+ S S DL GM +H V+ L+ N FVGN ++++Y K + EA
Sbjct: 133 IDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEAC 192
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
+ + +D++SWN+ +A C+ ++ L V KEM G++PD T AS+L A
Sbjct: 193 RVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMEL-LGLKPDAGTMASLLPA---- 247
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
V N ++ +S ++F ++ ++++VSWN +I
Sbjct: 248 -----------------------VTNTCLDN------VSFVKEMFMKLANKSLVSWNVMI 278
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
A + N+ + A+ +F QM+ + PD+++ +L AC + G + + +
Sbjct: 279 AVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKR-L 337
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
P++ LID+ + G L A E + +D + +++SA
Sbjct: 338 QPNLLLENALIDMYAKCGCLEYAREVFDQMKF-RDVVSWTSMISA 381
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 76/122 (62%), Gaps = 3/122 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A SI+S+L C AL G +H V++ +QP++++ N ++++YAKCG + AR+VFD
Sbjct: 306 AISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFD 365
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVK 118
+M R++VSW++MIS + G+ A+ FS+M L P+ F S +SAC+ L +
Sbjct: 366 QMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDE 425
Query: 119 GQ 120
G+
Sbjct: 426 GR 427
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 86/166 (51%), Gaps = 3/166 (1%)
Query: 318 SVQHGKQIHAHL-IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
+++ K++H+ + I L+ + +G L+ YA CG + +F+E+ +NVV +N +I
Sbjct: 50 DIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMI 109
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
++ N+ L AL +F+ M GI PD T+ +L A + + + G ++ + G+
Sbjct: 110 RSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRV-GL 168
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
++ LI + G+ G L+EA + P +D + +L++ C
Sbjct: 169 DLNVFVGNGLISMYGKCGCLVEACRVLDQMPC-RDVVSWNSLVAGC 213
>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Vitis vinifera]
Length = 825
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 194/567 (34%), Positives = 318/567 (56%), Gaps = 17/567 (2%)
Query: 24 LHAAVLKMG--IQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQA 81
L+ V+K+G D V + + +YA+ G + AR++FD ERN W+ MI G+ Q
Sbjct: 240 LYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQN 299
Query: 82 GEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
+ A++ F Q+ + ++ F SA++A + +Q L G+Q+HAY LK +
Sbjct: 300 NCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSSTILQVVI 359
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
N++I MY + G + V+ E ++V++N +++ FV+N ++G + M +QG
Sbjct: 360 LNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGF 419
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG--NTIMALYSKFNLIGEA 255
+ D + L + S G H ++ ++ F G + ++ +Y+K LI A
Sbjct: 420 MVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQ---FEGMDSYLIDMYAKSGLITTA 476
Query: 256 EKAFRLIEE--KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
++ F + +D +WN IA + E+G +VF++M + VRP+ T ASIL AC
Sbjct: 477 QQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMI-EQNVRPNAVTLASILPAC 535
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
+ ++ GKQIH IR LN++V VG AL++MY+K G I+ + +F E L +N V++
Sbjct: 536 NPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYT 595
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT 433
T+I+++ H +G AL LF M +GIKPDSVTF+ +L+AC++AGLV EG F SME+
Sbjct: 596 TMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMERE 655
Query: 434 YGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF-PLGQDPIVLGTLLSACRLRRDVVIGE 492
Y I P EH+ C+ D+LGR G+++EA E+ K G + G+LL ACR+ + +G+
Sbjct: 656 YKIQPSAEHYCCVADMLGRVGRVVEAYEFVKGLGEEGNTFGIWGSLLGACRIHGEFELGK 715
Query: 493 RLAKQLFHLQ--PTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQG 550
+A +L ++ + T +VLLSN+YA++G W +V RK ++ GL KE S +EV G
Sbjct: 716 VVANKLLEMEKGSSLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVEVAG 775
Query: 551 TFEKFTVAEFSHSKIGEINYMLKTLSL 577
F + H + EI ML+ L++
Sbjct: 776 HVNCFMSRDHKHPQCAEIYQMLEKLAM 802
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 145/537 (27%), Positives = 259/537 (48%), Gaps = 35/537 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMI--------- 54
+ SS L C++ ++L+ G +LH VL+ IV N +LN+Y+ C +
Sbjct: 106 TFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDF 165
Query: 55 ----LARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFS---QMHLLPNEYIFASAI 107
L R+VFD M +RN+V+W+ MIS + + + A + F +M + P F +
Sbjct: 166 NNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVF 225
Query: 108 SACAGIQSLVKGQQIHAYSLKFG--YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPN 165
A + ++ +K G + FV +S I MY ++G A ++ E N
Sbjct: 226 PAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERN 285
Query: 166 LVSFNALIAGFVENQQPEKGFEVF-KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILH 224
+N +I G+V+N P + ++F ++M + + D +F L S L G LH
Sbjct: 286 TEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLH 345
Query: 225 CLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYE 284
+K + N I+ +YS+ IG + K F + E+D+++WNT ++A +
Sbjct: 346 AYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDD 405
Query: 285 KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNAL 344
+GL + M G D T ++L+ + L S + GKQ HA+LIR + Q G+ + L
Sbjct: 406 EGLMLVFAMQK-QGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGI-QFEGMDSYL 463
Query: 345 VNMYAKCGLISCSYKLF--NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
++MYAK GLI+ + +LF N R+ +WN +IA + + L +F +M ++P
Sbjct: 464 IDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRP 523
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
++VT +L ACN G + G+ + + ++ ++ T L+D+ ++G + AE
Sbjct: 524 NAVTLASILPACNPMGTIGLGKQIHGFAIRCF-LNRNVFVGTALLDMYSKSGAITYAENV 582
Query: 463 TKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH------LQPTTTSPYVLLS 513
+ L ++ + T++S+ +GER A LFH ++P + + +LS
Sbjct: 583 FAE-TLEKNSVTYTTMISSYGQHG---MGER-ALSLFHAMLGSGIKPDSVTFVAILS 634
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 212/440 (48%), Gaps = 43/440 (9%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP----NEYIFASAISACA 111
A +FD + V W+ +I G + AL F+++M P + Y F+S + ACA
Sbjct: 56 ALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACA 115
Query: 112 GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMY----MKVGYSSDAL---------LVY 158
+SL G+ +H + L+ + S V NSL++MY +V Y A V+
Sbjct: 116 QARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVF 175
Query: 159 GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLR 218
+ N+V++N +I+ +V+ ++ + F++F+ M+R G+ P SF +D
Sbjct: 176 DTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMSDYD 235
Query: 219 KGMILHCLTVK--CKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
+L+ L VK + FV ++ + +Y++ + A + F E++ WNT I
Sbjct: 236 NANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGG 295
Query: 277 CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
+ + +F ++ DD TF S L A + L ++ G+Q+HA++++
Sbjct: 296 YVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSSTIL 355
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
V + NA++ MY++CG I S+K+F+ ML R+VV+WNT+++A + L L L M+
Sbjct: 356 QVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQ 415
Query: 397 ATGIKPDSVTFIGLLT-ACN----------HAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
G DSVT LL+ A N HA L++ G F M+ +
Sbjct: 416 KQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHG-IQFEGMD------------SY 462
Query: 446 LIDLLGRAGKLLEAEEYTKK 465
LID+ ++G + A++ +K
Sbjct: 463 LIDMYAKSGLITTAQQLFEK 482
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 172/332 (51%), Gaps = 11/332 (3%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S L S+ + L+ G LHA +LK V++ N ++ +Y++CG + + KVF M ER
Sbjct: 327 SALTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLER 386
Query: 67 NLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
++V+W+ M+S Q G E L+ + + + + + +S + ++S G+Q H
Sbjct: 387 DVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAH 446
Query: 124 AYSLKFGYASISFVG--NSLISMYMKVGYSSDA--LLVYGEAFEPNLVSFNALIAGFVEN 179
AY ++ G I F G + LI MY K G + A L ++ + ++NA+IAG+ +N
Sbjct: 447 AYLIRHG---IQFEGMDSYLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQN 503
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
E+GF VF+ M+ Q + P+ + A L C+ + G +H ++C L N FVG
Sbjct: 504 GLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVG 563
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ +YSK I AE F EK+ +++ T I++ E+ LS+F M G+
Sbjct: 564 TALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGS-GI 622
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
+PD TF +IL+AC+ V G +I + R
Sbjct: 623 KPDSVTFVAILSACSYAGLVDEGLRIFQSMER 654
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A +++S+L C+ + G +H ++ + +V V +L++Y+K G + A VF
Sbjct: 525 AVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFA 584
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
E E+N V+++ MIS + Q G AL F M + P+ F + +SAC+
Sbjct: 585 ETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACS 637
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 176/493 (35%), Positives = 280/493 (56%), Gaps = 2/493 (0%)
Query: 85 LLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISM 144
L L+ L P ++ S I+ACA ++L + IHA+ + A +F+ NSLI M
Sbjct: 45 LRELDLLHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHM 104
Query: 145 YMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSF 204
Y K G SDA V+ + ++VS+ LIAG+ +N P + + MLR P+ F+F
Sbjct: 105 YCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTF 164
Query: 205 AGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE 264
L+ G +H L VK + + +VG+ ++ +Y++ + A F +
Sbjct: 165 TSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVS 224
Query: 265 KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ 324
K+ +SWN IA + AD E L F EM + G FT++S+ +A A + +++ G+
Sbjct: 225 KNEVSWNALIAGFARKADGETTLMKFAEMQRN-GFGATHFTYSSMFSAFARIGALEQGRW 283
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
+HAHLI+ VGN ++ MYAK G + + K+F+ M R++V+WNT++ A A + L
Sbjct: 284 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 343
Query: 385 GGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFT 444
G A+ FE+++ GI+ + +TF+ +LTAC+H GLVKEG+ YF+ M K Y + P+I+H+
Sbjct: 344 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMM-KDYNVQPEIDHYV 402
Query: 445 CLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPT 504
+DLLGRAG L EA + K P+ V G LL ACR+ ++ +G+ A +F L P
Sbjct: 403 SFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPD 462
Query: 505 TTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSK 564
T P VLL N+YAS G W D A RKM+K +G+KKEP+ S ++++ + F + +H K
Sbjct: 463 DTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPK 522
Query: 565 IGEINYMLKTLSL 577
G+I M + +++
Sbjct: 523 SGDIYRMWEEINM 535
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 193/389 (49%), Gaps = 8/389 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S++ C++ K L ++HA + + + D + N ++++Y KCG + AR VFD+M R
Sbjct: 65 SIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSR 124
Query: 67 NLVSWSAMISGHHQ---AGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
++VSW+ +I+G+ Q E + L + PN + F S + A G+Q+H
Sbjct: 125 DVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMH 184
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A ++K+ + +VG++L+ MY + A++V+ N VS+NALIAGF E
Sbjct: 185 ALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGE 244
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
F M R G F+++ + L +G +H +K + FVGNT++
Sbjct: 245 TTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTML 304
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K + +A K F ++++DL++WNT + A + ++ ++ F+E+ G++ +
Sbjct: 305 GMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKC-GIQLNQ 363
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK-LFN 362
TF S+L AC+ V+ GK + + ++ + V++ + GL+ + +F
Sbjct: 364 ITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFK 423
Query: 363 EMLHRNVVSWNTIIAA---HANHRLGGSA 388
+ W ++ A H N ++G A
Sbjct: 424 MPMEPTAAVWGALLGACRMHKNAKMGQYA 452
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 142/314 (45%), Gaps = 7/314 (2%)
Query: 170 NALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK 229
A+ F + G L+ L P + + C+ +L +H +
Sbjct: 29 RAVPISFPSSPASSTGLRELDLLHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSR 88
Query: 230 CKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSV 289
L + F+ N+++ +Y K + +A F + +D++SW IA + + + +
Sbjct: 89 SCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGL 148
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
+M RP+ FTF S+L A G+Q+HA ++ ++DV VG+AL++MYA
Sbjct: 149 LPDMLRAR-FRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYA 207
Query: 350 KCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
+C + + +F+ ++ +N VSWN +IA A G + L F +M+ G T+
Sbjct: 208 RCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSS 267
Query: 410 LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF--TCLIDLLGRAGKLLEAEEYTKKFP 467
+ +A G +++G + K+ + F ++ + ++G +++A + +
Sbjct: 268 MFSAFARIGALEQGRWVHAHLIKS---GQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMD 324
Query: 468 LGQDPIVLGTLLSA 481
+D + T+L+A
Sbjct: 325 -KRDLVTWNTMLTA 337
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 146/308 (47%), Gaps = 15/308 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +SLL G +HA +K DV V + +L++YA+C +M +A VFD +
Sbjct: 163 TFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRL 222
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+N VSW+A+I+G + + L F++M + ++S SA A I +L +G+
Sbjct: 223 VSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGR 282
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+HA+ +K G +FVGN+++ MY K G DA V+ + +LV++N ++ +
Sbjct: 283 WVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYG 342
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
++ F+ + + G+ ++ +F L CS +++G H + P + +
Sbjct: 343 LGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGK--HYFDMMKDYNVQPEIDH 400
Query: 241 TI--MALYSKFNLIGEAEK-AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+ + L + L+ EA F++ E W + AC + + G + + DH
Sbjct: 401 YVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMG-----QYAADH 455
Query: 298 --GVRPDD 303
+ PDD
Sbjct: 456 VFELDPDD 463
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 185/574 (32%), Positives = 310/574 (54%), Gaps = 14/574 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+LL C + L Q + A ++ G++ + V+ + + ++ ++ ARK+FD++ +
Sbjct: 17 TLLRSCKNYERLHQ---IQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIPQP 73
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIH 123
N +W+AM G+ Q G H + F +++ +PN + F I +C ++ + +G+++H
Sbjct: 74 NTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEEVH 133
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ K G+ S SFV SLI MY K G DA V+GE E N+V + A+I G++
Sbjct: 134 CCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGDVV 193
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
G +F L + ++ +G +E K M + N ++
Sbjct: 194 SGRRLFDLAPERDVVMWSVLISGYIE--------SKNMAAARELFDKMPNRDTMSWNAML 245
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
Y+ + EK F + E+++ SWN I + + L FK M + V P+D
Sbjct: 246 NGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPND 305
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
FT ++L+AC+ L ++ GK +H + + ++ VGN L++MYAKCG+I + +FN
Sbjct: 306 FTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNC 365
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
+ ++++SWNTII A H AL +F++MK+ G +PD VTF+G+L+AC H GLVK+G
Sbjct: 366 LDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDG 425
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
YF SM Y I P IEH+ C++DLLGRAG L +A + +K P+ D ++ LL ACR
Sbjct: 426 FLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGACR 485
Query: 484 LRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSY 543
L ++V I E ++L L+P + +V++SN+Y G DVA + ++D+G +K P
Sbjct: 486 LYKNVEIAELALQRLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGFRKLPGC 545
Query: 544 SMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
S+IE + +F + HS+ I +LK L++
Sbjct: 546 SVIECNDSVVEFYSLDERHSETESIYRVLKGLTM 579
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 88/178 (49%), Gaps = 7/178 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L CS+ AL G +H +G + ++ V N ++++YAKCG + A VF+ +
Sbjct: 307 TLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCL 366
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
++++SW+ +I+G G AL F +M P+ F +SAC + LVK
Sbjct: 367 DRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHM-GLVKDG 425
Query: 121 QIHAYSLKFGYASISFVGN--SLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIAG 175
++ S+ Y+ + + + ++ + + G AL + EP+ V + AL+
Sbjct: 426 FLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGA 483
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 184/576 (31%), Positives = 309/576 (53%), Gaps = 17/576 (2%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
+H C ++L+Q +HA ++ G+ D V + V + K + FD +++ +L
Sbjct: 12 IHRCKTIRSLKQ---IHAHLIASGLLHDEFVLSKVSEFFGK--HIGFVDYAFDFLNQTDL 66
Query: 69 ----VSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
+ ++ +I+ + + A + ++ +P+ Y F + AC + +G+Q
Sbjct: 67 HVGTLPYNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQ 126
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H ++K G+ +V NSL+ Y G A V+ E ++VS+ LI+G+V
Sbjct: 127 VHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGL 186
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ E L L+ ++P+ +F L C L G +H L K VGN
Sbjct: 187 FD---EAINLFLKMDVVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNA 243
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y K + EA K F + ++D++SW + I+ C + L +F +M GV P
Sbjct: 244 LVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQIS-GVEP 302
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D S+L+ACA L ++ +G+ + ++ R + D+ +G ALV+MYAKCG I + +F
Sbjct: 303 DRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIF 362
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
N + +RN+ +WN ++ A H G ALK FE M GI+P+ VTF+ +LTAC H+GLV
Sbjct: 363 NGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVA 422
Query: 422 EGEAYFNSM-EKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG +YF M + + SP +EH+ C+IDLL RAG L EA ++ + PL D ++ G LLS
Sbjct: 423 EGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLS 482
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC+ +V + + + L L+ + YVLLSN+YA++ W DV R+++KD G++K
Sbjct: 483 ACKANGNVELSQEILSHLLELKSQDSGVYVLLSNIYATNERWDDVTRVRRLMKDKGIRKF 542
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
P S+IEV G +F V + +HS+ +I+ +L L+
Sbjct: 543 PGSSVIEVDGEAHEFLVGDTNHSRNEDIHILLNILA 578
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 188/374 (50%), Gaps = 4/374 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L C+K +Q+G +H +KMG D+ V N +L+ Y+ CGK A +VFDEM R+
Sbjct: 111 VLKACTKFLGVQEGEQVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRD 170
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSL 127
+VSW+ +ISG+ + G A+ F +M ++PN F S + AC + L G+ +H
Sbjct: 171 VVSWTGLISGYVRTGLFDEAINLFLKMDVVPNVATFVSVLVACGRMGYLSMGKGVHGLVY 230
Query: 128 KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE 187
K + VGN+L+ MY+K +A ++ E + ++VS+ ++I+G V+ +QP+ E
Sbjct: 231 KRAFGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLE 290
Query: 188 VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYS 247
+F M G+ PDR L C+ L G + + +E + +G ++ +Y+
Sbjct: 291 LFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYA 350
Query: 248 KFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFA 307
K I A F I +++ +WN + + + L F+ M G+RP++ TF
Sbjct: 351 KCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGA-GIRPNEVTFL 409
Query: 308 SILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN--ALVNMYAKCGLISCSYKLFNEM- 364
+IL AC V G+ +I N + + ++++ + GL+ +YK M
Sbjct: 410 AILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMP 469
Query: 365 LHRNVVSWNTIIAA 378
L +V+ W +++A
Sbjct: 470 LPPDVLIWGALLSA 483
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 145/310 (46%), Gaps = 18/310 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S+L C + L G +H V K ++V N ++++Y KC + ARK+FDE+
Sbjct: 205 TFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCEARKLFDEL 264
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
+R++VSW+++ISG Q + +LE F M + P+ I S +SACA + +L G+
Sbjct: 265 PDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGR 324
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+ Y + G +G +L+ MY K G AL ++ N+ ++NAL+ G +
Sbjct: 325 WVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHG 384
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKG------MILHCLTVKCKLES 234
+ + F+LM+ G+ P+ +F L C S + +G MI +LE
Sbjct: 385 HGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEH 444
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKEM 293
++ L + L+ EA K R + D++ W ++AC + E + +
Sbjct: 445 Y----GCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACKANGNVELSQEILSHL 500
Query: 294 ----SNDHGV 299
S D GV
Sbjct: 501 LELKSQDSGV 510
>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 765
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 186/579 (32%), Positives = 306/579 (52%), Gaps = 5/579 (0%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+S L C AL G H + +M + + N +L +Y C A + FD+
Sbjct: 93 RSYEYLFKMCGTLGALSDGKLFHNRLQRMA-NSNKFIDNCILKMYCDCKSFTSAERFFDK 151
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
+ +++L SWS +IS + + G A+ F +M + PN IF++ I + L G
Sbjct: 152 IVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDPSMLDLG 211
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+QIH+ ++ G+A+ + + +MY+K G+ A + + N V+ L+ G+ +
Sbjct: 212 KQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMVGYTKA 271
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ +F M+ +G+ D F F+ L+ C+ DL G +H +K LES VG
Sbjct: 272 ARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVG 331
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ Y K A +AF I E + SW+ IA +++ L VFK + + GV
Sbjct: 332 TPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIRS-KGV 390
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+ F + +I AC+ ++ + G QIHA I+ L + +A+++MY+KCG + +++
Sbjct: 391 LLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQ 450
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
F + + V+W II AHA H AL+LF++M+ +G++P++VTFIGLL AC+H+GL
Sbjct: 451 AFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGL 510
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
VKEG+ +SM YG++P I+H+ C+ID+ RAG L EA E + P D + +LL
Sbjct: 511 VKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLL 570
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
C R++ IG A +F L P ++ YV++ NLYA G W + A RKM+ + L+K
Sbjct: 571 GGCWSHRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRK 630
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSLA 578
E S S I V+G +F V + H + +I LK L+ +
Sbjct: 631 EVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKELNFS 669
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 186/587 (31%), Positives = 307/587 (52%), Gaps = 43/587 (7%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMI-LARKVFDEMSERNLVSWSAMISGHHQA 81
SL LK G + DV++ +LN+Y++ ++ A K F+ M ERN +WS MI+
Sbjct: 245 SLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHG 304
Query: 82 GEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGY--ASISFVGN 139
G A+ + + + S A I L + +I + F I N
Sbjct: 305 GRIDAAIAVYERDPV-------KSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWN 357
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
+LI+ YM+ G ++A ++ + N +S+ +IAG+ +N + E+ + + + R G+LP
Sbjct: 358 ALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLP 417
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
S CS L G +H L VK + N F N ++ +Y K + A + F
Sbjct: 418 SLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVF 477
Query: 260 RLIEEKDLISWNTFIAAC-------------------------------SHCADYEKGLS 288
+ KD++SWN+F+AA +H + +
Sbjct: 478 SRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMG 537
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMY 348
FK M +H + P+ +L C L + + G+QIH I++ ++ ++ V NAL++MY
Sbjct: 538 AFKTMFCEHEL-PNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMY 596
Query: 349 AKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
KCG S ++F+ M R++ +WNTII +A H LG A+K+++ M++ G+ P+ VTF+
Sbjct: 597 FKCGCAD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFV 655
Query: 409 GLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
GLL AC+HAGLV EG +F SM + YG++P EH+ C++DLLGR G + AE++ P+
Sbjct: 656 GLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPI 715
Query: 469 GQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGA 528
D ++ LL AC++ ++ IG+R A++LF ++P+ YV+LSN+Y+S GMWG+VA
Sbjct: 716 EPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEV 775
Query: 529 RKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
RK++K G+ KEP S +++ F + H +I EI L+ L
Sbjct: 776 RKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEEL 822
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 117/488 (23%), Positives = 226/488 (46%), Gaps = 56/488 (11%)
Query: 33 IQPDVIVSNHVLNLYAKCGKMILARKVFD------------------------------- 61
++ + + N +++ Y + G + +AR++FD
Sbjct: 123 LERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFE 182
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
+M ERNLVSW+ MISG+ + H A + F +MH LLP++ FASA+SA G+ +L
Sbjct: 183 KMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDV 242
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA-FEPNLVSFNALIAGFV 177
+ + +LK G+ +G +++++Y + D + + E+ E N +++ +IA
Sbjct: 243 LESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALS 302
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ + V++ + + R + GL C +D R + + P
Sbjct: 303 HGGRIDAAIAVYERDPVKSIAC-RTALITGLAQCGRIDDAR---------ILFEQIPEPI 352
Query: 238 V--GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
V N ++ Y + ++ EA++ F + ++ ISW IA + E+ L + +E+
Sbjct: 353 VVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHR 412
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
G+ P + SI AC+ + +++ G Q+H+ +++ + NAL+ MY KC +
Sbjct: 413 S-GMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNME 471
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ ++F+ M+ +++VSWN+ +AA + L A F+ M + D V++ +++A
Sbjct: 472 YARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAYA 527
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE-YTKKFPLGQDP-- 472
HA E F +M + + P+ T L+ + G G ++ +T LG D
Sbjct: 528 HAEQSNEAMGAFKTMFCEHEL-PNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSEL 586
Query: 473 IVLGTLLS 480
IV L+S
Sbjct: 587 IVANALIS 594
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 186/383 (48%), Gaps = 48/383 (12%)
Query: 43 VLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYI 102
+L+ Y + G+++ AR+VFD M ERN V+W+AMIS + Q G+ +A F M
Sbjct: 102 LLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAM-------- 153
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+ + ++ NS+++ Y DA ++ +
Sbjct: 154 ---------------PSRDVSSW-------------NSMLTGYCHSLQMVDARNLFEKMP 185
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
E NLVS+ +I+G+ + K +++F M R+GLLPD+ +FA L +L
Sbjct: 186 ERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLES 245
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSK-FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
L L +K E + +G I+ +YS+ +++ A K F + E++ +W+T IAA SH
Sbjct: 246 LRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGG 305
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
+ ++V++ R + A A GLA Q G+ A ++ ++ + + V
Sbjct: 306 RIDAAIAVYE--------RDPVKSIACRTALITGLA--QCGRIDDARILFEQIPEPIVVS 355
Query: 342 -NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGI 400
NAL+ Y + G+++ + +LF++M RN +SW +IA +A + AL L +++ +G+
Sbjct: 356 WNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGM 415
Query: 401 KPDSVTFIGLLTACNHAGLVKEG 423
P + + AC++ ++ G
Sbjct: 416 LPSLSSLTSIFFACSNIVALETG 438
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 140/310 (45%), Gaps = 37/310 (11%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKV---- 59
S++S+ CS AL+ G +H+ +K+G Q + N ++ +Y KC M AR+V
Sbjct: 421 SLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRM 480
Query: 60 ---------------------------FDEMSERNLVSWSAMISGHHQAGEHLLALEFFS 92
FD M R+ VSW+ +IS + A + A+ F
Sbjct: 481 VTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFK 540
Query: 93 QM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
M H LPN I + C + + GQQIH ++K G S V N+LISMY K G
Sbjct: 541 TMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG 600
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
+D+ ++ E ++ ++N +I G+ ++ + ++++ M G+LP+ +F G L
Sbjct: 601 -CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLN 659
Query: 210 ICSVSNDLRKGM-ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK-AFRLIEEKDL 267
CS + + +G ++ L P ++ L + + AE+ + + E D
Sbjct: 660 ACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDT 719
Query: 268 ISWNTFIAAC 277
+ W+ + AC
Sbjct: 720 VIWSALLGAC 729
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 193/582 (33%), Positives = 315/582 (54%), Gaps = 15/582 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVI---VSNHVLNLYAKCGKMILARKVF 60
S ++L+ CS ++AL G +H+ +L + D + V+ ++++Y KCG + A VF
Sbjct: 439 SFIAILNACSNSEALDFGRKIHSLILTR--RRDYVESSVATMLVSMYGKCGSIAEAELVF 496
Query: 61 DEMS--ERNLVSWSAMISGHHQ---AGEHLLALEFFSQMHLLPNEYIFASAISACAGIQS 115
EM R+LV+W+ M+ + Q + E AL Q +LP+ F S +S+C Q
Sbjct: 497 KEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQ- 555
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
+ Q + L+ GY S + + +LISM+ + A V+ E ++VS+ A+++
Sbjct: 556 --EAQVLRMCILESGYRS-ACLETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSA 612
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
EN+ ++ +F+ M +G++PD+F+ A L+ C S L G I+H + LE++
Sbjct: 613 TAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEAD 672
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
V N ++ +YS EA F ++ +DL+SWN AA + ++ + +F+ M
Sbjct: 673 IAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQL 732
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
+ GV+PD TF++ L G A V GK H L+ DV V LV +YAKCG +
Sbjct: 733 E-GVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLD 791
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ LF VV N II A A H A+K+F +M+ G++PD T + +++AC
Sbjct: 792 EAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACG 851
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
HAG+V+EG + F +M++ +GISP +EH+ C +DLLGRAG+L AE+ +K P + +V
Sbjct: 852 HAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVW 911
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
+LL C+L+ D +GER A+++ L P ++ +V+LSN+Y + G W D RK L D
Sbjct: 912 TSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKLLDQ 971
Query: 536 GLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
+K P S +E+ +F + SH + EI +L L L
Sbjct: 972 NVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIYVVLDKLEL 1013
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 146/488 (29%), Positives = 251/488 (51%), Gaps = 28/488 (5%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
++LL C + L +G H + G++ + + N ++N+Y +CG + A +F +M E
Sbjct: 29 TALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEE 88
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHL----LPNEYIFASAISACAGIQSLVKGQQ 121
RN+VSW+A+IS + Q+G A F M L PN Y + ++ACA + L G+
Sbjct: 89 RNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRS 148
Query: 122 IHAYSLKFGY----ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
IHA + G + + VGN++I+MY K G DA+ V+ E ++VS+ A+ +
Sbjct: 149 IHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYA 208
Query: 178 ENQQ--PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+ ++ P+ +F+ ML Q L P+ +F L C+ LR G LH L + L +
Sbjct: 209 QERRFYPD-ALRIFREMLLQPLAPNVITFITALGACT---SLRDGTWLHSLLHEAGLGFD 264
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLI------EEKDLISWNTFIAACSHCADYEKGLSV 289
P GN ++ +Y K G+ E A+ + +E DL+SWN I+A + +++
Sbjct: 265 PLAGNALINMYGK---CGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAI 321
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHG--KQIHAHLIRMRLNQDVGVGNALVNM 347
F+ + + G+RP+ T +IL A A + V G ++ H + +DV VGNA+++M
Sbjct: 322 FRRLRLE-GMRPNSVTLITILNALAA-SGVDFGAARKFHGRIWESGYLRDVVVGNAIISM 379
Query: 348 YAKCGLISCSYKLFNEMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVT 406
YAKCG S ++ +F + + +V+SWNT++ A + + G + F M GI P+ V+
Sbjct: 380 YAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVS 439
Query: 407 FIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
FI +L AC+++ + G + + + T L+ + G+ G + EAE K+
Sbjct: 440 FIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEM 499
Query: 467 PLGQDPIV 474
PL +V
Sbjct: 500 PLPSRSLV 507
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/477 (27%), Positives = 229/477 (48%), Gaps = 31/477 (6%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
+A ++ + + +L+ G LH+ + + G+ D + N ++N+Y KCG A VF
Sbjct: 229 LAPNVITFITALGACTSLRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVF 288
Query: 61 DEMSER---NLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACA--G 112
M+ R +LVSW+AMIS +AG H A+ F ++ L PN + ++A A G
Sbjct: 289 KAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASG 348
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGE-AFEPNLVSFNA 171
+ ++ H + GY VGN++ISMY K G+ S A V+ ++ +++S+N
Sbjct: 349 VD-FGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNT 407
Query: 172 LIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK 231
++ + + K F ML G+ P++ SF L CS S L G +H L + +
Sbjct: 408 MLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRR 467
Query: 232 ---LESNPFVGNTIMALYSKFNLIGEAEKAFR--LIEEKDLISWNTFIAACSHCADYEKG 286
+ES+ V ++++Y K I EAE F+ + + L++WN + A + ++
Sbjct: 468 RDYVESS--VATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEA 525
Query: 287 LSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRL----NQDVGVGN 342
EM GV PD +F S+L++C + Q A ++RM + + +
Sbjct: 526 FGALMEMLQG-GVLPDALSFTSVLSSC-------YCSQ-EAQVLRMCILESGYRSACLET 576
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
AL++M+ +C + + +F+EM H +VVSW +++A A +R LF +M+ G+ P
Sbjct: 577 ALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIP 636
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
D T L C + + G+ ++ G+ DI L+++ G EA
Sbjct: 637 DKFTLATTLDTCLDSTTLGLGK-IIHACVTEIGLEADIAVENALLNMYSNCGDWREA 692
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 185/393 (47%), Gaps = 13/393 (3%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+ + + +C L KG++ H G F+GN LI+MY++ G +A ++ +
Sbjct: 28 YTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLM-LRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
E N+VS+ ALI+ ++ + F +F+ M L P+ ++ L C+ S DL G
Sbjct: 88 ERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147
Query: 222 ILHCLTVKCKLE----SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC 277
+H + + LE + VGN ++ +Y+K +A F I EKD++SW A
Sbjct: 148 SIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAY 207
Query: 278 SHCAD-YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
+ Y L +F+EM + P+ TF + L AC S++ G +H+ L L
Sbjct: 208 AQERRFYPDALRIFREMLL-QPLAPNVITFITALGAC---TSLRDGTWLHSLLHEAGLGF 263
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHR---NVVSWNTIIAAHANHRLGGSALKLFE 393
D GNAL+NMY KCG +Y +F M R ++VSWN +I+A G A+ +F
Sbjct: 264 DPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFR 323
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 453
+++ G++P+SVT I +L A +G+ F+ G D+ +I + +
Sbjct: 324 RLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKC 383
Query: 454 GKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRR 486
G A ++ D I T+L A R+
Sbjct: 384 GFFSAAWTVFRRIRWKCDVISWNTMLGASEDRK 416
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 70/136 (51%), Gaps = 5/136 (3%)
Query: 284 EKGLSVFKEMSNDHGVRPDDFT----FASILAACAGLASVQHGKQIHAHLIRMRLNQDVG 339
++GL + + S VR D + ++L +C + GK+ H + L Q +
Sbjct: 2 KRGLIIRQLCSLSGAVRVDRAADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLF 61
Query: 340 VGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-KAT 398
+GN L+NMY +CG + ++ +F++M RNVVSW +I+A+A A LF M +
Sbjct: 62 LGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLES 121
Query: 399 GIKPDSVTFIGLLTAC 414
P+S T + +L AC
Sbjct: 122 SAAPNSYTLVAMLNAC 137
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 186/587 (31%), Positives = 307/587 (52%), Gaps = 43/587 (7%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMI-LARKVFDEMSERNLVSWSAMISGHHQA 81
SL LK G + DV++ +LN+Y++ ++ A K F+ M ERN +WS MI+
Sbjct: 245 SLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHG 304
Query: 82 GEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGY--ASISFVGN 139
G A+ + + + S A I L + +I + F I N
Sbjct: 305 GRIDAAIAVYERDPV-------KSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWN 357
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
+LI+ YM+ G ++A ++ + N +S+ +IAG+ +N + E+ + + + R G+LP
Sbjct: 358 ALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLP 417
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
S CS L G +H L VK + N F N ++ +Y K + A + F
Sbjct: 418 SLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVF 477
Query: 260 RLIEEKDLISWNTFIAAC-------------------------------SHCADYEKGLS 288
+ KD++SWN+F+AA +H + +
Sbjct: 478 SRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMG 537
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMY 348
FK M +H + P+ +L C L + + G+QIH I++ ++ ++ V NAL++MY
Sbjct: 538 AFKTMFCEHEL-PNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMY 596
Query: 349 AKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
KCG S ++F+ M R++ +WNTII +A H LG A+K+++ M++ G+ P+ VTF+
Sbjct: 597 FKCGCAD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFV 655
Query: 409 GLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
GLL AC+HAGLV EG +F SM + YG++P EH+ C++DLLGR G + AE++ P+
Sbjct: 656 GLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPI 715
Query: 469 GQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGA 528
D ++ LL AC++ ++ IG+R A++LF ++P+ YV+LSN+Y+S GMWG+VA
Sbjct: 716 EPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEV 775
Query: 529 RKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
RK++K G+ KEP S +++ F + H +I EI L+ L
Sbjct: 776 RKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEEL 822
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 117/488 (23%), Positives = 226/488 (46%), Gaps = 56/488 (11%)
Query: 33 IQPDVIVSNHVLNLYAKCGKMILARKVFD------------------------------- 61
++ + + N +++ Y + G + +AR++FD
Sbjct: 123 LERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFE 182
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
+M ERNLVSW+ MISG+ + H A + F +MH LLP++ FASA+SA G+ +L
Sbjct: 183 KMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDV 242
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA-FEPNLVSFNALIAGFV 177
+ + +LK G+ +G +++++Y + D + + E+ E N +++ +IA
Sbjct: 243 LESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALS 302
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ + V++ + + R + GL C +D R + + P
Sbjct: 303 HGGRIDAAIAVYERDPVKSIAC-RTALITGLAQCGRIDDAR---------ILFEQIPEPI 352
Query: 238 V--GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
V N ++ Y + ++ EA++ F + ++ ISW IA + E+ L + +E+
Sbjct: 353 VVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHR 412
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
G+ P + SI AC+ + +++ G Q+H+ +++ + NAL+ MY KC +
Sbjct: 413 S-GMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNME 471
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ ++F+ M+ +++VSWN+ +AA + L A F+ M + D V++ +++A
Sbjct: 472 YARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAYA 527
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE-YTKKFPLGQDP-- 472
HA E F +M + + P+ T L+ + G G ++ +T LG D
Sbjct: 528 HAEQSNEAMGAFKTMFCEHEL-PNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSEL 586
Query: 473 IVLGTLLS 480
IV L+S
Sbjct: 587 IVANALIS 594
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 186/383 (48%), Gaps = 48/383 (12%)
Query: 43 VLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYI 102
+L+ Y + G+++ AR+VFD M ERN V+W+AMIS + Q G+ +A F M
Sbjct: 102 LLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAM-------- 153
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+ + ++ NS+++ Y DA ++ +
Sbjct: 154 ---------------PSRDVSSW-------------NSMLTGYCHSLQMVDARNLFEKMP 185
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
E NLVS+ +I+G+ + K +++F M R+GLLPD+ +FA L +L
Sbjct: 186 ERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLES 245
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSK-FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
L L +K E + +G I+ +YS+ +++ A K F + E++ +W+T IAA SH
Sbjct: 246 LRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGG 305
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
+ ++V++ R + A A GLA Q G+ A ++ ++ + + V
Sbjct: 306 RIDAAIAVYE--------RDPVKSIACRTALITGLA--QCGRIDDARILFEQIPEPIVVS 355
Query: 342 -NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGI 400
NAL+ Y + G+++ + +LF++M RN +SW +IA +A + AL L +++ +G+
Sbjct: 356 WNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGM 415
Query: 401 KPDSVTFIGLLTACNHAGLVKEG 423
P + + AC++ ++ G
Sbjct: 416 LPSLSSLTSIFFACSNIVALETG 438
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 140/310 (45%), Gaps = 37/310 (11%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKV---- 59
S++S+ CS AL+ G +H+ +K+G Q + N ++ +Y KC M AR+V
Sbjct: 421 SLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRM 480
Query: 60 ---------------------------FDEMSERNLVSWSAMISGHHQAGEHLLALEFFS 92
FD M R+ VSW+ +IS + A + A+ F
Sbjct: 481 VTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFK 540
Query: 93 QM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
M H LPN I + C + + GQQIH ++K G S V N+LISMY K G
Sbjct: 541 TMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG 600
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
+D+ ++ E ++ ++N +I G+ ++ + ++++ M G+LP+ +F G L
Sbjct: 601 -CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLN 659
Query: 210 ICSVSNDLRKGM-ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK-AFRLIEEKDL 267
CS + + +G ++ L P ++ L + + AE+ + + E D
Sbjct: 660 ACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDT 719
Query: 268 ISWNTFIAAC 277
+ W+ + AC
Sbjct: 720 VIWSALLGAC 729
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 185/521 (35%), Positives = 288/521 (55%), Gaps = 5/521 (0%)
Query: 51 GKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAI 107
G + A K F E+SE +++ W+A+I G+ Q + + M + PN + F +
Sbjct: 33 GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 92
Query: 108 SACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLV 167
AC G G+QIH + K+G+ S FV NSL+SMY K G S A +V+ + + +V
Sbjct: 93 KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVV 152
Query: 168 SFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLT 227
S+ ++I+G+V+N P + VFK M + + PD + + + DL +G +H L
Sbjct: 153 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLV 212
Query: 228 VKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGL 287
K LE P + ++ +Y+K L+ A F +E+ +LI WN I+ ++ E+ +
Sbjct: 213 TKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAI 272
Query: 288 SVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNM 347
+F+EM + +R D T S + A A + S++ + + ++ + D V L++M
Sbjct: 273 KLFREMITKN-IRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDM 331
Query: 348 YAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTF 407
YAKCG I + +F+ + ++VV W+ +I + H G A+ L+ +MK G+ P+ TF
Sbjct: 332 YAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTF 391
Query: 408 IGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
IGLLTAC ++GLVKEG F+ M +GI P +H++C++DLLGRAG L +A ++ P
Sbjct: 392 IGLLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMP 450
Query: 468 LGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAG 527
+ V G LLSAC++ R V +GE A+QLF L P T YV LSNLYAS +W VA
Sbjct: 451 IKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVAN 510
Query: 528 ARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
R M+ GL K+ +S IE+ G E F V + SH K EI
Sbjct: 511 VRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEI 551
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 182/386 (47%), Gaps = 17/386 (4%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L C T G +H K G +V V N ++++YAK G++ AR VFD++ +R
Sbjct: 91 VLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRT 150
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
+VSW+++ISG+ Q G+ + AL F +M ++ P+ S ++A ++ L +G+ IH
Sbjct: 151 VVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHG 210
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
K G + SL +MY K G A + +PNL+ +NA+I+G+ N E+
Sbjct: 211 LVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEE 270
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
++F+ M+ + + D + + + L L K + + FV ++
Sbjct: 271 AIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLID 330
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y+K I A F + +KD++ W+ I ++ + ++ EM GV P+D
Sbjct: 331 MYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQA-GVCPNDG 389
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG------NALVNMYAKCGLISCSY 358
TF +L AC V+ G ++ L D G+ + +V++ + G ++ +Y
Sbjct: 390 TFIGLLTACKNSGLVKEGWEL------FHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAY 443
Query: 359 KLFNEMLHRNVVS-WNTIIAAHANHR 383
M + VS W +++A HR
Sbjct: 444 DFIMSMPIKPGVSVWGALLSACKIHR 469
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 163/344 (47%), Gaps = 8/344 (2%)
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
Q++ + G F+ I+ + G + A + E EP+++ +NA+I G+ +
Sbjct: 4 DQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQK 63
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ ++ M + P+ F+F L+ C ++ G +H T K SN FV
Sbjct: 64 NIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQ 123
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N+++++Y+KF I A F + ++ ++SW + I+ D + L+VFKEM + V
Sbjct: 124 NSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCN-V 182
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+PD S++ A + + GK IH + ++ L + + +L MYAK GL+ +
Sbjct: 183 KPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARF 242
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG- 418
FN M N++ WN +I+ +AN+ G A+KLF +M I+ DS+T + A G
Sbjct: 243 FFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGS 302
Query: 419 --LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
L + + Y + E D T LID+ + G + A
Sbjct: 303 LELARWLDGYISKSE----YRDDTFVNTGLIDMYAKCGSIYLAR 342
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 138/280 (49%), Gaps = 8/280 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQ--PDVIVSNHVLNLYAKCGKMILARKVFD 61
++ S++ + + L QG S+H V K+G++ PD+++S + +YAK G + +AR F+
Sbjct: 188 ALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVIS--LTTMYAKRGLVEVARFFFN 245
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
M + NL+ W+AMISG+ G A++ F +M ++ + SA+ A A + SL
Sbjct: 246 RMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLEL 305
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+ + Y K Y +FV LI MY K G A V+ + ++V ++ +I G+
Sbjct: 306 ARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGL 365
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ ++ ++ M + G+ P+ +F G L C S +++G L L +E +
Sbjct: 366 HGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQH 425
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLIS-WNTFIAAC 277
+ ++ L + + +A + K +S W ++AC
Sbjct: 426 YSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSAC 465
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/137 (19%), Positives = 64/137 (46%), Gaps = 1/137 (0%)
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
+H Q++ LI L++ + +N G ++ ++K F E+ +++ WN II +
Sbjct: 1 KHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGY 60
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
+ + ++++ M+ + + P+ TF+ +L AC + G+ K YG +
Sbjct: 61 TQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFK-YGFGSN 119
Query: 440 IEHFTCLIDLLGRAGKL 456
+ L+ + + G++
Sbjct: 120 VFVQNSLVSMYAKFGQI 136
>gi|302784186|ref|XP_002973865.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
gi|300158197|gb|EFJ24820.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
Length = 616
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 172/537 (32%), Positives = 305/537 (56%), Gaps = 8/537 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +LL C + L G +H V+K G +V V NH++ +Y+KCG + A+KVFD
Sbjct: 70 APAYGNLLRDCGE---LAAGKKIHEHVVKNGYYENVYVGNHLVQMYSKCGSLEDAKKVFD 126
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACA--GIQSLVKG 119
M R+ +SWS MI+G+ + G A++ + M + P+ + F++ ++AC+ G ++L G
Sbjct: 127 GMRRRDSISWSKMIAGYVRHGLAREAIKLYKAMAIDPDGFTFSAVLNACSSLGPRALEVG 186
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
++IHA+ + FV ++L++M+ K G ++ V+ + +++ +N++I + ++
Sbjct: 187 KEIHAHMKRIWLKPDVFVDSALVTMFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQS 246
Query: 180 QQPEKGFEVFKLMLRQG--LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
P + E+FK M + P+ ++ L CS DL +G +H V + +
Sbjct: 247 GHPREAIELFKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFDAA 306
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
N+++ +Y+K I EA + F ++++ ++SW I+A + L ++++M ++
Sbjct: 307 AENSLVNMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSE- 365
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
GV P+ TFAS+L+AC+ L +++ GK +HA + D+ V NALV++Y KCG + +
Sbjct: 366 GVEPNGITFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSA 425
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
K+F+ M RNVVSW +I+A+A+HR A++L++ M G++ S + +LTAC+ A
Sbjct: 426 RKVFDRMKIRNVVSWTAMISAYAHHRHSEEAIQLYKAMDLEGVQASSFIYGTVLTACSQA 485
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GL++ YF + + G +E + C+ +LGRAG+L EAEE P + +
Sbjct: 486 GLLESARHYFGCLTRDCGAPAKLEDYVCMATVLGRAGRLAEAEELLAVMPFEAEFVAWMG 545
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKD 534
LL+AC+ DV G R+A+ LF L+P +PYVLLSN+Y + G + A R+ + D
Sbjct: 546 LLAACKAHNDVERGARVAEVLFRLEPLNEAPYVLLSNIYVAAGRQEEAARVRRKMGD 602
>gi|449463559|ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
gi|449511944|ref|XP_004164096.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 566
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 186/552 (33%), Positives = 310/552 (56%), Gaps = 20/552 (3%)
Query: 35 PDVIVSNHVLNLYAKCGKMILARKVF-DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQ 93
P I S ++N+Y++C +M A VF D ERN+ +++A+I+G G +F+ +
Sbjct: 10 PSSITS--LINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAADGFQFYKR 67
Query: 94 MH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGY 150
M ++P+++ F + AC ++ ++IH K G FVG++L++ Y+KV
Sbjct: 68 MRSVGVMPDKFTFPCVVRACC---EFMEVRKIHGCLFKMGLELNVFVGSALVNTYLKVDG 124
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
+ DA V+ E E ++V +NA+I G+ + K VFK M +G+ RF+ L I
Sbjct: 125 TEDAEKVFEELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFTTTSILSI 184
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
+ D+ G +H + K S V N ++ +Y K +A F +I EKDL SW
Sbjct: 185 LTSMGDINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKDLFSW 244
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
N+ I+A C D++ L +F +M V PD T ++L AC+ LA++ HG++IH ++I
Sbjct: 245 NSIISAHEQCDDHDGTLRLFGKMLGSR-VLPDVITITAVLPACSHLAALMHGREIHGYMI 303
Query: 331 RMRLNQ-----DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
L + DV + NA+++MYAKCG + + +F+ M +++V SWN +I +A H G
Sbjct: 304 VNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMHGYG 363
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
AL +F +M IKPD VTF+G+L+AC+HAG V +G ++ ME +G+ P IEH+TC
Sbjct: 364 TEALDMFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQGRSFLTRMELEFGVIPTIEHYTC 423
Query: 446 LIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQP-- 503
+ID+LGRAG L EA + ++ PL + I+ LL ACRL + +G + +++ L+P
Sbjct: 424 IIDMLGRAGHLGEAYDLAQRIPLEDNLILWMALLGACRLHGNAELGNVVGEKITQLEPKH 483
Query: 504 TTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHS 563
+ Y+L+S+LY G + + R+ +K+ +KK P S IE++ F++ + +H
Sbjct: 484 CGSGSYILMSSLYGVVGRYEEALEVRRTMKEQNVKKTPGCSWIELKDGLYVFSMGDRTHH 543
Query: 564 KIGEINYMLKTL 575
E+N ++ L
Sbjct: 544 ---ELNALINCL 552
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 184/391 (47%), Gaps = 24/391 (6%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+H + KMG++ +V V + ++N Y K A KVF+E+ ER++V W+AMI+G+ + G
Sbjct: 96 IHGCLFKMGLELNVFVGSALVNTYLKVDGTEDAEKVFEELPERDVVLWNAMINGYTKIGH 155
Query: 84 HLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
A+ F +M + + + S +S + + G+ IH K GY+S V N+
Sbjct: 156 LNKAVVVFKRMGEEGISLSRFTTTSILSILTSMGDINNGRAIHGIVTKMGYSSCVAVSNA 215
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
LI MY K ++ DAL+++ E +L S+N++I+ + + +F ML +LPD
Sbjct: 216 LIDMYGKCKHTEDALMIFEMINEKDLFSWNSIISAHEQCDDHDGTLRLFGKMLGSRVLPD 275
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP-----FVGNTIMALYSKFNLIGEA 255
+ L CS L G +H + L N + N IM +Y+K + A
Sbjct: 276 VITITAVLPACSHLAALMHGREIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNA 335
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
+ F L+ KD+ SWN I + + L +F M ++PD TF +L+AC+
Sbjct: 336 DIIFDLMRNKDVASWNIMIMGYAMHGYGTEALDMFHRMCEAQ-IKPDVVTFVGVLSACSH 394
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGV------GNALVNMYAKCGLISCSYKLFNEM-LHRN 368
V G+ L RM L + GV +++M + G + +Y L + L N
Sbjct: 395 AGFVHQGRSF---LTRMEL--EFGVIPTIEHYTCIIDMLGRAGHLGEAYDLAQRIPLEDN 449
Query: 369 VVSWNTIIAA---HANHRLGGSALKLFEQMK 396
++ W ++ A H N LG + Q++
Sbjct: 450 LILWMALLGACRLHGNAELGNVVGEKITQLE 480
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 149/304 (49%), Gaps = 16/304 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L + + G ++H V KMG V VSN ++++Y KC A +F+ +
Sbjct: 177 TTTSILSILTSMGDINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMI 236
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+E++L SW+++IS H Q +H L F +M +LP+ + + AC+ + +L+ G+
Sbjct: 237 NEKDLFSWNSIISAHEQCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHLAALMHGR 296
Query: 121 QIHAYSLKFGYASIS-----FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
+IH Y + G + N+++ MY K G +A +++ ++ S+N +I G
Sbjct: 297 EIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMG 356
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+ + + ++F M + PD +F G L CS + + +G + +LE
Sbjct: 357 YAMHGYGTEALDMFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQG---RSFLTRMELEFG 413
Query: 236 --PFVGN--TIMALYSKFNLIGEA-EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVF 290
P + + I+ + + +GEA + A R+ E +LI W + AC + E G V
Sbjct: 414 VIPTIEHYTCIIDMLGRAGHLGEAYDLAQRIPLEDNLILWMALLGACRLHGNAELGNVVG 473
Query: 291 KEMS 294
++++
Sbjct: 474 EKIT 477
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 178/524 (33%), Positives = 283/524 (54%), Gaps = 11/524 (2%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAG 112
A KVFD++ E N W+AM G+ Q H + F QM ++PN + F + +C
Sbjct: 4 AHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCVK 63
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
I +L +G+++H + +K G+ + FV +LI MY G A V+GE E N++++ A+
Sbjct: 64 INALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTAM 123
Query: 173 IAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
I G++ +F L + ++ +G +E V +R + + K
Sbjct: 124 INGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDV---IRARELFDKMPNK--- 177
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
+ NT++ Y+ + E+ F + E+++ SWN I + + + LS FK
Sbjct: 178 --DVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKR 235
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
M D V P+D T ++L+ACA L ++ GK +H + +V V NAL++MYAKCG
Sbjct: 236 MLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCG 295
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
++ + +F M +++++SWNTII A H G AL LF MK G PD +TFIG+L
Sbjct: 296 VVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILC 355
Query: 413 ACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDP 472
AC H GLV++G +YF SM Y I P IEH+ C++DLLGRAG L A ++ +K P+ D
Sbjct: 356 ACTHMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADA 415
Query: 473 IVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKML 532
++ LL ACR+ ++V + E ++L +P + YV+LSN+Y G W DVA + +
Sbjct: 416 VIWAALLGACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKVAM 475
Query: 533 KDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
+D+G KK P S+IEV +F + H + +I L+TL+
Sbjct: 476 RDTGFKKLPGCSLIEVNDYLVEFYSLDERHPEKEQIYGTLRTLT 519
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 155/321 (48%), Gaps = 17/321 (5%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L C K AL++G +H V+K G + + V+ ++++YA G + A +VF EM ERN
Sbjct: 57 ILKSCVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERN 116
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYI--FASAISACAGIQSLVKGQQIHAY 125
+++W+AMI+G+ + + A F L P I + + IS + +++ +++
Sbjct: 117 VIAWTAMINGYITCCDLVTARRLFD---LAPERDIVLWNTMISGYIEAKDVIRARELFDK 173
Query: 126 SLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKG 185
S N++++ Y G ++ E E N+ S+NALI G+ N +
Sbjct: 174 MPNKDVMS----WNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEV 229
Query: 186 FEVFKLMLRQG-LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
FK ML G ++P+ + L C+ L G +H + N +V N +M
Sbjct: 230 LSAFKRMLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMD 289
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFI---AACSHCADYEKGLSVFKEMSNDHGVRP 301
+Y+K ++ A F+ ++ KDLISWNT I A H AD L++F M G P
Sbjct: 290 MYAKCGVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGAD---ALNLFSHMK-IAGENP 345
Query: 302 DDFTFASILAACAGLASVQHG 322
D TF IL AC + V+ G
Sbjct: 346 DGITFIGILCACTHMGLVEDG 366
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L C++ AL G +H G + +V V N ++++YAKCG + A VF M
Sbjct: 248 TLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSM 307
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACA 111
++L+SW+ +I G G AL FS M + P+ F + AC
Sbjct: 308 DNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACT 358
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 190/536 (35%), Positives = 292/536 (54%), Gaps = 37/536 (6%)
Query: 43 VLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGH---HQAGEHLLALEFFSQMHLLPN 99
++ YA CG+ R +FDE+ ++N+V ++ MI + H + LL + + + P+
Sbjct: 1066 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 1125
Query: 100 EYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG 159
Y + + A +G + L G QIHA ++ G FVGN LISMY K G +A V
Sbjct: 1126 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLD 1185
Query: 160 EAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRK 219
Z ++VS+N+L+AG N Q + EV K M GL PD + A
Sbjct: 1186 ZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMAS------------- 1232
Query: 220 GMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSH 279
+L +T C L++ FV M L +K L+SWN IA +
Sbjct: 1233 --LLPAVTNTC-LDNVSFVKEMFMKLANK-----------------SLVSWNVMIAVYMN 1272
Query: 280 CADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG 339
+ + + +F +M DH V PD + AS+L AC L+++ G++IH +++R RL ++
Sbjct: 1273 NSMPAEAVDIFLQM-EDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLL 1331
Query: 340 VGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG 399
+ NAL++MYAKCG + + ++F++M R+VVSW ++I+A+ + G A+ LF +M+ G
Sbjct: 1332 LENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLG 1391
Query: 400 IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+ PDS+ F+ +L+AC+HAGL+ EG YF M + I P IEHF C++DLLGRAG++ EA
Sbjct: 1392 LNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEA 1451
Query: 460 EEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASD 519
+ K+ P+ + V G LLSACR+ +++IG A QLF L P + YVLLSN+YA
Sbjct: 1452 YGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKA 1511
Query: 520 GMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
G W DV R ++K G+KK P S E+ F + SH + +I L L
Sbjct: 1512 GRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVL 1567
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 202/456 (44%), Gaps = 68/456 (14%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L S ++ L G+ +HAAV+++G+ +V V N ++++Y KCG ++ A +V DZM R+
Sbjct: 1132 VLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRD 1191
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHA 124
+VSW+++++G + G+ ALE +M LL P+ AS + A
Sbjct: 1192 VVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNT----------- 1240
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
++SFV M+MK+ S LVS+N +IA ++ N P +
Sbjct: 1241 -----CLDNVSFVKE----MFMKLANKS-------------LVSWNVMIAVYMNNSMPAE 1278
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
++F M + PD S A L C + L G +H V+ +L+ N + N ++
Sbjct: 1279 AVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALID 1338
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y+K + A + F ++ +D++SW + I+A +S+F M D G+ PD
Sbjct: 1339 MYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRM-QDLGLNPDSI 1397
Query: 305 TFASILAACAGLASVQHGKQIHAHL-----IRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
F S+L+AC+ + G+ + I R+ V +V++ + G + +Y
Sbjct: 1398 AFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFV----CMVDLLGRAGQVDEAYG 1453
Query: 360 LFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+M + N W ++ SA +++ M IGLL A
Sbjct: 1454 FIKQMPMEPNERVWGALL----------SACRVYSNM-----------IIGLLAADQLFQ 1492
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
L E Y+ + Y + E T + ++ G
Sbjct: 1493 LCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKG 1528
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 160/345 (46%), Gaps = 36/345 (10%)
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
+G L+ Y G ++ E + N+V FN +I +V N VFK M G
Sbjct: 1062 LGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHG 1121
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
+ PD +++ L+ S S DL GM +H V+ L+ N FVGN ++++Y K + EA
Sbjct: 1122 IDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEAC 1181
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
+ + +D++SWN+ +A C+ ++ L V KEM G++PD T AS+L A
Sbjct: 1182 RVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMEL-LGLKPDAGTMASLLPA---- 1236
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
V N ++ +S ++F ++ ++++VSWN +I
Sbjct: 1237 -----------------------VTNTCLDN------VSFVKEMFMKLANKSLVSWNVMI 1267
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
A + N+ + A+ +F QM+ + PD+++ +L AC + G + + +
Sbjct: 1268 AVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKR-L 1326
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
P++ LID+ + G L A E + +D + +++SA
Sbjct: 1327 QPNLLLENALIDMYAKCGCLEYAREVFDQMKF-RDVVSWTSMISA 1370
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 76/122 (62%), Gaps = 3/122 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A SI+S+L C AL G +H V++ +QP++++ N ++++YAKCG + AR+VFD
Sbjct: 1295 AISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFD 1354
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVK 118
+M R++VSW++MIS + G+ A+ FS+M L P+ F S +SAC+ L +
Sbjct: 1355 QMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDE 1414
Query: 119 GQ 120
G+
Sbjct: 1415 GR 1416
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 86/167 (51%), Gaps = 3/167 (1%)
Query: 317 ASVQHGKQIHAHL-IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
+++ K++H+ + I L+ + +G L+ YA CG + +F+E+ +NVV +N +
Sbjct: 1038 PDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVM 1097
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYG 435
I ++ N+ L AL +F+ M GI PD T+ +L A + + + G ++ + G
Sbjct: 1098 IRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRV-G 1156
Query: 436 ISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
+ ++ LI + G+ G L+EA + P +D + +L++ C
Sbjct: 1157 LDLNVFVGNGLISMYGKCGCLVEACRVLDZMPC-RDVVSWNSLVAGC 1202
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 183/584 (31%), Positives = 319/584 (54%), Gaps = 15/584 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L C++ + + G +H +K+ + +++++N ++++Y+KCG + A+ +F
Sbjct: 649 TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN 708
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM-----HLLPNEYIFASAISACAGIQSLVK 118
+ +N+VSW+ M+ G G+ + QM + +E +A+ C L
Sbjct: 709 NNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPS 768
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+++H YSLK + V N+ ++ Y K G S A V+ + S+NALI G +
Sbjct: 769 LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 828
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ P + M GLLPD F+ L CS LR G +H ++ LE + FV
Sbjct: 829 SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 888
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++++LY + + F +E+K L+SWNT I ++ L VF++M +G
Sbjct: 889 YLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVL-YG 947
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
++ + + AC+ L S++ G++ HA+ ++ L D + +L++MYAK G I+ S
Sbjct: 948 IQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSS 1007
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
K+FN + ++ SWN +I + H L A+KLFE+M+ TG PD +TF+G+LTACNH+G
Sbjct: 1008 KVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSG 1067
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL-----LEAEEYTKKFPLGQDPI 473
L+ EG Y + M+ ++G+ P+++H+ C+ID+LGRAG+L + AEE +++ +G
Sbjct: 1068 LIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVG---- 1123
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
+ +LLS+CR+ +++ +GE++A +LF L+P YVLLSNLYA G W DV R+ +
Sbjct: 1124 IWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMN 1183
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
+ L+K+ S IE+ F V E EI + L +
Sbjct: 1184 EMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEM 1227
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/418 (29%), Positives = 211/418 (50%), Gaps = 10/418 (2%)
Query: 8 LLHHCSKTKALQQGISLHAAVL-KMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
LL K K ++ G +H V ++ D ++ ++ +YA CG +R VFD + +
Sbjct: 445 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 504
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQI 122
NL W+A+IS + + + LE F +M LLP+ + + I ACAG+ + G +
Sbjct: 505 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 564
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H +K G FVGN+L+S Y G+ +DAL ++ E NLVS+N++I F +N
Sbjct: 565 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 624
Query: 183 EKGFEVFKLMLRQ----GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
E+ F + M+ + +PD + L +C+ ++ G +H VK +L+ +
Sbjct: 625 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 684
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM-SNDH 297
N +M +YSK I A+ F++ K+++SWNT + S D V ++M +
Sbjct: 685 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 744
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
V+ D+ T + + C + + K++H + ++ + V NA V YAKCG +S +
Sbjct: 745 DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYA 804
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
++F+ + + V SWN +I HA +L QMK +G+ PDS T LL+AC+
Sbjct: 805 QRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 862
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 149/282 (52%), Gaps = 6/282 (2%)
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ-GLLP 199
+I+MY G D+ V+ NL +NA+I+ + N+ ++ E F M+ LLP
Sbjct: 481 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 540
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
D F++ ++ C+ +D+ G+ +H L VK L + FVGN +++ Y + +A + F
Sbjct: 541 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 600
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG---VRPDDFTFASILAACAGL 316
++ E++L+SWN+ I S E+ + EM ++G PD T ++L CA
Sbjct: 601 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 660
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
+ GK +H +++RL++++ + NAL++MY+KCG I+ + +F ++NVVSWNT++
Sbjct: 661 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 720
Query: 377 AAHANHRLGGSALKLFEQMKATG--IKPDSVTFIGLLTACNH 416
+ + QM A G +K D VT + + C H
Sbjct: 721 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 762
>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 755
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 190/578 (32%), Positives = 311/578 (53%), Gaps = 13/578 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ SLL S+ +Q LH + G D+ +SN +LN+Y KCG + +RK+FD M
Sbjct: 164 TVLSLLFGVSELAHVQ---CLHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYM 220
Query: 64 SERNLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
R+LVSW+++IS + Q G E LL L+ F S +S A L G+
Sbjct: 221 DHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGR 280
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H L+ G+ + V SLI +Y+K G A ++ + + ++V + A+I+G V+N
Sbjct: 281 CLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNG 340
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+K VF+ ML+ G+ P + A + C+ G + ++ +L + N
Sbjct: 341 SADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSILGYILRQELPLDVATQN 400
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +Y+K + ++ F ++ +DL+SWN + + + L +F EM +D+
Sbjct: 401 SLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQT- 459
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD T S+L CA + GK IH+ +IR L + V +LV+MY KCG + + +
Sbjct: 460 PDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRC 519
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN+M ++VSW+ II + H G +AL+ + + +G+KP+ V F+ +L++C+H GLV
Sbjct: 520 FNQMPSHDLVSWSAIIVGYGYHGKGEAALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLV 579
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE-YTKKFPLGQDPI--VLGT 477
++G + SM K +GI+PD+EH C++DLL RAG++ EA Y KKFP DP+ VLG
Sbjct: 580 EQGLNIYESMTKDFGIAPDLEHHACVVDLLSRAGRVEEAYNVYKKKFP---DPVLDVLGI 636
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
+L ACR + +G+ +A + L+P +V L++ YAS W +V A ++ GL
Sbjct: 637 ILDACRANGNNELGDTIANDILMLRPMDAGNFVQLAHCYASINKWEEVGEAWTYMRSLGL 696
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KK P +S I++ GT F SH + EI LK L
Sbjct: 697 KKIPGWSFIDIHGTITTFFTDHNSHPQFQEIVCTLKIL 734
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 139/469 (29%), Positives = 235/469 (50%), Gaps = 8/469 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + SLL CS G++LH +L G+ D +++ ++N YAK G +ARKVFD
Sbjct: 61 AYTFPSLLKACSFLNLFSLGLTLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFD 120
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQ 121
M ERN+V W+ +I + + G A F +M + + +S G+ L Q
Sbjct: 121 YMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTVLSLLFGVSELAHVQC 180
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H ++ +G+ S + NS++++Y K G + ++ +LVS+N+LI+ + +
Sbjct: 181 LHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGN 240
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ + K M QG +F L + + +L+ G LH ++ + V +
Sbjct: 241 ICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETS 300
Query: 242 IMALYSKFNLIGEAEKAFRLIE---EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++ +Y K G+ + AFR+ E +KD++ W I+ +K L+VF++M G
Sbjct: 301 LIVVYLKG---GKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLK-FG 356
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
V+P T AS++ ACA L S G I +++R L DV N+LV MYAKCG + S
Sbjct: 357 VKPSTATMASVITACAQLGSYNLGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSS 416
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+F+ M R++VSWN ++ +A + AL LF +M++ PDS+T + LL C G
Sbjct: 417 IVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTG 476
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+ G+ + +S G+ P I T L+D+ + G L A+ + P
Sbjct: 477 QLHLGK-WIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMP 524
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 166/352 (47%), Gaps = 7/352 (1%)
Query: 70 SWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYS 126
S +A I+ H G H L ++ M H+ + Y F S + AC+ + G +H
Sbjct: 28 SVNATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRI 87
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
L G + +++ +SLI+ Y K G++ A V+ E N+V + +I + + + F
Sbjct: 88 LVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAF 147
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
+F M RQG+ P + L + ++L LH + S+ + N+++ +Y
Sbjct: 148 SLFDEMRRQGIQPSSVTV---LSLLFGVSELAHVQCLHGCAILYGFMSDINLSNSMLNVY 204
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
K I + K F ++ +DL+SWN+ I+A + + + L + K M G TF
Sbjct: 205 GKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTM-RLQGFEAGPQTF 263
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
S+L+ A ++ G+ +H ++R D V +L+ +Y K G I ++++F
Sbjct: 264 GSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSD 323
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
++VV W +I+ + AL +F QM G+KP + T ++TAC G
Sbjct: 324 KDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLG 375
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 134/289 (46%), Gaps = 5/289 (1%)
Query: 168 SFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLT 227
S NA I + + ML+ + D ++F L+ CS N G+ LH
Sbjct: 28 SVNATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRI 87
Query: 228 VKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGL 287
+ L + ++ ++++ Y+KF A K F + E++++ W T I S +
Sbjct: 88 LVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAF 147
Query: 288 SVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNM 347
S+F EM G++P T S+L + LA VQ +H I D+ + N+++N+
Sbjct: 148 SLFDEMRR-QGIQPSSVTVLSLLFGVSELAHVQ---CLHGCAILYGFMSDINLSNSMLNV 203
Query: 348 YAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTF 407
Y KCG I S KLF+ M HR++VSWN++I+A+A L L + M+ G + TF
Sbjct: 204 YGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTF 263
Query: 408 IGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+L+ G +K G + + G D T LI + + GK+
Sbjct: 264 GSVLSVAASRGELKLGRCLHGQILRA-GFYLDAHVETSLIVVYLKGGKI 311
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 89/180 (49%), Gaps = 9/180 (5%)
Query: 287 LSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVN 346
L+ + M H V D +TF S+L AC+ L G +H ++ L+ D + ++L+N
Sbjct: 46 LATYASMLKTH-VPSDAYTFPSLLKACSFLNLFSLGLTLHQRILVSGLSLDAYIASSLIN 104
Query: 347 MYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVT 406
YAK G + K+F+ M RNVV W TII ++ A LF++M+ GI+P SVT
Sbjct: 105 FYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVT 164
Query: 407 FIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
+ LL + V+ + YG DI ++++ G+ G + EY++K
Sbjct: 165 VLSLLFGVSELAHVQ----CLHGCAILYGFMSDINLSNSMLNVYGKCGNI----EYSRKL 216
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 186/572 (32%), Positives = 318/572 (55%), Gaps = 8/572 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++S LL C L+ G +H +K G++ ++ + N +L++Y+ G+ A +F M
Sbjct: 263 TLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRM 322
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNE--YI-FASAISACAGIQSLVKGQ 120
ER+L+SW++M++ + Q G L AL+ F++M + E Y+ F SA++AC + G+
Sbjct: 323 PERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGK 382
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H + + G +GN+LI+ Y K ++A V+ + + V++NALI GF N
Sbjct: 383 ILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNA 442
Query: 181 QPEKGFEVFKLMLRQGLLP--DRFSFAGGLEICSVSNDLRK-GMILHCLTVKCKLESNPF 237
+ + FKLM R+G D + L C DL K G+ +H TV + +
Sbjct: 443 ELNEAVAAFKLM-REGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQH 501
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V ++++ +Y+K + + F + K WN IAA + E+ L + M +
Sbjct: 502 VQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSA- 560
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G+ D F F++ L+ A LA ++ G+Q+H I++ D + NA ++MY KCG + +
Sbjct: 561 GIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDA 620
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++ + R+ +SWNT+I+ A H A + F M G+KP+ V+F+ LL+AC+H
Sbjct: 621 LRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHG 680
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV EG AY+ SM YGI P IEH C+IDLLGR+G+L+EAE + + P+ + +V +
Sbjct: 681 GLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDLVWRS 740
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL++CR+ R++ +G + AK L L P+ S YVL SN++A+ G W DV R + +
Sbjct: 741 LLASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFATIGRWEDVEDVRGQMGAHKI 800
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEIN 569
+K+P++S ++ +G F + + +H ++ +IN
Sbjct: 801 QKKPAHSWVKWKGNISIFGMGDQTHPQMEQIN 832
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/484 (27%), Positives = 246/484 (50%), Gaps = 10/484 (2%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+I+ ++ C + G L LK G++ V +N ++ ++ CG + A +F+E
Sbjct: 161 NNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNE 220
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFAS---AISACAGIQSLVKG 119
M+ER+ +SW+++IS + Q H + +F M L+ E + + +S C + L G
Sbjct: 221 MNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWG 280
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ +H ++K+G S + N+L+S+Y G S DA L++ E +L+S+N+++A +V++
Sbjct: 281 KGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQD 340
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ +VF ML + +F L C G ILH V L+ +G
Sbjct: 341 GRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIG 400
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
NT++ Y K + + EA+K F+ + + D ++WN I ++ A+ + ++ FK M
Sbjct: 401 NTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTS 460
Query: 300 RPDDFTFASILAACAGLAS-VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
D T +IL +C +++G IHAH + + D V ++L+ MYAKCG + S
Sbjct: 461 GVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSS 520
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+F++++ + WN IIAA+A + G ALKL +M++ GI+ D F L+
Sbjct: 521 YIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLA 580
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHF--TCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
+++EG+ S T + +++HF +D+ G+ G+L +A + P + +
Sbjct: 581 MLEEGQQLHGS---TIKLGFELDHFIINAAMDMYGKCGELDDALRILPQ-PTDRSRLSWN 636
Query: 477 TLLS 480
TL+S
Sbjct: 637 TLIS 640
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 128/427 (29%), Positives = 218/427 (51%), Gaps = 11/427 (2%)
Query: 5 ISSLLHHCSKTKAL-QQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
I+SL+ C+K+ + ++G H +K G+ DV V ++ YA G + A+K+F+EM
Sbjct: 61 IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+RN+VSW++++ + G + + +M + NE A IS+C + ++ G
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+ ++LKFG + NSLI M+ G ++A ++ E E + +S+N++I+ +N
Sbjct: 181 QLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNT 240
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E+ F F M + + + L IC + L+ G +H L VK LESN + N
Sbjct: 241 LHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCN 300
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
T++++YS +AE FR + E+DLISWN+ +A L VF EM
Sbjct: 301 TLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLW-MKKE 359
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ TF S LAAC +GK +H ++ + L ++ +GN L+ Y KC ++ + K+
Sbjct: 360 INYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKV 419
Query: 361 FNEMLHRNVVSWNTIIAAHANH---RLGGSALKLFEQMKATGIKPDSVTFIGLLTAC-NH 416
F M + V+WN +I AN+ +A KL + +G+ D +T + +L +C H
Sbjct: 420 FQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGV--DYITIVNILGSCLTH 477
Query: 417 AGLVKEG 423
L+K G
Sbjct: 478 EDLIKYG 484
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/479 (25%), Positives = 230/479 (48%), Gaps = 12/479 (2%)
Query: 46 LYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYI 102
+Y+K G++ A+ VFD MSERN SW+ M+SG+ + G ++ A+ FF + + P+ ++
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60
Query: 103 FASAISACAGIQSLVK-GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA 161
AS ++AC + K G Q H +++K G FVG S + Y G S+A ++ E
Sbjct: 61 IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
+ N+VS+ +L+ + +N ++ +K M +G+ + + A + C D+ G
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
L +K LE+ N+++ ++ I EA F + E+D ISWN+ I+A +
Sbjct: 181 QLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNT 240
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASI-LAACAGLASVQHGKQIHAHLIRMRLNQDVGV 340
+E+ F M H ++T SI L+ C + ++ GK +H ++ L ++ +
Sbjct: 241 LHEESFRYFHWMRLVH--EEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICL 298
Query: 341 GNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGI 400
N L+++Y+ G + +F M R+++SWN+++A + ALK+F +M
Sbjct: 299 CNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKK 358
Query: 401 KPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
+ + VTF L AC G+ + G+ ++ LI G+ K+ EA+
Sbjct: 359 EINYVTFTSALAACLDPEFFTNGKI-LHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAK 417
Query: 461 EYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAK-QLFHLQPTTTSPYVLLSNLYAS 518
+ ++ P D + L+ + + E +A +L T+ Y+ + N+ S
Sbjct: 418 KVFQRMP-KLDKVTWNALIGG--FANNAELNEAVAAFKLMREGSTSGVDYITIVNILGS 473
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 187/553 (33%), Positives = 300/553 (54%), Gaps = 41/553 (7%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAG 112
A VFD + E NL+ W+ M GH + + + AL+ + M LLP+ Y F + +CA
Sbjct: 42 AISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAK 101
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG------------- 159
+ +GQQIH + LK G+ +V SLISMY + G DA V+
Sbjct: 102 SKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTAL 161
Query: 160 ------------------EAFEPNLVSFNALIAGFVENQQPEKGFEVFK-LMLRQGLLPD 200
E ++VS+NA+I+G+VE ++ E+FK +M+ + PD
Sbjct: 162 IAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPD 221
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+ + C+ S+ + G +H SN + N ++ LYSKF + A + F
Sbjct: 222 ESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFD 281
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ KD+ISWNT I +H Y++ L +F+EM G P+D T SIL ACA L ++
Sbjct: 282 GLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS-GETPNDVTMLSILPACAHLGAID 340
Query: 321 HGKQIHAHL---IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE-MLHRNVVSWNTII 376
G+ IH ++ ++ + + +L++MYAKCG I + ++F+ M +R++ +WN +I
Sbjct: 341 IGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMI 400
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
+ A H +A +F +M+ GI+PD +TF+GLL+AC+H+G++ G F SM + Y I
Sbjct: 401 SGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEI 460
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAK 496
+P +EH+ C+IDLLG +G EAEE P+ D ++ +LL AC++ ++ +GE AK
Sbjct: 461 TPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAK 520
Query: 497 QLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE-PSYSMIEVQGTFEKF 555
+L ++P + YVLLSN+YA+ G W +VA R +L D G+KK+ P S IE+ +F
Sbjct: 521 KLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEF 580
Query: 556 TVAEFSHSKIGEI 568
+ + H + EI
Sbjct: 581 IIGDKLHPQNREI 593
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 194/381 (50%), Gaps = 42/381 (11%)
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSD----ALLVYGEAFEPNLVSFNALIAG 175
+ IHA +K G + ++ + L+ + V D A+ V+ EPNL+ +N + G
Sbjct: 5 RXIHAQMIKTGLHNTNYALSKLLE-FCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRG 63
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+ P +++ +M+ GLLPD ++F L+ C+ S ++G +H +K + +
Sbjct: 64 HALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLD 123
Query: 236 PFVGNTIMALYSKFNLIGEAEKAF----------------------------RLIEE--- 264
+V +++++Y++ + +A K F +L +E
Sbjct: 124 IYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPG 183
Query: 265 KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ 324
KD++SWN I+ +Y++ L +FKEM VRPD+ T ++++ACA S++ G+
Sbjct: 184 KDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRH 243
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
+H+ + ++ + NAL+++Y+K G + + +LF+ + +++V+SWNT+I + + L
Sbjct: 244 VHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNL 303
Query: 385 GGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE---AYFNSMEKTYGISPDIE 441
AL LF++M +G P+ VT + +L AC H G + G Y N +K G+ ++
Sbjct: 304 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIN--KKLKGVVTNVS 361
Query: 442 HF-TCLIDLLGRAGKLLEAEE 461
T LID+ + G + A++
Sbjct: 362 SLQTSLIDMYAKCGDIDAAQQ 382
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 201/427 (47%), Gaps = 45/427 (10%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD------ 61
LL C+K+K ++G +H VLK+G D+ V ++++YA+ G++ ARKVFD
Sbjct: 95 LLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRD 154
Query: 62 -------------------------EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL 96
E+ +++VSW+AMISG+ + G + ALE F +M +
Sbjct: 155 VVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMM 214
Query: 97 L----PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSS 152
+ P+E + +SACA S+ G+ +H++ G+AS + N+LI +Y K G
Sbjct: 215 MTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVE 274
Query: 153 DALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
A ++ + +++S+N LI G+ ++ +F+ MLR G P+ + L C+
Sbjct: 275 TACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACA 334
Query: 213 VSNDLRKGMILHCL---TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF-RLIEEKDLI 268
+ G +H +K + + + +++ +Y+K I A++ F + + L
Sbjct: 335 HLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLS 394
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
+WN I+ + +F M + G+ PDD TF +L+AC+ + G+ I
Sbjct: 395 TWNAMISGFAMHGRANAAFDIFSRMRMN-GIEPDDITFVGLLSACSHSGMLDLGRNIFRS 453
Query: 329 LIR-MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAA---HANHR 383
+ R + + ++++ GL + ++ N M + + V W +++ A H N
Sbjct: 454 MTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLE 513
Query: 384 LGGSALK 390
LG S K
Sbjct: 514 LGESFAK 520
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 154/321 (47%), Gaps = 9/321 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ +++ C+++ +++ G +H+ + G ++ + N +++LY+K G++ A ++FD +
Sbjct: 224 TMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGL 283
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
++++SW+ +I G+ + AL F +M PN+ S + ACA + ++ G+
Sbjct: 284 WNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGR 343
Query: 121 QIHAY---SLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF-EPNLVSFNALIAGF 176
IH Y LK ++S + SLI MY K G A V+ + +L ++NA+I+GF
Sbjct: 344 WIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGF 403
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESN 235
+ + F++F M G+ PD +F G L CS S L G I +T ++
Sbjct: 404 AMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPK 463
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
++ L L EAE+ + E D + W + + AC + E G S K++
Sbjct: 464 LEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLI 523
Query: 295 NDHGVRPDDFTFASILAACAG 315
+ S + A AG
Sbjct: 524 KIEPGNSGSYVLLSNIYAAAG 544
>gi|357504423|ref|XP_003622500.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497515|gb|AES78718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 655
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 181/583 (31%), Positives = 318/583 (54%), Gaps = 16/583 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S+ L +K L +G LHA ++K G + + N +L++Y KC + A+K+F+E+
Sbjct: 64 SNALKISAKKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPV 123
Query: 66 RNLVSWSAMI------SGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSL 116
RN+VSW+ MI + +++ L +F +M L +P+ F I C +
Sbjct: 124 RNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDI 183
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G Q+H +++K G+ FVG +L+ +Y K G+ +A V+ + +LV +N +++ +
Sbjct: 184 EMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCY 243
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRK----GMILHCLTVKCKL 232
V N PE+ F VF M + D F+F+ L + +S+D + G +H L ++
Sbjct: 244 VFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSV--ISDDALEYYDFGKQVHSLVLRQSF 301
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
+S+ V + ++ +Y+K I +A + F + +++++WNT I + D + + + KE
Sbjct: 302 DSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKE 361
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
M + G PD+ T +SI+++C +++ Q+HA +++ + V N+L++ Y+KCG
Sbjct: 362 MLRE-GFLPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCG 420
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
I+ ++K F ++V+W ++I A+A H L + ++FE+M + GIKPD + F+G+L+
Sbjct: 421 SITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLS 480
Query: 413 ACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDP 472
AC H GLV +G YF M Y I PD EH+TCL+DLLGR G + EA E + P+ D
Sbjct: 481 ACAHCGLVTKGLHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILRSMPIEVDS 540
Query: 473 IVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKML 532
LG + +C+L ++ + + A++LF ++P + Y ++SN++AS W DV RK +
Sbjct: 541 DTLGAFIGSCKLHSNMELAKLAAEKLFLIEPEKSVNYAVMSNIFASQKHWYDVERIRKTM 600
Query: 533 KDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+D K P S IE+ F + SH E+ L L
Sbjct: 601 EDKRDAKVPGCSWIEIGNQIHSFVSNDKSHPNALEMYVTLNML 643
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 189/371 (50%), Gaps = 15/371 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + L+ C++ ++ G+ LH +K+G D V ++ LYAKCG + AR+VF ++
Sbjct: 169 TFNGLICLCTQFNDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDV 228
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACA--GIQSLVK 118
S R+LV W+ M+S + A F+ M L +E+ F+S +S + ++
Sbjct: 229 SCRDLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDF 288
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+Q+H+ L+ + S V ++LI+MY K DA V+ E N+V++N +I GF
Sbjct: 289 GKQVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGN 348
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ + ++ K MLR+G LPD + + + C ++ + + + +H VK + V
Sbjct: 349 HGDGNEVMKLVKEMLREGFLPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLSV 408
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N++++ YSK I A K F L + DL++W + I A + EK +F++M + +G
Sbjct: 409 ANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLS-YG 467
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN-----QDVGVGNALVNMYAKCGL 353
++PD F +L+ACA V G H ++ N D LV++ + GL
Sbjct: 468 IKPDRIAFLGVLSACAHCGLVTKG----LHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGL 523
Query: 354 ISCSYKLFNEM 364
I+ ++++ M
Sbjct: 524 INEAFEILRSM 534
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 181/568 (31%), Positives = 308/568 (54%), Gaps = 8/568 (1%)
Query: 17 ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMIS 76
AL++G +H+ V + DV V+ ++N Y KCG + ARKVFD M R++ +W++MIS
Sbjct: 25 ALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMIS 84
Query: 77 GH---HQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYAS 133
+ ++GE + + F S + AC ++L G+ + + +
Sbjct: 85 AYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFEL 144
Query: 134 ISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLML 193
FVG +LI+MY + +A V+G + NL++++A+I F ++ + F++M
Sbjct: 145 DLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQ 204
Query: 194 RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
++G+LP+R +F L + + L + +H L + L+ + N ++ +Y + G
Sbjct: 205 QEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCE-TG 263
Query: 254 E---AEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
E AE + ++E+ + +WN I + + L ++ + + + D TF S+L
Sbjct: 264 ELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLE-AIPVDKVTFISVL 322
Query: 311 AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVV 370
AC S+ GK IH++ + L+ DV V NAL NMY+KCG + + ++F+ M R+ V
Sbjct: 323 NACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAV 382
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSM 430
SWN ++ A+A H LKL +M+ G+K + +TF+ +L++C+HAGL+ EG YF+S+
Sbjct: 383 SWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSL 442
Query: 431 EKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVI 490
GI EH+ CL+DLLGRAGKL EAE+Y K P + + +LL ACR+ +D+
Sbjct: 443 GHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDR 502
Query: 491 GERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQG 550
G+ A++L L P +S V+LSN+Y+ G W + A R+ + +KK P S I+V+
Sbjct: 503 GKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKN 562
Query: 551 TFEKFTVAEFSHSKIGEINYMLKTLSLA 578
+F V + SH + EI ++ L A
Sbjct: 563 KVHEFRVRDTSHPRAAEIYDKVEELCFA 590
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 187/390 (47%), Gaps = 20/390 (5%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C + LQ G + ++ + + D+ V ++ +YA+C A +VF M ++
Sbjct: 116 SILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQK 175
Query: 67 NLVSWSAMISG---HHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
NL++WSA+I+ H GE L Q +LPN F S ++ L + +IH
Sbjct: 176 NLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIH 235
Query: 124 AYSLKFGYASISFVGNSLISMYMK--VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+ G + + N+L+++Y + G A ++ E E + ++N LI G+ + +
Sbjct: 236 LLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGR 295
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ E ++ + + + D+ +F L C+ S L +G ++H V+C L+S+ V N
Sbjct: 296 SREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNA 355
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+ +YSK + A + F + + +SWN + A + + E+ L + ++M + GV+
Sbjct: 356 LTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQE-GVKL 414
Query: 302 DDFTFASILAACAGLASVQHGKQ-IHAHLIRMRLNQDVGVG------NALVNMYAKCGLI 354
+ TF S+L++C+ + G Q H+ L D G+ LV++ + G +
Sbjct: 415 NGITFVSVLSSCSHAGLIAEGCQYFHS------LGHDRGIEVKTEHYGCLVDLLGRAGKL 468
Query: 355 SCSYKLFNEMLHR-NVVSWNTIIAAHANHR 383
+ K ++M +V+W +++ A H+
Sbjct: 469 QEAEKYISKMPSEPEIVTWASLLGACRVHK 498
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 184/376 (48%), Gaps = 12/376 (3%)
Query: 99 NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY 158
N F + +++ +L KG+ IH+ + ++ FV +L++ Y K G +DA V+
Sbjct: 9 NVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVF 68
Query: 159 GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLR 218
++ ++N++I+ + +++ + F +F+ M +G DR +F L+ C +L+
Sbjct: 69 DGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQ 128
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
G + + E + FVG ++ +Y++ A + F +++K+LI+W+ I A +
Sbjct: 129 HGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFA 188
Query: 279 ---HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN 335
HC + L F+ M + G+ P+ TF S+L + ++ +IH + L+
Sbjct: 189 DHGHCGE---ALRYFRMMQQE-GILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLD 244
Query: 336 QDVGVGNALVNMYAKC--GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFE 393
+ NALVN+Y +C G + + + EM + + +WN +I + H AL+ ++
Sbjct: 245 DTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQ 304
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEGEA-YFNSMEKTYGISPDIEHFTCLIDLLGR 452
+++ I D VTFI +L AC + + EG+ + N++E G+ D+ L ++ +
Sbjct: 305 RLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVE--CGLDSDVIVKNALTNMYSK 362
Query: 453 AGKLLEAEEYTKKFPL 468
G + A P+
Sbjct: 363 CGSMENARRIFDSMPI 378
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 114/220 (51%), Gaps = 1/220 (0%)
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
ML +G+ + +F L + LRKG +H + + + FV ++ Y+K
Sbjct: 1 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ +A K F + + + +WN+ I+A S + +F+ M ++ G R D TF SIL
Sbjct: 61 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHE-GERCDRVTFLSILD 119
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
AC ++QHGK + + D+ VG AL+ MYA+C + ++F M +N+++
Sbjct: 120 ACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLIT 179
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
W+ II A A+H G AL+ F M+ GI P+ VTFI LL
Sbjct: 180 WSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLL 219
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 80/136 (58%)
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
GV+ + TF ++L + +++ GK IH+ + + DV V ALVN Y KCG ++ +
Sbjct: 5 GVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDA 64
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
K+F+ M R+V +WN++I+A++ G A +F++M+ G + D VTF+ +L AC +
Sbjct: 65 RKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNP 124
Query: 418 GLVKEGEAYFNSMEKT 433
++ G+ S+ +T
Sbjct: 125 ENLQHGKHVRESISET 140
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 94/184 (51%), Gaps = 5/184 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L+ C+ + +L +G +H+ ++ G+ DVIV N + N+Y+KCG M AR++FD M R
Sbjct: 320 SVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIR 379
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG-QQI 122
+ VSW+ M+ + Q GE L+ +M + N F S +S+C+ + +G Q
Sbjct: 380 SAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYF 439
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDA-LLVYGEAFEPNLVSFNALIAGFVENQQ 181
H+ G + L+ + + G +A + EP +V++ +L+ ++
Sbjct: 440 HSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKD 499
Query: 182 PEKG 185
++G
Sbjct: 500 LDRG 503
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 181/579 (31%), Positives = 308/579 (53%), Gaps = 44/579 (7%)
Query: 44 LNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPN 99
+ +Y+ G + AR +FD++ + +L +W+ +IS + G L A+++++ + P+
Sbjct: 18 IKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPD 77
Query: 100 EYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY- 158
+ + S ACA ++ ++ +++H +++FG+ S +GN+LI MY K S A LV+
Sbjct: 78 KLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFE 137
Query: 159 GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLR 218
G F +++S+ ++ + +V + F+ M G P+ + + L C+ DL+
Sbjct: 138 GMPFR-DVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLK 196
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
G +H V+ + N FV + ++ +Y+ I +A+ F + +D +SWN I A
Sbjct: 197 SGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYF 256
Query: 279 HCADYEKGLSVFKEMSND----------------------------------HGVRPDDF 304
+ EKGLSVF M ++ G +P+
Sbjct: 257 LNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQI 316
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T S+L AC L S++ GKQIH ++ R QD+ ALV MYAKCG + S ++F+ M
Sbjct: 317 TITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMM 376
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
R+ VSWNT+I A + H G AL LF +M +G++P+SVTF G+L+ C+H+ LV EG
Sbjct: 377 TKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGL 436
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRL 484
F+SM + + + PD +H +C++D+L RAG+L EA E+ KK P+ G LL CR+
Sbjct: 437 LIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRV 496
Query: 485 RRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYS 544
++V +G A +LF ++ YVLLSN+ S +W + + RK+++D G+ K P S
Sbjct: 497 YKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCS 556
Query: 545 MIEVQGTFEKFTVAEFSHSKIGEI----NYMLKTLSLAA 579
I+V+ F V + S+ + EI +YM + + +A
Sbjct: 557 WIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAG 595
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 195/431 (45%), Gaps = 45/431 (10%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+ C+ + + +H ++ G DV++ N ++++Y KC AR VF+ M R
Sbjct: 83 SVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFR 142
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIH 123
+++SW++M S + G AL F +M L PN +S + AC ++ L G+++H
Sbjct: 143 DVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVH 202
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ ++ G FV ++L++MY A LV+ + VS+N LI + N++ E
Sbjct: 203 GFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECE 262
Query: 184 KGFEVFKLMLRQGL-----------------------------------LPDRFSFAGGL 208
KG VF M+ +G+ P++ + L
Sbjct: 263 KGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVL 322
Query: 209 EICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLI 268
C+ LR G +H + + ++ +Y+K + + + F ++ ++D +
Sbjct: 323 PACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTV 382
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
SWNT I A S + E+ L +F+EM D GVRP+ TF +L+ C+ V G I
Sbjct: 383 SWNTMIIATSMHGNGEEALLLFREMV-DSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDS 441
Query: 329 LIR-MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAA---HANHR 383
+ R + D + +V++ ++ G + +Y+ +M + +W ++ + N
Sbjct: 442 MSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVE 501
Query: 384 LGG-SALKLFE 393
LG +A +LFE
Sbjct: 502 LGRIAANRLFE 512
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 153/358 (42%), Gaps = 46/358 (12%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+L C+ K L+ G +H V++ G+ +V VS+ ++N+YA C + A+ VFD M
Sbjct: 181 TVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSM 240
Query: 64 SERNLV-----------------------------------SWSAMISGHHQAGEHLLAL 88
S R+ V SW+A+I G Q G AL
Sbjct: 241 SRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKAL 300
Query: 89 EFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMY 145
E S+M PN+ S + AC ++SL G+QIH Y + + +L+ MY
Sbjct: 301 EVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMY 360
Query: 146 MKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA 205
K G + V+ + + VS+N +I + E+ +F+ M+ G+ P+ +F
Sbjct: 361 AKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFT 420
Query: 206 GGLEICSVSNDLRKG-MILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIE- 263
G L CS S + +G +I ++ +E + + ++ + S+ G E+A+ I+
Sbjct: 421 GVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSR---AGRLEEAYEFIKK 477
Query: 264 ---EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
E +W + C + E G + P ++ S + A L S
Sbjct: 478 MPIEPTAGAWGALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWS 535
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 90/189 (47%)
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
P + + +YS + A F I + DL +W I+A + + + + + +
Sbjct: 11 PHLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRH 70
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
+ V PD S+ ACA L V + K++H IR DV +GNAL++MY KC
Sbjct: 71 KNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSE 130
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ +F M R+V+SW ++ + + N L AL F +M G +P+SVT +L AC
Sbjct: 131 GARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACT 190
Query: 416 HAGLVKEGE 424
+K G
Sbjct: 191 DLKDLKSGR 199
>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
Length = 825
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 194/565 (34%), Positives = 313/565 (55%), Gaps = 13/565 (2%)
Query: 24 LHAAVLKMGIQ--PDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQA 81
L+ V+K+G D V + + +YA+ G + AR++FD ERN W+ MI G+ Q
Sbjct: 240 LYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQN 299
Query: 82 GEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
+ A++ F Q+ ++ F SA++A + +Q L G+Q+HAY LK +
Sbjct: 300 NCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVI 359
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
N++I MY + G + V+ E ++V++N +++ FV+N ++G + M +QG
Sbjct: 360 LNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGF 419
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
+ D + L + S G H ++ ++ G ++ +Y+K LI A++
Sbjct: 420 MVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDG-YLIDMYAKSGLITTAQQ 478
Query: 258 AFRL--IEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
F ++D +WN IA + E+G +VF++M + VRP+ T ASIL AC
Sbjct: 479 LFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMI-EQNVRPNAVTLASILPACNP 537
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
+ ++ GKQIH IR LNQ+V VG AL++MY+K G I+ + +F E L +N V++ T+
Sbjct: 538 MGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTM 597
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYG 435
I ++ H +G AL LF M +GIKPDSVTF+ +L+AC++AGLV EG F SME+ Y
Sbjct: 598 ILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYK 657
Query: 436 ISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF-PLGQDPIVLGTLLSACRLRRDVVIGERL 494
I P EH+ C+ D+LGR G++ EA E+ K G + G+LL ACR+ + +G+ +
Sbjct: 658 IQPSSEHYCCVADMLGRVGRVXEAYEFVKGLGEEGNTFRIWGSLLGACRIHGEFELGKVV 717
Query: 495 AKQLFHLQPTT--TSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTF 552
A +L ++ + T +VLLSN+YA++G W +V RK ++ GL KE S +EV G
Sbjct: 718 ANKLLEMEKGSXLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVEVAGHV 777
Query: 553 EKFTVAEFSHSKIGEINYMLKTLSL 577
F + H + EI ML+ L++
Sbjct: 778 NCFMSRDHKHPQCAEIYQMLEKLAM 802
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 134/478 (28%), Positives = 232/478 (48%), Gaps = 24/478 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMI--------- 54
+ SS L C++ ++L+ G +LH VL+ IV N +LN+Y+ C +
Sbjct: 106 TFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDF 165
Query: 55 ----LARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFS---QMHLLPNEYIFASAI 107
L R+VFD M +RN+V+W+ MIS + + + A + F +M + P F +
Sbjct: 166 NNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVF 225
Query: 108 SACAGIQSLVKGQQIHAYSLKFG--YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPN 165
A + ++ +K G Y FV +S I MY ++G A ++ E N
Sbjct: 226 PAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERN 285
Query: 166 LVSFNALIAGFVENQQPEKGFEVF-KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILH 224
+N +I G+V+N P + ++F ++M + D +F L S L G LH
Sbjct: 286 TEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLH 345
Query: 225 CLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYE 284
+K + N I+ +YS+ IG + K F + E+D+++WNT ++A +
Sbjct: 346 AYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDD 405
Query: 285 KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNAL 344
+GL + EM G D T ++L+ + L S + GKQ HA+LIR + Q G+ L
Sbjct: 406 EGLMLVFEMQK-QGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGI-QFEGMDGYL 463
Query: 345 VNMYAKCGLISCSYKLF--NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
++MYAK GLI+ + +LF N R+ +WN +IA + + L +F +M ++P
Sbjct: 464 IDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRP 523
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
++VT +L ACN G + G+ + + ++ ++ T L+D+ ++G + AE
Sbjct: 524 NAVTLASILPACNPMGTIGLGKQIHGFAIRCF-LNQNVFVGTALLDMYSKSGAITYAE 580
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 211/440 (47%), Gaps = 43/440 (9%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP----NEYIFASAISACA 111
A +FD + V W+ +I G + AL F+++M P + Y F+S + ACA
Sbjct: 56 ALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACA 115
Query: 112 GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMY----MKVGYSSDAL---------LVY 158
+SL G+ +H + L+ + S V NSL++MY +V Y A V+
Sbjct: 116 QARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVF 175
Query: 159 GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLR 218
+ N+V++N +I+ +V+ ++ + F++F+ M+R G+ P SF ND
Sbjct: 176 DTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMNDYD 235
Query: 219 KGMILHCLTVKCKLE--SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
+L+ L VK + + FV ++ + +Y++ + A + F E++ WNT I
Sbjct: 236 NANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGG 295
Query: 277 CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
+ + +F ++ DD TF S L A + L + G+Q+HA++++
Sbjct: 296 YVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTIL 355
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
V + NA++ MY++CG I S+K+F+ ML R+VV+WNT+++A + L L L +M+
Sbjct: 356 QVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQ 415
Query: 397 ATGIKPDSVTFIGLLTACN-----------HAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
G DSVT LL+ + HA L++ G F M+
Sbjct: 416 KQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHG-IQFEGMDGY------------ 462
Query: 446 LIDLLGRAGKLLEAEEYTKK 465
LID+ ++G + A++ +K
Sbjct: 463 LIDMYAKSGLITTAQQLFEK 482
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 169/332 (50%), Gaps = 11/332 (3%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S L S+ + L G LHA +LK V++ N ++ +Y++CG + + KVF M ER
Sbjct: 327 SALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLER 386
Query: 67 NLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
++V+W+ M+S Q G E L+ + + + + + +S + ++S G+Q H
Sbjct: 387 DVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAH 446
Query: 124 AYSLKFGYASISFVG--NSLISMYMKVGYSSDA--LLVYGEAFEPNLVSFNALIAGFVEN 179
AY ++ G I F G LI MY K G + A L ++ + ++NA+IAG+ +N
Sbjct: 447 AYLIRHG---IQFEGMDGYLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQN 503
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
E+GF VF+ M+ Q + P+ + A L C+ + G +H ++C L N FVG
Sbjct: 504 GLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVG 563
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ +YSK I AE F EK+ +++ T I + E+ LS+F M G+
Sbjct: 564 TALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGS-GI 622
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
+PD TF +IL+AC+ V G +I + R
Sbjct: 623 KPDSVTFVAILSACSYAGLVDEGLRIFQSMER 654
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 19/176 (10%)
Query: 254 EAEKAFRLIEEKDLISWNTFIAA--CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+A F I + WNT I C++ L + M + D +TF+S L
Sbjct: 55 QALHLFDSIPRPTTVLWNTIIIGFICNNMPI--DALLFYARMRASPSPKFDSYTFSSTLK 112
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY------------- 358
ACA S++ GK +H H++R V N+L+NMY+ C L Y
Sbjct: 113 ACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTC-LTEVPYLGTAYDFNNCDLV 171
Query: 359 -KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
++F+ M RNVV+WNT+I+ + A K+F M GI+P V+F+ + A
Sbjct: 172 RRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPA 227
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A +++S+L C+ + G +H ++ + +V V +L++Y+K G + A VF
Sbjct: 525 AVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFA 584
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
E E+N V+++ MI + Q G AL F M + P+ F + +SAC+
Sbjct: 585 ETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACS 637
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 185/521 (35%), Positives = 288/521 (55%), Gaps = 5/521 (0%)
Query: 51 GKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAI 107
G + A K F E+SE +++ W+A+I G+ Q + + M + PN + F +
Sbjct: 48 GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 107
Query: 108 SACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLV 167
AC G G+QIH + K+G+ S FV NSL+SMY K G S A +V+ + + +V
Sbjct: 108 KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVV 167
Query: 168 SFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLT 227
S+ ++I+G+V+N P + VFK M + + PD + + + DL +G +H L
Sbjct: 168 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLV 227
Query: 228 VKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGL 287
K LE P + ++ +Y+K L+ A F +E+ +LI WN I+ ++ E+ +
Sbjct: 228 TKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAI 287
Query: 288 SVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNM 347
+F+EM + +R D T S + A A + S++ + + ++ + D V L++M
Sbjct: 288 KLFREMITKN-IRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDM 346
Query: 348 YAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTF 407
YAKCG I + +F+ + ++VV W+ +I + H G A+ L+ +MK G+ P+ TF
Sbjct: 347 YAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTF 406
Query: 408 IGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
IGLLTAC ++GLVKEG F+ M +GI P +H++C++DLLGRAG L +A ++ P
Sbjct: 407 IGLLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMP 465
Query: 468 LGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAG 527
+ V G LLSAC++ R V +GE A+QLF L P T YV LSNLYAS +W VA
Sbjct: 466 IKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVAN 525
Query: 528 ARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
R M+ GL K+ +S IE+ G E F V + SH K EI
Sbjct: 526 VRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEI 566
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 182/386 (47%), Gaps = 17/386 (4%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L C T G +H K G +V V N ++++YAK G++ AR VFD++ +R
Sbjct: 106 VLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRT 165
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
+VSW+++ISG+ Q G+ + AL F +M ++ P+ S ++A ++ L +G+ IH
Sbjct: 166 VVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHG 225
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
K G + SL +MY K G A + +PNL+ +NA+I+G+ N E+
Sbjct: 226 LVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEE 285
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
++F+ M+ + + D + + + L L K + + FV ++
Sbjct: 286 AIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLID 345
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y+K I A F + +KD++ W+ I ++ + ++ EM GV P+D
Sbjct: 346 MYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQA-GVCPNDG 404
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG------NALVNMYAKCGLISCSY 358
TF +L AC V+ G ++ L D G+ + +V++ + G ++ +Y
Sbjct: 405 TFIGLLTACKNSGLVKEGWEL------FHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAY 458
Query: 359 KLFNEMLHRNVVS-WNTIIAAHANHR 383
M + VS W +++A HR
Sbjct: 459 DFIMSMPIKPGVSVWGALLSACKIHR 484
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 163/344 (47%), Gaps = 8/344 (2%)
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
Q++ + G F+ I+ + G + A + E EP+++ +NA+I G+ +
Sbjct: 19 DQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQK 78
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ ++ M + P+ F+F L+ C ++ G +H T K SN FV
Sbjct: 79 NIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQ 138
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N+++++Y+KF I A F + ++ ++SW + I+ D + L+VFKEM + V
Sbjct: 139 NSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCN-V 197
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+PD S++ A + + GK IH + ++ L + + +L MYAK GL+ +
Sbjct: 198 KPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARF 257
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG- 418
FN M N++ WN +I+ +AN+ G A+KLF +M I+ DS+T + A G
Sbjct: 258 FFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGS 317
Query: 419 --LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
L + + Y + E D T LID+ + G + A
Sbjct: 318 LELARWLDGYISKSE----YRDDTFVNTGLIDMYAKCGSIYLAR 357
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 138/280 (49%), Gaps = 8/280 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQ--PDVIVSNHVLNLYAKCGKMILARKVFD 61
++ S++ + + L QG S+H V K+G++ PD+++S + +YAK G + +AR F+
Sbjct: 203 ALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVIS--LTTMYAKRGLVEVARFFFN 260
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
M + NL+ W+AMISG+ G A++ F +M ++ + SA+ A A + SL
Sbjct: 261 RMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLEL 320
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+ + Y K Y +FV LI MY K G A V+ + ++V ++ +I G+
Sbjct: 321 ARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGL 380
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ ++ ++ M + G+ P+ +F G L C S +++G L L +E +
Sbjct: 381 HGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQH 440
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLIS-WNTFIAAC 277
+ ++ L + + +A + K +S W ++AC
Sbjct: 441 YSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSAC 480
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/138 (19%), Positives = 65/138 (47%), Gaps = 1/138 (0%)
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA 378
++H Q++ LI L++ + +N G ++ ++K F E+ +++ WN II
Sbjct: 15 LKHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKG 74
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISP 438
+ + + ++++ M+ + + P+ TF+ +L AC + G+ K YG
Sbjct: 75 YTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFK-YGFGS 133
Query: 439 DIEHFTCLIDLLGRAGKL 456
++ L+ + + G++
Sbjct: 134 NVFVQNSLVSMYAKFGQI 151
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 169/490 (34%), Positives = 282/490 (57%), Gaps = 2/490 (0%)
Query: 88 LEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMK 147
L+ L P ++ + I+ACA ++L ++IH + + +F+ NSLI +Y K
Sbjct: 39 LDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCK 98
Query: 148 VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGG 207
G +A V+ + + ++VS+ +LIAG+ +N P + + ML+ P+ F+FA
Sbjct: 99 CGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASL 158
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDL 267
L+ D G +H L VKC + +VG+ ++ +Y++ + A F ++ K+
Sbjct: 159 LKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNG 218
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHA 327
+SWN I+ + D E L VF EM + G FT++SI + AG+ +++ GK +HA
Sbjct: 219 VSWNALISGFARKGDGETALMVFAEMQRN-GFEATHFTYSSIFSGLAGIGALEQGKWVHA 277
Query: 328 HLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGS 387
H+++ R VGN +++MYAK G + + K+F +L++++V+WN+++ A A + LG
Sbjct: 278 HMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKE 337
Query: 388 ALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLI 447
A+ FE+M+ +GI + +TF+ +LTAC+H GLVKEG+ YF+ M K Y + P+IEH+ ++
Sbjct: 338 AVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVV 396
Query: 448 DLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTS 507
DLLGRAG L A + K P+ V G LL+ACR+ ++ +G+ A +F L P +
Sbjct: 397 DLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSG 456
Query: 508 PYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGE 567
P VLL N+YAS G W A RKM+K +G+KKEP+ S +E+ + F + +H + E
Sbjct: 457 PPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEE 516
Query: 568 INYMLKTLSL 577
I M +S+
Sbjct: 517 IYKMWDEISM 526
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 188/381 (49%), Gaps = 8/381 (2%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C+++K L +H + + D + N +++LY KCG ++ A KVFD+M ++++VSW
Sbjct: 61 CAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDMVSW 120
Query: 72 SAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
+++I+G+ Q A+ M PN + FAS + A G QIHA ++K
Sbjct: 121 TSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVK 180
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
+ +VG++L+ MY + G A V+ + N VS+NALI+GF E V
Sbjct: 181 CDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMV 240
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
F M R G F+++ + L +G +H VK + + FVGNT++ +Y+K
Sbjct: 241 FAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAK 300
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
+ +A K F + KDL++WN+ + A + ++ +S F+EM G+ + TF
Sbjct: 301 SGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKS-GIYLNQITFLC 359
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK-LFNEMLHR 367
IL AC+ V+ GK + L ++ +V++ + GL++ + +F +
Sbjct: 360 ILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEP 419
Query: 368 NVVSWNTIIAA---HANHRLG 385
W ++AA H N ++G
Sbjct: 420 TAAVWGALLAACRMHKNAKVG 440
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+ + AL+QG +HA ++K + V N +L++YAK G MI ARKVF+ +
Sbjct: 255 TYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERV 314
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
++LV+W++M++ Q G A+ F +M + N+ F ++AC+
Sbjct: 315 LNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACS 365
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 187/564 (33%), Positives = 301/564 (53%), Gaps = 14/564 (2%)
Query: 19 QQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGH 78
+ G +H + G ++++ ++++ +Y K ++ ARKVFD M E++ + W+ MISG+
Sbjct: 136 RAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGY 195
Query: 79 HQAGEHLLALEFFSQMHLLPNE-------YIFASAISACAGIQSLVKGQQIHAYSLKFGY 131
+ ++ +++ F L NE + A A +Q L G QIH+ + K G
Sbjct: 196 RKNEMYVESIQVFRD---LINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGC 252
Query: 132 ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKL 191
S +V IS+Y K G A ++ E P++V++NA+I G+ N + E +FK
Sbjct: 253 YSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKE 312
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
++ G + + + + VS L +H ++K S+ V + +YSK N
Sbjct: 313 LMLSGA---KLKSSTLVSLVPVSGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNE 369
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
I A K F EK L SWN I+ + E +S+F+EM N P+ T IL+
Sbjct: 370 IESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSE-FSPNPVTITCILS 428
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
ACA L ++ GK +H + + V AL+ MYAKCG I+ + +LF+ M +N V+
Sbjct: 429 ACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVT 488
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
WNT+I+ + H G AL +F +M +GI P VTF+ +L AC+HAGLVKEG+ FNSM
Sbjct: 489 WNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMI 548
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
YG P ++H+ C++D+LGRAG L A ++ + P+ P V TLL ACR+ +D +
Sbjct: 549 HRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLA 608
Query: 492 ERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGT 551
++++LF L P +VLLSN++++D + A R+ K L K P Y++IE+ T
Sbjct: 609 RTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGET 668
Query: 552 FEKFTVAEFSHSKIGEINYMLKTL 575
FT + SH ++ I+ L+ L
Sbjct: 669 PHVFTSGDQSHPQVKAIHEKLEKL 692
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 200/416 (48%), Gaps = 13/416 (3%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L ++ + L+ G+ +H+ K G V ++LY+KCGK+ +A +F E +
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPD 286
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSL 127
+V+++AMI G+ GE L+L F ++ L + ++ +S L+ IH YSL
Sbjct: 287 IVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLIYAIHGYSL 346
Query: 128 KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE 187
K + S + V +L ++Y K+ A ++ E+ E +L S+NA+I+G+ +N E
Sbjct: 347 KSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAIS 406
Query: 188 VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYS 247
+F+ M P+ + L C+ L G +H L ES+ +V ++ +Y+
Sbjct: 407 LFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYA 466
Query: 248 KFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFA 307
K I EA + F + +K+ ++WNT I+ ++ L++F EM N G+ P TF
Sbjct: 467 KCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNS-GIAPTPVTFL 525
Query: 308 SILAACAGLASVQHGKQIHAHLI-RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM-L 365
+L AC+ V+ G +I +I R V +V++ + G + + + M +
Sbjct: 526 CVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPI 585
Query: 366 HRNVVSWNTIIAA---HANHRLGGS-ALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
W T++ A H + L + + KLFE + PD+V + LL+ + A
Sbjct: 586 QPGPSVWETLLGACRIHKDTNLARTVSEKLFE------LDPDNVGYHVLLSNIHSA 635
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 110/461 (23%), Positives = 210/461 (45%), Gaps = 11/461 (2%)
Query: 25 HAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEH 84
HA ++ G + D+ + + + G + AR +F + ++ ++ ++ G
Sbjct: 40 HAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESP 99
Query: 85 LLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
+L F+ + L PN +A AISA +G + G IH ++ G S +G++
Sbjct: 100 HSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSN 159
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP- 199
++ MY K DA V+ E + + +N +I+G+ +N+ + +VF+ ++ +
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
D + L + +LR GM +H L K S+ +V ++LYSK I A F
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLF 279
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
R D++++N I + + E LS+FKE+ G + T S++ L +
Sbjct: 280 REFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLS-GAKLKSSTLVSLVPVSGHLMLI 338
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
IH + ++ V AL +Y+K I + KLF+E +++ SWN +I+ +
Sbjct: 339 Y---AIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
+ L A+ LF +M+ + P+ VT +L+AC G + G+ + + + ++
Sbjct: 396 TQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGK-WVHDLVRSTDFESS 454
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
I T LI + + G + EA P ++ + T++S
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDFMP-KKNEVTWNTMIS 494
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I+ +L C++ AL G +H V + + VS ++ +YAKCG + AR++FD M
Sbjct: 422 TITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFM 481
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
++N V+W+ MISG+ G AL FS+M + P F + AC+ + +G
Sbjct: 482 PKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGD 541
Query: 121 QI 122
+I
Sbjct: 542 EI 543
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 77/173 (44%), Gaps = 13/173 (7%)
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
S+ H Q HA ++ D+ + L + G I + +F + +V +N ++
Sbjct: 31 TSISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLM 90
Query: 377 AAHANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTAC-----NHAGLVKEGEAYFNSM 430
+ + S+L +F + K+T +KP+S T+ ++A + AG V G+A +
Sbjct: 91 RGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGC 150
Query: 431 EKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
+ + +I + + + ++ +A + + P +D I+ T++S R
Sbjct: 151 DSELLLGSNI------VKMYFKFWRVEDARKVFDRMP-EKDTILWNTMISGYR 196
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 181/571 (31%), Positives = 312/571 (54%), Gaps = 5/571 (0%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +L C+ + G+ LH V+ G+ + + N +L++Y+KCG+ A K+F
Sbjct: 235 AVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFR 294
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
MS + V+W+ MISG+ Q+G +L FF +M +LP+ F+S + + + ++L
Sbjct: 295 MMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEY 354
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+QIH Y ++ + F+ ++LI Y K S A ++ + ++V F A+I+G++
Sbjct: 355 CRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLH 414
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N E+F+ +++ + P+ + L + L+ G LH +K ++ +
Sbjct: 415 NGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNI 474
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
G ++ +Y+K + A + F + ++D++SWN+ I C+ + + +F++M G
Sbjct: 475 GCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVS-G 533
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ D + ++ L+ACA L S GK IH +I+ L DV + L++MYAKCG + +
Sbjct: 534 ICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAM 593
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTACNHA 417
+F+ M +N+VSWN+IIAA+ NH +L LF +M + +G +PD +TF+ +++ C H
Sbjct: 594 NVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHV 653
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
G V EG +F SM + YGI P EH+ C++DL GRAG+L EA E K P D V GT
Sbjct: 654 GDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGT 713
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL A RL ++V + + + +L L P + YVL+SN +A+ G W V R ++K+ +
Sbjct: 714 LLGASRLHKNVELAKVASSRLMDLDPWNSGYYVLISNAHANTGEWESVTKVRSLMKEREV 773
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
+K P YS IE+ F + +H + I
Sbjct: 774 QKIPGYSWIEINKITHLFVSGDVNHPESSHI 804
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 227/455 (49%), Gaps = 5/455 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
L+ C K + L V +G+ + V++ ++ Y + GK+ +A K+FD + +++
Sbjct: 140 LVKACVALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKD 199
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
V W+ M++G+ + G ++ FS M + PN F +S CA + G Q+H
Sbjct: 200 CVIWNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHG 259
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ G + NSL+SMY K G DA+ ++ + V++N +I+G+V++ E+
Sbjct: 260 LVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEE 319
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
F M+ G+LPD +F+ L S +L +HC ++ + + F+ + ++
Sbjct: 320 SLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALID 379
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
Y K + A+K F D++ + I+ H L +F+ + + P++
Sbjct: 380 AYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVK-ISPNEI 438
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T SIL GL +++ G+++H +I+ + +G A+++MYAKCG ++ +Y++F +
Sbjct: 439 TLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRL 498
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
R++VSWN++I A +A+ +F QM +GI D V+ L+AC + G+
Sbjct: 499 SKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGK 558
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
A M K + ++ D+ + LID+ + G L A
Sbjct: 559 AIHGFMIK-HSLALDVYSESTLIDMYAKCGNLKAA 592
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/487 (24%), Positives = 231/487 (47%), Gaps = 8/487 (1%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
+ + +S LL CS L+QG +HA V+ I D +L +YA CG K+F
Sbjct: 30 LPRRLSLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMF 89
Query: 61 DEMSER--NLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQS 115
+ R ++ W+++IS + G AL F+ +M P+ F + AC +++
Sbjct: 90 YRLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKN 149
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
+ + G FV +SLI Y++ G A ++ + + V +N ++ G
Sbjct: 150 FKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNG 209
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+ + + + F LM + P+ +F L +C+ + G+ LH L V L+
Sbjct: 210 YAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFE 269
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
+ N+++++YSK +A K FR++ D ++WN I+ E+ L F EM +
Sbjct: 270 GSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMIS 329
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
GV PD TF+S+L + + ++++ +QIH +++R ++ D+ + +AL++ Y KC +S
Sbjct: 330 S-GVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVS 388
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ K+F++ +VV + +I+ + ++ L AL++F + I P+ +T + +L
Sbjct: 389 MAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIG 448
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
+K G + K G +ID+ + G++ A E + +D +
Sbjct: 449 GLLALKLGRELHGFIIKK-GFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLS-KRDIVSW 506
Query: 476 GTLLSAC 482
++++ C
Sbjct: 507 NSMITRC 513
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 175/494 (35%), Positives = 283/494 (57%), Gaps = 3/494 (0%)
Query: 76 SGHHQAGEHLLALEFFSQMHLLP-NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
+GH + HL +E P +++ A A+ +C+ + +L G+ + AY++K G +
Sbjct: 96 AGHPEDALHLF-IEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVAD 154
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
FV +SLI MY G + A LV+ A E +V +NA++A +++N + E+FK ML
Sbjct: 155 RFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLE 214
Query: 195 QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGE 254
G+ D + + C D + G + + L NP + +M +Y+K IG+
Sbjct: 215 VGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGK 274
Query: 255 AEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA 314
A + F ++ +D+++W+ I+ + + L +F EM V P+D T S+L+ACA
Sbjct: 275 ARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLAR-VEPNDVTMVSVLSACA 333
Query: 315 GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNT 374
L +++ GK +H+++ R RL+ +G ALV+ YAKCG I + + F M +N +W
Sbjct: 334 VLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTA 393
Query: 375 IIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTY 434
+I A + G AL+LF M+ GI+P VTFIG+L AC+H+ LV+EG +F+SM + Y
Sbjct: 394 LIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDY 453
Query: 435 GISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERL 494
GI P +EH+ C++DLLGRAG + EA ++ + P+ + ++ LLS+C + R+V IGE
Sbjct: 454 GIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEA 513
Query: 495 AKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEK 554
KQ+ L P+ + YVLLSN+YAS G W D A RK +KD G++K P S+IE+ G +
Sbjct: 514 LKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLIELDGVVFE 573
Query: 555 FTVAEFSHSKIGEI 568
F + H ++ EI
Sbjct: 574 FFAEDSDHPELREI 587
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 184/395 (46%), Gaps = 19/395 (4%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
L CS+ AL G + A +K G+ D V + ++++YA CG + AR VFD E +
Sbjct: 127 LKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGV 186
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAY 125
V W+A+++ + + G+ + +E F M + +E S ++AC I G+ + +
Sbjct: 187 VMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGH 246
Query: 126 SLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKG 185
+ G A + +L+ MY K G A ++ ++V+++A+I+G+ + Q +
Sbjct: 247 VDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREA 306
Query: 186 FEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMAL 245
+F M + P+ + L C+V L G +H + +L +G ++
Sbjct: 307 LGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDF 366
Query: 246 YSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFT 305
Y+K I +A +AF + K+ +W I + + L +F M + G+ P D T
Sbjct: 367 YAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSM-REAGIEPTDVT 425
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG------NALVNMYAKCGLISCSYK 359
F +L AC+ V+ G++ H M +D G+ +V++ + GL+ +Y+
Sbjct: 426 FIGVLMACSHSCLVEEGRR---HFDSM--ARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQ 480
Query: 360 LFNEM-LHRNVVSWNTIIAAHANHR---LGGSALK 390
M + N V W ++++ A HR +G ALK
Sbjct: 481 FIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALK 515
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 160/322 (49%), Gaps = 15/322 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S++ C + + G + V + G+ + + ++++YAKCG++ AR++FD M
Sbjct: 223 TLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGM 282
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
R++V+WSAMISG+ QA + AL FS+M L PN+ S +SACA + +L G+
Sbjct: 283 QSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGK 342
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEP----NLVSFNALIAGF 176
+H+Y + + + +G +L+ Y K G DA+ EAFE N ++ ALI G
Sbjct: 343 WVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAV----EAFESMPVKNSWTWTALIKGM 398
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
N + + E+F M G+ P +F G L CS S + +G H ++ P
Sbjct: 399 ATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGR-RHFDSMARDYGIKP 457
Query: 237 FVGN--TIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKEM 293
V + ++ L + L+ EA + R + E + + W +++C+ + G K++
Sbjct: 458 RVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQI 517
Query: 294 SNDHGVRPDDFTFASILAACAG 315
+ + D+ S + A AG
Sbjct: 518 ISLNPSHSGDYVLLSNIYASAG 539
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/580 (30%), Positives = 312/580 (53%), Gaps = 6/580 (1%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
+A+ +S+L K LQQ +HA ++ G+ + +SN ++N Y CG + A+++F
Sbjct: 23 LAQPHASILRKLKDLKPLQQ---IHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIF 79
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLV 117
+N+VSW+ +ISG + + A++ F +M + PN +S + A A + +
Sbjct: 80 HHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIR 139
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+ +H + ++ G+ FV +L+ MY K G A ++ E N+V++NA+++G+
Sbjct: 140 IAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYS 199
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
++ E+ ++F LM R+GLL D ++ + L+ G +H ++ E++
Sbjct: 200 DHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKH 259
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+ +M +Y N + +A + F + KD+ +W + S +++ + F +M
Sbjct: 260 IKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQ 319
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
++ D IL++C+ ++Q G+++HA I+ ++ VG+A+++MYA CG + +
Sbjct: 320 NLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDA 379
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+ F M ++VV WN +IA + + G A+ LF QMK +G+ PD TF+ +L AC+HA
Sbjct: 380 KRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHA 439
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
G+V EG F M KT + P+++H+ C+ID+LGRAG+L A + P D V T
Sbjct: 440 GMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYST 499
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL ACR+ ++ +G +++++F ++P YVLLSN+YA G W V R L+ +
Sbjct: 500 LLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRM 559
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
KK+P +S IE+ F E H + +I +LK L L
Sbjct: 560 KKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLIL 599
>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
Length = 744
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 186/579 (32%), Positives = 298/579 (51%), Gaps = 13/579 (2%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD-----EM 63
L C+ K L G+ +H ++K G+ D + + ++ +Y KCG + A VF+ E+
Sbjct: 149 LSSCASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNEL 208
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
RN+ W+ MI G+ LALE F +M L P+ + C+ + L G+
Sbjct: 209 VGRNMAVWNVMILGYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGK 268
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH L G VG +L+ MY K G +L ++ + NLV + +++ +N
Sbjct: 269 QIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNG 328
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
P + E F + PD L CS + +GM +H +K +S+ FVG
Sbjct: 329 YPNEALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGG 388
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIA--ACSHCADYEKGLSVFKEMSNDHG 298
++ Y K + A++ F + +DL+SWN I+ A + CAD + L F++M +
Sbjct: 389 ALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCAD--EALKAFRDMQSKQ- 445
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
++P+ T A IL+ C L+ + K++H +L+R + V N+L++ YAKCG I S
Sbjct: 446 IKPNTVTMACILSVCTHLSVMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSR 505
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+F ++ RN V+WN+I+ H FE+MK IKPD TF LL++C+H+G
Sbjct: 506 TVFEKLPVRNEVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSG 565
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
V G YFNSM + Y + P +E +TC++DLLGRAG L +A + P D + G+L
Sbjct: 566 KVDAGWKYFNSMMEDYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIWGSL 625
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L++C+ + + E +A +F L ++ VLL+NLY G +V R +K GLK
Sbjct: 626 LASCKNHGNTKLAEVVANHIFELDASSVGYRVLLANLYEDSGNLNEVFRVRTDIKQMGLK 685
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
K+P S IEV + F ++SH + G+I +++LSL
Sbjct: 686 KQPGCSWIEVDNSIHIFVAGDYSHDRSGDIYATIESLSL 724
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 175/366 (47%), Gaps = 9/366 (2%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
F I A G+ + KG+QIH + LKFG+ FV NSL+ MY K G +A+ ++
Sbjct: 42 FPCLIKAFGGLYDVNKGKQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERME 101
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ--GLLPDRFSFAGGLEICSVSNDLRKG 220
E + VS+N +I+GF ++ K +F+ M+++ G +R + L C+ L G
Sbjct: 102 ERDSVSWNTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHG 161
Query: 221 MILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS-----WNTFIA 275
+ +H VK ++S+ F+ + ++ +Y K I AE F I + +L+ WN I
Sbjct: 162 LEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMIL 221
Query: 276 ACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN 335
L +F EM + G+ PD T +L C+ L + GKQIH ++ + L+
Sbjct: 222 GYVSNECLSLALELFVEML-ELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLD 280
Query: 336 QDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM 395
DV VG AL+ MY KCG S ++F + N+V W +++ A + AL+ F +
Sbjct: 281 DDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEF 340
Query: 396 KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGK 455
PD V + L AC+ L G A + G D+ L+D G+ G
Sbjct: 341 MLDCGFPDPVILLAALRACSFLSLKPRGMA-IHGFAIKMGFDSDVFVGGALVDFYGKCGD 399
Query: 456 LLEAEE 461
+ A++
Sbjct: 400 MEYAQQ 405
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 5/203 (2%)
Query: 266 DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF-ASILAACAGLASVQHGKQ 324
D+ N I C+ +E + V+ + + G ++F F ++ A GL V GKQ
Sbjct: 2 DVSKVNRMIKECTEDGFFEDAIRVYLDFI-ECGFPVEEFRFFPCLIKAFGGLYDVNKGKQ 60
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
IH HL++ QD+ V N+L+ MY KCG + +F M R+ VSWNT+I+
Sbjct: 61 IHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGD 120
Query: 385 GGSALKLFEQM--KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEH 442
+L +F +M + G + V + L++C + G + K G+ D
Sbjct: 121 YVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKK-GVDSDEFL 179
Query: 443 FTCLIDLLGRAGKLLEAEEYTKK 465
+ LI++ + G + AE ++
Sbjct: 180 VSALIEMYMKCGDIKNAENVFER 202
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++ +L C+ + +H +L+ + + +V+N +++ YAKCG + +R VF+++
Sbjct: 452 TMACILSVCTHLSVMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKL 511
Query: 64 SERNLVSWSAMISG---HHQAGEHLLALEFFSQMHLLPNEYIFASAISACA 111
RN V+W++++ G H + E E + ++ P+ F S +S+C+
Sbjct: 512 PVRNEVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCS 562
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 196/582 (33%), Positives = 320/582 (54%), Gaps = 17/582 (2%)
Query: 5 ISSLLHHCSKTKALQQGISLHAA-VLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++ L C + L+ G LHA VL ++NH++ +Y+ C + A ++FD M
Sbjct: 20 LAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAM 79
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
NLVSW+ ++SG Q H AL FS M L+P ++ +SA A A + + G
Sbjct: 80 PRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGA 139
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H ++ G+ + FV ++L MY K G +A V+ + + + V++ A+I G+ +N
Sbjct: 140 QLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNG 199
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSV---SNDLRKGMI---LHCLTVKCKLES 234
E F+ M R+GL+ A +CSV S L+ G + +H +K E
Sbjct: 200 NLEAAVIAFRDMRREGLVG-----ADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQ 254
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEK-DLISWNTFIAACSHCADYEKGLSVFKEM 293
V N + +Y+K + A + ++ + +++S + I EK L +F E+
Sbjct: 255 EVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIEL 314
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
GV P++FTF+S++ CA A ++ G Q+HA +I+ L D V + L++MY KCGL
Sbjct: 315 RR-QGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGL 373
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
IS S +LF E+ + ++WN I A H G A++ F++M ++GI+P+ +TF+ LLTA
Sbjct: 374 ISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTA 433
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C+HAGLV EG YF SM+ +GI P EH++C+ID+ GRAG+L EAE++ + P+ +
Sbjct: 434 CSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAY 493
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
+LL ACR+R + +GE A + L+P T +V LS +YAS G W DV RK+++
Sbjct: 494 GWCSLLGACRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMR 553
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
D+ +KK P +S ++ F ++SH + +I L+ L
Sbjct: 554 DNRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQEKIYEKLEEL 595
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 92/177 (51%), Gaps = 9/177 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS++ C+ L+QG LHA V+K + D VS+ +L++Y KCG + L+ ++F E+
Sbjct: 325 TFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEI 384
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
++W+A I+ Q G A+ F +M + PN F S ++AC+ + +G
Sbjct: 385 EYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGL 444
Query: 121 QIHAYSLKFGYASISFVG---NSLISMYMKVGYSSDALLVYGE-AFEPNLVSFNALI 173
+ + YS+K + I G + +I MY + G +A GE +PN + +L+
Sbjct: 445 K-YFYSMK-DHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLL 499
>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
Length = 734
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 181/554 (32%), Positives = 292/554 (52%), Gaps = 4/554 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S L C K ++L G +H + + P + N +L +Y CG I +KVFDEM
Sbjct: 89 SYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEM 148
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+NLVSW +IS + + GE A+ FS M + PN ++ S + +C G L G+
Sbjct: 149 LMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGK 208
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H++ ++ + V ++ +MY++ G+ A LV+ N V++ L+ G+ + +
Sbjct: 209 QMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAK 268
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ E E+F M +G+ D F F+ L++C D G +H VK ES VG
Sbjct: 269 KLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGT 328
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ Y K I A ++F I E + +SW+ I+ S E + +F + ++ GV
Sbjct: 329 PLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSE-GVV 387
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
+ F + S+ ACA A++ G Q H I+ L + +A+V MY+KCG + + +
Sbjct: 388 LNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRA 447
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F + + V+W II+ +A H AL F +M++ G++P++VTFI +LTAC+H+GLV
Sbjct: 448 FESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLV 507
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
E + Y SM + YG+ P I+H+ C+ID RAG L EA E + P D + +LL
Sbjct: 508 AEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLG 567
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
C D+ +G+ A+ LF L P T+ Y+LL NLY++ G W + RK++ + LKKE
Sbjct: 568 GCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKE 627
Query: 541 PSYSMIEVQGTFEK 554
S S I V+G +
Sbjct: 628 VSCSWISVKGQVHR 641
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
KEM +D V ++ + AC L S+ G+ IH L R N + N L+ MY
Sbjct: 75 LKEM-DDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYC 133
Query: 350 KCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
CG K+F+EML +N+VSW +I+A+A + A++LF M+A+GI+P+S ++
Sbjct: 134 DCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMS 193
Query: 410 LLTAC 414
LL +C
Sbjct: 194 LLQSC 198
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 181/576 (31%), Positives = 308/576 (53%), Gaps = 34/576 (5%)
Query: 34 QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQ 93
+P + N +L Y K + A ++FD M ER++VSW+ M+S Q+G AL+
Sbjct: 201 EPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVD 260
Query: 94 MH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGY 150
M + + + S+++ACA + SL G+Q+HA ++ +V ++L+ +Y K G
Sbjct: 261 MQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGC 320
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
+A V+ + N V++ LI+GF++ + E+F M + + D+F+ A +
Sbjct: 321 FKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISG 380
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
C DL G LH L +K V N+++++Y+K + + AE FR + EKD++SW
Sbjct: 381 CCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSW 440
Query: 271 NTFIAACSHCADY-------------------------------EKGLSVFKEMSNDHGV 299
+ I A S + E GL ++K M ++ V
Sbjct: 441 TSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYV 500
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
RPD T+ ++ CA L + + G QI +++ L D V NA++ MY+KCG I + K
Sbjct: 501 RPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARK 560
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F+ + +++VSWN +I ++ H +G A+++F+ + G KPD ++++ +L+ C+H+GL
Sbjct: 561 VFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGL 620
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V+EG+ YF+ M++ + ISP +EHF+C++DLLGRAG L EA++ P+ V G LL
Sbjct: 621 VQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALL 680
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
SAC++ + + E AK +F L + Y+L++ +YA G D A RK+++D G+KK
Sbjct: 681 SACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKK 740
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P YS +EV F + SH ++ I L L
Sbjct: 741 NPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDEL 776
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/495 (23%), Positives = 225/495 (45%), Gaps = 69/495 (13%)
Query: 34 QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQ 93
P+VI N +LN YAK G++ A ++F M R++ SW+ ++SG+ Q+ ++L++LE F
Sbjct: 68 HPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLS 127
Query: 94 MHL----LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
MH PN + A A+ +C + Q+ A KF S V +L+ M+++ G
Sbjct: 128 MHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCG 187
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVE-----------NQQPEKGFEVFKLML----- 193
A ++ EP + N+++AG+V+ + PE+ + +M+
Sbjct: 188 AVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQ 247
Query: 194 ---------------RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+G+ D ++ L C+ + LR G LH ++ +P+V
Sbjct: 248 SGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYV 307
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
+ ++ LY+K EA+ F + +++ ++W I+ + + + +F +M +
Sbjct: 308 ASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAEL- 366
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC------- 351
+ D F A++++ C + G+Q+H+ ++ Q V V N+L++MYAKC
Sbjct: 367 MTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAE 426
Query: 352 ------------------------GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGS 387
G ++ + + F+ M +NV++WN ++ A+ H
Sbjct: 427 AIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEED 486
Query: 388 ALKLFEQMKATG-IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCL 446
L++++ M + ++PD VT++ L C G K G+ K G+ D +
Sbjct: 487 GLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKV-GLIIDTSVANAV 545
Query: 447 IDLLGRAGKLLEAEE 461
I + + G++LEA +
Sbjct: 546 ITMYSKCGRILEARK 560
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 214/450 (47%), Gaps = 51/450 (11%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ + +S L C++ +L+ G LHA V++ D V++ ++ LYAK G A+ VF+
Sbjct: 270 STTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFN 329
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
+ +RN V+W+ +ISG Q G ++E F+QM + +++ A+ IS C L
Sbjct: 330 SLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCL 389
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMK------------------------------- 147
G+Q+H+ LK G V NSLISMY K
Sbjct: 390 GRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQ 449
Query: 148 VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL-PDRFSFAG 206
VG + A + E N++++NA++ ++++ E G ++K+ML + + PD ++
Sbjct: 450 VGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVT 509
Query: 207 GLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKD 266
+ C+ + G + TVK L + V N ++ +YSK I EA K F + KD
Sbjct: 510 LFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKD 569
Query: 267 LISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
++SWN I S ++ + +F ++ G +PD ++ ++L+ C+ VQ GK
Sbjct: 570 IVSWNAMITGYSQHGMGKQAIEIFDDILK-RGAKPDYISYVAVLSGCSHSGLVQEGK--- 625
Query: 327 AHLIRMRLNQDVGVG----NALVNMYAKCGLISCSYKLFNEMLHRNVVS-WNTIIAA--- 378
+ M+ ++ G + +V++ + G ++ + L ++M + W +++A
Sbjct: 626 FYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKI 685
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFI 408
H N+ L A K ++ + PDS +++
Sbjct: 686 HGNNELAELAAKHVFELDS----PDSGSYM 711
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 165/376 (43%), Gaps = 65/376 (17%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYM---------------- 146
FA A+ +C +L + +H + G AS F+ N+L+ Y+
Sbjct: 7 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 66
Query: 147 ----------------KVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFK 190
K+G SDA+ ++G ++ S+N L++G+ +++Q E F
Sbjct: 67 AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFL 126
Query: 191 LMLRQG-LLPDRFSFAGGLEICSV-------------------SNDLRKGMILHCLTVKC 230
M R G P+ F+ A ++ C +D L + V+C
Sbjct: 127 SMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRC 186
Query: 231 KL------------ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
E F N+++A Y K + A + F + E+D++SWN ++A S
Sbjct: 187 GAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALS 246
Query: 279 HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
+ L + +M + GVR D T+ S L ACA L+S++ GKQ+HA +IR + D
Sbjct: 247 QSGRVREALDMVVDMQS-KGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDP 305
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
V +ALV +YAK G + +FN + RN V+W +I+ + +++LF QM+A
Sbjct: 306 YVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAE 365
Query: 399 GIKPDSVTFIGLLTAC 414
+ D L++ C
Sbjct: 366 LMTLDQFALATLISGC 381
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 123/329 (37%), Gaps = 74/329 (22%)
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
N N ++ Y+K + +A + F + +D+ SWNT ++ Y L F M
Sbjct: 70 NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 129
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
P+ FT A + +C L Q+ A + + D V ALV+M+ +CG +
Sbjct: 130 RSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAV 189
Query: 355 SCSYK-------------------------------LFNEMLHRNVVSWNTIIAAHANHR 383
+ + LF+ M R+VVSWN +++A +
Sbjct: 190 DLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSG 249
Query: 384 LGGSALKLFEQMKATGIKPDSVTFIGLLTACNH--------------------------- 416
AL + M++ G++ DS T+ LTAC
Sbjct: 250 RVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVAS 309
Query: 417 --------AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP- 467
+G KE + FNS+ ++ +T LI + G E+ E +
Sbjct: 310 ALVELYAKSGCFKEAKGVFNSLHDRNNVA-----WTVLISGFLQYGCFTESVELFNQMRA 364
Query: 468 --LGQDPIVLGTLLSACRLRRDVVIGERL 494
+ D L TL+S C R D+ +G +L
Sbjct: 365 ELMTLDQFALATLISGCCSRMDLCLGRQL 393
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 190/579 (32%), Positives = 309/579 (53%), Gaps = 7/579 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQP-DVIVSNHVLNLYAKCGKMILARKVFD 61
S++SL+ T+ + G + HA ++K P + NH++N+Y+K + A+ +
Sbjct: 7 NSLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLS 66
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
R++V+W+A+I+G Q G AL FS M + PN++ F A A ++S +
Sbjct: 67 LTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLV 126
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+Q+HA ++K G S FVG S MY K G + +A ++ E E N+ ++NA ++ V
Sbjct: 127 GKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVL 186
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ + F +G P+ +F L C+ ++ LR G LH ++ E++ V
Sbjct: 187 EGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSV 246
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N ++ Y K + +G +E F I + + +SW + I + + EK VF + G
Sbjct: 247 ANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLR-ARKEG 305
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ P DF +S+L+ACAGL+ ++ GK +H ++ + ++ VG+ALV+MY KCG I +
Sbjct: 306 IEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAE 365
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG--IKPDSVTFIGLLTACNH 416
+ F+EM RN+V+WN +I +A+ A+ LF++M + P+ VTF+ +L+AC+
Sbjct: 366 RAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSR 425
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
AG V G F SM YGI P EH+ C++DLLGRAG + +A ++ KK P+ V G
Sbjct: 426 AGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWG 485
Query: 477 TLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSG 536
LL A ++ +G+ A LF L P + +VLLSN++A+ G W + RK +KD G
Sbjct: 486 ALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVG 545
Query: 537 LKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+KK S I F + SH + EI ML L
Sbjct: 546 IKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKL 584
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 188/606 (31%), Positives = 315/606 (51%), Gaps = 36/606 (5%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+++ L+ C K L+ +HA ++ G+ V+ +++ + + A K+FD+
Sbjct: 37 QTLHYLIDQCISLKQLKH---VHAQIILHGLATQVLTLGKLVSSSVQLRDLRYAHKLFDQ 93
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
+ + N ++ +I G+ + + + +L + +M +LPN++ + ACA G
Sbjct: 94 IPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLG 153
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+HA S K G S + V N+++++Y+ G + A V+ + E LVS+N++I G+ +
Sbjct: 154 VCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKM 213
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ E+ +F+ M GL PD F+ G L + + + G +H V +E + V
Sbjct: 214 GRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVT 273
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN---- 295
N +M +Y+K + A+ F + +KD++SW I A ++ + L F +M
Sbjct: 274 NALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVV 333
Query: 296 --------------------------DHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
D GV +D T +IL++C+ + + GKQ H+++
Sbjct: 334 SWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYI 393
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
+ + NA+++MYAKCG + + +F M +N VSWN II A A H G A+
Sbjct: 394 FDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAI 453
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
++FE+M+A+G+ PD +TF GLL+AC+H+GLV G+ YF M T+GISPD+EH+ C++DL
Sbjct: 454 EMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDL 513
Query: 450 LGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPY 509
LGR G L EA KK P+ D +V LL ACR ++ IG+++ KQL L + Y
Sbjct: 514 LGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQLLELGRYNSGLY 573
Query: 510 VLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEIN 569
VLLSN+Y+ W D+ K+L +G+KK + S IE+ G +F V + H I
Sbjct: 574 VLLSNMYSESQRWDDMKNIWKILDQNGIKKCRAISFIEIDGCCYQFMVDDKRHGASTSIY 633
Query: 570 YMLKTL 575
ML L
Sbjct: 634 SMLGQL 639
>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 178/548 (32%), Positives = 300/548 (54%), Gaps = 7/548 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S +L CS+++ +G +H ++K G PD V ++++YAKCG++ +R VFDE +
Sbjct: 107 SHVLKACSESRNFDEGRKVHCQIVKFG-NPDSFVFTGLVDMYAKCGEIECSRSVFDENLD 165
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
RN+ SWS+MI+G+ Q L F++M + N+ + AC + +L +G+ +
Sbjct: 166 RNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEANQITLGILVHACKKLGALHQGKWL 225
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H Y +K G S++ +L+ +Y K G DA V+ E ++VS+ A+I G+ +N P
Sbjct: 226 HGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCP 285
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E+ ++F + +LP+ + A CS +L G +H L++K +P V N++
Sbjct: 286 EEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLG-SRDPIVTNSL 344
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ Y+K + +A F I ++D+++WN+ I+A S + L +F +M V PD
Sbjct: 345 VDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMG-SVLPD 403
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLI-RMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
T S+L+ACA L ++Q G HA+ + R L+ +V VG AL+ YAKCG + +F
Sbjct: 404 AVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIF 463
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ M ++ V+W+ +I+ + G +L +F M +KP+ F +L+AC+H G++
Sbjct: 464 DGMDQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIG 523
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
EG F + + Y + P +H+TC++DLL RAG+L EA ++ +K P+ D + G L
Sbjct: 524 EGWRLFTMICQDYNLVPSTKHYTCMVDLLARAGRLKEALDFIQKMPVQPDVSLFGAFLHG 583
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
C L +GE K++ L P YVL+ NLYASD W V R+++K GL K P
Sbjct: 584 CGLHSRFDLGELAIKRMLELHPGDACYYVLMCNLYASDARWSKVKQVRELMKQRGLMKTP 643
Query: 542 SYSMIEVQ 549
S++E+
Sbjct: 644 GCSLMEMD 651
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 227/436 (52%), Gaps = 6/436 (1%)
Query: 22 ISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQA 81
+ +HA ++ G+ D+ S +++LY G++ LAR VFD + + +SW +I +
Sbjct: 22 MEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLN 81
Query: 82 GEHLLALEFFSQMHLLPNE---YIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVG 138
E + F+++M + E +F+ + AC+ ++ +G+++H +KFG SFV
Sbjct: 82 SEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFGNPD-SFVF 140
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL 198
L+ MY K G + V+ E + N+ S++++IAG+V+N + G +F M + +
Sbjct: 141 TGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIE 200
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKA 258
++ + + C L +G LH +KC +E ++ ++ LY+K ++ +A
Sbjct: 201 ANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSV 260
Query: 259 FRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
F + D++SW I + E+ L +F + V P+D T AS+ ++C+ L +
Sbjct: 261 FDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQ-KEQVAVLPNDVTIASVFSSCSQLLN 319
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA 378
+ G+ IH I++ ++D V N+LV+ YAKC + + +F + R+VV+WN+II+A
Sbjct: 320 LNLGRSIHGLSIKLG-SRDPIVTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISA 378
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISP 438
+ + AL+LF QM+ + PD+VT + +L+AC ++ G ++ K +S
Sbjct: 379 FSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSS 438
Query: 439 DIEHFTCLIDLLGRAG 454
++ T L+ + G
Sbjct: 439 NVYVGTALLTFYAKCG 454
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 117/249 (46%), Gaps = 3/249 (1%)
Query: 212 SVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
S+ +++ M +H V L + +++LY F + A F I D +SW
Sbjct: 13 SLCDNINTLMEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWK 72
Query: 272 TFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
I +++ + + M D+ F+ +L AC+ + G+++H +++
Sbjct: 73 VIIRWYFLNSEFRDIVGFYNRMRVCLK-ECDNVVFSHVLKACSESRNFDEGRKVHCQIVK 131
Query: 332 MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
N D V LV+MYAKCG I CS +F+E L RNV SW+++IA + + L L L
Sbjct: 132 FG-NPDSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVL 190
Query: 392 FEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLG 451
F +M+ I+ + +T L+ AC G + +G+ + K GI T L+DL
Sbjct: 191 FNRMREELIEANQITLGILVHACKKLGALHQGKWLHGYLIKC-GIELGSYLVTALLDLYA 249
Query: 452 RAGKLLEAE 460
+ G + +A
Sbjct: 250 KCGVVRDAR 258
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMILARKVF 60
A ++ S+L C+ ALQ G S HA +K G + +V V +L YAKCG AR +F
Sbjct: 404 AVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIF 463
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLV 117
D M +++ V+WSAMISG+ G +L F M L PNE IF S +SAC+ +
Sbjct: 464 DGMDQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIG 523
Query: 118 KGQQI 122
+G ++
Sbjct: 524 EGWRL 528
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 177/580 (30%), Positives = 312/580 (53%), Gaps = 6/580 (1%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
+A+S +S+L K LQQ +HA ++ G+ + +SN ++N Y CG + A+++F
Sbjct: 23 LAQSHASILRKLKDLKPLQQ---IHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIF 79
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLV 117
+N+VSW+ +ISG + + A++ F +M + PN +S + A A + +
Sbjct: 80 HHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIR 139
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+ +H + ++ G+ FV +L+ MY K G A ++ E N+VS+NA+++G+
Sbjct: 140 IAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYS 199
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
++ E+ ++F LM R+GLL D ++ + L+ G +H ++ E++
Sbjct: 200 DHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKH 259
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+ +M +Y N + +A + F + KD+ +W + S +++ + F +M
Sbjct: 260 IKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQ 319
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
++ D IL++C+ ++Q G+++HA I+ ++ VG+A+++MYA CG + +
Sbjct: 320 NLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDA 379
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+ F M ++VV WN +IA + + G A+ LF QMK +G+ PD TF+ +L AC+HA
Sbjct: 380 KRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHA 439
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
G+V EG F M KT P+++H+ C+ID+LGRAG+L A + P D V T
Sbjct: 440 GMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYST 499
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL ACR+ ++ +G +++++F ++P YVLLSN+YA G W V R L+ L
Sbjct: 500 LLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRL 559
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
KK+P +S IE+ F E H + +I +LK L L
Sbjct: 560 KKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLIL 599
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 170/492 (34%), Positives = 281/492 (57%), Gaps = 2/492 (0%)
Query: 85 LLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISM 144
L L+ L P ++ + I+ACA ++L +++HA+ +A +F+ NSLI +
Sbjct: 36 LRDLDLLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHL 95
Query: 145 YMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSF 204
Y K G +A V+ E ++VS+ +LIAG+ +N PE+ + ML+ P+ F+F
Sbjct: 96 YCKCGSVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTF 155
Query: 205 AGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE 264
A L+ D G +H L VKC + +VG+ ++ +Y++ ++ A F ++
Sbjct: 156 ASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDS 215
Query: 265 KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ 324
K+ +SWN I+ + D E L F EM + G FT++S+ ++ A L +++ GK
Sbjct: 216 KNGVSWNALISGFARKGDGETALMTFAEMLRN-GFEATHFTYSSVFSSIARLGALEQGKW 274
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
+HAH+I+ R GN L++MYAK G + + K+F+ + +++V+WNT++ A A + L
Sbjct: 275 VHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGL 334
Query: 385 GGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFT 444
G A+ FE+M+ +GI + VTF+ +LTAC+H GLVKEG+ YF M K Y + P+I+HF
Sbjct: 335 GKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMM-KEYDLEPEIDHFV 393
Query: 445 CLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPT 504
++ LLGRAG L A + K P+ V G LL+ACR+ ++ +G+ A +F L P
Sbjct: 394 TVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPD 453
Query: 505 TTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSK 564
+ P VLL N+YAS G W A R+++K +G+KKEP+ S +E++ + F + +H +
Sbjct: 454 DSGPPVLLYNIYASTGQWDAAARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPR 513
Query: 565 IGEINYMLKTLS 576
EI M +S
Sbjct: 514 AEEIYKMWGQIS 525
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 191/381 (50%), Gaps = 8/381 (2%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C+++K L+ +HA + D + N +++LY KCG ++ ARKVFDEM +++VSW
Sbjct: 61 CAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDMVSW 120
Query: 72 SAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
+++I+G+ Q A+ M PN + FAS + A G+QIHA ++K
Sbjct: 121 TSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVK 180
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
+ +VG++L+ MY + G A V+ + N VS+NALI+GF E
Sbjct: 181 CDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMT 240
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
F MLR G F+++ + L +G +H +K + + F GNT++ +Y+K
Sbjct: 241 FAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAK 300
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
+ +A K F +++KDL++WNT + A + ++ +S F+EM G+ + TF
Sbjct: 301 SGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKS-GIYLNQVTFLC 359
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK-LFNEMLHR 367
IL AC+ V+ GK+ + L ++ +V + + GL++ + +F +
Sbjct: 360 ILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEP 419
Query: 368 NVVSWNTIIAA---HANHRLG 385
W ++AA H N ++G
Sbjct: 420 TAAVWGALLAACRMHKNAKVG 440
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+ ++ AL+QG +HA ++K + N +L++YAK G MI ARKVFD +
Sbjct: 255 TYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRV 314
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
+++LV+W+ M++ Q G A+ F +M + N+ F ++AC+
Sbjct: 315 DDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACS 365
>gi|297737195|emb|CBI26396.3| unnamed protein product [Vitis vinifera]
Length = 667
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 182/559 (32%), Positives = 305/559 (54%), Gaps = 9/559 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L C+K +L+ LH+ +L G Q V V ++++Y+KC AR VFD+M ++
Sbjct: 34 VLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCFHSARLVFDQMPIKS 93
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEY---IFASAISACAGIQSLVKGQQIHA 124
LVSW+++IS H + + QM LL E F +++C SL +G IH
Sbjct: 94 LVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTGFLASC----SLPQGLSIHG 149
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
Y K G + NS++SMY+++ AL V+ + ++VS+ ++ G++ K
Sbjct: 150 YITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWTIILGGYLSAGDVAK 209
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
F VF M Q + PD F + C +S +L M++H L +K + + N ++A
Sbjct: 210 VFAVFNQMRCQCVGPDSIVFVNLISCCKLSGNLLLAMLVHSLLLKSGFDHKDPIDNLLVA 269
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y+K + A + F + EK + W + I+ + + L +F + RP++
Sbjct: 270 MYAKCKDLVSARRVFDAVHEKSVFLWTSMISGYAQFGYPNEALHLFNMLLRT-ASRPNEL 328
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T A++L+ACA + S++ G++I +++ L D+ V +L++M+ KCG I + LF +
Sbjct: 329 TLATVLSACAEMGSLRMGEEIEQYILLNGLGSDLRVQTSLIHMFCKCGSIKKAQALFERI 388
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMK-ATGIKPDSVTFIGLLTACNHAGLVKEG 423
++++ W+ +I +A H +G AL LF +M+ GIKPD++ + +L AC+H+GL+++G
Sbjct: 389 PNKDLAVWSAMINGYAVHGMGKEALNLFHKMQNEVGIKPDAIVYTSVLLACSHSGLIEDG 448
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
YF SM+K +GI P I+H++CL+DLLGRAG + A ++ P+ V LSAC
Sbjct: 449 LKYFRSMQKDFGIEPSIQHYSCLVDLLGRAGYVELALRTIQEMPVLVQARVWAPFLSACY 508
Query: 484 LRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSY 543
++ +GE AK LF L+P +T +VL++NLY S G W + A AR ++ GL KEP +
Sbjct: 509 THHNLELGEFAAKNLFDLEPRSTGNFVLMTNLYTSMGKWKEAAKARSIINARGLVKEPGW 568
Query: 544 SMIEVQGTFEKFTVAEFSH 562
S IE+ G SH
Sbjct: 569 SQIEIDGAVHVLAAEGQSH 587
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 179/369 (48%), Gaps = 6/369 (1%)
Query: 99 NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY 158
+E+ F + ACA + SL ++H++ L G+ + FV +L+ +Y K A LV+
Sbjct: 27 SEFTFPFVLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCFHSARLVF 86
Query: 159 GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLR 218
+ +LVS+N++I+ + ++ F + K M GL +F G L CS L
Sbjct: 87 DQMPIKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTGFLASCS----LP 142
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
+G+ +H K L+ + + N+IM++Y + N I A F + +K ++SW +
Sbjct: 143 QGLSIHGYITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWTIILGGYL 202
Query: 279 HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
D K +VF +M V PD F ++++ C ++ +H+ L++ +
Sbjct: 203 SAGDVAKVFAVFNQM-RCQCVGPDSIVFVNLISCCKLSGNLLLAMLVHSLLLKSGFDHKD 261
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
+ N LV MYAKC + + ++F+ + ++V W ++I+ +A AL LF + T
Sbjct: 262 PIDNLLVAMYAKCKDLVSARRVFDAVHEKSVFLWTSMISGYAQFGYPNEALHLFNMLLRT 321
Query: 399 GIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLE 458
+P+ +T +L+AC G ++ GE + G+ D+ T LI + + G + +
Sbjct: 322 ASRPNELTLATVLSACAEMGSLRMGEEIEQYILLN-GLGSDLRVQTSLIHMFCKCGSIKK 380
Query: 459 AEEYTKKFP 467
A+ ++ P
Sbjct: 381 AQALFERIP 389
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 137/282 (48%), Gaps = 16/282 (5%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+L+ C + L + +H+ +LK G + N ++ +YAKC ++ AR+VFD + E+
Sbjct: 231 NLISCCKLSGNLLLAMLVHSLLLKSGFDHKDPIDNLLVAMYAKCKDLVSARRVFDAVHEK 290
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIH 123
++ W++MISG+ Q G AL F+ + PNE A+ +SACA + SL G++I
Sbjct: 291 SVFLWTSMISGYAQFGYPNEALHLFNMLLRTASRPNELTLATVLSACAEMGSLRMGEEIE 350
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
Y L G S V SLI M+ K G A ++ +L ++A+I G+ + +
Sbjct: 351 QYILLNGLGSDLRVQTSLIHMFCKCGSIKKAQALFERIPNKDLAVWSAMINGYAVHGMGK 410
Query: 184 KGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
+ +F M + G+ PD + L CS S G+I L ++ + + +I
Sbjct: 411 EALNLFHKMQNEVGIKPDAIVYTSVLLACSHS-----GLIEDGLKYFRSMQKDFGIEPSI 465
Query: 243 MALYSKFNLIGEA---EKAFRLIEEKDLI----SWNTFIAAC 277
+L+G A E A R I+E ++ W F++AC
Sbjct: 466 QHYSCLVDLLGRAGYVELALRTIQEMPVLVQARVWAPFLSAC 507
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 109/225 (48%), Gaps = 9/225 (4%)
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
G+ F+F L+ C+ L LH + +++ FV ++ +YSK A
Sbjct: 23 GVHGSEFTFPFVLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCFHSA 82
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADY--EKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
F + K L+SWN+ I+A HC D+ ++ + K+M G+ TF LA+C
Sbjct: 83 RLVFDQMPIKSLVSWNSIISA--HCRDFHIDQSFGILKQM-QLLGLELSSATFTGFLASC 139
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
S+ G IH ++ ++ L+ + + N++++MY + I + +F + +++VSW
Sbjct: 140 ----SLPQGLSIHGYITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWT 195
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
I+ + + +F QM+ + PDS+ F+ L++ C +G
Sbjct: 196 IILGGYLSAGDVAKVFAVFNQMRCQCVGPDSIVFVNLISCCKLSG 240
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 33/236 (13%)
Query: 289 VFKEM----SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNAL 344
+FK++ S+ GV +FTF +L ACA L S++ ++H+H++ V V AL
Sbjct: 10 IFKQIPSLSSHTSGVHGSEFTFPFVLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTAL 69
Query: 345 VNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDS 404
V++Y+KC + +F++M +++VSWN+II+AH + + +QM+ G++ S
Sbjct: 70 VDVYSKCCCFHSARLVFDQMPIKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSS 129
Query: 405 VTFIGLLTACN-------HAGLVKEG----EAYFNSMEKTYGISPDIE---------HFT 444
TF G L +C+ H + K G NS+ Y I+ H
Sbjct: 130 ATFTGFLASCSLPQGLSIHGYITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFYTLHQK 189
Query: 445 CLIDLLGRAGKLLEAEEYTKKFP---------LGQDPIVLGTLLSACRLRRDVVIG 491
++ G L A + K F +G D IV L+S C+L ++++
Sbjct: 190 SIVSWTIILGGYLSAGDVAKVFAVFNQMRCQCVGPDSIVFVNLISCCKLSGNLLLA 245
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 63/112 (56%), Gaps = 4/112 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++++L C++ +L+ G + +L G+ D+ V +++++ KCG + A+ +F+ +
Sbjct: 329 TLATVLSACAEMGSLRMGEEIEQYILLNGLGSDLRVQTSLIHMFCKCGSIKKAQALFERI 388
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACA 111
++L WSAMI+G+ G AL F +M + P+ ++ S + AC+
Sbjct: 389 PNKDLAVWSAMINGYAVHGMGKEALNLFHKMQNEVGIKPDAIVYTSVLLACS 440
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 181/576 (31%), Positives = 308/576 (53%), Gaps = 34/576 (5%)
Query: 34 QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQ 93
+P + N +L Y K + A ++FD M ER++VSW+ M+S Q+G AL+
Sbjct: 221 EPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVD 280
Query: 94 MH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGY 150
M + + + S+++ACA + SL G+Q+HA ++ +V ++L+ +Y K G
Sbjct: 281 MQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGC 340
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
+A V+ + N V++ LI+GF++ + E+F M + + D+F+ A +
Sbjct: 341 FKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISG 400
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
C DL G LH L +K V N+++++Y+K + + AE FR + EKD++SW
Sbjct: 401 CCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSW 460
Query: 271 NTFIAACSHCADY-------------------------------EKGLSVFKEMSNDHGV 299
+ I A S + E GL ++K M ++ V
Sbjct: 461 TSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYV 520
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
RPD T+ ++ CA L + + G QI +++ L D V NA++ MY+KCG I + K
Sbjct: 521 RPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARK 580
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F+ + +++VSWN +I ++ H +G A+++F+ + G KPD ++++ +L+ C+H+GL
Sbjct: 581 VFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGL 640
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V+EG+ YF+ M++ + ISP +EHF+C++DLLGRAG L EA++ P+ V G LL
Sbjct: 641 VQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALL 700
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
SAC++ + + E AK +F L + Y+L++ +YA G D A RK+++D G+KK
Sbjct: 701 SACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKK 760
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P YS +EV F + SH ++ I L L
Sbjct: 761 NPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDEL 796
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/495 (23%), Positives = 225/495 (45%), Gaps = 69/495 (13%)
Query: 34 QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQ 93
P+VI N +LN YAK G++ A ++F M R++ SW+ ++SG+ Q+ ++L++LE F
Sbjct: 88 HPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLS 147
Query: 94 MHL----LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
MH PN + A A+ +C + Q+ A KF S V +L+ M+++ G
Sbjct: 148 MHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCG 207
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVE-----------NQQPEKGFEVFKLML----- 193
A ++ EP + N+++AG+V+ + PE+ + +M+
Sbjct: 208 AVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQ 267
Query: 194 ---------------RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+G+ D ++ L C+ + LR G LH ++ +P+V
Sbjct: 268 SGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYV 327
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
+ ++ LY+K EA+ F + +++ ++W I+ + + + +F +M +
Sbjct: 328 ASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAEL- 386
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC------- 351
+ D F A++++ C + G+Q+H+ ++ Q V V N+L++MYAKC
Sbjct: 387 MTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAE 446
Query: 352 ------------------------GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGS 387
G ++ + + F+ M +NV++WN ++ A+ H
Sbjct: 447 AIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEED 506
Query: 388 ALKLFEQMKATG-IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCL 446
L++++ M + ++PD VT++ L C G K G+ K G+ D +
Sbjct: 507 GLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKV-GLIIDTSVANAV 565
Query: 447 IDLLGRAGKLLEAEE 461
I + + G++LEA +
Sbjct: 566 ITMYSKCGRILEARK 580
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 214/450 (47%), Gaps = 51/450 (11%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ + +S L C++ +L+ G LHA V++ D V++ ++ LYAK G A+ VF+
Sbjct: 290 STTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFN 349
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
+ +RN V+W+ +ISG Q G ++E F+QM + +++ A+ IS C L
Sbjct: 350 SLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCL 409
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMK------------------------------- 147
G+Q+H+ LK G V NSLISMY K
Sbjct: 410 GRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQ 469
Query: 148 VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL-PDRFSFAG 206
VG + A + E N++++NA++ ++++ E G ++K+ML + + PD ++
Sbjct: 470 VGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVT 529
Query: 207 GLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKD 266
+ C+ + G + TVK L + V N ++ +YSK I EA K F + KD
Sbjct: 530 LFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKD 589
Query: 267 LISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
++SWN I S ++ + +F ++ G +PD ++ ++L+ C+ VQ GK
Sbjct: 590 IVSWNAMITGYSQHGMGKQAIEIFDDILK-RGAKPDYISYVAVLSGCSHSGLVQEGK--- 645
Query: 327 AHLIRMRLNQDVGVG----NALVNMYAKCGLISCSYKLFNEMLHRNVVS-WNTIIAA--- 378
+ M+ ++ G + +V++ + G ++ + L ++M + W +++A
Sbjct: 646 FYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKI 705
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFI 408
H N+ L A K ++ + PDS +++
Sbjct: 706 HGNNELAELAAKHVFELDS----PDSGSYM 731
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 165/376 (43%), Gaps = 65/376 (17%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYM---------------- 146
FA A+ +C +L + +H + G AS F+ N+L+ Y+
Sbjct: 27 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 86
Query: 147 ----------------KVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFK 190
K+G SDA+ ++G ++ S+N L++G+ +++Q E F
Sbjct: 87 AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFL 146
Query: 191 LMLRQG-LLPDRFSFAGGLEICSV-------------------SNDLRKGMILHCLTVKC 230
M R G P+ F+ A ++ C +D L + V+C
Sbjct: 147 SMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRC 206
Query: 231 KL------------ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
E F N+++A Y K + A + F + E+D++SWN ++A S
Sbjct: 207 GAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALS 266
Query: 279 HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
+ L + +M + GVR D T+ S L ACA L+S++ GKQ+HA +IR + D
Sbjct: 267 QSGRVREALDMVVDMQS-KGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDP 325
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
V +ALV +YAK G + +FN + RN V+W +I+ + +++LF QM+A
Sbjct: 326 YVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAE 385
Query: 399 GIKPDSVTFIGLLTAC 414
+ D L++ C
Sbjct: 386 LMTLDQFALATLISGC 401
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 124/329 (37%), Gaps = 74/329 (22%)
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
N N ++ Y+K + +A + F + +D+ SWNT ++ Y L F M
Sbjct: 90 NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 149
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
P+ FT A + +C L Q+ A + + D V ALV+M+ +CG +
Sbjct: 150 RSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAV 209
Query: 355 SCSYKLF-----------NEML--------------------HRNVVSWNTIIAAHANHR 383
+ +LF N ML R+VVSWN +++A +
Sbjct: 210 DLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSG 269
Query: 384 LGGSALKLFEQMKATGIKPDSVTFIGLLTACNH--------------------------- 416
AL + M++ G++ DS T+ LTAC
Sbjct: 270 RVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVAS 329
Query: 417 --------AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP- 467
+G KE + FNS+ ++ +T LI + G E+ E +
Sbjct: 330 ALVELYAKSGCFKEAKGVFNSLHDRNNVA-----WTVLISGFLQYGCFTESVELFNQMRA 384
Query: 468 --LGQDPIVLGTLLSACRLRRDVVIGERL 494
+ D L TL+S C R D+ +G +L
Sbjct: 385 ELMTLDQFALATLISGCCSRMDLCLGRQL 413
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 189/556 (33%), Positives = 300/556 (53%), Gaps = 37/556 (6%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
++H+ ++ ++ + + ++ YA + ARKVFDE+ ERN++ + MI + G
Sbjct: 61 TVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNG 120
Query: 83 EHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
+ ++ F M H+ P+ Y F + AC+ ++V G++IH + K G +S FVGN
Sbjct: 121 FYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGN 180
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
L+SMY K G+ S+A LV E ++VS+N+L+AG+ +NQ+ + EV + M
Sbjct: 181 GLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREM------- 233
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
E +S+D G + L P V NT N++ + F
Sbjct: 234 ---------ESVKISHD--AGTMASLL---------PAVSNTTTE-----NVMYVKDMFF 268
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
++ +K L+SWN I A + + ++ M D G PD + S+L AC +++
Sbjct: 269 KM-GKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEAD-GFEPDAVSITSVLPACGDTSAL 326
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
GK+IH ++ R +L ++ + NAL++MYAKCG + + +F M R+VVSW +I+A+
Sbjct: 327 SLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAY 386
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
G A+ LF +M+ +G+ PDS+ F+ L AC+HAGL++EG + F M Y I+P
Sbjct: 387 GFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPR 446
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLF 499
+EH C++DLLGRAGK+ EA ++ ++ P+ + V G LL ACR+ + IG A +LF
Sbjct: 447 LEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLF 506
Query: 500 HLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAE 559
L P + YVLLSN+YA G W +V R ++K GLKK P S +EV F V +
Sbjct: 507 QLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGD 566
Query: 560 FSHSKIGEINYMLKTL 575
SH + EI L L
Sbjct: 567 RSHPQSAEIYRELDVL 582
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 179/396 (45%), Gaps = 45/396 (11%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L CS + + G +H + K+G+ + V N ++++Y KCG + AR V DEMS R+
Sbjct: 147 VLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRD 206
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSL 127
+VSW+++++G+ Q ALE +M + IS AG + +
Sbjct: 207 VVSWNSLVAGYAQNQRFDDALEVCREME--------SVKISHDAGTMASL---------- 248
Query: 128 KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE 187
+ V N+ M Y D G+ +LVS+N +I +++N P + E
Sbjct: 249 ------LPAVSNTTTENVM---YVKDMFFKMGKK---SLVSWNVMIGVYMKNAMPVEAVE 296
Query: 188 VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYS 247
++ M G PD S L C ++ L G +H + KL N + N ++ +Y+
Sbjct: 297 LYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYA 356
Query: 248 KFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFA 307
K + A F ++ +D++SW I+A +++F +M D G+ PD F
Sbjct: 357 KCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKM-QDSGLVPDSIAFV 415
Query: 308 SILAACAGLASVQHGKQ-----IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+ LAAC+ ++ G+ + I RL +V++ + G + +YK
Sbjct: 416 TTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLA----CMVDLLGRAGKVKEAYKFIQ 471
Query: 363 EM-LHRNVVSWNTIIAA---HANHRLG-GSALKLFE 393
EM + N W ++ A H+N +G +A KLF+
Sbjct: 472 EMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQ 507
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A SI+S+L C T AL G +H + + + P++++ N ++++YAKCG + AR VF+
Sbjct: 310 AVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFE 369
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
M R++VSW+AMIS + +G A+ FS+M L+P+ F + ++AC+ L +
Sbjct: 370 NMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEE 429
Query: 119 GQ 120
G+
Sbjct: 430 GR 431
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 108/240 (45%), Gaps = 19/240 (7%)
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
E+ + + F +L L ++ + +H+ +I L + +G L+ YA
Sbjct: 32 ELDQKNSPKETAFMLGQVLDTYPDLKTL---RTVHSRIISEDLRYNSSLGVKLMRAYASL 88
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
++ + K+F+E+ RNV+ N +I ++ N+ +++F M + +KPD TF +L
Sbjct: 89 KDVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVL 148
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA----EEYTKKFP 467
AC+ +G + G+ S K G+S + L+ + G+ G L EA +E +++
Sbjct: 149 KACSCSGNIVIGKKIHGSATKV-GLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDV 207
Query: 468 LGQDPIVLG--------TLLSACRLRRDVVIGE---RLAKQLFHLQPTTTSPYVLLSNLY 516
+ + +V G L CR V I +A L + TTT + + +++
Sbjct: 208 VSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMF 267
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 180/573 (31%), Positives = 313/573 (54%), Gaps = 2/573 (0%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVL-KMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+++L C+ +AL++G ++H+ + G++ DVI+ N +L +YAKCG + A+++F+ MS
Sbjct: 125 TTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMS 184
Query: 65 -ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
R++ SW+AMI+ + Q+G A+ + M + P+ F S +SAC+ + L +G++IH
Sbjct: 185 GRRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVEPSVRTFTSVLSACSNLGLLDQGRKIH 244
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A G + N+L++MY + DA ++ ++VS++A+IA F E +
Sbjct: 245 ALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFD 304
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ E + M +G+ P+ ++FA L C+ DLR G +H + + G ++
Sbjct: 305 EAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALV 364
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
LY+ + + EA F IE +D W I S L +++EM N V
Sbjct: 365 DLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATK 424
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
++ +++ACA L + +Q H+ + + D + +LVNMY++ G + + ++F++
Sbjct: 425 IIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDK 484
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M R+ ++W T+IA +A H G AL L+++M+ G +P +TF+ +L AC+HAGL ++G
Sbjct: 485 MSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQG 544
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
+ F S++ Y + P+I H++C+IDLL RAG+L +AEE P+ + + +LL A R
Sbjct: 545 KQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASR 604
Query: 484 LRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSY 543
+ +DV A Q+ L P + YVLLSN++A G +A R + G+KK
Sbjct: 605 IHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGS 664
Query: 544 SMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
S IEV +F V + SH + EI L+ LS
Sbjct: 665 SWIEVADQIHEFNVGDNSHPRFQEIFAELQRLS 697
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 233/450 (51%), Gaps = 13/450 (2%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH 95
+V + N ++ Y KCG + AR FD ++ +N SW +M++ + Q G + AL+ + +M
Sbjct: 57 NVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRMD 116
Query: 96 LLPNEYIFASAISACAGIQSLVKGQQIHAY-SLKFGYASISFVGNSLISMYMKVGYSSDA 154
L PN ++ + + ACA I++L +G+ IH+ S G + NSL++MY K G DA
Sbjct: 117 LQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDA 176
Query: 155 LLVYGE-AFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSV 213
++ + ++ S+NA+IA + ++ E+ +++ M + P +F L CS
Sbjct: 177 KRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSN 233
Query: 214 SNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTF 273
L +G +H L E + + N ++ +Y++ + +A K F+ + +D++SW+
Sbjct: 234 LGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAM 293
Query: 274 IAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR 333
IAA + +++ + + +M + GVRP+ +TFAS+L ACA + ++ G+ +H ++
Sbjct: 294 IAAFAETDLFDEAIEFYSKMQLE-GVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNG 352
Query: 334 LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN--HRLGGSALKL 391
+ G ALV++Y G + + LF+++ +R+ W +I ++ HR G L+L
Sbjct: 353 YKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTG--VLEL 410
Query: 392 FEQMKATGIKPDS-VTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLL 450
+ +MK T P + + + +++AC G + + +E G+ D T L+++
Sbjct: 411 YREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEAD-GMISDFVLATSLVNMY 469
Query: 451 GRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
R G L A + K +D + TL++
Sbjct: 470 SRWGNLESARQVFDKMS-SRDTLAWTTLIA 498
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 189/387 (48%), Gaps = 7/387 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++ +S+L CS L QG +HA + G + D+ + N +L +YA+C + A K+F
Sbjct: 222 RTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQR 281
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKG 119
+ R++VSWSAMI+ + A+EF+S+M L PN Y FAS + ACA + L G
Sbjct: 282 LPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAG 341
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ +H L GY G +L+ +Y G +A ++ + + + LI G+ +
Sbjct: 342 RAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQ 401
Query: 180 QQPEKGFEVFKLMLRQGLLP-DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
E+++ M +P + ++ + C+ H + S+ +
Sbjct: 402 GHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVL 461
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
+++ +YS++ + A + F + +D ++W T IA + ++ L ++KEM + G
Sbjct: 462 ATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELE-G 520
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHL-IRMRLNQDVGVGNALVNMYAKCGLISCS 357
P + TF +L AC+ + GKQ+ + ++ ++ + ++++ ++ G +S +
Sbjct: 521 AEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDA 580
Query: 358 YKLFNEM-LHRNVVSWNTIIAAHANHR 383
+L N M + N V+W++++ A H+
Sbjct: 581 EELINAMPVEPNDVTWSSLLGASRIHK 607
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 132/250 (52%), Gaps = 11/250 (4%)
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
+N F+GN I+ Y K + A AF I K+ SW + + A + Y L ++K M
Sbjct: 56 ANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM 115
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCG 352
++P+ + ++L ACA + +++ GK IH+ + + L DV + N+L+ MYAKCG
Sbjct: 116 D----LQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCG 171
Query: 353 LISCSYKLFNEML-HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
+ + +LF M R+V SWN +IAA+A A++L+E M ++P TF +L
Sbjct: 172 SLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDMD---VEPSVRTFTSVL 228
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQD 471
+AC++ GL+ +G +++ + G D+ L+ + R L +A + ++ P +D
Sbjct: 229 SACSNLGLLDQGRK-IHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPR-RD 286
Query: 472 PIVLGTLLSA 481
+ +++A
Sbjct: 287 VVSWSAMIAA 296
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 185/549 (33%), Positives = 304/549 (55%), Gaps = 7/549 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+L + ++QG LH LK G+ +V+N +L +Y K + AR+VFDEM
Sbjct: 209 TVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEM 268
Query: 64 SERNLVSWSAMISGH---HQAGEHL-LALEFFSQMHLLPNEYIFASAISACAGIQSLVKG 119
R+ V+++ MI G+ E + + LE Q P+ S + AC ++ L
Sbjct: 269 VVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQFK--PDILTVTSVLCACGHLRDLSLA 326
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ I+ Y L+ G+ S V N LI +Y K G A V+ + VS+N++I+G++++
Sbjct: 327 KYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQS 386
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ ++FK+M+ D ++ + + + DL+ G LH +K + + V
Sbjct: 387 GDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVS 446
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N ++ +Y+K +G++ K F + D ++WNT I+AC D+ GL V +M + V
Sbjct: 447 NALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNK-V 505
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
PD TF L CA LA+ + GK+IH L+R ++ +GNAL+ MY+KCG + S++
Sbjct: 506 VPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFR 565
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F M R+VV+W +I A+ + G AL+ F M+ +GI PDSV FI L+ AC+H+GL
Sbjct: 566 VFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGL 625
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V++G A F M+ Y I P IEH+ C++DLL R+ K+ +AEE+ + P+ D + ++L
Sbjct: 626 VEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVL 685
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
ACR D+ ER+++++ L P +L SN YA+ W V+ RK ++D +KK
Sbjct: 686 RACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSVRDKHIKK 745
Query: 540 EPSYSMIEV 548
P YS IE+
Sbjct: 746 NPGYSWIEI 754
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 240/456 (52%), Gaps = 6/456 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S++ C+ + G ++ +L+MG + D+ V N ++++Y++ G + AR+VFDEM
Sbjct: 108 TFPSVIKACAGLFDAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEM 167
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
R+LVSW+++ISG+ G + ALE + ++ ++P+ + +S + A A + + +GQ
Sbjct: 168 PVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQ 227
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H ++LK G S+S V N L++MY+K +DA V+ E + V++N +I G+++ +
Sbjct: 228 GLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLE 287
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E+ ++F L Q PD + L C DL ++ ++ V N
Sbjct: 288 MVEESVKMFLENLDQ-FKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKN 346
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y+K + A F +E KD +SWN+ I+ D + + +FK M +
Sbjct: 347 ILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE-Q 405
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D T+ +++ LA ++ GK +H++ I+ + D+ V NAL++MYAKCG + S K+
Sbjct: 406 ADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKI 465
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN M + V+WNT+I+A + L++ QM+ + PD TF+ L C
Sbjct: 466 FNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAK 525
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+ G+ + + +G +++ LI++ + G L
Sbjct: 526 RLGKEIHCCLLR-FGYESELQIGNALIEMYSKCGCL 560
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 248/492 (50%), Gaps = 12/492 (2%)
Query: 13 SKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE-RNLVSW 71
S + L + +HA V+ +G+ S +++ Y+ + VF +S +N+ W
Sbjct: 15 SSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIW 74
Query: 72 SAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
+++I + G ALEF+ ++ + P++Y F S I ACAG+ G ++ L+
Sbjct: 75 NSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILE 134
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
G+ S +VGN+L+ MY ++G S A V+ E +LVS+N+LI+G+ + E+ E+
Sbjct: 135 MGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEI 194
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
+ + ++PD F+ + L + +++G LH T+K + S V N ++A+Y K
Sbjct: 195 YHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLK 254
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
F+ +A + F + +D +++NT I E+ + +F E N +PD T S
Sbjct: 255 FSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLE--NLDQFKPDILTVTS 312
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
+L AC L + K I+ +++R + V N L+++YAKCG + + +FN M ++
Sbjct: 313 VLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKD 372
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
VSWN+II+ + A+KLF+ M + D +T++ L++ +K G+ +
Sbjct: 373 TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHS 432
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF-PLGQ-DPIVLGTLLSACRLRR 486
+ K+ GI D+ LID+ + G E + K F +G D + T++SAC
Sbjct: 433 NGIKS-GIYIDLSVSNALIDMYAKCG---EVGDSLKIFNSMGTLDTVTWNTVISACVRFG 488
Query: 487 DVVIGERLAKQL 498
D G ++ Q+
Sbjct: 489 DFATGLQVTTQM 500
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 197/583 (33%), Positives = 294/583 (50%), Gaps = 50/583 (8%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKC---GKMILAR 57
+ K + SLL + +K L Q I +HA ++K + + V +L C ++ AR
Sbjct: 2 IGKKVMSLLQNATK---LNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYAR 58
Query: 58 KVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLP-NEYIFASAISACAGI 113
VFDE+ + W+ MI + + ++ F QM +P + Y + I AC +
Sbjct: 59 SVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRL 118
Query: 114 QSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALI 173
+ GQ++H LK G S FV +LI MY K G A + E P+LV +N L+
Sbjct: 119 KDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLL 178
Query: 174 AGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE 233
A +V + ++F M + L+
Sbjct: 179 AEYVRVGEINLAHDLFDRMPERDLVS---------------------------------- 204
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
NT++ ++ +G A+K F E+DLISW++ IAA + + L +F EM
Sbjct: 205 -----WNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEM 259
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
+ V PD T S+L+AC + ++ GK IH + R R+ D+ +G +LV+MYAKCG
Sbjct: 260 QLAN-VLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGD 318
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
I S ++FN M +R+V +W+ +I ANH G AL F +M + IKP+ VTFIG+L+A
Sbjct: 319 IDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSA 378
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C+H GLV EG YF SM K Y +SP IEH+ C++D+LGRAG+L EA E K P D I
Sbjct: 379 CSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAI 438
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
V LL ACR+ ++V I E L L+P YVLLSN+Y+ W V R+M+K
Sbjct: 439 VWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMK 498
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
+ ++K P S IEV +F + SH + +I ML ++
Sbjct: 499 NINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEIT 541
>gi|449522624|ref|XP_004168326.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial-like [Cucumis sativus]
Length = 616
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 184/580 (31%), Positives = 308/580 (53%), Gaps = 15/580 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
++L + ++ + LH+ V+K+G+ ++ V N +L +Y KC + AR +FDEM+ R
Sbjct: 21 NVLKAAAPVNSIPRDTLLHSLVVKLGLINELSVQNKLLRVYVKCRDLDSARTLFDEMARR 80
Query: 67 NLVSWSAMISGHHQAG--------EHLLALEFFSQMHLL--PNEYIFASAISACAGIQSL 116
N+VSW+ +I G G +H + L F + L P+ F +C + +
Sbjct: 81 NVVSWNTVICGLVDGGYGGEFKMRQHSIFLYFKKMLMGLVDPDGITFNGLFRSCVVLNDV 140
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G+Q+H++ +K G+ FVG++++ Y K G DA L + +LV +N ++
Sbjct: 141 ESGRQLHSFVMKIGFDLDCFVGSAVVDFYAKCGLYEDARLAFSCILYRDLVLWNVMLYCC 200
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
V N + EVF+LM +G D F+F+ L +C G LHCL +K + +
Sbjct: 201 VFNSLSREAIEVFRLMQLEGFKGDDFTFSSLLSLCKYKGSGELGKQLHCLLIKQSFDLDI 260
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM-SN 295
V ++++ +Y+K + + +A K F + ++ +SW T I ++ + +F+ M
Sbjct: 261 LVASSLVNVYAKNDNLYDARKVFDEMPTRNSVSWTTMIVGYGQHEYGKEAVKLFRRMLRK 320
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
D+ PD+ TFAS+L++C + Q+H+ LI++ + + N L+ Y+KCG+I+
Sbjct: 321 DYC--PDELTFASLLSSCGFTSGASELMQVHSCLIKLGFEAFLSINNGLIYAYSKCGIIA 378
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ + F + ++V+W +II A L A+KLF++M + GI+PD + F+G+L+AC+
Sbjct: 379 AALQCFRLVAEPDLVTWTSIICGLALCGLEKDAVKLFDKMLSYGIRPDKIAFLGVLSACS 438
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
H G V G YFN M Y + PD EH TCLIDLLGRAG L +A + K P P L
Sbjct: 439 HGGFVSMGLHYFNLMTNQYQLVPDSEHLTCLIDLLGRAGSLDQAFDLLKSMPKEAGPDAL 498
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
+ ACR ++ + +R + F +P Y L+SN+YAS+G W DVA RK++ D
Sbjct: 499 RAFIRACRTHGNLRLAKRAME--FASEPDEPVNYSLVSNMYASEGRWSDVARMRKLINDR 556
Query: 536 GLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+K P S +E+ G F + SH + ++ ML L
Sbjct: 557 CEQKTPGLSWVEIAGYNHLFISGDRSHPQSLDLYAMLGLL 596
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 179/369 (48%), Gaps = 13/369 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + L C ++ G LH+ V+K+G D V + V++ YAKCG AR F +
Sbjct: 126 TFNGLFRSCVVLNDVESGRQLHSFVMKIGFDLDCFVGSAVVDFYAKCGLYEDARLAFSCI 185
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
R+LV W+ M+ A+E F M L +++ F+S +S C S G+
Sbjct: 186 LYRDLVLWNVMLYCCVFNSLSREAIEVFRLMQLEGFKGDDFTFSSLLSLCKYKGSGELGK 245
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H +K + V +SL+++Y K DA V+ E N VS+ +I G+ +++
Sbjct: 246 QLHCLLIKQSFDLDILVASSLVNVYAKNDNLYDARKVFDEMPTRNSVSWTTMIVGYGQHE 305
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
++ ++F+ MLR+ PD +FA L C ++ + M +H +K E+ + N
Sbjct: 306 YGKEAVKLFRRMLRKDYCPDELTFASLLSSCGFTSGASELMQVHSCLIKLGFEAFLSINN 365
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ YSK +I A + FRL+ E DL++W + I + C + + +F +M + +G+R
Sbjct: 366 GLIYAYSKCGIIAAALQCFRLVAEPDLVTWTSIICGLALCGLEKDAVKLFDKMLS-YGIR 424
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA-----LVNMYAKCGLIS 355
PD F +L+AC+ V G H + NQ V ++ L+++ + G +
Sbjct: 425 PDKIAFLGVLSACSHGGFVSMG----LHYFNLMTNQYQLVPDSEHLTCLIDLLGRAGSLD 480
Query: 356 CSYKLFNEM 364
++ L M
Sbjct: 481 QAFDLLKSM 489
>gi|242077664|ref|XP_002448768.1| hypothetical protein SORBIDRAFT_06g032835 [Sorghum bicolor]
gi|241939951|gb|EES13096.1| hypothetical protein SORBIDRAFT_06g032835 [Sorghum bicolor]
Length = 598
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 175/506 (34%), Positives = 280/506 (55%), Gaps = 6/506 (1%)
Query: 37 VIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL 96
V + NH+L Y KC +V DEM RN VSWSA I+G Q G AL F +M L
Sbjct: 77 VFLHNHLLIAYFKCRLHRRGLRVLDEMPHRNAVSWSAAIAGLAQGGRPRDALALFIRMRL 136
Query: 97 L---PNEYIFASAISACAGIQSLVK-GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSS 152
PNE+ ASA++A + + +Q++A S++ G+ S F+ N+ ++ + G
Sbjct: 137 AGCPPNEFALASALNASSFAPAGTGCARQLYALSVRLGFDSSVFLTNAFLAAMARHGQLE 196
Query: 153 DALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
DA+ ++ + ++VS+N L+AGF + +G+ +++ M+R+ + D FSF+ L +
Sbjct: 197 DAVRLFNGSSVRDIVSWNTLLAGFARHWS-VQGWILWRRMVREAVRADGFSFSTVLSGLA 255
Query: 213 VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNT 272
S L G+ +H VK + +VGN+++ +Y K + + AF I KD++SW
Sbjct: 256 ASTSLASGLQVHAQLVKSGFGDDVYVGNSLVEMYMKSKCLADGTMAFAEIRCKDVVSWTG 315
Query: 273 FIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
A C HC + K + + +M D GV P+ +TFA+ ACA L + G+++H ++I++
Sbjct: 316 MAAGCLHCGEPSKAIGILSQMMLD-GVMPNSYTFATSANACASLTDLDEGRKVHGYVIKL 374
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
+ D+GV NAL++MYAKCG ++C++K+F M R V+SW +I A++ A+++F
Sbjct: 375 GDDSDIGVNNALIDMYAKCGSVACAHKVFQSMQQRPVISWTAMIMGFAHNGRAQEAVEVF 434
Query: 393 EQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
+ M G+ P+ VT I +L AC+ G V EG YFN+ME +GI P +H+ C++DLLG+
Sbjct: 435 DDMLLKGVAPNRVTMICILYACSQGGFVDEGWIYFNAMEDKFGIQPGEDHYACMVDLLGK 494
Query: 453 AGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLL 512
AG + EAEE + P +V LL AC + +G R A+ L+ S Y+LL
Sbjct: 495 AGHIEEAEELISRMPFPPGVLVWQALLGACHRHGNEAVGRRAAEHALALENDDPSTYMLL 554
Query: 513 SNLYASDGMWGDVAGARKMLKDSGLK 538
N A W AR ++ LK
Sbjct: 555 CNTLAGQHDWDGARRARGLMGAEILK 580
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 142/279 (50%), Gaps = 5/279 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S S++L + + +L G+ +HA ++K G DV V N ++ +Y K + F E+
Sbjct: 246 SFSTVLSGLAASTSLASGLQVHAQLVKSGFGDDVYVGNSLVEMYMKSKCLADGTMAFAEI 305
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+++VSW+ M +G GE A+ SQM L +PN Y FA++ +ACA + L +G+
Sbjct: 306 RCKDVVSWTGMAAGCLHCGEPSKAIGILSQMMLDGVMPNSYTFATSANACASLTDLDEGR 365
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H Y +K G S V N+LI MY K G + A V+ + ++S+ A+I GF N
Sbjct: 366 KVHGYVIKLGDDSDIGVNNALIDMYAKCGSVACAHKVFQSMQQRPVISWTAMIMGFAHNG 425
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI-LHCLTVKCKLESNPFVG 239
+ ++ EVF ML +G+ P+R + L CS + +G I + + K ++
Sbjct: 426 RAQEAVEVFDDMLLKGVAPNRVTMICILYACSQGGFVDEGWIYFNAMEDKFGIQPGEDHY 485
Query: 240 NTIMALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAAC 277
++ L K I EAE+ R+ ++ W + AC
Sbjct: 486 ACMVDLLGKAGHIEEAEELISRMPFPPGVLVWQALLGAC 524
>gi|222630191|gb|EEE62323.1| hypothetical protein OsJ_17112 [Oryza sativa Japonica Group]
Length = 591
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 195/574 (33%), Positives = 307/574 (53%), Gaps = 22/574 (3%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLK-----------MGIQPDVIVSNHVLNLYAKCGKMI 54
S LL C + L+ G +LHAAV+K ++ ++ N ++++YA+CG+
Sbjct: 15 SGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNSLVSMYARCGRRE 74
Query: 55 LARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISAC 110
A +VFDEM R+ VSW+++I+ AG+ AL F +M + F + +S C
Sbjct: 75 DAARVFDEMRVRDAVSWNSLIAASRGAGD---ALALFRRMLRSDARACDRATFTTVLSEC 131
Query: 111 A--GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVS 168
A G SL +H + G+ + VGN+L++ Y + G + A V+ E N+++
Sbjct: 132 ARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNVIT 191
Query: 169 FNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV 228
+ A+I+G + ++ F +F M+R + + +++ L C+ S R+G +H L V
Sbjct: 192 WTAMISGMARAELYKESFSLFGQMIRT-VDANNATYSCALLACARSLAAREGQQVHGLVV 250
Query: 229 KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLS 288
K E + V + +M +YSK L+ +A FR E D + + + EK
Sbjct: 251 KAGFEDDLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAFE 310
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMY 348
+F EM G D+ T +++L A A GKQIHA +I+ + V N LVNMY
Sbjct: 311 LFAEMVG-AGNEIDENTVSAVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVNMY 369
Query: 349 AKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
+KCG + S ++F+EM +N VSWN+IIAA A H G +LFE MKA G KP VTF+
Sbjct: 370 SKCGELRESVRVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFL 429
Query: 409 GLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
LL AC+H G K+G NSM YG+ P +EH+ C++D+LGRAG L +A+ + + P
Sbjct: 430 SLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIEDGPF 489
Query: 469 GQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGA 528
+ ++ L+ AC + +G+ A++L L P+ T+ YVLLSN+Y+S+G W D A
Sbjct: 490 TDNALLWQALMGACSFHGNSEVGKYAAEKLLLLDPSCTAAYVLLSNIYSSEGRWDDRAKV 549
Query: 529 RKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
K + + GL+K+ S IE++ F V SH
Sbjct: 550 MKRMSEMGLRKDTGKSWIELEKEVHSFVVRSTSH 583
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 129/269 (47%), Gaps = 18/269 (6%)
Query: 204 FAGGLEICSVSNDLRKGMILHCLTVKCK-----LESNPFVGNTIMA---LYSKFNLIGEA 255
F+G L C DLR G LH VK S P++ + ++A L S + G
Sbjct: 14 FSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNSLVSMYARCGRR 73
Query: 256 EKAFRLIEE---KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
E A R+ +E +D +SWN+ IAA D L++F+ M D TF ++L+
Sbjct: 74 EDAARVFDEMRVRDAVSWNSLIAASRGAGD---ALALFRRMLRSDARACDRATFTTVLSE 130
Query: 313 C--AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVV 370
C AG AS+ +H ++ +V VGNALV Y +CG + + ++F+ M +NV+
Sbjct: 131 CARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNVI 190
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSM 430
+W +I+ A L + LF QM T + ++ T+ L AC + +EG+ +
Sbjct: 191 TWTAMISGMARAELYKESFSLFGQMIRT-VDANNATYSCALLACARSLAAREGQQVHGLV 249
Query: 431 EKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
K G D+ + L+D+ + G + +A
Sbjct: 250 VKA-GFEDDLHVESGLMDVYSKCGLMEDA 277
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 70/131 (53%), Gaps = 4/131 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++S++L + G +HA V+K + V N ++N+Y+KCG++ + +VFDEM
Sbjct: 326 TVSAVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVNMYSKCGELRESVRVFDEM 385
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+N VSW+++I+ + G + F M P + F S + AC+ + S KG
Sbjct: 386 PSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGL 445
Query: 121 QI-HAYSLKFG 130
+I ++ S ++G
Sbjct: 446 EILNSMSSQYG 456
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 194/618 (31%), Positives = 318/618 (51%), Gaps = 54/618 (8%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER---NL 68
C+ +L G SLHA V + G +V V N V+++Y KCG + A +FD++ R +L
Sbjct: 269 CANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDL 328
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQM---HLL-PNEYIFASAISACAGIQSLVKGQQIHA 124
VSW++++S + A + AL F +M HL+ P+ + + ACA + + ++G+Q+H
Sbjct: 329 VSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHG 388
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG------------------------- 159
+S++ G FVGN+++ MY K G +A V+
Sbjct: 389 FSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEH 448
Query: 160 ----------EAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
E E ++V++ A+I G+ + Q + +VF+ M G P+ + L
Sbjct: 449 ALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLS 508
Query: 210 ICSVSNDLRKGMILHCLTVKCKLE-SNPFVG-------NTIMALYSKFNLIGEAEKAFRL 261
C L G HC +K L P G N ++ +Y+K A K F
Sbjct: 509 ACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDS 568
Query: 262 I--EEKDLISWNTFIAACSHCADYEKGLSVFKEM-SNDHGVRPDDFTFASILAACAGLAS 318
+ +++D+++W I + D L +F M D ++P+DFT + L ACA LA+
Sbjct: 569 VSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAA 628
Query: 319 VQHGKQIHAHLIRMRLNQD-VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
++ G+Q+HA+++R + V N L++MY+K G + + +F+ M RN VSW +++
Sbjct: 629 LRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMT 688
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
+ H G AL++F++M+ + PD +TF+ +L AC+H+G+V G +FN M K +G+
Sbjct: 689 GYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVD 748
Query: 438 PDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQ 497
P EH+ C++DL GRAG+L EA + + P+ P+V LLSACRL +V +GE A +
Sbjct: 749 PGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANR 808
Query: 498 LFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTV 557
L L+ Y LLSN+YA+ W DVA R +K +G+KK P S I+ + F V
Sbjct: 809 LLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYV 868
Query: 558 AEFSHSKIGEINYMLKTL 575
+ SH + +I L L
Sbjct: 869 GDRSHPQSQQIYETLADL 886
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 203/457 (44%), Gaps = 53/457 (11%)
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
S ++ W+ +I G + QM L P+ Y F ACA + SL G
Sbjct: 220 SPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGA 279
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE---PNLVSFNALIAGFV 177
+HA + G+AS FV N+++SMY K G A ++ + +LVS+N++++ ++
Sbjct: 280 SLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYM 339
Query: 178 ENQQPEKGFEVF-KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
+F K+ R + PD S L C+ +G +H +++ L +
Sbjct: 340 WASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDV 399
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN- 295
FVGN ++ +Y+K + EA K F+ ++ KD++SWN + S E LS+F+ M+
Sbjct: 400 FVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEE 459
Query: 296 ---------------------------------DHGVRPDDFTFASILAACAGLASVQHG 322
D G RP+ T S+L+AC + ++ HG
Sbjct: 460 NIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHG 519
Query: 323 KQIHAHLIRMRLN--------QDVGVGNALVNMYAKCGLISCSYKLFNEM--LHRNVVSW 372
K+ H + I+ LN D+ V N L++MYAKC + K+F+ + R+VV+W
Sbjct: 520 KETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTW 579
Query: 373 NTIIAAHANHRLGGSALKLFEQM--KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSM 430
+I +A H +AL+LF M IKP+ T L AC ++ G +
Sbjct: 580 TVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYV 639
Query: 431 EKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+ + S + CLID+ ++G + A+ P
Sbjct: 640 LRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMP 676
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 205/445 (46%), Gaps = 71/445 (15%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+ ++L C+ A +G +H ++ G+ DV V N V+++YAKCGKM A KVF M
Sbjct: 366 SLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRM 425
Query: 64 SERNLVSWSAMISGHHQAG--EHLL---------------------------------AL 88
+++VSW+AM++G+ QAG EH L AL
Sbjct: 426 KFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEAL 485
Query: 89 EFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKF---------GYASISF 136
+ F QM PN S +SAC + +L+ G++ H Y++KF G +
Sbjct: 486 DVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKV 545
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEP---NLVSFNALIAGFVENQQPEKGFEVFKLML 193
+ N LI MY K + A ++ ++ P ++V++ +I G+ ++ ++F M
Sbjct: 546 I-NGLIDMYAKCQSTEVARKMF-DSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMF 603
Query: 194 R--QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES-NPFVGNTIMALYSKFN 250
+ + + P+ F+ + L C+ LR G +H ++ S FV N ++ +YSK
Sbjct: 604 KMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSG 663
Query: 251 LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
+ A+ F + +++ +SW + + E L VF EM V PD TF +L
Sbjct: 664 DVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLV-PDGITFLVVL 722
Query: 311 AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA------LVNMYAKCGLISCSYKLFNEM 364
AC+ V HG R+++D GV +V+++ + G + + KL NEM
Sbjct: 723 YACSHSGMVDHGINFFN-----RMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEM 777
Query: 365 -LHRNVVSWNTIIAA---HANHRLG 385
+ V W +++A H+N LG
Sbjct: 778 PMEPTPVVWVALLSACRLHSNVELG 802
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 122/249 (48%), Gaps = 11/249 (4%)
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
WN I H +++++M + G PD +TF + ACA L+S+ G +HA +
Sbjct: 227 WNQLIRRALHLGSPRDVFTLYRQMKS-LGWTPDHYTFPFVFKACANLSSLSLGASLHATV 285
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR---NVVSWNTIIAAHANHRLGG 386
R +V V NA+V+MY KCG + ++ +F+++ HR ++VSWN++++A+
Sbjct: 286 SRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDAN 345
Query: 387 SALKLFEQMKATGI-KPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
+AL LF +M + PD ++ + +L AC G + G+ D+
Sbjct: 346 TALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQ-VHGFSIRSGLVDDVFVGNA 404
Query: 446 LIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS----ACRLRRDVVIGERLAKQLFHL 501
++D+ + GK+ EA + ++ +D + +++ A RL + + ER+ ++ L
Sbjct: 405 VVDMYAKCGKMEEANKVFQRMKF-KDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIEL 463
Query: 502 QPTTTSPYV 510
T + +
Sbjct: 464 DVVTWTAVI 472
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 191/557 (34%), Positives = 296/557 (53%), Gaps = 37/557 (6%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAG 112
A VF + E N +SW+ MI GH + + + AL + M L PN Y F +CA
Sbjct: 31 AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDA----------------LL 156
++ +G+QIHA LK+G V SLISMY + G DA +
Sbjct: 91 SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150
Query: 157 VYGEAFEPNL---------------VSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDR 201
+ G A N+ VS+NA+I+G+ E + ++ E+F M++ + PD
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDE 210
Query: 202 FSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRL 261
+ A L C+ S ++ G +H SN + N ++ LYSK + A F
Sbjct: 211 STMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEG 270
Query: 262 IEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQH 321
++ KD+ISWNT I ++ +++ L VF+EM G P+D T SIL ACA L ++
Sbjct: 271 LQYKDVISWNTLIGGYAYINHHKEALLVFQEMLK-LGETPNDVTMLSILPACAHLGAIDI 329
Query: 322 GKQIHAHLIRMR--LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
G+ IH ++ + + + + +L++MYAKCG I + ++F+ +L++++ S N +I
Sbjct: 330 GRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGF 389
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
A H +A L +MK GI+PD +TF+GLL+AC+HAGL G F SM Y I P
Sbjct: 390 AMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPK 449
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLF 499
+EH+ C+IDLLGR+G EAEE + D ++ G+LL AC++ +++ +GE +A++L
Sbjct: 450 LEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLM 509
Query: 500 HLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAE 559
++P YVLLSN+YA+ W DVA R +L D GLKK P S IE+ +F + +
Sbjct: 510 KIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGD 569
Query: 560 FSHSKIGEINYMLKTLS 576
H + EI ML+ +
Sbjct: 570 KFHPQNKEIYKMLEEID 586
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 202/422 (47%), Gaps = 48/422 (11%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCG---------------- 51
L C+K+KA Q+G +HA +LK G+ D+ V ++++YA+ G
Sbjct: 84 LFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRD 143
Query: 52 ---------------KMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQ--- 93
M A+K+FDE+ +++VSW+AMISG+ + G + ALE F++
Sbjct: 144 VVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMK 203
Query: 94 MHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSD 153
M + P+E A+ +S C ++ G+QIH++ G+ S + N+LI +Y K G
Sbjct: 204 MDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMER 263
Query: 154 ALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSV 213
A ++ +++S+N LI G+ ++ VF+ ML+ G P+ + L C+
Sbjct: 264 AHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAH 323
Query: 214 SNDLRKGMILHCLTVKCKLE---SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
+ G +H K KL+ +N + +++ +Y+K I A + F I K L S
Sbjct: 324 LGAIDIGRWIHVYIDK-KLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSC 382
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC--AGLASVQHGKQIHAH 328
N I + + + M D G+ PDD TF +L+AC AGL+ + G++I
Sbjct: 383 NAMIFGFAMHGRADAAFDLLSRMKKD-GIEPDDITFVGLLSACSHAGLSDL--GRKIFKS 439
Query: 329 L-IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAA---HANHR 383
+ + R+ + ++++ + GL + +L N M + + V W +++ A H N
Sbjct: 440 MTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLE 499
Query: 384 LG 385
LG
Sbjct: 500 LG 501
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 156/321 (48%), Gaps = 11/321 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++++L C+ + ++ G +H+ + G ++ + N +++LY+KCG+M A +F+ +
Sbjct: 212 TMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGL 271
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
++++SW+ +I G+ H AL F +M L PN+ S + ACA + ++ G+
Sbjct: 272 QYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGR 331
Query: 121 QIHAYSLK--FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
IH Y K G + + + SLI MY K G A V+ +L S NA+I GF
Sbjct: 332 WIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAM 391
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS---VSNDLRKGMILHCLTVKCKLESN 235
+ + + F++ M + G+ PD +F G L CS +S+ RK I +T+ ++E
Sbjct: 392 HGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRK--IFKSMTLDYRIEPK 449
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFR-LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
++ L + L EAE+ + E D + W + + AC + E G + +++
Sbjct: 450 LEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLM 509
Query: 295 NDHGVRPDDFTFASILAACAG 315
P + S + A +
Sbjct: 510 KIEPKNPGSYVLLSNIYATSA 530
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 119/242 (49%), Gaps = 33/242 (13%)
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
F+ + A F+ I+E + +SWNT I + +D L+++ M + G+ P+ +TF
Sbjct: 25 FHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMIS-LGLSPNSYTFPF 83
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR- 367
+ +CA + Q GKQIHA +++ L D+ V +L++MYA+ G++ ++K+F+ HR
Sbjct: 84 LFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRD 143
Query: 368 ------------------------------NVVSWNTIIAAHANHRLGGSALKLFEQMKA 397
+VVSWN +I+ +A AL+LF +M
Sbjct: 144 VVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMK 203
Query: 398 TGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLL 457
+KPD T +L+ C H+G V+ G +S +G +++ LIDL + G++
Sbjct: 204 MDVKPDESTMATVLSTCTHSGNVELGRQ-IHSWIDNHGFGSNLKLVNALIDLYSKCGEME 262
Query: 458 EA 459
A
Sbjct: 263 RA 264
>gi|297736926|emb|CBI26127.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 199/577 (34%), Positives = 295/577 (51%), Gaps = 48/577 (8%)
Query: 48 AKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFA 104
AK G++ AR++FDEM ++ V+W+AM++ + Q G H AL F M + P+ + F
Sbjct: 16 AKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANSRPDRFTFT 75
Query: 105 SAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEP 164
+ +SACAG+ L +G +IHA + G S VGNSLI MY K ++ A V+ E
Sbjct: 76 ATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFEEMSIM 135
Query: 165 NLVSF-------------------------------NALIAGFVENQQPEKGFEVFKLML 193
N VS+ N +I+G+ + E +FK M
Sbjct: 136 NEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCLGLFKKMR 195
Query: 194 RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES-----------NPFVGNTI 242
L PD+++F+ + + G ++H +K + N +
Sbjct: 196 EDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWDDVMKVFESIGILTQVSWNAM 255
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ + K EA F+L EK+++SW + I + E+ LS F +M +H ++PD
Sbjct: 256 IDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMMENH-IQPD 314
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
DFTF ++L AC+ LA++ HGK IH +I + V VGN LVNMYAKCG I S F
Sbjct: 315 DFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFK 374
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
E+L +++VSWN ++ H AL+L+E+M A+G+KPD VTFIGLL C+H+GL+++
Sbjct: 375 EILGKDLVSWNAMLFGLGMHGHATQALELYEEMVASGMKPDKVTFIGLLMTCSHSGLIEK 434
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP-LGQDPIVLG-TLLS 480
G+A F SM YG+S + EH C++DLLGR G L +A E ++ G+ L LL
Sbjct: 435 GQALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQARELVDEYSRTGRAETSLPEALLG 494
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC +V +G L + L +P YVLLSNLY G W + RK + D G+KK
Sbjct: 495 ACFAHSEVRMGANLGEYLKVFEPQKEMSYVLLSNLYCVSGQWKEAEMVRKTMTDHGVKKM 554
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
P S IEV+ F SH + E+ +L L
Sbjct: 555 PGCSWIEVRNKVTVFVAGNHSHPYMEELCKILNFLKF 591
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 208/448 (46%), Gaps = 56/448 (12%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++ L C+ L++G+ +HA V+ G Q + V N ++++Y KC AR+VF+EM
Sbjct: 73 TFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFEEM 132
Query: 64 SERNLVSWSA-------------------------------MISGHHQAGEHLLALEFFS 92
S N VSW + MISG+ Q G+ L L F
Sbjct: 133 SIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCLGLFK 192
Query: 93 QMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV-----------G 138
+M L P+++ F++ ++A +Q G +H + +K G+ + V
Sbjct: 193 KMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWDDVMKVFESIGILTQVSW 252
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL 198
N++I +MK+G + +A LV+ A E N+VS+ ++I G+ N E+ F M+ +
Sbjct: 253 NAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMMENHIQ 312
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKA 258
PD F+F L CS L G ++H + + VGN ++ +Y+K I + A
Sbjct: 313 PDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTA 372
Query: 259 FRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
F+ I KDL+SWN + + L +++EM G++PD TF +L C+
Sbjct: 373 FKEILGKDLVSWNAMLFGLGMHGHATQALELYEEMVAS-GMKPDKVTFIGLLMTCSHSGL 431
Query: 319 VQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
++ G+ + ++ + L+Q+ +V++ + G ++ + +L +E + A
Sbjct: 432 IEKGQALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQARELVDEYSRTGRAETSLPEA 491
Query: 378 ------AHANHRLG---GSALKLFEQMK 396
AH+ R+G G LK+FE K
Sbjct: 492 LLGACFAHSEVRMGANLGEYLKVFEPQK 519
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 173/386 (44%), Gaps = 45/386 (11%)
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
F S I K+G + A ++ E + V++NA++A + + ++ +F M
Sbjct: 6 FQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIA 65
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF------ 249
PDRF+F L C+ +LR+GM +H V +S+ VGN+++ +Y K
Sbjct: 66 NSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSA 125
Query: 250 -------------------------NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYE 284
L A F + +K I+WN I+ C D E
Sbjct: 126 RRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVE 185
Query: 285 KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR------MRLNQDV 338
L +FK+M D ++PD +TF++++ A L +G +H +I+ M++ + +
Sbjct: 186 LCLGLFKKMRED-SLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWDDVMKVFESI 244
Query: 339 GV-----GNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFE 393
G+ NA+++ + K G ++ +F +NVVSW ++I +A + G AL F
Sbjct: 245 GILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFV 304
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 453
+M I+PD TF +L AC+ + G+ S+ YG ++ L+++ +
Sbjct: 305 KMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIH-YGFHAYVDVGNGLVNMYAKC 363
Query: 454 GKLLEAEEYTKKFPLGQDPIVLGTLL 479
G + + K+ LG+D + +L
Sbjct: 364 GDIQGSNTAFKEI-LGKDLVSWNAML 388
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 110/219 (50%), Gaps = 6/219 (2%)
Query: 232 LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK 291
+ S+ F + + +K I A + F + KD ++WN +A+ S +++ L +F
Sbjct: 1 MHSHLFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFH 60
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
M + RPD FTF + L+ACAGL ++ G +IHA ++ + VGN+L++MY KC
Sbjct: 61 HMRIANS-RPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKC 119
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
+ + ++F EM N VSW +++ A+ + L A +F+ M K + + ++
Sbjct: 120 LSATSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMP----KKVEIAWNIMI 175
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLL 450
+ G V+ F M + + PD F+ L++ L
Sbjct: 176 SGYGQCGDVELCLGLFKKMRED-SLQPDQWTFSALVNAL 213
>gi|224058449|ref|XP_002299515.1| predicted protein [Populus trichocarpa]
gi|222846773|gb|EEE84320.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 181/529 (34%), Positives = 291/529 (55%), Gaps = 1/529 (0%)
Query: 40 SNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPN 99
SN V+++YA+CG+ + A KVFDE++E ++VSW+ I E + + L N
Sbjct: 12 SNAVMSMYARCGREVDAIKVFDEIAEPDVVSWTERIGTASDGHEAVELFRIVLSLGLDVN 71
Query: 100 EYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG 159
EY + +S G++ L G+QI A K GY + V N+L+SMY K G DA V+
Sbjct: 72 EYTLINVLSMIGGVKFLNAGKQIQALCHKTGYFQVVSVSNALVSMYGKCGQICDACRVFY 131
Query: 160 EAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRK 219
+ VS+N+LI+ EN + EVF M L P + A LE S SN+ ++
Sbjct: 132 NMIIRDSVSWNSLISACSENGFVNQALEVFYQMRELSLQPTIHTLASILEAVSNSNNTKQ 191
Query: 220 GMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSH 279
+ +H L VKC + + + ++ Y + N + E+++ F I++ +L+ NT I
Sbjct: 192 VIQIHSLVVKCGFMFDVSMISCLITAYGRCNSMDESKRVFAEIDKVNLVHLNTMITTFVR 251
Query: 280 CADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG 339
Y L++++ + + H + D TF+ IL AC+ + +Q G+ +H+ +++ +QD
Sbjct: 252 AGYYTDALALYQTIWSLHR-KVDSRTFSIILKACSAITDMQLGRAVHSLVLKTGFDQDSF 310
Query: 340 VGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG 399
V ++++++Y KCG I + K F ++ +WN ++ +A+H LF +M G
Sbjct: 311 VESSVIDIYCKCGSIGQAEKAFRSSSMNSLAAWNAMMMGYAHHGCYQEVFDLFNKMSQFG 370
Query: 400 IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
I+PD +T++G+L++C H GLVKE Y +SM + +GI P +EH+ C+IDLLGR G L +A
Sbjct: 371 IEPDEITYLGVLSSCCHGGLVKEARHYLDSMFELHGIIPHLEHYACMIDLLGRVGLLEDA 430
Query: 460 EEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASD 519
++ P+ D + LLSAC + V +G A++L + P S Y+LLSNLYAS
Sbjct: 431 KKTIDHMPIQPDVHIWQILLSACNIHGHVELGRVAARKLLEIHPENESAYILLSNLYASV 490
Query: 520 GMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
GMW V RK +K+ L+KEP S I+V F V + SH + EI
Sbjct: 491 GMWNAVGRLRKEMKEKNLRKEPGSSWIQVGRKSHTFFVNDTSHPQSKEI 539
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 187/388 (48%), Gaps = 10/388 (2%)
Query: 15 TKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAM 74
K L G + A K G V VSN ++++Y KCG++ A +VF M R+ VSW+++
Sbjct: 85 VKFLNAGKQIQALCHKTGYFQVVSVSNALVSMYGKCGQICDACRVFYNMIIRDSVSWNSL 144
Query: 75 ISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGY 131
IS + G ALE F QM L P + AS + A + + + QIH+ +K G+
Sbjct: 145 ISACSENGFVNQALEVFYQMRELSLQPTIHTLASILEAVSNSNNTKQVIQIHSLVVKCGF 204
Query: 132 ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKL 191
+ + LI+ Y + ++ V+ E + NLV N +I FV +++
Sbjct: 205 MFDVSMISCLITAYGRCNSMDESKRVFAEIDKVNLVHLNTMITTFVRAGYYTDALALYQT 264
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
+ D +F+ L+ CS D++ G +H L +K + + FV ++++ +Y K
Sbjct: 265 IWSLHRKVDSRTFSIILKACSAITDMQLGRAVHSLVLKTGFDQDSFVESSVIDIYCKCGS 324
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
IG+AEKAFR L +WN + +H Y++ +F +MS G+ PD+ T+ +L+
Sbjct: 325 IGQAEKAFRSSSMNSLAAWNAMMMGYAHHGCYQEVFDLFNKMSQ-FGIEPDEITYLGVLS 383
Query: 312 ACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCSYKLFNEM-LHRNV 369
+C V+ + + + + + ++++ + GL+ + K + M + +V
Sbjct: 384 SCCHGGLVKEARHYLDSMFELHGIIPHLEHYACMIDLLGRVGLLEDAKKTIDHMPIQPDV 443
Query: 370 VSWNTIIAA---HANHRLGG-SALKLFE 393
W +++A H + LG +A KL E
Sbjct: 444 HIWQILLSACNIHGHVELGRVAARKLLE 471
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+++ S +L CS +Q G ++H+ VLK G D V + V+++Y KCG + A K F
Sbjct: 274 SRTFSIILKACSAITDMQLGRAVHSLVLKTGFDQDSFVESSVIDIYCKCGSIGQAEKAFR 333
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFF---SQMHLLPNEYIFASAISAC 110
S +L +W+AM+ G+ G + + F SQ + P+E + +S+C
Sbjct: 334 SSSMNSLAAWNAMMMGYAHHGCYQEVFDLFNKMSQFGIEPDEITYLGVLSSC 385
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 203/619 (32%), Positives = 308/619 (49%), Gaps = 77/619 (12%)
Query: 34 QPDVIVSNHVLNLYAKCGKMILARKVFDEM--SERNLVSWSAMISGHHQAGEHLLALEFF 91
P + + +++ YA G++ + FD + + R+ V +AMIS +A A+ F
Sbjct: 86 DPGPVAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVF 145
Query: 92 -----SQMHLLPNEYIFASAISACAGIQSLVKGQ--QIHAYSLKFGYASISFVGNSLISM 144
S L P++Y F S +SA + L Q+H K G ++ V N+LI++
Sbjct: 146 RSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIAL 205
Query: 145 YMKV---GYSSDALLVYGEAFEPNL-------------------------------VSFN 170
YMK G + DA V E E + V +N
Sbjct: 206 YMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWN 265
Query: 171 ALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC 230
A+I+G+V++ + FE+F+ M+ + + PD F+F L C+ + G +H ++
Sbjct: 266 AMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRL 325
Query: 231 KLESNP----FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKG 286
+ + P V N ++ LYSK I A K F + KD++SWNT ++ +
Sbjct: 326 QPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNA 385
Query: 287 LSVFKEMSND-------------HG-----------------VRPDDFTFASILAACAGL 316
+FKEM HG V+P D+T+A +AAC L
Sbjct: 386 ARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGEL 445
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
+++HGKQ+HAHL++ GNAL+ MYA+CG + + +F M + + VSWN +I
Sbjct: 446 GALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMI 505
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
+A H G AL+LF+QM A GI PD ++F+ +LTACNHAGLV +G YF SME+ +GI
Sbjct: 506 SALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGI 565
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAK 496
SP +H+ LIDLLGRAG++ EA + K P P + +LS CR+ D+ +G A
Sbjct: 566 SPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAAD 625
Query: 497 QLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFT 556
QLF + P Y+LLSN Y++ G W D A RK+++D G+KKEP S IEV F
Sbjct: 626 QLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFL 685
Query: 557 VAEFSHSKIGEINYMLKTL 575
V + H E+ L+ +
Sbjct: 686 VGDTKHPDAHEVYRFLEMV 704
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 186/440 (42%), Gaps = 85/440 (19%)
Query: 17 ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKC---GKMILARKVFDEMSERNLVSWS- 72
A+ LH AV K+G + VSN ++ LY KC G ARKV DEM E++ ++W+
Sbjct: 176 AVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTT 235
Query: 73 ------------------------------AMISGHHQAGEHLLALEFFSQM---HLLPN 99
AMISG+ Q+G A E F +M + P+
Sbjct: 236 IVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPD 295
Query: 100 EYIFASAISACAGIQSLVKGQQIHAYSLK----FGYASISFVGNSLISMYMKVGYSSDAL 155
E+ F S +SACA + G+ +H ++ F + V N+L+++Y K G + A
Sbjct: 296 EFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVAT 355
Query: 156 LVYGEAFEPNLVSFNALIAGFVEN-----------QQP--------------------EK 184
++ ++VS+N +++G++E+ + P E
Sbjct: 356 KIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAED 415
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
++F M + + P +++AG + C L+ G LH V+C E++ GN ++
Sbjct: 416 ALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLT 475
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y++ + +A F ++ D +SWN I+A + L +F +M G+ PD
Sbjct: 476 MYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVA-QGIYPDRI 534
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA------LVNMYAKCGLISCSY 358
+F +IL AC V G Q + R D G+ L+++ + G I +
Sbjct: 535 SFLTILTACNHAGLVDDGFQYFESMER-----DFGISPGEDHYARLIDLLGRAGRIGEAR 589
Query: 359 KLFNEM-LHRNVVSWNTIIA 377
L M W I++
Sbjct: 590 DLIKTMPFEPTPAIWEAILS 609
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 140/315 (44%), Gaps = 49/315 (15%)
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIE--EK 265
L + ++S DL +L + + P ++++ Y+ + ++ F + +
Sbjct: 67 LHLYTLSPDLATPAVLF------RADPGPVAATSLVSAYAVAGRLRDSAAFFDSVPVARR 120
Query: 266 DLISWNTFIAACSHCADYEKGLSVFKEM-SNDHGVRPDDFTFASILAACAGL--ASVQHG 322
D + N I+A + + +SVF+ + ++D +RPDD++F S+L+A + +V H
Sbjct: 121 DTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHC 180
Query: 323 KQIHAHLIRMRLNQDVGVGNALVNMYAKC---GLISCSYKLFNEMLHRNVVSWNTIIAAH 379
Q+H + ++ + V NAL+ +Y KC G+ + K+ +EM ++ ++W TI+ H
Sbjct: 181 TQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGH 240
Query: 380 A-----------------------NHRLGG--------SALKLFEQMKATGIKPDSVTFI 408
N + G A +LF +M + I PD TF
Sbjct: 241 VRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFT 300
Query: 409 GLLTACNHAGLVKEGEAY---FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKK 465
LL+AC +AG G++ F ++ + + L+ L ++GK+ A +
Sbjct: 301 SLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDS 360
Query: 466 FPLGQDPIVLGTLLS 480
L +D + T+LS
Sbjct: 361 MTL-KDVVSWNTILS 374
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 13/208 (6%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C + AL+ G LHA +++ G + N +L +YA+CG + AR VF M + VSW
Sbjct: 442 CGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSW 501
Query: 72 SAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG-QQIHAYSL 127
+AMIS Q G ALE F QM + P+ F + ++AC + G Q +
Sbjct: 502 NAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMER 561
Query: 128 KFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
FG + LI + + G +A L+ FEP + A+++G N E G
Sbjct: 562 DFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGA 621
Query: 187 ----EVFKLMLRQG----LLPDRFSFAG 206
++FK++ LL + +S AG
Sbjct: 622 YAADQLFKMVPEHDGTYILLSNTYSAAG 649
>gi|224122888|ref|XP_002318941.1| predicted protein [Populus trichocarpa]
gi|222857317|gb|EEE94864.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 187/527 (35%), Positives = 298/527 (56%), Gaps = 8/527 (1%)
Query: 38 IVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM--- 94
I++ +L Y + G AR +FDEM ER++V+W+ MISG+ E+ A F M
Sbjct: 45 ILATDLLKSYFERGLTSQARNLFDEMPERDVVAWTTMISGYTHCNEYTQAWSVFVDMVKN 104
Query: 95 -HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGY-ASISFVGNSLISMYMKVGYS- 151
+ PN + +S + AC G++ + G+ +H ++K + +V N+L+ MY G
Sbjct: 105 GNDPPNAFTISSVLKACKGMKRVFCGRLVHGLAIKRRFMEGFIYVDNALMDMYASCGVGM 164
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
DA +V+ + E N+VS+ LIAG+ + ++F+ ML G+ + S + + C
Sbjct: 165 RDACVVFHDIKEKNVVSWTTLIAGYTHRGNGNRALQIFREMLLDGVALNPHSISIAVRAC 224
Query: 212 SVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
+ G +H +K ES+ V N+I+ +Y + + EA K F + EKDLI+WN
Sbjct: 225 ASIGSQNFGRQIHTAVIKHGFESDLPVTNSILDMYCRCGCLSEANKYFNDMTEKDLITWN 284
Query: 272 TFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
T IA +D + +F +M ++ G P+ FTF S++AACA A++Q G+Q+H + R
Sbjct: 285 TLIAGYER-SDSIEPFFIFSQMESE-GFSPNCFTFTSLVAACANAAALQCGQQVHGGIFR 342
Query: 332 MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
L+ ++ + NAL++MYAKCG I S K F+EM N+VSW +++ + H G A++L
Sbjct: 343 RGLDGNLELANALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMIGYGTHGYGKEAVEL 402
Query: 392 FEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLG 451
F++M +GI+PD V F+ +L AC+HAGLV +G Y N M Y I P+ E + C++DLLG
Sbjct: 403 FDEMVRSGIRPDQVVFMAVLHACSHAGLVDQGLRYINCMINDYHIKPNQEIYGCVVDLLG 462
Query: 452 RAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVL 511
R G++ +A + + P D V G LL AC+ +G+ AK+ L+P YV+
Sbjct: 463 RPGRVEDAYQLIRSMPFMADESVWGALLGACKAHNFSRLGKLAAKKALALRPNMVETYVM 522
Query: 512 LSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVA 558
LSN+YA++G WG+ A RK++K +G +K S IEV+ F V
Sbjct: 523 LSNIYAAEGKWGEAARMRKLMKRAGCRKVAGRSWIEVRNQVYSFVVG 569
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 196/394 (49%), Gaps = 12/394 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVI-VSNHVLNLYAKCG-KMILARKV 59
A +ISS+L C K + G +H +K I V N ++++YA CG M A V
Sbjct: 111 AFTISSVLKACKGMKRVFCGRLVHGLAIKRRFMEGFIYVDNALMDMYASCGVGMRDACVV 170
Query: 60 FDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSL 116
F ++ E+N+VSW+ +I+G+ G AL+ F +M L N + + A+ ACA I S
Sbjct: 171 FHDIKEKNVVSWTTLIAGYTHRGNGNRALQIFREMLLDGVALNPHSISIAVRACASIGSQ 230
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G+QIH +K G+ S V NS++ MY + G S+A + + E +L+++N LIAG+
Sbjct: 231 NFGRQIHTAVIKHGFESDLPVTNSILDMYCRCGCLSEANKYFNDMTEKDLITWNTLIAGY 290
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
+ E F +F M +G P+ F+F + C+ + L+ G +H + L+ N
Sbjct: 291 ERSDSIEP-FFIFSQMESEGFSPNCFTFTSLVAACANAAALQCGQQVHGGIFRRGLDGNL 349
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
+ N ++ +Y+K I +++K F + +L+SW + + ++ + +F EM
Sbjct: 350 ELANALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMIGYGTHGYGKEAVELFDEMVRS 409
Query: 297 HGVRPDDFTFASILAACAGLASVQHG-KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
G+RPD F ++L AC+ V G + I+ + + + + +V++ + G +
Sbjct: 410 -GIRPDQVVFMAVLHACSHAGLVDQGLRYINCMINDYHIKPNQEIYGCVVDLLGRPGRVE 468
Query: 356 CSYKLFNEM-LHRNVVSWNTIIAAHANH---RLG 385
+Y+L M + W ++ A H RLG
Sbjct: 469 DAYQLIRSMPFMADESVWGALLGACKAHNFSRLG 502
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 195/578 (33%), Positives = 305/578 (52%), Gaps = 9/578 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQP-DVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SLL T G ++HA +++ + P +SNH++N+Y+K + A+ V
Sbjct: 9 LGSLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLT 68
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
R +V+W+++ISG L AL F+ M ++ PN++ F A A +Q + G+
Sbjct: 69 HLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGK 128
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH +LK G FVG S MY K G+ DA ++ E + NL ++NA I+ V+++
Sbjct: 129 QIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDR 188
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ FK L P+ +F L C L G LH V+C + + V N
Sbjct: 189 RSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVAN 248
Query: 241 TIMALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ Y K I AE F R+ K+++SW + +AA + E+ VF + + V
Sbjct: 249 GLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKE--V 306
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
P DF +S+L+ACA L ++ G+ +HA ++ + ++ VG+ALV+MY KCG I + +
Sbjct: 307 EPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQ 366
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK--ATGIKPDSVTFIGLLTACNHA 417
+F+E+ RN+V+WN +I +A+ AL+LFE+M + GI+P VT I +L+ C+
Sbjct: 367 VFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRV 426
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
G V+ G F SM YGI P EHF C++DLLGR+G + A E+ + + V G
Sbjct: 427 GAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGA 486
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL ACR+ +G+ A++LF L + +V+LSN+ AS G W + RK +KD G+
Sbjct: 487 LLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGI 546
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KK YS I V+ F + SH + EI ML L
Sbjct: 547 KKNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKL 584
>gi|15217470|ref|NP_177298.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169716|sp|Q9C9H9.1|PP114_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71420
gi|12323734|gb|AAG51830.1|AC016163_19 hypothetical protein; 56014-58251 [Arabidopsis thaliana]
gi|332197078|gb|AEE35199.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 745
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 196/574 (34%), Positives = 323/574 (56%), Gaps = 35/574 (6%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLK--MGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
++ ++L C++ + L GI+LH +L +VI++N ++N+YAKCG ++ AR+VF
Sbjct: 60 QAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVF 119
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM--HLLPNEYIFASAISACAGIQSLVK 118
D M ERN+VSW+A+I+G+ QAG FS M H PNE+ +S +++C
Sbjct: 120 DTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNEFTLSSVLTSC----RYEP 175
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKV---GYSSDALLVYGEAFEPNLVSFNALIAG 175
G+Q+H +LK G +V N++ISMY + + +A V+ NLV++N++IA
Sbjct: 176 GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAA 235
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS--------VSNDLRKGMI-LHCL 226
F +K VF M G+ DR A L ICS V N++ K + LH L
Sbjct: 236 FQCCNLGKKAIGVFMRMHSDGVGFDR---ATLLNICSSLYKSSDLVPNEVSKCCLQLHSL 292
Query: 227 TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE----KDLISWNTFIAACSHCAD 282
TVK L + V ++ +YS+ ++ + ++L E +D+++WN I A + D
Sbjct: 293 TVKSGLVTQTEVATALIKVYSE--MLEDYTDCYKLFMEMSHCRDIVAWNGIITAFA-VYD 349
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
E+ + +F ++ + + PD +TF+S+L ACAGL + +H IHA +I+ D + N
Sbjct: 350 PERAIHLFGQLRQEK-LSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNN 408
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
+L++ YAKCG + ++F++M R+VVSWN+++ A++ H S L +F++M I P
Sbjct: 409 SLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD---INP 465
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
DS TFI LL+AC+HAG V+EG F SM + P + H+ C+ID+L RA + EAEE
Sbjct: 466 DSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEV 525
Query: 463 TKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHL-QPTTTSPYVLLSNLYASDGM 521
K+ P+ D +V LL +CR + +G+ A +L L +PT + Y+ +SN+Y ++G
Sbjct: 526 IKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGS 585
Query: 522 WGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKF 555
+ + + K ++ ++KEP S E+ +F
Sbjct: 586 FNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEF 619
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 187/560 (33%), Positives = 315/560 (56%), Gaps = 5/560 (0%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
CS+ ++ G LH V++ G+ +V N ++ +Y+K ++ ARK+FD M + +LV W
Sbjct: 122 CSEA-MVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVW 180
Query: 72 SAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
+ MI G+ Q G A F++M + P+ F S + + A SL + ++IH Y ++
Sbjct: 181 NRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVR 240
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
G ++ ++LI +Y K + A ++ + + ++V + A+I+G+V N + E+
Sbjct: 241 HGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEI 300
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
F+ +L++ ++P+ +F+ L C+ ++ G LH +K +LE VG+ IM +Y+K
Sbjct: 301 FRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAK 360
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
+ A F I KD I WN+ I + S E+ + +F++M + GV+ D T ++
Sbjct: 361 CGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGME-GVKYDCVTVSA 419
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
L+ACA + ++ +GK+IH +I+ D+ +AL+NMYAKCG ++ + +FN M +N
Sbjct: 420 ALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKN 479
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
V+WN+IIAA+ H +L LF M GI+PD +TF+ +L++C HAG V++G YF
Sbjct: 480 EVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFR 539
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDV 488
M + YGI +EH+ C+ DL GRAG L EA E P V GTLL ACR+ +V
Sbjct: 540 CMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHGNV 599
Query: 489 VIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEV 548
+ E ++ L L+P + Y+LL+++ A G W V + ++K+ G++K P S IEV
Sbjct: 600 ELAEVASRYLLDLEPKNSGYYLLLTHVLADAGKWRSVHKIQHLMKERGVQKVPGCSWIEV 659
Query: 549 QGTFEKFTVAEFSHSKIGEI 568
T F A+ SH + +I
Sbjct: 660 NNTTCVFFAADGSHPESPQI 679
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/456 (27%), Positives = 235/456 (51%), Gaps = 5/456 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++ C+ ++ G + +L+MG D+ V++ ++ LYA G + AR+ FD+M
Sbjct: 12 TFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFFDKM 71
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+++ V W+ MI+G+ Q GE A++ F M P+ FA +S + G+
Sbjct: 72 IDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGR 131
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H ++ G + VGN+L+++Y K DA ++ + +LV +N +I G+V+N
Sbjct: 132 QLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNG 191
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ +F M+ G+ PD +F L + S+ L++ +H V+ + + ++ +
Sbjct: 192 FMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNS 251
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ LY K A K F L + D++ + I+ + L +F+ + +
Sbjct: 252 ALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMI- 310
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P+ TF+SIL ACAGLA+++ G+++H ++I+ L + VG+A++NMYAKCG + ++ +
Sbjct: 311 PNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLI 370
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F + ++ + WN+II + + A+ LF QM G+K D VT L+AC + +
Sbjct: 371 FGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPAL 430
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
G+ M K D+ + LI++ + GKL
Sbjct: 431 HYGKEIHGFMIKG-AFESDLFDMSALINMYAKCGKL 465
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 170/329 (51%), Gaps = 1/329 (0%)
Query: 96 LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL 155
+ P++Y F I C G+ ++ G+ I L+ G+ FV +SLI +Y G DA
Sbjct: 6 VFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDAR 65
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN 215
+ + + + V +N +I G+V+ + + ++FK M+ PD +FA L I
Sbjct: 66 RFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEA 125
Query: 216 DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIA 275
+ G LH L V+ L+ P VGNT++ +YSK +G+A K F ++ + DL+ WN I
Sbjct: 126 MVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIG 185
Query: 276 ACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN 335
+ +F EM + G++PD TF S L + A +S++ K+IH +++R +
Sbjct: 186 GYVQNGFMDDASMLFNEMIS-AGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVI 244
Query: 336 QDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM 395
DV + +AL+++Y KC + K+FN ++V + +I+ + + + AL++F +
Sbjct: 245 LDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWL 304
Query: 396 KATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+ P+++TF +L AC +K G
Sbjct: 305 LQKKMIPNALTFSSILPACAGLAAIKLGR 333
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 180/322 (55%), Gaps = 4/322 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S L +++ +L+Q +H +++ G+ DV +++ +++LY KC ++A K+F+
Sbjct: 214 TFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLS 273
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFS---QMHLLPNEYIFASAISACAGIQSLVKGQ 120
++ ++V ++AMISG+ G + ALE F Q ++PN F+S + ACAG+ ++ G+
Sbjct: 274 TKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGR 333
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H Y +K VG+++++MY K G A L++G + + +N++I F ++
Sbjct: 334 ELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDG 393
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+PE+ +F+ M +G+ D + + L C+ L G +H +K ES+ F +
Sbjct: 394 KPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMS 453
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y+K + A F L++EK+ ++WN+ IAA + L++F M + G++
Sbjct: 454 ALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNML-EEGIQ 512
Query: 301 PDDFTFASILAACAGLASVQHG 322
PD TF +IL++C V+ G
Sbjct: 513 PDHITFLTILSSCGHAGQVEDG 534
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 140/258 (54%), Gaps = 2/258 (0%)
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
ML G+ PD+++F ++ C+ N++R G ++ + ++ + + FV ++++ LY+
Sbjct: 1 MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
I +A + F + +KD + WN I C + + + +FK+M + +PD TFA +L+
Sbjct: 61 IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEA-KPDSVTFACVLS 119
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
A V++G+Q+H ++R L+ VGN LV +Y+K + + KLF+ M ++V
Sbjct: 120 ISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVV 179
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
WN +I + + A LF +M + GIKPDS+TF L + + +K+ + +
Sbjct: 180 WNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIV 239
Query: 432 KTYGISPDIEHFTCLIDL 449
+ +G+ D+ + LIDL
Sbjct: 240 R-HGVILDVYLNSALIDL 256
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 143/284 (50%), Gaps = 11/284 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + SS+L C+ A++ G LH ++K ++ V + ++N+YAKCG++ LA +F
Sbjct: 313 ALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFG 372
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEY---IFASAISACAGIQSLVK 118
+S ++ + W+++I+ Q G+ A+ F QM + +Y ++A+SACA I +L
Sbjct: 373 RISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHY 432
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G++IH + +K + S F ++LI+MY K G + A LV+ E N V++N++IA +
Sbjct: 433 GKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGY 492
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPF 237
+ +F ML +G+ PD +F L C + + G+ C+T + + P
Sbjct: 493 HGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGI---PA 549
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS----WNTFIAAC 277
+ F G ++AF +I W T + AC
Sbjct: 550 QMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGAC 593
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 186/578 (32%), Positives = 308/578 (53%), Gaps = 5/578 (0%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A +IS +L + +++ G +H + K+G V N ++ YAK + A VFD
Sbjct: 196 AYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFD 255
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAIS---ACAGIQSLVK 118
M R+++SW++MISG G + A+E F +M L E A+ +S ACA + L
Sbjct: 256 GMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFL 315
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ +H YS+K G+ S + + N L+ MY ++ + N+VS+ A+I +
Sbjct: 316 GRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTR 375
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+K +F+ M +G PD F+ L + + L+ G +H ++ +E V
Sbjct: 376 AGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAV 435
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N +M +Y K + EA+ F + KD+ISWNT I S + S+F EM
Sbjct: 436 TNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-- 493
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+RP+ T IL A A L+S++ G+++HA+ +R +D V NAL++MY KCG + +
Sbjct: 494 LRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLAR 553
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+LF+ + ++N++SW ++A + H G A+ LFEQM+ +GI PD+ +F +L AC+H+G
Sbjct: 554 RLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSG 613
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
L EG +F++M K + I P ++H+TC++DLL G L EA E+ P+ D + +L
Sbjct: 614 LRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSL 673
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L CR+ R+V + E +A+++F L+P T YVLL+N+YA W V + + GL+
Sbjct: 674 LRGCRIHRNVKLAEEVAERVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLR 733
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
+ S IE +G F +H + I L ++
Sbjct: 734 ENTGCSWIEAKGKVHVFIADNRNHPQGTRIAEFLNEVA 771
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/467 (29%), Positives = 245/467 (52%), Gaps = 12/467 (2%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPD---VIVSNHVLNLYAKCGKMILARKV 59
+S ++L CS+ ++L+ G H V + D ++ ++ +Y KCG + AR+V
Sbjct: 92 RSYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENARRV 151
Query: 60 FDEMSERNLVS-WSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQS 115
FDEM + + V W+A++SG+ +AG+ + F +MH + P+ Y + + AG+ S
Sbjct: 152 FDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGS 211
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
+ G+ +H K G+ S VGN+L++ Y K + DA+LV+ +++S+N++I+G
Sbjct: 212 IEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISG 271
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
N +K E+F M +G D + L C+ + L G ++H +VK S
Sbjct: 272 CTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQ 331
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
+ N ++ +YS + K FR + +K+++SW I + + Y+K +F+EM
Sbjct: 332 TSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGL 391
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
+ G RPD F S L A AG ++HGK +H + IR + + + V NAL+ MY KCG +
Sbjct: 392 E-GTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNME 450
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ +F+ ++ ++++SWNT+I ++ + L A LF +M ++P++VT +L A
Sbjct: 451 EAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAA 509
Query: 416 HAGLVKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
++ G E + ++ + Y + D LID+ + G LL A
Sbjct: 510 SLSSLERGREMHAYALRRGY-LEDDFVA-NALIDMYVKCGALLLARR 554
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 178/576 (30%), Positives = 307/576 (53%), Gaps = 34/576 (5%)
Query: 34 QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQ 93
+P V N +L YAK + A ++F+ M ER++VSW+ M+S Q+G AL
Sbjct: 225 RPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVD 284
Query: 94 MH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGY 150
MH + + + S+++ACA + SL G+Q+HA ++ +V ++++ +Y K G
Sbjct: 285 MHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGC 344
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
+A V+ + N VS+ LI GF++ + E+F M + + D+F+ A +
Sbjct: 345 FKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISG 404
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
CS D+ LH L++K + N+++++Y+K + AE F +EE+D++SW
Sbjct: 405 CSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSW 464
Query: 271 NTFIAACSHCADY-------------------------------EKGLSVFKEMSNDHGV 299
+ A S + E GL ++ M + V
Sbjct: 465 TGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDV 524
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
PD T+ ++ CA + + + G QI H +++ L D V NA++ MY+KCG IS + K
Sbjct: 525 IPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARK 584
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F+ + +++VSWN +I ++ H +G A+++F+ M G KPD ++++ +L++C+H+GL
Sbjct: 585 IFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGL 644
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V+EG+ YF+ +++ + +SP +EHF+C++DLL RAG L+EA+ + P+ V G LL
Sbjct: 645 VQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALL 704
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
SAC+ + + E AK LF L + Y+LL+ +YA G D A RK+++D G+KK
Sbjct: 705 SACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKK 764
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P YS +EV+ F + SH ++ I L L
Sbjct: 765 NPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLDEL 800
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 212/436 (48%), Gaps = 48/436 (11%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ + +S L C+K +L G LHA V++ D V++ ++ LYAKCG AR+VF
Sbjct: 294 STTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFS 353
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
+ +RN VSW+ +I G Q G +LE F+QM + +++ A+ IS C+ +
Sbjct: 354 SLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCL 413
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY-------------------- 158
+Q+H+ SLK G+ + NSLISMY K G +A ++
Sbjct: 414 ARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQ 473
Query: 159 ----GEAFE-------PNLVSFNALIAGFVENQQPEKGFEVFKLML-RQGLLPDRFSFAG 206
G+A E N++++NA++ ++++ E G +++ ML + ++PD ++
Sbjct: 474 VGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVT 533
Query: 207 GLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKD 266
C+ + G + TVK L + V N ++ +YSK I EA K F + KD
Sbjct: 534 LFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKD 593
Query: 267 LISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
L+SWN I S ++ + +F +M G +PD ++ ++L++C+ VQ GK
Sbjct: 594 LVSWNAMITGYSQHGMGKQAIEIFDDMLK-KGAKPDYISYVAVLSSCSHSGLVQEGKFYF 652
Query: 327 AHLIRMRLNQDVGVG----NALVNMYAKCGLISCSYKLFNEMLHRNVVS-WNTIIAA--- 378
L R + +V G + +V++ A+ G + + L +EM + W +++A
Sbjct: 653 DMLKR---DHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKT 709
Query: 379 HANHRLGGSALK-LFE 393
H N+ L A K LF+
Sbjct: 710 HGNNELAELAAKHLFD 725
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 114/495 (23%), Positives = 215/495 (43%), Gaps = 69/495 (13%)
Query: 34 QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQ 93
+P+VI N ++N YAK G + A ++F M R++ SW+ ++SG++Q+G L A+E F
Sbjct: 92 EPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVS 151
Query: 94 MHL----LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
M LPN + F A+ +C + Q+ KFG+ V ++ M+++ G
Sbjct: 152 MRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCG 211
Query: 150 ------------------------------YSSD-ALLVYGEAFEPNLVSFNALIAGFVE 178
Y D AL ++ E ++VS+N +++ +
Sbjct: 212 AVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQ 271
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ + + V M +G+ D ++ L C+ + L G LH ++ +P+V
Sbjct: 272 SGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYV 331
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
+ ++ LY+K EA + F + +++ +SW I + + L +F +M +
Sbjct: 332 ASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAEL- 390
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC------- 351
+ D F A+I++ C+ + +Q+H+ ++ + V + N+L++MYAKC
Sbjct: 391 MTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAE 450
Query: 352 ------------------------GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGS 387
G I + + F+ M RNV++WN ++ A+ H
Sbjct: 451 SIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEED 510
Query: 388 ALKLFEQM-KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCL 446
LK++ M + PD VT++ L C G K G+ K G+ D +
Sbjct: 511 GLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKV-GLILDTSVMNAV 569
Query: 447 IDLLGRAGKLLEAEE 461
I + + G++ EA +
Sbjct: 570 ITMYSKCGRISEARK 584
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 123/338 (36%), Gaps = 78/338 (23%)
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
E N N +M Y+K + +AE+ F + +D+ SWNT ++ + + F
Sbjct: 92 EPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVS 151
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
M P+ FTF + +C L + Q+ L + D V +V+M+ +CG
Sbjct: 152 MRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCG 211
Query: 353 LISCSYK-------------------------------LFNEMLHRNVVSWNTIIAAHAN 381
+ + K LF M R+VVSWN +++A +
Sbjct: 212 AVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQ 271
Query: 382 HRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN-----------HA------------- 417
AL + M G++ DS T+ LTAC HA
Sbjct: 272 SGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYV 331
Query: 418 -----------GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
G KE F+S+ +S +T LI + G E+ E +
Sbjct: 332 ASAMVELYAKCGCFKEARRVFSSLRDRNTVS-----WTVLIGGFLQYGCFSESLELFNQM 386
Query: 467 P---LGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHL 501
+ D L T++S C R D+ LA+QL L
Sbjct: 387 RAELMTVDQFALATIISGCSNRMDMC----LARQLHSL 420
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 181/576 (31%), Positives = 300/576 (52%), Gaps = 5/576 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+IS LL + + G+ H ++K+G V N +++ YAK + A VF+ M
Sbjct: 419 AISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRM 478
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNE---YIFASAISACAGIQSLVKGQ 120
++ +SW+++ISG G + A+E F +M E S + ACA + G+
Sbjct: 479 PRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGR 538
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H YS+K G + + N+L+ MY ++ + N+VS+ A+I ++
Sbjct: 539 VVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAG 598
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+K + + M+ G+ PD F+ L + L++G +H T++ +E V N
Sbjct: 599 LFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVAN 658
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+M +Y K + EA F + KD+ISWNT I S + S+F +M R
Sbjct: 659 ALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQ--FR 716
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P+ T IL A A ++S++ G++IHA+ +R +D NALV+MY KCG + + L
Sbjct: 717 PNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVL 776
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+ + +N++SW +IA + H G A+ LFEQM+ +GI+PD+ +F +L AC H+GL
Sbjct: 777 FDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLA 836
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG +F +M+K Y I P ++H+TC++DLL R G L EA E+ + P+ D + +LL
Sbjct: 837 AEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLH 896
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
CR+ ++V + E++A ++F L+P T YVLL+N+YA W V + + GL++
Sbjct: 897 GCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLREN 956
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
YS IEV+ F +H I L ++
Sbjct: 957 TGYSWIEVRSKVHVFIADNRNHPDWNRIAEFLDDVA 992
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 217/439 (49%), Gaps = 13/439 (2%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSER-NLVSWSAMISGHHQAGEHLLALEFFSQM 94
D + + ++ +Y KCG M AR+VFD MS + N+ W+ ++ G+ + GE +L F QM
Sbjct: 349 DAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQM 408
Query: 95 HLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
H L P+E+ + + + G H Y +K G+ + V N+LIS Y K
Sbjct: 409 HELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMI 468
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
DA+LV+ + +S+N++I+G N + E+F M QG D + L C
Sbjct: 469 GDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPAC 528
Query: 212 SVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
+ S G ++H +VK L + N ++ +YS + + FR + +K+++SW
Sbjct: 529 AQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWT 588
Query: 272 TFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
I + ++K + +EM D G+RPD F S L A AG S++ GK +H + IR
Sbjct: 589 AMITSYMRAGLFDKVAGLLQEMVLD-GIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIR 647
Query: 332 MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
+ + + V NAL+ MY KC + + +F+ + +++V+SWNT+I ++ + + L
Sbjct: 648 NGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSL 707
Query: 392 FEQMKATGIKPDSVTFIGLLTACNHAGLVKEG-EAYFNSMEKTYGISPDIEHFTCLIDLL 450
F M +P++VT +L A ++ G E + ++ + G D L+D+
Sbjct: 708 FSDMLLQ-FRPNAVTMTCILPAAASISSLERGREIHAYALRR--GFLEDSYASNALVDMY 764
Query: 451 GRAGKLLEA----EEYTKK 465
+ G LL A + TKK
Sbjct: 765 VKCGALLVARVLFDRLTKK 783
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 224/450 (49%), Gaps = 20/450 (4%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++S +L S +L +G +H + K+G+ V+N ++ +Y++CG+M A +VFD
Sbjct: 204 AHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFD 263
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNE---YIFASAISACAGIQSLVK 118
M R+ +SW++MI G G H A++ FS+M E S + ACAG+ +
Sbjct: 264 SMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLI 323
Query: 119 GQQIHAYSLK----FGYASI------SFVGNSLISMYMKVGYSSDALLVYGE-AFEPNLV 167
G+ +H YS+K +G S+ + +G+ L+ MY+K G + A V+ + + N+
Sbjct: 324 GKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVH 383
Query: 168 SFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLT 227
+N ++ G+ + + E+ +F M G+ PD + + L+ + + R G++ H
Sbjct: 384 VWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYI 443
Query: 228 VKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGL 287
VK + V N +++ Y+K N+IG+A F + +D ISWN+ I+ CS + +
Sbjct: 444 VKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAI 503
Query: 288 SVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNM 347
+F M G D T S+L ACA G+ +H + ++ L + + NAL++M
Sbjct: 504 ELFIRMWT-QGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDM 562
Query: 348 YAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTF 407
Y+ C + ++F M +NVVSW +I ++ L L ++M GI+PD
Sbjct: 563 YSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAV 622
Query: 408 IGLLTACNHAGLVKEGEAYF-----NSMEK 432
L A +K+G++ N MEK
Sbjct: 623 TSALHAFAGDESLKQGKSVHGYTIRNGMEK 652
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 206/433 (47%), Gaps = 23/433 (5%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAV-----LKMGIQPDVIVSNHVLNLYAKCGKMILAR 57
+S ++ C + ++L+ HA + G + V+ VL Y KCG + AR
Sbjct: 98 RSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVL-AYLKCGDLGEAR 156
Query: 58 KVFDEMSER--NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAG 112
VFD M + ++ W++++S + +AG+ A+ F QM + P+ + + + +
Sbjct: 157 TVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSS 216
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
+ SL +G+ IH K G V N+LI++Y + G DA V+ + +S+N++
Sbjct: 217 LGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSM 276
Query: 173 IAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
I G N ++F M QG + L C+ G +H +VK L
Sbjct: 277 IGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGL 336
Query: 233 E----------SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK-DLISWNTFIAACSHCA 281
+ +G+ ++ +Y K + A + F + K ++ WN + +
Sbjct: 337 LWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVG 396
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
++E+ LS+F +M ++ G+ PD+ + +L L+ + G H +++++ V
Sbjct: 397 EFEESLSLFVQM-HELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVC 455
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
NAL++ YAK +I + +FN M ++ +SWN++I+ +++ L A++LF +M G +
Sbjct: 456 NALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQE 515
Query: 402 PDSVTFIGLLTAC 414
DSVT + +L AC
Sbjct: 516 LDSVTLLSVLPAC 528
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 175/403 (43%), Gaps = 32/403 (7%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASI----SFVGNSLISMYMKVGYSSDALLVY 158
+ + C +SL ++ HA A+ S +G L+ Y+K G +A V+
Sbjct: 100 YCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLGEARTVF 159
Query: 159 GEAFEP---NLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN 215
+ P ++ + +L++ + + ++ +F+ M G+ PD + + L+ S
Sbjct: 160 -DGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLG 218
Query: 216 DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIA 275
L +G ++H L K L V N ++A+YS+ + +A + F + +D ISWN+ I
Sbjct: 219 SLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIG 278
Query: 276 ACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRL- 334
C + + +F +M + G T S+L ACAGL GK +H + ++ L
Sbjct: 279 GCFSNGWHGTAVDLFSKMWS-QGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLL 337
Query: 335 ---------NQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR-NVVSWNTIIAAHANHRL 384
D +G+ LV MY KCG ++ + ++F+ M + NV WN I+ +A
Sbjct: 338 WGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGE 397
Query: 385 GGSALKLFEQMKATGIKPDSVTFIGLLT-----ACNHAGLVKEGEAYFNSMEKTYGISPD 439
+L LF QM GI PD LL +C GLV G Y + G
Sbjct: 398 FEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHG--YIVKL----GFGAQ 451
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
LI ++ + +A + P QD I +++S C
Sbjct: 452 CAVCNALISFYAKSNMIGDAVLVFNRMPR-QDTISWNSVISGC 493
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 71/114 (62%), Gaps = 7/114 (6%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A +++ +L + +L++G +HA L+ G D SN ++++Y KCG +++AR +FD
Sbjct: 719 AVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFD 778
Query: 62 EMSERNLVSWSAMISGH--HQAGEHLLALEFFSQMH---LLPNEYIFASAISAC 110
++++NL+SW+ MI+G+ H G+H +AL F QM + P+ F++ + AC
Sbjct: 779 RLTKKNLISWTIMIAGYGMHGFGKHAIAL--FEQMRGSGIEPDAASFSAILYAC 830
>gi|125550837|gb|EAY96546.1| hypothetical protein OsI_18451 [Oryza sativa Indica Group]
Length = 591
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 195/574 (33%), Positives = 307/574 (53%), Gaps = 22/574 (3%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLK-----------MGIQPDVIVSNHVLNLYAKCGKMI 54
S LL C + L+ G +LHAAV+K ++ ++ N ++++YA+CG+
Sbjct: 15 SGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNALVSMYARCGRRE 74
Query: 55 LARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISAC 110
A +VFDEM R+ VSW+++I+ AG+ AL F +M + F + +S C
Sbjct: 75 DAARVFDEMRVRDAVSWNSLIAASRGAGD---ALALFRRMLRSDARACDRATFTTVLSEC 131
Query: 111 A--GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVS 168
A G SL +H + G+ + VGN+L++ Y + G + A V+ E N+++
Sbjct: 132 ARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNVIT 191
Query: 169 FNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV 228
+ A+I+G + ++ F +F M+R + + +++ L C+ S R+G +H L V
Sbjct: 192 WTAMISGMARAELYKESFSLFGQMIRT-VDANNATYSCTLLACARSLAAREGQQVHGLVV 250
Query: 229 KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLS 288
K E++ V + +M +YSK L+ +A FR E D + + + EK
Sbjct: 251 KAGFEADLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAFE 310
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMY 348
+F EM G D+ T +++L A A GKQIHA +I+ + V N LVNMY
Sbjct: 311 LFAEMVG-AGNEIDENTVSTVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVNMY 369
Query: 349 AKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
+KCG + S ++F+EM +N VSWN+IIAA A H G +LFE MKA G KP VTF+
Sbjct: 370 SKCGELRESVQVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFL 429
Query: 409 GLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
LL AC+H G K+G NSM YG+ P +EH+ C++D+LGRAG L +A+ + + P
Sbjct: 430 SLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIEDGPF 489
Query: 469 GQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGA 528
++ L+ AC + +G+ A++L L P+ T+ YVLLSN+Y+S+G W D A
Sbjct: 490 TDSALLWQALMGACSFHGNSEVGKHAAEKLLLLDPSCTAAYVLLSNIYSSEGRWDDRAKV 549
Query: 529 RKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
K + + GL+K+ S IE++ F V SH
Sbjct: 550 MKRMSEMGLRKDTGKSWIELEKEVHSFVVRSTSH 583
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 129/269 (47%), Gaps = 18/269 (6%)
Query: 204 FAGGLEICSVSNDLRKGMILHCLTVKCK-----LESNPFVGNTIM---ALYSKFNLIGEA 255
F+G L C DLR G LH VK S P++ + ++ AL S + G
Sbjct: 14 FSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNALVSMYARCGRR 73
Query: 256 EKAFRLIEE---KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
E A R+ +E +D +SWN+ IAA D L++F+ M D TF ++L+
Sbjct: 74 EDAARVFDEMRVRDAVSWNSLIAASRGAGD---ALALFRRMLRSDARACDRATFTTVLSE 130
Query: 313 C--AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVV 370
C AG AS+ +H ++ +V VGNALV Y +CG + + ++F+ M +NV+
Sbjct: 131 CARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNVI 190
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSM 430
+W +I+ A L + LF QM T + ++ T+ L AC + +EG+ +
Sbjct: 191 TWTAMISGMARAELYKESFSLFGQMIRT-VDANNATYSCTLLACARSLAAREGQQVHGLV 249
Query: 431 EKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
K G D+ + L+D+ + G + +A
Sbjct: 250 VKA-GFEADLHVESGLMDVYSKCGLMEDA 277
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 70/131 (53%), Gaps = 4/131 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++S++L + G +HA V+K + V N ++N+Y+KCG++ + +VFDEM
Sbjct: 326 TVSTVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVNMYSKCGELRESVQVFDEM 385
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+N VSW+++I+ + G + F M P + F S + AC+ + S KG
Sbjct: 386 PSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGL 445
Query: 121 QI-HAYSLKFG 130
+I ++ S ++G
Sbjct: 446 EILNSMSSQYG 456
>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
Length = 696
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 176/556 (31%), Positives = 306/556 (55%), Gaps = 9/556 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
++SL+ C+K +AL++G LH ++ G + D+ + +L +YAKCG + A++VF+ M
Sbjct: 13 VTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGME 72
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
++L +WS++IS + +AG +A+ + +M + PN FA A+ CA + L G+
Sbjct: 73 IKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRA 132
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
IH L + +SL++MY+K +A V+ N+ S+ A+I+ +V+ +
Sbjct: 133 IHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGE 192
Query: 182 PEKGFEVFKLMLR-QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ E+F M + + + P+ ++FA L +L KG +H ++N V N
Sbjct: 193 HAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQN 252
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y K EA K F + +++ISW + IAA + + ++ L++FK M V
Sbjct: 253 ALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMD----VE 308
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P +F+S L ACA L ++ G++IH ++ L + +L++MYA+CG + + ++
Sbjct: 309 PSGVSFSSALNACALLGALDEGREIHHRVVEAHLASP-QMETSLLSMYARCGSLDDARRV 367
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN M R+ S N +IAA H AL+++ +M+ GI D +TF+ +L AC+H LV
Sbjct: 368 FNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLV 427
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+ +F S+ +G+ P +EH+ C++D+LGR+G+L +AEE + P D + TLLS
Sbjct: 428 ADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLS 487
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
C+ D+ GER A+++F L P T PYV LSN+YA+ + D RK +++ G+
Sbjct: 488 GCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTTP 547
Query: 541 PSYSMIEVQGTFEKFT 556
+ S IE+ FT
Sbjct: 548 VAVSYIEIDNELHMFT 563
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 199/364 (54%), Gaps = 5/364 (1%)
Query: 96 LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL 155
++ +++I S ++AC +Q+L +G+++H + + G+ + + +L+ MY K G DA
Sbjct: 6 IVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAK 65
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN 215
V+ +L +++++I+ + + E +++ M+ +G+ P+ +FA L C+
Sbjct: 66 RVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVA 125
Query: 216 DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIA 275
L G +H + K+ + + ++++ +Y K + + EA K F ++ +++ S+ I+
Sbjct: 126 GLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMIS 185
Query: 276 ACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN 335
A ++ + L +F MS + P+ +TFA+IL A GL +++ G+++H HL +
Sbjct: 186 AYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFD 245
Query: 336 QDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM 395
+V V NALV MY KCG + K+F+ M RNV+SW ++IAA+A H AL LF++M
Sbjct: 246 TNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM 305
Query: 396 KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGK 455
++P V+F L AC G + EG + + + + SP +E T L+ + R G
Sbjct: 306 D---VEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQME--TSLLSMYARCGS 360
Query: 456 LLEA 459
L +A
Sbjct: 361 LDDA 364
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 76/131 (58%)
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
+ G+ D F S++AAC L +++ G+++H HLI D+ + AL+ MYAKCG +
Sbjct: 2 EERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSL 61
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ ++F M +++ +W++II+A+A G A+ L+ +M A G++P+ VTF L C
Sbjct: 62 DDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGC 121
Query: 415 NHAGLVKEGEA 425
+ +G A
Sbjct: 122 ASVAGLADGRA 132
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 183/583 (31%), Positives = 328/583 (56%), Gaps = 14/583 (2%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
++ S + L C + + + G +H +K+G + D V +L +Y KC + A KVF
Sbjct: 240 VSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVF 299
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAI--SACAGIQS 115
+E+ ++ + W+A+IS + G AL + QM L L + + + + S+ AG+
Sbjct: 300 NEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYD 359
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
L G+ IH +K S + ++L++MY K G S+ A ++ E ++V++ ++I+G
Sbjct: 360 L--GRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISG 417
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
F +N++ ++ + F+ M + PD A + C+ + G +H +K L+ +
Sbjct: 418 FCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLD 477
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSV--FKE- 292
FV ++++ +YSKF A F + K+L++WN+ I+ +C + LS+ F +
Sbjct: 478 VFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISC--YCRNNLPDLSINLFSQV 535
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
+ ND + PD +F S+LAA + +A++ GK +H +L+R+ + D+ V N L++MY KCG
Sbjct: 536 LRND--LYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCG 593
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
L+ + +F + +N+V+WN++I + +H A++LF++M+++GIKPD VTF+ LL+
Sbjct: 594 LLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLS 653
Query: 413 ACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDP 472
+CNH+GL++EG F M+ +GI P +EH+ ++DL GRAG L +A + K P+ D
Sbjct: 654 SCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVEPDR 713
Query: 473 IVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKML 532
+ +LL +C++ ++ +GE +A +L +++P+ S YV L NLY +W A R +
Sbjct: 714 SIWLSLLCSCKIHLNLELGEMVANKLLNMEPSKGSNYVQLLNLYGEAELWDRTANLRASM 773
Query: 533 KDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
K+ GLKK P S IEV+ + F + S EI L +L
Sbjct: 774 KEKGLKKTPGCSWIEVRNKVDVFYSGDCSSPITTEIYDTLSSL 816
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 233/484 (48%), Gaps = 27/484 (5%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM--- 63
SLL C+ LQ G ++H++++ G+ D +++ ++N+Y KCG A KVFD++
Sbjct: 58 SLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQLPKS 117
Query: 64 --SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQ 121
S ++ W+++I G+ + G+ + F +M +G + +G+Q
Sbjct: 118 GVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQ--------------SSGYK---EGKQ 160
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE-PNLVSFNALIAGFVENQ 180
IH+Y ++ F+ +LI Y K G ++A ++ + + N+V++N +I GF EN
Sbjct: 161 IHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENG 220
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E E + L + + SF L C + G +HC +K E +P+V
Sbjct: 221 LWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHT 280
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +Y K +I AEK F + +K++ WN I+A L ++K+M V
Sbjct: 281 SLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKL-CTVL 339
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D FT ++L + + G+ IH +++ L + + +AL+ MY+K G + + +
Sbjct: 340 SDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSI 399
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+ M R+VV+W ++I+ +R AL F M+A +KPDS +++AC V
Sbjct: 400 FSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKV 459
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
G + K+ G+ D+ + L+D+ + G A PL ++ + +++S
Sbjct: 460 DLGCTIHGFVIKS-GLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPL-KNLVAWNSIIS 517
Query: 481 A-CR 483
CR
Sbjct: 518 CYCR 521
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 170/351 (48%), Gaps = 27/351 (7%)
Query: 80 QAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
Q +++ AL+ +++ + + + S + ACA + +L G+ IH+ + G S ++ +
Sbjct: 33 QQRQYIEALKLYTKSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITS 92
Query: 140 SLISMYMKVGYSSDALLVYGEAFEP-----NLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
SLI++Y+K G +DA+ V+ + + ++ +N++I G+ Q E+G F M
Sbjct: 93 SLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQS 152
Query: 195 QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGE 254
G ++G +H V+ L +PF+ ++ Y K E
Sbjct: 153 SGY--------------------KEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTE 192
Query: 255 AEKAFRLIEEK-DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
A F+ ++++ ++++WN I +E L + ++ V+ +F L+AC
Sbjct: 193 ARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYL-LAKTENVKVVSSSFTCTLSAC 251
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
V GKQ+H I++ D V +L+ MY KC +I + K+FNE+ + + WN
Sbjct: 252 GQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWN 311
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+I+A+ + AL++++QMK + DS T + +LT+ + AGL G
Sbjct: 312 ALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGR 362
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 192/627 (30%), Positives = 316/627 (50%), Gaps = 74/627 (11%)
Query: 23 SLHAAVLK-MGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQA 81
++H VL+ + P V NH+L YA+ G++ LAR++FD M + NL + +A++S A
Sbjct: 30 AVHCLVLRTLPHPPPTYVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHA 89
Query: 82 GEHLLALEFFSQM-----------------------------------------HLLPNE 100
F+ M + P+
Sbjct: 90 RLLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSR 149
Query: 101 YIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGE 160
+ + A + + G+Q+H ++ G+ + +F + L+ MY K+G DA V+ E
Sbjct: 150 ITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDE 209
Query: 161 AFEPNLVSFNALIAGFV-------------------------------ENQQPEKGFEVF 189
N+V +N +I G + +N + +VF
Sbjct: 210 MVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVF 269
Query: 190 KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF 249
+ M +G+ D+++F L C +G +H T++ + N FVG+ ++ +YSK
Sbjct: 270 RRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKC 329
Query: 250 NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
I AE FR + K++ISW I E+ + VF EM D G++P+DFT S+
Sbjct: 330 RSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTD-GIKPNDFTLGSV 388
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
+++CA LAS++ G Q H + L + V +ALV +Y KCG I +++LF+EM +
Sbjct: 389 ISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQ 448
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNS 429
VS+ +++ +A + LFE+M G+KP+ VTFIG+L+AC+ +GLV++G +YF+S
Sbjct: 449 VSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHS 508
Query: 430 MEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVV 489
M++ +GI +H+TC+IDL R+G+L EAEE+ ++ P D I TLLSACRLR D+
Sbjct: 509 MQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGDME 568
Query: 490 IGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQ 549
IG+ A+ L P + YVLL +++AS G W +VA R+ ++D +KKEP S I+ +
Sbjct: 569 IGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVKKEPGCSWIKYK 628
Query: 550 GTFEKFTVAEFSHSKIGEINYMLKTLS 576
F+ + SH G I L+ L+
Sbjct: 629 NRVHIFSADDQSHPFSGTIYEKLQWLN 655
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 152/292 (52%), Gaps = 13/292 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S+L C A ++G +HA ++ ++ V + ++++Y+KC + LA VF M
Sbjct: 283 TFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRM 342
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+ +N++SW+AMI G+ Q G A+ FS+M + PN++ S IS+CA + SL +G
Sbjct: 343 TCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGA 402
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q H +L G V ++L+++Y K G DA ++ E + VS+ AL++G+ +
Sbjct: 403 QFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFG 462
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV-- 238
+ ++ ++F+ ML +G+ P+ +F G L CS S + KG C + + V
Sbjct: 463 KAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKG----CSYFHSMQQDHGIVLL 518
Query: 239 ---GNTIMALYSKFNLIGEAEKAFRLIEE-KDLISWNTFIAACSHCADYEKG 286
++ LYS+ + EAE+ R + D I W T ++AC D E G
Sbjct: 519 DDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGDMEIG 570
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 188/400 (47%), Gaps = 49/400 (12%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLV----------- 69
G +H ++++G + ++++YAK G + A++VFDEM +N+V
Sbjct: 168 GRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLR 227
Query: 70 --------------------SWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASA 106
+W+ M++G Q G AL+ F +M + ++Y F S
Sbjct: 228 CKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSI 287
Query: 107 ISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNL 166
++AC + + +G+QIHAY+++ Y FVG++L+ MY K A V+ N+
Sbjct: 288 LTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNI 347
Query: 167 VSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCL 226
+S+ A+I G+ +N E+ VF M G+ P+ F+ + C+ L +G HC+
Sbjct: 348 ISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCM 407
Query: 227 TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKG 286
+ L V + ++ LY K I +A + F + D +S+ ++ + ++
Sbjct: 408 ALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKET 467
Query: 287 LSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG-KQIHAHLIRMRLNQDVGVG---- 341
+ +F++M GV+P+ TF +L+AC+ V+ G H+ + QD G+
Sbjct: 468 IDLFEKMLL-KGVKPNGVTFIGVLSACSRSGLVEKGCSYFHS------MQQDHGIVLLDD 520
Query: 342 --NALVNMYAKCGLISCSYKLFNEMLH-RNVVSWNTIIAA 378
++++Y++ G + + + +M + + W T+++A
Sbjct: 521 HYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSA 560
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 179/548 (32%), Positives = 296/548 (54%), Gaps = 5/548 (0%)
Query: 20 QGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHH 79
G+ +H ++K G V N +++ YAK ++ A VFDEM +R+++SW+++I G
Sbjct: 2 DGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCA 61
Query: 80 QAGEHLLALEFFSQMHLLPNEY---IFASAISACAGIQSLVKGQQIHAYSLKFGYASISF 136
G + A+E F +M L E S + AC G +H YS++ G S +
Sbjct: 62 SNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETS 121
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
+GN+L+ MY ++ + N+VS+ A+I + +K +F+ M +G
Sbjct: 122 LGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEG 181
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
+ PD F+ L+ + + L+ G +H ++ +E V N +M +Y K + EA
Sbjct: 182 IRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEAR 241
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
F + +KD ISWNT I S + ++F EM +RP+ T A IL A A L
Sbjct: 242 FIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ--LRPNAVTMACILPAAASL 299
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
+S++ G+++HA+ +R +D V NALV+MY KCG + + +LF+ + ++N++SW +I
Sbjct: 300 SSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMI 359
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
A + H G A+ LFEQMK +GI+PD+ +F +L AC+H+GL EG +FN+M + I
Sbjct: 360 AGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRI 419
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAK 496
P ++H+ C++DLL G L EA E+ + P+ D + +LL CR+ R+V + E++A+
Sbjct: 420 EPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAE 479
Query: 497 QLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFT 556
+F L+P T YVLL+N+YA W V + + GL++ S IEV+G F
Sbjct: 480 MVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFF 539
Query: 557 VAEFSHSK 564
+H +
Sbjct: 540 AENRNHPQ 547
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 164/316 (51%), Gaps = 5/316 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ ++ S++ C ++ G +H ++ G+ + + N +L++Y+ C K+F
Sbjct: 85 STTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFR 144
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVK 118
M ++N+VSW+AMI+ + +AG F +M L P+ + SA+ A AG +SL
Sbjct: 145 NMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKH 204
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ +H Y+++ G + V N+L+ MY+K GY +A ++ + + +S+N LI G+
Sbjct: 205 GKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSR 264
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ + F +F ML Q L P+ + A L + + L +G +H V+ + FV
Sbjct: 265 SNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFV 323
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N ++ +Y K + A + F ++ K+LISW IA +++F++M G
Sbjct: 324 ANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGS-G 382
Query: 299 VRPDDFTFASILAACA 314
++PD +F++IL AC+
Sbjct: 383 IQPDAGSFSAILYACS 398
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 124/217 (57%), Gaps = 10/217 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I+S L + ++L+ G S+H ++ GI+ + V+N ++ +Y KCG M AR +FD +
Sbjct: 188 AITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHV 247
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM--HLLPNEYIFASAISACAGIQSLVKGQQ 121
++++ +SW+ +I G+ ++ A F++M L PN A + A A + SL +G++
Sbjct: 248 TKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQLRPNAVTMACILPAAASLSSLERGRE 307
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE----PNLVSFNALIAGFV 177
+HAY+++ GY +FV N+L+ MY+K G ALL+ F+ NL+S+ +IAG+
Sbjct: 308 MHAYAVRRGYLEDNFVANALVDMYVKCG----ALLLARRLFDMLTNKNLISWTIMIAGYG 363
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVS 214
+ + +F+ M G+ PD SF+ L CS S
Sbjct: 364 MHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHS 400
>gi|110741296|dbj|BAF02198.1| hypothetical protein [Arabidopsis thaliana]
Length = 727
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 195/574 (33%), Positives = 323/574 (56%), Gaps = 35/574 (6%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLK--MGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
++ ++L C++ + L GI+LH +L +VI++N ++N+YAKCG ++ AR+VF
Sbjct: 60 QAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVF 119
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM--HLLPNEYIFASAISACAGIQSLVK 118
D M ERN+VSW+A+I+G+ QAG FS M H PNE+ +S +++C
Sbjct: 120 DTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNEFTLSSVLTSC----RYEP 175
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKV---GYSSDALLVYGEAFEPNLVSFNALIAG 175
G+Q+H +LK G +V N++ISMY + + +A V+ NLV++N++IA
Sbjct: 176 GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAA 235
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS--------VSNDLRKGMI-LHCL 226
F +K VF M G+ DR + L ICS V N++ K + LH L
Sbjct: 236 FQCCNLGKKAIGVFMRMHSDGVGFDRATL---LNICSSLYKSSDLVPNEVSKCCLQLHSL 292
Query: 227 TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE----KDLISWNTFIAACSHCAD 282
TVK L + V ++ +YS+ ++ + ++L E +D+++WN I A + D
Sbjct: 293 TVKSGLVTQTEVATALIKVYSE--MLEDYTDCYKLFMEMSHCRDIVAWNGIITAFA-VYD 349
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
E+ + +F ++ + + PD +TF+S+L ACAGL + +H IHA +I+ D + N
Sbjct: 350 PERAIHLFGQLRQEK-LSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNN 408
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
+L++ YAKCG + ++F++M R+VVSWN+++ A++ H S L +F++M I P
Sbjct: 409 SLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD---INP 465
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
DS TFI LL+AC+HAG V+EG F SM + P + H+ C+ID+L RA + EAEE
Sbjct: 466 DSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEV 525
Query: 463 TKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHL-QPTTTSPYVLLSNLYASDGM 521
K+ P+ D +V LL +CR + +G+ A +L L +PT + Y+ +SN+Y ++G
Sbjct: 526 IKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGS 585
Query: 522 WGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKF 555
+ + + K ++ ++KEP S E+ +F
Sbjct: 586 FNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEF 619
>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
Length = 847
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 200/586 (34%), Positives = 323/586 (55%), Gaps = 24/586 (4%)
Query: 5 ISSLLHHCSKTKALQQGISLHAA-VLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SLL C + L++G LHA VL ++NH++ +Y+ C + A ++F M
Sbjct: 173 LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 232
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
RN VSW+ ++SG Q H AL F+ M + P + +SA A A + + ++ +
Sbjct: 233 PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRAR 292
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
A S G+ + FV ++L MY K G S+A V+ + + + V++ A+I G+ +N
Sbjct: 293 SCTA-SASVGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNG 351
Query: 181 QPEKGFEVFKLMLRQGLL-PDRFSFAGGLEICSVSNDLRKGMI---LHCLTVKCKLESNP 236
E F+ M R+GL+ D+ F + S S L+ G + +HC K E
Sbjct: 352 SLEAAVLSFRDMKREGLVGADQHVFC---SVLSASGGLKDGWLSKSIHCCVTKAGFELEV 408
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY------EKGLSVF 290
V N ++ +Y+K + A + ++ D WN ++ S Y E+ L ++
Sbjct: 409 AVRNALIDMYAKSMDVESASRVLKI----DPGGWNV-VSGTSMIDGYIETDCVEEALVIY 463
Query: 291 KEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
E+ GV P++FTF+S++ CA A ++ G Q+HA +I+ L +D VG+ LV+MY K
Sbjct: 464 VELRR-QGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGK 522
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGL 410
CGLIS S +LFNE+ +R ++WN +I A H G A++ F++M +GI+P+ + F+ L
Sbjct: 523 CGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSL 582
Query: 411 LTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQ 470
LTAC+HAGLV EG YF SM++ +GI P EH++C+ID GRAG+L EA ++ + P+
Sbjct: 583 LTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKP 642
Query: 471 DPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARK 530
+ +LL ACR+R +GE A+ L L+P T +V LS +YAS G W DV RK
Sbjct: 643 NAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRK 702
Query: 531 MLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
+++DS +KK P +S ++ F ++SH + +I L+ L+
Sbjct: 703 LMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELT 748
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/505 (23%), Positives = 212/505 (41%), Gaps = 58/505 (11%)
Query: 5 ISSLLHHCSKTKALQQGISLHAA-VLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SLL C + L++G LHA VL ++NH++ +Y+ C + A ++F M
Sbjct: 23 LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 82
Query: 64 SERNLVSWSAMISG----------------------------------------HHQAGE 83
RN VSW+ ++SG H A
Sbjct: 83 PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAAS 142
Query: 84 H-----LLALEFFSQMHLLP------NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYA 132
H L ++++ Q P AS + +C L +G+ +HA + G A
Sbjct: 143 HCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAA 202
Query: 133 SIS-FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKL 191
+ S F+ N LI+MY + AL ++ N VS+ L++G +N F
Sbjct: 203 AASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAA 262
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCL-TVKCKLESNPFVGNTIMALYSKFN 250
M R G+ P RF+ + + + C + ++ FV + + +YSK
Sbjct: 263 MRRAGVAPTRFALSSAAR--AAAALGAPLRARSCTASASVGFDTELFVASNLADMYSKCG 320
Query: 251 LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
L+ EA + F + +KD ++W I + E + F++M + V D F S+L
Sbjct: 321 LLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVL 380
Query: 311 AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN-EMLHRNV 369
+A GL K IH + + +V V NAL++MYAK + + ++ + NV
Sbjct: 381 SASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNV 440
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNS 429
VS ++I + AL ++ +++ G++P+ TF ++ C L+++G
Sbjct: 441 VSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQ 500
Query: 430 MEKTYGISPDIEHFTCLIDLLGRAG 454
+ KT I T L+D+ G+ G
Sbjct: 501 VIKTDLIRDSFVGST-LVDMYGKCG 524
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS++ C+ L+QG LHA V+K + D V + ++++Y KCG + L+ ++F+E+
Sbjct: 477 TFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEI 536
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
R ++W+A+I+ Q G A++ F +M + PN F S ++AC+
Sbjct: 537 EYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACS 587
>gi|9279602|dbj|BAB01060.1| unnamed protein product [Arabidopsis thaliana]
Length = 598
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 194/567 (34%), Positives = 313/567 (55%), Gaps = 14/567 (2%)
Query: 20 QGISL-HAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGH 78
Q +SL H +K G D+ VSN +L+ Y K G + A +FDEM +R+ VSW+ MISG+
Sbjct: 17 QKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGY 76
Query: 79 HQAGEHLLALEFFSQMHLLPNE---YIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS 135
G+ A F+ M ++ Y F+ + A ++ G+Q+H +K GY
Sbjct: 77 TSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNV 136
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM-LR 194
+VG+SL+ MY K DA + E EPN VS+NALIAGFV+ + + F + LM ++
Sbjct: 137 YVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMK 196
Query: 195 QGLLPDRFSFAGGLEICS---VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
+ D +FA L + N L++ +H +K L+ + N +++ Y+
Sbjct: 197 AAVTMDAGTFAPLLTLLDDPMFCNLLKQ---VHAKVLKLGLQHEITICNAMISSYADCGS 253
Query: 252 IGEAEKAFR-LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
+ +A++ F L KDLISWN+ IA + E + F + + ++ DD+ F+++L
Sbjct: 254 VSDAKRVFDGLGGSKDLISWNSMIAGFAQKGLSEDAVKFFSYLRSSE-IKVDDYAFSALL 312
Query: 311 AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR-NV 369
+C+ LA++Q G+QIHA + + V ++L+ MY+KCG+I + K F ++ + +
Sbjct: 313 RSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHST 372
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNS 429
V+WN +I +A H LG +L LF QM +K D VTF +LTAC+H GL++EG N
Sbjct: 373 VAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNL 432
Query: 430 MEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVV 489
ME Y I P +EH+ +DLLGRAG + +A+E + PL DP+VL T L CR ++
Sbjct: 433 MEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIE 492
Query: 490 IGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQ 549
+ ++A L ++P YV LS++Y+ W + A +KM+K+ G+KK P +S IE++
Sbjct: 493 MATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIR 552
Query: 550 GTFEKFTVAEFSHSKIGEINYMLKTLS 576
+ F + S+ +I M+K L+
Sbjct: 553 NQVKAFNAEDRSNPLCQDIYMMIKDLT 579
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 189/581 (32%), Positives = 305/581 (52%), Gaps = 14/581 (2%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
++ +SLL C K L+Q +HA +L I N L A A F
Sbjct: 31 LSDKFNSLLQQCLSIKQLKQ---IHAQLLTNSIHK----PNSFLYKIADLKDFAYASVFF 83
Query: 61 DEMSERNLVSWSAMISGHHQA-GEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSL 116
+ + S++ MI G A + LALEF+S+M L PN + AC+ + ++
Sbjct: 84 SNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAV 143
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G+ H ++ G V +SLI+MY + G DA V+ E + +LVS+N++I+G+
Sbjct: 144 ENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGY 203
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
+ + + +F+ M+ G P+ S L C DL+ G + V+ K+ N
Sbjct: 204 SKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNY 263
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
F+G+ ++ +Y K + A + F +++KD ++WN I + E+ + +F++M
Sbjct: 264 FMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMS 323
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
PD T IL+ACA + ++ GKQ+ + DV VG ALV+MYAKCG +
Sbjct: 324 -STAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDN 382
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG--IKPDSVTFIGLLTAC 414
++++F M ++N VSWN +I+A A H AL LF+ M G + P+ +TF+G+L+AC
Sbjct: 383 AFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSAC 442
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
HAGLV EG F+ M ++G+ P IEH++C++DL RAG L EA ++ P D ++
Sbjct: 443 VHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVI 502
Query: 475 LGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKD 534
LG LL AC+ R+++ I ER+ K L L+P+ + YV+ S LYA+ W D A R ++K
Sbjct: 503 LGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQ 562
Query: 535 SGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
G+ K P S I++ +F + H + EI+ +L L
Sbjct: 563 KGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQILDLL 603
>gi|115473985|ref|NP_001060591.1| Os07g0670000 [Oryza sativa Japonica Group]
gi|22831115|dbj|BAC15976.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
gi|50510078|dbj|BAD30730.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
gi|113612127|dbj|BAF22505.1| Os07g0670000 [Oryza sativa Japonica Group]
gi|125559550|gb|EAZ05086.1| hypothetical protein OsI_27276 [Oryza sativa Indica Group]
Length = 726
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 178/556 (32%), Positives = 288/556 (51%), Gaps = 18/556 (3%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
LHA + G+ DV V N ++ Y++ G + AR VFD+M R+LVSW+A+I G Q G+
Sbjct: 153 LHALAWRSGLAADVFVGNALVTAYSRGGSLGEARSVFDDMPARDLVSWNALICGLAQDGD 212
Query: 84 HL-----LALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVG 138
+ L + P+ S I AC G L G+Q+H +++K G +G
Sbjct: 213 CPAEVIGVFLRMLRDGDVQPDRISVCSVIPACGGEGKLELGRQVHGFAVKLGVEGYVSIG 272
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL 198
N L++MY K G A ++ E ++VS+ I + E +F M R G+
Sbjct: 273 NVLVAMYYKCGAPGSARRLFDAMSERDVVSWTTAI-----SMDGEDALTLFNGMRRDGVP 327
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKA 258
P+ +F + R ++H +K + N+++ +Y+K + +A
Sbjct: 328 PNEVTFVALMSALPADCPARGAQMVHAACLKAAVSGEAAASNSLITMYAKARRMDDARMV 387
Query: 259 FRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
F L+ +++I+WN I+ + L +F M+ + P++ TFAS+L+A + +
Sbjct: 388 FDLMPRREIIAWNAVISGYAQNGRCNDALELFSSMA--RCLTPNETTFASVLSAVTAVET 445
Query: 319 VQ--HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
V +G+ H+ + M V AL++MYAK G + S K F+E R++++W II
Sbjct: 446 VSMAYGQMYHSRALSMGFGDSEYVAGALIDMYAKRGNLEESRKAFHETEQRSLIAWTAII 505
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
+A+A H G+ + LF M +G+ PD V + +LTAC + G+V G F+SM G+
Sbjct: 506 SANARHGSYGAVMSLFGDMARSGVAPDGVVLLAVLTACRYGGMVDAGRDIFDSMAADRGV 565
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAK 496
EH++C++D+LGRAG+L EAEE + P G L +LL ACR+ D IGER+A+
Sbjct: 566 ELWPEHYSCVVDMLGRAGRLAEAEELMMRMPAGPSVSALQSLLGACRIHGDAEIGERIAR 625
Query: 497 QLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGT----F 552
L +PT + YVLLSN+YA G W VA R+ ++D G+KKE +S ++
Sbjct: 626 ILTEKEPTESGAYVLLSNIYADVGDWDGVAKVRRKMRDRGVKKEIGFSWVDAGAGEALHL 685
Query: 553 EKFTVAEFSHSKIGEI 568
KF+ + +H + EI
Sbjct: 686 HKFSSDDTTHPRTEEI 701
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/454 (29%), Positives = 222/454 (48%), Gaps = 26/454 (5%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
+LHA + G+ V+N + YAK G A VF R++ S++ ++S
Sbjct: 53 ALHAVAVTTGLHGFAAVTNSLAARYAKTGSFPSAVGVFAAARARDVSSYNTILSAFPDPA 112
Query: 83 EHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVG 138
E AL+F S M + P+ A+S AG +Q+HA + + G A+ FVG
Sbjct: 113 E---ALDFASWMLRSGAVRPDAVTCTVALSLAAGRGEGFLVRQLHALAWRSGLAADVFVG 169
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ-PEKGFEVFKLMLRQG- 196
N+L++ Y + G +A V+ + +LVS+NALI G ++ P + VF MLR G
Sbjct: 170 NALVTAYSRGGSLGEARSVFDDMPARDLVSWNALICGLAQDGDCPAEVIGVFLRMLRDGD 229
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
+ PDR S + C L G +H VK +E +GN ++A+Y K G A
Sbjct: 230 VQPDRISVCSVIPACGGEGKLELGRQVHGFAVKLGVEGYVSIGNVLVAMYYKCGAPGSAR 289
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
+ F + E+D++SW T I+ D E L++F M D GV P++ TF ++++A
Sbjct: 290 RLFDAMSERDVVSWTTAIS-----MDGEDALTLFNGMRRD-GVPPNEVTFVALMSALPAD 343
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
+ + +HA ++ ++ + N+L+ MYAK + + +F+ M R +++WN +I
Sbjct: 344 CPARGAQMVHAACLKAAVSGEAAASNSLITMYAKARRMDDARMVFDLMPRREIIAWNAVI 403
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK--EGEAYFN-SMEKT 433
+ +A + AL+LF M A + P+ TF +L+A V G+ Y + ++
Sbjct: 404 SGYAQNGRCNDALELFSSM-ARCLTPNETTFASVLSAVTAVETVSMAYGQMYHSRALSMG 462
Query: 434 YGISPDIEHFT-CLIDLLGRAGKLLEAEEYTKKF 466
+G D E+ LID+ + G L EE K F
Sbjct: 463 FG---DSEYVAGALIDMYAKRGNL---EESRKAF 490
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 162/327 (49%), Gaps = 12/327 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+ S++ C L+ G +H +K+G++ V + N ++ +Y KCG AR++FD M
Sbjct: 236 SVCSVIPACGGEGKLELGRQVHGFAVKLGVEGYVSIGNVLVAMYYKCGAPGSARRLFDAM 295
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
SER++VSW+ IS GE AL F+ M + PNE F + +SA Q
Sbjct: 296 SERDVVSWTTAIS---MDGED--ALTLFNGMRRDGVPPNEVTFVALMSALPADCPARGAQ 350
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+HA LK + + NSLI+MY K DA +V+ ++++NA+I+G+ +N
Sbjct: 351 MVHAACLKAAVSGEAAASNSLITMYAKARRMDDARMVFDLMPRREIIAWNAVISGYAQNG 410
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSV--SNDLRKGMILHCLTVKCKLESNPFV 238
+ E+F M R L P+ +FA L + + + G + H + + +V
Sbjct: 411 RCNDALELFSSMARC-LTPNETTFASVLSAVTAVETVSMAYGQMYHSRALSMGFGDSEYV 469
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++ +Y+K + E+ KAF E++ LI+W I+A + Y +S+F +M+ G
Sbjct: 470 AGALIDMYAKRGNLEESRKAFHETEQRSLIAWTAIISANARHGSYGAVMSLFGDMARS-G 528
Query: 299 VRPDDFTFASILAACAGLASVQHGKQI 325
V PD ++L AC V G+ I
Sbjct: 529 VAPDGVVLLAVLTACRYGGMVDAGRDI 555
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 173/492 (35%), Positives = 275/492 (55%), Gaps = 2/492 (0%)
Query: 85 LLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISM 144
L L+ L P ++ S I+ACA ++L + IH++ + A F+ NSLI M
Sbjct: 47 LRELDLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHM 106
Query: 145 YMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSF 204
Y K G SDA V+ ++VS+ LI G+ +N P + + MLR P F+F
Sbjct: 107 YCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTF 166
Query: 205 AGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE 264
L+ G +H L VK L+ + +VG+ ++ +Y++ + A + F ++
Sbjct: 167 TSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDS 226
Query: 265 KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ 324
K+ +SWN IA + D E L F EM + G FT++S+ +A A + +++ G+
Sbjct: 227 KNEVSWNALIAGFARKGDGETTLMKFAEMQRN-GFGATHFTYSSVFSALARIGALEQGRW 285
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
+HAH+I+ V N ++ MYAK G + + K+F+ + R++V+WNT++ A A + L
Sbjct: 286 VHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGL 345
Query: 385 GGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFT 444
G A+ FE+++ GI+ + +TF+ +LTAC+H GLVKEG+ YF+ M K Y + P+I+H+
Sbjct: 346 GKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMM-KDYNVEPEIDHYV 404
Query: 445 CLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPT 504
+DLLGRAG L EA + K P+ V G LL ACR+ ++ IG+ A +F L P
Sbjct: 405 SFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPE 464
Query: 505 TTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSK 564
T P VLL N+YAS G W D A RKM+K +G+KKEP+ S +E++ + F + +H K
Sbjct: 465 DTGPPVLLYNIYASTGQWDDAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPK 524
Query: 565 IGEINYMLKTLS 576
EI M + ++
Sbjct: 525 SEEIYRMWEEVN 536
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 191/389 (49%), Gaps = 8/389 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S++ C+++K L ++H+ + + + D + N ++++Y KCG + AR VFD + R
Sbjct: 67 SIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIPTR 126
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
++VSW+ +I+G+ Q AL M P+ + F S + A G+Q+H
Sbjct: 127 DVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMH 186
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A ++K+ +VG++L+ MY + A+ V+ N VS+NALIAGF E
Sbjct: 187 ALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGE 246
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
F M R G F+++ + L +G +H +K + FV NTI+
Sbjct: 247 TTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTIL 306
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K + +A K F ++++DL++WNT + A + ++ ++ F+E+ +G++ +
Sbjct: 307 GMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRK-YGIQLNQ 365
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK-LFN 362
TF S+L AC+ V+ GKQ + + ++ + V++ + GL+ + +F
Sbjct: 366 ITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFK 425
Query: 363 EMLHRNVVSWNTIIAA---HANHRLGGSA 388
+ W ++ A H N ++G A
Sbjct: 426 MPMEPTAAVWGALLGACRMHKNAKIGQYA 454
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 139/299 (46%), Gaps = 7/299 (2%)
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
G L+L L P + + C+ S +L +H + +L + F+ N+++
Sbjct: 46 GLRELDLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIH 105
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y K + +A F I +D++SW I + + L + +M RP F
Sbjct: 106 MYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRAR-FRPSGF 164
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
TF S L A G+Q+HA ++ L++DV VG+AL++MYA+C + + ++F+ +
Sbjct: 165 TFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWL 224
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+N VSWN +IA A G + L F +M+ G T+ + +A G +++G
Sbjct: 225 DSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGR 284
Query: 425 AYFNSMEKTYGISPDIEHFTC--LIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
M K+ + F ++ + ++G +++A + + +D + T+L+A
Sbjct: 285 WVHAHMIKS---GQKLTAFVANTILGMYAKSGSMVDARKVFDRVD-QRDLVTWNTMLTA 339
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 93/176 (52%), Gaps = 8/176 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+ ++ AL+QG +HA ++K G + V+N +L +YAK G M+ ARKVFD +
Sbjct: 266 TYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRV 325
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+R+LV+W+ M++ Q G A+ F ++ + N+ F S ++AC+ + +G+
Sbjct: 326 DQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGK 385
Query: 121 QIHAYSLKFGYASISFVGN--SLISMYMKVGYSSDALL-VYGEAFEPNLVSFNALI 173
Q + + Y + + S + + + G +AL+ V+ EP + AL+
Sbjct: 386 QY--FDMMKDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALL 439
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 196/597 (32%), Positives = 319/597 (53%), Gaps = 38/597 (6%)
Query: 4 SISSLLHHCSK-TKALQQGISLHAAVLKMGI--QPDVIVSNHVLNLYAKCGKMILARKVF 60
++ S+L CS + L+ G HA LK G + N +L++YA+ G + A+ +F
Sbjct: 164 TLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLF 223
Query: 61 DEMSERN-----LVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAG 112
+ + +V+W+ M+S Q+G A+E M + P+ FASA+ AC+
Sbjct: 224 GSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQ 283
Query: 113 IQSLVKGQQIHAYSLK-FGYASISFVGNSLISMYM---KVGYSSDAL-LVYGEAFEPNLV 167
++ L G+++HAY LK A+ SFV ++L+ MY +VG + +V G + L
Sbjct: 284 LEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGL- 342
Query: 168 SFNALIAGFVENQQPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCL 226
+NA++ G+ + E+ E+F M + G++P + AG L C+ S +H
Sbjct: 343 -WNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGY 401
Query: 227 TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKG 286
+K + NPFV N +M LY++ + A F IE +D++SWNT I C
Sbjct: 402 VLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDA 461
Query: 287 LSVFKEM-----------------SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
+ +EM +++ V P++ T ++L CA LA+ GK+IH +
Sbjct: 462 FQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYA 521
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
+R L+ D+ VG+ALV+MYAKCG ++ S +F+ + RNV++WN +I A+ H LG A+
Sbjct: 522 MRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAI 581
Query: 390 KLFEQMKATG-IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID 448
LF++M + KP+ VTFI L AC+H+G+V G F+SM++ +G+ P + C +D
Sbjct: 582 ALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVD 641
Query: 449 LLGRAGKLLEAEEYTKKFPLGQDPI-VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTS 507
+LGRAG+L EA G+ + + L ACRL R+V +GE A++LF L+P S
Sbjct: 642 ILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEAS 701
Query: 508 PYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSK 564
YVLL N+Y++ G+W + R ++ G+ KEP S IE+ G +F E +H +
Sbjct: 702 HYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPE 758
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 230/483 (47%), Gaps = 43/483 (8%)
Query: 23 SLHAAVLKM----GIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGH 78
S+H A L+ G P V+N +L YA+CG + A +F+ M R+ V+++++I+
Sbjct: 80 SIHGAALRRDLLHGFTP--AVANALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAAL 137
Query: 79 HQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGI-QSLVKGQQIHAYSLKFGY-- 131
L AL+ M H L + + S + AC+ + + L G++ HA++LK G+
Sbjct: 138 CLFRRWLPALDALRDMLLEGHPL-SSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLD 196
Query: 132 ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPN-----LVSFNALIAGFVENQQPEKGF 186
F N+L+SMY ++G DA +++G + +V++N +++ V++ + +
Sbjct: 197 GDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAI 256
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK-CKLESNPFVGNTIMAL 245
EV M+ +G+ PD +FA L CS L G +H +K L +N FV + ++ +
Sbjct: 257 EVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDM 316
Query: 246 YSKFNLIGEAEKAFRLIE--EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
Y+ +G A + F ++ + L WN + + E+ L +F M + GV P +
Sbjct: 317 YASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSE 376
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T A +L ACA + + +H ++++ + + V NAL+++YA+ G + + +F
Sbjct: 377 TTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAA 436
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG------------------IKPDSV 405
+ R+VVSWNT+I A +L +M+ G + P++V
Sbjct: 437 IEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNV 496
Query: 406 TFIGLLTACNH-AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTK 464
T + LL C A K E + +M + + DI + L+D+ + G L +
Sbjct: 497 TLMTLLPGCAMLAAPAKGKEIHGYAMR--HALDSDIAVGSALVDMYAKCGCLALSRAVFD 554
Query: 465 KFP 467
+ P
Sbjct: 555 RLP 557
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 193/399 (48%), Gaps = 19/399 (4%)
Query: 99 NEYIFASAISACAGIQSLVKGQQIHAYSLKFG--YASISFVGNSLISMYMKVGYSSDALL 156
+ + A + A ++SL+ + IH +L+ + V N+L++ Y + G + AL
Sbjct: 58 DHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALA 117
Query: 157 VYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS-VSN 215
++ + V+FN+LIA ++ + + ML +G F+ L CS ++
Sbjct: 118 LFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAE 177
Query: 216 DLRKGMILHCLTVKCKL--ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKD-----LI 268
DLR G H +K F N ++++Y++ L+ +A+ F ++ D ++
Sbjct: 178 DLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVV 237
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
+WNT ++ + + V +M GVRPD TFAS L AC+ L + G+++HA+
Sbjct: 238 TWNTMVSLLVQSGRCGEAIEVIYDMVA-RGVRPDGITFASALPACSQLEMLSLGREMHAY 296
Query: 329 LIR-MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML--HRNVVSWNTIIAAHANHRLG 385
+++ L + V +ALV+MYA + + ++F+ + HR + WN ++ +A +
Sbjct: 297 VLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMD 356
Query: 386 GSALKLFEQMKA-TGIKPDSVTFIGLLTACNHAGLVKEGEAYFN-SMEKTYGISPDIEHF 443
AL+LF +M+A G+ P T G+L AC + EA +++ +P +++
Sbjct: 357 EEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQN- 415
Query: 444 TCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
L+DL R G +EA + +D + TL++ C
Sbjct: 416 -ALMDLYARLGD-MEAARWIFAAIEPRDVVSWNTLITGC 452
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 99/262 (37%), Gaps = 45/262 (17%)
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV--GVGNALVNMYAKCGLISCSYK 359
D F + A L S+ + IH +R L V NAL+ YA+CG ++ +
Sbjct: 58 DHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALA 117
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH--- 416
LFN M R+ V++N++IAA R AL M G S T + +L AC+H
Sbjct: 118 LFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAE 177
Query: 417 -----------------------------------AGLVKEGEAYFNSMEKTYGISPDIE 441
GLV + + F S++ T +
Sbjct: 178 DLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVV 237
Query: 442 HFTCLIDLLGRAGKLLEAEEYTKKF---PLGQDPIVLGTLLSACRLRRDVVIGERLAKQL 498
+ ++ LL ++G+ EA E + D I + L AC + +G + +
Sbjct: 238 TWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYV 297
Query: 499 FHLQPTTTSPYV--LLSNLYAS 518
+ +V L ++YAS
Sbjct: 298 LKDSDLAANSFVASALVDMYAS 319
>gi|2191182|gb|AAB61067.1| similar to N. tabacum membrane-associated salt-inducible protein
(PID:g473874) [Arabidopsis thaliana]
Length = 597
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 197/584 (33%), Positives = 311/584 (53%), Gaps = 42/584 (7%)
Query: 7 SLLHHCSK-TKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
SLL C+ TK+L++ +H +L +G++ DV++ ++N+Y C AR VF+
Sbjct: 35 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDI 94
Query: 66 RNLV---------SWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGI 113
R+ V SW+ +IS +Q+GE ALE F +M PN AISAC+ +
Sbjct: 95 RSDVYIWNSLMSASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRL 154
Query: 114 QSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALI 173
L +G++IH +K G+ +V ++L+ MY K A V+ + +LV++N++I
Sbjct: 155 LWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMI 214
Query: 174 AGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE 233
G+V + E+ M+ +G P + + L CS S +L G +H
Sbjct: 215 KGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHA-------- 266
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
NL AE F ++ SWN I++ ++ K + V+ +M
Sbjct: 267 ----------------NL---AETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQM 307
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
+ GV+PD TF S+L AC+ LA+++ GKQIH + RL D + +AL++MY+KCG
Sbjct: 308 VS-VGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGN 366
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
++++FN + ++VVSW +I+A+ +H AL F++M+ G+KPD VT + +L+A
Sbjct: 367 EKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSA 426
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C HAGL+ EG +F+ M YGI P IEH++C+ID+LGRAG+LLEA E ++ P D
Sbjct: 427 CGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNA 486
Query: 474 -VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKML 532
+L TL SAC L + +G+R+A+ L P S Y++L NLYAS W R +
Sbjct: 487 ELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKM 546
Query: 533 KDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
K+ GL+K+P S IE+ F + SH + + L LS
Sbjct: 547 KEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLS 590
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 185/541 (34%), Positives = 303/541 (56%), Gaps = 7/541 (1%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
CS+ ++ G LH L + V N +L +Y CG++ ARKVFD M E+++VSW
Sbjct: 132 CSELLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSW 191
Query: 72 SAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAIS---ACAGIQSLVKGQQIHAYSLK 128
+ MI+G+ + G AL F+QM E AS +S AC ++ L G+++H ++
Sbjct: 192 NTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGL-VE 250
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
V N+L+ MY K G +A LV+ E ++VS+ ++I G++ N + +
Sbjct: 251 EKVLGKKIVSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSL 310
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
FK+M +GL P+ + A L C+ N+L+ G LH +K +L S V +++ +Y+K
Sbjct: 311 FKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAK 370
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
N +G + F K + WN ++ C H + + +FK+M + GV + T S
Sbjct: 371 CNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLME-GVEINAATCNS 429
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH-- 366
+L A LA +Q I+++L+R ++ V +L+++Y+KCG + ++K+FN +
Sbjct: 430 LLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDV 489
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
+++ W+ IIA + H G +A+ LF+QM +G+KP+ VTF +L +C+HAG+V +G
Sbjct: 490 QDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYL 549
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRR 486
F M K + P+ +H+TC++DLLGRAG++ EA + K P V G LL AC +
Sbjct: 550 FKFMLKDHQTIPNDDHYTCMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGACVMHE 609
Query: 487 DVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMI 546
+V +GE A+ LF L+P T YVLL+ LYA+ G W D R+ + D GL+K P++S+I
Sbjct: 610 NVELGEVAARWLFELEPGNTGNYVLLAKLYAALGRWEDAENVRQRMDDIGLRKAPAHSLI 669
Query: 547 E 547
E
Sbjct: 670 E 670
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/481 (28%), Positives = 244/481 (50%), Gaps = 12/481 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
SLL H ++L LHA ++ G+ + + + ++ YA CG + ARK+FDE+ +R
Sbjct: 26 SLLKHYGAAQSLTSTKQLHAHLITSGLL-SIDIRSVLVATYAHCGYVHNARKLFDELRQR 84
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQI 122
+ ++ MI + G++ A++ F +M P+ Y + I AC+ + + G+ +
Sbjct: 85 GTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVL 144
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H +L + S FV NSL++MYM G +A V+ E ++VS+N +I G+ +N
Sbjct: 145 HGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFA 204
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
VF M+ G+ D S L C +L G +H L V+ K+ V N +
Sbjct: 205 NTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGL-VEEKVLGKKIVSNAL 263
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y+K + EA F + E+D++SW + I D + LS+FK M + G+RP+
Sbjct: 264 VDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIE-GLRPN 322
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
T A IL ACA L +++ G+ +H +++ RL +V V +L++MYAKC + S+ +F
Sbjct: 323 SVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFT 382
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+ V WN +++ +++L A+ LF++M G++ ++ T LL A G++ +
Sbjct: 383 RTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPA---YGILAD 439
Query: 423 GEAY--FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+ NS G +I+ T LID+ + G L A + P+ I + +++
Sbjct: 440 LQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIII 499
Query: 481 A 481
A
Sbjct: 500 A 500
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 184/362 (50%), Gaps = 5/362 (1%)
Query: 96 LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL 155
L P + S + QSL +Q+HA+ + G SI + + L++ Y GY +A
Sbjct: 17 LAPKTTQYQSLLKHYGAAQSLTSTKQLHAHLITSGLLSID-IRSVLVATYAHCGYVHNAR 75
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLML-RQGLLPDRFSFAGGLEICSVS 214
++ E + + +N +I ++ + +VF ML + PD +++ ++ CS
Sbjct: 76 KLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSEL 135
Query: 215 NDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFI 274
+ G +LH LT+ K S+ FV N+++A+Y + EA K F ++EK ++SWNT I
Sbjct: 136 LLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMI 195
Query: 275 AACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRL 334
L VF +M D GV D + S+L AC L ++ G+++H + L
Sbjct: 196 NGYFKNGFANTALVVFNQMV-DSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEKVL 254
Query: 335 NQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQ 394
+ + V NALV+MYAKCG + + +F+ M+ R+VVSW ++I + + SAL LF+
Sbjct: 255 GKKI-VSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKI 313
Query: 395 MKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
M+ G++P+SVT +L AC +K+G + K + ++ T LID+ +
Sbjct: 314 MQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQR-LYSEVAVETSLIDMYAKCN 372
Query: 455 KL 456
L
Sbjct: 373 CL 374
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 133/296 (44%), Gaps = 19/296 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I+ +L C+ L+ G LH V+K + +V V ++++YAKC + L+ VF
Sbjct: 325 TIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRT 384
Query: 64 SERNLVSWSAMISG--HHQAGEHLLALEFFSQMHLLPNEYIFA---SAISACAGIQSLVK 118
S + V W+A++SG H++ A+ F +M + E A S + A + L
Sbjct: 385 SRKKTVPWNALLSGCVHNKLATE--AIGLFKKMLMEGVEINAATCNSLLPAYGILADLQP 442
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGE--AFEPNLVSFNALIAGF 176
I++Y ++ G+ S V SLI +Y K G A ++ ++ ++ +IAG+
Sbjct: 443 VNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGY 502
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
+ E +FK M++ G+ P+ +F L+ CS + + G+ L K L+ +
Sbjct: 503 GMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYL----FKFMLKDHQ 558
Query: 237 FVGNT--IMALYSKFNLIGEAEKAFRLIEEKDLIS----WNTFIAACSHCADYEKG 286
+ N + G ++A+ LI+ + W + AC + E G
Sbjct: 559 TIPNDDHYTCMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGACVMHENVELG 614
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +SLL LQ ++++ +++ G ++ V+ ++++Y+KCG + A K+F+
Sbjct: 424 AATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFN 483
Query: 62 EM--SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSL 116
+ +++ WS +I+G+ G A+ F QM + PN+ F S + +C+ +
Sbjct: 484 TIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMV 543
Query: 117 VKGQQIHAYSLK 128
G + + LK
Sbjct: 544 DDGLYLFKFMLK 555
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 191/624 (30%), Positives = 314/624 (50%), Gaps = 80/624 (12%)
Query: 34 QPDVIVSNHVLNLYAKCGKMILARKVFDE--MSERNLVSWSAMISGHHQAGEHLLALEFF 91
QPD++ ++ Y+ G + L+RK+F + + R+ V ++AMI+ + + A+E F
Sbjct: 76 QPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELF 135
Query: 92 SQM---HLLPNEYIFASAISACAGIQSLVKG-QQIHAYSLKFGYASISFVGNSLISMYMK 147
M + P+ Y F S + A A + K QQ+H +K G ++ V N+LIS Y+K
Sbjct: 136 CDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVK 195
Query: 148 VGYS---------SDALLVYGEAFEPNLVSFNALIAGFVENQQPE--------------- 183
S ++A ++ E + +S+ +I G+V+N +
Sbjct: 196 CAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGV 255
Query: 184 ----------------KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLT 227
+ FE+F+ M+ + D F+F + +C+ + R G +H
Sbjct: 256 AWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYF 315
Query: 228 VKCKLESNPFVG----NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY 283
+K P V N ++ Y K + A++ F + E+DL+SWN ++ +
Sbjct: 316 LKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCM 375
Query: 284 EKGLSVFKEMSNDH------------------------------GVRPDDFTFASILAAC 313
++ S F EM + G P D+ FA + +C
Sbjct: 376 DEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISC 435
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
+ L S++HG+Q+HA ++R + GNAL+ MYA+CG++ ++ LF M + +SWN
Sbjct: 436 SVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWN 495
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT 433
+IAA H G A++LFE+M GI PD ++F+ +++AC+HAGLVKEG YF+SM
Sbjct: 496 AMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNV 555
Query: 434 YGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGER 493
YG++PD EH+ +IDLL RAGK EA+E + P + LL+ CR+ ++ +G
Sbjct: 556 YGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIE 615
Query: 494 LAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFE 553
A++LF L+P YVLLSN+YA G W D+A RK+++D G+KKEP S IEV+
Sbjct: 616 AAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVH 675
Query: 554 KFTVAEFSHSKIGEINYMLKTLSL 577
F V + +H ++ +I L+ L L
Sbjct: 676 SFLVGDANHPEVRQIYNYLEQLVL 699
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 204/464 (43%), Gaps = 88/464 (18%)
Query: 14 KTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGK---------MILARKVFDEMS 64
K K QQ LH AV+K G V N +++ Y KC M ARK+FDEM
Sbjct: 163 KEKHCQQ---LHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMP 219
Query: 65 ERNLVSWS-------------------------------AMISGHHQAGEHLLALEFFSQ 93
R+ +SW+ AMISG+ G +L A E F +
Sbjct: 220 NRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRK 279
Query: 94 M---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKF---GYASISF-VGNSLISMYM 146
M + +E+ F S IS CA G+++HAY LK ++ V N+LI+ Y
Sbjct: 280 MIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYW 339
Query: 147 KVGYSSDALLVYGEAFEPNLVSFNALIAGFVE-----------NQQPEK----------- 184
K G A ++ + E +LVS+N +++G+V N+ PEK
Sbjct: 340 KCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISG 399
Query: 185 ----GF-----EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
GF + F M QG P ++FAG + CSV L+ G LH V+ ES+
Sbjct: 400 LAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESS 459
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
GN ++ +Y++ ++ A F + D ISWN IAA + + +F+EM
Sbjct: 460 LSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLK 519
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLI 354
+ G+ PD +F ++++AC+ V+ G++ + + +N D ++++ + G
Sbjct: 520 E-GILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKF 578
Query: 355 SCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLG-GSALKLFE 393
S + ++ M W ++A H N LG +A +LFE
Sbjct: 579 SEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFE 622
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 197/455 (43%), Gaps = 89/455 (19%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKM--GIQPDVI--VSNHVLNLYAKCGKMILARKV 59
+ +S++ C+ + G +HA LK PDV V+N ++ Y KCGK+ +A+++
Sbjct: 291 TFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEI 350
Query: 60 FDEMSERNLVSWS-------------------------------AMISGHHQAGEHLLAL 88
F++M ER+LVSW+ MISG Q G AL
Sbjct: 351 FNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEAL 410
Query: 89 EFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMY 145
+FF++M L P +Y FA AI +C+ + SL G+Q+HA +++GY S GN+LI+MY
Sbjct: 411 KFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMY 470
Query: 146 MKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA 205
+ G A ++ + +S+NA+IA ++ Q + E+F+ ML++G+LPDR SF
Sbjct: 471 ARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFL 530
Query: 206 GGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK 265
+ CS + +++G ++++ + + + E R+I
Sbjct: 531 TVISACSHAGLVKEGR------------------KYFDSMHNVYGVNPDEEHYARII--- 569
Query: 266 DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
DL+ S KE+ P + ++LA C ++ G +
Sbjct: 570 DLLC-------------RAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEA 616
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV-----VSW-------N 373
L ++ D G L NMYA G + K+ M R V SW +
Sbjct: 617 AERLFELKPQHD-GTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVH 675
Query: 374 TIIAAHANHRLGGSALKLFEQ----MKATGIKPDS 404
+ + ANH EQ M+ G PD+
Sbjct: 676 SFLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDT 710
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 76/186 (40%), Gaps = 49/186 (26%)
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQH--GKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
M+ +R + S+L C + + + + +HAH+I + N L+++Y+K
Sbjct: 1 MTTPDSIRTAANRYGSLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSK 60
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHA------------------------------ 380
++ + LF+E+ ++V+ T+IAA++
Sbjct: 61 SSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMIT 120
Query: 381 ----NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA----------CN--HAGLVKEGE 424
NH G +A++LF M+ +PD+ TF +L A C H +VK G
Sbjct: 121 AYSHNHD-GHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGT 179
Query: 425 AYFNSM 430
+ S+
Sbjct: 180 GFVTSV 185
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 190/607 (31%), Positives = 313/607 (51%), Gaps = 41/607 (6%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYA--KCGKMILARKVFDEMS 64
S+L C K+L Q + A ++ G+ + ++ ++ A + ++ ++ +
Sbjct: 62 SILERC---KSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRIK 118
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQ 120
E N+ SW+A I G+ ++G+ + +M L P+ + + + C G S G
Sbjct: 119 ELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGL 178
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+ + LKFG+ FV N+ I+M + G S A V+ ++ +LV++N++I G V+
Sbjct: 179 GVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRG 238
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHC--------------- 225
+ +++K M + + P+ + G + CS DL G HC
Sbjct: 239 LAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTN 298
Query: 226 ----LTVKC-----------KLESNPFVGNTIMAL-YSKFNLIGEAEKAFRLIEEKDLIS 269
+ VKC + V T M L Y++F + A + I EK ++
Sbjct: 299 ALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVP 358
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
WN I+ C ++ L++F EM + PD T + L+AC+ L ++ G IH ++
Sbjct: 359 WNAIISGCVQAKQGKEALALFHEM-QIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYI 417
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
R +L+ DV +G ALV+MYAKCG I+ + ++F E+ RN ++W +I A H AL
Sbjct: 418 ERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDAL 477
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
F +M GI PD +TF+G+L+AC H GLV+EG YF+ M + +SP ++H++C++DL
Sbjct: 478 SYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDL 537
Query: 450 LGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPY 509
LGRAG L EAEE K P+ D VLG L ACR+ +V IGER A +L + P + Y
Sbjct: 538 LGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNY 597
Query: 510 VLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEIN 569
VLL+++Y+ MW + ARK++ D G++K P S++E+ G +F V + SH + I
Sbjct: 598 VLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSLVEINGIVHEFVVRDVSHPQSEWIY 657
Query: 570 YMLKTLS 576
L TL+
Sbjct: 658 ECLVTLT 664
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 181/535 (33%), Positives = 291/535 (54%), Gaps = 15/535 (2%)
Query: 55 LARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACA 111
L K FD ++ SW+++I+ + G+ +L FS M L PN F AI +C+
Sbjct: 37 LFNKYFDRT---DVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCS 93
Query: 112 GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNA 171
+ L G+Q H +L FG+ S FV ++LI MY K G S+A +++ E N+V++ +
Sbjct: 94 ALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTS 153
Query: 172 LIAGFVENQQPEKGFEVFKLMLRQ---------GLLPDRFSFAGGLEICSVSNDLRKGMI 222
LI G+V+N + VFK L + G D + L CS ++
Sbjct: 154 LITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEG 213
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
+H + +K L+ V NT++ Y+K + + K F + EKD++SWN+ IA +
Sbjct: 214 VHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGL 273
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
VF M G + ++ T +++L ACA +++ G +H +I+M +V +
Sbjct: 274 STDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMAT 333
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
++++MY KCG + F+ M +NV SW +IA + H AL +F QM G+KP
Sbjct: 334 SIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKP 393
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
+ +TFI +L AC+HAG ++EG +FN+M Y + P +EH+ C++DLLGRAG + EA
Sbjct: 394 NYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNL 453
Query: 463 TKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMW 522
K + +D ++ G+LL+ACR+ +DV + E A++LF L P+ YVLL+N+YA G W
Sbjct: 454 IKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRW 513
Query: 523 GDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
DV R ++KD GL K P YS++E++G F V + H + +I L+ LS+
Sbjct: 514 KDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSV 568
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 193/388 (49%), Gaps = 18/388 (4%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
CS L G H L G + D+ VS+ ++++Y+KCGK+ AR +FDE+ RN+V+W
Sbjct: 92 CSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTW 151
Query: 72 SAMISGHHQAGEHLLALEFFSQMHLLPNE------------YIFASAISACAGIQSLVKG 119
+++I+G+ Q + AL F + +E S +SAC+ + +
Sbjct: 152 TSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVS 211
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ +H ++K G + V N+L+ Y K G S + V+ + E ++VS+N++IA + +N
Sbjct: 212 EGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQN 271
Query: 180 QQPEKGFEVFKLMLRQGLLP-DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
FEVF ML+ G + + + L C+ LR GM LH +K +N +
Sbjct: 272 GLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIM 331
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
+I+ +Y K A AF ++EK++ SW IA + L VF +M G
Sbjct: 332 ATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIW-AG 390
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN--ALVNMYAKCGLISC 356
V+P+ TF S+LAAC+ ++ G + + + N + GV + +V++ + G I
Sbjct: 391 VKPNYITFISVLAACSHAGFLEEGWRWF-NAMSHEYNVEPGVEHYGCMVDLLGRAGYIKE 449
Query: 357 SYKLFNEM-LHRNVVSWNTIIAAHANHR 383
+Y L M + R+ V W +++AA H+
Sbjct: 450 AYNLIKSMKVRRDFVLWGSLLAACRIHK 477
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 147/286 (51%), Gaps = 10/286 (3%)
Query: 7 SLLHHCSKT--KALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
S+L CS+ KA+ +G+ H +K+G+ + V N +L+ YAKCG++ L+RKVFD+M+
Sbjct: 197 SVLSACSRVSNKAVSEGV--HGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMA 254
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP----NEYIFASAISACAGIQSLVKGQ 120
E+++VSW++MI+ + Q G A E F M NE ++ + ACA +L G
Sbjct: 255 EKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGM 314
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H +K GY + + S+I MY K G + A + E N+ S+ A+IAG+ +
Sbjct: 315 CLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHG 374
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVG 239
+ +VF M+ G+ P+ +F L CS + L +G + ++ + +E
Sbjct: 375 FAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHY 434
Query: 240 NTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYE 284
++ L + I EA + ++ +D + W + +AAC D E
Sbjct: 435 GCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVE 480
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 107/201 (53%), Gaps = 17/201 (8%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++S+LL C+ AL+ G+ LH V+KMG +VI++ ++++Y KCG+ +AR FD M
Sbjct: 296 TLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGM 355
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
E+N+ SW+AMI+G+ G AL+ F QM + PN F S ++AC+ L +G
Sbjct: 356 KEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGW 415
Query: 121 QI-----HAYSLKFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIA 174
+ H Y+++ G + G ++ + + GY +A L+ + V + +L+A
Sbjct: 416 RWFNAMSHEYNVEPG---VEHYG-CMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLA 471
Query: 175 GFVENQQPE----KGFEVFKL 191
++ E E+FKL
Sbjct: 472 ACRIHKDVELAEISARELFKL 492
>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Vitis vinifera]
Length = 625
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 181/582 (31%), Positives = 318/582 (54%), Gaps = 12/582 (2%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
LH K+L+ H+ +L +G+ + +++ ++ YA C +R VFD + +N+
Sbjct: 30 LHFSVTHKSLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNV 89
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAY 125
W+++I+G+ + + A + F+QM +LP+++ ++ + + +L G+ IH
Sbjct: 90 FLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGK 149
Query: 126 SLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ---P 182
S++ G+ S + V NS++SMY K G ++ V+ E N S+N LIAG+ +
Sbjct: 150 SIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFR 209
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN-DLRKGMILHCLTVKCKL----ESNPF 237
E+ +E K M + PD ++ + L +C G LHC VK +L +S+
Sbjct: 210 EETWEFVKQMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVH 269
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+G ++ +YS+ N + + F ++ +++ SW I D ++ LS+F++M
Sbjct: 270 LGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVID 329
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G+ P+ + S+L AC+ + + G+QIH +R LN +V + NAL++MY+KCG + +
Sbjct: 330 GIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSA 389
Query: 358 YKLF-NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
++F ++ L ++ +SW+++I+ + H G A+ L+++M GI+PD +T +G+L+AC+
Sbjct: 390 RRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSR 449
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
+GLV EG ++S+ YGI P +E F C++D+LGRAG+L A ++ K P+ P V G
Sbjct: 450 SGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWG 509
Query: 477 TLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSG 536
L+S + D+ + E + L L+P S YV +SNLYAS W VA R+M+KD
Sbjct: 510 ALVSCSIIHGDLEMQELAYRFLIQLEPENPSNYVSISNLYASSRRWDAVAEVRRMMKDKR 569
Query: 537 LKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSLA 578
L+K P S I + F VA+ +H I ML L L
Sbjct: 570 LRKVPGCSWISINNKTHCFYVADKAHPSATSIYNMLDDLLLT 611
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 177/347 (51%), Gaps = 28/347 (8%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++S+L S+ AL G S+H +++G D +V+N ++++Y KCG +RKVFDEM
Sbjct: 126 TLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEM 185
Query: 64 SERNLVSWSAMISGHHQAGE---HLLALEFFSQMHL---LPNEYIFASAISACAGIQSLV 117
+ RN SW+ +I+G+ +G EF QM + P+ Y +S + C G +
Sbjct: 186 TIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDKGKW 245
Query: 118 K-GQQIHAYSLK----FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE----PNLVS 168
G+++H Y +K G S +G LI MY + S+ ++V F+ N+ S
Sbjct: 246 DYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSR----SNKVVVGRRVFDRMKCRNVFS 301
Query: 169 FNALIAGFVENQQPEKGFEVFKLM-LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLT 227
+ A+I G+VEN ++ +F+ M + G+ P+R S L CS + L G +H
Sbjct: 302 WTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFA 361
Query: 228 VKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE----KDLISWNTFIAACSHCADY 283
V+ +L + + N ++ +YSK G + A R+ E+ KD ISW++ I+
Sbjct: 362 VRKELNNEVSLCNALIDMYSK---CGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKG 418
Query: 284 EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
++ + ++ +M G+RPD T IL+AC+ V G I++ +I
Sbjct: 419 QEAILLYDKMLQ-AGIRPDMITTVGILSACSRSGLVNEGLNIYSSVI 464
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 189/581 (32%), Positives = 304/581 (52%), Gaps = 14/581 (2%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
++ +SLL C K L+Q +HA +L I N L A A F
Sbjct: 31 LSDKFNSLLQQCLSIKQLKQ---IHAQLLTNSIHK----PNSFLYKIADLKDFAYASVFF 83
Query: 61 DEMSERNLVSWSAMISGHHQA-GEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSL 116
+ + S++ MI G A + LALEF+S+M L PN + AC+ + ++
Sbjct: 84 SNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAV 143
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G+ H ++ G V +SLI+MY + G DA V+ E + +LVS+N++I+G+
Sbjct: 144 ENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGY 203
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
+ + + +F+ M+ G P+ S L C DL+ G + V+ K+ N
Sbjct: 204 SKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNY 263
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
F+G+ ++ +Y K + A + F +++KD ++WN I + E+ + +F++M
Sbjct: 264 FMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMS 323
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
PD T IL+ACA + ++ GKQ+ + DV VG ALV+MYAKCG +
Sbjct: 324 -STAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDN 382
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG--IKPDSVTFIGLLTAC 414
++++F M +N VSWN +I+A A H AL LF+ M G + P+ +TF+G+L+AC
Sbjct: 383 AFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSAC 442
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
HAGLV EG F+ M ++G+ P IEH++C++DL RAG L EA ++ P D ++
Sbjct: 443 VHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVI 502
Query: 475 LGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKD 534
LG LL AC+ R+++ I ER+ K L L+P+ + YV+ S LYA+ W D A R ++K
Sbjct: 503 LGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQ 562
Query: 535 SGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
G+ K P S I++ +F + H + EI+ +L L
Sbjct: 563 KGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQILDLL 603
>gi|147836510|emb|CAN70889.1| hypothetical protein VITISV_005594 [Vitis vinifera]
Length = 630
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 200/584 (34%), Positives = 320/584 (54%), Gaps = 26/584 (4%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L C+ + L+ G +H +LK G+ +V V+N ++++YAKCG++ A K+FD M ++
Sbjct: 48 VLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAKLFDHMPDKT 107
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM--HLLPNEYIFASAISACAGIQSLVKGQQIHAY 125
+VSW++M+SGH Q G + F +M L PNEY A + ACA + L Q IH +
Sbjct: 108 VVSWTSMMSGHCQRGAFDEVISIFWRMLETLQPNEYTLAVILQACAQKRDLKLVQLIHCH 167
Query: 126 SLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKG 185
+K G+ +F+ NSLI Y K G A + ++VS+ ++I+G V N EK
Sbjct: 168 IIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSWTSVISGCVLNGMVEKA 227
Query: 186 FEVFKLMLRQGLLPDR--------FSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
F M G+ P+ + A L+ CS S L+ G +H +K
Sbjct: 228 LLFFFEMQEDGVSPNTGDGQYLSTETIATLLQGCSHSKCLKLGEQIHGYQIKHGFFPCTI 287
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N+++ +Y++ A + FR + +D++SWNT I++ + + L + E+ ++
Sbjct: 288 VENSLIYMYAENERDDAAFQLFRKMSCRDIVSWNTMISSLVKGSSSYQALMLLSEVHSNG 347
Query: 298 G---VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
G + PD T + + AC+ LAS+Q G+ IH ++ R L D+ V N+LV+MY KCG +
Sbjct: 348 GSDMIYPDFVTILASIQACSSLASLQLGQVIHGYITRAGLICDIFVQNSLVDMYGKCGRL 407
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGI-KPDSVTFIGLLTA 413
+ K+ EM R++ SWN++IAA+ + G SAL +F+Q+K TG +P+++TF +L+A
Sbjct: 408 HLAEKVSEEMPVRDLGSWNSLIAAYGINGNGISALNVFKQLKNTGAHRPNAITFTNILSA 467
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C HAGLV EG F SM++ Y + P IEHF C + E + +K P P
Sbjct: 468 CAHAGLVAEGFEIFKSMKREYSLEPRIEHFAC-----------MRPEAFIQKMPFEPGPE 516
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGAR-KML 532
V G LL C L ++ I ER+AK+L L+P + + V LSN+YAS W D A R +M
Sbjct: 517 VWGALLGGCGLFGNLDIAERVAKKLXILEPKSRAWRVALSNVYASVNKWEDAAKVRAEMR 576
Query: 533 KDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
+ L+KE +S +EV+G +F V + H + + +LK ++
Sbjct: 577 RSEELQKEGGWSSVEVRGZEFRFMVGDTMHPEARMVYAVLKGIN 620
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 196/390 (50%), Gaps = 15/390 (3%)
Query: 91 FSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGY 150
+ +H L + +S+CA + L G IH LK G + FV NSL+ MY K G
Sbjct: 33 YPHIHTLSDSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGR 92
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
DA ++ + +VS+ ++++G + ++ +F ML + L P+ ++ A L+
Sbjct: 93 IEDAAKLFDHMPDKTVVSWTSMMSGHCQRGAFDEVISIFWRML-ETLQPNEYTLAVILQA 151
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
C+ DL+ ++HC +K + F+ N+++ Y+K + AEK + + +D++SW
Sbjct: 152 CAQKRDLKLVQLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSW 211
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDHGVRPD--------DFTFASILAACAGLASVQHG 322
+ I+ C EK L F EM D GV P+ T A++L C+ ++ G
Sbjct: 212 TSVISGCVLNGMVEKALLFFFEMQED-GVSPNTGDGQYLSTETIATLLQGCSHSKCLKLG 270
Query: 323 KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH 382
+QIH + I+ V N+L+ MYA+ +++LF +M R++VSWNT+I++
Sbjct: 271 EQIHGYQIKHGFFPCTIVENSLIYMYAENERDDAAFQLFRKMSCRDIVSWNTMISSLVKG 330
Query: 383 RLGGSALKLFEQMKATG----IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISP 438
AL L ++ + G I PD VT + + AC+ ++ G+ + + G+
Sbjct: 331 SSSYQALMLLSEVHSNGGSDMIYPDFVTILASIQACSSLASLQLGQVIHGYITRA-GLIC 389
Query: 439 DIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
DI L+D+ G+ G+L AE+ +++ P+
Sbjct: 390 DIFVQNSLVDMYGKCGRLHLAEKVSEEMPV 419
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 170/343 (49%), Gaps = 15/343 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++ +L C++ + L+ +H ++K G D + N +++ Y K G ++ A K+ +
Sbjct: 144 TLAVILQACAQKRDLKLVQLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRL 203
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPN----EYI----FASAISACAG 112
R++VSW+++ISG G AL FF +M + PN +Y+ A+ + C+
Sbjct: 204 ICRDVVSWTSVISGCVLNGMVEKALLFFFEMQEDGVSPNTGDGQYLSTETIATLLQGCSH 263
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
+ L G+QIH Y +K G+ + V NSLI MY + A ++ + ++VS+N +
Sbjct: 264 SKCLKLGEQIHGYQIKHGFFPCTIVENSLIYMYAENERDDAAFQLFRKMSCRDIVSWNTM 323
Query: 173 IAGFVENQQPEKGFEVFKLMLRQG----LLPDRFSFAGGLEICSVSNDLRKGMILHCLTV 228
I+ V+ + + + G + PD + ++ CS L+ G ++H
Sbjct: 324 ISSLVKGSSSYQALMLLSEVHSNGGSDMIYPDFVTILASIQACSSLASLQLGQVIHGYIT 383
Query: 229 KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLS 288
+ L + FV N+++ +Y K + AEK + +DL SWN+ IAA + L+
Sbjct: 384 RAGLICDIFVQNSLVDMYGKCGRLHLAEKVSEEMPVRDLGSWNSLIAAYGINGNGISALN 443
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
VFK++ N RP+ TF +IL+ACA V G +I + R
Sbjct: 444 VFKQLKNTGAHRPNAITFTNILSACAHAGLVAEGFEIFKSMKR 486
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 109/219 (49%), Gaps = 8/219 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
++I++LL CS +K L+ G +H +K G P IV N ++ +YA+ + A ++F
Sbjct: 251 TETIATLLQGCSHSKCLKLGEQIHGYQIKHGFFPCTIVENSLIYMYAENERDDAAFQLFR 310
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH-------LLPNEYIFASAISACAGIQ 114
+MS R++VSW+ MIS + AL S++H + P+ ++I AC+ +
Sbjct: 311 KMSCRDIVSWNTMISSLVKGSSSYQALMLLSEVHSNGGSDMIYPDFVTILASIQACSSLA 370
Query: 115 SLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIA 174
SL GQ IH Y + G FV NSL+ MY K G A V E +L S+N+LIA
Sbjct: 371 SLQLGQVIHGYITRAGLICDIFVQNSLVDMYGKCGRLHLAEKVSEEMPVRDLGSWNSLIA 430
Query: 175 GFVENQQPEKGFEVFKLMLRQGL-LPDRFSFAGGLEICS 212
+ N VFK + G P+ +F L C+
Sbjct: 431 AYGINGNGISALNVFKQLKNTGAHRPNAITFTNILSACA 469
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 6/207 (2%)
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D T +L++CA ++ G IH ++++ L+ +V V N+L++MYAKCG I + KLF
Sbjct: 41 DSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAKLF 100
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ M + VVSW ++++ H + +F +M T ++P+ T +L AC +K
Sbjct: 101 DHMPDKTVVSWTSMMSGHCQRGAFDEVISIFWRMLET-LQPNEYTLAVILQACAQKRDLK 159
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+ + KT G D LID ++G L+ AE+ K+ + +D + +++S
Sbjct: 160 LVQLIHCHIIKT-GFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRL-ICRDVVSWTSVISG 217
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSP 508
C L V E+ F +Q SP
Sbjct: 218 CVLNGMV---EKALLFFFEMQEDGVSP 241
>gi|356523586|ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 199/574 (34%), Positives = 307/574 (53%), Gaps = 19/574 (3%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
LH CS ++ Q +HA VLK + D+ V+ ++ ++ C + A VF+ + N+
Sbjct: 28 LHKCSNLDSVNQ---IHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNV 84
Query: 69 VSWSAMISGH-HQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
++++I H H L F QM L P+ + + + AC G SL + IHA
Sbjct: 85 HLYNSIIRAHAHNTSHPSLPFNAFFQMQKNGLFPDNFTYPFLLKACTGPSSLPLVRMIHA 144
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYS--SDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
+ KFG+ FV NSLI Y + G + A+ ++ E ++V++N++I G V +
Sbjct: 145 HVEKFGFYGDIFVPNSLIDSYSRCGSAGLDGAMSLFLAMKERDVVTWNSMIGGLVRCGEL 204
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E ++F M + D S+ L+ + + ++ + L + + N +T+
Sbjct: 205 EGACKLFDEMPER----DMVSWNTMLDGYAKAGEMDRAFEL----FERMPQRNIVSWSTM 256
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ YSK + A F K+++ W T IA + + ++ +M + G+RPD
Sbjct: 257 VCGYSKGGDMDMARVLFDRCPAKNVVLWTTIIAGYAEKGFVREATELYGKME-EAGLRPD 315
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
D SILAACA + GK+IHA + R R V NA ++MYAKCG + ++ +F+
Sbjct: 316 DGFLISILAACAESGMLGLGKRIHASMRRWRFRCGTKVLNAFIDMYAKCGCLDAAFDVFS 375
Query: 363 EML-HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
M+ ++VVSWN++I A H G AL+LF +M G +PD+ TF+GLL AC HAGLV
Sbjct: 376 GMMAKKDVVSWNSMIQGFAMHGHGEKALELFSRMVPEGFEPDTYTFVGLLCACTHAGLVN 435
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
EG YF SMEK YGI P +EH+ C++DLLGR G L EA + P+ + I+LGTLL+A
Sbjct: 436 EGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFTLLRSMPMEPNAIILGTLLNA 495
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
CR+ DV + +QLF ++PT Y LLSN+YA G W +VA R + ++G +K
Sbjct: 496 CRMHNDVDFARAVCEQLFKVEPTDPGNYSLLSNIYAQAGDWMNVANVRLQMMNTGGQKPS 555
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S IEV+ +FTV + SH K +I M+ L
Sbjct: 556 GASSIEVEEEVHEFTVFDQSHPKSDDIYKMIDRL 589
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 145/322 (45%), Gaps = 13/322 (4%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMIL--ARKVFDEMSE 65
LL C+ +L +HA V K G D+ V N +++ Y++CG L A +F M E
Sbjct: 126 LLKACTGPSSLPLVRMIHAHVEKFGFYGDIFVPNSLIDSYSRCGSAGLDGAMSLFLAMKE 185
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVK-GQQIHA 124
R++V+W++MI G + GE A + F +M P +S + K G+ A
Sbjct: 186 RDVVTWNSMIGGLVRCGELEGACKLFDEM---PER----DMVSWNTMLDGYAKAGEMDRA 238
Query: 125 YSLKFGYASISFVG-NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ L + V ++++ Y K G A +++ N+V + +IAG+ E
Sbjct: 239 FELFERMPQRNIVSWSTMVCGYSKGGDMDMARVLFDRCPAKNVVLWTTIIAGYAEKGFVR 298
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ E++ M GL PD L C+ S L G +H + + V N +
Sbjct: 299 EATELYGKMEEAGLRPDDGFLISILAACAESGMLGLGKRIHASMRRWRFRCGTKVLNAFI 358
Query: 244 ALYSKFNLIGEAEKAFR-LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+Y+K + A F ++ +KD++SWN+ I + EK L +F M + G PD
Sbjct: 359 DMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSRMVPE-GFEPD 417
Query: 303 DFTFASILAACAGLASVQHGKQ 324
+TF +L AC V G++
Sbjct: 418 TYTFVGLLCACTHAGLVNEGRK 439
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 89/174 (51%), Gaps = 8/174 (4%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE-MSE 65
S+L C+++ L G +HA++ + + V N +++YAKCG + A VF M++
Sbjct: 321 SILAACAESGMLGLGKRIHASMRRWRFRCGTKVLNAFIDMYAKCGCLDAAFDVFSGMMAK 380
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQI 122
+++VSW++MI G G ALE FS+M P+ Y F + AC + +G++
Sbjct: 381 KDVVSWNSMIQGFAMHGHGEKALELFSRMVPEGFEPDTYTFVGLLCACTHAGLVNEGRK- 439
Query: 123 HAYSLKFGYASISFVGN--SLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALI 173
+ YS++ Y + V + ++ + + G+ +A L+ EPN + L+
Sbjct: 440 YFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFTLLRSMPMEPNAIILGTLL 493
>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 183/573 (31%), Positives = 317/573 (55%), Gaps = 5/573 (0%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
++ C L +G +H V+K G+ D+ + N ++ +YAK G + A VF EM R+
Sbjct: 132 VIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRD 191
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
LVSW++MISG+ G+ +L F +M + + + + AC+ L G++IH
Sbjct: 192 LVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHC 251
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
++ V SL+ MY K G A ++ + + ++V++NA+I G+ N Q +
Sbjct: 252 QMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFE 311
Query: 185 GFEVFKLMLRQGLL-PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
F + M G L PD + L C+ + G +H ++ + + ++
Sbjct: 312 SFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALV 371
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y + + AE F + E++LISWN IA+ + + K +++F+++ N ++PD
Sbjct: 372 DMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCN-KTLKPDA 430
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T ASIL A A LAS++ +QIH ++ +++L+ + V N++V MY KCG + + ++F+
Sbjct: 431 TTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDR 490
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M ++V+SWNT+I A+A H G +++LF +M+ G +P+ TF+ LL +C+ AGLV EG
Sbjct: 491 MTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEG 550
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR 483
YFNSM++ Y I+P IEH+ C++DL+GR G L A+ + ++ PL + G+LL+A R
Sbjct: 551 WEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASR 610
Query: 484 LRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSY 543
+ DV + E A+ + L+ T YVLLSN+YA G W DV + +K GL+K
Sbjct: 611 NKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERIKFHMKKEGLEKSVGC 670
Query: 544 SMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
S++++ +F + S ++I + +L +S
Sbjct: 671 SVVDLSSKTFRFVNQDRSDNEINMVYDVLDIIS 703
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/454 (28%), Positives = 225/454 (49%), Gaps = 9/454 (1%)
Query: 33 IQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFS 92
++ + + L+ Y + G M A +F+ M + + W+ MI G G A++F+
Sbjct: 56 VERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYH 115
Query: 93 QMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
+M + + + + I AC G+ L +G+++H +K G ++GNSLI MY K+G
Sbjct: 116 RMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIG 175
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
A +V+ E +LVS+N++I+G+V + F+ M G+ DRFS G L
Sbjct: 176 CIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILG 235
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
CS+ LR G +HC ++ +LE + V +++ +Y+K + AE+ F I +K +++
Sbjct: 236 ACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVA 295
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
WN I S A + + ++M + PD T ++L CA L ++ GK +H
Sbjct: 296 WNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFA 355
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
IR + + ALV+MY +CG + + LF +M RN++SWN +IA++ + A+
Sbjct: 356 IRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAM 415
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF--TCLI 447
LF+ + +KPD+ T +L A ++E E + K + D F ++
Sbjct: 416 TLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTK---LKLDSNTFVSNSIV 472
Query: 448 DLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+ G+ G LL A E + +D I T++ A
Sbjct: 473 FMYGKCGNLLRAREIFDRMTF-KDVISWNTVIMA 505
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 198/384 (51%), Gaps = 7/384 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+ +L CS L+ G +H +++ ++ DV+V ++++YAKCG+M A ++FD++
Sbjct: 229 SVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQI 288
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKG 119
+++++V+W+AMI G+ + + + +M L P+ + + CA +++++ G
Sbjct: 289 TDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLG 348
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ +H ++++ G+ + +L+ MY + G A ++G+ E NL+S+NA+IA + +N
Sbjct: 349 KSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKN 408
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ K +F+ + + L PD + A L + LR+ +H K KL+SN FV
Sbjct: 409 GENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVS 468
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N+I+ +Y K + A + F + KD+ISWNT I A + + +F EM + G
Sbjct: 469 NSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEM-REKGF 527
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIR-MRLNQDVGVGNALVNMYAKCGLISCSY 358
P+ TF S+L +C+ V G + + R +N + ++++ + G + +
Sbjct: 528 EPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAK 587
Query: 359 KLFNEM-LHRNVVSWNTIIAAHAN 381
EM L W +++ A N
Sbjct: 588 NFIEEMPLAPTARIWGSLLTASRN 611
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 144/287 (50%), Gaps = 13/287 (4%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+LL C++ +A+ G S+H ++ G P +++ ++++Y +CGK+ A +F +M+ER
Sbjct: 334 NLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNER 393
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
NL+SW+AMI+ + + GE+ A+ F + L P+ AS + A A + SL + +QIH
Sbjct: 394 NLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIH 453
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
Y K S +FV NS++ MY K G A ++ +++S+N +I + +
Sbjct: 454 GYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGR 513
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN--T 241
E+F M +G P+ +F L CSV+ + +G + ++K NP + +
Sbjct: 514 ISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGW-EYFNSMKRDYNINPGIEHYGC 572
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLIS----WNTFIAACSHCADYE 284
I+ L + G + A IEE L W + + A + D E
Sbjct: 573 ILDLIGR---TGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDVE 616
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 75/133 (56%), Gaps = 4/133 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A +I+S+L ++ +L++ +H V K+ + + VSN ++ +Y KCG ++ AR++FD
Sbjct: 430 ATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFD 489
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
M+ ++++SW+ +I + G +++E FS+M PN F S + +C+ + LV
Sbjct: 490 RMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCS-VAGLVN 548
Query: 119 GQQIHAYSLKFGY 131
+ S+K Y
Sbjct: 549 EGWEYFNSMKRDY 561
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 188/634 (29%), Positives = 329/634 (51%), Gaps = 62/634 (9%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ +L C + + + G + H + G + +V + N ++ +Y++CG + A +FDE+
Sbjct: 119 TLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEI 178
Query: 64 SER---NLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNE---------YIFASAISACA 111
++R +++SW++++S H ++ AL+ FS+M L+ +E + + AC
Sbjct: 179 TQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACG 238
Query: 112 GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNA 171
++++ + +++H +++ G FVGN+LI Y K G +A+ V+ ++VS+NA
Sbjct: 239 SLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNA 298
Query: 172 LIAGFVENQQPEKGFEVFKLMLRQ-----------------------------------G 196
++AG+ ++ + FE+FK M ++ G
Sbjct: 299 MVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSG 358
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK-CKLE-SNPFVG--------NTIMALY 246
LP+ + L C+ +GM +H ++K C L N F G N ++ +Y
Sbjct: 359 SLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMY 418
Query: 247 SKFNLIGEAEKAFRLI--EEKDLISWNTFIAACSHCADYEKGLSVFKEM-SNDHGVRPDD 303
SK A F I EE+++++W I + D L +F EM S +GV P+
Sbjct: 419 SKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNA 478
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG--VGNALVNMYAKCGLISCSYKLF 361
+T + IL ACA LA+++ GKQIHA+++R V N L+NMY+KCG + + +F
Sbjct: 479 YTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVF 538
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ M ++ +SW +++ + H G AL +F++M+ G PD +TF+ +L AC+H G+V
Sbjct: 539 DSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVD 598
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+G +YF+SM YG++P EH+ IDLL R G+L +A + K P+ +V LLSA
Sbjct: 599 QGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSA 658
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
CR+ +V + E +L + Y L+SN+YA+ G W DVA R ++K SG+KK P
Sbjct: 659 CRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRP 718
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S ++ Q F V + SH +I +L++L
Sbjct: 719 GCSWVQGQKGTASFFVGDRSHPLSPQIYALLESL 752
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 147/302 (48%), Gaps = 8/302 (2%)
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
+G +++ Y+ G + ALLV V +N LI ++ + + V MLR G
Sbjct: 53 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 112
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
D F+ L+ C R G H L ESN F+ N ++A+YS+ + EA
Sbjct: 113 TRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 172
Query: 257 KAFRLIEEK---DLISWNTFIAACSHCADYEKGLSVFKEMS-----NDHGVRPDDFTFAS 308
F I ++ D+ISWN+ ++A ++ L +F +M+ R D + +
Sbjct: 173 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 232
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
IL AC L +V K++H + IR DV VGNAL++ YAKCGL+ + K+FN M ++
Sbjct: 233 ILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 292
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
VVSWN ++A ++ +A +LF+ M+ I D VT+ ++ + G E F
Sbjct: 293 VVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFR 352
Query: 429 SM 430
M
Sbjct: 353 QM 354
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 196/442 (44%), Gaps = 60/442 (13%)
Query: 43 VLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPN 99
V+ Y CG A V + ++ V W+ +I H + G A+ +M +
Sbjct: 57 VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLD 116
Query: 100 EYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG 159
+ + AC + S G H G+ S F+ N+L++MY + G +A +++
Sbjct: 117 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 176
Query: 160 EAFE---PNLVSFNALIAGFVENQQPEKGFEVF-KLMLRQGLLP-----DRFSFAGGLEI 210
E + +++S+N++++ V++ ++F K+ L P D S L
Sbjct: 177 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPA 236
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
C + + +H ++ + FVGN ++ Y+K L+ A K F ++E KD++SW
Sbjct: 237 CGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSW 296
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDH--------------------------------- 297
N +A S +++ +FK M ++
Sbjct: 297 NAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIF 356
Query: 298 -GVRPDDFTFASILAACAGLASVQHGKQIHAHLIR---MRLNQDVG-------VGNALVN 346
G P+ T S+L+ACA L + G +IHA+ ++ + L+ D G V NAL++
Sbjct: 357 SGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALID 416
Query: 347 MYAKCGLISCSYKLFNE--MLHRNVVSWNTIIAAHANHRLGGSALKLFEQM--KATGIKP 402
MY+KC + +F++ + RNVV+W +I HA + ALKLF +M + G+ P
Sbjct: 417 MYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAP 476
Query: 403 DSVTFIGLLTACNHAGLVKEGE 424
++ T +L AC H ++ G+
Sbjct: 477 NAYTISCILMACAHLAAIRIGK 498
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 69/116 (59%), Gaps = 7/116 (6%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPD---VIVSNHVLNLYAKCGKMILARK 58
A +IS +L C+ A++ G +HA VL+ Q D V+N ++N+Y+KCG + AR
Sbjct: 478 AYTISCILMACAHLAAIRIGKQIHAYVLRHH-QYDSSAYFVANCLINMYSKCGDVDTARH 536
Query: 59 VFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
VFD MS+++ +SW++M++G+ G AL+ F +M +P++ F + AC+
Sbjct: 537 VFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACS 592
>gi|357512007|ref|XP_003626292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355501307|gb|AES82510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 650
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 198/589 (33%), Positives = 314/589 (53%), Gaps = 19/589 (3%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPD--------VIVSNHVLNLYAKCGKMILA 56
++SLL C + + L G S+HA ++K D + + N +L++Y+KCG+ A
Sbjct: 37 LTSLLTLCGRDRNLTLGSSIHARIIKQPPSFDFDGSQRNALFIWNSLLSMYSKCGEFRNA 96
Query: 57 RKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH------LLPNEYIFASAISAC 110
VFD M R+ VSW+ MISG + G+ + +FF QM ++ + +S C
Sbjct: 97 GNVFDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNRVCCRFDKATLTTMLSGC 156
Query: 111 AGIQ---SLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLV 167
G++ S Q IH G+ VGN+LI+ Y K S V+ E E N+V
Sbjct: 157 DGLRLGISTSVTQMIHGLVFVGGFEREITVGNALITSYFKCECFSQGRKVFDEMIERNVV 216
Query: 168 SFNALIAGFVENQQPEKGFEVFKLMLRQGLL-PDRFSFAGGLEICSVSNDLRKGMILHCL 226
++ A+I+G +N+ E +F M G + P+ ++ L CS LR G +H L
Sbjct: 217 TWTAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQVLRDGQKIHGL 276
Query: 227 TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKG 286
K ++S+ + + +M LYSK + A + F EE D +S + A + E+
Sbjct: 277 LWKLGMQSDLCIESALMDLYSKCGSLDAAWQIFESAEELDGVSLTVILVAFAQNGFEEEA 336
Query: 287 LSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVN 346
+ +F +M G+ D +++L + GKQIH+ +I+ ++ VGN LVN
Sbjct: 337 IQIFTKMVA-LGMEVDANMVSAVLGVFGVGTYLALGKQIHSLIIKKNFCENPFVGNGLVN 395
Query: 347 MYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVT 406
MY+KCG +S S +F +M +N VSWN++IAA A H G AL+ +E+M+ G+ P VT
Sbjct: 396 MYSKCGDLSDSLLVFYQMTQKNSVSWNSVIAAFARHGDGFKALQFYEEMRVEGVAPTDVT 455
Query: 407 FIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
F+ LL AC+HAGLV++G SM +GISP EH+ C++D+LGRAG L EA+++ +
Sbjct: 456 FLSLLHACSHAGLVEKGMELLESMTNDHGISPRSEHYACVVDMLGRAGHLNEAKKFIEGL 515
Query: 467 PLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVA 526
P +V LL AC + D +G+ A +LF P + +PYVL++N+Y+S+G W + A
Sbjct: 516 PEHGGVLVWQALLGACSIHGDSEMGKYAADRLFSAAPASPAPYVLMANIYSSEGNWKERA 575
Query: 527 GARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ K +K+ G+ KE S IE++ F V + H + I ++L L
Sbjct: 576 SSIKRMKEMGVAKEVGISWIEIEKKVNSFVVGDKLHPEADVIFWVLSGL 624
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 192/578 (33%), Positives = 322/578 (55%), Gaps = 5/578 (0%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++SS+L C+K +++G + ++G + DV+V+ +++L+AKCG + A VF
Sbjct: 68 AYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFR 127
Query: 62 EM-SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLV 117
M + R+++S +AMI + + G++ LAL+ + +M L P+ + +A+ + AC+ L+
Sbjct: 128 SMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSSPDFLL 187
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+ IH + L+ + V N+LI+MY K G D+ ++ ++VS+NA+IA +
Sbjct: 188 DGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYT 247
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ F +F M G PD ++F+ L C+ L G +LH + +
Sbjct: 248 LYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFA 307
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+ N +++++++ + A + F IE+K+L +WNT +AA + + L ++K M +
Sbjct: 308 MQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLE- 366
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G PD FTF+S++ +CA L +++ GK IH +DV +G ALVNMYAKCG ++ +
Sbjct: 367 GFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADA 426
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
K F+ + +++VVSW+ +IAA A H AL+L M GI + VT +L AC+H
Sbjct: 427 KKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHG 486
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
G + EG YF + + +GI D E+ IDLLGRAG L EAE P + L T
Sbjct: 487 GRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVT 546
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL C++ DV G+ L K++ L+P YVLL+N+YA+ G W DVA R+ ++ G+
Sbjct: 547 LLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGV 606
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
K++ S IE + +F+V + S+ + EI L+ L
Sbjct: 607 KRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERL 644
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 222/430 (51%), Gaps = 6/430 (1%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM- 94
D ++N ++ +Y KC AR+VFD + +RN SWS ++ + Q + ALE + +M
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 95 --HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSS 152
+ + Y +S ++AC + + +G+ + + + G+ V SLI ++ K G
Sbjct: 61 RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120
Query: 153 DALLVYGE-AFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
+A V+ +++S A+I +V + + + + + M QGL PD F++A L C
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180
Query: 212 SVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
S + L G +H ++ K N V N ++ +Y+K + +++ F ++ KD++SWN
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWN 240
Query: 272 TFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
IAA + + S+F M G PD +TF+SIL ACA ++ G+ +H +
Sbjct: 241 AMIAAYTLYGHDKDAFSLFHRMCT-LGHTPDIYTFSSILGACASPKRLEDGRMLHVRITA 299
Query: 332 MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
++D + N L++M+ +CG + + + F + + + +WNT++AA+A G AL L
Sbjct: 300 RGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFL 359
Query: 392 FEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLG 451
++ M G PD TF ++ +C G ++EG+ + + + G D+ T L+++
Sbjct: 360 YKNMLLEGFTPDRFTFSSVVDSCASLGALREGK-FIHECSTSCGFEKDVILGTALVNMYA 418
Query: 452 RAGKLLEAEE 461
+ G L +A++
Sbjct: 419 KCGSLADAKK 428
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 162/329 (49%), Gaps = 3/329 (0%)
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
+F+ N +I MY K DA V+ + N S++ L+ +V+N ++ EV+K M+R
Sbjct: 2 TFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVR 61
Query: 195 QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGE 254
+ + D ++ + L C+ D+ +G ++ + E + V +++ L++K + E
Sbjct: 62 KEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEE 121
Query: 255 AEKAFRLIEE-KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
AE FR + +D+IS I A + L + +M + G+ PD FT+A+IL AC
Sbjct: 122 AESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRS-QGLEPDAFTYAAILGAC 180
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
+ + GK IH H++ + ++ V NAL+ MYAKCG + S LF M ++VVSWN
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWN 240
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT 433
+IAA+ + A LF +M G PD TF +L AC +++G +
Sbjct: 241 AMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRI-TA 299
Query: 434 YGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
G D LI + R G L A Y
Sbjct: 300 RGFDRDFAMQNNLISMFTRCGSLESARRY 328
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
D + N ++ MY KC + ++F+ + RN SW+ ++ + + + AL+++++M
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 397 ATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
I D+ T +L AC V+EG E+ G D+ T LI L + G L
Sbjct: 61 RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEE-LGFEKDVVVATSLIHLFAKCGCL 119
Query: 457 LEAEEYTKKFPLGQDPIVLGTLLSA 481
EAE + +D I + ++ A
Sbjct: 120 EEAESVFRSMGAMRDIISVTAMIGA 144
>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 638
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 174/575 (30%), Positives = 319/575 (55%), Gaps = 6/575 (1%)
Query: 9 LHHCSKTKALQQGISLHAAVLK-MGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
L C + + ++ G +H + K + + D+ V + ++ +Y KCG+M A ++F+E+ + +
Sbjct: 48 LKACGELREVKYGEMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPD 107
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIH 123
+V+WS+M+SG + G A+EFF +M + P+ + +SAC + + G+ +H
Sbjct: 108 IVTWSSMVSGFEKNGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVH 167
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ ++ G+++ + NSL++ Y K +A+ ++ E +++S++ +IA +V+N
Sbjct: 168 GFVMRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAA 227
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ VF M+ G P+ + L+ C+ +NDL +G H L ++ LE+ V ++
Sbjct: 228 EALRVFNEMIDDGTEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALV 287
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y K EA F I +KD++SW I+ + + + F M ++ RPD
Sbjct: 288 DMYMKCFSPEEAYAVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDA 347
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
+L +C+ L ++ + H+++I+ + + +G +LV +Y++CG + + K+FNE
Sbjct: 348 ILMLKVLGSCSELGFLKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNE 407
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTACNHAGLVKE 422
+ ++ V W ++I + H G AL+ F M +++ +KP+ VTF+ +L+AC+HAGL+ E
Sbjct: 408 IALKDTVVWTSLITGYGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHE 467
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G F M Y ++P++EH+ L+DLLGR G+L A E TK+ P P +LGTLL AC
Sbjct: 468 GLRIFELMVNDYRLAPNLEHYAVLVDLLGRVGELDTAIEITKRMPFSPTPQILGTLLGAC 527
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
R+ ++ + E +AKQLF L+ Y+L+SN+Y G W +V R +K G+KK +
Sbjct: 528 RIHQNGEMAETVAKQLFELESNHAGYYMLMSNMYGVKGEWENVEKLRNSVKQRGIKKGLA 587
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
S+IE++ KF + H + + +LK L L
Sbjct: 588 ESLIEIRRKVHKFVADDDLHPEKEPVYGLLKELDL 622
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 216/425 (50%), Gaps = 9/425 (2%)
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
M++R L W+ ++ + + FSQM P+ + A+ AC ++ + G
Sbjct: 1 MTKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYG 60
Query: 120 QQIHAYSLK-FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+ IH + K S +VG+SLI MY+K G ++AL ++ E +P++V+++++++GF +
Sbjct: 61 EMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEK 120
Query: 179 NQQPEKGFEVFKLMLR-QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
N P + E F+ M + PDR + + C+ ++ R G +H ++ ++
Sbjct: 121 NGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLS 180
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+ N+++ Y+K EA F+++ EKD+ISW+T IA + L VF EM +D
Sbjct: 181 LVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDD- 239
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G P+ T +L ACA ++ G++ H IR L +V V ALV+MY KC +
Sbjct: 240 GTEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEA 299
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTACNH 416
Y +F+ + ++VVSW +I+ + + +++ F M +PD++ + +L +C+
Sbjct: 300 YAVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSE 359
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
G +K+ E F+S YG + L++L R G L A + + L +D +V
Sbjct: 360 LGFLKQAEC-FHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIAL-KDTVVWT 417
Query: 477 TLLSA 481
+L++
Sbjct: 418 SLITG 422
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 211/481 (43%), Gaps = 34/481 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ +L+ C+K + G +H V++ G D+ + N +LN YAK A +F M
Sbjct: 146 TLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMM 205
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+E++++SWS +I+ + Q G AL F++M PN + ACA L +G+
Sbjct: 206 AEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDGTEPNVATVLCVLQACAAANDLEQGR 265
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+ H +++ G + V +L+ MYMK +A V+ + ++VS+ ALI+GF N
Sbjct: 266 KTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPKKDVVSWVALISGFTLNG 325
Query: 181 QPEKGFEVFKLM-LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ E F +M L PD L CS L++ H +K +SNPF+G
Sbjct: 326 MAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGFLKQAECFHSYVIKYGFDSNPFIG 385
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+++ LYS+ +G A K F I KD + W + I K L F M V
Sbjct: 386 ASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGKGTKALETFNHMVRSSEV 445
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIR-MRLNQDVGVGNALVNMYAKCGLISCSY 358
+P++ TF SIL+AC+ + G +I ++ RL ++ LV++ + G + +
Sbjct: 446 KPNEVTFLSILSACSHAGLIHEGLRIFELMVNDYRLAPNLEHYAVLVDLLGRVGELDTAI 505
Query: 359 KLFNEMLHRNVVS-WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++ M T++ A H+ G A + +Q+ NHA
Sbjct: 506 EITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKQL--------------FELESNHA 551
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLL-------GRAGKLLEAEEYTKKFPLGQ 470
G Y+ M YG+ + E+ L + + G A L+E KF
Sbjct: 552 G-------YYMLMSNMYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHKFVADD 604
Query: 471 D 471
D
Sbjct: 605 D 605
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 190/576 (32%), Positives = 309/576 (53%), Gaps = 22/576 (3%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
SLL C KT AL Q + A ++ G Q + V+ +V+ + +M AR +FD +
Sbjct: 30 SLLRSC-KTVALLQKV--QAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDP 86
Query: 67 NLVSWSAMISGH-HQAGEHLLALEF--FSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
+ W+A+ G+ H A + F M + PN + F + +CA I + V+G++IH
Sbjct: 87 KVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIH 146
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+K G FV +LI +Y A ++ E N+V++ ++I+G++ +
Sbjct: 147 CEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVA 206
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG---- 239
+F L + ++ +G +EI D++ L ++ P+
Sbjct: 207 LARRLFDLAPERDVVLWNIMVSGYIEI----GDMKAARKL--------FDTMPYRDTMSW 254
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
NT++ Y+ + E+ F + E+++ SWN I +H + + L FK M D V
Sbjct: 255 NTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLV 314
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
P+D T ++L+ACA L ++ GK +H + + + VGNAL++MY+KCGLI + +
Sbjct: 315 VPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAME 374
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F M +++++WN++I A H G AL LF QMK G KPD +TFIG+L +C H GL
Sbjct: 375 VFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGL 434
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V+EG +YFNSM Y I+P IEH+ C++DL GRAG L A E+ K+ P+ D ++ LL
Sbjct: 435 VEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALL 494
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
ACR+ +++ + E ++L L+P + YVLLSN+Y G W DVA + +++D+G KK
Sbjct: 495 GACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKK 554
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P S+IEV + +F + HS+ EI +LK L
Sbjct: 555 LPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGL 590
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 170/378 (44%), Gaps = 15/378 (3%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
F S + +C + L Q++ A + G+ +V ++++ ++ + + A ++
Sbjct: 28 FISLLRSCKTVALL---QKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFP 84
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
+P + +NA+ G+ N + +F M + P+ F+F L+ C+ +G
Sbjct: 85 DPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEE 144
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
+HC +K LE N FV T++ +YS IG A K F + E+++++W + I+ C
Sbjct: 145 IHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNR 204
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
+F D D + +++ + ++ ++ L +D N
Sbjct: 205 VALARRLF-----DLAPERDVVLWNIMVSGYIEIGDMKAARK----LFDTMPYRDTMSWN 255
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG-IK 401
++N YA G + +LF EM RNV SWN +I +A++ L+ F++M G +
Sbjct: 256 TMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVV 315
Query: 402 PDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
P+ T + +L+AC G + G+ + + T G I LID+ + G + A E
Sbjct: 316 PNDATLVTVLSACARLGALDLGK-WVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAME 374
Query: 462 YTKKFPLGQDPIVLGTLL 479
+ L +D I +++
Sbjct: 375 VFESMDL-KDLITWNSMI 391
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L C++ AL G +H +G + + V N ++++Y+KCG + A +VF+ M
Sbjct: 320 TLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESM 379
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACA 111
++L++W++MI G G AL F QM + P+ F + +C
Sbjct: 380 DLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCT 430
>gi|449496714|ref|XP_004160205.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g11290-like [Cucumis sativus]
Length = 616
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 179/540 (33%), Positives = 294/540 (54%), Gaps = 6/540 (1%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C+K+ L GI +H+ ++K+G + + ++++Y KC + A KVFDEMS ++V+W
Sbjct: 78 CTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTW 137
Query: 72 SAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
+++++G+ QAG L+A+ F +M + P + + + C+ +Q G Q+HA SLK
Sbjct: 138 NSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLHAMSLK 197
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
++S VG LI MY K D+ V+ N+ ++ ++I+G+ NQ P + +
Sbjct: 198 LRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYARNQLPHEAMXL 257
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
+ ML L P+ ++ L S K +HC + ESN ++ T++ YS+
Sbjct: 258 MREMLHLNLEPNGMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESNNYIAVTLVTAYSE 317
Query: 249 F-NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFA 307
+ + K I D ISWN IA ++ E+ L F +M + D FTF
Sbjct: 318 CCGSLEDYRKVCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRREK-FDVDFFTFT 376
Query: 308 SILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR 367
SI A ++++ GKQIH + + ++ V N LV+MYA+ G I S +F+ M
Sbjct: 377 SIFKAIGMTSALEEGKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMMNEH 436
Query: 368 NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYF 427
+++SWN++++ A H G A+ LFE+M+ T IKPD+ +F+ +LTAC+H GL+ +G YF
Sbjct: 437 DLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVLTACSHVGLLDKGLEYF 496
Query: 428 NSMEKTYGI-SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRR 486
M + + P +EH+ L+DL GRAGKL EAE + + P+ + LLSAC +
Sbjct: 497 KLMRNSELVEPPKLEHYATLVDLFGRAGKLYEAEAFIESIPIEPGISIYKALLSACLIHG 556
Query: 487 DVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMI 546
+ I R AK+L L P + Y++LSN DG W D A R+++ + G+KKEP +S +
Sbjct: 557 NKDIAIRTAKKLLELYPYDPATYIMLSNALGRDGYWDDAASIRRLMSNRGVKKEPGFSWM 616
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 186/386 (48%), Gaps = 4/386 (1%)
Query: 98 PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV 157
P I IS C L G Q+H+ +K G++ ++ +L+ MY K SDA V
Sbjct: 66 PTPPILTKTISICTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDMYGKCWSISDAHKV 125
Query: 158 YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDL 217
+ E P++V++N+L+ G+++ P +F ML++G+ P FS +GGL CS
Sbjct: 126 FDEMSCPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKG 185
Query: 218 RKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC 277
G LH +++K + SN VG ++ +YSK + ++ + F ++ K++ +W + I+
Sbjct: 186 DLGSQLHAMSLKLRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGY 245
Query: 278 SHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD 337
+ + + + +EM + + P+ T+ S+L++ + KQIH +I +
Sbjct: 246 ARNQLPHEAMXLMREMLH-LNLEPNGMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESN 304
Query: 338 VGVGNALVNMYAK-CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
+ LV Y++ CG + K+ + + + +SWN +IA N +G AL+ F QM+
Sbjct: 305 NYIAVTLVTAYSECCGSLEDYRKVCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMR 364
Query: 397 ATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
D TF + A ++EG+ + KT G + ++ L+ + R+G +
Sbjct: 365 REKFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVYKT-GYTLNLSVQNGLVSMYARSGAI 423
Query: 457 LEAEEYTKKFPLGQDPIVLGTLLSAC 482
+++ D I +LLS C
Sbjct: 424 RDSKMVFSMMN-EHDLISWNSLLSGC 448
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 171/323 (52%), Gaps = 5/323 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+S L CS+ + G LHA LK+ +V+V ++++Y+KC + +R+VFD M
Sbjct: 171 SLSGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIM 230
Query: 64 SERNLVSWSAMISGHHQ---AGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
+N+ +W++MISG+ + E + + ++L PN + S +S+ + + K +
Sbjct: 231 LNKNVFTWTSMISGYARNQLPHEAMXLMREMLHLNLEPNGMTYNSLLSSFSCPRHFDKCK 290
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMK-VGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
QIH + GY S +++ +L++ Y + G D V + +S+NA+IAGF
Sbjct: 291 QIHCRIITEGYESNNYIAVTLVTAYSECCGSLEDYRKVCSNIRMSDQISWNAVIAGFTNL 350
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
E+ E F M R+ D F+F + +++ L +G +H L K N V
Sbjct: 351 GIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVYKTGYTLNLSVQ 410
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N ++++Y++ I +++ F ++ E DLISWN+ ++ C++ E+ + +F++M +
Sbjct: 411 NGLVSMYARSGAIRDSKMVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRT-CI 469
Query: 300 RPDDFTFASILAACAGLASVQHG 322
+PD+ +F ++L AC+ + + G
Sbjct: 470 KPDNTSFLAVLTACSHVGLLDKG 492
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 116/222 (52%), Gaps = 1/222 (0%)
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
+LR G P + IC+ S L G+ +H +K NP++ ++ +Y K
Sbjct: 59 LLRHGSPPTPPILTKTISICTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDMYGKCWS 118
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
I +A K F + +++WN+ + +S+F EM G+ P F+ + L
Sbjct: 119 ISDAHKVFDEMSCPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKK-GIEPTPFSLSGGLV 177
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
C+ L G Q+HA +++R + +V VG L++MY+KC + S ++F+ ML++NV +
Sbjct: 178 GCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFT 237
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
W ++I+ +A ++L A+ L +M ++P+ +T+ LL++
Sbjct: 238 WTSMISGYARNQLPHEAMXLMREMLHLNLEPNGMTYNSLLSS 279
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 83/167 (49%), Gaps = 5/167 (2%)
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
HG P ++ C + G Q+H+ +I++ + + + ALV+MY KC IS
Sbjct: 62 HGSPPTPPILTKTISICTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDMYGKCWSISD 121
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
++K+F+EM +VV+WN+++ + A+ LF +M GI+P + G L C+
Sbjct: 122 AHKVFDEMSCPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQ 181
Query: 417 AGLVKEGE--AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+++G+ + ++M S ++ T LID+ + L ++
Sbjct: 182 ---LQKGDLGSQLHAMSLKLRFSSNVVVGTGLIDMYSKCCNLQDSRR 225
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 188/634 (29%), Positives = 329/634 (51%), Gaps = 62/634 (9%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ +L C + + + G + H + G + +V + N ++ +Y++CG + A +FDE+
Sbjct: 12 TLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEI 71
Query: 64 SER---NLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNE---------YIFASAISACA 111
++R +++SW++++S H ++ AL+ FS+M L+ +E + + AC
Sbjct: 72 TQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACG 131
Query: 112 GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNA 171
++++ + +++H +++ G FVGN+LI Y K G +A+ V+ ++VS+NA
Sbjct: 132 SLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNA 191
Query: 172 LIAGFVENQQPEKGFEVFKLMLRQ-----------------------------------G 196
++AG+ ++ + FE+FK M ++ G
Sbjct: 192 MVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSG 251
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK-CKLE-SNPFVG--------NTIMALY 246
LP+ + L C+ +GM +H ++K C L N F G N ++ +Y
Sbjct: 252 SLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMY 311
Query: 247 SKFNLIGEAEKAFRLI--EEKDLISWNTFIAACSHCADYEKGLSVFKEM-SNDHGVRPDD 303
SK A F I EE+++++W I + D L +F EM S +GV P+
Sbjct: 312 SKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNA 371
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG--VGNALVNMYAKCGLISCSYKLF 361
+T + IL ACA LA+++ GKQIHA+++R V N L+NMY+KCG + + +F
Sbjct: 372 YTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVF 431
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ M ++ +SW +++ + H G AL +F++M+ G PD +TF+ +L AC+H G+V
Sbjct: 432 DSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVD 491
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+G +YF+SM YG++P EH+ IDLL R G+L +A + K P+ +V LLSA
Sbjct: 492 QGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSA 551
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
CR+ +V + E +L + Y L+SN+YA+ G W DVA R ++K SG+KK P
Sbjct: 552 CRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRP 611
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S ++ Q F V + SH +I +L++L
Sbjct: 612 GCSWVQGQKGTASFFVGDRSHPLSPQIYALLESL 645
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 174/383 (45%), Gaps = 57/383 (14%)
Query: 99 NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY 158
+ + + AC + S G H G+ S F+ N+L++MY + G +A +++
Sbjct: 9 DHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIF 68
Query: 159 GEAFE---PNLVSFNALIAGFVENQQPEKGFEVF-KLMLRQGLLP-----DRFSFAGGLE 209
E + +++S+N++++ V++ ++F K+ L P D S L
Sbjct: 69 DEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILP 128
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
C + + +H ++ + FVGN ++ Y+K L+ A K F ++E KD++S
Sbjct: 129 ACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVS 188
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDH-------------------------------- 297
WN +A S +++ +FK M ++
Sbjct: 189 WNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMI 248
Query: 298 --GVRPDDFTFASILAACAGLASVQHGKQIHAHLIR---MRLNQDVG-------VGNALV 345
G P+ T S+L+ACA L + G +IHA+ ++ + L+ D G V NAL+
Sbjct: 249 FSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALI 308
Query: 346 NMYAKCGLISCSYKLFNE--MLHRNVVSWNTIIAAHANHRLGGSALKLFEQM--KATGIK 401
+MY+KC + +F++ + RNVV+W +I HA + ALKLF +M + G+
Sbjct: 309 DMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVA 368
Query: 402 PDSVTFIGLLTACNHAGLVKEGE 424
P++ T +L AC H ++ G+
Sbjct: 369 PNAYTISCILMACAHLAAIRIGK 391
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 124/247 (50%), Gaps = 8/247 (3%)
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
MLR G D F+ L+ C R G H L ESN F+ N ++A+YS+
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 252 IGEAEKAFRLIEEK---DLISWNTFIAACSHCADYEKGLSVFKEMS-----NDHGVRPDD 303
+ EA F I ++ D+ISWN+ ++A ++ L +F +M+ R D
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
+ +IL AC L +V K++H + IR DV VGNAL++ YAKCGL+ + K+FN
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M ++VVSWN ++A ++ +A +LF+ M+ I D VT+ ++ + G E
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240
Query: 424 EAYFNSM 430
F M
Sbjct: 241 LNVFRQM 247
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 69/116 (59%), Gaps = 7/116 (6%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPD---VIVSNHVLNLYAKCGKMILARK 58
A +IS +L C+ A++ G +HA VL+ Q D V+N ++N+Y+KCG + AR
Sbjct: 371 AYTISCILMACAHLAAIRIGKQIHAYVLRHH-QYDSSAYFVANCLINMYSKCGDVDTARH 429
Query: 59 VFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
VFD MS+++ +SW++M++G+ G AL+ F +M +P++ F + AC+
Sbjct: 430 VFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACS 485
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/490 (35%), Positives = 279/490 (56%), Gaps = 2/490 (0%)
Query: 88 LEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMK 147
L+ L ++ S I+ACA +SL + IHA+ +A F+ NSLI +Y K
Sbjct: 52 LDSVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCK 111
Query: 148 VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGG 207
G +DA V+ ++ S+ +LIAG+ +N P++ + MLR P+ F+FA
Sbjct: 112 CGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASL 171
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDL 267
L+ S G +H LTVK + +VG+ ++ +Y++ + A F +E K+
Sbjct: 172 LKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNG 231
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHA 327
+SWN IA + D E L +F EM + G FT++S+ +A AG+ +++ GK +HA
Sbjct: 232 VSWNALIAGFARKGDGETTLLMFAEMQRN-GFEATHFTYSSVFSAIAGIGALEQGKWVHA 290
Query: 328 HLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGS 387
H+I+ VGN +++MYAK G + + K+F+ + ++VV+WN+++ A A + LG
Sbjct: 291 HMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGRE 350
Query: 388 ALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLI 447
A+ FE+M+ G+ + +TF+ +LTAC+H GLVKEG+ YF+ M K Y + P+I+H+ ++
Sbjct: 351 AVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMM-KEYNLEPEIDHYVTVV 409
Query: 448 DLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTS 507
DLLGRAG L +A + K P+ V G LL +CR+ ++ IG+ A +F L P T
Sbjct: 410 DLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTG 469
Query: 508 PYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGE 567
P VLL N+YAS G W A RKM+K +G+KKEP+ S +E++ + F + +H + E
Sbjct: 470 PPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEE 529
Query: 568 INYMLKTLSL 577
I + +S+
Sbjct: 530 IYKKWEEISI 539
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 194/386 (50%), Gaps = 8/386 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
SL+ C++ ++L ++HA + V + N +++LY KCG + AR+VFD M R
Sbjct: 69 SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
++ SW+++I+G+ Q AL M PN + FAS + A S G+QIH
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH 188
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A ++K+ + +VG++L+ MY + G A+ V+ + N VS+NALIAGF E
Sbjct: 189 ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGE 248
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+F M R G F+++ + L +G +H +K + FVGNTI+
Sbjct: 249 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTIL 308
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K + +A K F +++KD+++WN+ + A + + ++ F+EM GV +
Sbjct: 309 DMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRK-CGVHLNQ 367
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK-LFN 362
TF SIL AC+ V+ GKQ + L ++ +V++ + GL++ + +F
Sbjct: 368 ITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFK 427
Query: 363 EMLHRNVVSWNTIIAA---HANHRLG 385
+ W ++ + H N ++G
Sbjct: 428 MPMKPTAAVWGALLGSCRMHKNAKIG 453
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 153/306 (50%), Gaps = 11/306 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +SLL + + G +HA +K DV V + +L++YA+CG+M +A VFD++
Sbjct: 167 TFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQL 226
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+N VSW+A+I+G + G+ L F++M + ++S SA AGI +L +G+
Sbjct: 227 ESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGK 286
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+HA+ +K G +FVGN+++ MY K G DA V+ + ++V++N+++ F +
Sbjct: 287 WVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYG 346
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ F+ M + G+ ++ +F L CS +++G + + LE
Sbjct: 347 LGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYV 406
Query: 241 TIMALYSKFNLIGEAEK-AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH-- 297
T++ L + L+ +A F++ + W + +C + + G + + DH
Sbjct: 407 TVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIG-----QFAADHVF 461
Query: 298 GVRPDD 303
+ PDD
Sbjct: 462 ELDPDD 467
>gi|357116286|ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 692
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 177/542 (32%), Positives = 300/542 (55%), Gaps = 8/542 (1%)
Query: 12 CSKTKALQQGI----SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
C+ ++QG ++ A V++ + P V V +++++AKCG + AR VF+ M ER+
Sbjct: 152 CAALGVVEQGRMVRENVEADVVRGVVAPSVFVQCALVDMFAKCGCLGEARSVFESMLERD 211
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
L +W+AMI G AG+ L A+ FS+M L + I A+ I AC + L G +H
Sbjct: 212 LAAWTAMIGGAVHAGDWLDAMSLFSRMRSEGFLADSVIIATVIPACGRAKELRTGMVLHG 271
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+++ G + V N+L+ MY K G A V+ ++VS++ LIAG+ +N +
Sbjct: 272 CAVRCGVGDDTCVSNALVDMYCKCGCLGMADRVFWSIGFKDVVSWSTLIAGYSQNGKDHV 331
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
+F M+ GL P+ + A L S R G +H +++ + + F+G+ +
Sbjct: 332 SVNLFTEMVTAGLKPNSNTMASILPSLSEMKLFRHGKEIHGFSLRNGFDQSKFLGSAFID 391
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
YS+ I EAE L+ ++DL+ WN+ +A + + + L F+ + G RPD
Sbjct: 392 FYSRQGSIREAEIVLELMPKRDLVIWNSMVAGYAVNGNTDSALCAFRALQKV-GFRPDHV 450
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T S+L C + + GK++HA+++R ++ V NAL++MY KC + ++F +
Sbjct: 451 TVVSVLPVCNHHSRLIQGKELHAYVVRHYMSSVCSVSNALIDMYCKCCCLEKGKEIFQLV 510
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
R+ ++NT+I++ H A+ LF+ MK GI PD VTF+ LL++C+HAGL+++G
Sbjct: 511 TDRDTATYNTLISSFGKHGHEDEAIMLFDLMKRDGIAPDKVTFVALLSSCSHAGLIEKGL 570
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRL 484
+++ M + Y ISP EH++C++DL R+GKL +A ++ + VLG LL ACR+
Sbjct: 571 HFYDIMLQDYNISPGKEHYSCVVDLYSRSGKLDDAWKFVSSLQDEAEIDVLGCLLGACRV 630
Query: 485 RRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYS 544
+ I E +AK++F P+ ++LLSN+YA+ GMW V R M+++ LK + S
Sbjct: 631 HNRMDIAELVAKRIFEQNPSDPGYHILLSNIYANAGMWSHVTRIRTMIENRSLKNKTGNS 690
Query: 545 MI 546
+I
Sbjct: 691 LI 692
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 135/490 (27%), Positives = 239/490 (48%), Gaps = 12/490 (2%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGI-QPDVIVSNHVLNLYAKCGKMILARKV 59
++ S +SLL L + LHAA+L G + +++ +++ YA+ G+ A V
Sbjct: 38 VSASHASLLLRLRSCPTLAEARRLHAALLVGGHHRRGAVLAAQLVHAYARLGEAGRALSV 97
Query: 60 FDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQS 115
D M RN +W+A I G +G+ ALE + M + + + + I ACA +
Sbjct: 98 LDGMPMRNSFAWNAAIKGLVDSGQFAEALETYWAMVRDGSVAADGFTYPPVIKACAALGV 157
Query: 116 LVKG----QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNA 171
+ +G + + A ++ A FV +L+ M+ K G +A V+ E +L ++ A
Sbjct: 158 VEQGRMVRENVEADVVRGVVAPSVFVQCALVDMFAKCGCLGEARSVFESMLERDLAAWTA 217
Query: 172 LIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK 231
+I G V +F M +G L D A + C + +LR GM+LH V+C
Sbjct: 218 MIGGAVHAGDWLDAMSLFSRMRSEGFLADSVIIATVIPACGRAKELRTGMVLHGCAVRCG 277
Query: 232 LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK 291
+ + V N ++ +Y K +G A++ F I KD++SW+T IA S +++F
Sbjct: 278 VGDDTCVSNALVDMYCKCGCLGMADRVFWSIGFKDVVSWSTLIAGYSQNGKDHVSVNLFT 337
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
EM G++P+ T ASIL + + + +HGK+IH +R +Q +G+A ++ Y++
Sbjct: 338 EMVT-AGLKPNSNTMASILPSLSEMKLFRHGKEIHGFSLRNGFDQSKFLGSAFIDFYSRQ 396
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
G I + + M R++V WN+++A +A + SAL F ++ G +PD VT + +L
Sbjct: 397 GSIREAEIVLELMPKRDLVIWNSMVAGYAVNGNTDSALCAFRALQKVGFRPDHVTVVSVL 456
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQD 471
CNH + +G+ + + Y +S LID+ + L + +E + +D
Sbjct: 457 PVCNHHSRLIQGKELHAYVVRHY-MSSVCSVSNALIDMYCKCCCLEKGKEIF-QLVTDRD 514
Query: 472 PIVLGTLLSA 481
TL+S+
Sbjct: 515 TATYNTLISS 524
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 202/367 (55%), Gaps = 11/367 (2%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
I++++ C + K L+ G+ LH ++ G+ D VSN ++++Y KCG + +A +VF +
Sbjct: 250 IATVIPACGRAKELRTGMVLHGCAVRCGVGDDTCVSNALVDMYCKCGCLGMADRVFWSIG 309
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
+++VSWS +I+G+ Q G+ +++ F++M L PN AS + + + ++ G++
Sbjct: 310 FKDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSLSEMKLFRHGKE 369
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
IH +SL+ G+ F+G++ I Y + G +A +V + +LV +N+++AG+ N
Sbjct: 370 IHGFSLRNGFDQSKFLGSAFIDFYSRQGSIREAEIVLELMPKRDLVIWNSMVAGYAVNGN 429
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ F+ + + G PD + L +C+ + L +G LH V+ + S V N
Sbjct: 430 TDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRHYMSSVCSVSNA 489
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y K + + ++ F+L+ ++D ++NT I++ ++ + +F M D G+ P
Sbjct: 490 LIDMYCKCCCLEKGKEIFQLVTDRDTATYNTLISSFGKHGHEDEAIMLFDLMKRD-GIAP 548
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG----NALVNMYAKCGLISCS 357
D TF ++L++C+ ++ G +H + I ++ + ++ G + +V++Y++ G + +
Sbjct: 549 DKVTFVALLSSCSHAGLIEKG--LHFYDIMLQ-DYNISPGKEHYSCVVDLYSRSGKLDDA 605
Query: 358 YKLFNEM 364
+K + +
Sbjct: 606 WKFVSSL 612
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+L C+ L QG LHA V++ + VSN ++++Y KC + +++F +
Sbjct: 451 TVVSVLPVCNHHSRLIQGKELHAYVVRHYMSSVCSVSNALIDMYCKCCCLEKGKEIFQLV 510
Query: 64 SERNLVSWSAMISG---HHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
++R+ +++ +IS H E ++ + + + P++ F + +S+C+ + KG
Sbjct: 511 TDRDTATYNTLISSFGKHGHEDEAIMLFDLMKRDGIAPDKVTFVALLSSCSHAGLIEKG- 569
Query: 121 QIHAYSLKFGYASISFVG---NSLISMYMKVGYSSDA 154
+H Y + +IS + ++ +Y + G DA
Sbjct: 570 -LHFYDIMLQDYNISPGKEHYSCVVDLYSRSGKLDDA 605
>gi|449450916|ref|XP_004143208.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 616
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 179/540 (33%), Positives = 294/540 (54%), Gaps = 6/540 (1%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C+K+ L GI +H+ ++K+G + + ++++Y KC + A KVFDEMS ++V+W
Sbjct: 78 CTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTW 137
Query: 72 SAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
+++++G+ QAG L+A+ F +M + P + + + C+ +Q G Q+HA SLK
Sbjct: 138 NSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLHAMSLK 197
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
++S VG LI MY K D+ V+ N+ ++ ++I+G+ NQ P + +
Sbjct: 198 LRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYARNQLPHEAMIL 257
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
+ ML L P+ ++ L S K +HC + ESN ++ T++ YS+
Sbjct: 258 MREMLHLNLKPNGMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESNNYIAVTLVTAYSE 317
Query: 249 F-NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFA 307
+ + K I D ISWN IA ++ E+ L F +M + D FTF
Sbjct: 318 CCGSLEDYRKVCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRREK-FDVDFFTFT 376
Query: 308 SILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR 367
SI A ++++ GKQIH + + ++ V N LV+MYA+ G I S +F+ M
Sbjct: 377 SIFKAIGMTSALEEGKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMMNEH 436
Query: 368 NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYF 427
+++SWN++++ A H G A+ LFE+M+ T IKPD+ +F+ +LTAC+H GL+ +G YF
Sbjct: 437 DLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVLTACSHVGLLDKGLEYF 496
Query: 428 NSMEKTYGI-SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRR 486
M + + P +EH+ L+DL GRAGKL EAE + + P+ + LLSAC +
Sbjct: 497 KLMRNSELVEPPKLEHYATLVDLFGRAGKLYEAEAFIESIPIEPGISIYKALLSACLIHG 556
Query: 487 DVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMI 546
+ I R AK+L L P + Y++LSN DG W D A R+++ + G+KKEP +S +
Sbjct: 557 NKDIAIRTAKKLLELYPYDPATYIMLSNALGRDGYWDDAASIRRLMSNRGVKKEPGFSWM 616
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 188/386 (48%), Gaps = 4/386 (1%)
Query: 98 PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV 157
P I IS C L G Q+H+ +K G++ ++ +L+ MY K SDA V
Sbjct: 66 PTPPILTKTISICTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDMYGKCWSISDAHKV 125
Query: 158 YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDL 217
+ E P++V++N+L+ G+++ P +F ML++G+ P FS +GGL CS
Sbjct: 126 FDEMSCPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKG 185
Query: 218 RKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC 277
G LH +++K + SN VG ++ +YSK + ++ + F ++ K++ +W + I+
Sbjct: 186 DLGSQLHAMSLKLRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGY 245
Query: 278 SHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD 337
+ + + + +EM + + ++P+ T+ S+L++ + KQIH +I +
Sbjct: 246 ARNQLPHEAMILMREMLHLN-LKPNGMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESN 304
Query: 338 VGVGNALVNMYAK-CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
+ LV Y++ CG + K+ + + + +SWN +IA N +G AL+ F QM+
Sbjct: 305 NYIAVTLVTAYSECCGSLEDYRKVCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMR 364
Query: 397 ATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
D TF + A ++EG+ + KT G + ++ L+ + R+G +
Sbjct: 365 REKFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVYKT-GYTLNLSVQNGLVSMYARSGAI 423
Query: 457 LEAEEYTKKFPLGQDPIVLGTLLSAC 482
+++ D I +LLS C
Sbjct: 424 RDSKMVFSMMN-EHDLISWNSLLSGC 448
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 172/323 (53%), Gaps = 5/323 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+S L CS+ + G LHA LK+ +V+V ++++Y+KC + +R+VFD M
Sbjct: 171 SLSGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIM 230
Query: 64 SERNLVSWSAMISGHHQ---AGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
+N+ +W++MISG+ + E ++ + ++L PN + S +S+ + + K +
Sbjct: 231 LNKNVFTWTSMISGYARNQLPHEAMILMREMLHLNLKPNGMTYNSLLSSFSCPRHFDKCK 290
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMK-VGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
QIH + GY S +++ +L++ Y + G D V + +S+NA+IAGF
Sbjct: 291 QIHCRIITEGYESNNYIAVTLVTAYSECCGSLEDYRKVCSNIRMSDQISWNAVIAGFTNL 350
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
E+ E F M R+ D F+F + +++ L +G +H L K N V
Sbjct: 351 GIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVYKTGYTLNLSVQ 410
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N ++++Y++ I +++ F ++ E DLISWN+ ++ C++ E+ + +F++M +
Sbjct: 411 NGLVSMYARSGAIRDSKMVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRT-CI 469
Query: 300 RPDDFTFASILAACAGLASVQHG 322
+PD+ +F ++L AC+ + + G
Sbjct: 470 KPDNTSFLAVLTACSHVGLLDKG 492
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 116/222 (52%), Gaps = 1/222 (0%)
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
+LR G P + IC+ S L G+ +H +K NP++ ++ +Y K
Sbjct: 59 LLRHGSPPTPPILTKTISICTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDMYGKCWS 118
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
I +A K F + +++WN+ + +S+F EM G+ P F+ + L
Sbjct: 119 ISDAHKVFDEMSCPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKK-GIEPTPFSLSGGLV 177
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
C+ L G Q+HA +++R + +V VG L++MY+KC + S ++F+ ML++NV +
Sbjct: 178 GCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFT 237
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
W ++I+ +A ++L A+ L +M +KP+ +T+ LL++
Sbjct: 238 WTSMISGYARNQLPHEAMILMREMLHLNLKPNGMTYNSLLSS 279
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 83/167 (49%), Gaps = 5/167 (2%)
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
HG P ++ C + G Q+H+ +I++ + + + ALV+MY KC IS
Sbjct: 62 HGSPPTPPILTKTISICTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDMYGKCWSISD 121
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
++K+F+EM +VV+WN+++ + A+ LF +M GI+P + G L C+
Sbjct: 122 AHKVFDEMSCPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQ 181
Query: 417 AGLVKEGE--AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+++G+ + ++M S ++ T LID+ + L ++
Sbjct: 182 ---LQKGDLGSQLHAMSLKLRFSSNVVVGTGLIDMYSKCCNLQDSRR 225
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 181/566 (31%), Positives = 307/566 (54%), Gaps = 8/566 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+SL+ + + + L Q +H ++ G+Q + + ++N + G++ ARK+FDE
Sbjct: 60 ASLIDNSTHKRHLDQ---IHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCY 116
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQI 122
++ W+A+I + + + +E + M P+ + F + AC + I
Sbjct: 117 PDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCII 176
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H +K+G+ S FV N L+++Y K G+ A +V+ + +VS+ ++I+G+ +N +
Sbjct: 177 HGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKA 236
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
+ +F M G+ PD + L + +DL +G +H +K LE P + ++
Sbjct: 237 VEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISL 296
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
A Y+K L+ A+ F ++ ++I WN I+ + E+ +++F M + ++PD
Sbjct: 297 TAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMIS-RNIKPD 355
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
T S + A A + S++ + + ++ + D+ V +L++MYAKCG + + ++F+
Sbjct: 356 SVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFD 415
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
++VV W+ +I + H G A+ L+ MK G+ P+ VTFIGLLTACNH+GLVKE
Sbjct: 416 RNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKE 475
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G F+ M K + I P EH++C++DLLGRAG L EA + K P+ V G LLSAC
Sbjct: 476 GWELFHCM-KDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSAC 534
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
++ R V +GE A +LF L P T YV LSNLYAS +W VA R ++++ GL K+
Sbjct: 535 KIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLG 594
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEI 568
YS+IE+ G + F V + SH EI
Sbjct: 595 YSVIEINGKLQAFHVGDKSHPMAKEI 620
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 143/280 (51%), Gaps = 8/280 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+L + L+QG S+H V+KMG++ + + + YAKCG + +A+ FD+M
Sbjct: 257 ALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQM 316
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
N++ W+AMISG+ + G A+ F M ++ P+ SA+ A A + SL Q
Sbjct: 317 KTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQ 376
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+ Y K Y S FV SLI MY K G A V+ + ++V ++A+I G+ +
Sbjct: 377 WMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHG 436
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVG 239
Q + ++ +M + G+ P+ +F G L C+ S +++G + HC+ + N
Sbjct: 437 QGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKDFEIVPRNEHY- 495
Query: 240 NTIMALYSKFNLIGEAEKAF--RLIEEKDLISWNTFIAAC 277
+ ++ L + +GEA AF ++ E + W ++AC
Sbjct: 496 SCVVDLLGRAGYLGEA-CAFIMKIPIEPGVSVWGALLSAC 534
>gi|297818116|ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322779|gb|EFH53200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 652
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 190/581 (32%), Positives = 312/581 (53%), Gaps = 9/581 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S S LL + K G +H V+K G + +V V + ++++YAKC ++ A F E+
Sbjct: 49 SFSRLLKGIASAKRFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEI 108
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP----NEYIFASAISACAGIQSLVKG 119
E N VSW+A+I+G Q + A M + ++ FA ++
Sbjct: 109 LEPNSVSWNALIAGFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLL 168
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY-GEAFEPNLVSFNALIAGFVE 178
+Q+HA LK G + N++IS Y G SDA V+ G +L+S+N++IAG +
Sbjct: 169 KQVHAKVLKLGLEHEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSK 228
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
++Q E FE+F M R + D +++ G + CS G LH L +K LE V
Sbjct: 229 HEQKESAFELFTEMHRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSV 288
Query: 239 GNTIMALYSKF--NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
N ++++Y +F ++ +A F ++ KDL+SWN+ + S E + F+ + +
Sbjct: 289 SNALISMYIQFPTGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSS 348
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
+ + DD+ F+++L +C+ LA++Q G+Q HA + + V ++L+ MY+KCG+I
Sbjct: 349 N-IEVDDYAFSAVLRSCSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIEN 407
Query: 357 SYKLFNEMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ K F ++ + N ++WN +I +A H G +L LF QM +K D VTF +LTAC+
Sbjct: 408 ARKCFEQISSKHNTIAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACS 467
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
H GL++EG NSME Y I P +EH+ +DLLGRAG + + +E + PL DP+VL
Sbjct: 468 HTGLIQEGLELLNSMEPVYKIQPRMEHYAAAVDLLGRAGLVNKVKELIESMPLNPDPMVL 527
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
T L CR ++ + ++A L ++P YV LS++Y+ W + A +KM+K+
Sbjct: 528 KTFLGVCRACGEIEMATQVANHLLEIEPEDHFAYVSLSHMYSDLKKWEEKANVKKMMKER 587
Query: 536 GLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
G+KK P +S IE++ F + SHS EI M++ L+
Sbjct: 588 GVKKVPGWSWIEIRNQVNAFNAEDRSHSLSKEIYLMIEDLT 628
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 197/377 (52%), Gaps = 14/377 (3%)
Query: 58 KVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQ 114
++FDEM +R+ VSW+ MISG+ G+ + F+ M + Y F+ + A +
Sbjct: 2 RLFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAK 61
Query: 115 SLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIA 174
G+Q+H +K GY +VG+SL+ MY K DA + E EPN VS+NALIA
Sbjct: 62 RFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALIA 121
Query: 175 GFVENQQPEKGFEVFKLM-LRQGLLPDRFSFAGGLEICS---VSNDLRKGMILHCLTVKC 230
GFV+ + + F + LM ++ + D +FA L + N L++ +H +K
Sbjct: 122 GFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQ---VHAKVLKL 178
Query: 231 KLESNPFVGNTIMALYSKFNLIGEAEKAFR-LIEEKDLISWNTFIAACSHCADYEKGLSV 289
LE + N +++ Y+ L+ +A++ F L KDLISWN+ IA S E +
Sbjct: 179 GLEHEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFEL 238
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
F EM + + D +T+ I++AC+G GK +H +I+ L Q V NAL++MY
Sbjct: 239 FTEMHRNW-IETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYI 297
Query: 350 K--CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTF 407
+ G++ + LF + +++VSWN+I+ + + L A+K F ++++ I+ D F
Sbjct: 298 QFPTGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAF 357
Query: 408 IGLLTACNHAGLVKEGE 424
+L +C+ ++ G+
Sbjct: 358 SAVLRSCSDLATLQLGQ 374
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 177/550 (32%), Positives = 309/550 (56%), Gaps = 10/550 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S L C++ + L G +H ++K+ +V+++ +L++YAKCG++ + KVF++++
Sbjct: 158 SKALKACTEVQDLDNGKKIHCQIVKVPSFDNVVLTG-LLDMYAKCGEIKSSYKVFEDITL 216
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
RN+V W++MI+G+ + + L F++M +L NEY + + + AC +++L +G+
Sbjct: 217 RNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWF 276
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H +K G S + SL+ MY+K G S+A V+ E +LV + A+I G+ N
Sbjct: 277 HGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSV 336
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL-ESNPFVGNT 241
+ +F+ M G+ P+ + A L C + +L G +H L++K + ++N V N
Sbjct: 337 NEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIWDTN--VANA 394
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y+K +A+ F + EKD+++WN+ I+ S + L +F M N V P
Sbjct: 395 LVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM-NTESVMP 453
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRL--NQDVGVGNALVNMYAKCGLISCSYK 359
+ T AS+ +ACA L S+ G +HA+ +++ + V VG AL++ YAKCG +
Sbjct: 454 NGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARL 513
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F+ + +N ++W+ +I + +L+LFE+M KP+ TF +L+AC+H G+
Sbjct: 514 IFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGM 573
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V EG+ YF+SM K Y +P +H+TC++D+L RAG+L +A + +K P+ D G L
Sbjct: 574 VNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFL 633
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
C + +GE + K++ L P S YVL+SNLYASDG W R ++K GL K
Sbjct: 634 HGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWSQAKEVRNLMKQRGLSK 693
Query: 540 EPSYSMIEVQ 549
+S++E +
Sbjct: 694 IAGHSIMESE 703
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 222/452 (49%), Gaps = 12/452 (2%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C+ +L+Q H + G+ D+ ++ +++LY G AR VFD++ E +
Sbjct: 62 LLSKCTNIDSLRQA---HGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPD 118
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
W ++ + E ++F+ + ++ +F+ A+ AC +Q L G++IH
Sbjct: 119 FYLWKVILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHC 178
Query: 125 YSLKF-GYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+K + ++ G L+ MY K G + V+ + N+V + ++IAG+V+N E
Sbjct: 179 QIVKVPSFDNVVLTG--LLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYE 236
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+G +F M +L + +++ + C+ L +G H +K +E + + +++
Sbjct: 237 EGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLL 296
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y K I A + F DL+ W I +H + LS+F++MS G++P+
Sbjct: 297 DMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSG-VGIKPNC 355
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T AS+L+ C + +++ G+ IH I++ + D V NALV+MYAKC + +F
Sbjct: 356 VTIASVLSGCGLVGNLELGRSIHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEM 414
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
+++V+WN+II+ + + AL LF +M + P+ VT L +AC G + G
Sbjct: 415 ESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIG 474
Query: 424 EA-YFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
+ + S++ + S + T L+D + G
Sbjct: 475 SSLHAYSVKLGFLASSSVHVGTALLDFYAKCG 506
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 163/314 (51%), Gaps = 19/314 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I+S+L C L+ G S+H +K+GI D V+N ++++YAKC + A+ VF+
Sbjct: 357 TIASVLSGCGLVGNLELGRSIHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEME 415
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
SE+++V+W+++ISG Q G AL F +M+ ++PN AS SACA + SL G
Sbjct: 416 SEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGS 475
Query: 121 QIHAYSLKFGY--ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+HAYS+K G+ +S VG +L+ Y K G + A L++ E N ++++A+I G+ +
Sbjct: 476 SLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGK 535
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ E+F+ ML++ P+ +F L CS + + +G K F
Sbjct: 536 QGDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFSSMYK----DYNFT 591
Query: 239 GNT--IMALYSKFNLIGEAEKAFRLIE----EKDLISWNTFIAACSHCADYEKGLSVFKE 292
+T + GE E+A +IE + D+ + F+ C + ++ G V K+
Sbjct: 592 PSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKK 651
Query: 293 MSNDHGVRPDDFTF 306
M + H PDD ++
Sbjct: 652 MLDLH---PDDASY 662
>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 803
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 187/565 (33%), Positives = 310/565 (54%), Gaps = 10/565 (1%)
Query: 17 ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMIS 76
+L++G +HA V+K+ DV V N +++LY K G A KVF+EM ER++VSW++MIS
Sbjct: 141 SLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIVSWNSMIS 200
Query: 77 GHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYAS 133
G+ + +L F +M P+ + SA+ AC+ + S G+++H ++++ +
Sbjct: 201 GYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHCHAVRSRIET 260
Query: 134 IS-FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM 192
V S++ MY K G S A ++ + N+V++N LI + N + F F+ M
Sbjct: 261 GDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCFQKM 320
Query: 193 LRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
Q GL PD + L C++ +G +H ++ + + ++ +Y ++
Sbjct: 321 SEQNGLQPDVITLINLLPACAI----LEGRTIHGYAMRRGFLPHIVLDTALIDMYGEWGQ 376
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ AE F I EK+LISWN+ IAA L +F+++ D + PD T ASIL
Sbjct: 377 LKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLW-DSSLLPDSTTIASILP 435
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
A A S+ G+QIHA++++ R + + N+LV+MYA CG + + K FN +L ++VVS
Sbjct: 436 AYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVS 495
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
WN+II A+A H G ++ LF +M A+ + P+ TF LL AC+ +G+V EG YF SM+
Sbjct: 496 WNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEYFESMK 555
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
+ YGI P IEH+ ++DL+GR G A+ + ++ P + G+LL+A R D+ +
Sbjct: 556 REYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFLPTARIWGSLLNASRNHNDITVA 615
Query: 492 ERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGT 551
E A+Q+F ++ T YVLL N+YA W DV + +++ G+ + S S +E +
Sbjct: 616 EFAAEQIFKMEHDNTGCYVLLLNMYAEARRWEDVNRIKLLMESKGISRTSSRSTVEAKSK 675
Query: 552 FEKFTVAEFSHSKIGEINYMLKTLS 576
T + SH + +I +L +S
Sbjct: 676 THVLTNGDRSHVETNKIYEVLDIVS 700
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 121/382 (31%), Positives = 214/382 (56%), Gaps = 8/382 (2%)
Query: 47 YAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIF 103
+A G M A ++FDEM++ + W+ MI G G + AL+ + +M + + + +
Sbjct: 70 FADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTY 129
Query: 104 ASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE 163
I + GI SL +G++IHA +K + S +V NSLIS+YMK+G S DA V+ E E
Sbjct: 130 PFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPE 189
Query: 164 PNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMIL 223
++VS+N++I+G++ + + +FK ML+ G PDRFS L CS G L
Sbjct: 190 RDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKEL 249
Query: 224 HCLTVKCKLES-NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
HC V+ ++E+ + V +I+ +YSK+ + AE+ F+ I ++++++WN I + +
Sbjct: 250 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSR 309
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
F++MS +G++PD T ++L ACA + G+ IH + +R + +
Sbjct: 310 VTDAFLCFQKMSEQNGLQPDVITLINLLPACA----ILEGRTIHGYAMRRGFLPHIVLDT 365
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
AL++MY + G + + +F+ + +N++SWN+IIAA+ + SAL+LF+++ + + P
Sbjct: 366 ALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLP 425
Query: 403 DSVTFIGLLTACNHAGLVKEGE 424
DS T +L A + + EG
Sbjct: 426 DSTTIASILPAYAESLSLSEGR 447
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 131/265 (49%), Gaps = 3/265 (1%)
Query: 251 LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
L+ +A + F + + D WN I + C Y + L ++ M GV+ D FT+ ++
Sbjct: 75 LMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFS-GVKADSFTYPFVI 133
Query: 311 AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVV 370
+ G++S++ GK+IHA +I++R DV V N+L+++Y K G + K+F EM R++V
Sbjct: 134 KSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIV 193
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSM 430
SWN++I+ + G +L LF++M G KPD + + L AC+H G+
Sbjct: 194 SWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHCHA 253
Query: 431 EKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVI 490
++ + D+ T ++D+ + G++ AE K + Q IV +L C R V
Sbjct: 254 VRSRIETGDVMVMTSILDMYSKYGEVSYAERIFK--CIIQRNIVAWNVLIGCYARNSRVT 311
Query: 491 GERLAKQLFHLQPTTTSPYVLLSNL 515
L Q Q + L NL
Sbjct: 312 DAFLCFQKMSEQNGLQPDVITLINL 336
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ +I+S+L +++ +L +G +HA ++K + I+ N ++++YA CG + ARK F+
Sbjct: 427 STTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFN 486
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
+ +++VSW+++I + G +++ FS+M + PN+ FAS ++AC+
Sbjct: 487 HVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACS 539
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 172/490 (35%), Positives = 279/490 (56%), Gaps = 2/490 (0%)
Query: 88 LEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMK 147
L+ L ++ S I+ACA +SL + IHA+ +A F+ NSLI +Y K
Sbjct: 52 LDSVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCK 111
Query: 148 VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGG 207
G +DA V+ ++ S+ +LIAG+ +N P++ + MLR P+ F+FA
Sbjct: 112 CGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASL 171
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDL 267
L+ S G +H LTVK + +VG+ ++ +Y++ + A F +E K+
Sbjct: 172 LKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNG 231
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHA 327
+SWN IA + D E L +F EM + G FT++S+ +A AG+ +++ GK +HA
Sbjct: 232 VSWNALIAGFARKGDGETTLLMFAEMQRN-GFEATHFTYSSVFSAIAGIGALEQGKWVHA 290
Query: 328 HLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGS 387
H+I+ VGN +++MYAK G + + K+F+ + ++VV+WN+++ A A + LG
Sbjct: 291 HMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGRE 350
Query: 388 ALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLI 447
A+ FE+M+ G+ + +TF+ +LTAC+H GLVKEG+ YF+ M K Y + P+I+H+ ++
Sbjct: 351 AVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMM-KEYNLEPEIDHYVTVV 409
Query: 448 DLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTS 507
DLLGRAG L +A + K P+ V G LL +CR+ ++ IG+ A +F L P T
Sbjct: 410 DLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTG 469
Query: 508 PYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGE 567
P VLL N+YAS G W A RKM+K +G+KKEP+ S +E++ + F + +H + E
Sbjct: 470 PPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEE 529
Query: 568 INYMLKTLSL 577
I + +S+
Sbjct: 530 IYKKWEEISI 539
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 194/386 (50%), Gaps = 8/386 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
SL+ C++ ++L ++HA + V + N +++LY KCG + AR+VFD M R
Sbjct: 69 SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
++ SW+++I+G+ Q AL M PN + FAS + A S G+QIH
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH 188
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A ++K+ + +VG++L+ MY + G A+ V+ + N VS+NALIAGF E
Sbjct: 189 ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGE 248
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+F M R G F+++ + L +G +H +K + FVGNTI+
Sbjct: 249 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTIL 308
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K + +A K F +++KD+++WN+ + A + + ++ F+EM GV +
Sbjct: 309 DMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRK-CGVHLNQ 367
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK-LFN 362
TF SIL AC+ V+ GKQ + L ++ +V++ + GL++ + +F
Sbjct: 368 ITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFK 427
Query: 363 EMLHRNVVSWNTIIAA---HANHRLG 385
+ W ++ + H N ++G
Sbjct: 428 MPMKPTAAVWGALLGSCRMHKNAKIG 453
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 153/306 (50%), Gaps = 11/306 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +SLL + + G +HA +K DV V + +L++YA+CG+M +A VFD++
Sbjct: 167 TFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQL 226
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+N VSW+A+I+G + G+ L F++M + ++S SA AGI +L +G+
Sbjct: 227 ESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGK 286
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+HA+ +K G +FVGN+++ MY K G DA V+ + ++V++N+++ F +
Sbjct: 287 WVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYG 346
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ F+ M + G+ ++ +F L CS +++G + + LE
Sbjct: 347 LGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYV 406
Query: 241 TIMALYSKFNLIGEAEK-AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH-- 297
T++ L + L+ +A F++ + W + +C + + G + + DH
Sbjct: 407 TVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIG-----QFAADHVF 461
Query: 298 GVRPDD 303
+ PDD
Sbjct: 462 ELDPDD 467
>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Glycine max]
Length = 586
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 165/473 (34%), Positives = 274/473 (57%), Gaps = 4/473 (0%)
Query: 107 ISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNL 166
++ C+ + L +G+Q+H K G+ I VGNS+I MY K G +A V+ N+
Sbjct: 11 LNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRNV 70
Query: 167 VSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCL 226
+S+NA+IAG+ + E+ +F+ M +G +PD ++++ L+ CS ++ +GM +H
Sbjct: 71 ISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHAA 130
Query: 227 TVKCKLE--SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYE 284
++ + V ++ LY K + EA K F IEEK ++SW+T I + + +
Sbjct: 131 LIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNLK 190
Query: 285 KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ-DVGVGNA 343
+ + +F+E+ R D F +SI+ A A ++ GKQ+HA+ I++ ++ V N+
Sbjct: 191 EAMDLFRELRESRH-RMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVANS 249
Query: 344 LVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPD 403
+++MY KCGL + LF EML RNVVSW +I + H +G A++LF +M+ GI+PD
Sbjct: 250 VLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPD 309
Query: 404 SVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYT 463
SVT++ +L+AC+H+GL+KEG+ YF+ + I P +EH+ C++DLLGR G+L EA+
Sbjct: 310 SVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLI 369
Query: 464 KKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWG 523
+K PL + + TLLS CR+ DV +G+++ + L + + YV++SN+YA G W
Sbjct: 370 EKMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPANYVMVSNMYAHAGYWK 429
Query: 524 DVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
+ R+ LK GLKKE S +E+ F + H I EI+ +LK +
Sbjct: 430 ESEKIRETLKRKGLKKEAGRSWVEMDKEIHIFYNGDGMHPLIEEIHEVLKEME 482
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 227/447 (50%), Gaps = 26/447 (5%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
++ ++ +L+ CSK + L QG +H V K+G +V N ++++Y+KCG + A +VF+
Sbjct: 4 SRLLNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFN 63
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
+ RN++SW+AMI+G+ AL F +M +P+ Y ++S++ AC+ + +
Sbjct: 64 TLPVRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGE 123
Query: 119 GQQIHAYSLKFG--YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G QIHA ++ G Y + S V +L+ +Y+K ++A V+ E +++S++ LI G+
Sbjct: 124 GMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGY 183
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
+ ++ ++F+ + D F + + + + L +G +H T+K P
Sbjct: 184 AQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKV-----P 238
Query: 237 F------VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVF 290
+ V N+++ +Y K L EA+ FR + E++++SW I K + +F
Sbjct: 239 YGLLEMSVANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELF 298
Query: 291 KEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI-RMRLNQDVGVGNALVNMYA 349
EM ++G+ PD T+ ++L+AC+ ++ GK+ + L ++ V +V++
Sbjct: 299 NEMQ-ENGIEPDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLG 357
Query: 350 KCGLISCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSALKLFEQMKATGIKPDSV 405
+ G + + L +M L NV W T+++ H + +G ++ ++ G P +
Sbjct: 358 RGGRLKEAKNLIEKMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEIL--LRREGNNPANY 415
Query: 406 TFIGLLTACNHAGLVKEGEAYFNSMEK 432
+ + A HAG KE E ++++
Sbjct: 416 VMVSNMYA--HAGYWKESEKIRETLKR 440
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 190/576 (32%), Positives = 309/576 (53%), Gaps = 22/576 (3%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
SLL C KT AL Q + A ++ G Q + V+ +V+ + +M AR +FD +
Sbjct: 72 SLLRSC-KTVALLQKV--QAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDP 128
Query: 67 NLVSWSAMISGH-HQAGEHLLALEF--FSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
+ W+A+ G+ H A + F M + PN + F + +CA I + V+G++IH
Sbjct: 129 KVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIH 188
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+K G FV +LI +Y A ++ E N+V++ ++I+G++ +
Sbjct: 189 CEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVA 248
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG---- 239
+F L + ++ +G +EI D++ L ++ P+
Sbjct: 249 LARRLFDLAPERDVVLWNIMVSGYIEI----GDMKAARKL--------FDTMPYRDTMSW 296
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
NT++ Y+ + E+ F + E+++ SWN I +H + + L FK M D V
Sbjct: 297 NTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLV 356
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
P+D T ++L+ACA L ++ GK +H + + + VGNAL++MY+KCGLI + +
Sbjct: 357 VPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAME 416
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F M +++++WN++I A H G AL LF QMK G KPD +TFIG+L +C H GL
Sbjct: 417 VFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGL 476
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V+EG +YFNSM Y I+P IEH+ C++DL GRAG L A E+ K+ P+ D ++ LL
Sbjct: 477 VEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALL 536
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
ACR+ +++ + E ++L L+P + YVLLSN+Y G W DVA + +++D+G KK
Sbjct: 537 GACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKK 596
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P S+IEV + +F + HS+ EI +LK L
Sbjct: 597 LPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGL 632
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 170/378 (44%), Gaps = 15/378 (3%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
F S + +C + L Q++ A + G+ +V ++++ ++ + + A ++
Sbjct: 70 FISLLRSCKTVALL---QKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFP 126
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
+P + +NA+ G+ N + +F M + P+ F+F L+ C+ +G
Sbjct: 127 DPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEE 186
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
+HC +K LE N FV T++ +YS IG A K F + E+++++W + I+ C
Sbjct: 187 IHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNR 246
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
+F D D + +++ + ++ ++ L +D N
Sbjct: 247 VALARRLF-----DLAPERDVVLWNIMVSGYIEIGDMKAARK----LFDTMPYRDTMSWN 297
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG-IK 401
++N YA G + +LF EM RNV SWN +I +A++ L+ F++M G +
Sbjct: 298 TMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVV 357
Query: 402 PDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
P+ T + +L+AC G + G+ + + T G I LID+ + G + A E
Sbjct: 358 PNDATLVTVLSACARLGALDLGK-WVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAME 416
Query: 462 YTKKFPLGQDPIVLGTLL 479
+ L +D I +++
Sbjct: 417 VFESMDL-KDLITWNSMI 433
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L C++ AL G +H +G + + V N ++++Y+KCG + A +VF+ M
Sbjct: 362 TLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESM 421
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACA 111
++L++W++MI G G AL F QM + P+ F + +C
Sbjct: 422 DLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCT 472
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 188/565 (33%), Positives = 304/565 (53%), Gaps = 12/565 (2%)
Query: 20 QGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG-- 77
Q +S +L QP V+ N +L+ Y K G + A K+FD S+R+ SW+ ++SG
Sbjct: 64 QALSDAHKLLHFMPQPSVVSYNTILSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCV 123
Query: 78 -HHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF 136
+H+ GE L + P+ + +A I C L GQQ+HA +K +F
Sbjct: 124 KNHKLGEGLTHFMKMRCSSVRPDNFTYAIIIPCC----DLGFGQQVHADIVKVCSDLDAF 179
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
+G +L+ MY +VG DA V+ LV++NA+I+ + + + +K +F+ + R+G
Sbjct: 180 IGTNLLRMYAEVGEIGDARKVFDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREG 239
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
+ D +++A L + + + M +H L ++ S+ F N ++ LYSK + A
Sbjct: 240 ISADEYTYAIVLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASAS 299
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
+ F I ++D++SW I E+ + +F +M + P+ FTF +L ACA
Sbjct: 300 RLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGD-IEPNSFTFGGLLGACADA 358
Query: 317 ASVQHGKQIHAHLIRMRL-NQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
+ Q G+ H +++ L DV VG+A+V+MY+KCG + + + F EM R++ SWN I
Sbjct: 359 NAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGI 418
Query: 376 IAAHANHRLGGSALKLFEQM---KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
I +A + G ALKL+ +M +GI P+ VTF+G+L AC+H GL+KEG +YF M
Sbjct: 419 ICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVD 478
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGE 492
+ I P EH+TC++DLLGRAG L EAE P+ D ++ G LL AC+L DV +
Sbjct: 479 KHLIKPTAEHYTCMVDLLGRAGLLQEAEALILALPIKPDNVMWGALLGACKLHGDVQMTR 538
Query: 493 RLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTF 552
R A+ L+ +P +S YVLL+N Y G WG+ R++++ G++K S +E+
Sbjct: 539 RTAEHLYTNEPRNSSNYVLLANSYTDIGEWGEAVEIREVMEARGVEKTAGCSWVEIGTCM 598
Query: 553 EKFTVAEFSHSKIGEINYMLKTLSL 577
F + H +I + +L L L
Sbjct: 599 HSFLAGDXLHPQIEVASQVLPRLYL 623
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 181/383 (47%), Gaps = 36/383 (9%)
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
+ K +HA +K G + + N L+ Y+ SDA + +P++VS+N +++G
Sbjct: 31 MYKAPVLHASLVKNGLIAHVYQCNILLQAYINSQALSDAHKLLHFMPQPSVVSYNTILSG 90
Query: 176 F-------------------------------VENQQPEKGFEVFKLMLRQGLLPDRFSF 204
+ V+N + +G F M + PD F++
Sbjct: 91 YFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTY 150
Query: 205 AGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE 264
A + C DL G +H VK + + F+G ++ +Y++ IG+A K F +
Sbjct: 151 AIIIPCC----DLGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPS 206
Query: 265 KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ 324
+ L++WN I+ S +K + +F+++ + G+ D++T+A +L A V Q
Sbjct: 207 RGLVTWNAMISCYSKYGRGDKSIGLFRQLXRE-GISADEYTYAIVLNEFAARWQVFEAMQ 265
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
+H+ +I D NALVN+Y+KCG ++ + +LF E+ ++VVSW II
Sbjct: 266 VHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGH 325
Query: 385 GGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFT 444
A+ LF QM+ I+P+S TF GLL AC A ++G + + K + D+ +
Sbjct: 326 MEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGS 385
Query: 445 CLIDLLGRAGKLLEAEEYTKKFP 467
++D+ + G++ +A ++ P
Sbjct: 386 AVVDMYSKCGEMGDALRAFQEMP 408
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+ LL C+ A Q+G H VLK G + DV+V + V+++Y+KCG+M A + F E
Sbjct: 347 TFGGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQE 406
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL------PNEYIFASAISACA 111
M ER++ SW+ +I G+ Q G + AL+ +++M LL PNE F + AC+
Sbjct: 407 MPERDIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACS 461
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 178/574 (31%), Positives = 313/574 (54%), Gaps = 5/574 (0%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
++L+ C+ T++L+ G+ +H +L+ G + DV V ++N+Y KCG + A F + R
Sbjct: 110 AILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHR 169
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIH 123
++VSW+AMI+ Q + LA + +M L +PN+ + +A L +G+ ++
Sbjct: 170 DVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVY 229
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
S V NS ++M+ G DA ++ + + ++V++N +I +V+N+
Sbjct: 230 GLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFG 289
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ +F + + G+ + +F L + + L KG ++H L + + + V +M
Sbjct: 290 EAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALM 349
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+LY + G+A K F + KD+I+W A + ++ L +F+EM + G RP
Sbjct: 350 SLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLE-GRRPTS 408
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T ++L CA LA++Q G+QIH+H+I R ++ V AL+NMY KCG ++ + +F +
Sbjct: 409 ATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEK 468
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M R+++ WN+++ A+A H L+LF QM+ G+K D+V+F+ +L+A +H+G V +G
Sbjct: 469 MAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDG 528
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP-LGQDPIVLGTLLSAC 482
YF +M + + I+P E + C++DLLGRAG++ EA + K D I+ TLL AC
Sbjct: 529 YQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGAC 588
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
R + A+Q+ P+ + YV+LSN+YA+ G W V RK+++ G+KKEP
Sbjct: 589 RTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPG 648
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
S IE+ +F + SH + I L L+
Sbjct: 649 RSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLN 682
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 132/479 (27%), Positives = 252/479 (52%), Gaps = 8/479 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+LL CS K + G +H V G + + +V H++ +YA+CG + A++VF+ + +
Sbjct: 9 ALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERK 68
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
++ +W+ MI + Q G++ AL F QM ++P + + + ++ACA +SL G +IH
Sbjct: 69 DVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIH 128
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
L+ G+ FVG +LI+MY K G A + ++VS+ A+IA V++ Q
Sbjct: 129 GQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFA 188
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+++ M G++P++ + N L +G ++ L +ES+ V N+ +
Sbjct: 189 LARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAV 248
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
++ L+G+A + F + ++D+++WN I ++ + + +F + D GV+ +D
Sbjct: 249 NMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQD-GVKAND 307
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
TF +L L S+ GK IH + ++D V AL+++Y +C ++K+F +
Sbjct: 308 ITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVD 367
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH-AGLVKE 422
M ++V++W + A+A + AL+LF++M+ G +P S T + +L C H A L K
Sbjct: 368 MGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKG 427
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+ + + +E + + +E T LI++ G+ GK+ EA +K +D +V ++L A
Sbjct: 428 RQIHSHIIENRFRMEMVVE--TALINMYGKCGKMAEAMSVFEKMA-KRDILVWNSMLGA 483
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 175/355 (49%), Gaps = 2/355 (0%)
Query: 98 PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV 157
P+ F + + C+ +++ G+++H + G+ + V LI MY + G +A V
Sbjct: 2 PDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 61
Query: 158 YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDL 217
+ ++ ++ +I + + ++ +F M + ++P + ++ L C+ + L
Sbjct: 62 FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 121
Query: 218 RKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC 277
+ GM +H ++ E + FVG ++ +Y+K + A +F+ +E +D++SW IAAC
Sbjct: 122 KDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAAC 181
Query: 278 SHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD 337
+ +++ M D GV P+ T ++ A + GK ++ + + D
Sbjct: 182 VQHDQFALARWLYRRMQLD-GVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESD 240
Query: 338 VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA 397
V V N+ VNM+ GL+ + +LF +M+ R+VV+WN +I + + G A++LF +++
Sbjct: 241 VRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQ 300
Query: 398 TGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
G+K + +TF+ +L + +G+ + + K G D T L+ L GR
Sbjct: 301 DGVKANDITFVLMLNVYTSLTSLAKGKV-IHELVKEAGYDRDAVVATALMSLYGR 354
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 130/263 (49%), Gaps = 2/263 (0%)
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKA 258
PD F L+ CS + ++ G +H E N V ++ +Y++ + EA++
Sbjct: 2 PDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 61
Query: 259 FRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
F ++E KD+ +W I DY++ L +F +M + V P T+ +IL ACA S
Sbjct: 62 FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQM-QEEDVMPTKVTYVAILNACASTES 120
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA 378
++ G +IH +++ DV VG AL+NMY KCG + ++ F + HR+VVSW +IAA
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 180
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISP 438
H A L+ +M+ G+ P+ +T + A + EG+ + + + +
Sbjct: 181 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGK-FVYGLVSSGVMES 239
Query: 439 DIEHFTCLIDLLGRAGKLLEAEE 461
D+ +++ G AG L +A
Sbjct: 240 DVRVMNSAVNMFGNAGLLGDARR 262
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 93/184 (50%), Gaps = 4/184 (2%)
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+PD F ++L C+ +V HG+++H H+ Q+ V L+ MYA+CG + + +
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F + ++V +W +I + AL +F QM+ + P VT++ +L AC
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 420 VKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
+K+G E + +++ G D+ T LI++ + G + A + K+ +D + +
Sbjct: 121 LKDGMEIHGQILQQ--GFEGDVFVGTALINMYNKCGSVRGAWDSFKRLE-HRDVVSWTAM 177
Query: 479 LSAC 482
++AC
Sbjct: 178 IAAC 181
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 72/121 (59%), Gaps = 3/121 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L C+ ALQ+G +H+ +++ + +++V ++N+Y KCGKM A VF++M
Sbjct: 410 TLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKM 469
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
++R+++ W++M+ + Q G + L+ F+QM L + F S +SA + S+ G
Sbjct: 470 AKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGY 529
Query: 121 Q 121
Q
Sbjct: 530 Q 530
>gi|302782902|ref|XP_002973224.1| hypothetical protein SELMODRAFT_98955 [Selaginella moellendorffii]
gi|300158977|gb|EFJ25598.1| hypothetical protein SELMODRAFT_98955 [Selaginella moellendorffii]
Length = 546
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 173/531 (32%), Positives = 294/531 (55%), Gaps = 10/531 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L CS ++ G +HA ++ +G D +VS +L +Y+KC K+ A+KVFD + ++
Sbjct: 16 ILGACSNLGDVETGRKIHARMVFLGWDTDTVVSTAILGMYSKCEKLGDAKKVFDSLRRKD 75
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHA 124
+VSW+A+I+ Q G +ALE F +M L PNE F + ++AC + +L G +++
Sbjct: 76 VVSWTAIITAFSQLGRPRVALELFWEMDLDGVKPNESTFVNILAACTYMDALEDGDKLYK 135
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
++ GY + FVG++ ++MY + G +A + E + S+NA++ ++++ +
Sbjct: 136 RAISCGYGADVFVGSTAVTMYSRFGNLVEAKAAFDHLREKSTGSWNAIVRAYIQHGHISQ 195
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
++K M G PD F+ L CS L +G +H + + + G+ I+A
Sbjct: 196 AISLYKEMDVHGAEPDTFTHVCLLGACSSLGALEEGERIH---ARMGDKPDGLAGSAIVA 252
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y+K I A AF + +++ WN IA +++ L ++ M N G+ D +
Sbjct: 253 MYAKCGGIEHAMTAFTKMSSSNVVVWNALIAGYVQGEHWQEALDLYHAM-NLEGLEADIY 311
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
TF+S+L AC+G + G+ +HA ++ L V + N LVNM+AKCG ++ + ++F M
Sbjct: 312 TFSSVLGACSGAKDLSEGRAVHARIVSGGLEVVVPLQNGLVNMFAKCGSLTLALEMFRGM 371
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
RN VSWN+++ A H GG A +LF++M G +P TF +L C+H+GL+++G
Sbjct: 372 ASRNTVSWNSMVTAFCQHGEGGGAFELFKEMLLEGAEPHEQTFTSILNFCSHSGLLQDGF 431
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTK-KFPLGQDPIVLGTLLSACR 483
YF M +GI+P EH+ C+IDLLGR G + AE+ + FP I +LL+ACR
Sbjct: 432 GYFFDMVDEFGIAPVDEHYRCVIDLLGRTGHIAAAEKMVEHAFP--GSVIAWTSLLAACR 489
Query: 484 LRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKD 534
R+V I R ++L ++P +P V L+NL A G W V ++M+++
Sbjct: 490 TYRNVEIAARATEELMRVRPENPAPLVQLANLCAEAGRWDAVERVKRMMEE 540
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 169/328 (51%), Gaps = 4/328 (1%)
Query: 98 PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV 157
PN F + AC+ + + G++IHA + G+ + + V +++ MY K DA V
Sbjct: 8 PNSVTFLWILGACSNLGDVETGRKIHARMVFLGWDTDTVVSTAILGMYSKCEKLGDAKKV 67
Query: 158 YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDL 217
+ ++VS+ A+I F + +P E+F M G+ P+ +F L C+ + L
Sbjct: 68 FDSLRRKDVVSWTAIITAFSQLGRPRVALELFWEMDLDGVKPNESTFVNILAACTYMDAL 127
Query: 218 RKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC 277
G L+ + C ++ FVG+T + +YS+F + EA+ AF + EK SWN + A
Sbjct: 128 EDGDKLYKRAISCGYGADVFVGSTAVTMYSRFGNLVEAKAAFDHLREKSTGSWNAIVRAY 187
Query: 278 SHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD 337
+ +S++KEM + HG PD FT +L AC+ L +++ G++IHA RM D
Sbjct: 188 IQHGHISQAISLYKEM-DVHGAEPDTFTHVCLLGACSSLGALEEGERIHA---RMGDKPD 243
Query: 338 VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA 397
G+A+V MYAKCG I + F +M NVV WN +IA + AL L+ M
Sbjct: 244 GLAGSAIVAMYAKCGGIEHAMTAFTKMSSSNVVVWNALIAGYVQGEHWQEALDLYHAMNL 303
Query: 398 TGIKPDSVTFIGLLTACNHAGLVKEGEA 425
G++ D TF +L AC+ A + EG A
Sbjct: 304 EGLEADIYTFSSVLGACSGAKDLSEGRA 331
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 212/436 (48%), Gaps = 21/436 (4%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
++L C+ AL+ G L+ + G DV V + + +Y++ G ++ A+ FD + E+
Sbjct: 116 NILAACTYMDALEDGDKLYKRAISCGYGADVFVGSTAVTMYSRFGNLVEAKAAFDHLREK 175
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIH 123
+ SW+A++ + Q G A+ + +M + P+ + + AC+ + +L +G++IH
Sbjct: 176 STGSWNAIVRAYIQHGHISQAISLYKEMDVHGAEPDTFTHVCLLGACSSLGALEEGERIH 235
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A + G G+++++MY K G A+ + + N+V +NALIAG+V+ + +
Sbjct: 236 A---RMGDKPDGLAGSAIVAMYAKCGGIEHAMTAFTKMSSSNVVVWNALIAGYVQGEHWQ 292
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ +++ M +GL D ++F+ L CS + DL +G +H V LE + N ++
Sbjct: 293 EALDLYHAMNLEGLEADIYTFSSVLGACSGAKDLSEGRAVHARIVSGGLEVVVPLQNGLV 352
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+++K + A + FR + ++ +SWN+ + A + +FKEM + G P +
Sbjct: 353 NMFAKCGSLTLALEMFRGMASRNTVSWNSMVTAFCQHGEGGGAFELFKEMLLE-GAEPHE 411
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG------NALVNMYAKCGLISCS 357
TF SIL C+ +Q G ++ + G+ ++++ + G I+ +
Sbjct: 412 QTFTSILNFCSHSGLLQDGFGYFFDMV-----DEFGIAPVDEHYRCVIDLLGRTGHIAAA 466
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDS-VTFIGLLTACNH 416
K+ +V++W +++AA +R A + E++ ++P++ + L C
Sbjct: 467 EKMVEHAFPGSVIAWTSLLAACRTYRNVEIAARATEELMR--VRPENPAPLVQLANLCAE 524
Query: 417 AGLVKEGEAYFNSMEK 432
AG E ME+
Sbjct: 525 AGRWDAVERVKRMMEE 540
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 127/245 (51%), Gaps = 5/245 (2%)
Query: 195 QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGE 254
+G+ P+ +F L CS D+ G +H V +++ V I+ +YSK +G+
Sbjct: 4 EGIRPNSVTFLWILGACSNLGDVETGRKIHARMVFLGWDTDTVVSTAILGMYSKCEKLGD 63
Query: 255 AEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA 314
A+K F + KD++SW I A S L +F EM D GV+P++ TF +ILAAC
Sbjct: 64 AKKVFDSLRRKDVVSWTAIITAFSQLGRPRVALELFWEMDLD-GVKPNESTFVNILAACT 122
Query: 315 GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNT 374
+ +++ G +++ I DV VG+ V MY++ G + + F+ + ++ SWN
Sbjct: 123 YMDALEDGDKLYKRAISCGYGADVFVGSTAVTMYSRFGNLVEAKAAFDHLREKSTGSWNA 182
Query: 375 IIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTY 434
I+ A+ H A+ L+++M G +PD+ T + LL AC+ G ++EGE M
Sbjct: 183 IVRAYIQHGHISQAISLYKEMDVHGAEPDTFTHVCLLGACSSLGALEEGERIHARM---- 238
Query: 435 GISPD 439
G PD
Sbjct: 239 GDKPD 243
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 94/164 (57%), Gaps = 3/164 (1%)
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G+RP+ TF IL AC+ L V+ G++IHA ++ + + D V A++ MY+KC + +
Sbjct: 5 GIRPNSVTFLWILGACSNLGDVETGRKIHARMVFLGWDTDTVVSTAILGMYSKCEKLGDA 64
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
K+F+ + ++VVSW II A + AL+LF +M G+KP+ TF+ +L AC +
Sbjct: 65 KKVFDSLRRKDVVSWTAIITAFSQLGRPRVALELFWEMDLDGVKPNESTFVNILAACTYM 124
Query: 418 GLVKEGEA-YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
+++G+ Y ++ YG D+ + + + R G L+EA+
Sbjct: 125 DALEDGDKLYKRAISCGYG--ADVFVGSTAVTMYSRFGNLVEAK 166
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 95/175 (54%), Gaps = 4/175 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+L CS K L +G ++HA ++ G++ V + N ++N++AKCG + LA ++F M
Sbjct: 312 TFSSVLGACSGAKDLSEGRAVHARIVSGGLEVVVPLQNGLVNMFAKCGSLTLALEMFRGM 371
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKG- 119
+ RN VSW++M++ Q GE A E F +M L P+E F S ++ C+ L G
Sbjct: 372 ASRNTVSWNSMVTAFCQHGEGGGAFELFKEMLLEGAEPHEQTFTSILNFCSHSGLLQDGF 431
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIA 174
+FG A + +I + + G+ + A + AF +++++ +L+A
Sbjct: 432 GYFFDMVDEFGIAPVDEHYRCVIDLLGRTGHIAAAEKMVEHAFPGSVIAWTSLLA 486
>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
Length = 716
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/556 (31%), Positives = 306/556 (55%), Gaps = 9/556 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
++SL+ C+K +AL++G LH ++ G + D+ + +L +YAKCG + A++VF+ M
Sbjct: 33 VTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGME 92
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
++L +WS++I+ + +AG +A+ + +M + PN FA A+ CA + L G+
Sbjct: 93 IKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRA 152
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
IH L + +SL++MY+K +A V+ N+ S+ A+I+ +V+ +
Sbjct: 153 IHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGE 212
Query: 182 PEKGFEVFKLMLR-QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ E+F M + + + P+ ++FA L +L KG +H ++N V N
Sbjct: 213 HAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQN 272
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y K EA K F + +++ISW + IAA + + ++ L++FK M V
Sbjct: 273 ALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMD----VE 328
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P +F+S L ACA L ++ G++IH ++ L + +L++MYA+CG + + ++
Sbjct: 329 PSGVSFSSALNACALLGALDEGREIHHRVVEANLASP-QMETSLLSMYARCGSLDDARRV 387
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN M R+ S N +IAA H AL+++ +M+ GI D +TF+ +L AC+H LV
Sbjct: 388 FNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTSLV 447
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+ + S+ +G+ P +EH+ C++D+LGR+G+L +AEE + P D + TLLS
Sbjct: 448 ADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLS 507
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
C+ D+ GER A+++F L P T PYV LSN+YA+ + D RK +++ G+ +
Sbjct: 508 GCKRHGDLDRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTRP 567
Query: 541 PSYSMIEVQGTFEKFT 556
+ S IE+ FT
Sbjct: 568 VAVSYIEIDNELHMFT 583
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 210/389 (53%), Gaps = 8/389 (2%)
Query: 74 MISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFG 130
MI+ + G L ALE + +M ++ +++I S ++AC +Q+L +G+++H + + G
Sbjct: 1 MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60
Query: 131 YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFK 190
+ + + +L+ MY K G DA V+ +L +++++IA + + E +++
Sbjct: 61 FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120
Query: 191 LMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN 250
M+ +G+ P+ +FA L C+ L G +H + K+ + + ++++ +Y K +
Sbjct: 121 RMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCD 180
Query: 251 LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
+ EA K F ++ +++ S+ I+A ++ + L +F MS + P+ +TFA+IL
Sbjct: 181 EMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATIL 240
Query: 311 AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVV 370
A GL +++ G+++H HL + +V V NALV MY KCG + K+F+ M RNV+
Sbjct: 241 GAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVI 300
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSM 430
SW ++IAA+A H AL LF++M ++P V+F L AC G + EG + +
Sbjct: 301 SWTSMIAAYAQHGNPQEALNLFKRMD---VEPSGVSFSSALNACALLGALDEGREIHHRV 357
Query: 431 EKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+ SP +E T L+ + R G L +A
Sbjct: 358 VEANLASPQME--TSLLSMYARCGSLDDA 384
>gi|449443642|ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449492832|ref|XP_004159115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 663
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 189/628 (30%), Positives = 308/628 (49%), Gaps = 64/628 (10%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF----------- 60
CS ++ LH K G + ++ N ++++Y KC + A +VF
Sbjct: 3 CSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFSW 62
Query: 61 --------------------DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL--- 97
+M ER+ VSW+ +IS G H+ +L F +M +
Sbjct: 63 NCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGCQ 122
Query: 98 PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV 157
PN +AS +SACA I G+ +HA ++ VGN L+ MY K G + V
Sbjct: 123 PNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKRV 182
Query: 158 YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDL 217
+ E N+V++ +LI+G E+ +++F M + ++ D F A L +C ++
Sbjct: 183 FNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGETNI 242
Query: 218 RKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC 277
G LH TVK + S+ VGN +++Y+K +A AF + D+ISW T I +
Sbjct: 243 SIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMITSF 302
Query: 278 SHCADYEKGLSVFKEMSNDH------------------------------GVRPDDFTFA 307
SH + E+ F M + VRPD TF
Sbjct: 303 SHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITFV 362
Query: 308 SILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR 367
+++ AC+ LA + G QI + +++ L DV V N+ + +Y++CG I + LF+ + +
Sbjct: 363 TMIGACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQEK 422
Query: 368 NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYF 427
N++SWN+I+ +A + G +++F+ M G KPD +T+I +L+ C+H+GLVKE + +F
Sbjct: 423 NLISWNSIMGGYAQNGEGMKVIEIFQNMLMAGCKPDHITYIAILSGCSHSGLVKEAKYHF 482
Query: 428 NSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRD 487
NSM K +GIS +EHF C++DL GRAG L A + + P + + G LLSACR+ D
Sbjct: 483 NSMTKDFGISVTLEHFVCMVDLFGRAGLLKLALDMIDQMPFKPNASIWGALLSACRIHHD 542
Query: 488 VVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIE 547
+ E K L L Y+LL+N Y+S G V+ R+++K+ ++K+P S IE
Sbjct: 543 TEMAELAMKNLLELNTENFESYILLANTYSSFGRLECVSEVRQVMKEKRVQKDPGCSWIE 602
Query: 548 VQGTFEKFTVAEFSHSKIGEINYMLKTL 575
V FT + SH ++ +I L+ +
Sbjct: 603 VCNRVHVFTANDTSHPQVKDIYKALEDI 630
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 206/416 (49%), Gaps = 47/416 (11%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L C+ Q G LHA ++++ DV+V N ++++YAKCG + +++VF+ +
Sbjct: 127 TYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKRVFNTL 186
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
E N+V+W+++ISG G + F QM ++ + +I A+ + C G ++ G+
Sbjct: 187 REHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGETNISIGE 246
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV----------------------- 157
Q+H +++K G S VGN+ +SMY K G A L
Sbjct: 247 QLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMITSFSHSG 306
Query: 158 --------YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
+ E N++S+NA++ + +N E+G +++ LMLRQ + PD +F +
Sbjct: 307 NVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITFVTMIG 366
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
CS + G + VK L S+ V N+ + LYS+ I EA+ F I+EK+LIS
Sbjct: 367 ACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQEKNLIS 426
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
WN+ + + + K + +F+ M G +PD T+ +IL+ C+ V+ K H
Sbjct: 427 WNSIMGGYAQNGEGMKVIEIFQNMLM-AGCKPDHITYIAILSGCSHSGLVKEAKY---HF 482
Query: 330 IRMRLNQDVGVGNAL------VNMYAKCGLISCSYKLFNEMLHR-NVVSWNTIIAA 378
M +D G+ L V+++ + GL+ + + ++M + N W +++A
Sbjct: 483 NSM--TKDFGISVTLEHFVCMVDLFGRAGLLKLALDMIDQMPFKPNASIWGALLSA 536
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 187/414 (45%), Gaps = 64/414 (15%)
Query: 109 ACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVS 168
AC+ + + Q+H S K+G+ + + NS+I MY+K A V+ +P+L S
Sbjct: 2 ACSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFS 61
Query: 169 FNALIAGFVE-----------NQQPEK--------------------GFEVFKLMLRQGL 197
+N +I G+ + Q PE+ F M QG
Sbjct: 62 WNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGC 121
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
P+ ++A L C+ D + G LH V+ + + VGN ++ +Y+K LI +++
Sbjct: 122 QPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKR 181
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F + E ++++W + I+ +H E+ +F +M D V D+F A+IL C G
Sbjct: 182 VFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKD-CVIMDNFILATILGVCEGET 240
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG----------------LISCSYKL- 360
++ G+Q+H ++ +N V VGNA ++MYAKCG +IS + +
Sbjct: 241 NISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMIT 300
Query: 361 --------------FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVT 406
FN M RNV+SWN ++ A+ + LKL+ M ++PD +T
Sbjct: 301 SFSHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWIT 360
Query: 407 FIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
F+ ++ AC+ + K G + K G+ D+ I L R G++ EA+
Sbjct: 361 FVTMIGACSELAISKLGTQILSQAVKV-GLGSDVSVVNSAITLYSRCGRIEEAQ 413
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 99/252 (39%), Gaps = 74/252 (29%)
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL----------- 360
AC+ + ++ Q+H + + + N++++MY KC I + ++
Sbjct: 2 ACSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFS 61
Query: 361 --------------------FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGI 400
F +M R+ VSWNTII+A ++H L +L F +M G
Sbjct: 62 WNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGC 121
Query: 401 KPDSVTFIGLLTACN-----------HA------------------------GLVKEGEA 425
+P+S+T+ +L+AC HA GL+ +
Sbjct: 122 QPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKR 181
Query: 426 YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY---TKKFPLGQDPIVLGTLLSAC 482
FN++ + ++ +T LI + G E + +K + D +L T+L C
Sbjct: 182 VFNTLRE-----HNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVC 236
Query: 483 RLRRDVVIGERL 494
++ IGE+L
Sbjct: 237 EGETNISIGEQL 248
>gi|125559296|gb|EAZ04832.1| hypothetical protein OsI_27010 [Oryza sativa Indica Group]
Length = 700
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 183/541 (33%), Positives = 291/541 (53%), Gaps = 8/541 (1%)
Query: 12 CSKTKALQQGISL----HAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
C+ A+ QG + A + +P+V V +++++AKCG + AR VF+ M R+
Sbjct: 160 CAALGAVAQGRKVWEMVEADIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRD 219
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
L +W+AMI G +G L ++ F+ M + I A+ ISAC L G +H
Sbjct: 220 LAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHG 279
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
++K G + +V N+L+ MY K G A ++ ++VS+++LI G+ +N
Sbjct: 280 CAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNV 339
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
+F M+ G+ P+ + A L SV +R G +HC +++ LE + FV + ++
Sbjct: 340 SVSLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALID 399
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
LYSK LI AE F L +KDL WN+ +A + + + + G++PD
Sbjct: 400 LYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKV-GLKPDHV 458
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T S+L C + GK++HA++I+ +N V NAL++MY KCG + + ++F M
Sbjct: 459 TVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLM 518
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
RN V++N +I++ H AL F+ MK GI PD VTF+ LL+ C+HAGL+ +G
Sbjct: 519 TERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGL 578
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRL 484
++SM Y ISP+ EH++C++DL R GKL EA + + VLG LL+ACR+
Sbjct: 579 HLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVLGGLLAACRV 638
Query: 485 RRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYS 544
+ I E + K++F P ++LLSN+YA GMW DV R M+++ LKKE S
Sbjct: 639 HNRMDIAELVGKRIFEQNPNDPGYHILLSNIYADAGMWSDVTRIRTMIQERNLKKETGNS 698
Query: 545 M 545
+
Sbjct: 699 L 699
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 226/466 (48%), Gaps = 10/466 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S +SLL Q+ LHAAVL G ++ ++ YAK G + A +VFD M
Sbjct: 50 SHASLLLRLQSCPDFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGM 109
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKG 119
RN +W+A+I G AG ALE F M + + + + I ACA + ++ +G
Sbjct: 110 PRRNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQG 169
Query: 120 QQIHAY---SLKFGYASIS-FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
+++ + G A + FV +L+ M+ K G +A V+ +L ++ A+I G
Sbjct: 170 RKVWEMVEADIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGG 229
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
V + + ++F M +G D A + C + +L+ G LH VK +
Sbjct: 230 TVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGD 289
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
+V N ++ +Y K + A+ F KD++SW++ I S + +S+F EM +
Sbjct: 290 IYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMIS 349
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
G+ P+ T ASIL + L ++ GK+IH IR L + V +AL+++Y+K GLI
Sbjct: 350 -LGINPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIR 408
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ +F L +++ WN+++A +A + SA ++ G+KPD VT + +L CN
Sbjct: 409 VAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCN 468
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
++ +G+ + K Y I+ L+D+ + G L A+E
Sbjct: 469 QHHMLIQGKELHAYVIK-YCINSVCSVNNALLDMYCKCGFLEVAKE 513
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 193/363 (53%), Gaps = 5/363 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
++++ C + LQ G +LH +K G D+ VSN ++++Y KCG + +A +F +
Sbjct: 259 ATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNS 318
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQI 122
+++VSWS++I G+ Q G H +++ F +M L PN AS + + ++ + G++I
Sbjct: 319 KDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKEI 378
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H +S++ G FV ++LI +Y K G A ++ + +L +N+++AG+ N
Sbjct: 379 HCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYS 438
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
+ F +L+ + GL PD + L +C+ + L +G LH +K + S V N +
Sbjct: 439 DSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNAL 498
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y K + A++ F+L+ E++ +++N I++ ++ LS F M D G+ PD
Sbjct: 499 LDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRD-GIAPD 557
Query: 303 DFTFASILAACAGLASVQHGKQI-HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
TF ++L+ C+ + G + H+ L ++ + + +V++Y++CG + ++
Sbjct: 558 KVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFM 617
Query: 362 NEM 364
+ M
Sbjct: 618 SNM 620
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 152/306 (49%), Gaps = 9/306 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ +++S+L S K ++ G +H ++ G++ V + +++LY+K G + +A +F
Sbjct: 356 SSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFW 415
Query: 62 EMSERNLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVK 118
+++L W++M++G+ G AL ++ L P+ S + C L++
Sbjct: 416 LTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQ 475
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+++HAY +K+ S+ V N+L+ MY K G+ A V+ E N V++N LI+ F +
Sbjct: 476 GKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGK 535
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPF 237
+ ++ F LM R G+ PD+ +F L CS + + KG+ + H + +
Sbjct: 536 HNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKE 595
Query: 238 VGNTIMALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAACS--HCADYEK--GLSVFKE 292
+ I+ LYS+ + EA + EE ++ +AAC + D + G +F++
Sbjct: 596 HYSCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFEQ 655
Query: 293 MSNDHG 298
ND G
Sbjct: 656 NPNDPG 661
>gi|413932453|gb|AFW67004.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 913
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 177/545 (32%), Positives = 296/545 (54%), Gaps = 16/545 (2%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+H+ ++ G D + + ++ LY++CG + A +VF M ++V +++++S + GE
Sbjct: 158 VHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGE 217
Query: 84 HLLALEFFSQMH---LLPNEYIFASAISACA-GIQSLVKGQQIHAYSLKFGYASISFVGN 139
A++ QM L PNE+ S ++ C GI G+QIH Y LK + +
Sbjct: 218 LARAVDVLCQMTRQGLQPNEHTMTSMLAECPRGI-----GEQIHGYMLKVMGSQSVYAST 272
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
+LI Y + G A V+ N+VS+ +++ + + + + VF M+ +G+ P
Sbjct: 273 ALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQP 332
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
+ F+F+ L C + G +HC +K L ++ V N ++++Y + + E E
Sbjct: 333 NEFAFSIALSAC---GSVCLGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVL 389
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
IE DL+SW I+A EK +++ +M ++ G P+D+ F+S L++CA LA +
Sbjct: 390 GKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSE-GFTPNDYAFSSGLSSCADLALL 448
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
G+Q+H +++ + V GNAL+NMY+KCG I + F+ M +V+SWN++I
Sbjct: 449 HQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGL 508
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
A H AL+ F +M ++ +PD TF+ +L CNHAGLVKEGE +F M YG++P
Sbjct: 509 AQHGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPT 568
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLF 499
H+ C+ID+LGR G+ EA + P D ++ TLL++C+L R++ IG+ A +L
Sbjct: 569 PSHYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLASCKLHRNLDIGKLAADKLM 628
Query: 500 HLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAE 559
L ++ YVL+SNLYA W D R+ + + G+KK+ +S IEV+ E A
Sbjct: 629 ELSERDSASYVLMSNLYAMHEEWRDAERVRRRMDEIGVKKDAGWSWIEVKNEVE---AAR 685
Query: 560 FSHSK 564
F H K
Sbjct: 686 FVHQK 690
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 202/393 (51%), Gaps = 11/393 (2%)
Query: 35 PDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM 94
PDV++ L+ K G++ A +FD M +N+V+W+ ISG + G A F+ M
Sbjct: 68 PDVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADM 127
Query: 95 ---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
+ PN++ +A++ACA +L G+Q+H+ +++ G+A+ +++G+ LI +Y + G
Sbjct: 128 LESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSL 187
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
A V+ P++V + +L++ N + + +V M RQGL P+ + L C
Sbjct: 188 RAAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAEC 247
Query: 212 SVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
G +H +K + + ++ YS++ G A+ F +E K+++SW
Sbjct: 248 PRG----IGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWC 303
Query: 272 TFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
+ + C + L VF EM ++ GV+P++F F+ L+AC SV G+QIH I+
Sbjct: 304 SMMQLCIRDGRLDDALRVFSEMISE-GVQPNEFAFSIALSAC---GSVCLGRQIHCSAIK 359
Query: 332 MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
L D+ V NAL++MY + G +S + ++ + ++VSW I+A+ + A+ L
Sbjct: 360 RDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVAL 419
Query: 392 FEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
QM + G P+ F L++C L+ +G
Sbjct: 420 LLQMHSEGFTPNDYAFSSGLSSCADLALLHQGR 452
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 164/316 (51%), Gaps = 11/316 (3%)
Query: 146 MKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA 205
MK G DAL ++ N+V++ I+G N +PE +F ML G+ P+ F+
Sbjct: 81 MKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPNDFACN 140
Query: 206 GGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK 265
L C+ + L G +H L V+ ++ ++G+ ++ LYS+ + AE+ FR +E
Sbjct: 141 AALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAP 200
Query: 266 DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA-GLASVQHGKQ 324
D++ + + ++A + + + V +M+ G++P++ T S+LA C G+ G+Q
Sbjct: 201 DVVGYTSLVSALCRNGELARAVDVLCQMTR-QGLQPNEHTMTSMLAECPRGI-----GEQ 254
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
IH +++++ +Q V AL++ Y++ G + +F + +NVVSW +++
Sbjct: 255 IHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGR 314
Query: 385 GGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFT 444
AL++F +M + G++P+ F L+AC L + + + +++++ + DI
Sbjct: 315 LDDALRVFSEMISEGVQPNEFAFSIALSACGSVCLGR--QIHCSAIKRD--LMTDIRVSN 370
Query: 445 CLIDLLGRAGKLLEAE 460
L+ + GR+G + E E
Sbjct: 371 ALLSMYGRSGFVSELE 386
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 5/176 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS L C+ L QG LH LK+G V N ++N+Y+KCG++ AR FD M
Sbjct: 434 AFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVM 493
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+++SW+++I G Q G+ LALE FS+M P++ F S + C + +G+
Sbjct: 494 DTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGE 553
Query: 121 Q-IHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIA 174
+ ++G +I M + G ++AL ++ FEP+++ + L+A
Sbjct: 554 TFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLA 609
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 194/535 (36%), Positives = 287/535 (53%), Gaps = 6/535 (1%)
Query: 46 LYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYI 102
+Y+K AR V RN+VSW+++ISG Q G AL F +M ++PN++
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
F A A A ++ V G+QIHA ++K G FVG S MY K DA ++ E
Sbjct: 61 FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
E NL ++NA I+ V + +P + E F R P+ +F L CS L GM
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 180
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
LH L ++ +++ V N ++ Y K I +E F + K+ +SW + +AA +
Sbjct: 181 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 240
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
EK SV S V DF +S+L+ACAG+A ++ G+ IHAH ++ + + + VG+
Sbjct: 241 DEKA-SVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGS 299
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM--KATGI 400
ALV+MY KCG I S + F+EM +N+V+ N++I +A+ AL LFE+M + G
Sbjct: 300 ALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGP 359
Query: 401 KPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
P+ +TF+ LL+AC+ AG V+ G F+SM TYGI P EH++C++D+LGRAG + A
Sbjct: 360 TPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAY 419
Query: 461 EYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDG 520
E+ KK P+ V G L +ACR+ +G A+ LF L P + +VLLSN +A+ G
Sbjct: 420 EFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAG 479
Query: 521 MWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
W + R+ LK G+KK YS I V+ F + SH EI L L
Sbjct: 480 RWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKL 534
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 187/378 (49%), Gaps = 17/378 (4%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G +HA +K G DV V ++Y K ARK+FDE+ ERNL +W+A IS
Sbjct: 77 GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVT 136
Query: 81 AGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
G A+E F + + PN F + ++AC+ L G Q+H L+ G+ + V
Sbjct: 137 DGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV 196
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
N LI Y K + +++ E N VS+ +L+A +V+N + EK V L R+ +
Sbjct: 197 CNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKA-SVLYLRSRKDI 255
Query: 198 L-PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
+ F + L C+ L G +H VK +E FVG+ ++ +Y K I ++E
Sbjct: 256 VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSE 315
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS-NDHGVRPDDFTFASILAACAG 315
+AF + EK+L++ N+ I +H + L++F+EM+ G P+ TF S+L+AC+
Sbjct: 316 QAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSR 375
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVG----NALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
+V++G +I MR + G + +V+M + G++ +Y+ +M + +S
Sbjct: 376 AGAVENGMKI---FDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTIS 432
Query: 372 -WNTIIAA---HANHRLG 385
W + A H +LG
Sbjct: 433 VWGALQNACRMHGKPQLG 450
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 118/223 (52%), Gaps = 5/223 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + L+ CS L G+ LH VL+ G DV V N +++ Y KC ++ + +F EM
Sbjct: 161 TFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM 220
Query: 64 SERNLVSWSAMISGHHQAGEHLLA--LEFFSQMHLL-PNEYIFASAISACAGIQSLVKGQ 120
+N VSW ++++ + Q E A L S+ ++ ++++ +S +SACAG+ L G+
Sbjct: 221 GTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGR 280
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IHA+++K FVG++L+ MY K G D+ + E E NLV+ N+LI G+
Sbjct: 281 SIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQG 340
Query: 181 QPEKGFEVFKLMLRQGL--LPDRFSFAGGLEICSVSNDLRKGM 221
Q + +F+ M +G P+ +F L CS + + GM
Sbjct: 341 QVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGM 383
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 70/123 (56%), Gaps = 5/123 (4%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
ISS+L C+ L+ G S+HA +K ++ + V + ++++Y KCG + + + FDEM
Sbjct: 263 ISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP 322
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMH-----LLPNEYIFASAISACAGIQSLVKG 119
E+NLV+ +++I G+ G+ +AL F +M PN F S +SAC+ ++ G
Sbjct: 323 EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENG 382
Query: 120 QQI 122
+I
Sbjct: 383 MKI 385
>gi|302769798|ref|XP_002968318.1| hypothetical protein SELMODRAFT_599 [Selaginella moellendorffii]
gi|300163962|gb|EFJ30572.1| hypothetical protein SELMODRAFT_599 [Selaginella moellendorffii]
Length = 666
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 181/553 (32%), Positives = 301/553 (54%), Gaps = 43/553 (7%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGI-QPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+++ C AL+ G + A V + G+ DV++ N ++N+Y+KCG + A VF+ M
Sbjct: 113 AVVSACCDPSALEAGDKIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKI 172
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHL----------LPNEYIFASAISACAGIQS 115
R++VSW+A+IS + +A++ F +M L LP+ + ASA++AC G +
Sbjct: 173 RDVVSWNAIISALARHDRKDIAMQRFREMQLEGLSPKEEALLPDGFTLASALAACTGPEM 232
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
L +G++IHA ++ G S VGN+L+SMY G DAL + + + N+VS+NA+IA
Sbjct: 233 LEEGREIHALVIERGCESELVVGNALVSMYANCGTLQDALECFQKMAQRNVVSWNAMIAA 292
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+V + ++ F +F M +G+ P+ +F L CS G+ LH + + LE++
Sbjct: 293 YVHHNCDKEAFRIFHQMQLEGVQPNSVTFVTFLSACSTPAAFEDGLQLHSIVRESGLEAD 352
Query: 236 PFVGNTIMALYSK-------------------------------FNLIGEAEKAFRLIEE 264
VGN ++ +++K + EA K F ++EE
Sbjct: 353 ASVGNAVVHMFAKCWSLDDALAAFQRIPQKNLGSWNGLLGAYIHVGRLAEARKLFEVMEE 412
Query: 265 KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ 324
+D+I+WN + A ++ + +F+ M + G + + T+ ++L ACAG A + G++
Sbjct: 413 RDVITWNMILGAYVEREMAKEAVRLFRRMIAE-GTKSNSITWTTMLGACAGEALLAEGRR 471
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
IH + + ++ VGNALV+M+ KC + + + F + ++ SWN ++AA A +
Sbjct: 472 IHELIGERGADSELFVGNALVDMFGKCASLGGARQAFERIRGKDASSWNVLVAALAQNGD 531
Query: 385 GGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFT 444
ALK F QM+ GIKP VTFI + AC+HAG +++ + F S+ YGI+P H++
Sbjct: 532 AEEALKQFLQMQREGIKPTDVTFIVVFWACSHAGRLEQAKTIFASLRHDYGIAPLPSHYS 591
Query: 445 CLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPT 504
+ DLLGRAG L EAEE K+ P QD + TLLSAC++ DV G ++A Q+ P
Sbjct: 592 GMTDLLGRAGFLDEAEEVIKRIPFSQDELPWMTLLSACKVHGDVERGRKVAGQVLRWNPG 651
Query: 505 TTSPYVLLSNLYA 517
++ V LSN++A
Sbjct: 652 DSAARVALSNIFA 664
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 156/548 (28%), Positives = 271/548 (49%), Gaps = 49/548 (8%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S + L C + ++L G +H V++ G+ + V N ++N+Y KCG + LAR+VFD M
Sbjct: 8 SFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALAREVFDGM 67
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKG 119
R+++SW+A+I+ + QAG A+E F M + P+ F + +SAC +L G
Sbjct: 68 DHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACCDPSALEAG 127
Query: 120 QQIHAYSLKFGYASISFV-GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+I A + G V GN+L++MY K G A +V+ ++VS+NA+I+
Sbjct: 128 DKIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDVVSWNAIISALAR 187
Query: 179 NQQPEKGFEVFKLMLRQG-------LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK 231
+ + + + F+ M +G LLPD F+ A L C+ L +G +H L ++
Sbjct: 188 HDRKDIAMQRFREMQLEGLSPKEEALLPDGFTLASALAACTGPEMLEEGREIHALVIERG 247
Query: 232 LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK 291
ES VGN ++++Y+ + +A + F+ + +++++SWN IAA H ++ +F
Sbjct: 248 CESELVVGNALVSMYANCGTLQDALECFQKMAQRNVVSWNAMIAAYVHHNCDKEAFRIFH 307
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
+M + GV+P+ TF + L+AC+ A+ + G Q+H+ + L D VGNA+V+M+AKC
Sbjct: 308 QMQLE-GVQPNSVTFVTFLSACSTPAAFEDGLQLHSIVRESGLEADASVGNAVVHMFAKC 366
Query: 352 -------------------------------GLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G ++ + KLF M R+V++WN I+ A+
Sbjct: 367 WSLDDALAAFQRIPQKNLGSWNGLLGAYIHVGRLAEARKLFEVMEERDVITWNMILGAYV 426
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
+ A++LF +M A G K +S+T+ +L AC L+ EG + + G ++
Sbjct: 427 EREMAKEAVRLFRRMIAEGTKSNSITWTTMLGACAGEALLAEGR-RIHELIGERGADSEL 485
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH 500
L+D+ G+ L A + ++ G+D L++A D E KQ
Sbjct: 486 FVGNALVDMFGKCASLGGARQAFERIR-GKDASSWNVLVAALAQNGD---AEEALKQFLQ 541
Query: 501 LQPTTTSP 508
+Q P
Sbjct: 542 MQREGIKP 549
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 123/400 (30%), Positives = 211/400 (52%), Gaps = 12/400 (3%)
Query: 96 LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL 155
LLP+ F +A+ +C IQSL G+ IH ++ G + VGN+L++MY K G + A
Sbjct: 2 LLPDNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALAR 61
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL-PDRFSFAGGLEICSVS 214
V+ +++S+NA+I + + ++ E+F+ M G + PD +F + C
Sbjct: 62 EVFDGMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACCDP 121
Query: 215 NDLRKG-MILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTF 273
+ L G I + + L+S+ +GN ++ +YSK + A F ++ +D++SWN
Sbjct: 122 SALEAGDKIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDVVSWNAI 181
Query: 274 IAACSHCADYEKGLSVFKEMS------NDHGVRPDDFTFASILAACAGLASVQHGKQIHA 327
I+A + + + F+EM + + PD FT AS LAAC G ++ G++IHA
Sbjct: 182 ISALARHDRKDIAMQRFREMQLEGLSPKEEALLPDGFTLASALAACTGPEMLEEGREIHA 241
Query: 328 HLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGS 387
+I ++ VGNALV+MYA CG + + + F +M RNVVSWN +IAA+ +H
Sbjct: 242 LVIERGCESELVVGNALVSMYANCGTLQDALECFQKMAQRNVVSWNAMIAAYVHHNCDKE 301
Query: 388 ALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLI 447
A ++F QM+ G++P+SVTF+ L+AC+ ++G +S+ + G+ D ++
Sbjct: 302 AFRIFHQMQLEGVQPNSVTFVTFLSACSTPAAFEDG-LQLHSIVRESGLEADASVGNAVV 360
Query: 448 DLLGRAGKLLEAEEYTKKFP---LGQDPIVLGTLLSACRL 484
+ + L +A ++ P LG +LG + RL
Sbjct: 361 HMFAKCWSLDDALAAFQRIPQKNLGSWNGLLGAYIHVGRL 400
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 180/362 (49%), Gaps = 23/362 (6%)
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
GLLPD SF L+ C L G +H L ++ L + VGN ++ +Y K + A
Sbjct: 1 GLLPDNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALA 60
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
+ F ++ +D+ISWN I A + ++ + +F+ M D + PD TF ++++AC
Sbjct: 61 REVFDGMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACCD 120
Query: 316 LASVQHGKQIHAHLIRMR--LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
++++ G +I A L+ R L+ DV +GNALVNMY+KCG + + +F M R+VVSWN
Sbjct: 121 PSALEAGDKIFA-LVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDVVSWN 179
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIK-------PDSVTFIGLLTACNHAGLVKEGEAY 426
II+A A H A++ F +M+ G+ PD T L AC +++EG
Sbjct: 180 AIISALARHDRKDIAMQRFREMQLEGLSPKEEALLPDGFTLASALAACTGPEMLEEGRE- 238
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRR 486
+++ G ++ L+ + G L +A E +K + Q +V + A +
Sbjct: 239 IHALVIERGCESELVVGNALVSMYANCGTLQDALECFQK--MAQRNVVSWNAMIAAYVHH 296
Query: 487 DVVIGERLAKQLFH------LQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
+ ++ A ++FH +QP + + LS ++ + D ++++SGL+ +
Sbjct: 297 NC---DKEAFRIFHQMQLEGVQPNSVTFVTFLSAC-STPAAFEDGLQLHSIVRESGLEAD 352
Query: 541 PS 542
S
Sbjct: 353 AS 354
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 93/195 (47%), Gaps = 7/195 (3%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+++L C+ L +G +H + + G ++ V N +++++ KC + AR+ F+ +
Sbjct: 454 TTMLGACAGEALLAEGRRIHELIGERGADSELFVGNALVDMFGKCASLGGARQAFERIRG 513
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
++ SW+ +++ Q G+ AL+ F QM + P + F AC+ L + + I
Sbjct: 514 KDASSWNVLVAALAQNGDAEEALKQFLQMQREGIKPTDVTFIVVFWACSHAGRLEQAKTI 573
Query: 123 HAYSLK--FGYASISFVGNSLISMYMKVGYSSDALLVYGE-AFEPNLVSFNALIAGFVEN 179
A SL+ +G A + + + + + G+ +A V F + + + L++ +
Sbjct: 574 FA-SLRHDYGIAPLPSHYSGMTDLLGRAGFLDEAEEVIKRIPFSQDELPWMTLLSACKVH 632
Query: 180 QQPEKGFEVFKLMLR 194
E+G +V +LR
Sbjct: 633 GDVERGRKVAGQVLR 647
>gi|242051244|ref|XP_002463366.1| hypothetical protein SORBIDRAFT_02g042450 [Sorghum bicolor]
gi|241926743|gb|EER99887.1| hypothetical protein SORBIDRAFT_02g042450 [Sorghum bicolor]
Length = 745
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 181/557 (32%), Positives = 294/557 (52%), Gaps = 19/557 (3%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
LHA + GI DV V N ++ Y++ G M ARKVF+EM R+LVSW+A++ G Q GE
Sbjct: 170 LHALASRAGIATDVFVGNALVTAYSRGGLMDAARKVFEEMPARDLVSWNALVCGLAQDGE 229
Query: 84 H-----LLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVG 138
+ L Q + P+ S I AC L G+QIH +++K G +
Sbjct: 230 CSAEVIRVFLRMLKQGDVRPDRISVCSVIPACGAEGKLELGRQIHGFAVKLGVEGHVSIA 289
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL 198
N L++MY K G A ++ E +++S+ ++ + E +F M R G+
Sbjct: 290 NVLVAMYYKCGTPGCARRLFEFMGERDVISWTTVM-----SMDGEDAVSLFNGMRRDGVA 344
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKA 258
P+ +F L R+G ++H + +K L N+++ +Y+K + +A
Sbjct: 345 PNEVTFVAMLSSMPGDCPAREGQMIHAVCLKTSLSDKAAAANSLITMYAKLRRMDDARMI 404
Query: 259 FRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
F L+ ++I+WN I+ + + L F M ++P++ TFASIL+A + +
Sbjct: 405 FSLMPHSEIIAWNALISGYAQNEMCQDALEAFLAMMKI--MKPNETTFASILSAVTAVET 462
Query: 319 VQ--HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
V +G+ H +++ L V AL++MYAK G + S+K F E +HR++++W II
Sbjct: 463 VSMAYGQMYHCQALKLGLGASEYVSGALIDMYAKRGSLEESWKAFGETVHRSLIAWTAII 522
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
+A++ H + + LF M +G+ PD V + +LTAC ++G V G F+SM +G
Sbjct: 523 SANSKHGNYDAVVSLFNDMVGSGVAPDGVVLLSVLTACRYSGFVSLGREIFDSMAAKHGA 582
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAK 496
EH+ C++D+LGRAG+L EAEE + P G L +LL ACR+ + +GER+A
Sbjct: 583 ELWPEHYACVVDMLGRAGRLEEAEELMLQMPSGPSVSALQSLLGACRIHGNTDVGERVAS 642
Query: 497 QLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFE--- 553
L +PT + YVLLSN+YA G WG VA R+ +++ G+KKE +S ++ G +
Sbjct: 643 VLTETEPTESGAYVLLSNIYAEKGDWGAVARVRRQMRERGVKKEVGFSWVDAGGAGDSLH 702
Query: 554 --KFTVAEFSHSKIGEI 568
KF+ + +H + EI
Sbjct: 703 LYKFSSDDTTHPQSEEI 719
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/453 (28%), Positives = 219/453 (48%), Gaps = 24/453 (5%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
+ HA + G+ V+N + YAK A +VF R+ S++ ++S
Sbjct: 70 AFHALAVASGLAAFAPVTNSLAARYAKGNSFPAAARVFAAARSRDTRSYNTILSATPDPD 129
Query: 83 EHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVG 138
+ AL F ++M + P+ F +S AG +Q+HA + + G A+ FVG
Sbjct: 130 D---ALAFAARMLRTGDVRPDAVTFTVTLSLAAGRGEAHLVRQLHALASRAGIATDVFVG 186
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ-PEKGFEVFKLMLRQG- 196
N+L++ Y + G A V+ E +LVS+NAL+ G ++ + + VF ML+QG
Sbjct: 187 NALVTAYSRGGLMDAARKVFEEMPARDLVSWNALVCGLAQDGECSAEVIRVFLRMLKQGD 246
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
+ PDR S + C L G +H VK +E + + N ++A+Y K G A
Sbjct: 247 VRPDRISVCSVIPACGAEGKLELGRQIHGFAVKLGVEGHVSIANVLVAMYYKCGTPGCAR 306
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
+ F + E+D+ISW T ++ D E +S+F M D GV P++ TF ++L++ G
Sbjct: 307 RLFEFMGERDVISWTTVMS-----MDGEDAVSLFNGMRRD-GVAPNEVTFVAMLSSMPGD 360
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
+ G+ IHA ++ L+ N+L+ MYAK + + +F+ M H +++WN +I
Sbjct: 361 CPAREGQMIHAVCLKTSLSDKAAAANSLITMYAKLRRMDDARMIFSLMPHSEIIAWNALI 420
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK--EGEAYF-NSMEKT 433
+ +A + + AL+ F M +KP+ TF +L+A V G+ Y +++
Sbjct: 421 SGYAQNEMCQDALEAFLAMMKI-MKPNETTFASILSAVTAVETVSMAYGQMYHCQALKLG 479
Query: 434 YGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
G S + LID+ + G L EE K F
Sbjct: 480 LGASEYVS--GALIDMYAKRGSL---EESWKAF 507
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 172/327 (52%), Gaps = 12/327 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+ S++ C L+ G +H +K+G++ V ++N ++ +Y KCG AR++F+ M
Sbjct: 253 SVCSVIPACGAEGKLELGRQIHGFAVKLGVEGHVSIANVLVAMYYKCGTPGCARRLFEFM 312
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
ER+++SW+ ++S GE A+ F+ M + PNE F + +S+ G +GQ
Sbjct: 313 GERDVISWTTVMS---MDGED--AVSLFNGMRRDGVAPNEVTFVAMLSSMPGDCPAREGQ 367
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IHA LK + + NSLI+MY K+ DA +++ ++++NALI+G+ +N+
Sbjct: 368 MIHAVCLKTSLSDKAAAANSLITMYAKLRRMDDARMIFSLMPHSEIIAWNALISGYAQNE 427
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSV--SNDLRKGMILHCLTVKCKLESNPFV 238
+ E F M++ + P+ +FA L + + + G + HC +K L ++ +V
Sbjct: 428 MCQDALEAFLAMMKI-MKPNETTFASILSAVTAVETVSMAYGQMYHCQALKLGLGASEYV 486
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++ +Y+K + E+ KAF + LI+W I+A S +Y+ +S+F +M G
Sbjct: 487 SGALIDMYAKRGSLEESWKAFGETVHRSLIAWTAIISANSKHGNYDAVVSLFNDMVGS-G 545
Query: 299 VRPDDFTFASILAACAGLASVQHGKQI 325
V PD S+L AC V G++I
Sbjct: 546 VAPDGVVLLSVLTACRYSGFVSLGREI 572
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 116/258 (44%), Gaps = 18/258 (6%)
Query: 176 FVENQQPEKGFEVFKLMLRQGLL-------PDRFSFAGGLEICSVSNDLRKGMILHCLTV 228
F E P + V L +GLL P FS A + D H L V
Sbjct: 23 FAETAHPPRASAVTPLAALRGLLQAGLPLSPTAFSAA----VARSGPDALPA--FHALAV 76
Query: 229 KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLS 288
L + V N++ A Y+K N A + F +D S+NT ++A D + L+
Sbjct: 77 ASGLAAFAPVTNSLAARYAKGNSFPAAARVFAAARSRDTRSYNTILSATP---DPDDALA 133
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMY 348
M VRPD TF L+ AG +Q+HA R + DV VGNALV Y
Sbjct: 134 FAARMLRTGDVRPDAVTFTVTLSLAAGRGEAHLVRQLHALASRAGIATDVFVGNALVTAY 193
Query: 349 AKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA-NHRLGGSALKLFEQMKATG-IKPDSVT 406
++ GL+ + K+F EM R++VSWN ++ A + +++F +M G ++PD ++
Sbjct: 194 SRGGLMDAARKVFEEMPARDLVSWNALVCGLAQDGECSAEVIRVFLRMLKQGDVRPDRIS 253
Query: 407 FIGLLTACNHAGLVKEGE 424
++ AC G ++ G
Sbjct: 254 VCSVIPACGAEGKLELGR 271
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 177/537 (32%), Positives = 285/537 (53%), Gaps = 35/537 (6%)
Query: 71 WSAMISGHHQAGEHLLALEFFSQMHLLPNE---YIFASAISACAGIQSLVKGQQIHAYSL 127
W+ +I+ + + + AL ++Q+ + E ++ S + AC + G++IH + L
Sbjct: 92 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151
Query: 128 KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE 187
K G FVGN+L+ MY + A LV+ + E ++VS++ +I N++ + E
Sbjct: 152 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALE 211
Query: 188 VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT--IMAL 245
+ + M + P + + + + + ++R G +H ++ + V T ++ +
Sbjct: 212 LIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDM 271
Query: 246 YSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH-------- 297
Y+K +G A + F + +K ++SW IA C E+ ++F N
Sbjct: 272 YAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAML 331
Query: 298 ----------------------GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN 335
GVRP T S+L+ CA ++ GK +H+++ + R+
Sbjct: 332 SAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVE 391
Query: 336 QDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM 395
D + ALV+MYAKCG I+ + +LF E + R++ WN II A H G AL +F +M
Sbjct: 392 VDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEM 451
Query: 396 KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGK 455
+ G+KP+ +TFIGLL AC+HAGLV EG+ F M T+G+ P IEH+ C++DLLGRAG
Sbjct: 452 ERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGL 511
Query: 456 LLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNL 515
L EA E K P+ + IV G L++ACRL ++ +GE A QL ++P VL+SN+
Sbjct: 512 LDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNI 571
Query: 516 YASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYML 572
YA+ W D AG RK +K G+KKEP +S+IEV GT +F + + SH +I IN ML
Sbjct: 572 YAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEML 628
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 217/482 (45%), Gaps = 57/482 (11%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C + Q G +H VLK G+ DV V N ++ +Y +C + AR VFD+M ER
Sbjct: 129 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 188
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIH 123
++VSWS MI + E +ALE +M+ + P+E S ++ A ++ G+ +H
Sbjct: 189 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 248
Query: 124 AYSLK------FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
AY ++ G + + +L+ MY K G+ A ++ + +VS+ A+IAG +
Sbjct: 249 AYVIRNSNNEHMGVPTTT----ALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCI 304
Query: 178 ENQQPE-------------------------------KGFEVFKLMLRQGLLPDRFSFAG 206
+ + E + F +F M G+ P + +
Sbjct: 305 RSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVS 364
Query: 207 GLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKD 266
L +C+V+ L G +H K ++E + + ++ +Y+K I A + F +D
Sbjct: 365 LLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRD 424
Query: 267 LISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
+ WN I + E+ L +F EM GV+P+D TF +L AC+ V GK++
Sbjct: 425 ICMWNAIITGFAMHGYGEEALDIFAEMER-QGVKPNDITFIGLLHACSHAGLVTEGKKLF 483
Query: 327 AHLIR-MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAA---HAN 381
++ L + +V++ + GL+ ++++ M + N + W ++AA H N
Sbjct: 484 EKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKN 543
Query: 382 HRLGG-SALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
+LG +A +L E I+P++ + L++ A A KT G+ +
Sbjct: 544 PQLGELAATQLLE------IEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEP 597
Query: 441 EH 442
H
Sbjct: 598 GH 599
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 97/191 (50%), Gaps = 13/191 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I SLL C+ AL G +H+ + K ++ D I++ ++++YAKCG + A ++F E
Sbjct: 361 TIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEA 420
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
R++ W+A+I+G G AL+ F++M + PN+ F + AC+ + +G+
Sbjct: 421 ISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGK 480
Query: 121 Q-----IHAYSLKFGYASISFVGNSLISMYMKVGYSSDA-LLVYGEAFEPNLVSFNALIA 174
+ +H + L I G ++ + + G +A ++ +PN + + AL+A
Sbjct: 481 KLFEKMVHTFGL---VPQIEHYG-CMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVA 536
Query: 175 GFVENQQPEKG 185
++ P+ G
Sbjct: 537 ACRLHKNPQLG 547
>gi|302799994|ref|XP_002981755.1| hypothetical protein SELMODRAFT_115083 [Selaginella moellendorffii]
gi|300150587|gb|EFJ17237.1| hypothetical protein SELMODRAFT_115083 [Selaginella moellendorffii]
Length = 673
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 180/583 (30%), Positives = 309/583 (53%), Gaps = 14/583 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS-E 65
SL+ C+ +L+ G S+HA +L+ G + + N ++ +Y KC + A VF+ ++ E
Sbjct: 15 SLIRRCANPHSLEAGRSIHAHILRHGYGGERFLLNSLVEMYCKCDSLRDATAVFELVARE 74
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
R W+ +I+ + Q G+ ++ + +M + PN S + ACA ++ L G++I
Sbjct: 75 RIAFPWNILIAANAQRGQSRESIALYRRMSCEGVKPNAITLVSVLGACANLEDLKTGREI 134
Query: 123 HAYSLKFGYASI--------SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIA 174
H + G + + + +L++MY + G +DA V+ +L ++NA++A
Sbjct: 135 HRSHVLGGRSRPYERPMPVDAVMATALVTMYGRCGSVADARAVFEGICGRDLAAWNAMVA 194
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
+ N Q + V + M +G+ P +F G L C L + +H + LES
Sbjct: 195 AYSRNGQMAQAVLVLRRMAVEGVRPGEGTFVGMLSWCCTVGALDEARSIHAHILATGLES 254
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
P VG T++++Y + +G A AF+ I +KD+++WN IAA + + ++ M
Sbjct: 255 RPTVGTTLVSMYGRCGSLGGAVCAFQRIRDKDIVAWNAMIAAYAQSGHSRDSIRIYHVMD 314
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
+ GVR D T +L AC+ LA + +HA ++ + DV +G ALVN YA+ G +
Sbjct: 315 LE-GVRVDKVTLIGVLDACSSLALTSKTRLVHARIVDTGVELDVVLGTALVNAYARGGHL 373
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ +F EM RNV +W+ ++AA+A +L+++ +M+ G++P+ +T++ +L AC
Sbjct: 374 VDADLVFAEMEERNVATWSAMVAAYAQTGHPDRSLEMYREMQLQGLRPNYITYVSILFAC 433
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
NHAGL+ G YF SM + YGI EH +C++DLLGR+G+L EAE P
Sbjct: 434 NHAGLLDHGLDYFASMGRDYGIESCEEHCSCIVDLLGRSGRLDEAEALMASVPYRLGISA 493
Query: 475 LGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKD 534
LL ACR DV G R+A++ F ++ +PYV LSN+YA GMW +V+ R+++ +
Sbjct: 494 WMCLLGACRTHGDVERGARVARRAFQVESGEVAPYVALSNMYAGHGMWDEVSRVRQLMAN 553
Query: 535 SGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
+ L K S +E+ G +F + +H + I + L L
Sbjct: 554 T-LDKSTGKSFVEIDGRLHEFIQGDETHPEKDSIQAKILELEL 595
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 180/368 (48%), Gaps = 11/368 (2%)
Query: 102 IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG-E 160
++ S I CA SL G+ IHA+ L+ GY F+ NSL+ MY K DA V+
Sbjct: 12 LYESLIRRCANPHSLEAGRSIHAHILRHGYGGERFLLNSLVEMYCKCDSLRDATAVFELV 71
Query: 161 AFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKG 220
A E +N LIA + Q + +++ M +G+ P+ + L C+ DL+ G
Sbjct: 72 ARERIAFPWNILIAANAQRGQSRESIALYRRMSCEGVKPNAITLVSVLGACANLEDLKTG 131
Query: 221 MIL---HCLTVKCKLESNPFVGNTIMA-----LYSKFNLIGEAEKAFRLIEEKDLISWNT 272
+ H L + + P + +MA +Y + + +A F I +DL +WN
Sbjct: 132 REIHRSHVLGGRSRPYERPMPVDAVMATALVTMYGRCGSVADARAVFEGICGRDLAAWNA 191
Query: 273 FIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
+AA S + + V + M+ + GVRP + TF +L+ C + ++ + IHAH++
Sbjct: 192 MVAAYSRNGQMAQAVLVLRRMAVE-GVRPGEGTFVGMLSWCCTVGALDEARSIHAHILAT 250
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
L VG LV+MY +CG + + F + +++V+WN +IAA+A +++++
Sbjct: 251 GLESRPTVGTTLVSMYGRCGSLGGAVCAFQRIRDKDIVAWNAMIAAYAQSGHSRDSIRIY 310
Query: 393 EQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
M G++ D VT IG+L AC+ L + + T G+ D+ T L++ R
Sbjct: 311 HVMDLEGVRVDKVTLIGVLDACSSLALTSKTRLVHARIVDT-GVELDVVLGTALVNAYAR 369
Query: 453 AGKLLEAE 460
G L++A+
Sbjct: 370 GGHLVDAD 377
>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 178/568 (31%), Positives = 310/568 (54%), Gaps = 8/568 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVL---KMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
++ LL C+ + L+ G S+HA ++ + D N ++NLY KC + + ARK+FD
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL----LPNEYIFASAISACAGIQSLV 117
M ERN+VSW AM+ G+ +G L+ F M PNE++ +C+ +
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+G+Q H LK+G S FV N+L+ MY + +A+ V + +L F++ ++G++
Sbjct: 154 EGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYL 213
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
E ++G +V + + + + ++ L + S DL + +H V+ +
Sbjct: 214 ECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVE 273
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
++ +Y K + A++ F +++ T + A +E+ L++F +M
Sbjct: 274 ACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKE 333
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
V P+++TFA +L + A L+ ++ G +H +++ V VGNALVNMYAK G I +
Sbjct: 334 -VPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDA 392
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
K F+ M R++V+WNT+I+ ++H LG AL+ F++M TG P+ +TFIG+L AC+H
Sbjct: 393 RKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHI 452
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
G V++G YFN + K + + PDI+H+TC++ LL +AG +AE++ + P+ D + T
Sbjct: 453 GFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRT 512
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL+AC +RR+ +G+++A+ P + YVLLSN++A W VA R ++ + G+
Sbjct: 513 LLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGV 572
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKI 565
KKEP S I ++ F + H +I
Sbjct: 573 KKEPGVSWIGIRNQTHVFLAEDNQHPEI 600
>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
Length = 673
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 176/545 (32%), Positives = 294/545 (53%), Gaps = 5/545 (0%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+S L C ++ + G LH V+K G D V N ++++YAK G + ARKVFD +
Sbjct: 126 LSLALKACVRSADFRYGRRLHCDVVKAG-GADGFVMNSLVDMYAKAGDLENARKVFDRVP 184
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
ERN+VSW++M+SG Q G L F++M ++ P+EY S ++ACA + L +G+
Sbjct: 185 ERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQGRW 244
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
IH +K+G ++ SF+ SL+ MY K DA V+ E ++V + A+I G+ +N++
Sbjct: 245 IHGSVIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQNKR 304
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
P ++F ++P+ + A + + L G +H + VK + V N
Sbjct: 305 PLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNA 364
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y+K + EA F I KD+++WN+ +A S + L +F M G+ P
Sbjct: 365 LVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRM-QGISP 423
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D + + L+AC LA + GK H + I+ ++ V AL+N+Y+KC + + ++F
Sbjct: 424 DAISVVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVF 483
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
N+M RN V+W+ +I + ++ LF +M I P+ V F +L+AC+H G+V
Sbjct: 484 NDMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVT 543
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
G+ YF+SM + + I+P ++H+ C++D++ RAG L EA E+ + P+ V G+ L
Sbjct: 544 AGKEYFDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLHG 603
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
C+L + GE K++ L P T YVL+SNLY S G W R+ +++ GL K P
Sbjct: 604 CKLHSRLEFGEEAIKKMAALHPETPDFYVLMSNLYTSYGRWDKSQTIRRWMQEQGLVKLP 663
Query: 542 SYSMI 546
S +
Sbjct: 664 GCSSV 668
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 152/317 (47%), Gaps = 15/317 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I++++ ++ + L G S+HA +K+G +V N ++++YAKC + A +F +
Sbjct: 326 TIATVISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDMYAKCQALPEANSIFGRI 385
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
+++V+W++M++G+ + G +L F++M + P+ +A+SAC + L G+
Sbjct: 386 LIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCLADLHIGK 445
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
H Y++K+ + S +V +L+++Y K A V+ + + N V+++A+I G+
Sbjct: 446 GFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTWSAMIGGYGMQG 505
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
++F ML++ + P+ F L CS GM+ + + +
Sbjct: 506 DSAGSIDLFNEMLKENIHPNEVVFTSILSACS-----HTGMVTAGKEYFDSMARHFNITP 560
Query: 241 TIMALYSKFNLIGEA---EKAFRLIEEKDLIS----WNTFIAACSHCADYEKGLSVFKEM 293
++ +++ A E+A I+ + + W +F+ C + E G K+M
Sbjct: 561 SMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLHGCKLHSRLEFGEEAIKKM 620
Query: 294 SNDHGVRPDDFTFASIL 310
+ H PD + S L
Sbjct: 621 AALHPETPDFYVLMSNL 637
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A S+ + L C L G H +K ++ V+ +LNLY+KC + A++VF+
Sbjct: 425 AISVVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFN 484
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
+M++RN V+WSAMI G+ G+ +++ F++M ++ PNE +F S +SAC+ +
Sbjct: 485 DMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVTA 544
Query: 119 GQQ 121
G++
Sbjct: 545 GKE 547
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 82/159 (51%), Gaps = 2/159 (1%)
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
D + L AC A ++G+++H +++ D V N+LV+MYAK G + + K+F+
Sbjct: 123 DVVLSLALKACVRSADFRYGRRLHCDVVKAG-GADGFVMNSLVDMYAKAGDLENARKVFD 181
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+ RNVVSW ++++ + + L LF +M+ + P T + +L AC G + +
Sbjct: 182 RVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQ 241
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
G S+ K YG+S + L+D+ + K+ +A
Sbjct: 242 GRWIHGSVIK-YGLSTNSFISASLLDMYAKCEKVEDARR 279
>gi|326487167|dbj|BAJ89568.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 691
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 182/566 (32%), Positives = 308/566 (54%), Gaps = 13/566 (2%)
Query: 19 QQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGH 78
+ G +H+ ++ G D V + ++ LYA+CG A V M ++V++++++S
Sbjct: 114 RTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMESPDVVAYTSLVSAL 173
Query: 79 HQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLK-FGYASI 134
++GE +A E QM ++PNE+ S ++AC LV G QIH Y +K G++
Sbjct: 174 CRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACC---PLVLGVQIHGYMIKAMGFSQS 230
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
+ ++L+ Y + G A V+ N+V++ ++ + + +PE ++F M+
Sbjct: 231 VYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGRPEDALQLFDEMIS 290
Query: 195 QGLL-PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
+G++ P+ F+F+ L C + G LH L +K L S+ V N ++++Y + L+
Sbjct: 291 EGVVSPNEFAFSIALGAC---ESIALGSQLHSLAIKHGLASHLRVSNALLSMYGRIGLVQ 347
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
+ E FR IE+ D++SW I+A EK +++ M + G+ P+D+ F+S+L++C
Sbjct: 348 QLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRM-HSQGLTPNDYAFSSVLSSC 406
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
A LA + G+Q H +++ + GNAL+NMY+KCG I + F+ M HR+V SWN
Sbjct: 407 ADLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWN 466
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNS-MEK 432
++I HA H LK F +M + G +P+ T +G+L ACNHAGLV EG A+F S M
Sbjct: 467 SLIHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMAG 526
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGE 492
YG H+ C++D+LGR+G+ +A ++ P +V TLL++CRL ++ G
Sbjct: 527 LYGTFLTPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLASCRLHGNLETGR 586
Query: 493 RLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTF 552
A++L L ++ YVL+S ++A G W D R+ + ++G++KE S +EV+
Sbjct: 587 LAAEKLVELSDQDSASYVLMSGIHAMHGEWRDADMVRRRMDEAGVRKEAGRSWVEVRNEV 646
Query: 553 EKFTVAEFSHSKIGEINYMLKTLSLA 578
F + SH I ML LS A
Sbjct: 647 HTFVAQDVSHPDSPSIYRMLWELSDA 672
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 209/431 (48%), Gaps = 13/431 (3%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM- 94
+V+ L+ K G++ A +FD M +N+V+W++ +SG + G A E F+ M
Sbjct: 28 EVVRDCKRLDGLMKAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMV 87
Query: 95 --HLLPNEYIFASAISACAGIQSLV--KGQQIHAYSLKFGYASISFVGNSLISMYMKVGY 150
+ N++ +A++ACA G+Q+H+ +++ G+ ++VG+ L+ +Y + G
Sbjct: 88 ESGVALNDFACNAALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGS 147
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
+ A V P++V++ +L++ + + E M+ G++P+ + L
Sbjct: 148 TRAAEAVLARMESPDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAA 207
Query: 211 CSVSNDLRKGMILHCLTVKC-KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
C L G+ +H +K + + +T++ YS+ A+ F ++ K++++
Sbjct: 208 CC---PLVLGVQIHGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVT 264
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
W T + E L +F EM ++ V P++F F+ L AC S+ G Q+H+
Sbjct: 265 WCTMMQLHIRDGRPEDALQLFDEMISEGVVSPNEFAFSIALGAC---ESIALGSQLHSLA 321
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
I+ L + V NAL++MY + GL+ +F + ++VSW I+A+ + G A+
Sbjct: 322 IKHGLASHLRVSNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAI 381
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
L +M + G+ P+ F +L++C L+ +G F+ + G LI++
Sbjct: 382 ALLSRMHSQGLTPNDYAFSSVLSSCADLALLDQGR-QFHCLALKLGCDVKTCTGNALINM 440
Query: 450 LGRAGKLLEAE 460
+ G+++ A
Sbjct: 441 YSKCGQIVPAR 451
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 164/341 (48%), Gaps = 41/341 (12%)
Query: 16 KALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMI 75
+++ G LH+ +K G+ + VSN +L++Y + G + +F + + ++VSW+A I
Sbjct: 309 ESIALGSQLHSLAIKHGLASHLRVSNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAI 368
Query: 76 SGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYA 132
S + Q G A+ S+MH L PN+Y F+S +S+CA + L +G+Q H +LK G
Sbjct: 369 SAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLALLDQGRQFHCLALKLGCD 428
Query: 133 SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM 192
+ GN+LI+MY K G A L + ++ S+N+LI G ++ + + + F M
Sbjct: 429 VKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEM 488
Query: 193 LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF--- 249
G P+ + G L C+ + + +G+ F + + LY F
Sbjct: 489 CSNGGEPNESTLLGVLAACNHAGLVDEGV--------------AFFRSAMAGLYGTFLTP 534
Query: 250 -------NLIGEA---EKAFRLIE----EKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
+++G + + A LIE E ++ W T +A+C + E G ++
Sbjct: 535 PHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLASCRLHGNLETG-----RLAA 589
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
+ V D AS + +G+ ++ HG+ A ++R R+++
Sbjct: 590 EKLVELSDQDSASYVLM-SGIHAM-HGEWRDADMVRRRMDE 628
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 6/177 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+L C+ L QG H LK+G N ++N+Y+KCG+++ AR FD M
Sbjct: 398 AFSSVLSSCADLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIM 457
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
R++ SW+++I GH Q GE + L+ FS+M PNE ++AC + +G
Sbjct: 458 DHRDVTSWNSLIHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGV 517
Query: 121 QIHAYSLKFGYASISFVGN--SLISMYMKVGYSSDALLVYGE-AFEPNLVSFNALIA 174
++ Y + + ++ M + G DAL + E FEP ++ + L+A
Sbjct: 518 AFFRSAMAGLYGTFLTPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLA 574
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 193/589 (32%), Positives = 315/589 (53%), Gaps = 37/589 (6%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYA--KCGKMILARKVFDEMSERNLVSWSAMISGHHQA 81
LHA ++ G+ + + +++ A G + A+++FD++ + N ++++I G+ +
Sbjct: 7 LHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGYSNS 66
Query: 82 GEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVG 138
+ + A+ F +M L PNE+ + AC + + +H ++K G S+ FV
Sbjct: 67 DDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVFVQ 126
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL 198
N+LI++Y+ G A ++ + + LVS+N++I G+ ++ F +F+ M G+
Sbjct: 127 NALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIGGYAHMGNWKEAFLLFRKMREWGME 186
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKA 258
PD F+F L +CS S DL G +H ++ + V N ++ +Y+K + A+
Sbjct: 187 PDGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQAI 246
Query: 259 FRLIEEKDLISWNTFIAACSH---------------------------C----ADYEKGL 287
F +EK+++SW + I+A + C Y + L
Sbjct: 247 FDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREAL 306
Query: 288 SVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNM 347
+F +M N V PD+ T SILAAC+ L + GK+IH +++ + V + N+L++M
Sbjct: 307 DLFNKMRNSR-VVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDM 365
Query: 348 YAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTF 407
YAKCG + + +F EM +N+VSWN II A A H G A+KLFE+M+A G PD +T
Sbjct: 366 YAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITL 425
Query: 408 IGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
GLL+AC+H+GLV G YF+ M Y + +IEH+ C++DLLGR G L EA E + P
Sbjct: 426 TGLLSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMP 485
Query: 468 LGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAG 527
+ D +V G LL ACR+ +V IG+++ KQL L+P + YVL+SN+Y W DV
Sbjct: 486 MKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVKK 545
Query: 528 ARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
RK++ D G+KK + S IE+ G +F V + H I ML L+
Sbjct: 546 IRKLMIDRGIKKGRAISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQLT 594
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 202/455 (44%), Gaps = 68/455 (14%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ +L C A + + +H +K+GI V V N ++ +Y CG + ARK+FD++
Sbjct: 90 TLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDI 149
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+++ LVSW++MI G+ G A F +M + P+ + F + +S C+ + L G+
Sbjct: 150 TDKTLVSWNSMIGGYAHMGNWKEAFLLFRKMREWGMEPDGFTFVNLLSVCSQSRDLDLGR 209
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H G V N+L+ MY K G A ++ E N+VS+ ++I+ + ++
Sbjct: 210 YVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHG 269
Query: 181 QPEKGFEVFKLM---------------LRQG----------------LLPDRFSFAGGLE 209
E ++F M LR+G ++PD + L
Sbjct: 270 SIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILA 329
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
CS DL G +H + K + N+++ +Y+K + A F + K+L+S
Sbjct: 330 ACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVS 389
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
WN I A + + + +F+EM D G PD+ T +L+AC+ H+ L
Sbjct: 390 WNVIIGALALHGCGLEAIKLFEEMQAD-GTLPDEITLTGLLSACS-----------HSGL 437
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
+ M L + + G+I Y++ E+ H + ++ L G A+
Sbjct: 438 VDMGL-----------YYFDRMGVI---YRVPREIEH-----YACMVDLLGRGGLLGEAI 478
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+L +M +KPD V + LL AC G V+ G+
Sbjct: 479 ELIGRMP---MKPDVVVWGALLGACRIHGNVEIGK 510
>gi|297735121|emb|CBI17483.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 188/558 (33%), Positives = 303/558 (54%), Gaps = 19/558 (3%)
Query: 34 QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQ 93
Q D+ SN L K G + AR++FD+MS+++ +SW+ +ISG+ A + AL F
Sbjct: 53 QTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKN 112
Query: 94 MH----LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
M L + +I + A AC + G+ +H Y++K G + FVG++L+ MY K G
Sbjct: 113 MRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNG 172
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
+ V+ E N+VS+ A+I G V ++ F M R + D ++FA L+
Sbjct: 173 KIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALK 232
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE---KD 266
C+ S L G +H +K + + FV NT+ +Y+K G+ E L E+ +D
Sbjct: 233 ACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNK---CGKLEYGLTLFEKMSMRD 289
Query: 267 LISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
++SW T I E + F M + V P+++TFA++++ CA LA ++ G+Q+H
Sbjct: 290 VVSWTTIITTLVQMGQEECAVQAFIRM-RESDVSPNEYTFAAVISGCANLARIEWGEQLH 348
Query: 327 AHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGG 386
A ++ + L + V N+++ MYAKCG ++ S +F+EM R++VSW+TIIA ++
Sbjct: 349 ALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVS 408
Query: 387 SALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE---AYFNS--MEKT---YGISP 438
A +L M+ G KP +L+AC + +++ G+ AY S +E T Y ISP
Sbjct: 409 EAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMKYQISP 468
Query: 439 DIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQL 498
EH+ C+IDLL RAG+L +AE + P +D +V TLL ACR+ DV G R A+++
Sbjct: 469 SKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERI 528
Query: 499 FHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVA 558
L+P ++ L+N+YAS G W + A RK++K G+ KEP +S I+V+ F
Sbjct: 529 LQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAG 588
Query: 559 EFSHSKIGEINYMLKTLS 576
+ SH + +I ML L+
Sbjct: 589 DRSHPQGEDIYNMLDLLA 606
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 203/392 (51%), Gaps = 15/392 (3%)
Query: 5 ISSLLHH-CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
I SL H C + G LH +K G+ V V + +L++Y K GK+ R+VF EM
Sbjct: 125 ILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEM 184
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
RN+VSW+A+I+G +AG + AL +FS+M + + Y FA A+ ACA +L G+
Sbjct: 185 PMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGR 244
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+IHA ++K G+ SFV N+L +MY K G L ++ + ++VS+ +I V+
Sbjct: 245 EIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMG 304
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
Q E + F M + P+ ++FA + C+ + G LH L + L ++ V N
Sbjct: 305 QEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVEN 364
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+IM +Y+K + + F + +D++SW+T IA S + + M + G +
Sbjct: 365 SIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRME-GPK 423
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN---------ALVNMYAKC 351
P +F AS+L+AC +A ++HGKQ+HA+++ + L ++++ +
Sbjct: 424 PTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMKYQISPSKEHYGCMIDLLCRA 483
Query: 352 GLISCSYKLFNEM-LHRNVVSWNTIIAAHANH 382
G +S + + M HR+ V W+T++ A H
Sbjct: 484 GRLSDAEHMIEAMPFHRDDVVWSTLLRACRVH 515
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 76/130 (58%), Gaps = 3/130 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++++ C+ ++ G LHA +L +G+ + V N ++ +YAKCG++ + +F EM
Sbjct: 327 TFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEM 386
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+ R++VSWS +I+G+ Q G A E S M + P E+ AS +SAC + L G+
Sbjct: 387 TRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGK 446
Query: 121 QIHAYSLKFG 130
Q+HAY L G
Sbjct: 447 QLHAYVLSIG 456
>gi|326522859|dbj|BAJ88475.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 691
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 182/566 (32%), Positives = 308/566 (54%), Gaps = 13/566 (2%)
Query: 19 QQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGH 78
+ G +H+ ++ G D V + ++ LYA+CG A V M ++V++++++S
Sbjct: 114 RTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMESPDVVAYTSLVSAL 173
Query: 79 HQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLK-FGYASI 134
++GE +A E QM ++PNE+ S ++AC LV G QIH Y +K G++
Sbjct: 174 CRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACC---PLVLGVQIHGYMIKAMGFSQS 230
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
+ ++L+ Y + G A V+ N+V++ ++ + + +PE ++F M+
Sbjct: 231 VYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGRPEDALQLFDEMIS 290
Query: 195 QGLL-PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
+G++ P+ F+F+ L C + G LH L +K L S+ V N ++++Y + L+
Sbjct: 291 EGVVSPNEFAFSIALGAC---ESIALGSQLHSLAIKHGLASHLRVSNALLSMYGRIGLVQ 347
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
+ E FR IE+ D++SW I+A EK +++ M + G+ P+D+ F+S+L++C
Sbjct: 348 QLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRM-HSQGLTPNDYAFSSVLSSC 406
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
A LA + G+Q H +++ + GNAL+NMY+KCG I + F+ M HR+V SWN
Sbjct: 407 ADLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWN 466
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNS-MEK 432
++I HA H LK F +M + G +P+ T +G+L ACNHAGLV EG A+F S M
Sbjct: 467 SLIHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMAG 526
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGE 492
YG H+ C++D+LGR+G+ +A ++ P +V TLL++CRL ++ G
Sbjct: 527 LYGTFLTPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLASCRLHGNLETGR 586
Query: 493 RLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTF 552
A++L L ++ YVL+S ++A G W D R+ + ++G++KE S +EV+
Sbjct: 587 LAAEKLVELSDQDSASYVLMSGIHAMHGEWRDADMVRRRMDEAGVRKEAGRSWVEVRNEV 646
Query: 553 EKFTVAEFSHSKIGEINYMLKTLSLA 578
F + SH I ML LS A
Sbjct: 647 HTFVAQDVSHPDSPSIYRMLWELSDA 672
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 209/431 (48%), Gaps = 13/431 (3%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM- 94
+V+ L+ K G++ A +FD M +N+V+W++ +SG + G A E F+ M
Sbjct: 28 EVVRDCKRLDGLMKAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMV 87
Query: 95 --HLLPNEYIFASAISACAGIQSLV--KGQQIHAYSLKFGYASISFVGNSLISMYMKVGY 150
+ N++ +A++ACA G+Q+H+ +++ G+ ++VG+ L+ +Y + G
Sbjct: 88 ESGVALNDFACNAALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGS 147
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
+ A V P++V++ +L++ + + E M+ G++P+ + L
Sbjct: 148 TRAAEAVLARMESPDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAA 207
Query: 211 CSVSNDLRKGMILHCLTVKC-KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
C L G+ +H +K + + +T++ YS+ A+ F ++ K++++
Sbjct: 208 CC---PLVLGVQIHGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVT 264
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
W T + E L +F EM ++ V P++F F+ L AC S+ G Q+H+
Sbjct: 265 WCTMMQLHIRDGRPEDALQLFDEMISEGVVSPNEFAFSIALGAC---ESIALGSQLHSLA 321
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
I+ L + V NAL++MY + GL+ +F + ++VSW I+A+ + G A+
Sbjct: 322 IKHGLASHLRVSNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAI 381
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
L +M + G+ P+ F +L++C L+ +G F+ + G LI++
Sbjct: 382 ALLSRMHSQGLTPNDYAFSSVLSSCADLALLDQGR-QFHCLALKLGCDVKTCTGNALINM 440
Query: 450 LGRAGKLLEAE 460
+ G+++ A
Sbjct: 441 YSKCGQIVPAR 451
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 164/341 (48%), Gaps = 41/341 (12%)
Query: 16 KALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMI 75
+++ G LH+ +K G+ + VSN +L++Y + G + +F + + ++VSW+A I
Sbjct: 309 ESIALGSQLHSLAIKHGLASHLRVSNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAI 368
Query: 76 SGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYA 132
S + Q G A+ S+MH L PN+Y F+S +S+CA + L +G+Q H +LK G
Sbjct: 369 SAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLALLDQGRQFHCLALKLGCD 428
Query: 133 SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM 192
+ GN+LI+MY K G A L + ++ S+N+LI G ++ + + + F M
Sbjct: 429 VKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEM 488
Query: 193 LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF--- 249
G P+ + G L C+ + + +G+ F + + LY F
Sbjct: 489 CSNGGEPNESTLLGVLAACNHAGLVDEGV--------------AFFRSAMAGLYGTFLTP 534
Query: 250 -------NLIGEA---EKAFRLIE----EKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
+++G + + A LIE E ++ W T +A+C + E G ++
Sbjct: 535 PHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLASCRLHGNLETG-----RLAA 589
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
+ V D AS + +G+ ++ HG+ A ++R R+++
Sbjct: 590 EKLVELSDQDSASYVLM-SGIHAM-HGEWRDADMVRRRMDE 628
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 6/177 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+L C+ L QG H LK+G N ++N+Y+KCG+++ AR FD M
Sbjct: 398 AFSSVLSSCADLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIM 457
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
R++ SW+++I GH Q GE + L+ FS+M PNE ++AC + +G
Sbjct: 458 DHRDVTSWNSLIHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGV 517
Query: 121 QIHAYSLKFGYASISFVGN--SLISMYMKVGYSSDALLVYGE-AFEPNLVSFNALIA 174
++ Y + + ++ M + G DAL + E FEP ++ + L+A
Sbjct: 518 AFFRSAMAGLYGTFLTPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLA 574
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 175/521 (33%), Positives = 287/521 (55%), Gaps = 33/521 (6%)
Query: 87 ALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYM 146
A + FS H+ +F+ + +C SL G+Q+H+ + G +S F+ N L+++Y
Sbjct: 40 AFDRFSS-HIWSEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYS 98
Query: 147 KVGYSSDALLVYG-------------------------------EAFEPNLVSFNALIAG 175
K G A+ ++G E E N+ ++NA++AG
Sbjct: 99 KCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAG 158
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
++ + E+G +F M G LPD F+ L C+ L G +H KC E N
Sbjct: 159 LIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFN 218
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
V +++ +Y K +GE E+ R + +++++WNT IA + E+ L + M
Sbjct: 219 LVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKM 278
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
G RPD TF S++++C+ LA++ G+QIHA +I+ + V V ++L++MY++CG +
Sbjct: 279 -AGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLE 337
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
S K+F E + +VV W+++IAA+ H G A+ LF QM+ ++ + VTF+ LL AC+
Sbjct: 338 YSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACS 397
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
H GL ++G +F+ M + YG+ P +EH+TC++DLLGR G + EAE + P+ D I
Sbjct: 398 HCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITW 457
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
TLLSAC++ + + R+++++F L P PYVLLSN++ASD W DV+ RK ++D
Sbjct: 458 KTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDR 517
Query: 536 GLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
LKKEP S +EV+ +F + + SH K EI L+ L+
Sbjct: 518 KLKKEPGISWLEVKNQIHQFCMGDKSHPKSVEIASYLRELT 558
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 208/430 (48%), Gaps = 45/430 (10%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKM------------ 53
S LL C +L G LH+ ++ G D +SNH+LNLY+KCG++
Sbjct: 56 SHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPR 115
Query: 54 -------------------ILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM 94
+ ARK+FDEM ERN+ +W+AM++G Q + L FS+M
Sbjct: 116 KNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRM 175
Query: 95 H---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
+ LP+E+ S + CAG+++LV G+Q+H Y K G+ V +SL MYMK G
Sbjct: 176 NELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSL 235
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
+ + N+V++N LIAG +N PE+ + + +M G PD+ +F + C
Sbjct: 236 GEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSC 295
Query: 212 SVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
S L +G +H +K V ++++++YS+ + + K F E D++ W+
Sbjct: 296 SELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWS 355
Query: 272 TFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ-----IH 326
+ IAA + + +F +M + + +D TF S+L AC+ + G + +
Sbjct: 356 SMIAAYGFHGRGVEAIDLFNQMEQEK-LEANDVTFLSLLYACSHCGLKEKGIKFFDLMVE 414
Query: 327 AHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAAHANHRLG 385
+ ++ RL +V++ + G + + L M + +V++W T+++A H+
Sbjct: 415 KYGVKPRLEH----YTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKT 470
Query: 386 GSALKLFEQM 395
A ++ E++
Sbjct: 471 EMARRISEEV 480
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 150/280 (53%), Gaps = 7/280 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+L C+ +AL G +H V K G + +++V + + ++Y KCG + ++ M
Sbjct: 186 ALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAM 245
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
+N+V+W+ +I+G Q G L+ ++ M + P++ F S IS+C+ + +L +GQ
Sbjct: 246 PSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQ 305
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIHA +K G + I V +SLISMY + G +L V+ E ++V ++++IA + +
Sbjct: 306 QIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHG 365
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ + ++F M ++ L + +F L CS KG+ L V+ K P + +
Sbjct: 366 RGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVE-KYGVKPRLEH 424
Query: 241 --TIMALYSKFNLIGEAEKAFRLIEEK-DLISWNTFIAAC 277
++ L ++ + EAE R + K D+I+W T ++AC
Sbjct: 425 YTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSAC 464
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 174/537 (32%), Positives = 287/537 (53%), Gaps = 5/537 (0%)
Query: 24 LHAAVLKMGI-QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
LHA L++G+ + D S +++ Y + G++ A + FDEM R++ +W+AM+SG +
Sbjct: 90 LHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNA 149
Query: 83 EHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
A+ F +M + + +S + C + +H Y++K G FV N
Sbjct: 150 RAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCN 209
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
++I +Y K+G + V+ +LV++N++I+G + Q E+F M G+ P
Sbjct: 210 AMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSP 269
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV-GNTIMALYSKFNLIGEAEKA 258
D + + D+ G +HC V+ + + GN I+ +Y+K + I A++
Sbjct: 270 DVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRM 329
Query: 259 FRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
F + +D +SWNT I + + V+ M G++P TF S+L A + L +
Sbjct: 330 FDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGA 389
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA 378
+Q G ++HA I+ LN DV VG ++++YAKCG + + LF + R+ WN +I+
Sbjct: 390 LQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISG 449
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISP 438
H G AL LF QM+ GI PD VTF+ LL AC+HAGLV +G +FN M+ YGI P
Sbjct: 450 VGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKP 509
Query: 439 DIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQL 498
+H+ C++D+ GRAG+L +A ++ + P+ D + G LL ACR+ +V +G+ ++ L
Sbjct: 510 IAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNL 569
Query: 499 FHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKF 555
F L P YVL+SN+YA G W V R +++ L+K P +S IEV+ + F
Sbjct: 570 FELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVF 626
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/466 (26%), Positives = 212/466 (45%), Gaps = 43/466 (9%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++SS+L C +++H +K G+ ++ V N ++++Y K G + RKVFD
Sbjct: 170 AVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFD 229
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
MS R+LV+W+++ISGH Q G+ A+E F M + P+ S SA A +
Sbjct: 230 GMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICG 289
Query: 119 GQQIHAYSLKFGYASISFV-GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+ +H Y ++ G+ + GN+++ MY K+ A ++ + VS+N LI G++
Sbjct: 290 GRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYM 349
Query: 178 ENQQPEKGFEVFKLMLR-QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
+N + V+ M + +GL P + +F L S L++G +H L++K L +
Sbjct: 350 QNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDV 409
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
+VG ++ LY+K + EA F + WN I+ K LS+F +M +
Sbjct: 410 YVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQE 469
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
G+ PD TF S+LAAC+ V G+ N + Y I+
Sbjct: 470 -GISPDHVTFVSLLAACSHAGLVDQGRNFF---------------NMMQTAYG-IKPIAK 512
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
Y +M R G F+ ++ IKPDS + LL AC
Sbjct: 513 HYACMVDMFGR-----------------AGQLDDAFDFIRNMPIKPDSAIWGALLGACRI 555
Query: 417 AGLVKEGEAYFNSMEKTYGISP-DIEHFTCLIDLLGRAGKLLEAEE 461
G V+ G+ + + + + P ++ ++ + ++ + GK +E
Sbjct: 556 HGNVEMGKV---ASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDE 598
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 24/239 (10%)
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCSYKL 360
D FTF +L A G + Q+HA +R+ L D ALV+ Y + G + +Y+
Sbjct: 70 DAFTFPPLLRAAQGPGT---AAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRA 126
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+EM HR+V +WN +++ + A+ LF +M G+ D+VT +L C V
Sbjct: 127 FDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMC-----V 181
Query: 421 KEGEAYFNSMEKTYGISP--DIEHFTC--LIDLLGRAGKLLEAEEYTKKFP--LGQDPIV 474
G+ Y + D E F C +ID+ G+ G L EE K F +D +
Sbjct: 182 LLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGML---EEVRKVFDGMSSRDLVT 238
Query: 475 LGTLLSACRLRRDVVIGERLAKQLF-HLQPTTTSPYVL-LSNLYASDGMWGDVAGARKM 531
+++S V A ++F ++ + SP VL L +L ++ GD+ G R +
Sbjct: 239 WNSIISGHEQGGQVAS----AVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSV 293
>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
Length = 648
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 178/542 (32%), Positives = 280/542 (51%), Gaps = 13/542 (2%)
Query: 46 LYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEY 101
+Y KCG++ LA +VF M +RN+VSW+A++ G + G+ L +M PNEY
Sbjct: 1 MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEY 60
Query: 102 IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY-GE 160
++++ AC + G IH ++ GY V +SL+ +Y K G DA V+ G
Sbjct: 61 TLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGA 120
Query: 161 AFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR-QGL-LPDRFSFAGGLEICSVSNDLR 218
+ ++NA+++G+ VF+ M R +G PD F+FA L+ CS R
Sbjct: 121 GLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATR 180
Query: 219 KGMILHCLTVKCKLE--SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
+G +H SN + ++ +Y K + A + F +E K++I W +
Sbjct: 181 EGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVG 240
Query: 277 CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
+ + L +F+ G RPD +S++ A A V+ G+Q+H + I+
Sbjct: 241 HAQEGQVTEALELFRRFWRS-GARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGT 299
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
DV GN++V+MY KCGL + ++F EM NVVSW T++ H LG A+ LFE+M+
Sbjct: 300 DVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMR 359
Query: 397 ATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
A G++PD VT++ LL+AC+HAGLV E YF+ + + + P EH+ C++DLLGRAG+L
Sbjct: 360 AGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGEL 419
Query: 457 LEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLY 516
EA + + P+ V TLLSACR+ +DV +G L + YV LSN+
Sbjct: 420 REARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVL 479
Query: 517 ASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVA---EFSHSKIGEINYMLK 573
A G W + R ++ GLKK+ S +EV F E +H + G+I +L+
Sbjct: 480 AEAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLR 539
Query: 574 TL 575
+
Sbjct: 540 DM 541
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 213/442 (48%), Gaps = 18/442 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++S+ L C G+ +H ++ G Q +V++ ++ +Y+K G++ AR+VFD
Sbjct: 61 TLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGA 120
Query: 64 S-ERNLVSWSAMISGHHQAGEHLLALEFFSQMHL-----LPNEYIFASAISACAGIQSLV 117
+ +W+AM+SG+ AG AL F +M P+E+ FAS + AC+G+ +
Sbjct: 121 GLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATR 180
Query: 118 KGQQIHAYSLKFGY--ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
+G Q+HA G+ AS + + +L+ MY+K A+ V+ N++ + A++ G
Sbjct: 181 EGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVG 240
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+ Q + E+F+ R G PD + + + + + +G +HC +K ++
Sbjct: 241 HAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTD 300
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
GN+I+ +Y K L EAE+ FR + +++SW T + + +++F+EM
Sbjct: 301 VSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRA 360
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA-LVNMYAKCGLI 354
GV PD+ T+ ++L+AC+ V ++ + + R R + A +V++ + G +
Sbjct: 361 G-GVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGEL 419
Query: 355 SCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSALKLFEQMKATGIKPDSVTFIGL 410
+ L M + V W T+++A H + +G A + M G P V ++ L
Sbjct: 420 REARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMD--GDNP--VNYVTL 475
Query: 411 LTACNHAGLVKEGEAYFNSMEK 432
AG +E ++M +
Sbjct: 476 SNVLAEAGEWRECHKVRDAMRR 497
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 158/524 (30%), Positives = 292/524 (55%), Gaps = 4/524 (0%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACA 111
A VF E ++++W++M+ + AL+ +++M +P+ + F S + CA
Sbjct: 31 AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90
Query: 112 GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNA 171
+ G+ +H +K+ S ++ +L++MY G A ++ N V + +
Sbjct: 91 LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150
Query: 172 LIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK 231
+I+G+++N P + ++K M G PD + A + C+ DL GM LH +
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210
Query: 232 LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK 291
++ +G+ ++ +Y+K + A + F + +KD+ +W+ I + L +F+
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFR 270
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
E++ +RP++ T ++++ACA L ++ G+ +H ++ R + V + N+L++M++KC
Sbjct: 271 EVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKC 330
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
G I + ++F+ M +++++SWN+++ A H LG AL F M+ T ++PD +TFIG+L
Sbjct: 331 GDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVL 390
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQD 471
TAC+HAGLV+EG+ F +E YG+ EH+ C++DLL RAG L EA E+ + PL D
Sbjct: 391 TACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPD 450
Query: 472 PIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKM 531
+ G++L ACR+ ++ +GE A+ L L+PT Y+LLSN+YA MW +V R++
Sbjct: 451 GAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVREL 510
Query: 532 LKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ + G++K P S + + F + SH +I EI+ ML+ +
Sbjct: 511 MNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQV 554
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 207/408 (50%), Gaps = 18/408 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SLL C+ + G LH V+K + D+ + +LN+YA CG + AR +F+ M
Sbjct: 81 TFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERM 140
Query: 64 SERNLVSWSAMISGH---HQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
RN V W++MISG+ H E LL + + P+E A+ +SACA ++ L G
Sbjct: 141 GHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGM 200
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H++ + + +G++L++MY K G A V+ + + ++ +++ALI G+V+N
Sbjct: 201 KLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNN 260
Query: 181 QPEKGFEVFKLML-RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ + ++F+ + + P+ + + C+ DL G +H + + + +
Sbjct: 261 RSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLN 320
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N+++ ++SK I A++ F + KDLISWN+ + + + L+ F+ M +
Sbjct: 321 NSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTT-DL 379
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHL-----IRMRLNQDVGVGNALVNMYAKCGLI 354
+PD+ TF +L AC+ VQ GK++ + +R++ ++ G +V++ + GL+
Sbjct: 380 QPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLK-SEHYG---CMVDLLCRAGLL 435
Query: 355 SCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSALKLFEQMKAT 398
+ + + M L + W +++ A + N LG A + +++ T
Sbjct: 436 AEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPT 483
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 86/163 (52%)
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+G A F E D+++WN+ + A + + L + EM PD FTF S+L
Sbjct: 28 VGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLK 87
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
CA L + GK +H +++ L+ D+ + L+NMYA CG + + LF M HRN V
Sbjct: 88 GCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVV 147
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
W ++I+ + + AL L+++M+ G PD VT L++AC
Sbjct: 148 WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSAC 190
>gi|115473581|ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|22293699|dbj|BAC10044.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113611925|dbj|BAF22303.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|125601219|gb|EAZ40795.1| hypothetical protein OsJ_25273 [Oryza sativa Japonica Group]
Length = 705
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 178/515 (34%), Positives = 282/515 (54%), Gaps = 4/515 (0%)
Query: 34 QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQ 93
+P+V V +++++AKCG + AR VF+ M R+L +W+AMI G +G L ++ F+
Sbjct: 191 RPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNH 250
Query: 94 MH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGY 150
M + I A+ ISAC L G +H ++K G + +V N+L+ MY K G
Sbjct: 251 MRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGC 310
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
A ++ ++VS+++LI G+ +N +F M+ G+ P+ + A L
Sbjct: 311 VEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPC 370
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
SV +R G +HC +++ LE + FV + ++ LYSK LI AE F L +KDL W
Sbjct: 371 LSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIW 430
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
N+ +A + + + + G++PD T S+L C + GK++HA++I
Sbjct: 431 NSMVAGYAVNGYSDSAFCALRLLQKV-GLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVI 489
Query: 331 RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALK 390
+ +N V NAL++MY KCG + + ++F M RN V++N +I++ H AL
Sbjct: 490 KYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALS 549
Query: 391 LFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLL 450
F+ MK GI PD VTF+ LL+ C+HAGL+ +G ++SM Y ISP+ EH++C++DL
Sbjct: 550 FFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLY 609
Query: 451 GRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYV 510
R GKL EA + + VLG LL+ACR+ + I E + K++F P ++
Sbjct: 610 SRCGKLDEAWCFMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFEQNPNDPGYHI 669
Query: 511 LLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSM 545
LLSN+YA GMW DV R M+++ LKKE S+
Sbjct: 670 LLSNIYADAGMWSDVTRIRTMIQERNLKKETGNSL 704
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 226/466 (48%), Gaps = 10/466 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S +SLL Q+ LHAAVL G ++ ++ YAK G + A +VFD M
Sbjct: 55 SHASLLLRLQSCPDFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGM 114
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKG 119
RN +W+A+I G AG ALE F M + + + + I ACA + ++ +G
Sbjct: 115 PRRNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQG 174
Query: 120 QQIHAY---SLKFGYASIS-FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
+++ + G A + FV +L+ M+ K G +A V+ +L ++ A+I G
Sbjct: 175 RKVWEMVETDIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGG 234
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
V + + ++F M +G D A + C + +L+ G LH VK +
Sbjct: 235 TVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGD 294
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
+V N ++ +Y K + A+ F KD++SW++ I S + +S+F EM +
Sbjct: 295 IYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMIS 354
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
G+ P+ T ASIL + L ++ GK+IH IR L + V +AL+++Y+K GLI
Sbjct: 355 -LGINPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIR 413
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ +F L +++ WN+++A +A + SA ++ G+KPD VT + +L CN
Sbjct: 414 VAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCN 473
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
++ +G+ + K Y I+ L+D+ + G L A+E
Sbjct: 474 QHHMLIQGKELHAYVIK-YCINSVCSVNNALLDMYCKCGFLEVAKE 518
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 193/363 (53%), Gaps = 5/363 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
++++ C + LQ G +LH +K G D+ VSN ++++Y KCG + +A +F +
Sbjct: 264 ATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNS 323
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQI 122
+++VSWS++I G+ Q G H +++ F +M L PN AS + + ++ + G++I
Sbjct: 324 KDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKEI 383
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H +S++ G FV ++LI +Y K G A ++ + +L +N+++AG+ N
Sbjct: 384 HCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYS 443
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
+ F +L+ + GL PD + L +C+ + L +G LH +K + S V N +
Sbjct: 444 DSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNAL 503
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y K + A++ F+L+ E++ +++N I++ ++ LS F M D G+ PD
Sbjct: 504 LDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRD-GIAPD 562
Query: 303 DFTFASILAACAGLASVQHGKQI-HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
TF ++L+ C+ + G + H+ L ++ + + +V++Y++CG + ++
Sbjct: 563 KVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFM 622
Query: 362 NEM 364
+ M
Sbjct: 623 SNM 625
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 152/306 (49%), Gaps = 9/306 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ +++S+L S K ++ G +H ++ G++ V + +++LY+K G + +A +F
Sbjct: 361 SSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFW 420
Query: 62 EMSERNLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVK 118
+++L W++M++G+ G AL ++ L P+ S + C L++
Sbjct: 421 LTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQ 480
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+++HAY +K+ S+ V N+L+ MY K G+ A V+ E N V++N LI+ F +
Sbjct: 481 GKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGK 540
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPF 237
+ ++ F LM R G+ PD+ +F L CS + + KG+ + H + +
Sbjct: 541 HNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKE 600
Query: 238 VGNTIMALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAACS--HCADYEK--GLSVFKE 292
+ I+ LYS+ + EA + EE ++ +AAC + D + G +F++
Sbjct: 601 HYSCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFEQ 660
Query: 293 MSNDHG 298
ND G
Sbjct: 661 NPNDPG 666
>gi|357457477|ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488067|gb|AES69270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 944
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 177/537 (32%), Positives = 296/537 (55%), Gaps = 5/537 (0%)
Query: 14 KTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSA 73
+ + L++G ++ L+MG+ D++V+ ++ +YAKCG++ AR++F + R+LV+WSA
Sbjct: 311 EMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSA 370
Query: 74 MISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFG 130
+S + G L F M L P++ I + +S C I ++ G+ +H Y++K
Sbjct: 371 FLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKAD 430
Query: 131 YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFK 190
S + +L+SMY++ + A+ ++ ++V +N LI GF + P E+F
Sbjct: 431 MESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFN 490
Query: 191 LMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN 250
+ G+LPD + G C++ +DL G LH K ES+ V +M +Y+K
Sbjct: 491 RLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCG 550
Query: 251 LIGEAEKAFRLIEE-KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
+ E+ F L + KD +SWN IA H + +S F+ M ++ VRP+ TF +I
Sbjct: 551 SLCSVERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLEN-VRPNLVTFVTI 609
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
L A + L+ ++ H +IRM +GN+L++MYAKCG + S K F+EM +++
Sbjct: 610 LPAVSYLSILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDT 669
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNS 429
+SWN +++A+A H G A+ LF M+ + ++ DSV++I +L+AC H+GL++EG F S
Sbjct: 670 ISWNAMLSAYAMHGQGELAVALFSVMQESNVRVDSVSYISVLSACRHSGLIQEGWDIFAS 729
Query: 430 MEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVV 489
M + + + P +EH+ C++DLLG AG E K D V G LL+AC++ +V
Sbjct: 730 MCEKHHVEPSMEHYACMVDLLGCAGLFDEVLSLLNKMTTEPDARVWGALLAACKIHSNVT 789
Query: 490 IGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMI 546
+GE L L+P +V+LS++YA G W D R + + GLKK P YS +
Sbjct: 790 LGEVAVHHLLKLEPRNPVHHVVLSDIYAQCGRWNDARRTRSHINNHGLKKIPGYSWV 846
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 244/463 (52%), Gaps = 9/463 (1%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
S+H V++ I +VSN ++++Y KCG + A++VFD M R+ VSW+ M++G+ + G
Sbjct: 221 SIHGYVVRRSICG--VVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNG 278
Query: 83 EHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
+ L+ +M ++ N+ +A+ A ++ L KG++I+ Y+L+ G S V
Sbjct: 279 CYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVAT 338
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
++ MY K G A ++ +LV+++A ++ VE P + +F++M +GL P
Sbjct: 339 PIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKP 398
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
D+ + + C+ +++ G I+HC +K +ES+ + T++++Y +F L A F
Sbjct: 399 DKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLF 458
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
++ KD++ WNT I + D L +F + G+ PD T + +ACA + +
Sbjct: 459 NRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLS-GILPDSGTMVGLFSACAIMDDL 517
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH-RNVVSWNTIIAA 378
G +H + + D+ V AL++MYAKCG + +LF H ++ VSWN +IA
Sbjct: 518 DLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAG 577
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISP 438
+ ++ A+ F +MK ++P+ VTF+ +L A ++ +++E A+ + + +S
Sbjct: 578 YLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSC 637
Query: 439 DIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+ LID+ + G+L +E+ + +D I +LSA
Sbjct: 638 TLIG-NSLIDMYAKCGQLRYSEKCFHEME-NKDTISWNAMLSA 678
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 232/457 (50%), Gaps = 7/457 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L C+ +G++++ ++ G++ DV + +++++ K G + AR VFD+M ++
Sbjct: 105 VLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKD 164
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVK---GQQIHA 124
V W+AMISG Q+ ALE F +M + E S ++ + L + IH
Sbjct: 165 GVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHG 224
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
Y ++ + V NSLI MY K G A V+ + VS+ ++AG+V+N +
Sbjct: 225 YVVRRSICGV--VSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFE 282
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
G ++ M R + ++ + L + + DL KG ++ ++ L S+ V I+
Sbjct: 283 GLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVC 342
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y+K + +A + F +E +DL++W+ F++A + LS+F+ M + G++PD
Sbjct: 343 MYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYE-GLKPDKA 401
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
+ +++ C ++++ GK +H + I+ + D+ + LV+MY + L + + LFN M
Sbjct: 402 ILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRM 461
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+++V WNT+I + AL++F +++ +GI PDS T +GL +AC + G
Sbjct: 462 QIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGT 521
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+EK+ G DI L+D+ + G L E
Sbjct: 522 CLHGGIEKS-GFESDIHVKVALMDMYAKCGSLCSVER 557
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 190/395 (48%), Gaps = 12/395 (3%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+S L+ C++ + G +H +K ++ D+ + ++++Y + A +F+ M
Sbjct: 403 LSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQ 462
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQ 121
+++V W+ +I+G + G+ LALE F+++ L LP+ SACA + L G
Sbjct: 463 IKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTC 522
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGY--SSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+H K G+ S V +L+ MY K G S + L + + + VS+N +IAG++ N
Sbjct: 523 LHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDE-VSWNVMIAGYLHN 581
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ F+ M + + P+ +F L S + LR+ M H ++ S +G
Sbjct: 582 GYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSCTLIG 641
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N+++ +Y+K + +EK F +E KD ISWN ++A + E +++F M + V
Sbjct: 642 NSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLSAYAMHGQGELAVALFSVMQ-ESNV 700
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLI-RMRLNQDVGVGNALVNMYAKCGLISCSY 358
R D ++ S+L+AC +Q G I A + + + + +V++ GL
Sbjct: 701 RVDSVSYISVLSACRHSGLIQEGWDIFASMCEKHHVEPSMEHYACMVDLLGCAGLFDEVL 760
Query: 359 KLFNEMLHR-NVVSWNTIIAA---HANHRLGGSAL 389
L N+M + W ++AA H+N LG A+
Sbjct: 761 SLLNKMTTEPDARVWGALLAACKIHSNVTLGEVAV 795
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 186/408 (45%), Gaps = 14/408 (3%)
Query: 40 SNHVLNLYAKC---GKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFS---Q 93
+NH L L C ++ F ++ +L+ +++ I + + A+ + +
Sbjct: 33 NNHYLKLINSCKYINPLLQIHTHFLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILK 92
Query: 94 MHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSD 153
+ L P+++ F + AC +G I+ + G ++G SLI M+ K+G +
Sbjct: 93 IGLKPDKFTFNFVLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDN 152
Query: 154 ALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSV 213
A V+ + + V +NA+I+G ++ P + E+F M +G D+ S S
Sbjct: 153 ARNVFDKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSR 212
Query: 214 SNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTF 273
D+ +H V+ + V N+++ +Y K + A++ F + +D +SW T
Sbjct: 213 LGDVGCCKSIHGYVVRRSICG--VVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATM 270
Query: 274 IAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR 333
+A Y +GL + +M + V+ + + L A + ++ GK+I+ + ++M
Sbjct: 271 MAGYVKNGCYFEGLQLLHKMRRGN-VKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMG 329
Query: 334 LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFE 393
L D+ V +V MYAKCG + + +LF + R++V+W+ ++A L +F+
Sbjct: 330 LMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQ 389
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIE 441
M+ G+KPD L++ C + G+ + Y I D+E
Sbjct: 390 VMQYEGLKPDKAILSILVSGCTEISNIGLGK-----IMHCYAIKADME 432
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 156/319 (48%), Gaps = 7/319 (2%)
Query: 164 PNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMIL 223
P+L+ +N+ I + + K ++ +L+ GL PD+F+F L+ C+ + D +G+ +
Sbjct: 62 PSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDFHEGVNI 121
Query: 224 HCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY 283
+ V LE + ++G +++ ++ K + A F + KD + WN I+ S +
Sbjct: 122 YKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQSLNP 181
Query: 284 EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG-VGN 342
+ L +F M + G D + ++ A + L V K IH +++R + G V N
Sbjct: 182 CEALEMFWRMQME-GFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSI---CGVVSN 237
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
+L++MY KCG + + ++F+ M R+ VSW T++A + + L+L +M+ +K
Sbjct: 238 SLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKM 297
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
+ V + L +++G+ +N + G+ DI T ++ + + G+L +A E
Sbjct: 298 NKVAVVNALLVVAEMRDLEKGKEIYNYALQM-GLMSDIVVATPIVCMYAKCGELKKAREL 356
Query: 463 TKKFPLGQDPIVLGTLLSA 481
G+D + LSA
Sbjct: 357 FLSLE-GRDLVAWSAFLSA 374
>gi|449522418|ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 182/548 (33%), Positives = 300/548 (54%), Gaps = 4/548 (0%)
Query: 32 GIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFF 91
G + D+ +SN ++N+Y KCG++ AR++F+ + R++VSW++++S + + G L+
Sbjct: 177 GFESDLALSNSMVNMYGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLL 236
Query: 92 SQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKV 148
M + P++ F SA+SA A L G+ +H LK G V ++L+ +Y++
Sbjct: 237 QAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRC 296
Query: 149 GYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGL 208
A V+ E ++V + A+I+G V+N +K VF M+ + P + A GL
Sbjct: 297 RCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGL 356
Query: 209 EICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLI 268
C+ G +H ++ + + N+++ +Y+K N + ++ F + EKDL+
Sbjct: 357 AACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLV 416
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
SWN +A + KG+ F EM +RPD T S+L AC ++ GK IH
Sbjct: 417 SWNAIVAGHAKNGYLSKGIFFFNEMRKSF-LRPDSITVTSLLQACGSAGALCQGKWIHNF 475
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
++R L + ALV+MY KCG + + K F+ ML R++V+W+T+I + + G A
Sbjct: 476 VLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIA 535
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID 448
L+ + + TG++P+ V FI +L+AC+H GL+ +G + + SM K + +SP++EH C++D
Sbjct: 536 LRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVD 595
Query: 449 LLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSP 508
LL RAGK+ EA + K +VLG LL ACR+ V +G+ +A+ +F L+P
Sbjct: 596 LLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPGN 655
Query: 509 YVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
+V L+N YAS W V A ++ GLKK P +S IEV GT F + SH KI +I
Sbjct: 656 FVQLANSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSIEVHGTTFTFFASHNSHPKIEKI 715
Query: 569 NYMLKTLS 576
+K LS
Sbjct: 716 ILTVKALS 723
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 143/462 (30%), Positives = 244/462 (52%), Gaps = 6/462 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + SL C+ G+SLH +V+ G+ D + + +++ YAK G + L RKVFD
Sbjct: 49 AYTFPSLFKACTNLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFD 108
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQ 121
M +RN+V W+ +I + + G+ +A F QM + + +S GI L
Sbjct: 109 TMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKLPLLLC 168
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H + G+ S + NS+++MY K G +DA ++ ++VS+N+L++ + +
Sbjct: 169 LHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGA 228
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
E+ ++ + M + + PD+ +F L ++ DLR G ++H L +K L + V +
Sbjct: 229 TEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESA 288
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC--SHCADYEKGLSVFKEMSNDHGV 299
++ LY + + A K F+ EKD++ W I+ + CAD K L VF +M + V
Sbjct: 289 LVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCAD--KALGVFYQMI-ESNV 345
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+P T AS LAACA L G IH +++R + D+ N+LV MYAKC + S
Sbjct: 346 KPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCS 405
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+FN+M+ +++VSWN I+A HA + + F +M+ + ++PDS+T LL AC AG
Sbjct: 406 IFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGA 465
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ +G+ N + ++ I P I T L+D+ + G L A++
Sbjct: 466 LCQGKWIHNFVLRSSLI-PCIMTETALVDMYFKCGNLENAQK 506
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 186/396 (46%), Gaps = 8/396 (2%)
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
S +LVS + HHQ + ++++ + H + Y F S AC + G +H
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQ---KTHTQLDAYTFPSLFKACTNLNLFSHGLSLH 72
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ G + S++G+SLIS Y K G V+ + N+V + +I + +
Sbjct: 73 QSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDID 132
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
F +FK M G+ P + L + + L + LHCL + ES+ + N+++
Sbjct: 133 IAFSMFKQMRESGIQPTSVTL---LSLLPGISKLPLLLCLHCLIILHGFESDLALSNSMV 189
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y K I +A + F I +D++SWN+ ++A S E+ L + + M + ++PD
Sbjct: 190 NMYGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIED-IKPDK 248
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
TF S L+A A ++ GK +H +++ LN D V +ALV +Y +C + +YK+F
Sbjct: 249 QTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKS 308
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
++VV W +I+ + AL +F QM + +KP + T L AC G G
Sbjct: 309 TTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIG 368
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+ + + GI DI L+ + + KL ++
Sbjct: 369 ASIHGYVLRQ-GIMLDIPAQNSLVTMYAKCNKLQQS 403
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 109/214 (50%), Gaps = 8/214 (3%)
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
S+N+ ++ S+ + + L + M H + D +TF S+ AC L HG +H
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQKTH-TQLDAYTFPSLFKACTNLNLFSHGLSLHQS 74
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
++ L+ D +G++L++ YAK G I K+F+ ML RNVV W TII +++ A
Sbjct: 75 VVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIA 134
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK-EGEAYFNSMEKTYGISPDIEHFTCLI 447
+F+QM+ +GI+P SVT + LL G+ K + + +G D+ ++
Sbjct: 135 FSMFKQMRESGIQPTSVTLLSLL-----PGISKLPLLLCLHCLIILHGFESDLALSNSMV 189
Query: 448 DLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
++ G+ G++ +A + +D + +LLSA
Sbjct: 190 NMYGKCGRIADARRLFESIGC-RDIVSWNSLLSA 222
>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 922
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 182/565 (32%), Positives = 308/565 (54%), Gaps = 14/565 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S +S+L C+ L+QG+ LHA + + G++ +V+V N ++++YA+CG + AR+VFD +
Sbjct: 255 SFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNL 314
Query: 64 SERNLVSWSAMISGHHQAGEHLL--ALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
N VSW+AMI+G+ GE + A F M P+ + +AS ++ CA L +
Sbjct: 315 RSPNRVSWNAMIAGY---GEGFMEEAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNR 371
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+++H+ ++ + + V +LISMY K G +A V+ + E N VS+NA IA
Sbjct: 372 GKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCR 431
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ ++ F+VFK M R ++PD +F L C+ D +G +H + + SN V
Sbjct: 432 HGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLV 491
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N ++++Y + + +A + F I +DL SWN IAA +F + ++ G
Sbjct: 492 ANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGG 551
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ D +TF ++L A A L + G++IH + + L +D+ + L+ MY+KCG + +Y
Sbjct: 552 -KGDKYTFINVLRAIANLEDLDAGRKIHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDAY 610
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+F + ++VV WN ++AA+ + G ALKLF+QM+ G+ PDS T+ +L AC G
Sbjct: 611 SVFKNVQEKDVVCWNAMLAAYNHSDHGQDALKLFQQMRLEGVNPDSATYTSVLNACARLG 670
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
++ G+ F++ K + D H+ C++ LGRA L EAEE+ ++ D ++ +L
Sbjct: 671 AIEHGKK-FHTQLKEAAMETDTRHYACMVAALGRASLLKEAEEFIEEISSESDALMWESL 729
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVL--LSNLYASDGMWGDVAGARKMLKDSG 536
L ACR+ +V + E + L ++ +SP V L N+YA+ G W DV+ + ++++G
Sbjct: 730 LVACRIHHNVGLAETAVEHLLDVK-AQSSPAVCEQLMNIYAAAGRWEDVSVIKATMREAG 788
Query: 537 LKKEPSYSMIEVQGTFEKFTVAEFS 561
L P IEV F F FS
Sbjct: 789 LLA-PKSCTIEVNSEFHTFMTNHFS 812
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 173/481 (35%), Positives = 264/481 (54%), Gaps = 7/481 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S S+L C L+ G +H+ + K G + DV VS ++N+Y KCG + LARKVF+EM
Sbjct: 154 SFISILSACQTPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEM 213
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
ERN+VSW+AMISG+ Q G+ A F ++ PN+ FAS + AC L +G
Sbjct: 214 RERNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGL 273
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++HAY + G VGN+LISMY + G ++A V+ PN VS+NA+IAG+ E
Sbjct: 274 KLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGEGF 333
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E+ F +F+ M ++G PDRF++A L IC+ DL +G LH V+ E++ V
Sbjct: 334 M-EEAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVAT 392
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++++Y+K + EA K F + EK+ +SWN FIA C ++ VFK+M D V
Sbjct: 393 ALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRD-DVI 451
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD TF ++L +C + G+ IH + + + + V NAL++MY +CG ++ + ++
Sbjct: 452 PDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREV 511
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F + R++ SWN +IAA+ H GSA LF + K+ G K D TFI +L A + +
Sbjct: 512 FYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDL 571
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
G +EK G+ DI T LI + + G L +A K +D + +L+
Sbjct: 572 DAGRKIHGLVEKA-GLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQ-EKDVVCWNAMLA 629
Query: 481 A 481
A
Sbjct: 630 A 630
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 161/456 (35%), Positives = 255/456 (55%), Gaps = 6/456 (1%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
L C + K+L +G +H + +PD+ ++N ++++Y+KCG + A VF M ++++
Sbjct: 58 LQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSMEDKDV 117
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAY 125
VSW+AMISG+ G A++ F QM L PN+ F S +SAC L G+QIH++
Sbjct: 118 VSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEFGEQIHSH 177
Query: 126 SLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKG 185
K GY S V +LI+MY K G A V+ E E N+VS+ A+I+G+V++ ++
Sbjct: 178 ITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSKEA 237
Query: 186 FEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMAL 245
F +F+ ++R G P++ SFA L C+ NDL +G+ LH + LE VGN ++++
Sbjct: 238 FVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISM 297
Query: 246 YSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFT 305
Y++ + A + F + + +SWN IA E+ +F++M G +PD FT
Sbjct: 298 YARCGSLANARQVFDNLRSPNRVSWNAMIAGYGE-GFMEEAFRLFRDMQQ-KGFQPDRFT 355
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
+AS+LA CA A + GK++H+ ++R DV V AL++MYAKCG + + K+FN+M
Sbjct: 356 YASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMP 415
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
+N VSWN IA H A ++F+QM+ + PD VTFI LL +C + G
Sbjct: 416 EKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGR- 474
Query: 426 YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
Y + +G+ + LI + GR GKL +A E
Sbjct: 475 YIHGKIDQWGMLSNNLVANALISMYGRCGKLADARE 510
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 211/424 (49%), Gaps = 20/424 (4%)
Query: 99 NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY 158
N +A + C +SL +G+++H + + ++ N LISMY K G DA V+
Sbjct: 50 NLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVF 109
Query: 159 GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLR 218
+ ++VS+NA+I+G+ + + ++ ++F M R+GL P++ SF L C L
Sbjct: 110 QSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLE 169
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
G +H K ES+ V ++ +Y K + A K F + E++++SW I+
Sbjct: 170 FGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYV 229
Query: 279 HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
D ++ +F+++ G +P+ +FASIL AC ++ G ++HA++ + L Q+V
Sbjct: 230 QHGDSKEAFVLFQKLIRS-GTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEV 288
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
VGNAL++MYA+CG ++ + ++F+ + N VSWN +IA + + A +LF M+
Sbjct: 289 LVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGEGFM-EEAFRLFRDMQQK 347
Query: 399 GIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLE 458
G +PD T+ LL C + G+ + + +T D+ T LI + + G L E
Sbjct: 348 GFQPDRFTYASLLAICADRADLNRGKELHSQIVRT-AWEADVTVATALISMYAKCGSLEE 406
Query: 459 AEEYTKKFPLGQDPIVLGTLLSAC--------------RLRRDVVIGERLAKQLFHLQPT 504
A + + P ++ + ++ C ++RRD VI + + L +
Sbjct: 407 ARKVFNQMP-EKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVT--FITLLNS 463
Query: 505 TTSP 508
TSP
Sbjct: 464 CTSP 467
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 151/275 (54%), Gaps = 8/275 (2%)
Query: 190 KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF 249
+L+ ++G+ + +A L+ C + L +G +H + E + ++ N ++++YSK
Sbjct: 40 QLLGKRGVQANLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKC 99
Query: 250 NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
I +A F+ +E+KD++SWN I+ + ++ + +F +M + G++P+ +F SI
Sbjct: 100 GSIEDANNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQRE-GLKPNQNSFISI 158
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
L+AC ++ G+QIH+H+ + DV V AL+NMY KCG + + K+FNEM RNV
Sbjct: 159 LSACQTPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNV 218
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG---EAY 426
VSW +I+ + H A LF+++ +G +P+ V+F +L AC + +++G AY
Sbjct: 219 VSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAY 278
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
K G+ ++ LI + R G L A +
Sbjct: 279 I----KQAGLEQEVLVGNALISMYARCGSLANARQ 309
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 167/473 (35%), Positives = 276/473 (58%), Gaps = 4/473 (0%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
F S++ +C ++L + +Q+HA G V N L+ MY++ G DA ++
Sbjct: 56 FRSSLLSC---RNLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMS 112
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
+ + S++ ++ G+ + F +F+ +LR G D +S + C DL+ G +
Sbjct: 113 KRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRL 172
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
+HC+T+KC L+ FV T++ +Y++ ++ +A + F + ++DL +W I A +
Sbjct: 173 IHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGV 232
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
+ L F M N G+ PD +++ ACA L ++ K IHA++ + DV +G
Sbjct: 233 PVESLVFFDRMRN-QGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGT 291
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
A+++MYAKCG + + +F+ M RNV++W+ +IAA+ H G AL+LF M +GI P
Sbjct: 292 AMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILP 351
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
+ +TF+ LL AC+HAGL++EG+ +F+SM YG++PD++H+TC++DLLGRAG+L EA E
Sbjct: 352 NRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEM 411
Query: 463 TKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMW 522
+ P+ +D ++ G LL ACR+ R + + ER+A+ L LQ YVLLSN+YA+ G W
Sbjct: 412 IEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKW 471
Query: 523 GDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
D+A R ++ GL+K P + IEV +F V + +H + EI MLK L
Sbjct: 472 EDMAKTRDLMTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRL 524
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 177/373 (47%), Gaps = 6/373 (1%)
Query: 16 KALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMI 75
+ L Q +HA + G ++ V+N +L +Y + G + A+++FD MS+R+ SWS ++
Sbjct: 64 RNLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIV 123
Query: 76 SGHHQAGEHLLALEFFSQMHL--LP-NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYA 132
G+ + G F ++ P ++Y I AC ++ L G+ IH +LK G
Sbjct: 124 GGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLD 183
Query: 133 SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM 192
FV +L+ MY + DA ++ + ++ +L ++ +I E+ P + F M
Sbjct: 184 YGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRM 243
Query: 193 LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI 252
QG++PD+ + + C+ + K +H + +G ++ +Y+K +
Sbjct: 244 RNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSV 303
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
A F ++ +++I+W+ IAA + EK L +F M G+ P+ TF S+L A
Sbjct: 304 ESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRS-GILPNRITFVSLLYA 362
Query: 313 CAGLASVQHGKQIHAHLI-RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM-LHRNVV 370
C+ ++ G++ + + + DV +V++ + G + + ++ M + ++ V
Sbjct: 363 CSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEV 422
Query: 371 SWNTIIAAHANHR 383
W ++ A HR
Sbjct: 423 LWGALLGACRIHR 435
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 154/322 (47%), Gaps = 15/322 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S ++ C K L+ G +H LK G+ V ++++YA+C + A ++F +M
Sbjct: 153 SAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKM 212
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+R+L +W+ MI ++G + +L FF +M ++P++ + + ACA + ++ K +
Sbjct: 213 WKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAK 272
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IHAY GY+ +G ++I MY K G A ++ N+++++A+IA + +
Sbjct: 273 AIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHG 332
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
Q EK E+F +MLR G+LP+R +F L CS + + +G + V
Sbjct: 333 QGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFF-----SSMWDEYGVTP 387
Query: 241 TIMALYSKFNLIGEA---EKAFRLIE----EKDLISWNTFIAACSHCADYEKGLSVFKEM 293
+ +L+G A ++A +IE EKD + W + AC + V + +
Sbjct: 388 DVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSL 447
Query: 294 SNDHGVRPDDFTFASILAACAG 315
+P + S + A AG
Sbjct: 448 LKLQSQKPGHYVLLSNIYANAG 469
>gi|357122034|ref|XP_003562721.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Brachypodium distachyon]
Length = 689
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 190/580 (32%), Positives = 318/580 (54%), Gaps = 11/580 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S L + + G L + K G+ +V ++ +L++YAKCG++ AR+VFD M
Sbjct: 93 ALGSSLRSAAAARCPALGAQLQSLAFKSGLADNVFAASALLHMYAKCGRVRDARRVFDGM 152
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
ERN VSW+A+I+G+ ++G+ L ALE F M L+P+E FA+ ++A +
Sbjct: 153 PERNTVSWNALIAGYVESGKVLQALELFINMETERLVPDEATFAALLTAFDDSNYFLM-H 211
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEP-NLVSFNALIAGFVEN 179
Q+H +K+G A V N+ I+ Y + G +++ ++ + + +L+S+NA++ + +
Sbjct: 212 QLHGKIVKYGSALGLTVSNAAITAYSQCGALAESRRIFDQIGDSRDLISWNAMLGAYTYH 271
Query: 180 QQPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
F M+R+ G+ D +SF + C +D +G +H L +K LE V
Sbjct: 272 GMDYDAMGFFVRMIRESGVQLDMYSFTSIISTCPEHDD-HQGRAIHGLVIKNGLEGATPV 330
Query: 239 GNTIMALYSKFN---LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
N ++A+Y++ + ++ +A K F + KD +SWN+ + S L F+ M +
Sbjct: 331 CNALIAMYTRISGNCMMEDACKCFDSLLIKDTVSWNSMLTGYSQHNLSADALRFFRCMQS 390
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
+ +R D++ F++ L +C+ LA +Q G+QIH +I + V ++L+ MY+K G++
Sbjct: 391 AN-IRCDEYAFSAALRSCSELAVLQLGRQIHGSIIHSGFASNNFVSSSLIFMYSKSGILD 449
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ K F E + V WN++I +A H LF +M + D VTF+GL+T+C+
Sbjct: 450 DAKKSFEEADKGSSVPWNSMIFGYAQHGHAHIVHSLFNEMVELKVPLDHVTFVGLITSCS 509
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
HAGLV EG N+ME YGI +EH+ C +DL GRAG+L +A+E P D +V
Sbjct: 510 HAGLVDEGSEILNAMETRYGIPLRMEHYACGVDLYGRAGQLEKAKELIDSMPFEPDAMVW 569
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
TLL ACR+ ++ + +A L +P S Y+LLS++Y+ GMW D A ++ +K+
Sbjct: 570 MTLLGACRIHGNMELASEVASHLLVSEPKQHSTYILLSSMYSGLGMWSDRAIVQREMKNR 629
Query: 536 GLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
GL K P +S IEV+ F + SH ++ EI ML L
Sbjct: 630 GLSKVPGWSWIEVKNEVHSFNAEDRSHPRMDEIYEMLSLL 669
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 127/433 (29%), Positives = 213/433 (49%), Gaps = 16/433 (3%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAG 112
AR+VFDE+ + SW+++++ H AG H A MH + N + S++ + A
Sbjct: 44 ARRVFDEIPRPDAASWNSLLTAHVSAGAHPAAWCLLRAMHAQGVAANTFALGSSLRSAAA 103
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
+ G Q+ + + K G A F ++L+ MY K G DA V+ E N VS+NAL
Sbjct: 104 ARCPALGAQLQSLAFKSGLADNVFAASALLHMYAKCGRVRDARRVFDGMPERNTVSWNAL 163
Query: 173 IAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
IAG+VE+ + + E+F M + L+PD +FA L SN LH VK
Sbjct: 164 IAGYVESGKVLQALELFINMETERLVPDEATFAALLTAFDDSNYFLMHQ-LHGKIVKYGS 222
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLI-EEKDLISWNTFIAACS-HCADYEKGLSVF 290
V N + YS+ + E+ + F I + +DLISWN + A + H DY+ + F
Sbjct: 223 ALGLTVSNAAITAYSQCGALAESRRIFDQIGDSRDLISWNAMLGAYTYHGMDYD-AMGFF 281
Query: 291 KEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
M + GV+ D ++F SI++ C Q G+ IH +I+ L V NAL+ MY +
Sbjct: 282 VRMIRESGVQLDMYSFTSIISTCPEHDDHQ-GRAIHGLVIKNGLEGATPVCNALIAMYTR 340
Query: 351 CG---LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTF 407
++ + K F+ +L ++ VSWN+++ ++ H L AL+ F M++ I+ D F
Sbjct: 341 ISGNCMMEDACKCFDSLLIKDTVSWNSMLTGYSQHNLSADALRFFRCMQSANIRCDEYAF 400
Query: 408 IGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA----EEYT 463
L +C+ +++ G S+ + G + + + LI + ++G L +A EE
Sbjct: 401 SAALRSCSELAVLQLGRQIHGSIIHS-GFASNNFVSSSLIFMYSKSGILDDAKKSFEEAD 459
Query: 464 KKFPLGQDPIVLG 476
K + + ++ G
Sbjct: 460 KGSSVPWNSMIFG 472
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 235 NPFVGNTIMALYSKFNL-IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
+P N ++ YS L + A + F I D SWN+ + A + + + M
Sbjct: 23 SPTRWNQLLTAYSLSPLGLAAARRVFDEIPRPDAASWNSLLTAHVSAGAHPAAWCLLRAM 82
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
+ GV + F S L + A G Q+ + + L +V +AL++MYAKCG
Sbjct: 83 -HAQGVAANTFALGSSLRSAAAARCPALGAQLQSLAFKSGLADNVFAASALLHMYAKCGR 141
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ + ++F+ M RN VSWN +IA + AL+LF M+ + PD TF LLTA
Sbjct: 142 VRDARRVFDGMPERNTVSWNALIAGYVESGKVLQALELFINMETERLVPDEATFAALLTA 201
Query: 414 CN----------HAGLVKEGEA 425
+ H +VK G A
Sbjct: 202 FDDSNYFLMHQLHGKIVKYGSA 223
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 196/618 (31%), Positives = 322/618 (52%), Gaps = 53/618 (8%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKC------GKMILA 56
KS LL +C + L+Q + +L+ G S LN + C G + A
Sbjct: 33 KSCIFLLKNCKSMQHLKQ---IQTQILRTGFHQ----SGDTLNKFMVCCTDPSIGNLHYA 85
Query: 57 RKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGI 113
++F+ + L ++ +I + G A+ F Q+ L P+ + + A +
Sbjct: 86 ERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCL 145
Query: 114 QSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALI 173
+ +G++++ + +K G ++V NSL+ MY +VG + V+ E + ++VS+N LI
Sbjct: 146 GEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLI 205
Query: 174 AGFVENQQPEKGFEVFKLMLRQG-LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
+G+V+ ++ E +VF+ M +Q L P+ + L C L G +H V+ +L
Sbjct: 206 SGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIH-RYVREQL 264
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD---------- 282
+GN ++ +Y K + A + F + K +I W + ++ +C
Sbjct: 265 GFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFER 324
Query: 283 ---------------------YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQH 321
++ +++F+EM V PD FT ++L CA L +++
Sbjct: 325 SPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKR-VSPDRFTLVALLTGCAQLGTLEQ 383
Query: 322 GKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN 381
GK IH ++ ++ D VG AL+ MYAKCG I S ++FN + ++ SW +II A
Sbjct: 384 GKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAM 443
Query: 382 HRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIE 441
+ AL+LF +M TG+KPD +TFIG+L+AC+H GLV+EG +F SM Y I P +E
Sbjct: 444 NGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLE 503
Query: 442 HFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL---GTLLSACRLRRDVVIGERLAKQL 498
H+ CLIDLLGRAG+L EAEE +K P + +++ G LLSACR +V +GER+AK+L
Sbjct: 504 HYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRL 563
Query: 499 FHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVA 558
++ +S + LL+N+YAS W DV R+ +KD G+KK P S +EV G +F V
Sbjct: 564 VGIESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVG 623
Query: 559 EFSHSKIGEINYMLKTLS 576
+ SH ++ EI ML +++
Sbjct: 624 DASHPEMREIYSMLDSIA 641
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 13/218 (5%)
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC-----GLISCSY 358
FT S + S+QH KQI ++R +Q G+ L C G + +
Sbjct: 30 FTKKSCIFLLKNCKSMQHLKQIQTQILRTGFHQS---GDTLNKFMVCCTDPSIGNLHYAE 86
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
++FN + + +N +I A + A+ LF Q++ G+ PD+ T+ + A G
Sbjct: 87 RIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLG 146
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
V+EGE + + K+ G+ D L+D+ G++ + ++ P +D + L
Sbjct: 147 EVREGEKVYGFVVKS-GLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMP-QRDVVSWNVL 204
Query: 479 LSA---CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLS 513
+S CR D V R +Q L+P + LS
Sbjct: 205 ISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLS 242
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 175/554 (31%), Positives = 303/554 (54%), Gaps = 17/554 (3%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+H+ K+G + V + +++ Y+ C + A VF+ + ++ V W+AM+S
Sbjct: 184 VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVS------- 236
Query: 84 HLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLIS 143
+S+ N + A + C+ + Q IH ++K + VG +L+
Sbjct: 237 ------CYSENDCPENAFRCAQS---CSLLAISCARQGIHGCAIKTLNDTEPHVGGALLD 287
Query: 144 MYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFS 203
MY K G DA L + +++ + +I+ + ++ Q E+ FE+F ++R +LP+ +S
Sbjct: 288 MYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYS 347
Query: 204 FAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIE 263
+ L+ C+ L G +H +K ES+ FVGN +M Y+K N + + K F +
Sbjct: 348 LSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLR 407
Query: 264 EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGK 323
+ + +SWNT + S E+ LSVF EM + T++S+L ACA AS++H
Sbjct: 408 DANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQ-MPCTQVTYSSVLRACASTASIRHAG 466
Query: 324 QIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR 383
QIH + + N D +GN+L++ YAKCG I + K+F ++ R+++SWN II+ +A H
Sbjct: 467 QIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHG 526
Query: 384 LGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF 443
AL+LF++M + ++ + +TF+ LL+ C GLV G + F+SM +GI P +EH+
Sbjct: 527 QAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHY 586
Query: 444 TCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQP 503
TC++ LLGRAG+L +A ++ P +V LLS+C + ++V +G A+++ ++P
Sbjct: 587 TCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEP 646
Query: 504 TTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHS 563
+ YVLLSN+YA+ G VA RK +++ G++K P S +E++G F+V H
Sbjct: 647 QDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHP 706
Query: 564 KIGEINYMLKTLSL 577
+ IN ML+ L+L
Sbjct: 707 DMRVINAMLEWLNL 720
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 218/456 (47%), Gaps = 26/456 (5%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGI--QPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
L C + G ++H V++ G + D+ +N +LN+Y K G + AR++FD M ER
Sbjct: 66 LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPER 125
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQQIH 123
N+VS+ ++ H Q G+ A F ++ N+++ + + + + +H
Sbjct: 126 NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVH 185
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ + K G+ +FVG+ LI Y SDA V+ + V + A+++ + EN PE
Sbjct: 186 SCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPE 245
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
F A + ++S R+G +H +K ++ P VG ++
Sbjct: 246 NAFRC----------------AQSCSLLAISC-ARQG--IHGCAIKTLNDTEPHVGGALL 286
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K I +A AF +I D+I + I+ + E+ +F + V P++
Sbjct: 287 DMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRS-SVLPNE 345
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
++ +S+L AC + + GKQIH H I++ D+ VGNAL++ YAKC + S K+F+
Sbjct: 346 YSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSS 405
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
+ N VSWNTI+ + LG AL +F +M+A + VT+ +L AC ++
Sbjct: 406 LRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHA 465
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
S+EK+ + D LID + G + +A
Sbjct: 466 GQIHCSIEKST-FNNDTVIGNSLIDTYAKCGYIRDA 500
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 3/223 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+SS+L C+ L G +H +K+G + D+ V N +++ YAKC M + K+F +
Sbjct: 347 SLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL 406
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL--LP-NEYIFASAISACAGIQSLVKGQ 120
+ N VSW+ ++ G Q+G AL F +M +P + ++S + ACA S+
Sbjct: 407 RDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAG 466
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH K + + + +GNSLI Y K GY DAL V+ E +++S+NA+I+G+ +
Sbjct: 467 QIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHG 526
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMIL 223
Q E+F M + + + +F L +C + + G+ L
Sbjct: 527 QAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSL 569
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 9/125 (7%)
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRM----RLNQDVGVGNALVNMYAKCGLISCS 357
D F A L C + G+ +H H++R RL D+ N L+NMY K G ++ +
Sbjct: 58 DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRL--DLFCANVLLNMYGKLGPLASA 115
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDS---VTFIGLLTAC 414
+LF+ M RN+VS+ T++ AHA +A LF +++ G + + T + L A
Sbjct: 116 RRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAM 175
Query: 415 NHAGL 419
+ AGL
Sbjct: 176 DAAGL 180
>gi|297834340|ref|XP_002885052.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330892|gb|EFH61311.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 652
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 189/586 (32%), Positives = 314/586 (53%), Gaps = 17/586 (2%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGI---QPDVIVSNHVLNLYAKCGKMILAR 57
+A SI++L C++ K G +H +++ G P + S ++N+YAKCG M A
Sbjct: 59 VATSIATL-QRCAQRKDSVSGQQIHGFMVRKGFLDDSPRAVTS--LVNMYAKCGLMRRAV 115
Query: 58 KVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQ 114
VF SER++ ++A+ISG G L A++ + +M +LP++Y F S + ++
Sbjct: 116 LVFGG-SERDVFGYNALISGFVVNGSPLDAMDMYREMRAKGILPDKYTFPSLLKGSDAME 174
Query: 115 SLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE-PNLVSFNALI 173
+ +++HA + K G+ S +VG++L++ Y K DA V+ E + + V +NAL+
Sbjct: 175 -VSDVKKVHALAFKLGFVSDCYVGSALVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALV 233
Query: 174 AGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE 233
G+ + E VF M +G+ R + L +VS DL G +H L VK +
Sbjct: 234 NGYSHIFRFEDALIVFSKMREEGVAMSRHTITSVLSSFTVSGDLDNGRSIHGLAVKMGFD 293
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
S V N ++ LY K + EA F ++E+DL +WN+ + +C D++ L++F+ M
Sbjct: 294 SGIVVSNALIDLYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFETM 353
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM----RLNQDVGVGNALVNMYA 349
G+RPD T ++L C LAS++ G++IH ++I R + + + N+L++MY
Sbjct: 354 LCS-GIRPDIVTLTTVLPTCGRLASLKQGREIHGYMIASGLLNRKSSNGFIHNSLMDMYV 412
Query: 350 KCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
KCG + + +F+ M ++ SWN +I + G AL +F M G+KPD +TF+G
Sbjct: 413 KCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVG 472
Query: 410 LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLG 469
LL AC+H+G V EG + ME Y I P +H+ C+ID+LGRA KL EA + P+
Sbjct: 473 LLQACSHSGFVNEGRNFLAQMETLYNILPTSDHYACVIDMLGRADKLEEAYDLAISMPIC 532
Query: 470 QDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGAR 529
+P+V ++LS+CRL + + K+L+ L+P YVL+SN+Y + +V R
Sbjct: 533 DNPVVWRSILSSCRLHGNKDLAVVAGKRLYELEPEHCGVYVLMSNVYVEAKKYEEVLDVR 592
Query: 530 KMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+K+ +KK P S I +Q F + +H + I+ L L
Sbjct: 593 DTMKEQNVKKTPGCSWIGLQNGVHTFFTGDQTHPEFESIHGWLSLL 638
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 189/580 (32%), Positives = 320/580 (55%), Gaps = 10/580 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S++ C A+++G + A +L+ +++ +++LY +CG + A+ + + M +R
Sbjct: 265 SMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQR 324
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIH 123
++V+W+AM++ Q G++ A+ +M + N+ + S + ACA +++L +G++IH
Sbjct: 325 DVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIH 384
Query: 124 AYSLKFGYASISF-VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
A L G VGNS+I+MY K G + A+ V+ + VS+NA+I V N +
Sbjct: 385 ARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKF 444
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF-VGNT 241
+ E+F M +GL + F+ LE C DL+ +H N VGN+
Sbjct: 445 QDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNS 504
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY--EKGLSVFKEMSNDHGV 299
++ +Y++ + +A+KAF +EEK L++W+ +AA + D + F+EM + G+
Sbjct: 505 VVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAE-GI 563
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCSY 358
+P + TF S L ACA +A+++HG+ +H + + +GN ++NMY KCG S +
Sbjct: 564 KPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAK 623
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+F++M + ++SWN++I A+A++ AL ++M G PDS T + +L +HAG
Sbjct: 624 LVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAG 683
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQ-DPIVLGT 477
L++ G +F S + +G+ P CL+DLL R G L AEE P Q D I T
Sbjct: 684 LLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMT 743
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL+AC+ D G R A+++F L+P + +V+L+NLYAS G W D + RKM++ +
Sbjct: 744 LLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMMERMSV 803
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
KKEP S IE+ G+ +F E H KI EI L+ L+L
Sbjct: 804 KKEPGCSWIELSGSVHEFISGESKHPKIREICEDLEKLTL 843
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 224/410 (54%), Gaps = 5/410 (1%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
L C+ + L G +H++V+ G+ ++I+SN ++N+Y KC + A KVFD M R++
Sbjct: 65 LDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDV 124
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAY 125
VSW+AM++ + Q G ALE S+M + PN+ F + + CA ++ L G++IH
Sbjct: 125 VSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHR 184
Query: 126 SLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKG 185
+ G +GN+L+ MY G D V+ + +++ + +IAG +N Q E+G
Sbjct: 185 IINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEG 244
Query: 186 FEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMAL 245
VF+ M +G+ + ++ +E+C + +++G ++ ++ S+ + ++++L
Sbjct: 245 LLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISL 304
Query: 246 YSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFT 305
Y + ++ A+ + ++D+++WN + AC+ D + + + + M + G + T
Sbjct: 305 YGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDME-GFGANKVT 363
Query: 306 FASILAACAGLASVQHGKQIHAH-LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
+ S+L ACA L ++ G++IHA L+ L ++V VGN+++ MY KCG + +F M
Sbjct: 364 YLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAM 423
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
++ VSWN +I A + AL+LF M+ G++ + T + LL AC
Sbjct: 424 PRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEAC 473
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/495 (25%), Positives = 245/495 (49%), Gaps = 19/495 (3%)
Query: 46 LYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYI 102
+Y KC ++ A VFD +S +N+ SW+ M++ + Q G + ALE F++M P++ +
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
F A+ ACA L G+QIH+ + G S + NSL++MY K A V+
Sbjct: 61 FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
++VS+ A++A + +N + E M +G+ P++ +F +++C+ L G
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
+H + LE + +GN ++ +Y + + F + + ++ W T IA CS
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQ 240
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
YE+GL VF++M + GV+ ++ T+ S++ C L +V+ G+ I A ++ +
Sbjct: 241 YEEGLLVFRKM-DLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLAT 299
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
+L+++Y +CG++ + L M R+VV+WN ++ A A + A+ L +M G
Sbjct: 300 SLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGA 359
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
+ VT++ +L AC + + +G + + ++ +I + G+ G+ A
Sbjct: 360 NKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSV 419
Query: 463 TKKFPLGQDPIVLGTLLSACRLRRDVVIGE---RLAKQLFH---LQPTTTSPYVLLSNLY 516
+ P +D + +++A +G + A +LFH L+ ++ + LLS L
Sbjct: 420 FEAMPR-KDDVSWNAVINAS-------VGNSKFQDALELFHGMELEGLRSNEFTLLSLLE 471
Query: 517 ASDGMWGDVAGARKM 531
A G+ D+ AR++
Sbjct: 472 ACGGL-EDLKLARQI 485
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 185/629 (29%), Positives = 310/629 (49%), Gaps = 77/629 (12%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
K+ SS+L C+ K+ G +H+ + + D + +++ YA CG + R+VFD
Sbjct: 99 TKTYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFD 158
Query: 62 EMS---------------------------------------------------ERNLVS 70
M +R+++S
Sbjct: 159 TMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVIS 218
Query: 71 WSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAIS---ACAGIQSLVKGQQIHAYSL 127
W++MISG+ G L + QM L + A+ IS CA +L G+ +H+ ++
Sbjct: 219 WNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAI 278
Query: 128 KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE 187
K + N+L+ MY K G AL V+ + E N+VS+ ++IAG+ + + + +
Sbjct: 279 KSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIK 338
Query: 188 VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYS 247
+ + M ++G+ D + L C+ S L G +H +ESN FV N +M +Y+
Sbjct: 339 LLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYA 398
Query: 248 KFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFA 307
K + A F + KD+ISWNT I ++PD T A
Sbjct: 399 KCGSMEAANSVFSTMVVKDIISWNTMIGE----------------------LKPDSRTMA 436
Query: 308 SILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR 367
+L ACA L++++ GK+IH +++R + D V NALV++Y KCG++ + LF+ + +
Sbjct: 437 CVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSK 496
Query: 368 NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYF 427
++VSW +IA + H G A+ F +M+ GI+PD V+FI +L AC+H+GL+++G +F
Sbjct: 497 DLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF 556
Query: 428 NSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRD 487
M+ + I P +EH+ C++DLL R G L +A E+ + P+ D + G LL CR D
Sbjct: 557 YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHD 616
Query: 488 VVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIE 547
+ + E++A+++F L+P + YVLL+N+YA W +V R+ + GL+K P S IE
Sbjct: 617 IELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIE 676
Query: 548 VQGTFEKFTVA-EFSHSKIGEINYMLKTL 575
++G F SH I +LK +
Sbjct: 677 IKGKVNLFVSGNNSSHPHSKNIESLLKKM 705
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 144/341 (42%), Gaps = 53/341 (15%)
Query: 166 LVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHC 225
+ +NA I F + E E+ M ++ L + +++ L++C+ G +H
Sbjct: 66 VTDYNAKILHFCQLGDLENAMELI-CMCKKSELETK-TYSSVLQLCAGLKSFTDGKKVHS 123
Query: 226 LTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEK 285
+ + + +G +++ Y+ + E + F +E+K++ WN ++ + D+++
Sbjct: 124 IIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKE 183
Query: 286 GLSVFKEMSND--HGVRP------------------------------------------ 301
+ +FK M G RP
Sbjct: 184 SICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMM 243
Query: 302 ------DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
D T S+L CA ++ GK +H+ I+ + + N L++MY+KCG +
Sbjct: 244 YLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLD 303
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ ++F +M RNVVSW ++IA + A+KL +QM+ G+K D V +L AC
Sbjct: 304 GALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACA 363
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+G + G+ + + K + ++ L+D+ + G +
Sbjct: 364 RSGSLDNGKDVHDYI-KANNMESNLFVCNALMDMYAKCGSM 403
>gi|414888053|tpg|DAA64067.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 754
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 182/557 (32%), Positives = 292/557 (52%), Gaps = 19/557 (3%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
LHA V + GI DV V N ++ YA+ + ARKVF+EM R+LVSW+A++ G Q GE
Sbjct: 179 LHALVSRAGIAADVFVGNALVTAYARGASLDAARKVFEEMPARDLVSWNALVCGLAQDGE 238
Query: 84 -HLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVG 138
+ F +M + P+ S ISAC G L G+QIH +++K G +
Sbjct: 239 CPAEVIRVFLRMLKHGGVRPDRISVCSVISACGGEGKLELGRQIHGFAVKLGIEGHVSIA 298
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL 198
N L++MY K G A ++ E ++VS+ ++ + E +F M+R G+
Sbjct: 299 NVLVAMYYKCGTPGCARRLFEFMGERDVVSWTTVM-----SMDREDAVSLFNGMMRDGVA 353
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKA 258
P+ +F L R+G ++H + +K L P N+ + +Y+K + +A+
Sbjct: 354 PNEVTFVAILSAMPGHCPAREGQMVHAVCIKTGLSDKPAAANSFITMYAKLRRMDDAKMI 413
Query: 259 FRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
F L+ ++I+WN I+ + + L F M +P + TFASIL+A + +
Sbjct: 414 FGLMPHPEVIAWNALISGYAQNEMCQDALEAFLSMVKI--TKPSETTFASILSAVTAVET 471
Query: 319 VQ--HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
V +G+ H +++ L V AL+++YAK G + S+K F E +HR++++W II
Sbjct: 472 VSMAYGQMYHCQTLKLGLGASEYVSGALIDLYAKRGSLEESWKAFGETVHRSLIAWTAII 531
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
+A++ H + LF M +G+ PD V + +LTAC ++G G F SM +G
Sbjct: 532 SANSKHGNYDGVVSLFNDMARSGVTPDGVVLLSVLTACRYSGFASLGREIFESMATKHGA 591
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAK 496
EH+ C++D+LGRAG+L EAEE + P G + +LL ACR+ + +GER+A
Sbjct: 592 ELWPEHYACVVDMLGRAGRLEEAEELMLQMPSGPSVSAMQSLLGACRIHGNTDVGERVAG 651
Query: 497 QLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGT----- 551
L +PT + YVLLSN+YA G WG VA R+ ++ G+KKE +S ++ G
Sbjct: 652 VLLETEPTESGAYVLLSNIYAEKGDWGAVARVRRKMRGMGVKKEVGFSWVDAGGANDSLH 711
Query: 552 FEKFTVAEFSHSKIGEI 568
KF+ + +H + EI
Sbjct: 712 LHKFSSDDTTHPQREEI 728
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 214/453 (47%), Gaps = 24/453 (5%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
+LHA + G+ V+N + YAK A +VF R+ S++ ++S
Sbjct: 79 ALHALAVISGLAAFAPVTNSLAARYAKGNSFAAAARVFAAAPSRDTSSYNTILSATPDPD 138
Query: 83 EHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVG 138
+ AL F ++M + P+ F +S AG +Q+HA + G A+ FVG
Sbjct: 139 D---ALAFAARMLRAGDVRPDAITFTVTLSLAAGRGEGRLVRQLHALVSRAGIAADVFVG 195
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ-PEKGFEVFKLMLRQ-G 196
N+L++ Y + A V+ E +LVS+NAL+ G ++ + P + VF ML+ G
Sbjct: 196 NALVTAYARGASLDAARKVFEEMPARDLVSWNALVCGLAQDGECPAEVIRVFLRMLKHGG 255
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
+ PDR S + C L G +H VK +E + + N ++A+Y K G A
Sbjct: 256 VRPDRISVCSVISACGGEGKLELGRQIHGFAVKLGIEGHVSIANVLVAMYYKCGTPGCAR 315
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
+ F + E+D++SW T ++ D E +S+F M D GV P++ TF +IL+A G
Sbjct: 316 RLFEFMGERDVVSWTTVMS-----MDREDAVSLFNGMMRD-GVAPNEVTFVAILSAMPGH 369
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
+ G+ +HA I+ L+ N+ + MYAK + + +F M H V++WN +I
Sbjct: 370 CPAREGQMVHAVCIKTGLSDKPAAANSFITMYAKLRRMDDAKMIFGLMPHPEVIAWNALI 429
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK--EGEAYF-NSMEKT 433
+ +A + + AL+ F M KP TF +L+A V G+ Y +++
Sbjct: 430 SGYAQNEMCQDALEAFLSMVKI-TKPSETTFASILSAVTAVETVSMAYGQMYHCQTLKLG 488
Query: 434 YGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
G S + LIDL + G L EE K F
Sbjct: 489 LGASEYVS--GALIDLYAKRGSL---EESWKAF 516
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 176/329 (53%), Gaps = 16/329 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+ S++ C L+ G +H +K+GI+ V ++N ++ +Y KCG AR++F+ M
Sbjct: 262 SVCSVISACGGEGKLELGRQIHGFAVKLGIEGHVSIANVLVAMYYKCGTPGCARRLFEFM 321
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
ER++VSW+ ++S + A+ F+ M + PNE F + +SA G +GQ
Sbjct: 322 GERDVVSWTTVMSMDRED-----AVSLFNGMMRDGVAPNEVTFVAILSAMPGHCPAREGQ 376
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+HA +K G + NS I+MY K+ DA +++G P ++++NALI+G+ +N+
Sbjct: 377 MVHAVCIKTGLSDKPAAANSFITMYAKLRRMDDAKMIFGLMPHPEVIAWNALISGYAQNE 436
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSV--SNDLRKGMILHCLTVKCKLESNPFV 238
+ E F M++ P +FA L + + + G + HC T+K L ++ +V
Sbjct: 437 MCQDALEAFLSMVKI-TKPSETTFASILSAVTAVETVSMAYGQMYHCQTLKLGLGASEYV 495
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++ LY+K + E+ KAF + LI+W I+A S +Y+ +S+F +M+ G
Sbjct: 496 SGALIDLYAKRGSLEESWKAFGETVHRSLIAWTAIISANSKHGNYDGVVSLFNDMARS-G 554
Query: 299 VRPDDFTFASILAAC--AGLASVQHGKQI 325
V PD S+L AC +G AS+ G++I
Sbjct: 555 VTPDGVVLLSVLTACRYSGFASL--GREI 581
>gi|224121748|ref|XP_002330643.1| predicted protein [Populus trichocarpa]
gi|222872247|gb|EEF09378.1| predicted protein [Populus trichocarpa]
Length = 777
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 178/508 (35%), Positives = 295/508 (58%), Gaps = 13/508 (2%)
Query: 8 LLHHCSKTKAL----QQGISLHAAVLKMGI-QPDVIVSNHVLNLYAKCGKMILARKVFDE 62
LL C++ L ++G +H ++ G+ V V N ++N+YAKCG + AR VF
Sbjct: 257 LLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGL 316
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
M +++ VSW++MI+G Q A++ ++ M L+P+ + SA+S+CA + ++ G
Sbjct: 317 MVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFTLISALSSCASLGCILLG 376
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
QQ H +K G V N+L+++Y + G+ ++ V+ E + VS+N +I ++
Sbjct: 377 QQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFSWMLERDQVSWNTVIGALADS 436
Query: 180 -QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ EVF M+R G P+R +F L S + + +H L +K ++ + +
Sbjct: 437 GASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAI 496
Query: 239 GNTIMALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
N ++A Y K + E+ F R+ E +D +SWN+ I+ H K + + M
Sbjct: 497 ENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNDLLCKAMDLVWLMMQ-R 555
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G R D FTFA++L+ACA +A+++ G ++HA IR L DV +G+ALV+MY+KCG I +
Sbjct: 556 GQRLDCFTFATVLSACATVATLERGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYA 615
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+ FN M RN+ SWN++I+ +A H G +AL+LF +MK +G PD +TF+G+L+AC+H
Sbjct: 616 SRFFNLMPMRNLYSWNSMISGYARHGYGDNALRLFTRMKLSGQLPDHITFVGVLSACSHI 675
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV EG YF SM + YG+ P +EH++C++DLLGRAG+L + + + K P+ + ++ T
Sbjct: 676 GLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIDNFINKMPIKPNILIWRT 735
Query: 478 LLSACRL--RRDVVIGERLAKQLFHLQP 503
+L AC R +G R A+ LF++ P
Sbjct: 736 VLGACCRGNGRKTELGRRAAEMLFNMDP 763
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 144/481 (29%), Positives = 238/481 (49%), Gaps = 19/481 (3%)
Query: 17 ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAK-CGKMILARKVFDEMSERNLVSWSAMI 75
LQ G+ +H +LK D + N ++++Y K G + AR VFDE+ RN + W++++
Sbjct: 58 GLQLGMQIHGLILKSPYANDASLCNVLISMYGKYLGYIDYARSVFDEIEIRNSIYWNSIV 117
Query: 76 SGHHQAGEHLLALEFFSQMH-------LLPNEYIFASAIS-ACAGIQS-LVKGQQIHAYS 126
S + Q G+ E FS M L PNEY F S I+ AC+ + S L QI A
Sbjct: 118 SVYSQRGDAASCFELFSSMQMADSGLSLKPNEYTFGSLITAACSSVDSGLSLLGQILARI 177
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
K G + +VG++L + ++G A ++ + N VS N L+ G V + E+
Sbjct: 178 KKSGLLANLYVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAV 237
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICS----VSNDLRKGMILHCLTVKCKL-ESNPFVGNT 241
EVFK R + + S+ L C+ + RKG +H ++ L ++ VGN
Sbjct: 238 EVFK-ETRHLVDINVDSYVILLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNG 296
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y+K I A F L+ +KD +SWN+ I +E + + M G+ P
Sbjct: 297 LINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKT-GLMP 355
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
+FT S L++CA L + G+Q H I++ L+ DV V N L+ +YA+ G ++ K+F
Sbjct: 356 SNFTLISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVF 415
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGS-ALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
+ ML R+ VSWNT+I A A+ S A+++F +M G P+ VTFI LL +
Sbjct: 416 SWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTS 475
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
K +++ Y + D L+ G++G++ EE + +D + +++S
Sbjct: 476 KLSHQ-IHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMIS 534
Query: 481 A 481
Sbjct: 535 G 535
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 208/436 (47%), Gaps = 21/436 (4%)
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISAC--AGIQSLV 117
M +RN V+W+ +ISG+ Q G A +M LPN + F SAI AC + + L
Sbjct: 1 MPDRNGVTWACLISGYTQNGMPDDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLCGLQ 60
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMK-VGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G QIH LK YA+ + + N LISMY K +GY A V+ E N + +N++++ +
Sbjct: 61 LGMQIHGLILKSPYANDASLCNVLISMYGKYLGYIDYARSVFDEIEIRNSIYWNSIVSVY 120
Query: 177 VENQQPEKGFEVFKLMLRQ----GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV--KC 230
+ FE+F M L P+ ++F + S D ++ L K
Sbjct: 121 SQRGDAASCFELFSSMQMADSGLSLKPNEYTFGSLITAACSSVDSGLSLLGQILARIKKS 180
Query: 231 KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVF 290
L +N +VG+ + +S+ A K F + ++ +S N + E+ + VF
Sbjct: 181 GLLANLYVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAVEVF 240
Query: 291 KEMSNDHGVRPDDFTFASILAACAGLASV----QHGKQIHAHLIRMRLNQ-DVGVGNALV 345
KE + + D + +L+ACA A + + G+++H + IR LN V VGN L+
Sbjct: 241 KETRHLVDINVDSYVI--LLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGLI 298
Query: 346 NMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV 405
NMYAKCG I + +F M+ ++ VSWN++I ++ A+K + M+ TG+ P +
Sbjct: 299 NMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNF 358
Query: 406 TFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKK 465
T I L++C G + G+ K G+ D+ L+ L G L E ++
Sbjct: 359 TLISALSSCASLGCILLGQQTHGEGIK-LGLDMDVSVSNTLLALYAETGHLAECQK-VFS 416
Query: 466 FPLGQDPIVLGTLLSA 481
+ L +D + T++ A
Sbjct: 417 WMLERDQVSWNTVIGA 432
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 191/382 (50%), Gaps = 8/382 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S L C+ + G H +K+G+ DV VSN +L LYA+ G + +KVF M
Sbjct: 359 TLISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFSWM 418
Query: 64 SERNLVSWSAMISGHHQAGEHLL-ALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
ER+ VSW+ +I +G + A+E F +M PN F + ++ + + +
Sbjct: 419 LERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLS 478
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE-PNLVSFNALIAGFVE 178
QIHA LK+ + + N+L++ Y K G + ++ E + VS+N++I+G++
Sbjct: 479 HQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIH 538
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N K ++ LM+++G D F+FA L C+ L +GM +H ++ LES+ +
Sbjct: 539 NDLLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLERGMEVHACAIRACLESDVVI 598
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
G+ ++ +YSK I A + F L+ ++L SWN+ I+ + + L +F M G
Sbjct: 599 GSALVDMYSKCGRIDYASRFFNLMPMRNLYSWNSMISGYARHGYGDNALRLFTRMKLS-G 657
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCS 357
PD TF +L+AC+ + V G + + + L V + +V++ + G +
Sbjct: 658 QLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKI 717
Query: 358 YKLFNEM-LHRNVVSWNTIIAA 378
N+M + N++ W T++ A
Sbjct: 718 DNFINKMPIKPNILIWRTVLGA 739
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 206/634 (32%), Positives = 318/634 (50%), Gaps = 76/634 (11%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM--SERNLVSWSAMI 75
L ++ AA+ + P + + ++ +A G++ A FD + + R+ V +AM+
Sbjct: 75 LSPDLATPAALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMM 134
Query: 76 SGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQ--QIHAYSLKF 129
S +A A+ F + L P++Y F + ISA + +L Q+H LK
Sbjct: 135 SAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKS 194
Query: 130 GYASISFVGNSLISMYMK-----------------------------VGY-----SSDAL 155
G A++ V N+LI++YMK VGY + A
Sbjct: 195 GAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAAR 254
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN 215
V+ E V +NA+I+G+V++ FE+F+ M+ + + D F+F L C+ +
Sbjct: 255 SVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAG 314
Query: 216 DLRKGMILHCLTVKCKLESNP----FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
G +H ++ + P V N ++ LYSK I A++ F + KD++SWN
Sbjct: 315 FFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWN 374
Query: 272 TFIAACSHCADYEKGLSVFKEMS--ND-----------HG-----------------VRP 301
T ++ +K + VFK M ND HG V+P
Sbjct: 375 TILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKP 434
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D+T+A +AAC L +++HG+Q+HAHL++ GNAL+ MYAKCG ++ + +F
Sbjct: 435 CDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVF 494
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
M + + VSWN +I+A H G AL+LF+QM A GI PD ++F+ +LTACNHAGLV
Sbjct: 495 LVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVD 554
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
EG YF SM++ +GISP +H+ LIDLLGR+G++ EA + K P P + +LS
Sbjct: 555 EGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSG 614
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
CR D+ G A QLF + P Y+LLSN Y++ G W D A RK+++D G+KKEP
Sbjct: 615 CRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEP 674
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S IEV F V + H + E+ L+ +
Sbjct: 675 GCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVI 708
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 13/208 (6%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C + AL+ G LHA +++ G + N +L +YAKCG + AR VF M + VSW
Sbjct: 446 CGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSW 505
Query: 72 SAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG-QQIHAYSL 127
+AMIS Q G ALE F QM + P+ F + ++AC + +G +
Sbjct: 506 NAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKR 565
Query: 128 KFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
FG + LI + + G +A L+ FEP + A+++G N E G
Sbjct: 566 DFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGA 625
Query: 187 ----EVFKLMLRQG----LLPDRFSFAG 206
++F+++ + LL + +S AG
Sbjct: 626 YAADQLFRMIPQHDGTYILLSNTYSAAG 653
>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g01580
gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 175/575 (30%), Positives = 316/575 (54%), Gaps = 6/575 (1%)
Query: 9 LHHCSKTKALQQGISLHAAVLK-MGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
L C + + + G +H V K + + D+ V + ++ +Y KCG+MI A ++FDE+ + +
Sbjct: 67 LKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPD 126
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIH 123
+V+WS+M+SG + G A+EFF +M + P+ + +SAC + + G+ +H
Sbjct: 127 IVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVH 186
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ ++ G+++ + NSL++ Y K +A+ ++ E +++S++ +IA +V+N
Sbjct: 187 GFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAA 246
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ VF M+ G P+ + L+ C+ ++DL +G H L ++ LE+ V ++
Sbjct: 247 EALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALV 306
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y K EA F I KD++SW I+ + + + F M ++ RPD
Sbjct: 307 DMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDA 366
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
+L +C+ L ++ K H+++I+ + + +G +LV +Y++CG + + K+FN
Sbjct: 367 ILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNG 426
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTACNHAGLVKE 422
+ ++ V W ++I + H G AL+ F M K++ +KP+ VTF+ +L+AC+HAGL+ E
Sbjct: 427 IALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHE 486
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G F M Y ++P++EH+ L+DLLGR G L A E TK+ P P +LGTLL AC
Sbjct: 487 GLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGAC 546
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
R+ ++ + E +AK+LF L+ Y+L+SN+Y G W +V R +K G+KK +
Sbjct: 547 RIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLA 606
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
S+IE++ +F + H + + +LK L L
Sbjct: 607 ESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDL 641
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 222/432 (51%), Gaps = 9/432 (2%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAG 112
AR++F EM++R+L W+ ++ + + L FS M P+ + A+ AC
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 113 IQSLVKGQQIHAYSLK-FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNA 171
++ + G+ IH + K S +VG+SLI MY+K G +AL ++ E +P++V++++
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 172 LIAGFVENQQPEKGFEVFKLM-LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC 230
+++GF +N P + E F+ M + + PDR + + C+ ++ R G +H ++
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 231 KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVF 290
++ + N+++ Y+K EA F++I EKD+ISW+T IA + L VF
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252
Query: 291 KEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
+M +D G P+ T +L ACA ++ G++ H IR L +V V ALV+MY K
Sbjct: 253 NDMMDD-GTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMK 311
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-KATGIKPDSVTFIG 409
C +Y +F+ + ++VVSW +I+ + + +++ F M +PD++ +
Sbjct: 312 CFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVK 371
Query: 410 LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLG 469
+L +C+ G +++ + F+S YG + L++L R G L A + L
Sbjct: 372 VLGSCSELGFLEQAKC-FHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIAL- 429
Query: 470 QDPIVLGTLLSA 481
+D +V +L++
Sbjct: 430 KDTVVWTSLITG 441
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 203/461 (44%), Gaps = 35/461 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ +L+ C+K + G +H V++ G D+ + N +LN YAK A +F +
Sbjct: 165 TLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI 224
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+E++++SWS +I+ + Q G AL F+ M PN + ACA L +G+
Sbjct: 225 AEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGR 284
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+ H +++ G + V +L+ MYMK +A V+ ++VS+ ALI+GF N
Sbjct: 285 KTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNG 344
Query: 181 QPEKGFEVFKLM-LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ E F +M L PD L CS L + H +K +SNPF+G
Sbjct: 345 MAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIG 404
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+++ LYS+ +G A K F I KD + W + I K L F M V
Sbjct: 405 ASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEV 464
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIR-MRLNQDVGVGNALVNMYAKCGLISCSY 358
+P++ TF SIL+AC+ + G +I ++ RL ++ LV++ + G + +
Sbjct: 465 KPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAI 524
Query: 359 KLFNEMLHRNVVS-WNTIIAA---HANHRLGGS-ALKLFEQMKATGIKPDSVTFIGLLTA 413
++ M T++ A H N + + A KLFE
Sbjct: 525 EITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFE------------------LE 566
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
NHAG Y+ M YG+ + E+ L + + + G
Sbjct: 567 SNHAG-------YYMLMSNVYGVKGEWENVEKLRNSVKQRG 600
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 158/322 (49%), Gaps = 2/322 (0%)
Query: 147 KVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAG 206
K S DA ++GE + +L +N L+ +Q E+ F M R PD F+
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 207 GLEICSVSNDLRKGMILHCLTVK-CKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK 265
L+ C ++ G ++H K L S+ +VG++++ +Y K + EA + F +E+
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 266 DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
D+++W++ ++ + + F+ M V PD T ++++AC L++ + G+ +
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
H +IR + D+ + N+L+N YAK + LF + ++V+SW+T+IA + +
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAA 245
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
AL +F M G +P+ T + +L AC A +++G + + G+ +++ T
Sbjct: 246 AEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKT-HELAIRKGLETEVKVSTA 304
Query: 446 LIDLLGRAGKLLEAEEYTKKFP 467
L+D+ + EA + P
Sbjct: 305 LVDMYMKCFSPEEAYAVFSRIP 326
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 96/175 (54%), Gaps = 3/175 (1%)
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
M KF+ +A + F + ++ L WNT + + S +E+ L F M D +PD
Sbjct: 1 MGFCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEE-KPD 59
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIR-MRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
+FT L AC L V +G+ IH + + + L D+ VG++L+ MY KCG + + ++F
Sbjct: 60 NFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMF 119
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTACN 415
+E+ ++V+W+++++ + A++ F +M A+ + PD VT I L++AC
Sbjct: 120 DELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
>gi|147801011|emb|CAN60119.1| hypothetical protein VITISV_016375 [Vitis vinifera]
Length = 711
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 181/541 (33%), Positives = 291/541 (53%), Gaps = 5/541 (0%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C KA +QG +H ++ G D+ ++ ++ Y K G +I AR VFD M ER++VSW
Sbjct: 161 CIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSW 220
Query: 72 SAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
+AM+SG+ Q G A FS M + N++ + SA+ AC ++ L G Q+ K
Sbjct: 221 TAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQK 280
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
+ FV ++L+ + K G DA ++G E ++VS+NA+I G+ + F +
Sbjct: 281 GRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCM 340
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
F+ MLR GL+PD ++ L + L +H + + S V ++ Y+K
Sbjct: 341 FRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAK 400
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYE-KGLSVFKEMSNDHGVRPDDFTFA 307
+ A+ + + +KDL S I +H Y L +FKEM N + DD
Sbjct: 401 NGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEM-NQMNIGMDDVILC 459
Query: 308 SILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR 367
S+L CA LAS G QIHA ++ + + DV +GNAL++MYAK G I + + F+EM +
Sbjct: 460 SMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEK 519
Query: 368 NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYF 427
NV+SW ++I+ +A H G A+ L+++M++ G KP+ VTF+ LL AC+H GL EG F
Sbjct: 520 NVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECF 579
Query: 428 NSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRD 487
N+M Y I P EH++C++DL R G L EA K + + + G +L A +
Sbjct: 580 NNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGY 639
Query: 488 VVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIE 547
+ +G+ A LF++QP + YV+L+++Y++ G+W D RK++++ KK YS +
Sbjct: 640 MSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSFFQ 699
Query: 548 V 548
Sbjct: 700 A 700
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 199/422 (47%), Gaps = 14/422 (3%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S L C+ + L GI + + K ++ V + +++ ++KCGKM A +F M ER
Sbjct: 257 SALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMER 316
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
++VSW+AMI G+ G + F M L+P+ Y S + A A L+ QIH
Sbjct: 317 DVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIH 376
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV-ENQQP 182
+ GY S V LI+ Y K G A + + +L S ALI G+ E
Sbjct: 377 GIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYS 436
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
++FK M + + D L IC+ G +H +K + + +GN +
Sbjct: 437 VDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNAL 496
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y+K I +A++AF +EEK++ISW + I+ + +S++K+M + G +P+
Sbjct: 497 IDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMES-KGFKPN 555
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLI-RMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D TF S+L AC+ G + +++ + + + +V+++A+ GL+ +Y L
Sbjct: 556 DVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLL 615
Query: 362 NEM-LHRNVVSWNTIIAAHANH---RLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++ + N W I+ A + + LG A M+ +SV ++ L + + A
Sbjct: 616 CKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQP----ENSVNYVVLASIYSAA 671
Query: 418 GL 419
GL
Sbjct: 672 GL 673
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 1/209 (0%)
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
+C ++G ++H + S+ + ++ Y K + A F + E+ ++S
Sbjct: 160 LCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVS 219
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
W ++ S +EK +F +M + GV+ + FT+ S L AC L + G Q+ +
Sbjct: 220 WTAMVSGYSQNGRFEKAFVLFSDMRH-CGVKANQFTYGSALRACTSLRCLDMGIQVQGCI 278
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
+ R +++ V +ALV+ ++KCG + + LF M+ R+VVSWN +I +A +
Sbjct: 279 QKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSF 338
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+F M G+ PD T +L A G
Sbjct: 339 CMFRSMLRGGLVPDCYTLGSVLRASAEGG 367
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 115/213 (53%), Gaps = 4/213 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+L ++ L +H + ++G IV+ ++N YAK G + A+ + M
Sbjct: 355 TLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGM 414
Query: 64 SERNLVSWSAMISGH-HQAGEHLLALEFF---SQMHLLPNEYIFASAISACAGIQSLVKG 119
+++L S +A+I+G+ H+ + AL+ F +QM++ ++ I S ++ CA + S G
Sbjct: 415 LKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALG 474
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
QIHA++LK+ + +GN+LI MY K G DA + E E N++S+ +LI+G+ ++
Sbjct: 475 TQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKH 534
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
++K M +G P+ +F L CS
Sbjct: 535 GYGHMAVSLYKKMESKGFKPNDVTFLSLLFACS 567
>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
Length = 641
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 175/575 (30%), Positives = 316/575 (54%), Gaps = 6/575 (1%)
Query: 9 LHHCSKTKALQQGISLHAAVLK-MGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
L C + + + G +H V K + + D+ V + ++ +Y KCG+MI A ++FDE+ + +
Sbjct: 48 LKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPD 107
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIH 123
+V+WS+M+SG + G A+EFF +M + P+ + +SAC + + G+ +H
Sbjct: 108 IVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVH 167
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ ++ G+++ + NSL++ Y K +A+ ++ E +++S++ +IA +V+N
Sbjct: 168 GFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAA 227
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ VF M+ G P+ + L+ C+ ++DL +G H L ++ LE+ V ++
Sbjct: 228 EALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALV 287
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y K EA F I KD++SW I+ + + + F M ++ RPD
Sbjct: 288 DMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDA 347
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
+L +C+ L ++ K H+++I+ + + +G +LV +Y++CG + + K+FN
Sbjct: 348 ILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNG 407
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTACNHAGLVKE 422
+ ++ V W ++I + H G AL+ F M K++ +KP+ VTF+ +L+AC+HAGL+ E
Sbjct: 408 IALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHE 467
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G F M Y ++P++EH+ L+DLLGR G L A E TK+ P P +LGTLL AC
Sbjct: 468 GLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGAC 527
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
R+ ++ + E +AK+LF L+ Y+L+SN+Y G W +V R +K G+KK +
Sbjct: 528 RIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLA 587
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
S+IE++ +F + H + + +LK L L
Sbjct: 588 ESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDL 622
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 216/425 (50%), Gaps = 9/425 (2%)
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
M++R+L W+ ++ + + L FS M P+ + A+ AC ++ + G
Sbjct: 1 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60
Query: 120 QQIHAYSLK-FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+ IH + K S +VG+SLI MY+K G +AL ++ E +P++V+++++++GF +
Sbjct: 61 EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 120
Query: 179 NQQPEKGFEVFKLM-LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
N P + E F+ M + + PDR + + C+ ++ R G +H ++ ++
Sbjct: 121 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLS 180
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+ N+++ Y+K EA F++I EKD+ISW+T IA + L VF +M +D
Sbjct: 181 LVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDD- 239
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G P+ T +L ACA ++ G++ H IR L +V V ALV+MY KC +
Sbjct: 240 GTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEA 299
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTACNH 416
Y +F+ + ++VVSW +I+ + + +++ F M +PD++ + +L +C+
Sbjct: 300 YAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSE 359
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
G +++ + F+S YG + L++L R G L A + L +D +V
Sbjct: 360 LGFLEQAKC-FHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIAL-KDTVVWT 417
Query: 477 TLLSA 481
+L++
Sbjct: 418 SLITG 422
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 203/461 (44%), Gaps = 35/461 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ +L+ C+K + G +H V++ G D+ + N +LN YAK A +F +
Sbjct: 146 TLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI 205
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+E++++SWS +I+ + Q G AL F+ M PN + ACA L +G+
Sbjct: 206 AEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGR 265
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+ H +++ G + V +L+ MYMK +A V+ ++VS+ ALI+GF N
Sbjct: 266 KTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNG 325
Query: 181 QPEKGFEVFKLM-LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ E F +M L PD L CS L + H +K +SNPF+G
Sbjct: 326 MAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIG 385
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+++ LYS+ +G A K F I KD + W + I K L F M V
Sbjct: 386 ASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEV 445
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIR-MRLNQDVGVGNALVNMYAKCGLISCSY 358
+P++ TF SIL+AC+ + G +I ++ RL ++ LV++ + G + +
Sbjct: 446 KPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAI 505
Query: 359 KLFNEMLHRNVVS-WNTIIAA---HANHRLGGS-ALKLFEQMKATGIKPDSVTFIGLLTA 413
++ M T++ A H N + + A KLFE
Sbjct: 506 EITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFE------------------LE 547
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
NHAG Y+ M YG+ + E+ L + + + G
Sbjct: 548 SNHAG-------YYMLMSNVYGVKGEWENVEKLRNSVKQRG 581
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 158/470 (33%), Positives = 273/470 (58%), Gaps = 2/470 (0%)
Query: 99 NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY 158
+ + + + C + L++G+ +HA+ L+ + +GN+L++MY K G +A V+
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 159 GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLR 218
+ + + V++ LI+G+ ++ +P F MLR G P+ F+ + ++ +
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
G LH VKC +SN VG+ ++ LY+++ L+ +A+ F +E ++ +SWN IA +
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 279 HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
+ EK L +F+ M D G RP F++AS+ AC+ ++ GK +HA++I+
Sbjct: 239 RRSGTEKALELFQGMLRD-GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA 297
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
GN L++MYAK G I + K+F+ + R+VVSWN+++ A+A H G A+ FE+M+
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 399 GIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLE 458
GI+P+ ++F+ +LTAC+H+GL+ EG Y+ M+K GI P+ H+ ++DLLGRAG L
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNR 416
Query: 459 AEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYAS 518
A + ++ P+ + LL+ACR+ ++ +G A+ +F L P P+V+L N+YAS
Sbjct: 417 ALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYAS 476
Query: 519 DGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
G W D A RK +K+SG+KKEP+ S +E++ F + H + EI
Sbjct: 477 GGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEI 526
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 209/390 (53%), Gaps = 8/390 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
++LL C+ K L QG +HA +L+ + D+++ N +LN+YAKCG + ARKVF++M +
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQI 122
R+ V+W+ +ISG+ Q AL FF+QM PNE+ +S I A A + G Q+
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H + +K G+ S VG++L+ +Y + G DA LV+ N VS+NALIAG
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
EK E+F+ MLR G P FS+A CS + L +G +H +K + F GNT+
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 303
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y+K I +A K F + ++D++SWN+ + A + ++ + F+EM G+RP+
Sbjct: 304 LDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV-GIRPN 362
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+ +F S+L AC+ + G + + + + + +V++ + G ++ + +
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIE 422
Query: 363 EM-LHRNVVSWNTIIAA---HANHRLGGSA 388
EM + W ++ A H N LG A
Sbjct: 423 EMPIEPTAAIWKALLNACRMHKNTELGAYA 452
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 97/186 (52%), Gaps = 4/186 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S +SL CS T L+QG +HA ++K G + N +L++YAK G + ARK+FD +
Sbjct: 264 SYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL 323
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
++R++VSW+++++ + Q G A+ +F +M + PNE F S ++AC+ L +G
Sbjct: 324 AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGW 383
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGE-AFEPNLVSFNALIAGFVEN 179
+ K G ++ +++ + + G + AL E EP + AL+ +
Sbjct: 384 HYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 443
Query: 180 QQPEKG 185
+ E G
Sbjct: 444 KNTELG 449
>gi|297742226|emb|CBI34375.3| unnamed protein product [Vitis vinifera]
Length = 814
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 187/574 (32%), Positives = 311/574 (54%), Gaps = 6/574 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGI--QPDVIVSNHVLNLYAKCGKMILARKVFD 61
S++S+L S + +Q L +KMG+ + ++N ++N+Y++CG A K+FD
Sbjct: 222 SLTSVLGALSDVREGEQVFGLS---VKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKMFD 278
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQ 121
EM+E ++VSW+ I + A E ++ NEY+ + +SA + L G+Q
Sbjct: 279 EMTEPDVVSWTERIGAAYDAIEAFELFRLVLSGNMEVNEYMLINVLSAMREPKLLKSGRQ 338
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
I K GY ++ V N+LI MY K G A ++ E + VS+N+LIAG+ EN
Sbjct: 339 IQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAGYAENGL 398
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
++ +VF M L P++++ A LE+ + SN + M +H VK + + +
Sbjct: 399 MKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVKLGFIVDDSMLSC 458
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ Y K N+I E+++ + I + +++ N A H + L +F+ H
Sbjct: 459 LITAYGKCNMICESKRVYSDISQINVLHLNAMAATLVHAGCHADALKLFQTGWRLHQ-EV 517
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D T + +L AC L +++G+ IH+ ++ ++QD V +A++++Y KCG + + K F
Sbjct: 518 DCITLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEAAKTF 577
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ N+V+WN ++ +A H +LF +M GI+PD +T++G+L +C HAGLV
Sbjct: 578 MNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSCCHAGLVN 637
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
E Y +SM + +G+ P +EH+ C+IDL GR G L +A+ + P+ D + LLS
Sbjct: 638 EAHTYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMPIMPDAQIWQILLSG 697
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
C + +V +GE AK+L LQP S YVLLSNLYAS G W V R+++K + KEP
Sbjct: 698 CNIHGNVDLGEVAAKKLIELQPENDSAYVLLSNLYASAGRWNAVGKLRRVMKKKIICKEP 757
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S I+V+G+ F ++ SH + EI L+ L
Sbjct: 758 GSSWIQVRGSVHYFFASDTSHPESKEIYMKLQRL 791
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/448 (27%), Positives = 215/448 (47%), Gaps = 27/448 (6%)
Query: 25 HAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEH 84
+A LK G D +S+ ++N +A G AR+ + + VSW+++ISG+ + +
Sbjct: 43 YALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTPYPDTVSWNSLISGYARFRQP 102
Query: 85 LLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSL 141
+ F+ + L P+E+ +S + C ++ + + H LK G + FV + L
Sbjct: 103 GPVFDLFNGLRRSGLSPDEFSLSSLVKGCGVLE---QNEVAHGVCLKMGLLN-GFVVSGL 158
Query: 142 ISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM--LRQGLLP 199
+ Y K+G A + E + + V + A++ GFV N + EKG EVF M L GL
Sbjct: 159 LDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGLGLEL 218
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVK------CKLESNPFVGNTIMALYSKFNLIG 253
+ FS L S D+R+G + L+VK C + N N +M +YS+
Sbjct: 219 NEFSLTSVLGALS---DVREGEQVFGLSVKMGLLCGCSIHLN----NALMNMYSRCGSKS 271
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
+A K F + E D++SW I A D + +F+ + + + + +++ ++L+A
Sbjct: 272 DAIKMFDEMTEPDVVSWTERIGAAY---DAIEAFELFRLVLSGN-MEVNEYMLINVLSAM 327
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
++ G+QI + V NAL+ MY KCG + + +F+EML + VSWN
Sbjct: 328 REPKLLKSGRQIQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWN 387
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT 433
++IA +A + L ALK+F QM+ ++P+ T +L ++ ++ + + K
Sbjct: 388 SLIAGYAENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVKL 447
Query: 434 YGISPDIEHFTCLIDLLGRAGKLLEAEE 461
G D +CLI G+ + E++
Sbjct: 448 -GFIVDDSMLSCLITAYGKCNMICESKR 474
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 16/363 (4%)
Query: 102 IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA 161
++ A+ A A + Q +A LK G+A +F+ + +++ + G + A +
Sbjct: 22 LYPQALRASASLLHPPLTDQSYALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDT 81
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
P+ VS+N+LI+G+ +QP F++F + R GL PD FS + ++ C V L +
Sbjct: 82 PYPDTVSWNSLISGYARFRQPGPVFDLFNGLRRSGLSPDEFSLSSLVKGCGV---LEQNE 138
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
+ H + +K L N FV + ++ Y+K + AEK F+ D + W +
Sbjct: 139 VAHGVCLKMGL-LNGFVVSGLLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNG 197
Query: 282 DYEKGLSVFKEMSN-DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRL--NQDV 338
++EKG VF EM G+ ++F+ S+L A L+ V+ G+Q+ ++M L +
Sbjct: 198 EFEKGREVFVEMRGLGLGLELNEFSLTSVLGA---LSDVREGEQVFGLSVKMGLLCGCSI 254
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
+ NAL+NMY++CG S + K+F+EM +VVSW I A + A +LF + +
Sbjct: 255 HLNNALMNMYSRCGSKSDAIKMFDEMTEPDVVSWTERIGAAYD---AIEAFELFRLVLSG 311
Query: 399 GIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT-YGISPDIEHFTCLIDLLGRAGKLL 457
++ + I +L+A L+K G +K Y + + + LI + G+ G+++
Sbjct: 312 NMEVNEYMLINVLSAMREPKLLKSGRQIQGLCQKAGYLLVASVNN--ALIFMYGKCGEMV 369
Query: 458 EAE 460
A
Sbjct: 370 AAR 372
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 173/548 (31%), Positives = 299/548 (54%), Gaps = 5/548 (0%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
++A +L G+Q + ++N + G++ ARK+FD+ + ++ W+A++ + + G
Sbjct: 94 IYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGF 153
Query: 84 HLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
A+E +++M + P+ + F + AC+ + +L G+++H + G+ S FV N
Sbjct: 154 FGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNG 213
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
L+++Y K G A V+G + +VS+ ++I+G+ +N QP + +F M + + PD
Sbjct: 214 LVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPD 273
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+ L + DL G +H +K LE + ++ +LY+K + A F
Sbjct: 274 WIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFN 333
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+E LI WN I+ E+ + +F+ M + + +RPD T S +AACA + S++
Sbjct: 334 QVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKN-IRPDSITVTSSIAACAQIGSLE 392
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
+ + ++ DV V +L++ YAKCG + + +F+ + ++VV W+ ++ +
Sbjct: 393 LARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYG 452
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
H G ++ LF M+ G+ P+ VTF+GLLTAC ++GLV+EG F+ M + YGI P
Sbjct: 453 LHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM-RDYGIEPRH 511
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH 500
+H+ C++DLLGRAG L A + P+ V G LLSAC++ R V +GE A++LF
Sbjct: 512 QHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFS 571
Query: 501 LQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEF 560
L P T YV LSNLYAS +W VA R ++++ GL K YS+IE+ G + F +
Sbjct: 572 LDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDK 631
Query: 561 SHSKIGEI 568
+H + EI
Sbjct: 632 THPRSKEI 639
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 188/390 (48%), Gaps = 17/390 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S +L CS AL+ G +H + + G + DV V N ++ LYAKCG+++ A VF +
Sbjct: 175 SFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRL 234
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+R +VSW+++ISG+ Q G+ + AL FS+M ++ P+ S + A ++ L G+
Sbjct: 235 VDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGK 294
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IH +K G + SL S+Y K G+ A L + + P+L+ +NA+I+G+V+N
Sbjct: 295 SIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNG 354
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E+ E+F+LM + + PD + + C+ L + + ++ V
Sbjct: 355 YAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNT 414
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ Y+K + A F I +KD++ W+ + + + +F M GV
Sbjct: 415 SLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQA-GVS 473
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN------ALVNMYAKCGLI 354
P+D TF +L AC V+ G + RMR D G+ +V++ + G +
Sbjct: 474 PNDVTFVGLLTACKNSGLVEEGWDL---FHRMR---DYGIEPRHQHYACVVDLLGRAGHL 527
Query: 355 SCSYK-LFNEMLHRNVVSWNTIIAAHANHR 383
+Y + N + V W +++A HR
Sbjct: 528 DRAYNFVMNMPIEPGVSVWGALLSACKIHR 557
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 174/363 (47%), Gaps = 9/363 (2%)
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
QI+A L G F+ L++ +G S A ++ + +P++ +NA++ + +
Sbjct: 92 NQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRH 151
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
E++ M + PD FSF L+ CS L G +H + ES+ FV
Sbjct: 152 GFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQ 211
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N ++ALY+K I A F + ++ ++SW + I+ + + L +F EM + V
Sbjct: 212 NGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTN-V 270
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
RPD S+L A + ++HGK IH +I+M L + + +L ++YAKCG + +
Sbjct: 271 RPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARL 330
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG- 418
FN++ + +++ WN +I+ + + A++LF MK+ I+PDS+T + AC G
Sbjct: 331 FFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGS 390
Query: 419 --LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
L + + Y + E D+ T LID + G + A + P +D +V
Sbjct: 391 LELARWMDEYISMSE----FRNDVIVNTSLIDTYAKCGSVDMARFVFDRIP-DKDVVVWS 445
Query: 477 TLL 479
++
Sbjct: 446 AMM 448
>gi|147834193|emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]
Length = 826
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 182/533 (34%), Positives = 298/533 (55%), Gaps = 10/533 (1%)
Query: 26 AAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHL 85
+V+K+G + +V V+ ++ Y+ M + K+F++ ++LV WSAM+S ++G++
Sbjct: 113 GSVIKLGFESEVSVATALIGFYSDY-DMGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYG 171
Query: 86 LALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLI 142
A E F M + PN S + ACA + +L+ G++IH +S+K + ++ V NSL+
Sbjct: 172 EAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLV 231
Query: 143 SMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRF 202
MY K ++LV+ + E +L+S+ +I G +EN P + F+ F M D
Sbjct: 232 DMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADE- 290
Query: 203 SFAGGLEICSVSNDLRK-GMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRL 261
+ L + + D K G+ H +K L + +G ++ +Y+KF + A F
Sbjct: 291 TIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQ 350
Query: 262 IEEKDLISWNTFIAACSHCADYEKGLSVFKEM-SNDHGVRPDDFTFASILAACAGLASVQ 320
+ +KD ISW+ I+ +H L FK+M S D RP++ TF S+L AC+ + + +
Sbjct: 351 LNKKDYISWSAMISVHAHSRHPYNALETFKQMQSTDE--RPNEITFVSLLQACSLIGAQE 408
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G+ I AH + + + +AL+++Y K G I+ +FNE+ +++V W+++I +
Sbjct: 409 LGESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSSMINGYG 468
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
+ G AL+ F M A G+KP+ V FI +L+AC+H GL EG + F+SME+ YGI P +
Sbjct: 469 LNGCGDEALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKL 528
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACR-LRRDVVIGERLAKQLF 499
H+ C++DL+ R G + A ++ K P+ D + G LL+ CR + I E +A++L
Sbjct: 529 PHYACMVDLISRRGNIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGSIEIAELVAERLI 588
Query: 500 HLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTF 552
L P TS YV+LSNLYA G WGDV RK++ + GLKKE YSMIE Q F
Sbjct: 589 GLDPQNTSYYVILSNLYAEQGRWGDVERLRKLVDEKGLKKEMGYSMIEAQLDF 641
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 149/316 (47%), Gaps = 8/316 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
SI S+L C+ AL G +H +K P V N ++++YAKC + VFD++
Sbjct: 191 SIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQI 250
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
E++L+SW+ +I G + A + FS+M +E I I A G
Sbjct: 251 LEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGI 310
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
H + LK G + +G +L+ MY K G A++V+ + + + +S++A+I+ ++
Sbjct: 311 AFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSR 370
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
P E FK M P+ +F L+ CS+ G + K SN F+ +
Sbjct: 371 HPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNAFLSS 430
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIA--ACSHCADYEKGLSVFKEMSNDHG 298
++ LY KF I + F I KDL+ W++ I + C D + L F M G
Sbjct: 431 ALIDLYCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNGCGD--EALETFSNMLA-CG 487
Query: 299 VRPDDFTFASILAACA 314
V+P++ F S+L+AC+
Sbjct: 488 VKPNEVVFISVLSACS 503
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 155/330 (46%), Gaps = 12/330 (3%)
Query: 136 FVGNSLISMYMK-----VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFK 190
F+ NS S+Y + Y + + +GE + N++S+ + I+ V+ Q E +FK
Sbjct: 21 FIRNSAYSLYYRSMFNTYAYYEEPVEFHGE--KDNVISWTSKISSLVKQNQSELAVGLFK 78
Query: 191 LMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV-KCKLESNPFVGNTIMALYSKF 249
+ML P+ + + S L M + C +V K ES V ++ YS +
Sbjct: 79 MMLMTEQRPNHVTVLSVIRAIS-GLGLEDMMRVICGSVIKLGFESEVSVATALIGFYSDY 137
Query: 250 NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
++ G K F KDL+ W+ ++AC Y + +F+ M D GV P+ + SI
Sbjct: 138 DM-GIVWKIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYD-GVEPNHVSIVSI 195
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
L ACA + ++ GK+IH I+ + V N+LV+MYAKC S +F+++L +++
Sbjct: 196 LPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDL 255
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNS 429
+SW TII + A K F +M+ + D L+ A A K G A+
Sbjct: 256 ISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGF 315
Query: 430 MEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+ K G+ + T L+ + + G+L A
Sbjct: 316 LLKN-GLLAFVSIGTALLQMYAKFGELESA 344
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 94/189 (49%), Gaps = 5/189 (2%)
Query: 233 ESNPFVGNTIMALY--SKFNLIGEAEKAFRLIEEKD-LISWNTFIAACSHCADYEKGLSV 289
+ N F+ N+ +LY S FN E+ EKD +ISW + I++ E + +
Sbjct: 17 QRNVFIRNSAYSLYYRSMFNTYAYYEEPVEFHGEKDNVISWTSKISSLVKQNQSELAVGL 76
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
FK M RP+ T S++ A +GL + I +I++ +V V AL+ Y+
Sbjct: 77 FKMMLMTEQ-RPNHVTVLSVIRAISGLGLEDMMRVICGSVIKLGFESEVSVATALIGFYS 135
Query: 350 KCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
+ +K+FN+ +++V W+ +++A G A ++F M+ G++P+ V+ +
Sbjct: 136 DYDM-GIVWKIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVS 194
Query: 410 LLTACNHAG 418
+L AC + G
Sbjct: 195 ILPACANVG 203
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 158/470 (33%), Positives = 273/470 (58%), Gaps = 2/470 (0%)
Query: 99 NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY 158
+ + + + C + L++G+ +HA+ L+ + +GN+L++MY K G +A V+
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 159 GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLR 218
+ + + V++ LI+G+ ++ +P F MLR G P+ F+ + ++ +
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
G LH VKC +SN VG+ ++ LY+++ L+ +A+ F +E ++ +SWN IA +
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 279 HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
+ EK L +F+ M D G RP F++AS+ AC+ ++ GK +HA++I+
Sbjct: 239 RRSGTEKALELFQGMLRD-GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA 297
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
GN L++MYAK G I + K+F+ + R+VVSWN+++ A+A H G A+ FE+M+
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 399 GIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLE 458
GI+P+ ++F+ +LTAC+H+GL+ EG Y+ M+K GI P+ H+ ++DLLGRAG L
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNR 416
Query: 459 AEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYAS 518
A + ++ P+ + LL+ACR+ ++ +G A+ +F L P P+V+L N+YAS
Sbjct: 417 ALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYAS 476
Query: 519 DGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
G W D A RK +K+SG+KKEP+ S +E++ F + H + EI
Sbjct: 477 GGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEI 526
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 209/390 (53%), Gaps = 8/390 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
++LL C+ K L QG +HA +L+ + D+++ N +LN+YAKCG + ARKVF++M +
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQI 122
R+ V+W+ +ISG+ Q AL FF+QM PNE+ +S I A A + G Q+
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H + +K G+ S VG++L+ +Y + G DA LV+ N VS+NALIAG
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
EK E+F+ MLR G P FS+A CS + L +G +H +K + F GNT+
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 303
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y+K I +A K F + ++D++SWN+ + A + ++ + F+EM G+RP+
Sbjct: 304 LDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV-GIRPN 362
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+ +F S+L AC+ + G + + + + + +V++ + G ++ + +
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIE 422
Query: 363 EM-LHRNVVSWNTIIAA---HANHRLGGSA 388
EM + W ++ A H N LG A
Sbjct: 423 EMPIEPTAAIWKALLNACRMHKNTELGAYA 452
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 97/186 (52%), Gaps = 4/186 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S +SL CS T L+QG +HA ++K G + N +L++YAK G + ARK+FD +
Sbjct: 264 SYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL 323
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
++R++VSW+++++ + Q G A+ +F +M + PNE F S ++AC+ L +G
Sbjct: 324 AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGW 383
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGE-AFEPNLVSFNALIAGFVEN 179
+ K G ++ +++ + + G + AL E EP + AL+ +
Sbjct: 384 HYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 443
Query: 180 QQPEKG 185
+ E G
Sbjct: 444 KNTELG 449
>gi|449442767|ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 182/548 (33%), Positives = 299/548 (54%), Gaps = 4/548 (0%)
Query: 32 GIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFF 91
G + D+ +SN ++N+Y KCG++ AR++F + R++VSW++++S + + G L+
Sbjct: 177 GFESDLALSNSMVNMYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLL 236
Query: 92 SQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKV 148
M + P++ F SA+SA A L G+ +H LK G V ++L+ +Y++
Sbjct: 237 QAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRC 296
Query: 149 GYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGL 208
A V+ E ++V + A+I+G V+N +K VF M+ + P + A GL
Sbjct: 297 RCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGL 356
Query: 209 EICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLI 268
C+ G +H ++ + + N+++ +Y+K N + ++ F + EKDL+
Sbjct: 357 AACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLV 416
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
SWN +A + KG+ F EM +RPD T S+L AC ++ GK IH
Sbjct: 417 SWNAIVAGHAKNGYLSKGIFFFNEMRKSF-LRPDSITVTSLLQACGSAGALCQGKWIHNF 475
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
++R L + ALV+MY KCG + + K F+ ML R++V+W+T+I + + G A
Sbjct: 476 VLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIA 535
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID 448
L+ + + TG++P+ V FI +L+AC+H GL+ +G + + SM K + +SP++EH C++D
Sbjct: 536 LRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVD 595
Query: 449 LLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSP 508
LL RAGK+ EA + K +VLG LL ACR+ V +G+ +A+ +F L+P
Sbjct: 596 LLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPGN 655
Query: 509 YVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
+V L+N YAS W V A ++ GLKK P +S IEV GT F + SH KI +I
Sbjct: 656 FVQLANSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSIEVHGTTFTFFASHNSHPKIEKI 715
Query: 569 NYMLKTLS 576
+K LS
Sbjct: 716 ILTVKALS 723
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 143/462 (30%), Positives = 244/462 (52%), Gaps = 6/462 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + SL C+ G+SLH +V+ G+ D + + +++ YAK G + L RKVFD
Sbjct: 49 AYTFPSLFKACTNLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFD 108
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQ 121
M +RN+V W+ +I + + G+ +A F QM + + +S GI L
Sbjct: 109 TMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKLPLLLC 168
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H + G+ S + NS+++MY K G +DA ++ ++VS+N+L++ + +
Sbjct: 169 LHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGA 228
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
E+ ++ + M + + PD+ +F L ++ DLR G ++H L +K L + V +
Sbjct: 229 TEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESA 288
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC--SHCADYEKGLSVFKEMSNDHGV 299
++ LY + + A K F+ EKD++ W I+ + CAD K L VF +M + V
Sbjct: 289 LVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCAD--KALGVFYQMI-ESNV 345
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+P T AS LAACA L G IH +++R + D+ N+LV MYAKC + S
Sbjct: 346 KPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCS 405
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+FN+M+ +++VSWN I+A HA + + F +M+ + ++PDS+T LL AC AG
Sbjct: 406 IFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGA 465
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ +G+ N + ++ I P I T L+D+ + G L A++
Sbjct: 466 LCQGKWIHNFVLRSSLI-PCIMTETALVDMYFKCGNLENAQK 506
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 188/396 (47%), Gaps = 8/396 (2%)
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
S +LVS + HHQ + ++++ + H + Y F S AC + G +H
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQ---KTHTQLDAYTFPSLFKACTNLNLFSHGLSLH 72
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ G + S++G+SLIS Y K G V+ + N+V + +I + +
Sbjct: 73 QSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDID 132
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
F +FK M G+ P + L + + L + LHCL + ES+ + N+++
Sbjct: 133 IAFSMFKQMRESGIQPTSVTL---LSLLPGISKLPLLLCLHCLIILHGFESDLALSNSMV 189
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y K I +A + F+ I+ +D++SWN+ ++A S E+ L + + M + ++PD
Sbjct: 190 NMYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIED-IKPDK 248
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
TF S L+A A ++ GK +H +++ LN D V +ALV +Y +C + +YK+F
Sbjct: 249 QTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKS 308
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
++VV W +I+ + AL +F QM + +KP + T L AC G G
Sbjct: 309 TTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIG 368
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+ + + GI DI L+ + + KL ++
Sbjct: 369 ASIHGYVLRQ-GIMLDIPAQNSLVTMYAKCNKLQQS 403
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 109/214 (50%), Gaps = 8/214 (3%)
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
S+N+ ++ S+ + + L + M H + D +TF S+ AC L HG +H
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQKTH-TQLDAYTFPSLFKACTNLNLFSHGLSLHQS 74
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
++ L+ D +G++L++ YAK G I K+F+ ML RNVV W TII +++ A
Sbjct: 75 VVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIA 134
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK-EGEAYFNSMEKTYGISPDIEHFTCLI 447
+F+QM+ +GI+P SVT + LL G+ K + + +G D+ ++
Sbjct: 135 FSMFKQMRESGIQPTSVTLLSLL-----PGISKLPLLLCLHCLIILHGFESDLALSNSMV 189
Query: 448 DLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
++ G+ G++ +A + +D + +LLSA
Sbjct: 190 NMYGKCGRIADARRLFQSIDC-RDIVSWNSLLSA 222
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 165/487 (33%), Positives = 286/487 (58%), Gaps = 14/487 (2%)
Query: 98 PNEYIFASAIS---ACAGIQSLVKGQQIHAYSLKFGYASIS-----FVGNSLISMYMKVG 149
P YI I+ +CA S K +QIHA+S++ G + ++ +L+S +
Sbjct: 34 PKSYILKKCIALLLSCAS--SKFKFRQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMS 91
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
Y+ ++ + PN+ ++N +I G+ E++ P E+++ M + PD ++ L+
Sbjct: 92 YAHQ---IFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLK 148
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
+ D+R+G +H + ++ ES FV NT++ +Y+ A K F L+ E++L++
Sbjct: 149 AIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVT 208
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
WN+ I + + L++F+EM GV PD FT S+L+ACA L ++ G++ H ++
Sbjct: 209 WNSVINGYALNGRPNEALTLFREMGL-RGVEPDGFTMVSLLSACAELGALALGRRAHVYM 267
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
+++ L+ ++ GNAL+++YAKCG I ++K+F+EM ++VVSW ++I A + G AL
Sbjct: 268 VKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEAL 327
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
+LF++++ G+ P +TF+G+L AC+H G+V EG YF M++ YGI P IEH+ C++DL
Sbjct: 328 ELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDL 387
Query: 450 LGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPY 509
LGRAG + +A E+ + P+ + +V TLL AC + + +GE QL L+P + Y
Sbjct: 388 LGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDY 447
Query: 510 VLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEIN 569
VLLSNLYAS+ W DV R+ + G+KK P +S++E++ +F + + SH + EI
Sbjct: 448 VLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIY 507
Query: 570 YMLKTLS 576
L ++
Sbjct: 508 VKLAEIT 514
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 197/395 (49%), Gaps = 23/395 (5%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGI---QPDVIVSNHVLNLYAKCGKMILAR 57
+ K I+ LL S +Q +HA ++ G+ PD + + L + C M A
Sbjct: 39 LKKCIALLLSCASSKFKFRQ---IHAFSIRHGVPLTNPD-MGKYLIFTLLSFCSPMSYAH 94
Query: 58 KVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQ 114
++F ++ N+ +W+ MI G+ ++ + ALE + QMH + P+ + + + A A +
Sbjct: 95 QIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLM 154
Query: 115 SLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIA 174
+ +G+++H+ +++ G+ S+ FV N+L+ MY G++ A ++ E NLV++N++I
Sbjct: 155 DVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVIN 214
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
G+ N +P + +F+ M +G+ PD F+ L C+ L G H VK L+
Sbjct: 215 GYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDG 274
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
N GN ++ LY+K I +A K F +EEK ++SW + I + ++ L +FKE+
Sbjct: 275 NLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELE 334
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV------GNALVNMY 348
G+ P + TF +L AC+ V G R+ ++ G+ +V++
Sbjct: 335 RK-GLMPSEITFVGVLYACSHCGMVDEGFDYFK-----RMKEEYGIVPKIEHYGCMVDLL 388
Query: 349 AKCGLISCSYKLFNEM-LHRNVVSWNTIIAAHANH 382
+ GL+ +++ M + N V W T++ A H
Sbjct: 389 GRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIH 423
>gi|414869047|tpg|DAA47604.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 694
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 179/563 (31%), Positives = 314/563 (55%), Gaps = 9/563 (1%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G L + ++ G+ +V ++ +L++YAKCG++ AR+VFD M RN+VSW+A+I+G+
Sbjct: 110 GAQLQSFSVRCGLADNVFPASALLDVYAKCGRLGDARRVFDGMPVRNIVSWNAIIAGYTD 169
Query: 81 AGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
+ + A+E F +M + P+ FA ++ AG + +Q+H +K+G A
Sbjct: 170 SRKPAEAMELFLEMQRVGSVPDGTTFAVLLATIAGPRWYSLMRQLHGKIVKYGSALGLVA 229
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ-G 196
N+ I+ Y + +D+ ++ +L+S+N+++ + + ++ F M+R+ G
Sbjct: 230 LNAAITAYSQCDALADSRKIFDGIESRDLISWNSMLGAYAYHGLDDEAMRFFVRMMRESG 289
Query: 197 LLPDRFSFAGGLEICSVSN-DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN---LI 252
+ PD +SF + +CS D ++G +H L +K LE V N ++A+Y++F ++
Sbjct: 290 IQPDMYSFTSAISVCSEHGCDDQQGRSIHSLVIKFGLEGVTPVCNAMIAMYTRFADNCMM 349
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
+A F + KD +SWN+ + SH L F+ M ++ +R D+F ++ L +
Sbjct: 350 EDAYNCFSSLVFKDAVSWNSMLTGYSHHGLSSDALKFFRCMRAEN-IRTDEFGLSAALRS 408
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
C+ LA ++ G+Q+H+ +++ + V ++L+ MY+KCG++ + K F E + V W
Sbjct: 409 CSDLAVLRLGRQVHSLVVQSGFASNDFVSSSLIFMYSKCGVLGDARKSFEEADKSSSVPW 468
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
N+++ +A H + LF +M + D VTF+ L+TA +H GLV EG N+ME
Sbjct: 469 NSMMFGYAQHGQAQTVTDLFNEMLDLEVPLDHVTFVALITAYSHGGLVDEGSEILNTMET 528
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGE 492
Y I +EH+ C +DL GRAG+L +A+E + P D IV TLL ACR+ ++ +
Sbjct: 529 RYKIPMRMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAIVWMTLLGACRIHGNMELAS 588
Query: 493 RLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTF 552
+A+ LF +P S YVLLS++Y+ GMW D A +K++++ L K P +S IEV+
Sbjct: 589 DVARHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQKVMRNRALSKIPGWSWIEVKNEV 648
Query: 553 EKFTVAEFSHSKIGEINYMLKTL 575
F + SH ++ EI ML+ L
Sbjct: 649 HSFNADDRSHPRMVEIFDMLRML 671
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 206/407 (50%), Gaps = 9/407 (2%)
Query: 25 HAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEH 84
HA +LK G N +L Y+ G + AR+VFDE+ + SW+++++ H AG H
Sbjct: 15 HATLLKSGASSPTPW-NQLLTAYSATG-LAAARRVFDEIPHPDAASWNSLLAAHVAAGAH 72
Query: 85 LLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSL 141
A MH L + + SA+ + A + G Q+ ++S++ G A F ++L
Sbjct: 73 RDAWRLLRAMHARGLAASTFALGSALRSAAAARRPELGAQLQSFSVRCGLADNVFPASAL 132
Query: 142 ISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDR 201
+ +Y K G DA V+ N+VS+NA+IAG+ ++++P + E+F M R G +PD
Sbjct: 133 LDVYAKCGRLGDARRVFDGMPVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRVGSVPDG 192
Query: 202 FSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRL 261
+FA L + LH VK N + YS+ + + ++ K F
Sbjct: 193 TTFAVLLATIAGPRWYSLMRQLHGKIVKYGSALGLVALNAAITAYSQCDALADSRKIFDG 252
Query: 262 IEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA-SVQ 320
IE +DLISWN+ + A ++ ++ + F M + G++PD ++F S ++ C+ Q
Sbjct: 253 IESRDLISWNSMLGAYAYHGLDDEAMRFFVRMMRESGIQPDMYSFTSAISVCSEHGCDDQ 312
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG---LISCSYKLFNEMLHRNVVSWNTIIA 377
G+ IH+ +I+ L V NA++ MY + ++ +Y F+ ++ ++ VSWN+++
Sbjct: 313 QGRSIHSLVIKFGLEGVTPVCNAMIAMYTRFADNCMMEDAYNCFSSLVFKDAVSWNSMLT 372
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+++H L ALK F M+A I+ D L +C+ +++ G
Sbjct: 373 GYSHHGLSSDALKFFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGR 419
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 9/202 (4%)
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
S+P N ++ YS L A + F I D SWN+ +AA + + + M
Sbjct: 24 SSPTPWNQLLTAYSATGL-AAARRVFDEIPHPDAASWNSLLAAHVAAGAHRDAWRLLRAM 82
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
+ G+ F S L + A + G Q+ + +R L +V +AL+++YAKCG
Sbjct: 83 -HARGLAASTFALGSALRSAAAARRPELGAQLQSFSVRCGLADNVFPASALLDVYAKCGR 141
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ + ++F+ M RN+VSWN IIA + + R A++LF +M+ G PD TF LL
Sbjct: 142 LGDARRVFDGMPVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRVGSVPDGTTFAVLLAT 201
Query: 414 CNHAGLVKEGEAYFNSMEKTYG 435
G +++ M + +G
Sbjct: 202 I-------AGPRWYSLMRQLHG 216
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 192/574 (33%), Positives = 323/574 (56%), Gaps = 15/574 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMIL-ARKVFDEM 63
++++ CS + + G + ++K G + DV V +++++ K A KVFD+M
Sbjct: 170 TAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKM 229
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
SE N+V+W+ MI+ Q G A+ FF M L +++ +S SACA +++L G+
Sbjct: 230 SELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGR 289
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKV---GYSSDALLVYGEAFEPNLVSFNALIAGFV 177
Q+H+++++ G A V SL+ MY K G D V+ + +++S+ ALI G++
Sbjct: 290 QLHSWAIRSGLADD--VECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYM 347
Query: 178 EN-QQPEKGFEVFKLMLRQG-LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+N + +F M+ QG + P+ F+F+ + C +D R G + K L SN
Sbjct: 348 QNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASN 407
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
V N++++++ K + + +A AF + EK+L+S+NTF+ D+E + E++
Sbjct: 408 SSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAE 467
Query: 296 DH-GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
GV FTFAS+L+ A + S++ G+QIH+ ++++ L+ + V NAL++MY+KCG I
Sbjct: 468 RELGVSA--FTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSI 525
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ ++F+ M +RNV+SW ++I A H L+ F QM G+KP+ VT++ +L+AC
Sbjct: 526 DTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSAC 585
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
+H GLV EG +FNSM + + I P +EH+ C++DLL RAG L +A E+ P D +V
Sbjct: 586 SHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLV 645
Query: 475 LGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKD 534
T L ACR+ + +G+ A+++ P + Y+ LSN+YAS G W + R+ +K+
Sbjct: 646 WRTFLGACRVHSNTELGKLAARKILEFDPNEPAAYIQLSNIYASAGKWEESTEMRRKMKE 705
Query: 535 SGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
L KE S IEV KF V + SH +I
Sbjct: 706 RNLVKEGGCSWIEVGDKVHKFYVGDTSHPNAHQI 739
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 234/468 (50%), Gaps = 15/468 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SSLL C + + + G +HA +++ I+PD ++ N +++LY+K G + A+ VF+ M
Sbjct: 64 TFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKAKDVFETM 123
Query: 64 ---SERNLVSWSAMISGHHQAGEHLLALEFFS---QMHLLPNEYIFASAISACAGIQSLV 117
+R++VSWSAM++ G A++ F +M L+PN+Y + + I AC+ +
Sbjct: 124 GRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVG 183
Query: 118 KGQQIHAYSLKFG-YASISFVGNSLISMYMKVGYS-SDALLVYGEAFEPNLVSFNALIAG 175
G+ I + +K G + S VG SLI M++K S +A V+ + E N+V++ +I
Sbjct: 184 VGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITR 243
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
++ P + F M+ G D+F+ + C+ +L G LH ++ L +
Sbjct: 244 CMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRSGLADD 303
Query: 236 PFVGNTIMALYSKFNLIG---EAEKAFRLIEEKDLISWNTFIAA-CSHCADYEKGLSVFK 291
V +++ +Y+K + G + K F +++ ++SW I +C + +++F
Sbjct: 304 --VECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFS 361
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
EM V P+ FTF+S AC ++ + GKQ+ H + L + V N++++M+ KC
Sbjct: 362 EMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKC 421
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
+ + F + +N+VS+NT + + A +L ++ + + TF LL
Sbjct: 422 DRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLL 481
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+ + G +++GE + + K G+S + LI + + G + A
Sbjct: 482 SGVANVGSLRKGEQIHSQVLK-LGLSCNQPVCNALISMYSKCGSIDTA 528
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 143/295 (48%), Gaps = 19/295 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS C + G + K G+ + VSN V++++ KC +M AR F+ +
Sbjct: 375 TFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESL 434
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
SE+NLVS++ + G + + A E S++ L + + FAS +S A + SL KG+
Sbjct: 435 SEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGE 494
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIH+ LK G + V N+LISMY K G A V+ N++S+ ++I GF ++
Sbjct: 495 QIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHG 554
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS----VSNDLRK-GMILHCLTVKCKLESN 235
E+ E F M ++G+ P+ ++ L CS VS R + +K K+E
Sbjct: 555 FAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHY 614
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIE----EKDLISWNTFIAACSHCADYEKG 286
++ L + L+ + AF I + D++ W TF+ AC ++ E G
Sbjct: 615 A----CMVDLLCRAGLLTD---AFEFINTMPFQADVLVWRTFLGACRVHSNTELG 662
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 140/291 (48%), Gaps = 10/291 (3%)
Query: 191 LMLRQGLLP-DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF 249
LM R G+ P D +F+ L+ C + R G ++H ++ ++E + + N++++LYSK
Sbjct: 51 LMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKS 110
Query: 250 NLIGEAEKAFRLI---EEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
+ +A+ F + ++D++SW+ +A + + +F E + G+ P+D+ +
Sbjct: 111 GDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFL-EMGLVPNDYCY 169
Query: 307 ASILAACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKC-GLISCSYKLFNEM 364
+++ AC+ V G+ I L++ DV VG +L++M+ K +YK+F++M
Sbjct: 170 TAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKM 229
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
NVV+W +I A++ F M +G + D T + +AC + G
Sbjct: 230 SELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGR 289
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
+S G++ D+E L+D+ + ++ K F QD V+
Sbjct: 290 Q-LHSWAIRSGLADDVE--CSLVDMYAKCSADGSVDDCRKVFDRMQDHSVM 337
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 90/184 (48%), Gaps = 5/184 (2%)
Query: 279 HCADYEKGLSVFKEMSNDHGVRP-DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD 337
+ D +S M+ D G+RP D TF+S+L +C + GK +HA LI + D
Sbjct: 38 NAGDLRGAVSALDLMARD-GIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPD 96
Query: 338 VGVGNALVNMYAKCGLISCSYKLFNEMLH---RNVVSWNTIIAAHANHRLGGSALKLFEQ 394
+ N+L+++Y+K G ++ + +F M R+VVSW+ ++A N+ A+KLF +
Sbjct: 97 SVLYNSLISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVE 156
Query: 395 MKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
G+ P+ + ++ AC+++ V G + KT D+ LID+ +
Sbjct: 157 FLEMGLVPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGE 216
Query: 455 KLLE 458
E
Sbjct: 217 NSFE 220
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +SLL + +L++G +H+ VLK+G+ + V N ++++Y+KCG + A +VF
Sbjct: 474 AFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFS 533
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
M RN++SW++MI+G + G LE F+QM + PNE + + +SAC+ + + +
Sbjct: 534 LMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSE 593
Query: 119 GQQ 121
G +
Sbjct: 594 GWR 596
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 197/603 (32%), Positives = 303/603 (50%), Gaps = 71/603 (11%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C+ + +G LHA + G DV V N ++NLYA CG + AR+VF+E +
Sbjct: 111 LLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLD 170
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSL 127
LVSW+ +++G+ QAGE A F M P AS
Sbjct: 171 LVSWNTLLAGYVQAGEVEEAERVFEGM---PERNTIAS---------------------- 205
Query: 128 KFGYASISFVGNSLISMYMKVGYSSDALLVYG--EAFEPNLVSFNALIAGFVENQQPEKG 185
NS+I+++ + G A ++ E ++VS++A+++ + +N+ E+
Sbjct: 206 -----------NSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEA 254
Query: 186 FEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMAL 245
+F M G+ D L CS ++ G +H L VK +E + N ++ L
Sbjct: 255 LVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHL 314
Query: 246 YS--------------------------------KFNLIGEAEKAFRLIEEKDLISWNTF 273
YS + I +AE F + EKD++SW+
Sbjct: 315 YSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAM 374
Query: 274 IAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR 333
I+ + + + L++F+EM HGVRPD+ S ++AC LA++ GK IHA++ R +
Sbjct: 375 ISGYAQHECFSEALALFQEMQL-HGVRPDETALVSAISACTHLATLDLGKWIHAYISRNK 433
Query: 334 LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFE 393
L +V + L++MY KCG + + ++F M + V +WN +I A + +L +F
Sbjct: 434 LQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFA 493
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 453
MK TG P+ +TF+G+L AC H GLV +G YFNSM + I +I+H+ C++DLLGRA
Sbjct: 494 DMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRA 553
Query: 454 GKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLS 513
G L EAEE P+ D G LL ACR RD +GERL ++L LQP +VLLS
Sbjct: 554 GLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLS 613
Query: 514 NLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLK 573
N+YAS G WG+V R ++ G+ K P SMIE GT +F + +H +I +I +ML
Sbjct: 614 NIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDIEHMLD 673
Query: 574 TLS 576
++
Sbjct: 674 VVA 676
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/502 (22%), Positives = 227/502 (45%), Gaps = 91/502 (18%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMI---LARKVF 60
++ SLL C + +Q +S + G+ D ++ ++N + ++ + ++F
Sbjct: 5 TLDSLLQSCKCPRHFKQLLS---QTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIF 61
Query: 61 DEMSERNLVSWSAMISGH-------HQAGEHLLALEFFSQMHLLPNEYIFASAISACAGI 113
+ + N +W+ ++ H HQA LL + F H P+ Y + + CA
Sbjct: 62 NHLRNPNTFTWNTIMRAHLYLQNSPHQA---LLHYKLFLASHAKPDSYTYPILLQCCAAR 118
Query: 114 QSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALI 173
S +G+Q+HA+++ G+ +V N+L+++Y G A V+ E+ +LVS+N L+
Sbjct: 119 VSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLL 178
Query: 174 AGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE 233
AG+V+ + E+ VF+ M P+R
Sbjct: 179 AGYVQAGEVEEAERVFEGM------PER-------------------------------- 200
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLI--EEKDLISWNTFIAACSHCADYEKGLSVFK 291
N N+++AL+ + + +A + F + E+D++SW+ ++ E+ L +F
Sbjct: 201 -NTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFV 259
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
EM GV D+ S L+AC+ + +V+ G+ +H +++ + V + NAL+++Y+ C
Sbjct: 260 EMKGS-GVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSC 318
Query: 352 GLISCSYKLFNE--------------------------------MLHRNVVSWNTIIAAH 379
G I + ++F++ M ++VVSW+ +I+ +
Sbjct: 319 GEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGY 378
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
A H AL LF++M+ G++PD + ++AC H + G+ + ++ + +
Sbjct: 379 AQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGK-WIHAYISRNKLQVN 437
Query: 440 IEHFTCLIDLLGRAGKLLEAEE 461
+ T LID+ + G + A E
Sbjct: 438 VILSTTLIDMYMKCGCVENALE 459
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 145/323 (44%), Gaps = 29/323 (8%)
Query: 227 TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRL---IEEKDLISWNTFIAACSHCADY 283
T+ L ++P+ + ++ S + + R+ + + +WNT + A + +
Sbjct: 26 TILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIFNHLRNPNTFTWNTIMRAHLYLQNS 85
Query: 284 -EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
+ L +K H +PD +T+ +L CA S G+Q+HAH + + DV V N
Sbjct: 86 PHQALLHYKLFLASHA-KPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRN 144
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
L+N+YA CG + + ++F E ++VSWNT++A + A ++FE M +
Sbjct: 145 TLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGMP----ER 200
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLI-----DLLGRAGKLL 457
+++ ++ G V++ FN + G D+ ++ ++ + +G +L
Sbjct: 201 NTIASNSMIALFGRKGCVEKARRIFNGVR---GRERDMVSWSAMVSCYEQNEMGEEALVL 257
Query: 458 EAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSN--- 514
E K + D +V+ + LSAC +V +G R L YV L N
Sbjct: 258 FVE--MKGSGVAVDEVVVVSALSACSRVLNVEMG-RWVHGL--AVKVGVEDYVSLKNALI 312
Query: 515 -LYASDGMWGDVAGARKMLKDSG 536
LY+S G++ AR++ D G
Sbjct: 313 HLYSS---CGEIVDARRIFDDGG 332
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 102/210 (48%), Gaps = 15/210 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S + C+ L G +HA + + +Q +VI+S ++++Y KCG + A +VF M
Sbjct: 405 ALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAM 464
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
E+ + +W+A+I G G +L F+ M +PNE F + AC + + G+
Sbjct: 465 EEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGR 524
Query: 121 Q-----IHAYSLKFGYASISFVGNSLISMYMKVGYSSDA-LLVYGEAFEPNLVSFNALIA 174
IH + ++ A+I G ++ + + G +A L+ P++ ++ AL+
Sbjct: 525 HYFNSMIHEHKIE---ANIKHYG-CMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLG 580
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSF 204
+++ E G + + +++ L PD F
Sbjct: 581 ACRKHRDNEMGERLGRKLIQ--LQPDHDGF 608
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 19/199 (9%)
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA-KCGLISCSY--KLF 361
T S+L +C +H KQ+ + I L D + L+N + L+ Y ++F
Sbjct: 5 TLDSLLQSCK---CPRHFKQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIF 61
Query: 362 NEMLHRNVVSWNTIIAAH-----ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
N + + N +WNTI+ AH + H+ AL ++ A+ KPDS T+ LL C
Sbjct: 62 NHLRNPNTFTWNTIMRAHLYLQNSPHQ----ALLHYKLFLASHAKPDSYTYPILLQCC-- 115
Query: 417 AGLVKEGEAY-FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
A V E E ++ + G D+ L++L G + A ++ P+ D +
Sbjct: 116 AARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPV-LDLVSW 174
Query: 476 GTLLSACRLRRDVVIGERL 494
TLL+ +V ER+
Sbjct: 175 NTLLAGYVQAGEVEEAERV 193
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 185/629 (29%), Positives = 309/629 (49%), Gaps = 77/629 (12%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
K+ S+L C+ K+ G +H+ + + D + +++ YA CG + R+VFD
Sbjct: 99 TKTYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFD 158
Query: 62 EMS---------------------------------------------------ERNLVS 70
M +R+++S
Sbjct: 159 TMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVIS 218
Query: 71 WSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAIS---ACAGIQSLVKGQQIHAYSL 127
W++MISG+ G L + QM L + A+ IS CA +L G+ +H+ ++
Sbjct: 219 WNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAI 278
Query: 128 KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE 187
K + N+L+ MY K G AL V+ + E N+VS+ ++IAG+ + + + +
Sbjct: 279 KSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIK 338
Query: 188 VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYS 247
+ + M ++G+ D + L C+ S L G +H +ESN FV N +M +Y+
Sbjct: 339 LLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYA 398
Query: 248 KFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFA 307
K + A F + KD+ISWNT I ++PD T A
Sbjct: 399 KCGSMEAANSVFSTMVVKDIISWNTMIGE----------------------LKPDSRTMA 436
Query: 308 SILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR 367
+L ACA L++++ GK+IH +++R + D V NALV++Y KCG++ + LF+ + +
Sbjct: 437 CVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSK 496
Query: 368 NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYF 427
++VSW +IA + H G A+ F +M+ GI+PD V+FI +L AC+H+GL+++G +F
Sbjct: 497 DLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF 556
Query: 428 NSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRD 487
M+ + I P +EH+ C++DLL R G L +A E+ + P+ D + G LL CR D
Sbjct: 557 YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHD 616
Query: 488 VVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIE 547
+ + E++A+++F L+P T YVLL+N+YA W +V R+ + GL+K P S IE
Sbjct: 617 IELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIE 676
Query: 548 VQGTFEKFTVA-EFSHSKIGEINYMLKTL 575
++G F SH I +LK +
Sbjct: 677 IKGKVNLFVSGNNSSHPHSKNIESLLKKM 705
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 142/341 (41%), Gaps = 53/341 (15%)
Query: 166 LVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHC 225
+ +NA I F + E E+ + + L + ++ L++C+ G +H
Sbjct: 66 VTDYNAKILHFCQLGDLENAMELICMCQKSEL--ETKTYGSVLQLCAGLKSFTDGKKVHS 123
Query: 226 LTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEK 285
+ + + +G +++ Y+ + E + F +E+K++ WN ++ + D+++
Sbjct: 124 IIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKE 183
Query: 286 GLSVFKEMSND--HGVRP------------------------------------------ 301
+ +FK M G RP
Sbjct: 184 SICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMM 243
Query: 302 ------DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
D T S+L CA ++ GK +H+ I+ + + N L++MY+KCG +
Sbjct: 244 YLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLD 303
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ ++F +M RNVVSW ++IA + A+KL +QM+ G+K D V +L AC
Sbjct: 304 GALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACA 363
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+G + G+ + + K + ++ L+D+ + G +
Sbjct: 364 RSGSLDNGKDVHDYI-KANNMESNLFVCNALMDMYAKCGSM 403
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 183/606 (30%), Positives = 328/606 (54%), Gaps = 37/606 (6%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+ +LL + K+ Q LHA VLK + + +L++Y+ + + ++F+ +
Sbjct: 9 VKALLRNPLSIKSRSQAQQLHAQVLKFQAS-SLCNLSLLLSIYSHINLLHDSLRLFNTIH 67
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
++W ++I + G +L F M L P+ +F S + +CA + L G+
Sbjct: 68 FPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGES 127
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGY---SSDALLVYGEAF---------------- 162
+H Y ++ G + GN+L++MY K+ + S L GE F
Sbjct: 128 LHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVL 187
Query: 163 -------------EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
E +LVS+N +IAG N E+ + + M L PD F+ + L
Sbjct: 188 SEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLP 247
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
+ + + D+ +G +H +++ L+++ +V ++++ +Y+K + ++ + F L+ E+D IS
Sbjct: 248 LIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGIS 307
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
WN+ IA C +++GL F++M ++P ++F+SI+ ACA L ++ GKQ+H ++
Sbjct: 308 WNSIIAGCVQNGLFDEGLRFFRQMLMAK-IKPKSYSFSSIMPACAHLTTLHLGKQLHGYI 366
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
R ++++ + ++LV+MYAKCG I + ++F+ M R++VSW +I A H A+
Sbjct: 367 TRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAI 426
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
+LFEQM+ GIKP+ V F+ +LTAC+H GLV E YFNSM + +GI+P +EH+ + DL
Sbjct: 427 ELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDL 486
Query: 450 LGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPY 509
LGRAG+L EA ++ +G + TLLSACR+ ++ + E++A ++ + P T Y
Sbjct: 487 LGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAY 546
Query: 510 VLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEIN 569
+LL+N+Y++ W + A R ++ G++K P+ S IEV+ F + SH +I
Sbjct: 547 ILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIR 606
Query: 570 YMLKTL 575
++ L
Sbjct: 607 EAMEVL 612
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 118/212 (55%), Gaps = 3/212 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+L ++ + +G +H ++ G+ D+ V++ ++++YAKC ++ + +VF +
Sbjct: 241 TLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLL 300
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ER+ +SW+++I+G Q G L FF QM + P Y F+S + ACA + +L G+
Sbjct: 301 TERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGK 360
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H Y + G+ F+ +SL+ MY K G A ++ ++VS+ A+I G +
Sbjct: 361 QLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHG 420
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
Q E+F+ M +G+ P+ +F L CS
Sbjct: 421 QAPDAIELFEQMETEGIKPNHVAFMAVLTACS 452
>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 752
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 185/574 (32%), Positives = 305/574 (53%), Gaps = 6/574 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L CS G +H V+K G +V V ++ +Y K G +A KVFD M ++
Sbjct: 174 ILQACSSPDDRILGEQIHCFVIKSGFDENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKD 233
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
+ + MI + +AG A+E F + P +Y F + IS C G + +G+Q+
Sbjct: 234 IRCLNFMILEYGRAGNGGKAIEVFKNLLNDGFEPTDYTFTNIISTCNGDLGVEEGKQLQG 293
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ K+G+ S + VGN++I+MY G +A ++ E NL+S+ ALI+G+ + +K
Sbjct: 294 LAFKYGFLSETSVGNAIITMYGNSGMPKEAERMFSSMSEKNLISWTALISGYSRSGYGKK 353
Query: 185 GFEVF-KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ F L G+ D L+ CS N+L G+ +H +K + V ++
Sbjct: 354 AVDAFLGLHDELGINFDSTLLTAILDCCSDCNNLELGLQIHGFVMKLGCACDVNVATALV 413
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA-CSHCADYEKGLSVFKEMSNDHGVRPD 302
LY+K + A F + K + S+N +A D E + +F ++ GV+PD
Sbjct: 414 DLYAKCEKLQSARIVFDHLSNKGIASFNAILAGFLESSGDEEDPMILFNQLRL-AGVKPD 472
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
TF+ +L+ A AS++ G+ HA+ ++ + ++ V N++++MYAKCG I ++++FN
Sbjct: 473 MVTFSRLLSLLANQASLEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIEDAHQMFN 532
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
M R+ +SWN +I+A+A H +L LFE+MK G PD T + +L AC ++GL K+
Sbjct: 533 IMNCRDSISWNALISAYALHGQAQKSLFLFEEMKRKGFDPDEFTILAILQACTYSGLWKD 592
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G FN ME YGI P +EH+ C+ DLLGRAG L EA + K+ P + ++ TL++ C
Sbjct: 593 GICLFNLMEPKYGIKPLLEHYACMADLLGRAGYLSEAMDIIKRSPFPKSTLLWRTLVNVC 652
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
+L ++ G+ +K L L P Y+L+SN+YAS+ M + A RK++ D +KE
Sbjct: 653 KLHGNLNFGKLASKHLLDLSPVEAGSYILVSNMYASEKMSDEAAKVRKVMNDLKFRKEAG 712
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
S IE+ F ++ H + EI L+ L+
Sbjct: 713 SSWIEIDNKVHHFVASDKDHPESREIYTRLELLT 746
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 144/514 (28%), Positives = 248/514 (48%), Gaps = 17/514 (3%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G ++H+ ++K G Q D N+VLNLY K ++ LA+KVFD M RN ++W+++I G+ +
Sbjct: 86 GQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRNTITWTSLIKGYLE 145
Query: 81 AGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
+ A MH NE+ + AC+ + G+QIH + +K G+ FV
Sbjct: 146 DNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDENVFV 205
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
G SLI+MY K G+ A V+ ++ N +I + K EVFK +L G
Sbjct: 206 GTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDGF 265
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
P ++F + C+ + +G L L K S VGN I+ +Y + EAE+
Sbjct: 266 EPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAER 325
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F + EK+LISW I+ S +K + F + ++ G+ D +IL C+
Sbjct: 326 MFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDCN 385
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
+++ G QIH ++++ DV V ALV++YAKC + + +F+ + ++ + S+N I+A
Sbjct: 386 NLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILA 445
Query: 378 AHANHRLG-GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
+ LF Q++ G+KPD VTF LL+ + +++G ++ KT G
Sbjct: 446 GFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKT-GF 504
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRL----RRDVVIGE 492
+I +I + + G + +A + +D I L+SA L ++ + + E
Sbjct: 505 DTNISVANSVISMYAKCGSIEDAHQMFNIMNC-RDSISWNALISAYALHGQAQKSLFLFE 563
Query: 493 RLAKQLFHLQPTTTSPYVLLSNLYAS--DGMWGD 524
+ ++ F + +L+ L A G+W D
Sbjct: 564 EMKRKGFD-----PDEFTILAILQACTYSGLWKD 592
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 164/316 (51%), Gaps = 6/316 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++++ C+ +++G L K G + V N ++ +Y G A ++F M
Sbjct: 271 TFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAERMFSSM 330
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKG 119
SE+NL+SW+A+ISG+ ++G A++ F +H + + + + + C+ +L G
Sbjct: 331 SEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDCNNLELG 390
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
QIH + +K G A V +L+ +Y K A +V+ + SFNA++AGF+E+
Sbjct: 391 LQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILAGFLES 450
Query: 180 QQPEKGFEVFKLMLR-QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
E+ + LR G+ PD +F+ L + + L KG H TVK ++N V
Sbjct: 451 SGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGFDTNISV 510
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N+++++Y+K I +A + F ++ +D ISWN I+A + +K L +F+EM G
Sbjct: 511 ANSVISMYAKCGSIEDAHQMFNIMNCRDSISWNALISAYALHGQAQKSLFLFEEMKR-KG 569
Query: 299 VRPDDFTFASILAACA 314
PD+FT +IL AC
Sbjct: 570 FDPDEFTILAILQACT 585
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 175/366 (47%), Gaps = 5/366 (1%)
Query: 96 LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL 155
LL N++ I G + + GQ +H+Y +K G +F GN+++++Y+K A
Sbjct: 65 LLFNDW--PELIKISIGSRDFLLGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQ 122
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN 215
V+ N +++ +LI G++E+ + F + M + G + + L+ CS +
Sbjct: 123 KVFDRMRTRNTITWTSLIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPD 182
Query: 216 DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIA 275
D G +HC +K + N FVG +++A+Y+K AEK F + KD+ N I
Sbjct: 183 DRILGEQIHCFVIKSGFDENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMIL 242
Query: 276 ACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN 335
+ K + VFK + ND G P D+TF +I++ C G V+ GKQ+ +
Sbjct: 243 EYGRAGNGGKAIEVFKNLLND-GFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFL 301
Query: 336 QDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM 395
+ VGNA++ MY G+ + ++F+ M +N++SW +I+ ++ G A+ F +
Sbjct: 302 SETSVGNAIITMYGNSGMPKEAERMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGL 361
Query: 396 -KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
GI DS +L C+ ++ G + K G + D+ T L+DL +
Sbjct: 362 HDELGINFDSTLLTAILDCCSDCNNLELGLQIHGFVMK-LGCACDVNVATALVDLYAKCE 420
Query: 455 KLLEAE 460
KL A
Sbjct: 421 KLQSAR 426
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 128/226 (56%), Gaps = 4/226 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
++++L CS L+ G+ +H V+K+G DV V+ +++LYAKC K+ AR VFD +S
Sbjct: 374 LTAILDCCSDCNNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLS 433
Query: 65 ERNLVSWSAMISGH-HQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
+ + S++A+++G +G+ + F+Q+ L P+ F+ +S A SL KG+
Sbjct: 434 NKGIASFNAILAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGR 493
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
HAY++K G+ + V NS+ISMY K G DA ++ + +S+NALI+ + +
Sbjct: 494 SFHAYTVKTGFDTNISVANSVISMYAKCGSIEDAHQMFNIMNCRDSISWNALISAYALHG 553
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCL 226
Q +K +F+ M R+G PD F+ L+ C+ S + G+ L L
Sbjct: 554 QAQKSLFLFEEMKRKGFDPDEFTILAILQACTYSGLWKDGICLFNL 599
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 190/548 (34%), Positives = 291/548 (53%), Gaps = 4/548 (0%)
Query: 32 GIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFF 91
G D+ V + ++ Y K ++ ARKVFD M ER+ V W+ M+SG + A+ F
Sbjct: 136 GFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIF 195
Query: 92 SQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKV 148
M + + A+ + A +Q L G I ++K G+ S ++V L +Y K
Sbjct: 196 GDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKC 255
Query: 149 GYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGL 208
G A L++G+ +P+LVS+NA+I+G+ N + E +FK +L G + S G +
Sbjct: 256 GEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLI 315
Query: 209 EICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLI 268
+ L +H K + SN V + +YS+ N I A F EK L
Sbjct: 316 PVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLA 375
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
SWN I+ + EK +S+F+EM VRP+ T SIL+ACA L ++ GK +H
Sbjct: 376 SWNAMISGYAQNGLTEKAISLFQEMQKCE-VRPNPVTVTSILSACAQLGALSLGKWVHDL 434
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
+ R ++ V AL++MYAKCG I+ + +LF+ M +N V+WN +I+ + H G A
Sbjct: 435 INRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEA 494
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID 448
L LF +M + + P VTF+ +L AC+HAGLV+EG+ F SM +G P EH+ C++D
Sbjct: 495 LNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVD 554
Query: 449 LLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSP 508
LLGRAG L +A ++ +K P+ P V G LL AC + +D + + +LF L P
Sbjct: 555 LLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGY 614
Query: 509 YVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
YVLLSN+Y++ + + A R ++K L K P ++IEV T FT + SH + I
Sbjct: 615 YVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQATAI 674
Query: 569 NYMLKTLS 576
ML+ L+
Sbjct: 675 YAMLEKLT 682
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 172/333 (51%), Gaps = 6/333 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ +++++L ++ + L G+ + +K+G V + LY+KCG++ AR +F
Sbjct: 207 STTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFG 266
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGI----QSLV 117
++ + +LVS++AMISG+ E ++ F ++ L+ E + +S+I + L
Sbjct: 267 QIGQPDLVSYNAMISGYTCNNETESSVRLFKEL-LVSGEKVNSSSIVGLIPVFFPFGHLH 325
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+ IH + K G S S V +L ++Y ++ A L++ E+ E +L S+NA+I+G+
Sbjct: 326 LTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYA 385
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+N EK +F+ M + + P+ + L C+ L G +H L + ESN F
Sbjct: 386 QNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIF 445
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V ++ +Y+K I EA++ F ++ EK+ ++WN I+ + L++F EM +
Sbjct: 446 VSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSR 505
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
V P TF S+L AC+ V+ G +I ++
Sbjct: 506 -VSPTGVTFLSVLYACSHAGLVREGDEIFRSMV 537
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 134/259 (51%), Gaps = 5/259 (1%)
Query: 154 ALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL-PDRFSFAGGLEICS 212
A L++ P+L +N LI F N P ++ + + L PD F++A + S
Sbjct: 61 ASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAF---VIS 117
Query: 213 VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNT 272
++ L G++LH ++ S+ FVG+ I+A Y KF+ + A K F + E+D + WNT
Sbjct: 118 GASSLGLGLLLHAHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNT 177
Query: 273 FIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
++ + +++ + +F +M G+ D T A++L A L + G I +++
Sbjct: 178 MVSGLVKNSCFDEAILIFGDMVKG-GIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKV 236
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
+ V L +Y+KCG I + LF ++ ++VS+N +I+ + + S+++LF
Sbjct: 237 GFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLF 296
Query: 393 EQMKATGIKPDSVTFIGLL 411
+++ +G K +S + +GL+
Sbjct: 297 KELLVSGEKVNSSSIVGLI 315
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 3/165 (1%)
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
S I +A F I DL +N I A S +S++ + + PD+FT+
Sbjct: 53 SHLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTY 112
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
A +++ + L I D+ VG+A+V Y K ++ + K+F+ ML
Sbjct: 113 AFVISGASSLGLGLLLHAHS---IVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLE 169
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
R+ V WNT+++ + A+ +F M GI DS T +L
Sbjct: 170 RDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVL 214
>gi|38567725|emb|CAE76014.1| B1358B12.23 [Oryza sativa Japonica Group]
Length = 918
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 179/570 (31%), Positives = 313/570 (54%), Gaps = 13/570 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
++++ S L C L G LH +K G+ V + + ++Y KC AR +F
Sbjct: 215 SRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFP 274
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
E+ E++LVSW+++I + +AG A+E F M L P+E + + ++ +
Sbjct: 275 ELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRG 334
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ HA ++ + +GN+LISMY K A V+ + + S+++++ + +
Sbjct: 335 GKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCK 394
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVS-----NDLRKGMILHCLTVKCKLE 233
K E+++ M Q D F + I +S LR G HC ++K
Sbjct: 395 AGLDLKCLELYREM--QFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAG 452
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
N V N ++++Y + A K F +++ KD+++W+ I++ SH + L ++ +M
Sbjct: 453 ENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQM 512
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
+ GV+P+ T S++++CA LA+++HG+ IH+H+ + L D+ + ALV+MY KCG
Sbjct: 513 LTE-GVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQ 571
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ + K+F+ ML R+VV+WN +I+ + H ALKLF M+ +KP+S+TF+ +L+A
Sbjct: 572 LGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSA 631
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C HAGLV +G F ME+ Y + P+++H+ C++DLLG++G L EAE+ P+ D
Sbjct: 632 CCHAGLVDKGRELFTRMEE-YSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGG 690
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
+ GTLL AC++ + +G R+AK+ F P Y+L+SN Y S W ++ R M+K
Sbjct: 691 IWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEKWNEIEKLRDMMK 750
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHS 563
+ G++K +S I++ G F K + ++ HS
Sbjct: 751 NHGVEKSIGWSTIDICG-FMKNQLTQWQHS 779
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 234/455 (51%), Gaps = 19/455 (4%)
Query: 17 ALQQGISLHAAVLKMGI---QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSA 73
AL G ++HA ++ G+ V V++ ++ +YA+CG + A ++FDEM ER++V+W+A
Sbjct: 122 ALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTA 181
Query: 74 MISGHHQAGEHLLALEFFSQM-------HLLPNEYIFASAISACAGIQSLVKGQQIHAYS 126
+ISG G+ L + +M PN S + AC + L G +H +
Sbjct: 182 VISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFG 241
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
+K G V +SL SMY K + DA +++ E E +LVS+ +LI + EK
Sbjct: 242 VKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAV 301
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
E+F M GL PD + L +R G H V+ + +GN ++++Y
Sbjct: 302 ELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMY 361
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
+K + A FR++ ++D SW++ + A K L +++EM D+F +
Sbjct: 362 AKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRD---KDEFEY 418
Query: 307 AS-----ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
+ I+++C+ L ++ G+ H + I+ ++ V NAL++MY +CG + K+F
Sbjct: 419 DTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIF 478
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ ++VV+W+ +I+++++ AL L++QM G+KP+S T + ++++C + ++
Sbjct: 479 GMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALE 538
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
GE +S K G+ D+ T L+D+ + G+L
Sbjct: 539 HGE-LIHSHVKDVGLECDLSICTALVDMYMKCGQL 572
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 192/385 (49%), Gaps = 13/385 (3%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
+LHA + G+ P + +++ Y+ G LA F + W++++ H+A
Sbjct: 27 TLHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRAS 86
Query: 83 EHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGY----ASIS 135
+ L +M P+ + SA A + +L G +HAYS++FG S++
Sbjct: 87 DFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVA 146
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
V +SL+ MY + G DA+ ++ E E ++V++ A+I+G V N Q +G M+R
Sbjct: 147 -VASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRS 205
Query: 196 ----GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
G P+ + GLE C V +L G LH VK + P V +++ ++Y+K +
Sbjct: 206 AGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDS 265
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+A F + EKDL+SW + I A EK + +F M + G++PD+ + +LA
Sbjct: 266 TEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGM-EESGLQPDEVVISCLLA 324
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
A V+ GK HA ++R V +GNAL++MYAKC + + +F + R+ S
Sbjct: 325 GLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDS 384
Query: 372 WNTIIAAHANHRLGGSALKLFEQMK 396
W++++ A+ L L+L+ +M+
Sbjct: 385 WSSMVVAYCKAGLDLKCLELYREMQ 409
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 6/311 (1%)
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+HA ++ G + L+S Y G + A L + + P+ +N+L+
Sbjct: 28 LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL---ESNPFV 238
+ M G P RF+ + L G +H +V+ L + + V
Sbjct: 88 FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM---SN 295
++++ +Y++ + +A + F + E+D+++W I+ C +GLS M +
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
D G RP+ T S L AC L + G +H ++ + V ++L +MY KC
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTE 267
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ LF E+ +++VSW ++I A+ A++LF M+ +G++PD V LL
Sbjct: 268 DARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLG 327
Query: 416 HAGLVKEGEAY 426
+ V+ G+ +
Sbjct: 328 NDAKVRGGKTF 338
>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
Length = 778
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/559 (31%), Positives = 299/559 (53%), Gaps = 6/559 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+ S+L C + G+ +H VLK G+ V + N ++++Y K G + + VF+ M
Sbjct: 222 SLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDLESSMHVFNGM 281
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFF---SQMHLLPNEYIFASAISACAGIQSLVKGQ 120
E+N VSW++ I AG H LE F S+ + P +S + A + G+
Sbjct: 282 QEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALVDLGYFHLGK 341
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H YS++ S F+ N+L+ MY K G S A ++ N+VS+NA+IA +N
Sbjct: 342 ELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIANLTQNG 401
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ F + M + G P+ F+ L CS ++ G +H +++ L S+ FV N
Sbjct: 402 AEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRSLMSDLFVSN 461
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y+K + A F EKD +S+NT I S + L +F++M G+
Sbjct: 462 ALIDVYAKCGQLNLARYIFDR-SEKDGVSYNTLIVGYSQSQCCFESLHLFQQM-RLAGIE 519
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D +F L+AC+ L++ + GK+IH L++ L+ + N+L+++Y K G++ + K+
Sbjct: 520 HDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANSLLDVYTKGGMLDTASKI 579
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN + ++V SWNT+I + H A +LF+ MK GI+ D V++I +L+ C+H GLV
Sbjct: 580 FNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSYIAVLSVCSHGGLV 639
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
G+ YF+ M I P H+ C++DLLGRAG+L E+ E + P + V G LL
Sbjct: 640 DRGKKYFSQM-IAQNIKPQQMHYACMVDLLGRAGQLSESAEIIRNMPFRANSDVWGALLG 698
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
+CR+ D+ + A+ LF L+P + Y LL N+Y+ GMW + G +K++K ++K
Sbjct: 699 SCRIHGDIELARLAAEHLFELKPENSGYYTLLRNMYSESGMWNEANGVKKLMKSRKVQKN 758
Query: 541 PSYSMIEVQGTFEKFTVAE 559
P+YS ++ + F V +
Sbjct: 759 PAYSWVQSGNKLQAFLVGD 777
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 135/409 (33%), Positives = 221/409 (54%), Gaps = 6/409 (1%)
Query: 20 QGISLHAAVLKMGIQ-PDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGH 78
+G LHAA L+ G+ DV N ++ YA CG+ AR+VFDEM R++VSW++++S
Sbjct: 136 KGAELHAAALRRGLLLADVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSAL 195
Query: 79 HQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS 135
G + A+ + + N S + AC + G +H LKFG S+
Sbjct: 196 LTNGMLEDAKRAVVGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVV 255
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
+GN+L+ MY K G ++ V+ E N VS+N+ I F E E+F+LM
Sbjct: 256 NLGNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEH 315
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
+ P + + L G LH +++ +ES+ F+ NT+M +Y+KF +A
Sbjct: 316 DVTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKA 375
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
F IE ++++SWN IA + + + EM + G P+ FT ++L AC+
Sbjct: 376 SAIFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKN-GECPNSFTLVNLLPACSR 434
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
+ASV+ GKQIHA IR L D+ V NAL+++YAKCG ++ + +F+ ++ VS+NT+
Sbjct: 435 VASVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDRS-EKDGVSYNTL 493
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
I ++ + +L LF+QM+ GI+ D+V+F+G L+AC++ K+G+
Sbjct: 494 IVGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGK 542
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 186/369 (50%), Gaps = 6/369 (1%)
Query: 118 KGQQIHAYSLKFGYA-SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
KG ++HA +L+ G + F GN+L++ Y G ++DA V+ E ++VS+N+L++
Sbjct: 136 KGAELHAAALRRGLLLADVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSAL 195
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
+ N E M+R G+ + S L C D G+ +H L +K L S
Sbjct: 196 LTNGMLEDAKRAVVGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVV 255
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
+GN ++ +Y KF + + F ++EK+ +SWN+ I +H +E L +F+ MS +
Sbjct: 256 NLGNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMS-E 314
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
H V P T +S+L A L GK++H + IR + D+ + N L++MYAK G
Sbjct: 315 HDVTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEK 374
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ +F + RNVVSWN +IA + A +L +M+ G P+S T + LL AC+
Sbjct: 375 ASAIFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSR 434
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE---EYTKKFPLGQDPI 473
VK G+ ++ + D+ LID+ + G+L A + ++K + + +
Sbjct: 435 VASVKMGKQ-IHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDRSEKDGVSYNTL 493
Query: 474 VLGTLLSAC 482
++G S C
Sbjct: 494 IVGYSQSQC 502
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 56/107 (52%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A S L CS A +QG +H ++K + ++N +L++Y K G + A K+F+
Sbjct: 522 AVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANSLLDVYTKGGMLDTASKIFN 581
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAIS 108
++++++ SW+ MI G+ G+ +A E F M EY S I+
Sbjct: 582 RITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSYIA 628
>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 189/580 (32%), Positives = 314/580 (54%), Gaps = 6/580 (1%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
++ S + L CS+++ G +H V+KMG+ D V +L++Y+KCG + A VF
Sbjct: 271 VSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVF 330
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFS---QMHLLPNEYIFASAISACAGIQSLV 117
+ ++ L W+AM++ + + AL+ F Q +LP+ + ++ IS C+ +
Sbjct: 331 SCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYN 390
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+ +HA K S S + ++L+++Y K G DA LV+ E ++V++ +LI+G
Sbjct: 391 YGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLC 450
Query: 178 ENQQPEKGFEVFKLMLRQ--GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+N + ++ +VF M L PD C+ LR G+ +H +K L N
Sbjct: 451 KNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLN 510
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
FVG++++ LYSK L A K F + +++++WN+ I+ S E + +F M +
Sbjct: 511 VFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLS 570
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
G+ PD + S+L A + AS+ GK +H + +R+ + D + NAL++MY KCG
Sbjct: 571 -QGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSK 629
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ +F +M H+++++WN +I + +H +AL LF++MK G PD VTF+ L++ACN
Sbjct: 630 YAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACN 689
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
H+G V+EG+ F M++ YGI P++EH+ ++DLLGRAG L EA + K P+ D +
Sbjct: 690 HSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIW 749
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
LLSA R +V +G A++L ++P S YV L NLY G+ + A ++K+
Sbjct: 750 LCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEK 809
Query: 536 GLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
GL K+P S IEV F S EI +L L
Sbjct: 810 GLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRL 849
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 136/466 (29%), Positives = 233/466 (50%), Gaps = 17/466 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SLL CS L G ++H +V+ +G + D ++ ++N+Y KCG + A +VFD
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 64 SE-------RNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACA-- 111
S+ R++ W++MI G+ + + F +M + P+ + + +S
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 112 GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE-PNLVSFN 170
G +G+QIH + L+ + SF+ +LI MY K G S DA V+ E + N+V +N
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWN 241
Query: 171 ALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC 230
+I GF + E +++ L + SF G L CS S + G +HC VK
Sbjct: 242 VMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKM 301
Query: 231 KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVF 290
L ++P+V +++++YSK ++GEAE F + +K L WN +AA + L +F
Sbjct: 302 GLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLF 361
Query: 291 KEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
M V PD FT +++++ C+ L +GK +HA L + + + +AL+ +Y+K
Sbjct: 362 GFM-RQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSK 420
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK--ATGIKPDSVTFI 408
CG +Y +F M +++V+W ++I+ + ALK+F MK +KPDS
Sbjct: 421 CGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMT 480
Query: 409 GLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
+ AC ++ G SM KT G+ ++ + LIDL + G
Sbjct: 481 SVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSLIDLYSKCG 525
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 190/360 (52%), Gaps = 15/360 (4%)
Query: 80 QAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS 135
Q GE+L AL +S+ + + F S + AC+ + +L G+ IH + G+
Sbjct: 36 QKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDP 95
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEP-------NLVSFNALIAGFVENQQPEKGFEV 188
F+ SL++MY+K G+ A+ V+ + ++ +N++I G+ + ++ ++G
Sbjct: 96 FIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGC 155
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRK--GMILHCLTVKCKLESNPFVGNTIMALY 246
F+ ML G+ PD FS + + + + R+ G +H ++ L+++ F+ ++ +Y
Sbjct: 156 FRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMY 215
Query: 247 SKFNLIGEAEKAFRLIEEK-DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFT 305
KF L +A + F IE+K +++ WN I E L ++ ++ ++ V+ +
Sbjct: 216 FKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYM-LAKNNSVKLVSTS 274
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
F L AC+ + G+QIH +++M L+ D V +L++MY+KCG++ + +F+ ++
Sbjct: 275 FTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVV 334
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
+ + WN ++AA+A + G SAL LF M+ + PDS T +++ C+ GL G++
Sbjct: 335 DKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKS 394
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
S N+ I A +Y + L ++ + FTF S+L AC+ L ++ +GK IH
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH-------RNVVSWNTIIAAHAN 381
++ + D + +LVNMY KCG + + ++F+ R+V WN++I +
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 382 HRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI----S 437
R + F +M G++PD+ + +++ + KEG ++ +G S
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSV-----MCKEGNFRREEGKQIHGFMLRNS 200
Query: 438 PDIEHF--TCLIDLLGRAGKLLEA 459
D + F T LID+ + G ++A
Sbjct: 201 LDTDSFLKTALIDMYFKFGLSIDA 224
>gi|297741566|emb|CBI32698.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 183/514 (35%), Positives = 285/514 (55%), Gaps = 50/514 (9%)
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
M ERN+VSW+++I+G+ Q G+ ALEF+ QM ++P+++ F S I AC+ + + G
Sbjct: 1 MPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLG 60
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+HA+ LK + + N+LISMY K DAL V+ +L+S+ ++IAGF +
Sbjct: 61 RQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQL 120
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ FK ML QG PD ++
Sbjct: 121 GYELEALCYFKEMLHQGR-PDLVAW----------------------------------- 144
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEE----KDLISWNTFIAACSHCADYEKGLSVFKEMS- 294
N I+A ++ GE A EE DL+SWN + AC E+ + K M
Sbjct: 145 NAIIAGFA----YGELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCI 200
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
+ H RPD T ++L A A S++ G Q+H + ++ LN D V N L+++YAKCG +
Sbjct: 201 SQH--RPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSL 258
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
++K+F+ M++ +VVSW+++I +A G ALKLF+ M+ +KP+ VTF+G+LTAC
Sbjct: 259 KTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTAC 318
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
+H GLV+EG + +MEK +GI+P EH +C++DLL RAG L EAE + + D +V
Sbjct: 319 SHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVV 378
Query: 475 LGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKD 534
TLL+AC+ +V +G+R A+ + + P+ ++ +VLL N+YAS G W DVA R ++K
Sbjct: 379 WKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNIYASKGNWEDVARLRSLMKQ 438
Query: 535 SGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
G++K P S IEV+ F V + H + +I
Sbjct: 439 RGVRKVPGQSWIEVKDRIHVFFVEDSLHPERNKI 472
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 179/397 (45%), Gaps = 53/397 (13%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S++ CS + G LHA VLK +I N ++++Y K +I A VF M
Sbjct: 43 TFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRM 102
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM-HLLPNEYIFASAISACAGIQSLVKGQQI 122
+ R+L+SW +MI+G Q G L AL +F +M H + + +AI A
Sbjct: 103 ATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGRPDLVAWNAIIA------------- 149
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGE-AFEPNLVSFNALIAGFVENQQ 181
F Y + DA+ + E +LVS+NA++ + + Q
Sbjct: 150 -----GFAYGEL-----------------RDAIFFFEEMRCNADLVSWNAILTACMRHDQ 187
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
E+ F + KLM PD + L + + + G +HC +K L + V N
Sbjct: 188 AEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNG 247
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ LY+K + A K F + D++SW++ I + E+ L +FK M V+P
Sbjct: 248 LIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRR-LDVKP 306
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG------NALVNMYAKCGLIS 355
+ TF +L AC+ + V+ G +++ + ++ G+ + +V++ A+ G ++
Sbjct: 307 NHVTFVGVLTACSHVGLVEEGWKLYG-----TMEKEFGIAPTREHCSCMVDLLARAGCLN 361
Query: 356 CSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSA 388
+ ++M ++V W T++AA H N +G A
Sbjct: 362 EAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRA 398
>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 183/577 (31%), Positives = 309/577 (53%), Gaps = 6/577 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+S L C+ + L G +H + K+ I D+ V + +++LY KCG+M A KVF E
Sbjct: 244 SVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEY 303
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKG 119
+ ++V W+++ISG+ Q+G LAL FFS+M + P+ S SACA + + G
Sbjct: 304 PKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLG 363
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ +H + + G + + NSL+ +Y K G +A ++ E + +++S++ ++A + +N
Sbjct: 364 RSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADN 423
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
++F ML + + P+ + L C+ ++L +GM +H L V E V
Sbjct: 424 GAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVS 483
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+M +Y K +A F + +KD+I+W + + + + VF+ M + G
Sbjct: 484 TALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSS-GT 542
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
RPD IL + L +Q +HA +I+ + +G +L+ +YAKC I + K
Sbjct: 543 RPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANK 602
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTACNHAG 418
+F M +++VV+W++IIAA+ H G ALKLF QM + KP++VTFI +L+AC+H+G
Sbjct: 603 VFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSG 662
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
L+KEG F+ M Y + P+ EH+ ++DLLGR G+L A + P+ P + G L
Sbjct: 663 LIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGAL 722
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L ACR+ +++ +GE AK LF L P Y+LLSN+Y+ D W R+++K+ L
Sbjct: 723 LGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLN 782
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
K S++E++ F + H + I +L L
Sbjct: 783 KIVGQSVVELKNEVRSFIAGDRIHDESDHIYEILTKL 819
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 222/425 (52%), Gaps = 13/425 (3%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C ++ Q LH+ LK G+ D + + LYA+ + A K+F E R
Sbjct: 145 LLETCCSKLSISQ---LHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRT 201
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLL--------PNEYIFASAISACAGIQSLVKG 119
+ W+A++ + GE + L F QM+ + P+ Y + A+ +CAG++ L+ G
Sbjct: 202 VYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLG 261
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ IH + K FVG++LI +Y K G +DA+ V+ E +P++V + ++I+G+ ++
Sbjct: 262 KVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQS 321
Query: 180 QQPEKGFEVF-KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
PE F ++++ + + PD + C+ ++ + G +H + L++ +
Sbjct: 322 GSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCL 381
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N+++ LY K I A FR + +KD+ISW+T +A + L +F EM D
Sbjct: 382 ANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEML-DKR 440
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
++P+ T S+L ACA +++++ G +IH + + V AL++MY KC +
Sbjct: 441 IKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAV 500
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
LFN M ++V++W + + +A++ + ++ +F M ++G +PD++ + +LT + G
Sbjct: 501 DLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELG 560
Query: 419 LVKEG 423
++++
Sbjct: 561 ILQQA 565
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 174/366 (47%), Gaps = 7/366 (1%)
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H+ LK G SF+ L +Y + A ++ E + +NAL+ +
Sbjct: 157 QLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEG 216
Query: 181 QPEKGFEVFKLMLRQGLL-----PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+ + +F+ M + PD +S + L+ C+ L G ++H K +++ +
Sbjct: 217 EWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGD 276
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
FVG+ ++ LY+K + +A K F + D++ W + I+ E L+ F M
Sbjct: 277 MFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVV 336
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
V PD T S+ +ACA L++ + G+ +H + R L+ + + N+L+++Y K G I
Sbjct: 337 SEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIK 396
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ LF EM ++++SW+T++A +A++ L LF +M IKP+ VT + +L AC
Sbjct: 397 NASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACA 456
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
++EG + + YG + T L+D+ + +A + + P +D I
Sbjct: 457 CISNLEEG-MKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP-KKDVIAW 514
Query: 476 GTLLSA 481
L S
Sbjct: 515 AVLFSG 520
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++ +L S+ LQQ + LHA V+K G + + + ++ +YAKC + A KVF
Sbjct: 546 AIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFK 605
Query: 62 EMSERNLVSWSAMIS--GHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACA 111
M+ +++V+WS++I+ G H GE AL+ F QM PN F S +SAC+
Sbjct: 606 GMTYKDVVTWSSIIAAYGFHGQGEE--ALKLFYQMANHSDTKPNNVTFISILSACS 659
>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial [Vitis vinifera]
gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 195/583 (33%), Positives = 312/583 (53%), Gaps = 14/583 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S+ CSK L+ +H V+K Q D+ V V+++Y KC ++ A +F M
Sbjct: 56 TFPSVAKACSKLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRM 115
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACA------GIQSLV 117
+R++ SW++MI G Q G + F +M + E I A +++ ++ L
Sbjct: 116 PKRDVASWNSMILGFAQLGFVDRVVSLFCEMGI---EGIRADSVTVIGLTHSALSLKDLK 172
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNL---VSFNALIA 174
+ IH++ +K G + V N+ I+ Y K G A V+ + + L VS+N++IA
Sbjct: 173 MLESIHSFGIKIGIDTDVSVSNTWIAAYAKCGEFGLAETVF-DGIDKGLKTGVSWNSMIA 231
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
G+ +Q K FK ML G D + L C L G ++H ++ +S
Sbjct: 232 GYAHFEQCSKAVGFFKKMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDS 291
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
+ V NT++++YSK IG A F + K +SW IA + D ++ +++F M
Sbjct: 292 DIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAME 351
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
G +PD T S+++ C +++ GK I + L ++ V NAL+++YAKCG +
Sbjct: 352 A-VGEKPDLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSM 410
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ +LF M +++VSW T+IA A + AL LF QM G+KP+ +TF+ +L AC
Sbjct: 411 DNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQAC 470
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
NHAG +++G FN M K Y I+P ++H++C+ DLLGR G+L EA E+ + P D +
Sbjct: 471 NHAGFLEKGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGI 530
Query: 475 LGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKD 534
LLSAC++ ++VVIGE +A LF L+P T PYV ++N+YAS G W VA R M+K
Sbjct: 531 WSVLLSACKIHQNVVIGECVAYHLFELEPQTAVPYVQMANIYASAGKWDRVAAIRTMMKC 590
Query: 535 SGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
+ K P S+++V G +FTV + H + I L+ L+L
Sbjct: 591 NKAMKSPGKSLVQVNGKTHEFTVEDRCHPEGLLIYETLENLAL 633
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 128/435 (29%), Positives = 212/435 (48%), Gaps = 9/435 (2%)
Query: 56 ARKVFDEMSE-RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
A + F+ S + W++ I+ G AL F QM L PN F S AC+
Sbjct: 6 ATQSFNRFSNLWTVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACS 65
Query: 112 GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNA 171
+ +L Q +H + +K + + FV S++ MY+K A ++ + ++ S+N+
Sbjct: 66 KLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNS 125
Query: 172 LIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK 231
+I GF + ++ +F M +G+ D + G DL+ +H +K
Sbjct: 126 MILGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIG 185
Query: 232 LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE--KDLISWNTFIAACSHCADYEKGLSV 289
++++ V NT +A Y+K G AE F I++ K +SWN+ IA +H K +
Sbjct: 186 IDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGF 245
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
FK+M G R D T S+L++C + HGK IHAH I++ + D+ V N L++MY+
Sbjct: 246 FKKMLCG-GFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYS 304
Query: 350 KCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
KCG I + LF+ ML + VSW +IA +A A+ LF M+A G KPD VT I
Sbjct: 305 KCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTIIS 364
Query: 410 LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLG 469
L++ C G ++ G+ + ++ G+ ++ LID+ + G + A E P
Sbjct: 365 LMSGCGQTGALELGK-WIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMP-E 422
Query: 470 QDPIVLGTLLSACRL 484
+ + TL++ C L
Sbjct: 423 KSLVSWTTLIAGCAL 437
>gi|222629009|gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japonica Group]
Length = 897
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 179/570 (31%), Positives = 313/570 (54%), Gaps = 13/570 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
++++ S L C L G LH +K G+ V + + ++Y KC AR +F
Sbjct: 215 SRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFP 274
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
E+ E++LVSW+++I + +AG A+E F M L P+E + + ++ +
Sbjct: 275 ELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRG 334
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ HA ++ + +GN+LISMY K A V+ + + S+++++ + +
Sbjct: 335 GKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCK 394
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVS-----NDLRKGMILHCLTVKCKLE 233
K E+++ M Q D F + I +S LR G HC ++K
Sbjct: 395 AGLDLKCLELYREM--QFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAG 452
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
N V N ++++Y + A K F +++ KD+++W+ I++ SH + L ++ +M
Sbjct: 453 ENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQM 512
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
+ GV+P+ T S++++CA LA+++HG+ IH+H+ + L D+ + ALV+MY KCG
Sbjct: 513 LTE-GVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQ 571
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ + K+F+ ML R+VV+WN +I+ + H ALKLF M+ +KP+S+TF+ +L+A
Sbjct: 572 LGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSA 631
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C HAGLV +G F ME+ Y + P+++H+ C++DLLG++G L EAE+ P+ D
Sbjct: 632 CCHAGLVDKGRELFTRMEE-YSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGG 690
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
+ GTLL AC++ + +G R+AK+ F P Y+L+SN Y S W ++ R M+K
Sbjct: 691 IWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEKWNEIEKLRDMMK 750
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHS 563
+ G++K +S I++ G F K + ++ HS
Sbjct: 751 NHGVEKSIGWSTIDICG-FMKNQLTQWQHS 779
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 234/455 (51%), Gaps = 19/455 (4%)
Query: 17 ALQQGISLHAAVLKMGI---QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSA 73
AL G ++HA ++ G+ V V++ ++ +YA+CG + A ++FDEM ER++V+W+A
Sbjct: 122 ALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTA 181
Query: 74 MISGHHQAGEHLLALEFFSQM-------HLLPNEYIFASAISACAGIQSLVKGQQIHAYS 126
+ISG G+ L + +M PN S + AC + L G +H +
Sbjct: 182 VISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFG 241
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
+K G V +SL SMY K + DA +++ E E +LVS+ +LI + EK
Sbjct: 242 VKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAV 301
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
E+F M GL PD + L +R G H V+ + +GN ++++Y
Sbjct: 302 ELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMY 361
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
+K + A FR++ ++D SW++ + A K L +++EM D+F +
Sbjct: 362 AKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRD---KDEFEY 418
Query: 307 AS-----ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
+ I+++C+ L ++ G+ H + I+ ++ V NAL++MY +CG + K+F
Sbjct: 419 DTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIF 478
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ ++VV+W+ +I+++++ AL L++QM G+KP+S T + ++++C + ++
Sbjct: 479 GMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALE 538
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
GE +S K G+ D+ T L+D+ + G+L
Sbjct: 539 HGE-LIHSHVKDVGLECDLSICTALVDMYMKCGQL 572
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 192/385 (49%), Gaps = 13/385 (3%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
+LHA + G+ P + +++ Y+ G LA F + W++++ H+A
Sbjct: 27 TLHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRAS 86
Query: 83 EHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGY----ASIS 135
+ L +M P+ + SA A + +L G +HAYS++FG S++
Sbjct: 87 DFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVA 146
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
V +SL+ MY + G DA+ ++ E E ++V++ A+I+G V N Q +G M+R
Sbjct: 147 -VASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRS 205
Query: 196 ----GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
G P+ + GLE C V +L G LH VK + P V +++ ++Y+K +
Sbjct: 206 AGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDS 265
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+A F + EKDL+SW + I A EK + +F M + G++PD+ + +LA
Sbjct: 266 TEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGM-EESGLQPDEVVISCLLA 324
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
A V+ GK HA ++R V +GNAL++MYAKC + + +F + R+ S
Sbjct: 325 GLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDS 384
Query: 372 WNTIIAAHANHRLGGSALKLFEQMK 396
W++++ A+ L L+L+ +M+
Sbjct: 385 WSSMVVAYCKAGLDLKCLELYREMQ 409
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 144/323 (44%), Gaps = 7/323 (2%)
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+HA ++ G + L+S Y G + A L + + P+ +N+L+
Sbjct: 28 LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL---ESNPFV 238
+ M G P RF+ + L G +H +V+ L + + V
Sbjct: 88 FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM---SN 295
++++ +Y++ + +A + F + E+D+++W I+ C +GLS M +
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
D G RP+ T S L AC L + G +H ++ + V ++L +MY KC
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTE 267
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ LF E+ +++VSW ++I A+ A++LF M+ +G++PD V LL
Sbjct: 268 DARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLG 327
Query: 416 HAGLVKEGEAYFNSM-EKTYGIS 437
+ V+ G+ + ++ + +G S
Sbjct: 328 NDAKVRGGKTFHAAIVRRNFGDS 350
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 174/552 (31%), Positives = 302/552 (54%), Gaps = 6/552 (1%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G HA V+KM D+ V ++ +Y K G + KVF M ERN +WS M+SG+
Sbjct: 137 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYAT 196
Query: 81 AGEHLLALEFFS-----QMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS 135
G A++ F+ + ++Y+F + +S+ A + G+QIH ++K G
Sbjct: 197 RGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFV 256
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
+ N+L++MY K ++A ++ + + N ++++A++ G+ +N + + ++F M
Sbjct: 257 ALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSA 316
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
G+ P ++ G L CS L +G LH +K E + F ++ +Y+K + +A
Sbjct: 317 GIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADA 376
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
K F ++E+D+ W + I+ +D E+ L +++ M G+ P+D T AS+L AC+
Sbjct: 377 RKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKT-AGIIPNDPTMASVLKACSS 435
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
LA+++ GKQ+H H I+ +V +G+AL MY+KCG + +F +++VVSWN +
Sbjct: 436 LATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAM 495
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYG 435
I+ +++ G AL+LFE+M A G++PD VTF+ +++AC+H G V+ G YFN M G
Sbjct: 496 ISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIG 555
Query: 436 ISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLA 495
+ P ++H+ C++DLL RAG+L EA+E+ + + + LLSAC+ +G
Sbjct: 556 LDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAG 615
Query: 496 KQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKF 555
++L L +S YV LS +Y + G DV K ++ +G+ KE S IE++ + F
Sbjct: 616 EKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVF 675
Query: 556 TVAEFSHSKIGE 567
V + H I E
Sbjct: 676 VVGDTMHPMIEE 687
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 250/487 (51%), Gaps = 16/487 (3%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+ L HH S+ + L G ++H +++ G + +N ++N YAKCGK+ A +F+ +
Sbjct: 18 LKKLTHH-SQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAII 76
Query: 65 ERNLVSWSAMISGHHQAG---EHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
+++VSW+++I+G+ Q G ++ F +M +LPN Y A A + +QS
Sbjct: 77 CKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTV 136
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+Q HA +K +V SL+ MY K G D L V+ E N +++ +++G+
Sbjct: 137 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYAT 196
Query: 179 NQQPEKGFEVFKLMLR---QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+ E+ +VF L LR +G D + F L + + + G +HC+T+K L
Sbjct: 197 RGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGF 255
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
+ N ++ +YSK + EA K F +++ I+W+ + S + + + +F M +
Sbjct: 256 VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFS 315
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
G++P ++T +L AC+ + ++ GKQ+H+ L+++ + + ALV+MYAK G ++
Sbjct: 316 -AGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLA 374
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ K F+ + R+V W ++I+ + + AL L+ +MK GI P+ T +L AC+
Sbjct: 375 DARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACS 434
Query: 416 HAGLVKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
++ G + + ++++ +G+ I + L + + G L + ++ P +D +
Sbjct: 435 SLATLELGKQVHGHTIKHGFGLEVPIG--SALSTMYSKCGSLEDGNLVFRRTP-NKDVVS 491
Query: 475 LGTLLSA 481
++S
Sbjct: 492 WNAMISG 498
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 188/378 (49%), Gaps = 15/378 (3%)
Query: 93 QMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSS 152
Q L P+ ++ + ++LV G+ +H ++ G ++ N L++ Y K G +
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 153 DALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV---FKLMLRQGLLPDRFSFAGGLE 209
A ++ ++VS+N+LI G+ +N + V F+ M Q +LP+ ++ AG +
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
S G H L VK + +V +++ +Y K L+ + K F + E++ +
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYT 186
Query: 270 WNTFIAACSHCADYEKGLSVF------KEMSNDHGVRPDDFTFASILAACAGLASVQHGK 323
W+T ++ + E+ + VF KE +D D+ F ++L++ A V G+
Sbjct: 187 WSTMVSGYATRGRVEEAIKVFNLFLREKEEGSD-----SDYVFTAVLSSLAATIYVGLGR 241
Query: 324 QIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR 383
QIH I+ L V + NALV MY+KC ++ + K+F+ RN ++W+ ++ ++ +
Sbjct: 242 QIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNG 301
Query: 384 LGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF 443
A+KLF +M + GIKP T +G+L AC+ ++EG+ + + K G +
Sbjct: 302 ESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK-LGFERHLFAT 360
Query: 444 TCLIDLLGRAGKLLEAEE 461
T L+D+ +AG L +A +
Sbjct: 361 TALVDMYAKAGCLADARK 378
>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g13270, chloroplastic; Flags: Precursor
gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 752
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 185/574 (32%), Positives = 310/574 (54%), Gaps = 5/574 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQ-PDVIVSNHVLNLYAKCGKMILARKVFDE 62
S L C + ++L G LH ++MGI+ P V++ N VL +Y +C + A K+FDE
Sbjct: 85 SYQCLFEACRELRSLSHGRLLHDR-MRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDE 143
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKG 119
MSE N VS + MIS + + G A+ FS M P ++ + + + ++L G
Sbjct: 144 MSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFG 203
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+QIHA+ ++ G S + + +++MY+K G+ A V+ + V+ L+ G+ +
Sbjct: 204 RQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQA 263
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ ++F ++ +G+ D F F+ L+ C+ +L G +H K LES VG
Sbjct: 264 GRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVG 323
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ Y K + A +AF+ I E + +SW+ I+ + +E+ + FK + + +
Sbjct: 324 TPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAS 383
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+ FT+ SI AC+ LA G Q+HA I+ L +AL+ MY+KCG + + +
Sbjct: 384 ILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANE 443
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F M + ++V+W I+ HA + AL+LFE+M + G+KP+SVTFI +LTAC+HAGL
Sbjct: 444 VFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGL 503
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V++G+ ++M + Y ++P I+H+ C+ID+ R+G L EA ++ K P D + L
Sbjct: 504 VEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFL 563
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
S C +++ +GE ++L L P T+ YVL NLY G W + A K++ + LKK
Sbjct: 564 SGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKK 623
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLK 573
E S S I+ +G +F V + H + EI LK
Sbjct: 624 ELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLK 657
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 120/247 (48%), Gaps = 5/247 (2%)
Query: 170 NALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK 229
N + ++++ + FE + M + G+ +S+ E C L G +LH ++
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLH-DRMR 110
Query: 230 CKLESNPFV--GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGL 287
+E NP V N ++ +Y + + +A+K F + E + +S T I+A + +K +
Sbjct: 111 MGIE-NPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAV 169
Query: 288 SVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNM 347
+F M G +P + ++L + ++ G+QIHAH+IR L + + +VNM
Sbjct: 170 GLFSGMLAS-GDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNM 228
Query: 348 YAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTF 407
Y KCG + + ++F++M + V+ ++ + ALKLF + G++ DS F
Sbjct: 229 YVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVF 288
Query: 408 IGLLTAC 414
+L AC
Sbjct: 289 SVVLKAC 295
>gi|356568696|ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 200/580 (34%), Positives = 309/580 (53%), Gaps = 31/580 (5%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
LH C+ ++ Q +HA VLK + D+ V+ ++ ++ C + A VF+ + N+
Sbjct: 28 LHKCTNLDSVNQ---IHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNV 84
Query: 69 VSWSAMISGH-HQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
++++I H H + L F QM L P+ + + + AC+G SL + IHA
Sbjct: 85 HLYNSIIRAHAHNSSHRSLPFNAFFQMQKNGLFPDNFTYPFLLKACSGPSSLPLVRMIHA 144
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYS--SDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
+ K G+ FV NSLI Y + G + A+ ++ E ++V++N++I G V +
Sbjct: 145 HVEKIGFYGDIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSMIGGLVRCGEL 204
Query: 183 EKGFEVFKLMLRQGLLPDR--FSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG- 239
+ ++F M PDR S+ L+ + + ++ L E P+
Sbjct: 205 QGACKLFDEM------PDRDMVSWNTMLDGYAKAGEMDTAFEL--------FERMPWRNI 250
Query: 240 ---NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
+T++ YSK + A F K+++ W T IA + + ++ +M +
Sbjct: 251 VSWSTMVCGYSKGGDMDMARMLFDRCPVKNVVLWTTIIAGYAEKGLAREATELYGKME-E 309
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
G+RPDD SILAACA + GK+IHA + R R V NA ++MYAKCG +
Sbjct: 310 AGMRPDDGFLLSILAACAESGMLGLGKRIHASMRRWRFRCGAKVLNAFIDMYAKCGCLDA 369
Query: 357 SYKLFNEML-HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
++ +F+ M+ ++VVSWN++I A H G AL+LF M G +PD+ TF+GLL AC
Sbjct: 370 AFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSWMVQEGFEPDTYTFVGLLCACT 429
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
HAGLV EG YF SMEK YGI P +EH+ C++DLLGR G L EA + P+ + I+L
Sbjct: 430 HAGLVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFMLLRSMPMEPNAIIL 489
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
GTLL+ACR+ DV + + +QLF L+P+ Y LLSN+YA G W +VA R +K++
Sbjct: 490 GTLLNACRMHNDVDLARAVCEQLFKLEPSDPGNYSLLSNIYAQAGDWMNVANVRLQMKNT 549
Query: 536 GLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
G +K S IEV+ +FTV + SH K +I M+ L
Sbjct: 550 GGEKPSGASSIEVEEEVHEFTVFDQSHPKSDDIYQMIDRL 589
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 149/323 (46%), Gaps = 15/323 (4%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMIL--ARKVFDEMSE 65
LL CS +L +HA V K+G D+ V N +++ Y++CG L A +F M E
Sbjct: 126 LLKACSGPSSLPLVRMIHAHVEKIGFYGDIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEE 185
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVK-GQQIHA 124
R++V+W++MI G + GE A + F +M P+ +S + K G+ A
Sbjct: 186 RDVVTWNSMIGGLVRCGELQGACKLFDEM---PDR----DMVSWNTMLDGYAKAGEMDTA 238
Query: 125 YSL--KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
+ L + + +I ++++ Y K G A +++ N+V + +IAG+ E
Sbjct: 239 FELFERMPWRNI-VSWSTMVCGYSKGGDMDMARMLFDRCPVKNVVLWTTIIAGYAEKGLA 297
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
+ E++ M G+ PD L C+ S L G +H + + V N
Sbjct: 298 REATELYGKMEEAGMRPDDGFLLSILAACAESGMLGLGKRIHASMRRWRFRCGAKVLNAF 357
Query: 243 MALYSKFNLIGEAEKAFR-LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+ +Y+K + A F ++ +KD++SWN+ I + EK L +F M + G P
Sbjct: 358 IDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSWMVQE-GFEP 416
Query: 302 DDFTFASILAACAGLASVQHGKQ 324
D +TF +L AC V G++
Sbjct: 417 DTYTFVGLLCACTHAGLVNEGRK 439
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 89/174 (51%), Gaps = 8/174 (4%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE-MSE 65
S+L C+++ L G +HA++ + + V N +++YAKCG + A VF M++
Sbjct: 321 SILAACAESGMLGLGKRIHASMRRWRFRCGAKVLNAFIDMYAKCGCLDAAFDVFSGMMAK 380
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQI 122
+++VSW++MI G G ALE FS M P+ Y F + AC + +G++
Sbjct: 381 KDVVSWNSMIQGFAMHGHGEKALELFSWMVQEGFEPDTYTFVGLLCACTHAGLVNEGRK- 439
Query: 123 HAYSLKFGYASISFVGN--SLISMYMKVGYSSDA-LLVYGEAFEPNLVSFNALI 173
+ YS++ Y + V + ++ + + G+ +A +L+ EPN + L+
Sbjct: 440 YFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFMLLRSMPMEPNAIILGTLL 493
>gi|449450476|ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 692
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 185/558 (33%), Positives = 298/558 (53%), Gaps = 22/558 (3%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G+ HA +K DV V + ++N+Y K G M+ ARKVFD + ERN VSW+ +ISG+
Sbjct: 132 GLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAM 191
Query: 81 AGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
A E F M +++I+ S +SA + G+QIH +LK G SI+ V
Sbjct: 192 ERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASV 251
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
GN+L++MY K G DA + + + + ++++A+I G+ + + +F M G
Sbjct: 252 GNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGN 311
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
P F+F G + CS L +G +H ++K E + L +K + +A K
Sbjct: 312 KPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVDARK 371
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F ++E D++ W S +M + P + T AS+L AC+ LA
Sbjct: 372 GFDYLKEPDIVLWT----------------SCRMQMER---IMPHELTMASVLRACSSLA 412
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
+++ GKQIHA I+ + +V +G+AL MYAKCG + +F M R++++WN +I+
Sbjct: 413 ALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMIS 472
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
+ + G AL+LFE+++ KPD VTF+ +L+AC+H GLV+ G+ YF M +GI
Sbjct: 473 GLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGII 532
Query: 438 PDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQ 497
P +EH+ C++D+L RAGKL E +E+ + + + LL ACR R+ +G ++
Sbjct: 533 PRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEK 592
Query: 498 LFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTV 557
L L +S Y+LLS++Y + G DV R+++K G+ KEP S IE++ F V
Sbjct: 593 LMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVV 652
Query: 558 AEFSHSKIGEINYMLKTL 575
+ H +I +I L+ L
Sbjct: 653 GDQIHPQIVKICSELRRL 670
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 148/544 (27%), Positives = 270/544 (49%), Gaps = 32/544 (5%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+S LL C++ K LQ+G ++HA +L+ G V ++N ++NLYAKCG ++ A+ VF+
Sbjct: 11 RSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFES 70
Query: 63 MSERNLVSWSAMISGHHQAGE--HLLALEFFSQM---HLLPNEYIFASAISACAGIQSLV 117
++ +++VSW+ +I+G+ Q G + +E F +M + LPN + F+ +A +
Sbjct: 71 ITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETF 130
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G Q HA ++K FVG+SLI+MY K+G DA V+ E N VS+ +I+G+
Sbjct: 131 GGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYA 190
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ + +E+F LM R+ D+F + L +V + + G +HCL +K L S
Sbjct: 191 MERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIAS 250
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
VGN ++ +Y K + +A K F L +KD I+W+ I + D + L++F M + +
Sbjct: 251 VGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNM-HLN 309
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G +P +FTF ++ AC+ + +++ GKQIH + ++ + + AKCG + +
Sbjct: 310 GNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVDA 369
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
K F+ + ++V W + +M+ I P +T +L AC+
Sbjct: 370 RKGFDYLKEPDIVLWTSC------------------RMQMERIMPHELTMASVLRACSSL 411
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
+++G+ ++ YG S ++ + L + + G L + ++ P +D +
Sbjct: 412 AALEQGKQ-IHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMP-SRDIMTWNA 469
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGA----RKMLK 533
++S + + L ++L H TT YV N+ ++ G V R ML
Sbjct: 470 MISGLSQNGEGLKALELFEELRH--GTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLD 527
Query: 534 DSGL 537
+ G+
Sbjct: 528 EFGI 531
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 199/406 (49%), Gaps = 10/406 (2%)
Query: 93 QMHLLPNEY-IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
++LLP ++ F + C + L KG+ IHA L+ G S ++ NSL+++Y K G
Sbjct: 2 NLYLLPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSI 61
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF--EVFKLMLRQGLLPDRFSFAGGLE 209
A LV+ ++VS+N LI G+ + F E+F+ M + LP+ +F+G
Sbjct: 62 VKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFT 121
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
S S + G+ H L +K + FVG++++ +Y K + +A K F I E++ +S
Sbjct: 122 AASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVS 181
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
W T I+ + + +F M + G D F + S+L+A V +GKQIH
Sbjct: 182 WATIISGYAMERMAFEAWELFLLMRREEGAH-DKFIYTSVLSALTVPDLVHYGKQIHCLA 240
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
++ L VGNALV MY KCG + ++K F ++ ++W+ +I +A AL
Sbjct: 241 LKNGLLSIASVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEAL 300
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
LF M G KP TF+G++ AC+ G ++EG+ K G I L
Sbjct: 301 NLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKA-GYECQIYFRKGFDYL 359
Query: 450 LGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLA 495
+ G L++A K F ++P ++ L ++CR++ + ++ L
Sbjct: 360 KAKCGSLVDAR---KGFDYLKEPDIV--LWTSCRMQMERIMPHELT 400
>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 180/570 (31%), Positives = 315/570 (55%), Gaps = 9/570 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S LL C +++ ++ A +LK G P I + +++ KCG + AR+VFD M
Sbjct: 67 NFSQLLRQCIDERSISGIKTIQAHMLKSGF-PAEISGSKLVDASLKCGDIDYARQVFDGM 125
Query: 64 SERNLVSWSAMIS---GHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
SER++V+W+++I+ H ++ E + ++LP+EY +S A + + + Q
Sbjct: 126 SERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQ 185
Query: 121 QIHAYSLKFGY-ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ H ++ G S FVG++L+ MY+K G + +A LV E ++V ALI G+ +
Sbjct: 186 RSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQK 245
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ + + F+ ML + + P+ +++A L C D+ G ++H L VK ES
Sbjct: 246 GEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQ 305
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+++ +Y + +L+ ++ + F+ IE + +SW + I+ E L F++M D +
Sbjct: 306 TSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRD-SI 364
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+P+ FT +S L C+ LA + G+QIH + + ++D G+ L+++Y KCG +
Sbjct: 365 KPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARL 424
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F+ + +V+S NT+I ++A + G AL LFE+M G++P+ VT + +L ACN++ L
Sbjct: 425 VFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRL 484
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V+EG F+S K I +H+ C++DLLGRAG+L EAE T + + D ++ TLL
Sbjct: 485 VEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTLL 542
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
SAC++ R V + ER+ +++ ++P +L+SNLYAS G W V + +KD LKK
Sbjct: 543 SACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKK 602
Query: 540 EPSYSMIEVQGTFEKFTVAE-FSHSKIGEI 568
P+ S +E+ F + FSH +I
Sbjct: 603 NPAMSWVEINKETHTFMAGDLFSHPNSEQI 632
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 171/483 (35%), Positives = 285/483 (59%), Gaps = 12/483 (2%)
Query: 96 LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL 155
L + ++ I C +++ +G I + G+ + F+ N LI+MY+K +DA
Sbjct: 9 LWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDAH 68
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN 215
++ + + N++S+ +I+ + + + +K E+ LMLR G+ P+ ++++ L C+ +
Sbjct: 69 QLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGMS 128
Query: 216 DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK---DLISWNT 272
D+R +LHC +K LES+ +V + ++ +++K +GE E A + +E D I WN+
Sbjct: 129 DVR---MLHCGIIKEGLESDVYVRSALIDVFAK---LGEPEDALSVFDEMVTGDAIVWNS 182
Query: 273 FIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
I + + + L +FK M G + T S+L AC GLA ++ G Q H H+++
Sbjct: 183 IIGGFAQNSRSDVALELFKRMKR-AGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK- 240
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
+QD+ + NALV+MY KCG + + ++FN+M R+V++W+T+I+ A + ALKLF
Sbjct: 241 -YDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLF 299
Query: 393 EQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
E MK++G KP+ +T +G+L AC+HAGL+++G YF SM+K YGI+P EH+ C+IDLLG+
Sbjct: 300 ELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGK 359
Query: 453 AGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLL 512
AGKL +A + + D + TLL ACR++R++V+ E AK++ L P Y +L
Sbjct: 360 AGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTVL 419
Query: 513 SNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYML 572
SN+YA+ W V RK ++D G+KKEP S IEV F + + SH +I E+N L
Sbjct: 420 SNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFIIGDESHPQIVEVNKKL 479
Query: 573 KTL 575
L
Sbjct: 480 NQL 482
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 194/380 (51%), Gaps = 11/380 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S L+ C +A+ +G + + G QP + + N ++N+Y K + A ++FD+M
Sbjct: 15 TYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDAHQLFDQM 74
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+RN++SW+ MIS + + H ALE M + PN Y ++S + AC G+ + +
Sbjct: 75 PQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGMSDV---R 131
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H +K G S +V ++LI ++ K+G DAL V+ E + + +N++I GF +N
Sbjct: 132 MLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNS 191
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ + E+FK M R G + ++ + L C+ L GM H V K + + + N
Sbjct: 192 RSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV--KYDQDLILNN 249
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y K + +A + F ++E+D+I+W+T I+ + ++ L +F E+ G +
Sbjct: 250 ALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLF-ELMKSSGTK 308
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCSYK 359
P+ T +L AC+ ++ G + ++ +N ++++ K G + + K
Sbjct: 309 PNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVK 368
Query: 360 LFNEM-LHRNVVSWNTIIAA 378
L NEM + V+W T++ A
Sbjct: 369 LLNEMECEPDAVTWRTLLGA 388
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
HG+ D T++ ++ C +V G I HL + + N L+NMY K L++
Sbjct: 7 HGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLND 66
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN- 415
+++LF++M RNV+SW T+I+A++ ++ AL+L M G++P+ T+ +L ACN
Sbjct: 67 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNG 126
Query: 416 -------HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
H G++KE G+ D+ + LID+ + G+ +A +
Sbjct: 127 MSDVRMLHCGIIKE------------GLESDVYVRSALIDVFAKLGEPEDALSVFDEMVT 174
Query: 469 GQDPIVLGTLLS--ACRLRRDVVI 490
G D IV +++ A R DV +
Sbjct: 175 G-DAIVWNSIIGGFAQNSRSDVAL 197
>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 923
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 191/574 (33%), Positives = 313/574 (54%), Gaps = 6/574 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++ SL+ C+ + + G +H+ L+ G+ + V N ++N+Y+ GK+ A +F
Sbjct: 247 ATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFW 306
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
MS R+L+SW+ MIS + Q G ++ AL+ Q+ + P+ F+SA+ AC+ +L+
Sbjct: 307 NMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMD 366
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ +HA +L+ VGNSLI+MY K DA ++ ++VS N LI +
Sbjct: 367 GRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAV 426
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRK-GMILHCLTVKCKLESNPF 237
+ K +VF M R + + + L + SNDLR G+ LH T+ S+ +
Sbjct: 427 LEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDY 486
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N+++ +Y+K + + F+ I + ++SWN IAA E+ L +F +M +D
Sbjct: 487 VSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHD- 545
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G D A +++ A LAS++ G Q+H ++ L D V NA ++MY KCG +
Sbjct: 546 GNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEM 605
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
K+ + R WNT+I+ +A + A + F+ M + G PD VTF+ LL+AC+HA
Sbjct: 606 LKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVTLLSACSHA 665
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV +G Y+NSM +G+SP I+H C++D+LGR G+ EAE++ + P+ + ++ +
Sbjct: 666 GLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAEAEKFIEDMPVLPNDLIWRS 725
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LLS+ R +++ IG + AK+L L P S YVLLSNLYA+ W DV R +K L
Sbjct: 726 LLSSSRTHKNLDIGRKAAKRLLELDPFDDSAYVLLSNLYATSARWSDVDRVRSHMKTINL 785
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYM 571
K P+ S ++ + F + + SH +I YM
Sbjct: 786 NKIPACSWLKQKKEVSTFGIGDHSHKHADKI-YM 818
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 135/478 (28%), Positives = 236/478 (49%), Gaps = 13/478 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + ++++ C + G+ + + V+ G+Q V V+N ++++ G++ A K+F
Sbjct: 145 ANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFY 204
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLV 117
M ER+ VSW+A++S + G + FS M L + S IS CA +
Sbjct: 205 RMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVS 264
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G +H+ L+ G S V N+L++MY G +DA ++ +L+S+N +I+ +V
Sbjct: 265 YGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYV 324
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+N + +L PDR +F+ L CS L G ++H +T++ L N
Sbjct: 325 QNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLL 384
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
VGN+++ +Y K N I +AE+ F+L+ D++S N I + + D K + VF M
Sbjct: 385 VGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGE 444
Query: 298 GVRPDDFTFASILAACAGLASVQ-HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
V+ + T +IL + ++ +G +HA+ I D V N+L+ MYAKCG +
Sbjct: 445 -VKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLES 503
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
S +F +++R+VVSWN +IAA+ H G +LKLF M+ G D + +++
Sbjct: 504 SNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDHICLAECMSSSAS 563
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
++EG + + G+ D +D+ G+ GK+ +E K P DP +
Sbjct: 564 LASLEEG-MQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKM---DEMLKMLP---DPAI 614
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 218/414 (52%), Gaps = 8/414 (1%)
Query: 4 SISSLLHHCSKTKALQQ-GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+++SL+ C + + + G ++HA K G+ +V + +L+LY ++ A+++F E
Sbjct: 45 ALASLVTACERWEEGRACGAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWE 104
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
M ERN+VSW+A++ G AL ++ +M + N FA+ +S C ++ V G
Sbjct: 105 MPERNVVSWTALMVALSSNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAG 164
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
Q+ ++ + G V NSLISM +G DA ++ E + VS+NAL++ +
Sbjct: 165 LQVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHE 224
Query: 180 QQPEKGFEVFKLMLRQGLLP-DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
K F VF M R GLL D + + +C+ S+ + G +H L ++ L S V
Sbjct: 225 GLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPV 284
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE-MSNDH 297
N ++ +YS + +AE F + +DLISWNT I++ + L + + +
Sbjct: 285 VNALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNE 344
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G PD TF+S L AC+ ++ G+ +HA +++ L+ ++ VGN+L+ MY KC I +
Sbjct: 345 G--PDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDA 402
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
++F M + +VVS N +I ++A G A+++F M+ +K + +T + +L
Sbjct: 403 ERIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNIL 456
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 192/406 (47%), Gaps = 5/406 (1%)
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHL--LP-NEYIFASAISACAGIQS-LVKGQQ 121
R SW ISG + G A M +P + + AS ++AC + G
Sbjct: 6 RTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACGAA 65
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
IHA + K G ++G +L+ +Y + DA ++ E E N+VS+ AL+ N
Sbjct: 66 IHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGH 125
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
E+ ++ M R+ + + +FA + +C D G+ + + L+ V N+
Sbjct: 126 LEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANS 185
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++++ + +AEK F +EE+D +SWN ++ SH K VF +M +R
Sbjct: 186 LISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRH 245
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D T S+++ CA V +G +H+ +R L+ + V NALVNMY+ G ++ + LF
Sbjct: 246 DATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLF 305
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
M R+++SWNT+I+++ + ALK Q+ T PD +TF L AC+ G +
Sbjct: 306 WNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALM 365
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+G ++M + ++ LI + G+ + +AE + P
Sbjct: 366 DGRM-VHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMP 410
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 212/702 (30%), Positives = 328/702 (46%), Gaps = 129/702 (18%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQP-------------------------- 35
A++ SLL S + QG LHA ++K G
Sbjct: 21 AQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVK 80
Query: 36 -----DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE------- 83
D++VSN +++ Y + G ++ AR +FDEM ERN VSWSA+ISG + G
Sbjct: 81 EFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWY 140
Query: 84 ------------------------HLLALEFFSQM---HLLPNEYIFASAISACAGIQSL 116
+ AL+ F ++ + PN+ F S + AC +
Sbjct: 141 FERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDF 200
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISM-------------------------------Y 145
G I +K G+ V NSLI++ Y
Sbjct: 201 GLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAY 260
Query: 146 MKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA 205
++ G +A ++ E E N +S++A+IA + ++ E+ ++F M+++G P+ FA
Sbjct: 261 VETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFA 320
Query: 206 GGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK 265
L + L G+ +H K ++ + F+G++++ LY K + F LI EK
Sbjct: 321 CTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEK 380
Query: 266 DLISWN-------------------------------TFIAACSHCADYEKGLSVFKEMS 294
+++ WN T IA EK L VF +
Sbjct: 381 NVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLL 440
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
G P+ TF+S+L ACA +AS+ G +H +I++ + D+ VG AL +MYAKCG I
Sbjct: 441 VS-GQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDI 499
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG-IKPDSVTFIGLLTA 413
S ++F M +N +SW +I A +L LFE+M+ T + P+ + + +L A
Sbjct: 500 GSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFA 559
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C+H GLV +G YFNSMEK YGI P +H+TC++DLL R+G+L EAEE+ + P +
Sbjct: 560 CSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEAN 619
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
LLS C+ +D I ER AK+L+ L ++ YVLLSN+YAS G W DV+ RK+++
Sbjct: 620 AWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMR 679
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ GLKK S +EV+ F + SHS+ EI L+ L
Sbjct: 680 EKGLKKSGGCSWVEVRNQVHSFYSEDGSHSQSNEIYGTLQLL 721
>gi|302765581|ref|XP_002966211.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
gi|300165631|gb|EFJ32238.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
Length = 969
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 175/521 (33%), Positives = 293/521 (56%), Gaps = 13/521 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++S +L C L+ G +HA V++ G++ D +V ++N+YAKCG + ARKVFD +
Sbjct: 420 ALSMVLEACGSLAELKGGKLVHAHVIESGLEGD-LVGISLVNMYAKCGTVGEARKVFDRI 478
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+ R+ + W++MI+ + + H AL F +M + P+ F + ++AC L G+
Sbjct: 479 NNRSRILWNSMITAYQEKDPHE-ALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGR 537
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IH + G+A+ V +L +MY K G +A V+ ++VS+N +IA +V+ +
Sbjct: 538 TIHTRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVSWNNMIAAYVQGR 597
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E + M +G+ PD+ +F L CS N L G +H + +LE++ +
Sbjct: 598 DGEGAISLCWAMQLEGMRPDKATFTSLLNACSDPNRLVDGRQIHSWIAESRLENDIVMVT 657
Query: 241 TIMALYSKFNLIGEAEKAFRLI------EEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
++ +Y+ + A + F I +DL W + I A +Y K L ++++M
Sbjct: 658 GLITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLWTSMITAYEQHGEYRKALELYEQM- 716
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
+ V D TF S+L ACA L+ ++ G+ IHA ++R L DV V N++V MY KCG
Sbjct: 717 HSRQVEADRVTFISVLNACAHLSDLRQGQAIHARVMRRGLATDVAVANSIVFMYGKCGSF 776
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ +F + H+++ W +IA++A H G AL +F +++ GI+ ++TF+ +L+AC
Sbjct: 777 DEASIVFEKTKHKDISLWTALIASYARHGHGEQALWIFRRLRQDGIELSNLTFVAMLSAC 836
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
+H GL++EG +F SM + GI P++EH +CL+DLL RAG L AEE+ + P+ + IV
Sbjct: 837 SHVGLIEEGCEFFASMAE-LGIEPNMEHHSCLVDLLARAGHLHTAEEFLSRMPVAANTIV 895
Query: 475 LGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNL 515
L LL+ACR+ DV R+A++L L P + +PYV LSN+
Sbjct: 896 LTALLAACRVHGDVERARRVAEKLEALDPESEAPYVTLSNI 936
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 145/464 (31%), Positives = 250/464 (53%), Gaps = 17/464 (3%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILAR-KVFDEMSE 65
S+L C L+QG +HA V++ ++ V+V+N +L +Y++C +R + F M
Sbjct: 116 SILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKR 175
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQI 122
R++VSW+ MI + Q G+ L+++ F +M L PN F S +S C L +G+QI
Sbjct: 176 RDVVSWTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQI 235
Query: 123 HAYSLKFGYASISFVG--NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
HA ++ S +G N I+MY+K G A+ + ++VS+ +I + ++
Sbjct: 236 HALVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDG 295
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ ++F+ ML +G P+ +F L C + L +G +H L V+ LES+ V N
Sbjct: 296 KFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVAN 355
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC----SHCADYEKGLSVFKEMSND 296
+++ +YS+ ++ F + +D +SW+T I AC SHC D L +++ M ++
Sbjct: 356 SLLGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRD---ALPLYRSMLHE 412
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
GV P + +L AC LA ++ GK +HAH+I L D+ VG +LVNMYAKCG +
Sbjct: 413 -GVMPKTLALSMVLEACGSLAELKGGKLVHAHVIESGLEGDL-VGISLVNMYAKCGTVGE 470
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ K+F+ + +R+ + WN++I A+ + AL LF +M+ G+ PD +TF+ +L AC +
Sbjct: 471 ARKVFDRINNRSRILWNSMITAY-QEKDPHEALHLFREMQPEGVSPDRITFMTVLNACVN 529
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
A ++ G + + G + D+ T L ++ + G L EA
Sbjct: 530 AADLENGRTIHTRIVDS-GFAADVRVATALFNMYAKCGSLGEAR 572
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/515 (28%), Positives = 255/515 (49%), Gaps = 23/515 (4%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
I +LL C+K AL++G + + ++ D+ V N +N+Y KCG + A + F M
Sbjct: 13 IKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGCLDGAVQTFARMK 72
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQ 121
R++VSW+ MI + Q G+ L+L+ F +M L PN F S +S C L +G+Q
Sbjct: 73 RRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQ 132
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALL-VYGEAFEPNLVSFNALIAGFVENQ 180
IHA ++ S V NSL+ MY + D+ + + ++VS+ +I + ++
Sbjct: 133 IHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVMIGAYSQDG 192
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG- 239
+ ++F+ ML +G P+ +F L C + L +G +H L V+ LES+ +G
Sbjct: 193 KFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHLDIGV 252
Query: 240 -NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N + +Y K + A + F ++ +D++SW I A S + L +F+EM + G
Sbjct: 253 LNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLE-G 311
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
P+ TF SIL+ C + ++ G+QIHA ++ L V V N+L+ MY++C S
Sbjct: 312 TAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSR 371
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRL-GGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
LF+ M R+ VSW+TII A + AL L+ M G+ P ++ +L AC
Sbjct: 372 SLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEACGSL 431
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
+K G+ + ++ G+ D+ + L+++ + G + EA + + + I+ +
Sbjct: 432 AELKGGKLVHAHVIES-GLEGDLVGIS-LVNMYAKCGTVGEARKVFDRIN-NRSRILWNS 488
Query: 478 LLSACRLRRDVVIGERLAKQLFHL----QPTTTSP 508
+++A + E+ + HL QP SP
Sbjct: 489 MITAYQ--------EKDPHEALHLFREMQPEGVSP 515
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 120/234 (51%), Gaps = 2/234 (0%)
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
M R+G+ PDR L C+ L +G ++ +LE + V N + +Y K
Sbjct: 1 MDRRGIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGC 60
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ A + F ++ +D++SW I A S + L +F+EM + G P+ TF SIL+
Sbjct: 61 LDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLE-GTAPNSVTFVSILS 119
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC-GLISCSYKLFNEMLHRNVV 370
C + ++ G+QIHA ++ L V V N+L+ MY++C + F M R+VV
Sbjct: 120 GCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVV 179
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
SW +I A++ +++LF +M G P+SVTF+ +L+ C L+++G
Sbjct: 180 SWTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGR 233
>gi|302793382|ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
gi|300153805|gb|EFJ20442.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
Length = 899
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 189/559 (33%), Positives = 298/559 (53%), Gaps = 16/559 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S++ CS L +G S H +++ G + V N ++N+Y KCG + AR VF++MS R
Sbjct: 233 SVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSR 292
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYS 126
N+VSW+ MI + Q G A + + +M PN F + + +C + L + +QIHA+
Sbjct: 293 NVVSWTVMIWAYAQQGFIRAAFDLYKRMDCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHM 352
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEP--NLVSFNALIAGFVENQQPEK 184
+ G+ S + + L++MY K G A ++ E N V++NA+I+G ++ + ++
Sbjct: 353 VASGFDSDAVLQVCLVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAMISGLAQHGESKQ 412
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL-ESNPFVGNTIM 243
E F M +G+ P+ ++ LE CS NDL +G LH + + E+N + N ++
Sbjct: 413 ALECFWKMELEGVRPNSVTYLASLEACSSLNDLTRGRQLHARILLENIHEAN--LSNAVI 470
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y K + EA F + E+D++SWNT IA + + L FK+M + G D
Sbjct: 471 NMYGKCGSLDEAMDEFAKMPERDVVSWNTMIATYAQHGSGRQALEFFKQMDLE-GWTTDR 529
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMR--LNQDVGVGNALVNMYAKCGLISCSYKLF 361
T+ + AC + S+ GK IH+ + L QD GV ALV MYA+CG + + +F
Sbjct: 530 ATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVF 589
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
RN+V+W+ +IAA A H AL LF +M+ G KPD++TF L+ AC+ G+VK
Sbjct: 590 WRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTFSTLVAACSRRGVVK 649
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+G YF SM + Y I +HF ++DLLGRAG L EAE+ +K P + LL A
Sbjct: 650 DGVFYFVSMVEDYSIPASEDHFGGMVDLLGRAGWLEEAEQVMRKNPCA---LAHAVLLGA 706
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPY----VLLSNLYASDGMWGDVAGARKMLKDSGL 537
C + DV G R+A+ L ++ + +L+ LY + G W D A RK ++
Sbjct: 707 CHVHGDVERGIRIAQSALELDWKNSASFAASMAMLAELYGAAGRWEDAARVRKAVESRNA 766
Query: 538 KKEP-SYSMIEVQGTFEKF 555
++EP S IEV+ +F
Sbjct: 767 RREPGGRSWIEVKNRVHEF 785
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 144/490 (29%), Positives = 255/490 (52%), Gaps = 26/490 (5%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S++L CS AL +G ++H + G++ V V N ++NLY KCG++ A+ VF+ + E
Sbjct: 131 STVLTACSSAGALNEGKAIHDCAVLAGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLPE 189
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHL----LPNEYIFASAISACAGIQSLVKGQQ 121
RNLVSW+A+I+ + Q G A++ F M L PN+ F S + AC+ + L +G+
Sbjct: 190 RNLVSWNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKS 249
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
H ++ G+ S FVGNSL++MY K G A LV+ + N+VS+ +I + +
Sbjct: 250 THERIIRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGF 309
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
F+++K R P+ +F ++ C DL + +H V +S+ +
Sbjct: 310 IRAAFDLYK---RMDCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVC 366
Query: 242 IMALYSKFNLIGEAEKAFRLIEEK--DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ +Y K + A F ++E+ + ++WN I+ + + ++ L F +M + GV
Sbjct: 367 LVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELE-GV 425
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
RP+ T+ + L AC+ L + G+Q+HA ++ +++ + NA++NMY KCG + +
Sbjct: 426 RPNSVTYLASLEACSSLNDLTRGRQLHARILLENIHE-ANLSNAVINMYGKCGSLDEAMD 484
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
F +M R+VVSWNT+IA +A H G AL+ F+QM G D T++G + AC
Sbjct: 485 EFAKMPERDVVSWNTMIATYAQHGSGRQALEFFKQMDLEGWTTDRATYLGAIDACGSVPS 544
Query: 420 VKEGEAYFN-------SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDP 472
+ G+ + +E+ G++ T L+ + R G L +A+ + ++
Sbjct: 545 LALGKTIHSIVATAAPCLEQDPGVA------TALVTMYARCGSLHDAKSVFWR-SHSRNL 597
Query: 473 IVLGTLLSAC 482
+ L++AC
Sbjct: 598 VTWSNLIAAC 607
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 135/483 (27%), Positives = 246/483 (50%), Gaps = 18/483 (3%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+SLL C++ K+ G +H +L G + + NH++ +YAKCG + A +VF+ +
Sbjct: 30 ASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGCLEDALEVFELLPN 89
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQI 122
N+ SW+A+I+ + + G L F +M L P+ ++F++ ++AC+ +L +G+ I
Sbjct: 90 PNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKAI 149
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H ++ G + VGN+++++Y K G +A V+ E NLVS+NALIA +N
Sbjct: 150 HDCAVLAGMET-QVVGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHC 208
Query: 183 EKGFEVFKLM-LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ +VF LM L + P+ +F ++ CS DL +G H ++ +S FVGN+
Sbjct: 209 KDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNS 268
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y K + A F + ++++SW I A + ++K M P
Sbjct: 269 LVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMD----CEP 324
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
+ TF +++ +C + +QIHAH++ + D + LV MY KCG + ++ +F
Sbjct: 325 NAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVDSAWSIF 384
Query: 362 NEMLHR--NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+ R N V+WN +I+ A H AL+ F +M+ G++P+SVT++ L AC+
Sbjct: 385 ENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVTYLASLEACSSLND 444
Query: 420 VKEGEAYFNS--MEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
+ G +E + + +I++ G+ G L EA + K P +D + T
Sbjct: 445 LTRGRQLHARILLENIH----EANLSNAVINMYGKCGSLDEAMDEFAKMP-ERDVVSWNT 499
Query: 478 LLS 480
+++
Sbjct: 500 MIA 502
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/371 (33%), Positives = 185/371 (49%), Gaps = 13/371 (3%)
Query: 92 SQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
S L P Y AS + C +S G+ +H + L G ++ N LI MY K G
Sbjct: 20 SSESLQPARY--ASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGCL 77
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
DAL V+ PN+ S+ ALI + + + +F+ M G PD F F+ L C
Sbjct: 78 EDALEVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTAC 137
Query: 212 SVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
S + L +G +H V +E+ VGN I+ LY K + EA+ F + E++L+SWN
Sbjct: 138 SSAGALNEGKAIHDCAVLAGMETQ-VVGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWN 196
Query: 272 TFIAACS---HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
IAA + HC D + VF M D VRP+D TF S++ AC+ L + GK H
Sbjct: 197 ALIAANAQNGHCKD---AMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHER 253
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
+IR + + VGN+LVNMY KCG + + +F +M RNVVSW +I A+A +A
Sbjct: 254 IIRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAA 313
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID 448
L+++M +P++VTF+ ++ +C + E M + G D CL+
Sbjct: 314 FDLYKRMDC---EPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVAS-GFDSDAVLQVCLVT 369
Query: 449 LLGRAGKLLEA 459
+ G+ G + A
Sbjct: 370 MYGKCGSVDSA 380
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 177/330 (53%), Gaps = 13/330 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +++ C + + L + +HA ++ G D ++ ++ +Y KCG + A +F+
Sbjct: 326 AVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVDSAWSIFE 385
Query: 62 EMSER--NLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSL 116
+ ER N V+W+AMISG Q GE ALE F +M L PN + +++ AC+ + L
Sbjct: 386 NLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVTYLASLEACSSLNDL 445
Query: 117 VKGQQIHAYSL--KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIA 174
+G+Q+HA L A++S N++I+MY K G +A+ + + E ++VS+N +IA
Sbjct: 446 TRGRQLHARILLENIHEANLS---NAVINMYGKCGSLDEAMDEFAKMPERDVVSWNTMIA 502
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCL--TVKCKL 232
+ ++ + E FK M +G DR ++ G ++ C L G +H + T L
Sbjct: 503 TYAQHGSGRQALEFFKQMDLEGWTTDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCL 562
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
E +P V ++ +Y++ + +A+ F ++L++W+ IAAC+ + L +F+E
Sbjct: 563 EQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFRE 622
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHG 322
M G +PD TF++++AAC+ V+ G
Sbjct: 623 MQL-QGTKPDALTFSTLVAACSRRGVVKDG 651
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 198/603 (32%), Positives = 313/603 (51%), Gaps = 43/603 (7%)
Query: 4 SISSLLHHCSK-TKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++ S+ H CS L G +HA VL+ G +N ++ +YAK G++ A+ +FD
Sbjct: 188 TLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDV 246
Query: 63 MSERNLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKG 119
+++LVSW+ +IS Q E LL L Q + PN AS + AC+ ++ L G
Sbjct: 247 FDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCG 306
Query: 120 QQIHAYSL-KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
++IHA+ L SFVG +L+ MY LV+ F + +NA+IAG+V
Sbjct: 307 KEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVR 366
Query: 179 NQQPEKGFEVF-KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
N+ + E+F +++ GL P+ + + L C +H VK E + +
Sbjct: 367 NEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKY 426
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM---- 293
V N +M +YS+ I A F + KD++SWNT I C ++ L++ +M
Sbjct: 427 VQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQ 486
Query: 294 -------------SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV 340
+ + ++P+ T ++L CA LA++ GK+IHA+ ++ L++DV V
Sbjct: 487 AEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAV 546
Query: 341 GNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG- 399
G+ALV+MYAKCG ++ S +F +M RNV++WN +I A+ H G ALKLF +M G
Sbjct: 547 GSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGD 606
Query: 400 ----IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGK 455
I+P+ VT+I + + +H+G+V EG F +M+ +GI P +H+ CL+DLLGR+G+
Sbjct: 607 NNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQ 666
Query: 456 LLEAEEYTKKFPLGQDPI-VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSN 514
+ EA K P + +LL AC++ +++ IGE AK LF L P +
Sbjct: 667 IEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDPNVL-------D 719
Query: 515 LYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKT 574
M G RKM K+ G++KEP S IE KF + SH + E++ L+T
Sbjct: 720 YGTKQSMLG-----RKM-KEKGVRKEPGCSWIEHGDEVHKFLAGDVSHPQSKEVHEYLET 773
Query: 575 LSL 577
LSL
Sbjct: 774 LSL 776
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 138/480 (28%), Positives = 236/480 (49%), Gaps = 33/480 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++L + + L G LHA V K G V N ++N+Y KCG + AR+VFDE+
Sbjct: 87 AFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEI 146
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAG-IQSLVKG 119
+ R+ VSW++MI+ + E LA+ F M L P + S AC+ I L+ G
Sbjct: 147 TNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLG 206
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+HA+ L+ G +F N+L++MY K+G +A ++ + +LVS+N +I+ +N
Sbjct: 207 KQVHAFVLRNGDWR-TFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQN 265
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV-KCKLESNPFV 238
+ E+ +ML+ G+ P+ + A L CS L G +H + L N FV
Sbjct: 266 DRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFV 325
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA-CSHCADYEKGLSVFKEMSNDH 297
G ++ +Y + F + + + WN IA + DYE + +F EM +
Sbjct: 326 GCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYE-AIELFVEMVFEL 384
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G+ P+ T +S+L AC S + IH+ +++ +D V NAL++MY++ G I +
Sbjct: 385 GLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIA 444
Query: 358 YKLFNEMLHRNVVSWNTIIAAH--------------------ANHRLGGSALKLFEQMKA 397
+F M +++VSWNT+I + A HR+ + +E K
Sbjct: 445 RSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRI--NTFDDYEDNKN 502
Query: 398 TGIKPDSVTFIGLLTACNH-AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+KP+SVT + +L C A L K E + ++++ +S D+ + L+D+ + G L
Sbjct: 503 FPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQM--LSKDVAVGSALVDMYAKCGCL 560
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 119/364 (32%), Positives = 188/364 (51%), Gaps = 10/364 (2%)
Query: 98 PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV 157
P+ + F + + A AGIQ L G+Q+HA+ KFG A + V NSL++MY K G A V
Sbjct: 83 PDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRV 142
Query: 158 YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS-VSND 216
+ E + VS+N++I ++ E +F+LML + + P F+ CS + N
Sbjct: 143 FDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLING 202
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
L G +H ++ + F N ++ +Y+K + EA+ F + ++KDL+SWNT I++
Sbjct: 203 LLLGKQVHAFVLR-NGDWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISS 261
Query: 277 CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH-LIRMRLN 335
S +E+ L M GVRP+ T AS+L AC+ L + GK+IHA L+ L
Sbjct: 262 LSQNDRFEEALLYLHVMLQS-GVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLI 320
Query: 336 QDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM 395
++ VG ALV+MY C +F+ M R + WN +IA + + A++LF +M
Sbjct: 321 ENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEM 380
Query: 396 K-ATGIKPDSVTFIGLLTAC--NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
G+ P+SVT +L AC + L KEG +S +G D L+D+ R
Sbjct: 381 VFELGLSPNSVTLSSVLPACVRCESFLDKEG---IHSCVVKWGFEKDKYVQNALMDMYSR 437
Query: 453 AGKL 456
G++
Sbjct: 438 MGRI 441
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 120/236 (50%), Gaps = 7/236 (2%)
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ + M+ G+ PD F+F L+ + DL G LH K V N+++
Sbjct: 68 QAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLV 127
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y K I A + F I +D +SWN+ I A ++E + +F+ M ++ V P
Sbjct: 128 NMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLEN-VGPTS 186
Query: 304 FTFASILAACAGLAS-VQHGKQIHAHLIRMRLNQD--VGVGNALVNMYAKCGLISCSYKL 360
FT S+ AC+ L + + GKQ+HA ++R N D NALV MYAK G + + L
Sbjct: 187 FTLVSVAHACSNLINGLLLGKQVHAFVLR---NGDWRTFTNNALVTMYAKLGRVYEAKTL 243
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
F+ +++VSWNTII++ + + AL M +G++P+ VT +L AC+H
Sbjct: 244 FDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSH 299
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 75/134 (55%), Gaps = 1/134 (0%)
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
+ + +S + M GV PD+F F ++L A AG+ + GKQ+HAH+ + V N
Sbjct: 66 FHQAISTYTNMVT-AGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPN 124
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
+LVNMY KCG I + ++F+E+ +R+ VSWN++I A A+ LF M + P
Sbjct: 125 SLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGP 184
Query: 403 DSVTFIGLLTACNH 416
S T + + AC++
Sbjct: 185 TSFTLVSVAHACSN 198
>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
Length = 834
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 185/571 (32%), Positives = 297/571 (52%), Gaps = 27/571 (4%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C L LHA +K D +V ++++YAK ++ AR+ F +
Sbjct: 251 LLCRCKAITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHT 310
Query: 68 LVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHA 124
+ + +AM+ G + G E + +F ++ + + SACA ++
Sbjct: 311 VETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVK---------- 360
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
G+ V N+++ +Y K +A LV+ E + + VS+N +IA +N+ E
Sbjct: 361 -----GFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYED 415
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
MLR G+ D F++ L+ C+ L G+++H +K L + FV +T++
Sbjct: 416 TIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVD 475
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y K +I EA K I ++L+SWN+ IA S E+ F EM D GV+PD F
Sbjct: 476 MYCKCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEML-DMGVKPDHF 534
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T+A++L +CA LA+++ GKQIH +I+ + D + + LV+MYAKCG + S +F ++
Sbjct: 535 TYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKV 594
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+ VSWN +I +A H G AL++FE+ + + P+ TF+ +L AC+H GL+ +G
Sbjct: 595 QKLDFVSWNAMICGYALHGQGFEALEMFERTQKANVAPNHATFVAVLRACSHVGLLDDGC 654
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRL 484
YF+ M Y + P +EHF C+ EA ++ + PL D ++ TLLS C++
Sbjct: 655 RYFHLMTSRYKLEPQLEHFACM--------GPQEALKFIRSMPLEADAVIWKTLLSICKI 706
Query: 485 RRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYS 544
R+DV + E A + L P +S Y+LLSN+YA G W DV+ R++++ LKKEP S
Sbjct: 707 RQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCS 766
Query: 545 MIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
IEVQ F V E H + E+ ML L
Sbjct: 767 WIEVQSEMHGFLVGEKVHPRSREVYEMLNNL 797
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 132/457 (28%), Positives = 227/457 (49%), Gaps = 33/457 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++ LL C L G+ +HA +K G++ DV + ++++Y KC + A F M
Sbjct: 165 TLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGKCRSLEDALHFFHGM 224
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
ERN VSW A+I+G Q +++ LE + C I L +Q+H
Sbjct: 225 GERNSVSWGAVIAGCVQNEQYMRGLELLCR----------------CKAITCLSTARQLH 268
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A+++K ++S VG +++ +Y K DA + + + NA++ G V
Sbjct: 269 AHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGA 328
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ ++F+ M R G+ G + S+S G+ C VK + + V N I+
Sbjct: 329 EAMQLFQFMTRSGI---------GFGVVSLS-----GVFSACAEVK-GFDVDVCVRNAIL 373
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
LY K + EA F+ +E++D +SWNT IAA YE + EM G+ DD
Sbjct: 374 DLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIVHLNEMLRS-GMEADD 432
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
FT+ S+L ACAGL S+++G +H I+ L D V + +V+MY KCG+I+ + KL +
Sbjct: 433 FTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDR 492
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
+ + +VSWN+IIA + ++ A K F +M G+KPD T+ +L +C + ++ G
Sbjct: 493 IGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCANLATIELG 552
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
+ + K + + T L+D+ + G + +++
Sbjct: 553 KQIHGQIIKQEMLGDEFISST-LVDMYAKCGNMPDSQ 588
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/482 (26%), Positives = 206/482 (42%), Gaps = 80/482 (16%)
Query: 17 ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMIS 76
AL G + HA +L G P + VSN +L +YA+CG A VFD M R+ VSW+ M++
Sbjct: 46 ALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFDTMPHRDTVSWNTMLT 105
Query: 77 GHHQAGEHLLALEFFSQMH----------------------------------LLPNEYI 102
+ G+ +A M + P+
Sbjct: 106 AYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGLSIEMARCGVAPDRTT 165
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
A + AC G+ L G QIHA ++K G G++L+ MY K DAL +
Sbjct: 166 LAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGKCRSLEDALHFFHGMG 225
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
E N VS+ A+IAG V+N+Q +G E L+ R C L
Sbjct: 226 ERNSVSWGAVIAGCVQNEQYMRGLE---LLCR----------------CKAITCLSTARQ 266
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
LH +K K S+ VG I+ +Y+K + + +A +AF + + + N +
Sbjct: 267 LHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGL 326
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
+ + +F+ M+ G+ + + + +ACA + + DV V N
Sbjct: 327 GAEAMQLFQFMTRS-GIGFGVVSLSGVFSACAEVKG---------------FDVDVCVRN 370
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
A++++Y KC + +Y +F EM R+ VSWNTIIAA + + +M +G++
Sbjct: 371 AILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIVHLNEMLRSGMEA 430
Query: 403 DSVTFIGLLTACN-----HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLL 457
D T+ +L AC GLV G+A + G+ D + ++D+ + G +
Sbjct: 431 DDFTYGSVLKACAGLQSLEYGLVVHGKAIKS------GLGLDAFVSSTVVDMYCKCGMIT 484
Query: 458 EA 459
EA
Sbjct: 485 EA 486
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 151/305 (49%), Gaps = 22/305 (7%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C+ ++L+ G+ +H +K G+ D VS+ V+++Y KCG + A K+ D + +
Sbjct: 437 SVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIGGQ 496
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQ---MHLLPNEYIFASAISACAGIQSLVKGQQIH 123
LVSW+++I+G + A +FFS+ M + P+ + +A+ + +CA + ++ G+QIH
Sbjct: 497 ELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCANLATIELGKQIH 556
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+K F+ ++L+ MY K G D+ L++ + + + VS+NA+I G+ + Q
Sbjct: 557 GQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQKLDFVSWNAMICGYALHGQGF 616
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKG-MILHCLTVKCKLESNPFVGNTI 242
+ E+F+ + + P+ +F L CS L G H +T + KLE
Sbjct: 617 EALEMFERTQKANVAPNHATFVAVLRACSHVGLLDDGCRYFHLMTSRYKLEPQ------- 669
Query: 243 MALYSKFNLIGEAEKAFRLIE----EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
F +G E A + I E D + W T ++ C D E + SN
Sbjct: 670 ---LEHFACMGPQE-ALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETA---ASNVLR 722
Query: 299 VRPDD 303
+ PDD
Sbjct: 723 LDPDD 727
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 165/384 (42%), Gaps = 67/384 (17%)
Query: 107 ISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY-------- 158
+ A AG +L GQ HA L G+ FV N L+ MY + G ++ A V+
Sbjct: 38 LCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFDTMPHRDT 97
Query: 159 ----------------GEAF-------EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
G A +P++VS+NAL++G+ + + M R
Sbjct: 98 VSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGLSIEMARC 157
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
G+ PDR + A L+ C +DL G+ +H L VK LE + G+ ++ +Y K + +A
Sbjct: 158 GVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGKCRSLEDA 217
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
F + E++ +SW IA C Y +GL +L C
Sbjct: 218 LHFFHGMGERNSVSWGAVIAGCVQNEQYMRGL--------------------ELLCRCKA 257
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
+ + +Q+HAH I+ + + D VG A+V++YAK + + + F + + V + N +
Sbjct: 258 ITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETCNAM 317
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYG 435
+ LG A++LF+ M +GI V+ G+ +AC + G
Sbjct: 318 MVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSAC----------------AEVKG 361
Query: 436 ISPDIEHFTCLIDLLGRAGKLLEA 459
D+ ++DL G+ L+EA
Sbjct: 362 FDVDVCVRNAILDLYGKCKALVEA 385
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 68/119 (57%), Gaps = 3/119 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +++L C+ ++ G +H ++K + D +S+ ++++YAKCG M ++ +F+++
Sbjct: 535 TYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKV 594
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
+ + VSW+AMI G+ G+ ALE F + ++ PN F + + AC+ + L G
Sbjct: 595 QKLDFVSWNAMICGYALHGQGFEALEMFERTQKANVAPNHATFVAVLRACSHVGLLDDG 653
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
F+ L A AG +++ G+ HA ++ + V N L+ MYA+CG + ++ +F+
Sbjct: 32 FSHVYQLCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFDT 91
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M HR+ VSWNT++ A+A+ G A L M PD V++ LL+ G+ ++
Sbjct: 92 MPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMP----DPDVVSWNALLSGYCQRGMFRDL 147
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLG 451
M + G++PD L+ G
Sbjct: 148 VGLSIEMARC-GVAPDRTTLAVLLKACG 174
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 180/594 (30%), Positives = 307/594 (51%), Gaps = 41/594 (6%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYA--KCGKMILARKVFDEMS 64
SL+ CS + L+Q HA +++ G+ D ++ + + A + ARKVFDE+
Sbjct: 36 SLIDRCSSLRQLKQ---THAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIP 92
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFF-----SQMHLLPNEYIFASAISACAGIQSLVKG 119
+ N +W+ +I + + + ++ F S+ PN+Y F I A A + SL G
Sbjct: 93 QPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLG 152
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
Q +H ++K S FV NSLI Y G A V+ E ++VS+N++I GFV+
Sbjct: 153 QSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 212
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
P+K E+FK M + + + G L C+ DL G + + ++ N +
Sbjct: 213 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLA 272
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYE--------------- 284
N ++ +Y+K I +A++ F +EEKD ++W T + + DYE
Sbjct: 273 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIV 332
Query: 285 ----------------KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
+ L VF E+ ++ + T S L+ACA + +++ G+ IH++
Sbjct: 333 AWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSY 392
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
+ + + + V +AL++MY+KCG + + ++FN + R+V W+ +I A H G A
Sbjct: 393 IKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEA 452
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID 448
+ +F +M+ +KP+ VTF + AC+H GLV E E+ F ME +YGI P+ +H+ C++D
Sbjct: 453 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVD 512
Query: 449 LLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSP 508
+LGR+G L +A ++ + P+ V G LL AC++ ++ + E +L L+P
Sbjct: 513 VLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGA 572
Query: 509 YVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
+VLLSN+YA G W +V+ RK ++ +GLKKEP S IE+ G +F + +H
Sbjct: 573 HVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAH 626
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S L C++ AL+ G +H+ + K GI+ + V++ ++++Y+KCG + AR+VF+ +
Sbjct: 369 TLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSV 428
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
+R++ WSAMI G G A++ F +M ++ PN F + AC+
Sbjct: 429 EKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACS 479
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 197/623 (31%), Positives = 321/623 (51%), Gaps = 55/623 (8%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER- 66
+L C + +L+ G S+HA V G+ +V + N ++ +Y +CG + A ++FDE+ ER
Sbjct: 133 VLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERK 192
Query: 67 --NLVSWSAMISGHHQAGEHLLALEFFSQM------HLLPNEYIFASAISACAGIQSLVK 118
++VSW+++++ + Q G+ AL +M L P+ + + ACA + +L
Sbjct: 193 IEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQH 252
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+Q+H +S++ G FVGN+L+SMY K ++A V+ + ++VS+NA++ G+ +
Sbjct: 253 GKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQ 312
Query: 179 --------------------------------NQQPEKGFE---VFKLMLRQGLLPDRFS 203
Q GFE VF+ M GL P+ +
Sbjct: 313 IGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVT 372
Query: 204 FAGGLEICSVSNDLRKGMILHCLTVKCKL-------ESNPFVGNTIMALYSKFNLIGEAE 256
A L C+ L G H +K L E + V N ++ +Y+K A
Sbjct: 373 LASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVAR 432
Query: 257 KAFRLIEEKD--LISWNTFIAACSHCADYEKGLSVFKEM-SNDHGVRPDDFTFASILAAC 313
F IE KD +++W I + + L +F ++ ++P+ FT + L AC
Sbjct: 433 SIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMAC 492
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDV-GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
A L ++ G+Q+HA+ +R +V VGN L++MY+K G I + +F+ M RNVVSW
Sbjct: 493 ARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSW 552
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
+++ + H G AL LF+QM+ G D +TF+ +L AC+H+G+V +G YF+ M K
Sbjct: 553 TSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVK 612
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGE 492
+GI+P EH+ C++DLLGRAG+L EA E K + +V LLSA R+ ++ +GE
Sbjct: 613 GFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGE 672
Query: 493 RLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTF 552
A +L L Y LLSNLYA+ W DVA R ++K +G++K P S I+ + +
Sbjct: 673 YAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKST 732
Query: 553 EKFTVAEFSHSKIGEINYMLKTL 575
F V + SH + +I +L L
Sbjct: 733 TTFFVGDRSHPESEQIYNLLLDL 755
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 132/475 (27%), Positives = 221/475 (46%), Gaps = 62/475 (13%)
Query: 41 NHVLNLYAKCGKMILARKVFDEM--SERNLVSWSAMISGHHQAGEHLLALEFFSQMH--- 95
++ + Y +CG A + + S + W+A+I + G L F+ QM
Sbjct: 63 SYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLG 122
Query: 96 LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL 155
LP+ Y F + AC I SL G +HA G S F+ NS+++MY + G DA
Sbjct: 123 WLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAH 182
Query: 156 LVYGEAFE---PNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG------LLPDRFSFAG 206
++ E E ++VS+N+++A +V+ Q ++ R G L PD +
Sbjct: 183 QMFDEVLERKIEDIVSWNSILAAYVQGGQSRTA---LRIAFRMGNHYSLKLRPDAITLVN 239
Query: 207 GLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKD 266
L C+ L+ G +H +V+ L + FVGN ++++Y+K + + EA K F I++KD
Sbjct: 240 ILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKD 299
Query: 267 LISWNTFIAACSHCADYEKGLSVFKEMSND------------------------------ 296
++SWN + S ++ LS+FK M +
Sbjct: 300 VVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFR 359
Query: 297 ----HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN-------QDVGVGNALV 345
+G+ P+ T AS+L+ CA + ++ +GKQ HA++I+ LN D+ V N L+
Sbjct: 360 QMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLI 419
Query: 346 NMYAKCGLISCSYKLFN--EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM--KATGIK 401
+MYAKC + +F+ E +NVV+W +I +A H ALKLF Q+ + T +K
Sbjct: 420 DMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLK 479
Query: 402 PDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
P++ T L AC G ++ G + S + CLID+ ++G +
Sbjct: 480 PNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDI 534
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 210/453 (46%), Gaps = 60/453 (13%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++ ++L C+ ALQ G +H ++ G+ DV V N ++++YAKC KM A KVF+
Sbjct: 234 AITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFE 293
Query: 62 EMSERNLVSWSAMISGHHQAGEH-----------------------------------LL 86
+ ++++VSW+AM++G+ Q G
Sbjct: 294 GIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFE 353
Query: 87 ALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF------- 136
AL+ F QM L PN AS +S CA + +L+ G+Q HAY +K ++++
Sbjct: 354 ALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIK-NILNLNWNDKEDDL 412
Query: 137 -VGNSLISMYMKVGYSSDALLVYG--EAFEPNLVSFNALIAGFVENQQPEKGFEVFKLML 193
V N LI MY K A ++ E + N+V++ +I G+ ++ + ++F +
Sbjct: 413 LVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIF 472
Query: 194 RQ--GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP-FVGNTIMALYSKFN 250
+Q L P+ F+ + L C+ +LR G LH ++ + ES +VGN ++ +YSK
Sbjct: 473 KQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSG 532
Query: 251 LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
I A F ++ ++++SW + + E+ L +F +M G D TF +L
Sbjct: 533 DIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQK-LGFAVDGITFLVVL 591
Query: 311 AACAGLASVQHGKQIHAHLIRMRLNQDVGVGN--ALVNMYAKCGLISCSYKLFNEM-LHR 367
AC+ V G I+ H + G + +V++ + G ++ + +L M +
Sbjct: 592 YACSHSGMVDQG-MIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEP 650
Query: 368 NVVSWNTIIAA---HANHRLGGSALKLFEQMKA 397
V W +++A HAN LG A ++ A
Sbjct: 651 TAVVWVALLSASRIHANIELGEYAASKLTELGA 683
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 109/217 (50%), Gaps = 12/217 (5%)
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
WN I + L + +M G PD +TF +L AC + S++HG +HA +
Sbjct: 95 WNALIRRSVKLGLLDDTLGFYCQMQR-LGWLPDHYTFPFVLKACGEIPSLRHGASVHAIV 153
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR---NVVSWNTIIAAHANHRLGG 386
L +V + N++V MY +CG + ++++F+E+L R ++VSWN+I+AA+
Sbjct: 154 CANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSR 213
Query: 387 SALKLFEQMK---ATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF 443
+AL++ +M + ++PD++T + +L AC ++ G+ + G+ D+
Sbjct: 214 TALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQ-VHGFSVRNGLVDDVFVG 272
Query: 444 TCLIDLLGRAGKLLEA----EEYTKKFPLGQDPIVLG 476
L+ + + K+ EA E KK + + +V G
Sbjct: 273 NALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTG 309
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 190/558 (34%), Positives = 298/558 (53%), Gaps = 51/558 (9%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAG 112
A VF+ + E N + W+ M GH + + + AL+ + M LLPN + F + +CA
Sbjct: 28 AISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAK 87
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA----------- 161
++ +GQQIH + LK G+ +V SLISMY + G DA V+ +
Sbjct: 88 SKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTAL 147
Query: 162 ----------------FE----PNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDR 201
F+ ++VS+NA+I+G+ E +K E+FK M++ + PD
Sbjct: 148 ITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDE 207
Query: 202 FSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRL 261
+ A + C+ S + G +H SN + N ++ LYSK GE E A L
Sbjct: 208 STMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSK---CGEVETACEL 264
Query: 262 IE---EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
+E KD+ISWNT I +H Y++ L +F+EM G P+D T SIL ACA L +
Sbjct: 265 LEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS-GETPNDVTMLSILPACAHLGA 323
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNA------LVNMYAKCGLISCSYKLFNE-MLHRNVVS 371
+ G+ IH ++ + + V V NA L++MYAKCG I + ++ + +R++ +
Sbjct: 324 IDIGRWIHVYIDKKL--KGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLST 381
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
WN +I A H +A +F +M+ GI+PD +TF+GLL+AC+H+G++ G F SM
Sbjct: 382 WNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMR 441
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
+ Y I+P +EH+ C+IDLLG +G EAEE P+ D ++ +LL AC++ ++ +G
Sbjct: 442 QDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELG 501
Query: 492 ERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE-PSYSMIEVQG 550
E AK+L ++P YVLLSN+YA+ G W +V R +L D G+KK+ P S IE+
Sbjct: 502 ESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDS 561
Query: 551 TFEKFTVAEFSHSKIGEI 568
+F + + H + EI
Sbjct: 562 VVHEFIIGDKLHPQNREI 579
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 202/450 (44%), Gaps = 68/450 (15%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C+K+K ++G +H VLK+G D+ V ++++YA+ G++ A+KVFD S R+
Sbjct: 81 LLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRD 140
Query: 68 LVS-------------------------------WSAMISGHHQAGEHLLALEFFSQM-- 94
+VS W+AMISG+ + G + ALE F +M
Sbjct: 141 VVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMK 200
Query: 95 -HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSD 153
++ P+E A+ +SACA S+ G+Q+H++ G+ S + N+LI +Y K G
Sbjct: 201 TNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVET 260
Query: 154 ALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSV 213
A + +++S+N LI G+ ++ +F+ MLR G P+ + L C+
Sbjct: 261 ACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 320
Query: 214 SNDLRKGMILHCLTVK----CKLESNPFVGNTIMALYSKFNLIGEAEK-----AFRLIEE 264
+ G +H K + + + +++ +Y+K I A + AF
Sbjct: 321 LGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFN---- 376
Query: 265 KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ 324
+ L +WN I + +F M + G+ PDD TF +L+AC+ + G+
Sbjct: 377 RSLSTWNAMIFGFAMHGRANAAFDIFSRMRKN-GIEPDDITFVGLLSACSHSGMLDLGRN 435
Query: 325 IHAHLIRMRLNQDVGVGNAL------VNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIA 377
I + QD + L +++ GL + ++ N M + + V W +++
Sbjct: 436 IFR-----SMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLK 490
Query: 378 A---HANHRLGGSALKLFEQMKATGIKPDS 404
A H N LG S K K I+P++
Sbjct: 491 ACKIHGNLELGESFAK-----KLIKIEPEN 515
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 155/326 (47%), Gaps = 18/326 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++++++ C+++ +++ G +H+ + G ++ + N +++LY+KCG++ A ++ + +
Sbjct: 209 TMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGL 268
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
S ++++SW+ +I G+ + AL F +M PN+ S + ACA + ++ G+
Sbjct: 269 SNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGR 328
Query: 121 QIHAYSLK----FGYASISFVGNSLISMYMKVGYSSDALLVY-GEAFEPNLVSFNALIAG 175
IH Y K + S + SLI MY K G A V AF +L ++NA+I G
Sbjct: 329 WIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFG 388
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-----ILHCLTVKC 230
F + + F++F M + G+ PD +F G L CS S L G + +
Sbjct: 389 FAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITP 448
Query: 231 KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKGLSV 289
KLE ++ L L EAE+ + E D + W + + AC + E G S
Sbjct: 449 KLEHY----GCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESF 504
Query: 290 FKEMSNDHGVRPDDFTFASILAACAG 315
K++ P + S + A AG
Sbjct: 505 AKKLIKIEPENPGSYVLLSNIYATAG 530
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 125/266 (46%), Gaps = 34/266 (12%)
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
L F+ + A F I E + + WN + +D L ++ M + G+ P+ F
Sbjct: 18 LSPHFDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMIS-LGLLPNFF 76
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC------------- 351
TF +L +CA + + G+QIH H++++ + D+ V +L++MYA+
Sbjct: 77 TFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRS 136
Query: 352 ------------------GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFE 393
G I + K+F+E+ ++VVSWN +I+ +A AL+LF+
Sbjct: 137 SHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFK 196
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 453
+M T +KPD T +++AC +G ++ G +S +G +++ LIDL +
Sbjct: 197 EMMKTNVKPDESTMATVVSACAQSGSIELGRQ-VHSWINDHGFGSNLKIVNALIDLYSKC 255
Query: 454 GKLLEAEEYTKKFPLGQDPIVLGTLL 479
G++ A E + +D I TL+
Sbjct: 256 GEVETACELLEGLS-NKDVISWNTLI 280
>gi|359492597|ref|XP_002282781.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Vitis vinifera]
Length = 724
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 187/550 (34%), Positives = 298/550 (54%), Gaps = 12/550 (2%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+++ L+ C + + QG ++H +K G+ D V N + ++YAKC + A +F+E
Sbjct: 155 RTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKNALTSMYAKCADLQAAEVLFEE 214
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQI 122
+ E+ VSW+ MI + Q G A+ F QM E + + IS + L
Sbjct: 215 IFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIISLLSANAHL---DST 271
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H Y +K G+A+ + V SL+ Y G A L+Y + NLVS A+I+G+ E
Sbjct: 272 HCYVIKTGFATDASVITSLVCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNM 331
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E F ML+ + PD + L + + G+ +H +K L ++ V N +
Sbjct: 332 GLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVVNGL 391
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+++YSKF I F + EK LISWN+ I+AC + +F +M +G PD
Sbjct: 392 ISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSDAMELFCQMRM-YGHSPD 450
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
T AS+LA C+ + +Q G+++H +++R L+ + + ALV+MY KCG + + ++F
Sbjct: 451 AITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVFK 510
Query: 363 EMLHRNVVSWNTIIAAHA----NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+ + +WNT+I+ + HR AL + +M+ G+KPD +TF+G+L+AC H G
Sbjct: 511 SIKEPCLATWNTMISGYGLSGHEHR----ALSCYSEMQEQGLKPDRITFLGVLSACTHGG 566
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV EG+ YF SM + +G+ P ++H C++DLL RAG L EA + K + D + G L
Sbjct: 567 LVWEGKRYFRSMREDFGMIPGLQHNACMVDLLSRAGFLEEAVIFVKNMEVEPDSAIWGAL 626
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L++C + +++ +GE LAK+L L + YVL+SNLYAS G W DVA RKM+KD+G
Sbjct: 627 LTSCCIHQELKLGECLAKRLLLLDYYSGGLYVLMSNLYASKGRWDDVARVRKMMKDTGGD 686
Query: 539 KEPSYSMIEV 548
S+IEV
Sbjct: 687 GSSGISLIEV 696
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 126/460 (27%), Positives = 219/460 (47%), Gaps = 20/460 (4%)
Query: 15 TKALQQGISLHAAVL-----KMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLV 69
T+AL + A + K G V ++ L+ Y K G + A+ +F+EM R++V
Sbjct: 61 TRALDANTKIEANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVV 120
Query: 70 SWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYS 126
SW+A+I G+ + G ALE F QM P + + +C + +G+ IH +
Sbjct: 121 SWNALICGYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFG 180
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
+K G V N+L SMY K A +++ E FE VS+N +I + +N ++
Sbjct: 181 IKSGLDLDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAM 240
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
VFK M ++ + ++ + + S + L HC +K ++ V +++ Y
Sbjct: 241 LVFKQMQKERV---EVNYVTIISLLSANAHLDS---THCYVIKTGFATDASVITSLVCSY 294
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
+ I A + L+ +++L+S I+ + + + F +M ++PD
Sbjct: 295 AGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLK-MKPDAVAM 353
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
SIL + G IHA+ ++ L D V N L++MY+K G I + LF+EM
Sbjct: 354 VSILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGE 413
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
+ ++SWN++I+A A++LF QM+ G PD++T LL C+ G ++ GE
Sbjct: 414 KQLISWNSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERL 473
Query: 427 FNSMEKTYGISPDIEHF--TCLIDLLGRAGKLLEAEEYTK 464
N + + + D+E F T L+D+ + G+L AE K
Sbjct: 474 HNYVLRN---NLDMEDFLETALVDMYIKCGRLESAERVFK 510
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 186/436 (42%), Gaps = 52/436 (11%)
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
++ QI + K G+ ++ + + Y K+G A ++ E ++VS+NALI G+
Sbjct: 70 IEANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGY 129
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
N EVF MLR+G P + + G + C + + +G +H +K L+ +
Sbjct: 130 SRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDC 189
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
V N + ++Y+K + AE F I EK +SWNT I A +++ + VFK+M +
Sbjct: 190 RVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKE 249
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
V + T S+L+A A L S H ++I+ D V +LV YA CG I
Sbjct: 250 R-VEVNYVTIISLLSANAHLDST------HCYVIKTGFATDASVITSLVCSYAGCGNIES 302
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ L+N M RN+VS +I+ +A G ++ F QM +KPD+V + +L
Sbjct: 303 AGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTD 362
Query: 417 AGLVKEG---EAY------------FNSMEKTYGISPDIEHFTCLIDLLG---------- 451
+ G AY N + Y DIE L +G
Sbjct: 363 PTFIGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSV 422
Query: 452 -----RAGKLLEAEEY---TKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQP 503
+ G+ +A E + + D I + +LL+ C + GERL
Sbjct: 423 ISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHN------- 475
Query: 504 TTTSPYVLLSNLYASD 519
YVL +NL D
Sbjct: 476 -----YVLRNNLDMED 486
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 113/214 (52%), Gaps = 3/214 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++ S+LH + + G+ +HA LK G+ D +V N ++++Y+K G + +F
Sbjct: 350 AVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFS 409
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVK 118
EM E+ L+SW+++IS Q G A+E F QM + P+ AS ++ C+ + L
Sbjct: 410 EMGEKQLISWNSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQF 469
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+++H Y L+ F+ +L+ MY+K G A V+ EP L ++N +I+G+
Sbjct: 470 GERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPCLATWNTMISGYGL 529
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
+ + + M QGL PDR +F G L C+
Sbjct: 530 SGHEHRALSCYSEMQEQGLKPDRITFLGVLSACT 563
>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 764
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 181/558 (32%), Positives = 302/558 (54%), Gaps = 10/558 (1%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG- 82
LH + + G D+ +SN +L++Y KC + +RK+FD M +R+LVSW++++S + Q G
Sbjct: 189 LHGSAILYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGY 248
Query: 83 --EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
E LL L+ P+ F S +S A L G+ +H L+ + + V S
Sbjct: 249 ICEVLLLLKTMRIQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETS 308
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
LI MY+K G A ++ + + ++V + A+I+G V+N +K VF+ ML+ G+
Sbjct: 309 LIVMYLKGGNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSS 368
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+ A + C+ G +H + +L + N+++ +++K + ++ F
Sbjct: 369 TATMASVITACAQLGSYNLGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFD 428
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ +++L+SWN I + K L +F EM +DH PD T S+L CA +
Sbjct: 429 KMNKRNLVSWNAMITGYAQNGYVCKALFLFNEMRSDHQT-PDSITIVSLLQGCASTGQLH 487
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
GK IH+ +IR L + V +LV+MY KCG + + + FN+M ++VSW+ II +
Sbjct: 488 LGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYG 547
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
H G +AL+ + + +G+KP+ V F+ +L++C+H GLV++G + SM + +GI+P++
Sbjct: 548 YHGKGETALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPNL 607
Query: 441 EHFTCLIDLLGRAGKLLEAEE-YTKKFPLGQDPI--VLGTLLSACRLRRDVVIGERLAKQ 497
EH C++DLL RAG++ EA Y KKF DP+ VLG +L ACR + +G+ +A
Sbjct: 608 EHHACVVDLLSRAGRVEEAYNLYKKKF---SDPVLDVLGIILDACRANGNNELGDTIAND 664
Query: 498 LFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTV 557
+ L+P +V L++ YAS W +V A ++ GLKK P +S I++ GT F
Sbjct: 665 ILMLKPMDAGNFVQLAHCYASINKWEEVGEAWTHMRSLGLKKIPGWSFIDIHGTITTFFT 724
Query: 558 AEFSHSKIGEINYMLKTL 575
SH + EI LK L
Sbjct: 725 DHNSHPQFQEIVCTLKFL 742
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 141/469 (30%), Positives = 238/469 (50%), Gaps = 8/469 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + SLL CS G+SLH +L G+ D +++ ++N YAK G +ARKVFD
Sbjct: 69 AYTFPSLLKACSSLNLFSLGLSLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFD 128
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQ 121
M ERN+V W+++I + + G A F +M + + +S G+ L Q
Sbjct: 129 FMPERNVVPWTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQC 188
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H ++ +G+ S + NS++SMY K + ++ + +LVS+N+L++ + +
Sbjct: 189 LHGSAILYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGY 248
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ + K M QG PD +F L + + +L+ G LH ++ + + V +
Sbjct: 249 ICEVLLLLKTMRIQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETS 308
Query: 242 IMALYSKFNLIGEAEKAFRLIE---EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++ +Y K G + AFR+ E +KD++ W I+ +K L+VF++M G
Sbjct: 309 LIVMYLKG---GNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLK-FG 364
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
V+ T AS++ ACA L S G +H ++ R L D+ N+LV M+AKCG + S
Sbjct: 365 VKSSTATMASVITACAQLGSYNLGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSS 424
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+F++M RN+VSWN +I +A + AL LF +M++ PDS+T + LL C G
Sbjct: 425 IVFDKMNKRNLVSWNAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTG 484
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+ G+ + +S G+ P I T L+D+ + G L A+ + P
Sbjct: 485 QLHLGK-WIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMP 532
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 187/390 (47%), Gaps = 8/390 (2%)
Query: 70 SWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYS 126
S++A+I+ H G H L ++ M H+ + Y F S + AC+ + G +H
Sbjct: 36 SFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQRI 95
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
L G + +++ +SLI+ Y K G++ A V+ E N+V + ++I + + + F
Sbjct: 96 LVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAF 155
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
+F M RQG+ P + L + ++L LH + S+ + N+++++Y
Sbjct: 156 SLFDEMRRQGIQPSSVTM---LSLLFGVSELAHVQCLHGSAILYGFMSDINLSNSMLSMY 212
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
K I + K F ++++DL+SWN+ ++A + + L + K M G PD TF
Sbjct: 213 GKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTM-RIQGFEPDPQTF 271
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
S+L+ A ++ G+ +H ++R + D V +L+ MY K G I ++++F L
Sbjct: 272 GSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFERSLD 331
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
++VV W +I+ + AL +F QM G+K + T ++TAC G G +
Sbjct: 332 KDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYNLGTSV 391
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
M + + + DI L+ + + G L
Sbjct: 392 HGYMFR-HELPMDIATQNSLVTMHAKCGHL 420
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 113/261 (43%), Gaps = 31/261 (11%)
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
S+N I S + + L+ + M H V D +TF S+L AC+ L G +H
Sbjct: 36 SFNAIINHHSSQGAHRQVLATYASMLKTH-VPSDAYTFPSLLKACSSLNLFSLGLSLHQR 94
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
++ L+ D + ++L+N YAK G + K+F+ M RNVV W +II ++ A
Sbjct: 95 ILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEA 154
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK--EGEAYF----------NSMEKTYGI 436
LF++M+ GI+P SVT + LL + V+ G A NSM YG
Sbjct: 155 FSLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQCLHGSAILYGFMSDINLSNSMLSMYGK 214
Query: 437 SPDIEH---------------FTCLIDLLGRAGKLLEAEEYTKKFPLG---QDPIVLGTL 478
+IE+ + L+ + G + E K + DP G++
Sbjct: 215 CRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTFGSV 274
Query: 479 LSACRLRRDVVIGERLAKQLF 499
LS R ++ +G L Q+
Sbjct: 275 LSVAASRGELKLGRCLHGQIL 295
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 99/187 (52%), Gaps = 5/187 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I SLL C+ T L G +H+ V++ G++P ++V ++++Y KCG + +A++ F++M
Sbjct: 472 TIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQM 531
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+LVSWSA+I G+ G+ AL F+S+ + PN IF S +S+C+ + +G
Sbjct: 532 PSHDLVSWSAIIVGYGYHGKGETALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGL 591
Query: 121 QIH-AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF-EPNLVSFNALIAGFVE 178
I+ + + FG A ++ + + G +A +Y + F +P L ++
Sbjct: 592 NIYESMTRDFGIAPNLEHHACVVDLLSRAGRVEEAYNLYKKKFSDPVLDVLGIILDACRA 651
Query: 179 NQQPEKG 185
N E G
Sbjct: 652 NGNNELG 658
>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Brachypodium distachyon]
Length = 757
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 183/583 (31%), Positives = 313/583 (53%), Gaps = 14/583 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S + C++ + G +HA +K D+IV N ++ +Y+K G + +F M
Sbjct: 144 ALGSTVRACAELGDIGVGRQVHAQAMKSENGSDLIVQNALVTMYSKSGLVADGFLLFGRM 203
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM------HLLPNEYIFASAISACAGIQSLV 117
E++ +SW ++I+G Q G + AL+ F +M H PNE+ F S SAC + SL
Sbjct: 204 REKDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHH--PNEFHFGSVFSACGVLGSLE 261
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+QIH+ S+K+ S+ G SL MY + A V+ P+LVS+N++I
Sbjct: 262 YGEQIHSLSVKYRLDHNSYAGCSLSDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACS 321
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ + M GL PD + G L C + ++ G ++H VK L+ +
Sbjct: 322 VEGLLSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVS 381
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N+++++Y++ A F ++D+++WN+ + AC E +F +
Sbjct: 382 VCNSLLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTACVQHQHLEVVFKLFNLLQRS- 440
Query: 298 GVRP--DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
P D + ++L+A A L + KQ+H ++ L D + N L++ YAKCG +
Sbjct: 441 --LPSLDRISLNNVLSASAELGYFEMVKQVHTCTFKVGLVNDTMLSNGLIDTYAKCGSLD 498
Query: 356 CSYKLFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ KLF M + +V SW+++I +A AL LF +M+ G++P+ VTF+G+LTAC
Sbjct: 499 DAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARMRNLGVRPNHVTFVGVLTAC 558
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
+ GLV EG Y++ ME +G+ P EH +C+IDLL RAG+L EA ++ + P D ++
Sbjct: 559 SRVGLVDEGCYYYSIMEPEHGVLPTREHCSCVIDLLARAGRLTEAAKFVDQMPFEPDIVM 618
Query: 475 LGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKD 534
TLL+ + DV +G R A+ + ++ P+ ++ YVLL N+Y++ G W + A +K ++
Sbjct: 619 WKTLLAGSKTHNDVEMGRRAAEGILNIDPSHSAAYVLLCNIYSASGDWNEFARLKKAMRS 678
Query: 535 SGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
SG+KK P S ++++G + F V + SH + EI ML+ + +
Sbjct: 679 SGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYTMLELVGM 721
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 143/464 (30%), Positives = 246/464 (53%), Gaps = 27/464 (5%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPD------VIVSNHVLNLYAKCGKMILARKVFDEMSE 65
CS+ +AL G +H +L PD +++NH++ +Y +C AR VFDEM
Sbjct: 48 CSRLRALCLGCLVHRHLLA---SPDPNLVRNTVLNNHLITMYGRCAAPESARLVFDEMPA 104
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQI 122
+N VSW+++I+ H Q AL FS M P+++ S + ACA + + G+Q+
Sbjct: 105 KNPVSWASVIAAHAQNRRSTDALGLFSSMLRSGTAPDQFALGSTVRACAELGDIGVGRQV 164
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
HA ++K S V N+L++MY K G +D L++G E + +S+ ++IAGF +
Sbjct: 165 HAQAMKSENGSDLIVQNALVTMYSKSGLVADGFLLFGRMREKDPISWGSIIAGFAQQGCE 224
Query: 183 EKGFEVFKLMLRQGL-LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ ++F+ M+ +G+ P+ F F C V L G +H L+VK +L+ N + G +
Sbjct: 225 MEALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSVKYRLDHNSYAGCS 284
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+ +Y++ + A++ F I+ DL+SWN+ I ACS + + + EM G+RP
Sbjct: 285 LSDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSEMRGS-GLRP 343
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D T +L AC G ++QHG+ +H++L+++ L+ DV V N+L++MYA+C S + +F
Sbjct: 344 DGITVRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVF 403
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+E R+VV+WN+I+ A H+ KLF ++ + D ++ +L+A G
Sbjct: 404 HETRDRDVVTWNSILTACVQHQHLEVVFKLFNLLQRSLPSLDRISLNNVLSASAELG--- 460
Query: 422 EGEAYFNSMEKTY------GISPDIEHFTCLIDLLGRAGKLLEA 459
YF +++ + G+ D LID + G L +A
Sbjct: 461 ----YFEMVKQVHTCTFKVGLVNDTMLSNGLIDTYAKCGSLDDA 500
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 193/376 (51%), Gaps = 5/376 (1%)
Query: 110 CAGIQSLVKGQQIHAYSLKFGYASI---SFVGNSLISMYMKVGYSSDALLVYGEAFEPNL 166
C+ +++L G +H + L ++ + + N LI+MY + A LV+ E N
Sbjct: 48 CSRLRALCLGCLVHRHLLASPDPNLVRNTVLNNHLITMYGRCAAPESARLVFDEMPAKNP 107
Query: 167 VSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCL 226
VS+ ++IA +N++ +F MLR G PD+F+ + C+ D+ G +H
Sbjct: 108 VSWASVIAAHAQNRRSTDALGLFSSMLRSGTAPDQFALGSTVRACAELGDIGVGRQVHAQ 167
Query: 227 TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKG 286
+K + S+ V N ++ +YSK L+ + F + EKD ISW + IA + +
Sbjct: 168 AMKSENGSDLIVQNALVTMYSKSGLVADGFLLFGRMREKDPISWGSIIAGFAQQGCEMEA 227
Query: 287 LSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVN 346
L +F+EM + P++F F S+ +AC L S+++G+QIH+ ++ RL+ + G +L +
Sbjct: 228 LQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSVKYRLDHNSYAGCSLSD 287
Query: 347 MYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVT 406
MYA+C + + ++F + ++VSWN+II A + L A+ L +M+ +G++PD +T
Sbjct: 288 MYARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLRPDGIT 347
Query: 407 FIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
GLL AC ++ G + + K G+ D+ L+ + R A + +
Sbjct: 348 VRGLLCACVGCDAIQHGRLMHSYLVK-LGLDGDVSVCNSLLSMYARCMDFSSAMDVFHE- 405
Query: 467 PLGQDPIVLGTLLSAC 482
+D + ++L+AC
Sbjct: 406 TRDRDVVTWNSILTAC 421
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 196/612 (32%), Positives = 311/612 (50%), Gaps = 46/612 (7%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYA--KCGKMILARKVFDEMS 64
+LL C +L+Q +H+ ++K G+ + + ++ A + A +F +
Sbjct: 30 NLLAKCPDIPSLKQ---IHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIH 86
Query: 65 ER--NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
+ N+ W+ +I H +L FSQM L PN + F S +CA ++ +
Sbjct: 87 HQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEA 146
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVG------------------------------ 149
+Q+HA++LK V SLI MY +VG
Sbjct: 147 KQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSE 206
Query: 150 -YSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGL 208
+ DA ++ E ++VS+NA+IAG+V++ + E+ F M + P++ + L
Sbjct: 207 GHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVL 266
Query: 209 EICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLI 268
C L G + N + N ++ +YSK IG A K F +E+KD+I
Sbjct: 267 SACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVI 326
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
WNT I H + YE+ L +F+ M ++ V P+D TF ++L ACA L ++ GK +HA+
Sbjct: 327 LWNTMIGGYCHLSLYEEALVLFEVMLREN-VTPNDVTFLAVLPACASLGALDLGKWVHAY 385
Query: 329 LIRMRLN----QDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
+ + +V + +++ MYAKCG + + ++F M R++ SWN +I+ A +
Sbjct: 386 IDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGH 445
Query: 385 GGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFT 444
AL LFE+M G +PD +TF+G+L+AC AG V+ G YF+SM K YGISP ++H+
Sbjct: 446 AERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYG 505
Query: 445 CLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPT 504
C+IDLL R+GK EA+ + D + G+LL+ACR+ V GE +A++LF L+P
Sbjct: 506 CMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPE 565
Query: 505 TTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSK 564
+ YVLLSN+YA G W DVA R L D G+KK P + IE+ G +F V + H +
Sbjct: 566 NSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQ 625
Query: 565 IGEINYMLKTLS 576
I ML +
Sbjct: 626 SENIFRMLDEVD 637
>gi|125525521|gb|EAY73635.1| hypothetical protein OsI_01524 [Oryza sativa Indica Group]
Length = 560
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 180/531 (33%), Positives = 290/531 (54%), Gaps = 10/531 (1%)
Query: 51 GKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAI 107
G + AR +FDEM ER++V+W+AM+SG+ G AL+ F +M PNEY +S +
Sbjct: 17 GAVCHARALFDEMPERDVVAWTAMLSGYASNGLRREALDVFRRMVAAGAAPNEYTLSSVL 76
Query: 108 SACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKV--GYSSDALLVYGEAFEPN 165
+AC G + +HA +++ G + +V N+LI Y + G L
Sbjct: 77 TACRGPCAPAMAMPLHAVAVRRGVDRMPYVVNALIDSYASLAEGVVDARRLFDALGSGRT 136
Query: 166 LVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHC 225
S+ ++IAG+ Q G +FK ML+ G+ F+ + L C++ DL G LH
Sbjct: 137 AASWTSMIAGYARWGQERTGLRLFKTMLKDGVELSTFACSIALHACTLVIDLCLGQQLHL 196
Query: 226 LTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEK 285
+K L+ N V N+++ +Y I +A F E++LI+WNT IA S C D
Sbjct: 197 QCIKKALDVNLAVVNSLIDMYCTCARILDARSLFDGTPERNLITWNTMIAGYSQC-DPLM 255
Query: 286 GLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALV 345
L + EM+++ P+ FT SI +ACA LA+++ GKQ+H ++R + D+ +GNALV
Sbjct: 256 ALQLLLEMNDE----PNCFTLTSITSACADLAALRCGKQVHGAVLRRSYSDDLQMGNALV 311
Query: 346 NMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV 405
+MY+KCG I+ + +F+ M ++ SW ++IA + + G A++LF M G+ PD V
Sbjct: 312 DMYSKCGSITNAKNVFDRMGCKDKFSWTSMIAGYGMNGYGNEAVQLFSSMIHAGVHPDHV 371
Query: 406 TFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKK 465
F+ L+++C+HAGLV EG +F SM Y + P+ E + +++LL RAG+L EA +
Sbjct: 372 VFLSLISSCSHAGLVDEGWNFFRSMINEYNLQPNKEVYGSVVNLLARAGRLREALDLIDT 431
Query: 466 FPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDV 525
P D V G LL A ++ +V +G A+++ + P Y++L+++YA+ WG+
Sbjct: 432 MPFAPDEYVWGALLGASKMHNNVEMGRLAARKITEINPDDVKNYIMLASIYAAGSKWGEY 491
Query: 526 AGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
A R+ L+ G +KE S IEV FT A+ S ++ + +L LS
Sbjct: 492 AFTRRSLRGIGSRKEAGISWIEVMDKMYSFTAADSSSPQVCLADEVLHILS 542
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 209/478 (43%), Gaps = 22/478 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMIL-ARKVFDE 62
++SS+L C A + LHA ++ G+ V N +++ YA + ++ AR++FD
Sbjct: 71 TLSSVLTACRGPCAPAMAMPLHAVAVRRGVDRMPYVVNALIDSYASLAEGVVDARRLFDA 130
Query: 63 M-SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEY-IFASAIS--ACAGIQSLVK 118
+ S R SW++MI+G+ + G+ L F M E FA +I+ AC + L
Sbjct: 131 LGSGRTAASWTSMIAGYARWGQERTGLRLFKTMLKDGVELSTFACSIALHACTLVIDLCL 190
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
GQQ+H +K V NSLI MY DA ++ E NL+++N +IAG+ +
Sbjct: 191 GQQLHLQCIKKALDVNLAVVNSLIDMYCTCARILDARSLFDGTPERNLITWNTMIAGYSQ 250
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+L+L P+ F+ C+ LR G +H ++ + +
Sbjct: 251 CDP----LMALQLLLEMNDEPNCFTLTSITSACADLAALRCGKQVHGAVLRRSYSDDLQM 306
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
GN ++ +YSK I A+ F + KD SW + IA + + +F M + G
Sbjct: 307 GNALVDMYSKCGSITNAKNVFDRMGCKDKFSWTSMIAGYGMNGYGNEAVQLFSSMIH-AG 365
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLI-RMRLNQDVGVGNALVNMYAKCGLISCS 357
V PD F S++++C+ V G +I L + V ++VN+ A+ G + +
Sbjct: 366 VHPDHVVFLSLISSCSHAGLVDEGWNFFRSMINEYNLQPNKEVYGSVVNLLARAGRLREA 425
Query: 358 YKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
L + M + W ++ A H N +G A + K T I PD V +L +
Sbjct: 426 LDLIDTMPFAPDEYVWGALLGASKMHNNVEMGRLAAR-----KITEINPDDVKNYIMLAS 480
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQD 471
AG K GE F + GI E I+++ + A+ + + L +
Sbjct: 481 IYAAG-SKWGEYAF-TRRSLRGIGSRKEAGISWIEVMDKMYSFTAADSSSPQVCLADE 536
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 155/326 (47%), Gaps = 10/326 (3%)
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
+ IS G A ++ E E ++V++ A+++G+ N + +VF+ M+ G
Sbjct: 6 ATTFISSLCSRGAVCHARALFDEMPERDVVAWTAMLSGYASNGLRREALDVFRRMVAAGA 65
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF-NLIGEAE 256
P+ ++ + L C M LH + V+ ++ P+V N ++ Y+ + +A
Sbjct: 66 APNEYTLSSVLTACRGPCAPAMAMPLHAVAVRRGVDRMPYVVNALIDSYASLAEGVVDAR 125
Query: 257 KAFR-LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
+ F L + SW + IA + GL +FK M D GV F + L AC
Sbjct: 126 RLFDALGSGRTAASWTSMIAGYARWGQERTGLRLFKTMLKD-GVELSTFACSIALHACTL 184
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
+ + G+Q+H I+ L+ ++ V N+L++MY C I + LF+ RN+++WNT+
Sbjct: 185 VIDLCLGQQLHLQCIKKALDVNLAVVNSLIDMYCTCARILDARSLFDGTPERNLITWNTM 244
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNS-MEKTY 434
IA ++ AL+L +M +P+ T + +AC ++ G+ + + ++Y
Sbjct: 245 IAGYSQCD-PLMALQLLLEMND---EPNCFTLTSITSACADLAALRCGKQVHGAVLRRSY 300
Query: 435 GISPDIEHFTCLIDLLGRAGKLLEAE 460
S D++ L+D+ + G + A+
Sbjct: 301 --SDDLQMGNALVDMYSKCGSITNAK 324
>gi|57899090|dbj|BAD86909.1| putative PPR986-12 [Oryza sativa Japonica Group]
Length = 560
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 180/531 (33%), Positives = 290/531 (54%), Gaps = 10/531 (1%)
Query: 51 GKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAI 107
G + AR +FDEM ER++V+W+AM+SG+ G AL+ F +M PNEY +S +
Sbjct: 17 GAVCHARALFDEMPERDVVAWTAMLSGYASNGLRREALDVFRRMVAAGAAPNEYTLSSVL 76
Query: 108 SACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKV--GYSSDALLVYGEAFEPN 165
+AC G + +HA +++ G + +V N+LI Y + G L
Sbjct: 77 TACRGPCAPAMAMPLHAVAVRRGVDRMPYVVNALIDSYASLAEGVVDARRLFDALGSGRT 136
Query: 166 LVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHC 225
S+ ++IAG+ Q G +FK ML+ G+ F+ + L C++ DL G LH
Sbjct: 137 AASWTSMIAGYARWGQERTGLRLFKTMLKDGVELSTFACSIALHACTLVIDLCLGQQLHL 196
Query: 226 LTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEK 285
+K L+ N V N+++ +Y I +A F E++LI+WNT IA S C D
Sbjct: 197 QCIKKALDVNLAVVNSLIDMYCTCARILDARSLFDGTPERNLITWNTMIAGYSQC-DPLM 255
Query: 286 GLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALV 345
L + EM+++ P+ FT SI +ACA LA+++ GKQ+H ++R + D+ +GNALV
Sbjct: 256 ALQLLLEMNDE----PNCFTLTSITSACADLAALRCGKQVHGAVLRRSYSDDLQMGNALV 311
Query: 346 NMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV 405
+MY+KCG I+ + +F+ M ++ SW ++IA + + G A++LF M G+ PD V
Sbjct: 312 DMYSKCGSITNAKNVFDRMGCKDKFSWTSMIAGYGMNGYGNEAVQLFSSMIHAGVHPDHV 371
Query: 406 TFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKK 465
F+ L+++C+HAGLV EG +F SM Y + P+ E + +++LL RAG+L EA +
Sbjct: 372 VFLSLISSCSHAGLVDEGWNFFRSMINEYNLQPNKEVYGSVVNLLARAGRLREALDLIDT 431
Query: 466 FPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDV 525
P D V G LL A ++ +V +G A+++ + P Y++L+++YA+ WG+
Sbjct: 432 MPFAPDEYVWGALLGASKMHNNVEMGRLAARKITEINPDDVKNYIMLASIYAAGSKWGEY 491
Query: 526 AGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
A R+ L+ G +KE S IEV FT A+ S ++ + +L LS
Sbjct: 492 AFTRRSLRGIGSRKEAGISWIEVMDKMYSFTAADSSSPQVCLADEVLHILS 542
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 209/478 (43%), Gaps = 22/478 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMIL-ARKVFDE 62
++SS+L C A + LHA ++ G+ V N +++ YA + ++ AR++FD
Sbjct: 71 TLSSVLTACRGPCAPAMAMPLHAVAVRRGVDRMPYVVNALIDSYASLAEGVVDARRLFDA 130
Query: 63 M-SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEY-IFASAIS--ACAGIQSLVK 118
+ S R SW++MI+G+ + G+ L F M E FA +I+ AC + L
Sbjct: 131 LGSGRTAASWTSMIAGYARWGQERTGLRLFKTMLKDGVELSTFACSIALHACTLVIDLCL 190
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
GQQ+H +K V NSLI MY DA ++ E NL+++N +IAG+ +
Sbjct: 191 GQQLHLQCIKKALDVNLAVVNSLIDMYCTCARILDARSLFDGTPERNLITWNTMIAGYSQ 250
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+L+L P+ F+ C+ LR G +H ++ + +
Sbjct: 251 CDP----LMALQLLLEMNDEPNCFTLTSITSACADLAALRCGKQVHGAVLRRSYSDDLQM 306
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
GN ++ +YSK I A+ F + KD SW + IA + + +F M + G
Sbjct: 307 GNALVDMYSKCGSITNAKNVFDRMGCKDKFSWTSMIAGYGMNGYGNEAVQLFSSMIH-AG 365
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLI-RMRLNQDVGVGNALVNMYAKCGLISCS 357
V PD F S++++C+ V G +I L + V ++VN+ A+ G + +
Sbjct: 366 VHPDHVVFLSLISSCSHAGLVDEGWNFFRSMINEYNLQPNKEVYGSVVNLLARAGRLREA 425
Query: 358 YKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
L + M + W ++ A H N +G A + K T I PD V +L +
Sbjct: 426 LDLIDTMPFAPDEYVWGALLGASKMHNNVEMGRLAAR-----KITEINPDDVKNYIMLAS 480
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQD 471
AG K GE F + GI E I+++ + A+ + + L +
Sbjct: 481 IYAAG-SKWGEYAF-TRRSLRGIGSRKEAGISWIEVMDKMYSFTAADSSSPQVCLADE 536
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 156/326 (47%), Gaps = 10/326 (3%)
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
+LIS G A ++ E E ++V++ A+++G+ N + +VF+ M+ G
Sbjct: 6 ATTLISSLCSRGAVCHARALFDEMPERDVVAWTAMLSGYASNGLRREALDVFRRMVAAGA 65
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF-NLIGEAE 256
P+ ++ + L C M LH + V+ ++ P+V N ++ Y+ + +A
Sbjct: 66 APNEYTLSSVLTACRGPCAPAMAMPLHAVAVRRGVDRMPYVVNALIDSYASLAEGVVDAR 125
Query: 257 KAFR-LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
+ F L + SW + IA + GL +FK M D GV F + L AC
Sbjct: 126 RLFDALGSGRTAASWTSMIAGYARWGQERTGLRLFKTMLKD-GVELSTFACSIALHACTL 184
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
+ + G+Q+H I+ L+ ++ V N+L++MY C I + LF+ RN+++WNT+
Sbjct: 185 VIDLCLGQQLHLQCIKKALDVNLAVVNSLIDMYCTCARILDARSLFDGTPERNLITWNTM 244
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNS-MEKTY 434
IA ++ AL+L +M +P+ T + +AC ++ G+ + + ++Y
Sbjct: 245 IAGYSQCD-PLMALQLLLEMND---EPNCFTLTSITSACADLAALRCGKQVHGAVLRRSY 300
Query: 435 GISPDIEHFTCLIDLLGRAGKLLEAE 460
S D++ L+D+ + G + A+
Sbjct: 301 --SDDLQMGNALVDMYSKCGSITNAK 324
>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
Length = 771
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 178/559 (31%), Positives = 299/559 (53%), Gaps = 6/559 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+ S++ C + G+S+H VLK G+ V + N ++++Y K G + + +VF+ M
Sbjct: 215 SLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKFGDLESSMRVFNGM 274
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFF---SQMHLLPNEYIFASAISACAGIQSLVKGQ 120
E+N VSW++ + AG H LE F S+ + P +S + A + G+
Sbjct: 275 QEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLGK 334
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H YS++ S F+ NSL+ MY K G A ++ N+VS+NA+IA +N
Sbjct: 335 EVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIANLAQNG 394
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ F + M + G P+ F+ L CS ++ G +H ++ L S+ FV N
Sbjct: 395 AETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSLMSDLFVSN 454
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y+K + A+ F EKD +S+NT I S + L +F++M + G+
Sbjct: 455 ALIDVYAKCGQLSVAQDIFDR-SEKDDVSYNTLIVGYSQSQCCFESLHLFQQMRSA-GIE 512
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D +F L+ACA L++ + GK+IH L+R LN + N+L+++Y K G+++ + K+
Sbjct: 513 YDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLANSLLDLYTKGGMLATASKI 572
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN + ++V SWNT+I + H A +LF+ MK G+ D V++I +L+AC+H GLV
Sbjct: 573 FNRITRKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDHVSYIAVLSACSHGGLV 632
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
G+ YF+ M I P H+ C++DLLGRAG+L E+ E P + V G LL
Sbjct: 633 DRGKKYFSQM-IAQNIKPQQMHYACMVDLLGRAGQLSESVEIITNMPFPANSDVWGALLG 691
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
+CR+ D+ + A+ LF L+P + Y LL N+Y+ GMW + + ++K ++K
Sbjct: 692 SCRIHGDIELARLAAEHLFELKPEHSGYYTLLRNMYSESGMWNEANEIKTLMKSRKVQKN 751
Query: 541 PSYSMIEVQGTFEKFTVAE 559
P+YS ++ + F V +
Sbjct: 752 PAYSWVQSGNKLQAFLVGD 770
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 191/369 (51%), Gaps = 6/369 (1%)
Query: 118 KGQQIHAYSLKFGYA-SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
KG ++HA +L+ G + F GN+L++ Y G ++DA V+ E ++VS+N+L++
Sbjct: 129 KGAELHAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSAL 188
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
+ N E M+R G+ + S + C D G+ +H L +K L+S
Sbjct: 189 LTNGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVV 248
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
+GN ++ +Y KF + + + F ++EK+ +SWN+ + +H +E L +F+ MS +
Sbjct: 249 NLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMS-E 307
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
H V P T +S+L A L GK++H + IR + D+ + N+L++MYAK G +
Sbjct: 308 HEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEK 367
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ +F + RNVVSWN +IA A + A L +M+ G P+S T + LL AC+
Sbjct: 368 ASAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSR 427
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY---TKKFPLGQDPI 473
VK G+ ++ + D+ LID+ + G+L A++ ++K + + +
Sbjct: 428 VASVKMGKQ-IHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDRSEKDDVSYNTL 486
Query: 474 VLGTLLSAC 482
++G S C
Sbjct: 487 IVGYSQSQC 495
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A S L C+ A +QG +H +++ + ++N +L+LY K G + A K+F+
Sbjct: 515 AVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLANSLLDLYTKGGMLATASKIFN 574
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAI---SACA 111
++ +++ SW+ MI G+ G+ +A E F M +Y S I SAC+
Sbjct: 575 RITRKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDHVSYIAVLSACS 627
>gi|218189824|gb|EEC72251.1| hypothetical protein OsI_05387 [Oryza sativa Indica Group]
Length = 566
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 182/530 (34%), Positives = 296/530 (55%), Gaps = 6/530 (1%)
Query: 25 HAAVLKMGIQPDVIVSNH-VLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
HAA K+G +N +L Y + ++ A+ +FD+M R V+W+ +I GH Q+
Sbjct: 34 HAAATKLGFSASNPFANTALLAFYCRSRRLREAQHLFDQMPLRTAVTWNTLIYGHAQSTA 93
Query: 84 HLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
LA+ F++M + P +S + AC +++ G +H+ L+ G+ + VG +
Sbjct: 94 PDLAVAAFARMVRAGVSPTASSVSSVLVACVRLENAGAGAMLHSVGLRCGFFASVVVGTA 153
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
L+ MY K A V+GE E N+ +F AL+ GFV +++P + + M R G+ P+
Sbjct: 154 LVDMYAKCRRLGAAQQVFGEMEEKNVATFTALVTGFVLSRRPHDAVLLVREMERSGVAPN 213
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+++ L + D+ G +HC +K LE +PFV + ++ +YSK + + K
Sbjct: 214 LMTYSSLLSSFASPEDIDHGKQVHCAVLKKGLEHDPFVLSALVTMYSKCGIWEDFVKVQM 273
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ +D +S+N+ I+ S ++ F EM HG D FTFASIL A +S+
Sbjct: 274 SVSCQDQVSFNSVISGLSCLGRGKEAFQHFLEMRR-HGTDMDVFTFASILKAIGSSSSLL 332
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G+Q+H ++++ + V V N+L++MYA+ G I S +F M N+VSWN++++ A
Sbjct: 333 EGRQVHTLILKIGYDSVVDVQNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCA 392
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSM-EKTYGISPD 439
H G +++FEQM+ ++PD +TF+ +LTAC+H GLV +G YFN M +K Y +
Sbjct: 393 QHGHGKEVVEMFEQMRRLHVQPDHITFLSVLTACSHVGLVDKGLEYFNLMKDKGYLVGAR 452
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLF 499
+H+ C++DLLGRAG L EAE P+ V LLSAC++ ++ I R++K+L
Sbjct: 453 TKHYACMVDLLGRAGYLNEAEYLINGMPIKPGASVYRALLSACQIHGNLEIAIRVSKRLM 512
Query: 500 HLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQ 549
L P +S +V LSN +A DG WG+ A R+ + G+ KEPS+S IE Q
Sbjct: 513 ELNPHDSSVHVQLSNAFAGDGRWGNAAEIRETMSGKGIVKEPSWSRIEDQ 562
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 179/324 (55%), Gaps = 4/324 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A S+SS+L C + + G LH+ L+ G V+V ++++YAKC ++ A++VF
Sbjct: 113 ASSVSSVLVACVRLENAGAGAMLHSVGLRCGFFASVVVGTALVDMYAKCRRLGAAQQVFG 172
Query: 62 EMSERNLVSWSAMISG---HHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVK 118
EM E+N+ +++A+++G + + +L + + + PN ++S +S+ A + +
Sbjct: 173 EMEEKNVATFTALVTGFVLSRRPHDAVLLVREMERSGVAPNLMTYSSLLSSFASPEDIDH 232
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+Q+H LK G FV ++L++MY K G D + V + VSFN++I+G
Sbjct: 233 GKQVHCAVLKKGLEHDPFVLSALVTMYSKCGIWEDFVKVQMSVSCQDQVSFNSVISGLSC 292
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ ++ F+ F M R G D F+FA L+ S+ L +G +H L +K +S V
Sbjct: 293 LGRGKEAFQHFLEMRRHGTDMDVFTFASILKAIGSSSSLLEGRQVHTLILKIGYDSVVDV 352
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N+++++Y++ IGE+ F +E +L+SWN+ ++ C+ ++ + +F++M H
Sbjct: 353 QNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGHGKEVVEMFEQMRRLH- 411
Query: 299 VRPDDFTFASILAACAGLASVQHG 322
V+PD TF S+L AC+ + V G
Sbjct: 412 VQPDHITFLSVLTACSHVGLVDKG 435
>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
Length = 1359
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 181/553 (32%), Positives = 306/553 (55%), Gaps = 6/553 (1%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
++ S + L CS+++ G +H V+KMG+ D VS +L++Y+KCG + A VF
Sbjct: 770 VSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVF 829
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFF---SQMHLLPNEYIFASAISACAGIQSLV 117
+ ++ L W+AM++ + + ALE F Q +LP+ + ++ IS C+
Sbjct: 830 SCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYD 889
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+ +HA K S + ++L+++Y K G +DA LV+ E ++V++ +LI+G
Sbjct: 890 YGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLC 949
Query: 178 ENQQPEKGFEVFKLMLRQ--GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+N + ++ +VF M L PD + C+ L G+ +H +K N
Sbjct: 950 KNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLN 1009
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
FVG++++ LYSK L A K F + +++++WN+ I+ S E + +F M +
Sbjct: 1010 VFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNLMLS 1069
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
G+ PD + S+L A + AS+ GK +H + +R+ + D + NAL++MY KCG
Sbjct: 1070 -QGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSK 1128
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ +F +M H+++++WN +I + +H +AL LF+++K G PD VTF+ L++ACN
Sbjct: 1129 YAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVTFLSLISACN 1188
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
H+G V+EG+ +F M++ YGI P +EH+ ++DLLGRAG+L EA + K P D +
Sbjct: 1189 HSGFVEEGKNFFEIMKQDYGIEPKMEHYANMVDLLGRAGRLEEAYSFIKAMPTEADSSIW 1248
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
LLSA R +V +G A++L ++P S YV L NLY G+ + A +K+
Sbjct: 1249 LCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGEMKER 1308
Query: 536 GLKKEPSYSMIEV 548
GL+K+P S IEV
Sbjct: 1309 GLQKQPGCSWIEV 1321
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 135/464 (29%), Positives = 234/464 (50%), Gaps = 15/464 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SLL CS L G ++H +++ +G + D ++ ++N+Y KCG + A +VFD
Sbjct: 563 TFPSLLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 622
Query: 64 SE-----RNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQS 115
S+ R++ ++MI G+ + + F +M +L P+ + + +S +
Sbjct: 623 SQSGVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGN 682
Query: 116 LVK--GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE-PNLVSFNAL 172
+ G+QIH Y L+ SF+ +LI MY K G S+DA V+ E + N+V +N +
Sbjct: 683 FRREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVM 742
Query: 173 IAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
I GF ++ E E++ L + SF G L CS S + G +HC VK L
Sbjct: 743 IVGFGGSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGL 802
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
+++P+V +++++YSK ++GEAE F + +K L WN +AA + L +F
Sbjct: 803 DNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGF 862
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
M V PD FT +++++ C+ +GK +HA L + + + +AL+ +Y+KCG
Sbjct: 863 M-RQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCG 921
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK--ATGIKPDSVTFIGL 410
+ +Y +F M +++V+W ++I+ + ALK+F MK +KPDS +
Sbjct: 922 CDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSV 981
Query: 411 LTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
+ AC + G SM KT G ++ + LIDL + G
Sbjct: 982 INACAGLEALSFGLQVHGSMIKT-GQVLNVFVGSSLIDLYSKCG 1024
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 212/415 (51%), Gaps = 17/415 (4%)
Query: 80 QAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS 135
Q GE+L AL +++ L + + F S + AC+ + +L G+ IH + G+
Sbjct: 537 QKGEYLQALHLYTKHDGSSPLWTSVFTFPSLLKACSSLTNLSSGKTIHGSIIVLGWRYDP 596
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEP-----NLVSFNALIAGFVENQQPEKGFEVFK 190
F+ SL++MY+K G+ A+ V+ + ++ N++I G+ + ++ ++G F+
Sbjct: 597 FIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGYFKFRRFKEGVGCFR 656
Query: 191 LMLRQGLLPDRFSFAGGLEICSVSNDLRK--GMILHCLTVKCKLESNPFVGNTIMALYSK 248
ML G+ PD FS + + + + R+ G +H ++ L+ + F+ ++ +Y K
Sbjct: 657 RMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRNSLDGDSFLKTALIDMYFK 716
Query: 249 FNLIGEAEKAFRLIEEK-DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFA 307
F L +A + F IE+K +++ WN I E L ++ ++ + V+ +F
Sbjct: 717 FGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSEICESSLELYM-LAKSNSVKLVSTSFT 775
Query: 308 SILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR 367
L AC+ + G+QIH +++M L+ D V +L++MY+KCG++ + +F+ ++ +
Sbjct: 776 GALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDK 835
Query: 368 NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYF 427
+ WN ++AA+ + G SAL+LF M+ + PDS T +++ C+ GL G++
Sbjct: 836 RLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVH 895
Query: 428 NSM-EKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+ ++ +P IE + L+ L + G +A K +D + G+L+S
Sbjct: 896 AELFKRPIQSTPAIE--SALLTLYSKCGCDTDAYLVFKSME-EKDMVAWGSLISG 947
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 16/197 (8%)
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
S N+ I A +Y + L ++ + + FTF S+L AC+ L ++ GK IH
Sbjct: 527 SVNSGIRALIQKGEYLQALHLYTKHDGSSPLWTSVFTFPSLLKACSSLTNLSSGKTIHGS 586
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH-----RNVVSWNTIIAAHANHR 383
+I + D + +LVNMY KCG + + ++F+ R+V N++I + R
Sbjct: 587 IIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGYFKFR 646
Query: 384 LGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI----SPD 439
+ F +M G++PD+ + +++ L KEG ++ +G S D
Sbjct: 647 RFKEGVGCFRRMLVLGVRPDAFSLSIVVSV-----LCKEGNFRREDGKQIHGYMLRNSLD 701
Query: 440 IEHF--TCLIDLLGRAG 454
+ F T LID+ + G
Sbjct: 702 GDSFLKTALIDMYFKFG 718
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 169/447 (37%), Positives = 251/447 (56%), Gaps = 36/447 (8%)
Query: 154 ALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSV 213
A LV+ + P + N++I G+ P + ++LM+ QGL PDRF+F + C V
Sbjct: 31 ARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGV 90
Query: 214 SNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTF 273
L +G LHC + K S+ ++ NT+M +YS + A K F + K ++SW T
Sbjct: 91 ---LCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATM 147
Query: 274 IAACSH---------------------C-----------ADYEKGLSVFKEMSNDHGVRP 301
I A + C +DYE+ LS+F EM GV+
Sbjct: 148 IGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLS-GVKG 206
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D T AS+L AC L +++ GK +H ++ + ++ DV +G ALV+MYAKCG I + ++F
Sbjct: 207 DKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVF 266
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
EM ++V++W +I A G AL+LF +M+ + +KPD++TF+G+L AC+HAGLV
Sbjct: 267 QEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVN 326
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
EG AYFNSM YGI P IEH+ C++D+LGRAG++ EAE+ + P+ D VL LLSA
Sbjct: 327 EGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSA 386
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
CR+ ++V+ ER A+QL L P YVLLSN+Y+S W R+++ + +KK P
Sbjct: 387 CRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPP 446
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEI 568
S IEV G +F + SH + EI
Sbjct: 447 GCSAIEVGGVVHEFVKGDVSHPQSSEI 473
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 168/401 (41%), Gaps = 73/401 (18%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SL C L +G LH K+G D + N ++N+Y+ CG ++ ARKVFD+M
Sbjct: 80 TFPSLFKSCG---VLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKM 136
Query: 64 SERNLVSWSA--------------------------------MISGHHQAGEHLLALEFF 91
+++VSW+ MI+GH + ++ AL F
Sbjct: 137 VNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLF 196
Query: 92 SQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKV 148
++M L ++ AS + AC + +L G+ +H Y K +G +L+ MY K
Sbjct: 197 NEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKC 256
Query: 149 GYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGL 208
G A+ V+ E E +++++ ALI G Q K E+F M + PD +F G L
Sbjct: 257 GSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVL 316
Query: 209 EICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLI 268
CS + + +G I + ++ K P +I +++G +A R+ E +DLI
Sbjct: 317 AACSHAGLVNEG-IAYFNSMPNKYGIQP----SIEHYGCMVDMLG---RAGRIAEAEDLI 368
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
+ + PD F +L+AC ++ ++
Sbjct: 369 --------------------------QNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQ 402
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
LI + ++ G L N+Y+ + K+ M+ RN+
Sbjct: 403 LIELD-PKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNI 442
>gi|57899214|dbj|BAD87363.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|222619954|gb|EEE56086.1| hypothetical protein OsJ_04925 [Oryza sativa Japonica Group]
Length = 566
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 182/530 (34%), Positives = 296/530 (55%), Gaps = 6/530 (1%)
Query: 25 HAAVLKMGIQPDVIVSNH-VLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
HAA K+G +N +L Y + ++ A+ +FD+M R V+W+ +I GH Q+
Sbjct: 34 HAAATKLGFSASNPFANTALLAFYCRSRRLREAQHLFDQMPLRTAVTWNTLIYGHAQSTA 93
Query: 84 HLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
LA+ F++M + P +S + AC +++ G +H+ L+ G+ + VG +
Sbjct: 94 PDLAVAAFARMVRAGVSPTASSVSSVLVACVRLENAGAGAMLHSVGLRCGFFASVVVGTA 153
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
L+ MY K A V+GE E N+ +F AL+ GFV +++P + + M R G+ P+
Sbjct: 154 LVDMYAKCRRLGAAQQVFGEMEEKNVATFTALVTGFVLSRRPHDAVLLVREMERSGVAPN 213
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+++ L + D+ G +HC +K LE +PFV + ++ +YSK + + K
Sbjct: 214 LMTYSSLLSSFASPEDIDHGKQVHCAVLKKGLEHDPFVLSALVTMYSKCGIWEDFVKVQM 273
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ +D +S+N+ I+ S ++ F EM HG D FTFASIL A +S+
Sbjct: 274 SVSCQDQVSFNSVISGLSCLGRGKEAFQHFLEMRR-HGTDMDVFTFASILKAIGSSSSLL 332
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G+Q+H ++++ + V V N+L++MYA+ G I S +F M N+VSWN++++ A
Sbjct: 333 EGRQVHTLILKIGYDSVVDVQNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCA 392
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSM-EKTYGISPD 439
H G +++FEQM+ ++PD +TF+ +LTAC+H GLV +G YFN M +K Y +
Sbjct: 393 QHGHGKEVVEMFEQMRRLHVQPDHITFLSVLTACSHVGLVDKGLEYFNLMKDKGYLVGAR 452
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLF 499
+H+ C++DLLGRAG L EAE P+ V LLSAC++ ++ I R++K+L
Sbjct: 453 TKHYACMVDLLGRAGYLNEAEYLINGMPIKPGASVYRALLSACQIHGNLEIAIRVSKRLM 512
Query: 500 HLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQ 549
L P +S +V LSN +A DG WG+ A R+ + G+ KEPS+S IE Q
Sbjct: 513 ELNPHDSSVHVQLSNAFAGDGRWGNAAEIRETMSGKGIVKEPSWSRIEDQ 562
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 179/324 (55%), Gaps = 4/324 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A S+SS+L C + + G LH+ L+ G V+V ++++YAKC ++ A++VF
Sbjct: 113 ASSVSSVLVACVRLENAGAGAMLHSVGLRCGFFASVVVGTALVDMYAKCRRLGAAQQVFG 172
Query: 62 EMSERNLVSWSAMISG---HHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVK 118
EM E+N+ +++A+++G + + +L + + + PN ++S +S+ A + +
Sbjct: 173 EMEEKNVATFTALVTGFVLSRRPHDAVLLVREMERSGVAPNLMTYSSLLSSFASPEDIDH 232
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+Q+H LK G FV ++L++MY K G D + V + VSFN++I+G
Sbjct: 233 GKQVHCAVLKKGLEHDPFVLSALVTMYSKCGIWEDFVKVQMSVSCQDQVSFNSVISGLSC 292
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ ++ F+ F M R G D F+FA L+ S+ L +G +H L +K +S V
Sbjct: 293 LGRGKEAFQHFLEMRRHGTDMDVFTFASILKAIGSSSSLLEGRQVHTLILKIGYDSVVDV 352
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N+++++Y++ IGE+ F +E +L+SWN+ ++ C+ ++ + +F++M H
Sbjct: 353 QNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGHGKEVVEMFEQMRRLH- 411
Query: 299 VRPDDFTFASILAACAGLASVQHG 322
V+PD TF S+L AC+ + V G
Sbjct: 412 VQPDHITFLSVLTACSHVGLVDKG 435
>gi|147765322|emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
Length = 625
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 183/584 (31%), Positives = 317/584 (54%), Gaps = 16/584 (2%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
LH K+L+ H+ +L +G+ + ++ ++ YA C +R VFD + +N+
Sbjct: 30 LHFSVTHKSLKLTRQSHSRILSLGLSQNSFLATKLIFAYAICQHPYHSRLVFDSLQHKNV 89
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAY 125
W+++I+G + + A + F+QM +LP+++ ++ + + +L G+ IH
Sbjct: 90 FLWNSLINGCVKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGK 149
Query: 126 SLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ---P 182
S++ G+ S + V NS++SMY K G ++ V+ E N S+N LIAG+ +
Sbjct: 150 SIRTGFVSDTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFR 209
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRK---GMILHCLTVKCKL----ESN 235
E+ +E K M + PD ++ + L +C D+ K G LHC VK +L +S+
Sbjct: 210 EETWEFVKQMQMDEVRPDAYTISSLLPLCD--GDMGKWDYGRELHCYIVKNELVLGLDSD 267
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
+G ++ +YS+ N + + F ++ +++ SW I D ++ LS+F++M
Sbjct: 268 VHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQV 327
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
GV P+ + S+L AC+ + + G+QIH +R LN +V + NAL++MY+KCG +
Sbjct: 328 IDGVEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLD 387
Query: 356 CSYKLF-NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ ++F ++ L ++ +SW+++I+ + H G A+ L+++M GI+PD +T +G+L+AC
Sbjct: 388 SARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSAC 447
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
+GLV EG ++S+ YGI P +E C++D+LGRAG+L A ++ K P+ P V
Sbjct: 448 GRSGLVNEGLNIYSSVINDYGIEPTLEICACIVDMLGRAGQLDRALDFIKAIPVEPGPSV 507
Query: 475 LGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKD 534
G L+S + D+ + E + L L+P S YV +SNLYAS W VA R+M+KD
Sbjct: 508 WGALVSCSIIHGDLEMQELAYRFLIQLEPKNPSNYVSISNLYASSRRWDAVAEVRRMMKD 567
Query: 535 SGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSLA 578
L+K P S I + F VA+ +H I ML L L
Sbjct: 568 KRLRKVPGCSWISINNKTHCFYVADKAHPSSTSIYNMLDDLLLT 611
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 175/347 (50%), Gaps = 28/347 (8%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++S+L S+ AL G S+H ++ G D +V+N ++++Y KCG +RKVFDEM
Sbjct: 126 TLSTLSKVSSELGALFSGKSIHGKSIRTGFVSDTVVANSIMSMYCKCGNFDESRKVFDEM 185
Query: 64 SERNLVSWSAMISGHHQAGE---HLLALEFFSQMHL---LPNEYIFASAISACAG-IQSL 116
+ RN SW+ +I+G+ +G EF QM + P+ Y +S + C G +
Sbjct: 186 TIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDMGKW 245
Query: 117 VKGQQIHAYSLK----FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE----PNLVS 168
G+++H Y +K G S +G LI MY + S+ ++V F+ N+ S
Sbjct: 246 DYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSR----SNKVVVGRRVFDRMKCRNVFS 301
Query: 169 FNALIAGFVENQQPEKGFEVFKLM-LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLT 227
+ A+I G+VEN ++ +F+ M + G+ P+R S L CS + L G +H
Sbjct: 302 WTAMINGYVENGDSDEALSLFRDMQVIDGVEPNRVSLVSVLPACSSFSGLLSGRQIHGFA 361
Query: 228 VKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE----KDLISWNTFIAACSHCADY 283
V+ +L + + N ++ +YSK G + A R+ E+ KD ISW++ I+
Sbjct: 362 VRKELNNEVSLCNALIDMYSK---CGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKG 418
Query: 284 EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
++ + ++ +M G+RPD T IL+AC V G I++ +I
Sbjct: 419 QEAILLYDKMLQ-AGIRPDMITTVGILSACGRSGLVNEGLNIYSSVI 464
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 211/702 (30%), Positives = 328/702 (46%), Gaps = 129/702 (18%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQP-------------------------- 35
A++ SLL S + QG LHA ++K G
Sbjct: 21 AQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVK 80
Query: 36 -----DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE------- 83
D++VSN +++ Y + G ++ AR +FDEM ERN VSWSA+ISG + G
Sbjct: 81 EFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWY 140
Query: 84 ------------------------HLLALEFFSQM---HLLPNEYIFASAISACAGIQSL 116
+ AL+ F ++ + PN+ F S + AC +
Sbjct: 141 FERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDF 200
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISM-------------------------------Y 145
G I +K G+ V NSLI++ Y
Sbjct: 201 GLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAY 260
Query: 146 MKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA 205
++ G +A ++ E E N +S++A+IA + ++ E+ ++F M+++G P+ FA
Sbjct: 261 VETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFA 320
Query: 206 GGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK 265
L + L G+ +H K ++ + F+G++++ LY K + F LI EK
Sbjct: 321 CTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEK 380
Query: 266 DLISWN-------------------------------TFIAACSHCADYEKGLSVFKEMS 294
+++ WN T JA EK L VF +
Sbjct: 381 NVVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLL 440
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
G P+ TF+S+L ACA +AS+ G +H +I++ + D+ VG AL +MYAKCG I
Sbjct: 441 VS-GQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDI 499
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG-IKPDSVTFIGLLTA 413
S ++F M +N +SW +I A +L LFE+M+ T + P+ + + +L A
Sbjct: 500 GSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFA 559
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C+H GLV +G YFNSMEK YGI P +H+TC++DLL R+G+L EAEE+ + P +
Sbjct: 560 CSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEAN 619
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
LLS C+ +D I ER AK+L+ L ++ YVLLSN+YAS G W DV+ RK+++
Sbjct: 620 AWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMR 679
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ GLKK S +EV+ F + SHS+ EI L+ L
Sbjct: 680 EKGLKKSGGCSWVEVRNQVHSFYSEDGSHSQSDEIYGTLQLL 721
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 157/524 (29%), Positives = 291/524 (55%), Gaps = 4/524 (0%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACA 111
A VF ++++W++M+ + AL+ +++M +P+ + F S + CA
Sbjct: 31 AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90
Query: 112 GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNA 171
+ G+ +H +K+ S ++ +L++MY G A ++ N V + +
Sbjct: 91 LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150
Query: 172 LIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK 231
+I+G+++N P + ++K M G PD + A + C+ DL GM LH +
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210
Query: 232 LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK 291
++ +G+ ++ +Y+K + A + F + +KD+ +W+ I + L +F+
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFR 270
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
E++ +RP++ T ++++ACA L ++ G+ +H ++ R + V + N+L++M++KC
Sbjct: 271 EVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKC 330
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
G I + ++F+ M +++++SWN+++ A H LG AL F M+ T ++PD +TFIG+L
Sbjct: 331 GDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVL 390
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQD 471
TAC+HAGLV+EG+ F +E YG+ EH+ C++DLL RAG L EA E+ + PL D
Sbjct: 391 TACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPD 450
Query: 472 PIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKM 531
+ G++L ACR+ ++ +GE A+ L L+PT Y+LLSN+YA MW +V R++
Sbjct: 451 GAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVREL 510
Query: 532 LKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ + G++K P S + + F + SH +I EI+ ML+ +
Sbjct: 511 MNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQV 554
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 206/408 (50%), Gaps = 18/408 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SLL C+ + G LH V+K + D+ + +LN+YA CG + AR +F+ M
Sbjct: 81 TFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERM 140
Query: 64 SERNLVSWSAMISGH---HQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
RN V W++MISG+ H E LL + + P+E A+ +SACA ++ L G
Sbjct: 141 GHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGM 200
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H++ + + +G++L++MY K G A V+ + + ++ +++ALI G+V+N
Sbjct: 201 KLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNN 260
Query: 181 QPEKGFEVFKLML-RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ + ++F+ + + P+ + + C+ DL G +H + + + +
Sbjct: 261 RSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLN 320
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N+++ ++SK I A++ F + KDLISWN+ + + + L+ F M +
Sbjct: 321 NSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTT-DL 379
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHL-----IRMRLNQDVGVGNALVNMYAKCGLI 354
+PD+ TF +L AC+ VQ GK++ + +R++ ++ G +V++ + GL+
Sbjct: 380 QPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLK-SEHYG---CMVDLLCRAGLL 435
Query: 355 SCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSALKLFEQMKAT 398
+ + + M L + W +++ A + N LG A + +++ T
Sbjct: 436 AEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPT 483
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%)
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+G A F D+++WN+ + A + + L + EM PD FTF S+L
Sbjct: 28 VGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLK 87
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
CA L + GK +H +++ L+ D+ + L+NMYA CG + + LF M HRN V
Sbjct: 88 GCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVV 147
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
W ++I+ + + AL L+++M+ G PD VT L++AC
Sbjct: 148 WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSAC 190
>gi|302781981|ref|XP_002972764.1| hypothetical protein SELMODRAFT_173093 [Selaginella moellendorffii]
gi|300159365|gb|EFJ25985.1| hypothetical protein SELMODRAFT_173093 [Selaginella moellendorffii]
Length = 535
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 170/522 (32%), Positives = 289/522 (55%), Gaps = 14/522 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++LL C + +AL G +LHA + P + +SNH+L +YAKCG A FD M
Sbjct: 15 TYATLLQQCGERRALGDGKALHAHIASRLPNPPLFLSNHLLGMYAKCGSARDALAAFDSM 74
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK-G 119
+RN+VSW+ +++ AG AL F +M + PN+ F + + AC+ + L+ G
Sbjct: 75 RDRNVVSWTTIVTAFAHAGHPTAALRLFQRMLAEGIAPNKVTFVAVLHACSDSRELLDPG 134
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ IH + G V SL +MY K G A + E F+P++++++A+I GF +
Sbjct: 135 RMIHRCCEESGLTRDRSVAISLANMYGKCGDVDTAASMLDEMFQPDVIAWSAVITGFAQQ 194
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ +F+ M +G++ ++ + L C+ S+ L G LH L + KLES+ VG
Sbjct: 195 GRSSDALHLFRRMQHEGVIANKITLVATLSACTNSSALADGKFLHSLIAEKKLESDVIVG 254
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK----EMSN 295
++ +Y+ + +A AF + ++I+W I+AC H + ++ L +F+ + +
Sbjct: 255 GALVTMYTNCGSLDDARLAFGAVRRPNVIAWTAMISACVHFGELDEALQIFRLIEAQCLD 314
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLI 354
D + D F ++ ACA L + G+++HA + + DV +GNALVNMY+KCG +
Sbjct: 315 DRELLLDGIVFVPLINACARLTDLSQGRRLHARISSDESIKVDVQLGNALVNMYSKCGSV 374
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ ++F+ M +R+ VSWNT+I+A+A L +F +M+ G++PD V+F+G+L+AC
Sbjct: 375 EEAARVFDGMKYRSTVSWNTMISAYAVAGHSDKVLWMFHRMQQDGVEPDEVSFVGVLSAC 434
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
N AG V+EG YF + Y I + +HF CLIDLLGR G L EAE ++ +P V
Sbjct: 435 NAAGTVEEGCKYFGLCCEDYRILLEPQHFGCLIDLLGRVGYLDEAERLLRRM---TEPDV 491
Query: 475 LG--TLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSN 514
+ +L ACR+ D+ + A+++ L P ++ Y++ +
Sbjct: 492 MAWMMMLDACRVHNDLTRAKAAAERVLELDPGNSAAYIMYTQ 533
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 86/156 (55%), Gaps = 2/156 (1%)
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D T+A++L C ++ GK +HAH+ N + + N L+ MYAKCG + F
Sbjct: 12 DIHTYATLLQQCGERRALGDGKALHAHIASRLPNPPLFLSNHLLGMYAKCGSARDALAAF 71
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG-LV 420
+ M RNVVSW TI+ A A+ +AL+LF++M A GI P+ VTF+ +L AC+ + L+
Sbjct: 72 DSMRDRNVVSWTTIVTAFAHAGHPTAALRLFQRMLAEGIAPNKVTFVAVLHACSDSRELL 131
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
G E++ G++ D L ++ G+ G +
Sbjct: 132 DPGRMIHRCCEES-GLTRDRSVAISLANMYGKCGDV 166
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 203/690 (29%), Positives = 327/690 (47%), Gaps = 113/690 (16%)
Query: 1 MAKSISSLLHHCSKTKALQQGI--SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARK 58
+A ++ L C + I ++HA ++ G +P + N ++++Y K ++ A
Sbjct: 12 LANQYAAQLQQCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHH 71
Query: 59 VFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---------------------- 96
+FDE+ + ++V+ + +I+ H AG LA E F L
Sbjct: 72 LFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGF 131
Query: 97 --------------LPNEYIFASAISACAGI-QSLVKGQQIHAYSLKFGYASISFVGNSL 141
P+ + F S + A A I + + QQIH +K G ++ V N+L
Sbjct: 132 GAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNAL 191
Query: 142 ISMYMK-----------------------------------VGYSSDALLVYGEAF---- 162
+S+++K GY + L F
Sbjct: 192 LSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGM 251
Query: 163 -EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
E +V++NA+I+G+V + + E+F+ M G+ D F++ L C+ + G
Sbjct: 252 TEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGK 311
Query: 222 ILHCLTVKCK----LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC 277
+H ++ + L+ + V N + LY K + EA + F + KDL+SWN ++
Sbjct: 312 QVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGY 371
Query: 278 SHCADYEKGLSVFKEMSN------------------------------DHGVRPDDFTFA 307
+ ++ S F+EM G P D+ FA
Sbjct: 372 VNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFA 431
Query: 308 SILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR 367
+ ACA LA++ HG+Q+HA L+R+ + + GNAL+ MYAKCG++ ++ LF M +
Sbjct: 432 GAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYL 491
Query: 368 NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYF 427
+ VSWN +IAA H G AL+LFE M I PD +TF+ +L+ C+HAGLV+EG YF
Sbjct: 492 DSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYF 551
Query: 428 NSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRD 487
SM YGI P +H+ +IDLL RAGK EA++ + P+ P + LL+ CR+ +
Sbjct: 552 KSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGN 611
Query: 488 VVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIE 547
+ +G + A++LF L P YVLLSN+YA+ G W DVA RK+++D G+KKEP S IE
Sbjct: 612 MDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIE 671
Query: 548 VQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
V+ F V + H ++ + L+ L L
Sbjct: 672 VENKVHVFLVDDIVHPEVQAVYNYLEELGL 701
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 74/186 (39%), Gaps = 47/186 (25%)
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQH--GKQIHAHLIRMRLNQDVGVGNALVNMYA 349
+M N VR +A+ L C + + + +HAH+I + N L+++Y
Sbjct: 2 DMRNAANVRRLANQYAAQLQQCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYC 61
Query: 350 KCGLISCSYKLFNEMLHRNVVSWNTIIAAHA---NHRL---------------------- 384
K + ++ LF+E+ ++V+ T+IAAH+ N L
Sbjct: 62 KSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMI 121
Query: 385 --------GGSALKLFEQMKATGIKPDSVTFIGLLTA----------CN--HAGLVKEGE 424
G A++LF + G +PD+ TF +L A C H +VK G
Sbjct: 122 TGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGS 181
Query: 425 AYFNSM 430
+ S+
Sbjct: 182 GFVTSV 187
>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g25970
gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 701
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 196/589 (33%), Positives = 316/589 (53%), Gaps = 25/589 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S S LL + K G +H V+K G + +V V + ++++YAKC ++ A + F E+
Sbjct: 103 SFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEI 162
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAG----IQSLVKG 119
SE N VSW+A+I+G Q + A M + +A++ AG + +L+
Sbjct: 163 SEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEM-------KAAVTMDAGTFAPLLTLLDD 215
Query: 120 -------QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY-GEAFEPNLVSFNA 171
+Q+HA LK G + N++IS Y G SDA V+ G +L+S+N+
Sbjct: 216 PMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNS 275
Query: 172 LIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK 231
+IAGF +++ E FE+F M R + D +++ G L CS G LH + +K
Sbjct: 276 MIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKG 335
Query: 232 LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE---KDLISWNTFIAACSHCADYEKGLS 288
LE N ++++Y +F G E A L E KDLISWN+ I + E +
Sbjct: 336 LEQVTSATNALISMYIQFP-TGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVK 394
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMY 348
F + + ++ DD+ F+++L +C+ LA++Q G+QIHA + + V ++L+ MY
Sbjct: 395 FFSYLRSSE-IKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMY 453
Query: 349 AKCGLISCSYKLFNEMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTF 407
+KCG+I + K F ++ + + V+WN +I +A H LG +L LF QM +K D VTF
Sbjct: 454 SKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTF 513
Query: 408 IGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+LTAC+H GL++EG N ME Y I P +EH+ +DLLGRAG + +A+E + P
Sbjct: 514 TAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMP 573
Query: 468 LGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAG 527
L DP+VL T L CR ++ + ++A L ++P YV LS++Y+ W + A
Sbjct: 574 LNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKAS 633
Query: 528 ARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
+KM+K+ G+KK P +S IE++ + F + S+ +I M+K L+
Sbjct: 634 VKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLT 682
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/416 (31%), Positives = 215/416 (51%), Gaps = 15/416 (3%)
Query: 20 QGISL-HAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGH 78
Q +SL H +K G D+ VSN +L+ Y K G + A +FDEM +R+ VSW+ MISG+
Sbjct: 17 QKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGY 76
Query: 79 HQAGEHLLALEFFSQMHLLPNE---YIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS 135
G+ A F+ M ++ Y F+ + A ++ G+Q+H +K GY
Sbjct: 77 TSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNV 136
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM-LR 194
+VG+SL+ MY K DA + E EPN VS+NALIAGFV+ + + F + LM ++
Sbjct: 137 YVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMK 196
Query: 195 QGLLPDRFSFAGGLEICS---VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
+ D +FA L + N L++ +H +K L+ + N +++ Y+
Sbjct: 197 AAVTMDAGTFAPLLTLLDDPMFCNLLKQ---VHAKVLKLGLQHEITICNAMISSYADCGS 253
Query: 252 IGEAEKAFR-LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
+ +A++ F L KDLISWN+ IA S E +F +M H V D +T+ +L
Sbjct: 254 VSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQR-HWVETDIYTYTGLL 312
Query: 311 AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK--CGLISCSYKLFNEMLHRN 368
+AC+G GK +H +I+ L Q NAL++MY + G + + LF + ++
Sbjct: 313 SACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKD 372
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
++SWN+II A L A+K F ++++ IK D F LL +C+ ++ G+
Sbjct: 373 LISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQ 428
>gi|147812109|emb|CAN61522.1| hypothetical protein VITISV_010801 [Vitis vinifera]
Length = 674
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 184/570 (32%), Positives = 300/570 (52%), Gaps = 8/570 (1%)
Query: 13 SKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWS 72
+K L G LHA V+K+G + + N VL++Y KC + K+FDEM +N+VSW+
Sbjct: 84 AKLGFLHGGKQLHAHVIKLGXCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNVVSWN 143
Query: 73 AMISGHHQAGEHL----LALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAY 125
+I G + L F QM L PN + A + + +Q+H +
Sbjct: 144 TLICGVVEGNCKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQLHCF 203
Query: 126 SLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKG 185
LK G+ S FVG++L+ Y K G +A + E +LV +N +++ + N K
Sbjct: 204 ILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKA 263
Query: 186 FEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMAL 245
F VFKLM +G+ D F+F + C V G +H L ++ + + V + ++ +
Sbjct: 264 FGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVDM 323
Query: 246 YSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFT 305
YSK I +A KAF + K+++SW T D ++ + + +EM + PD+
Sbjct: 324 YSKNENIEDARKAFDGMJVKNIVSWTTMXVGYGQHGDGKEXMRLLQEMIRVY-TYPDELA 382
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
ASIL++C L++ Q+HA+++ + + NALV+ Y+KCG I +++ F+ +
Sbjct: 383 LASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVA 442
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
+++SW +++ A+A H L + +FE++ ++ ++PD V F+G+L+AC H G V EG
Sbjct: 443 EPDIISWTSLMGAYAFHGLSKQGVDVFEKILSSNVRPDKVAFLGVLSACAHGGFVLEGLH 502
Query: 426 YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLR 485
YFN M Y I PD EH+T +IDLLGRAG L EA P+ LG L AC++
Sbjct: 503 YFNLMINVYQIMPDSEHYTSIIDLLGRAGFLDEAVNLLTSMPVEPRSDTLGAFLGACKVY 562
Query: 486 RDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSM 545
R+V + +++LF ++P Y L+SN+YAS G W DVA RK++++ K P S
Sbjct: 563 RNVGLARWASEKLFVMEPNEPGKYSLMSNMYASVGHWFDVARVRKLMRERCDFKVPGCSW 622
Query: 546 IEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+E G F + +H + ++ ML L
Sbjct: 623 METAGEVHTFVSRDKTHPRAVQVYGMLDLL 652
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 118/212 (55%), Gaps = 3/212 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+++ C + G +H ++++ DV+V++ ++++Y+K + ARK FD M
Sbjct: 281 TFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGM 340
Query: 64 SERNLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
+N+VSW+ M G+ Q G E + L+ +++ P+E AS +S+C + + +
Sbjct: 341 JVKNIVSWTTMXVGYGQHGDGKEXMRLLQEMIRVYTYPDELALASILSSCGNLSATSEVV 400
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HAY ++ G+ + + N+L+S Y K G A + EP+++S+ +L+ + +
Sbjct: 401 QVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHG 460
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
++G +VF+ +L + PD+ +F G L C+
Sbjct: 461 LSKQGVDVFEKILSSNVRPDKVAFLGVLSACA 492
>gi|357129835|ref|XP_003566566.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g05340-like [Brachypodium distachyon]
Length = 614
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 187/569 (32%), Positives = 301/569 (52%), Gaps = 18/569 (3%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLK-------MGIQPDV----IVSNHVLNLYAKCGKM 53
+S LL C + + G +LH ++K ++P + + N ++++YA+CG+
Sbjct: 12 LSGLLSRCGRAADHRLGAALHVTIVKNPSHFLLCPLRPSLRHVLVAWNALVSMYARCGRH 71
Query: 54 ILARKVFDEMSERNLVSWSAMI--SGHHQA---GEHLLALEFFSQMHLLPNEYIFASAIS 108
A +VFDEM R+ VSW+++I SG A +L + + F + +S
Sbjct: 72 AEAARVFDEMRIRDSVSWNSLIGSSGAEDALSQFRRMLRSSSSPGGGVSCDHATFTTVLS 131
Query: 109 ACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVS 168
ACA SL +H + G+ + VGN+L++ Y + A + E N+++
Sbjct: 132 ACAREASLPTCAMVHGLVVSRGFEAEVSVGNALVTAYFECESPGSAERAFHGMAERNVIT 191
Query: 169 FNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV 228
+ A+I+G + + +F+ M R+ + + +++ L C+ S L++G +H L V
Sbjct: 192 WTAMISGMAREELYKDSIVLFQQM-RRTVDANSATYSSSLLACAGSLALKEGQQIHGLVV 250
Query: 229 KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLS 288
K LE++ V + +M LYSK L+ + FRL + D IS + + EK
Sbjct: 251 KAGLETDLHVESGLMDLYSKCGLMEDTLSVFRLCRQPDEISLTVILVGFAQNGLEEKAFE 310
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMY 348
+F EM+ + G+ D +++L A A GKQIHA +I+ +++ V N L+NMY
Sbjct: 311 LFAEMAGE-GILIDTNMVSAVLGAFGASAPFALGKQIHALVIKKCFGRNIYVCNGLINMY 369
Query: 349 AKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
+KCG + S ++FNE +N +SWN+IIAA A H G KLFE MKA G P VTF+
Sbjct: 370 SKCGELEESIQVFNETPSKNSISWNSIIAAFARHGQGSEVFKLFESMKADGANPTDVTFL 429
Query: 409 GLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
LL C+H G K+G NSM YGI P +EH+ C++D+LGRAG L +A + + P
Sbjct: 430 SLLHGCSHVGSAKKGLEILNSMSSEYGILPRVEHYACVVDMLGRAGLLEDARSFIEDGPF 489
Query: 469 GQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGA 528
++ L+ AC R + IG+ A++L HL P + + YVLLSN+Y+S+G W D A
Sbjct: 490 KDSALLWQALMGACSFRGNSEIGKYAAEKLLHLDPDSPAAYVLLSNIYSSEGRWDDRARV 549
Query: 529 RKMLKDSGLKKEPSYSMIEVQGTFEKFTV 557
K +++ GL+K+ S IE++ F V
Sbjct: 550 MKSMREMGLRKDTGKSWIELEKEVHSFVV 578
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 165/324 (50%), Gaps = 3/324 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +++L C++ +L +H V+ G + +V V N ++ Y +C A + F M
Sbjct: 125 TFTTVLSACAREASLPTCAMVHGLVVSRGFEAEVSVGNALVTAYFECESPGSAERAFHGM 184
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH--LLPNEYIFASAISACAGIQSLVKGQQ 121
+ERN+++W+AMISG + + ++ F QM + N ++S++ ACAG +L +GQQ
Sbjct: 185 AERNVITWTAMISGMAREELYKDSIVLFQQMRRTVDANSATYSSSLLACAGSLALKEGQQ 244
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
IH +K G + V + L+ +Y K G D L V+ +P+ +S ++ GF +N
Sbjct: 245 IHGLVVKAGLETDLHVESGLMDLYSKCGLMEDTLSVFRLCRQPDEISLTVILVGFAQNGL 304
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
EK FE+F M +G+L D + L S G +H L +K N +V N
Sbjct: 305 EEKAFELFAEMAGEGILIDTNMVSAVLGAFGASAPFALGKQIHALVIKKCFGRNIYVCNG 364
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +YSK + E+ + F K+ ISWN+ IAA + + +F+ M D G P
Sbjct: 365 LINMYSKCGELEESIQVFNETPSKNSISWNSIIAAFARHGQGSEVFKLFESMKAD-GANP 423
Query: 302 DDFTFASILAACAGLASVQHGKQI 325
D TF S+L C+ + S + G +I
Sbjct: 424 TDVTFLSLLHGCSHVGSAKKGLEI 447
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 166/471 (35%), Positives = 261/471 (55%), Gaps = 2/471 (0%)
Query: 105 SAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEP 164
S + ACA + G+ +H +K + N+L+ MY K G A+LV+
Sbjct: 3 SILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVR 62
Query: 165 NLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILH 224
+V++ +LIA + ++ +F M R+G+ PD F+ L C+ + L G +H
Sbjct: 63 TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVH 122
Query: 225 CLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYE 284
+ ++SN FV N +M +Y+K + +A F + KD+ISWNT I S +
Sbjct: 123 NYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPN 182
Query: 285 KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNAL 344
+ LS+F +M + ++PD T A IL ACA LAS+ GK++H H++R D V NAL
Sbjct: 183 EALSLFGDMVLE--MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANAL 240
Query: 345 VNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDS 404
V+MY KCG+ + LF+ + +++++W +IA + H G +A+ F +M+ GI+PD
Sbjct: 241 VDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDE 300
Query: 405 VTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTK 464
V+FI +L AC+H+GL+ EG +FN M+ + P +EH+ C++DLL R+GKL A ++ K
Sbjct: 301 VSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIK 360
Query: 465 KFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGD 524
P+ D + G LLS CR+ DV + E++A+ +F L+P T YVLL+N YA W +
Sbjct: 361 SMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEE 420
Query: 525 VAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
V R+ + GLKK P S IEV+ F SH + +I +LK L
Sbjct: 421 VKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRL 471
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 199/411 (48%), Gaps = 11/411 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C+ + G ++H + +K + N +L++YAKCG + A VFD MS R
Sbjct: 3 SILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVR 62
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
+V+W+++I+ + + G A+ F +M + P+ + + + ACA SL G+ +H
Sbjct: 63 TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVH 122
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
Y + S FV N+L+ MY K G DA V+ E +++S+N +I G+ +N P
Sbjct: 123 NYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPN 182
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ +F M+ + + PD + A L C+ L +G +H ++ S+ V N ++
Sbjct: 183 EALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALV 241
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y K + A F +I KDLI+W IA ++ F EM G+ PD+
Sbjct: 242 DMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQ-AGIEPDE 300
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN--ALVNMYAKCGLISCSYKLF 361
+F SIL AC+ + G + ++++ N + + +V++ A+ G ++ +YK
Sbjct: 301 VSFISILYACSHSGLLDEGWRFF-NVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFI 359
Query: 362 NEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
M + + W +++ H A K+ E + ++P++ + LL
Sbjct: 360 KSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFE--LEPENTGYYVLL 408
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 142/281 (50%), Gaps = 10/281 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I+++LH C+ +L+ G +H + + +Q ++ V N ++++YAKCG M A VF EM
Sbjct: 101 TITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEM 160
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM--HLLPNEYIFASAISACAGIQSLVKGQQ 121
++++SW+ MI G+ + AL F M + P+ A + ACA + SL +G++
Sbjct: 161 PVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLEMKPDGTTLACILPACASLASLDRGKE 220
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H + L+ G+ S V N+L+ MY+K G A L++ +L+++ +IAG+ +
Sbjct: 221 VHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGF 280
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVGN 240
F M + G+ PD SF L CS S L +G + + +C ++
Sbjct: 281 GNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYA 340
Query: 241 TIMALYSKFNLIGEAEKAFRLIE----EKDLISWNTFIAAC 277
I+ L ++ G+ A++ I+ E D W ++ C
Sbjct: 341 CIVDLLARS---GKLAMAYKFIKSMPIEPDATIWGALLSGC 378
>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 184/578 (31%), Positives = 325/578 (56%), Gaps = 5/578 (0%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ ++S++L C L+ G +H+ VLK G +V SN ++ +Y+ G+ A VF
Sbjct: 232 STTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQ 291
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVK 118
M E++++SW++M++ + Q G L AL+ + M + N F SA++AC+ + +
Sbjct: 292 GMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATE 351
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ +HA + G VGN+L+++Y K G +A V+ + + V++NALI G +
Sbjct: 352 GKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHAD 411
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDL-RKGMILHCLTVKCKLESNPF 237
+++P++ + FKLM +G+ + + + L C NDL GM +H + +S+ +
Sbjct: 412 SEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEY 471
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N+++ +Y+K + + F + K+ +WN +AA +H E+ L EM
Sbjct: 472 VQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRR-A 530
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
GV D+F+F+ LAA A LA ++ G+Q+H +++ + + V +A ++MY KCG I
Sbjct: 531 GVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDV 590
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++ ++R+ +SWN + ++ + H A + F +M G+KPD VTF+ LL+AC+H
Sbjct: 591 LRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHG 650
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
G+V+EG AY++SM K +GI I H C+IDLLGR+G+ EAE + K+ P+ V +
Sbjct: 651 GMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRS 710
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL+AC+ ++ +G + + L L P+ S YVL SN+ A+ G W DV R+ + + +
Sbjct: 711 LLAACKTHGNLELGRKAVENLLKLDPSDDSAYVLYSNICATTGKWEDVEKIRRQMGLNKI 770
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KK+P+ S ++++ F + + SH + EI L+ L
Sbjct: 771 KKKPACSWVKLKNKLSLFGMGDHSHPQASEIYAKLEEL 808
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 130/418 (31%), Positives = 223/418 (53%), Gaps = 11/418 (2%)
Query: 4 SISSLLHHCSKTK-ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+++SL+ C +++ L +G+ +H ++K+G+ DV V +++LY G A KVF E
Sbjct: 31 AVASLVTACERSEWMLIEGVQVHGFIVKVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQE 90
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
M +N+VSW+A++ + GE + + + +M + N+ +S IS C +++ + G
Sbjct: 91 MIYKNVVSWTALMVAYVDYGEPSMVMNIYRRMRSEGMSCNDNTMSSVISTCVSLENELLG 150
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
Q+ + +K+G + V NSLISM+ G +A V+ E + +S+N++IA ++ N
Sbjct: 151 YQVLGHVIKYGLETNVSVANSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRN 210
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
++ F M R + + + L C ++L+ G +H L +K SN
Sbjct: 211 GLCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCAS 270
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS---HCADYEKGLSVFKEMSND 296
NT++ +YS +AE F+ + EKD+ISWN+ +A + +C D K L+ M
Sbjct: 271 NTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRG 330
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
+ TF S LAAC+ GK +HA +I + L+++V VGNALV +YAK GL+
Sbjct: 331 ----ANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIE 386
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ K+F M R+ V+WN +I HA+ ALK F+ M+ G+ + +T +L AC
Sbjct: 387 AKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGAC 444
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 213/410 (51%), Gaps = 9/410 (2%)
Query: 75 ISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQ-SLVKGQQIHAYSLKFG 130
+SG +AG + ++ FF++M + P+ AS ++AC + L++G Q+H + +K G
Sbjct: 1 MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60
Query: 131 YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFK 190
S FVG SL+ +Y G ++DA+ V+ E N+VS+ AL+ +V+ +P +++
Sbjct: 61 LLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYR 120
Query: 191 LMLRQGLLPDRFSFAGGLEIC-SVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF 249
M +G+ + + + + C S+ N+L +L + +K LE+N V N++++++ F
Sbjct: 121 RMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHV-IKYGLETNVSVANSLISMFGYF 179
Query: 250 NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
+ EA F ++E D ISWN+ IAA ++ L F M H + T +++
Sbjct: 180 GSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHK-EINSTTLSTM 238
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
LA C + +++ G+ IH+ +++ N +V N L+ MY+ G + +F M+ +++
Sbjct: 239 LAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDM 298
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNS 429
+SWN+++A +A ALKL M + VTF L AC+ EG+ ++
Sbjct: 299 ISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKI-LHA 357
Query: 430 MEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
+ G+ ++ L+ L ++G ++EA++ + P +D + L+
Sbjct: 358 LVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMP-KRDGVTWNALI 406
>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
Length = 683
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 176/545 (32%), Positives = 286/545 (52%), Gaps = 5/545 (0%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+S L C ++ G LH +K+G D V N ++++YAK G + ARKVF+ +
Sbjct: 136 LSLALKACIRSADYGYGTRLHCDAVKVG-GADGFVMNSLVDMYAKAGDLECARKVFERIP 194
Query: 65 ERNLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQ 121
RN+VSW++M+SG Q G + LL Q ++ P+EY A+ I+AC+ + L +G+
Sbjct: 195 GRNVVSWTSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTIATVITACSALIGLHQGRW 254
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H +K G S SF+ +L+ MY+K G DA V+ E +LV + +I G+ +N
Sbjct: 255 MHGSVIKQGLMSNSFISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVGYTQNGN 314
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
P +F ++P+ + A L + DL G +H + VK L V N
Sbjct: 315 PLDALRLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLVEYTVVVNA 374
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y+K + EA + F I KD+++WN+ ++ + L +FK+MS G P
Sbjct: 375 LVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSGYAENNMCNDALMLFKQMSL-KGPSP 433
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D + L+A L + GK H + ++ ++ V AL+N+Y KCG + + ++F
Sbjct: 434 DAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLSNIYVSTALLNLYNKCGDLPSARRVF 493
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+EM RN V+W +I + ++ LF +M G+ P+ V F +L+ C+H G+V
Sbjct: 494 DEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDGVHPNDVAFTSILSTCSHTGMVT 553
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+ YF+SM + + I+P ++H+ C++D+L RAG L EA E+ P+ D V G L
Sbjct: 554 AAKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEEALEFIDNMPMQADTSVWGAFLHG 613
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
C L + GE K++ L P YVL+SNLY S+GMW R+ +++ GL K P
Sbjct: 614 CELHSRLQFGEEAIKRMMVLHPERPDLYVLISNLYTSNGMWEKSQAIRRWMQEKGLVKLP 673
Query: 542 SYSMI 546
YS I
Sbjct: 674 GYSSI 678
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 209/437 (47%), Gaps = 13/437 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I++++ CS L QG +H +V+K G+ + +S +L++Y KCG++ A+ VFDE+
Sbjct: 235 TIATVITACSALIGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELEDAQCVFDEL 294
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQ---MHLLPNEYIFASAISACAGIQSLVKGQ 120
S +LV W+ MI G+ Q G L AL F +++PN A+ +SA A ++ L G+
Sbjct: 295 SYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGR 354
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IH ++K G + V N+L+ MY K S+A ++G ++V++N++++G+ EN
Sbjct: 355 SIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSGYAENN 414
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+FK M +G PD S L DL G H VK SN +V
Sbjct: 415 MCNDALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLSNIYVST 474
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ LY+K + A + F + +++ ++W I D + +F EM D GV
Sbjct: 475 ALLNLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKD-GVH 533
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIR-MRLNQDVGVGNALVNMYAKCGLISCSYK 359
P+D F SIL+ C+ V K+ + + + + +V++ A+ G + + +
Sbjct: 534 PNDVAFTSILSTCSHTGMVTAAKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEEALE 593
Query: 360 LFNEM-LHRNVVSWNTIIAA---HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ M + + W + H+ + G A+K M +PD I L N
Sbjct: 594 FIDNMPMQADTSVWGAFLHGCELHSRLQFGEEAIK--RMMVLHPERPDLYVLISNLYTSN 651
Query: 416 HAGLVKEGEAYFNSMEK 432
G+ ++ +A M++
Sbjct: 652 --GMWEKSQAIRRWMQE 666
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 210/427 (49%), Gaps = 13/427 (3%)
Query: 43 VLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL------ 96
+L+ YA G + AR VFD + S+ M+ QA H A+ M
Sbjct: 70 LLSCYAALGDLASARMVFDGTPRPDAYSYGVMLWCLVQAERHAEAVALHQDMRRRRPCPE 129
Query: 97 LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALL 156
++++ + A+ AC G ++H ++K G A FV NSL+ MY K G A
Sbjct: 130 AQDDFVLSLALKACIRSADYGYGTRLHCDAVKVGGAD-GFVMNSLVDMYAKAGDLECARK 188
Query: 157 VYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSND 216
V+ N+VS+ ++++G V+N G +F M + + P ++ A + CS
Sbjct: 189 VFERIPGRNVVSWTSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTIATVITACSALIG 248
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
L +G +H +K L SN F+ ++ +Y K + +A+ F + DL+ W T I
Sbjct: 249 LHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVG 308
Query: 277 CSHCADYEKGLSVF--KEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRL 334
+ + L +F K+ +N + P+ T A++L+A A L + G+ IH +++ L
Sbjct: 309 YTQNGNPLDALRLFLDKKFAN---IVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGL 365
Query: 335 NQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQ 394
+ V NALV+MYAKC +S + ++F + +++VV+WN++++ +A + + AL LF+Q
Sbjct: 366 VEYTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSGYAENNMCNDALMLFKQ 425
Query: 395 MKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
M G PD+++ + L+A G + G++ F+ + +I T L++L + G
Sbjct: 426 MSLKGPSPDAISVVHALSASVCLGDLLIGKS-FHGYAVKHAFLSNIYVSTALLNLYNKCG 484
Query: 455 KLLEAEE 461
L A
Sbjct: 485 DLPSARR 491
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 111/247 (44%), Gaps = 20/247 (8%)
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
+G++L L + KL ++ Y+ + A F D S+ +
Sbjct: 57 QGLLLGSLRARTKL----------LSCYAALGDLASARMVFDGTPRPDAYSYGVMLWCLV 106
Query: 279 HCADYEKGLSVFKEMSNDHGVRP-----DDFTFASILAACAGLASVQHGKQIHAHLIRMR 333
+ + +++ ++M RP DDF + L AC A +G ++H +++
Sbjct: 107 QAERHAEAVALHQDMRRR---RPCPEAQDDFVLSLALKACIRSADYGYGTRLHCDAVKVG 163
Query: 334 LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFE 393
D V N+LV+MYAK G + C+ K+F + RNVVSW ++++ + L LF
Sbjct: 164 -GADGFVMNSLVDMYAKAGDLECARKVFERIPGRNVVSWTSMLSGCVQNGFAADGLLLFN 222
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 453
+M+ + P T ++TAC+ + +G S+ K G+ + L+D+ +
Sbjct: 223 KMRQDNVPPSEYTIATVITACSALIGLHQGRWMHGSVIKQ-GLMSNSFISAALLDMYVKC 281
Query: 454 GKLLEAE 460
G+L +A+
Sbjct: 282 GELEDAQ 288
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 185/577 (32%), Positives = 309/577 (53%), Gaps = 6/577 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ +LL CS + G+ +H +K+G+ +++V N ++++Y+KCG + A +F ++
Sbjct: 315 TMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKI 374
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP-----NEYIFASAISACAGIQSLVK 118
+++VSW++MI + + G + +M + NE + + AC L+
Sbjct: 375 ENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLS 434
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+ +H YSL+ + + N+ I+ Y K G A V+ ++ S+NA+I G +
Sbjct: 435 LRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQ 494
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N P K + + M R G+LPD FS L C L+ G +H ++ LE N FV
Sbjct: 495 NGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFV 554
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++++LY + F + +K+ + WN ++ S + LS+F++M +D G
Sbjct: 555 AVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSD-G 613
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ PD+ ASIL AC+ L+++ GK++H ++ L +D V +L++MYAK G + S
Sbjct: 614 LEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQ 673
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
++FN + + V SWN +I H G A++LFE MK + +PD TF+G+L AC HAG
Sbjct: 674 RIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAG 733
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV EG Y M+ Y + P++EH+ C+ID+LGRAG+L EA + + P D + +L
Sbjct: 734 LVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSL 793
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
LS+ D+ +GE+ A++L L+ Y+LLSNLYA+ G W V R+ +KD L+
Sbjct: 794 LSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQ 853
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
K+ S IE++G F E S+ EI M L
Sbjct: 854 KDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRL 890
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 219/431 (50%), Gaps = 10/431 (2%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAV-LKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+++ LL C + K ++ G L + + D +++ ++ +Y+ CG + +R VFD
Sbjct: 108 EAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFD 167
Query: 62 EMSERNLVSWSAMISGH-----HQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSL 116
+ +NL W+A++SG+ + H LE S P+ + F I AC G +
Sbjct: 168 RLLNKNLFQWNALVSGYVRNELYDEAIHTF-LELISVTEFQPDNFTFPCLIKACTGKCDI 226
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G+ +H ++K G FVGN++I++Y K G+ +A+ ++ + E NL+S+N+LI GF
Sbjct: 227 HLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGF 286
Query: 177 VENQQPEKGFEVFKLMLR--QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
EN + + F+ +L GL+PD + L +CS ++ GM++H + VK L
Sbjct: 287 SENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVH 346
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM- 293
V N ++ +YSK + EA FR IE K ++SWN+ I A S + + ++M
Sbjct: 347 ELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMW 406
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
+ + ++ T ++L AC + + + +H + +R + NA + YAKCG
Sbjct: 407 MEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGS 466
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ + +F M ++V SWN +I HA + AL + +M GI PD + + LL A
Sbjct: 467 LVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLA 526
Query: 414 CNHAGLVKEGE 424
C GL++ G+
Sbjct: 527 CGRLGLLQYGK 537
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 115/229 (50%), Gaps = 4/229 (1%)
Query: 234 SNPFVGNT-IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
S FV NT ++ +YS E+ F + K+L WN ++ Y++ + F E
Sbjct: 140 SGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLE 199
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
+ + +PD+FTF ++ AC G + GK +H ++M L D+ VGNA++ +Y KCG
Sbjct: 200 LISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCG 259
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM--KATGIKPDSVTFIGL 410
+ + +LF++M +N++SWN++I + + A + F + G+ PD T + L
Sbjct: 260 FLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTL 319
Query: 411 LTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
L C+ G V G + M G+ ++ LID+ + G L EA
Sbjct: 320 LPVCSGEGNVDVG-MVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEA 367
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 164/492 (33%), Positives = 284/492 (57%), Gaps = 2/492 (0%)
Query: 85 LLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISM 144
L L+ + L P +++ ++ C ++ L +G+ IHA+ + + N +++M
Sbjct: 90 LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNM 149
Query: 145 YMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSF 204
Y K G +A ++ + ++VS+ LI+G+ ++ Q + +F ML G P+ F+
Sbjct: 150 YAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTL 209
Query: 205 AGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE 264
+ L+ G LH ++K + N VG++++ +Y+++ + EA+ F +
Sbjct: 210 SSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAA 269
Query: 265 KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ 324
K+++SWN IA + + E + +F +M G P FT++S+ ACA S++ GK
Sbjct: 270 KNVVSWNALIAGHARKGEGEHVMRLFLQMLR-QGFEPTHFTYSSVFTACASSGSLEQGKW 328
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
+HAH+I+ +GN L++MYAK G I + K+F ++ +++VSWN+II+ +A H L
Sbjct: 329 VHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGL 388
Query: 385 GGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFT 444
G AL+LFEQM ++P+ +TF+ +LTAC+H+GL+ EG+ YF M+K + I + H
Sbjct: 389 GAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK-HKIEAQVAHHV 447
Query: 445 CLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPT 504
++DLLGRAG+L EA ++ ++ P+ V G LL +CR+ +++ +G A+Q+F L P
Sbjct: 448 TVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPH 507
Query: 505 TTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSK 564
+ P+VLLSN+YAS G D A RKM+K+SG+KKEP+ S +E++ F + SH
Sbjct: 508 DSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPM 567
Query: 565 IGEINYMLKTLS 576
EI M + +S
Sbjct: 568 REEIQRMWEKIS 579
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 221/396 (55%), Gaps = 9/396 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S +L+ C+ + L+QG ++HA + + D+++ N +LN+YAKCG + A+ +FD+M
Sbjct: 109 SKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPT 168
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM-HL--LPNEYIFASAISACAGIQSLVKGQQI 122
+++VSW+ +ISG+ Q+G+ AL F +M HL PNE+ +S + A S G+Q+
Sbjct: 169 KDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQL 228
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
HA+SLK+GY VG+SL+ MY + + +A +++ N+VS+NALIAG +
Sbjct: 229 HAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEG 288
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E +F MLRQG P F+++ C+ S L +G +H +K + ++GNT+
Sbjct: 289 EHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTL 348
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y+K I +A+K FR + ++D++SWN+ I+ + + L +F++M V+P+
Sbjct: 349 IDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAK-VQPN 407
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+ TF S+L AC+ + G+ + + ++ V +V++ + G ++ + K
Sbjct: 408 EITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIE 467
Query: 363 EM-LHRNVVSWNTIIAA---HANHRLG-GSALKLFE 393
EM + W ++ + H N LG +A ++FE
Sbjct: 468 EMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFE 503
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 149/281 (53%), Gaps = 10/281 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SSLL + G LHA LK G +V V + +L++YA+ M A+ +F+ +
Sbjct: 208 TLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSL 267
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ +N+VSW+A+I+GH + GE + F QM P + ++S +ACA SL +G+
Sbjct: 268 AAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGK 327
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+HA+ +K G I+++GN+LI MY K G DA V+ + ++VS+N++I+G+ ++
Sbjct: 328 WVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHG 387
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ ++F+ ML+ + P+ +F L CS S L +G L K K+E+
Sbjct: 388 LGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHV 447
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLIS----WNTFIAAC 277
T++ L + + EA K IEE + W + +C
Sbjct: 448 TVVDLLGRAGRLNEANK---FIEEMPIKPTAAVWGALLGSC 485
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 179/572 (31%), Positives = 296/572 (51%), Gaps = 5/572 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++S LL + + G+ H ++K+G V N +++ YAK + A VFD M
Sbjct: 412 ALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRM 471
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEY---IFASAISACAGIQSLVKGQ 120
++ +SW+++ISG G + A+E F +M + +E S + ACA G+
Sbjct: 472 PHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGR 531
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H YS+K G + + N+L+ MY ++ + N+VS+ A+I +
Sbjct: 532 VVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAG 591
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+K + + M+ G+ PD F+ L + L++G +H ++ +E V N
Sbjct: 592 LFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVAN 651
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+M +Y + EA F + KD+ISWNT I S + S+F +M +
Sbjct: 652 ALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQ--FK 709
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P+ T IL A A ++S++ G++IHA+ +R +D NALV+MY KCG + + L
Sbjct: 710 PNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVL 769
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+ + +N++SW +IA + H G A+ LFEQM+ +G++PD+ +F +L AC H+GL
Sbjct: 770 FDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLT 829
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG +FN+M K Y I P ++H+TC++DLL G L EA E+ + P+ D + +LL
Sbjct: 830 AEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLH 889
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
CR+ RDV + E++A ++F L+P T YVLL+N+YA W V + + GL++
Sbjct: 890 GCRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLREN 949
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYML 572
S IEV+G F +H + I L
Sbjct: 950 TGCSWIEVRGKVHVFIADNRNHPEWNRIAEFL 981
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 240/497 (48%), Gaps = 22/497 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDV---------IVSNHVLNLYAKCGKMI 54
++ S+L C++ G +H +K G+ D+ + + ++ +Y KCG M
Sbjct: 301 TVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMG 360
Query: 55 LARKVFDEM-SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISAC 110
AR+VFD M S+ N+ W+ ++ G+ +A E +L F QMH L P+E+ + +
Sbjct: 361 SARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCI 420
Query: 111 AGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFN 170
+ G H Y +K G+ + V N+LIS Y K +A+LV+ + +S+N
Sbjct: 421 TCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWN 480
Query: 171 ALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC 230
++I+G N + E+F M QG D + L C+ S+ G ++H +VK
Sbjct: 481 SVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKT 540
Query: 231 KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVF 290
L + N ++ +YS + + FR + +K+++SW I + + ++K +
Sbjct: 541 GLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLL 600
Query: 291 KEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
+EM D G++PD F S+L AG S++ GK +H + IR + + + V NAL+ MY
Sbjct: 601 QEMVLD-GIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVN 659
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGL 410
C + + +F+ + +++++SWNT+I ++ + + LF M KP++VT +
Sbjct: 660 CRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQ-FKPNTVTMTCI 718
Query: 411 LTACNHAGLVKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA----EEYTKK 465
L A ++ G E + ++ + G D L+D+ + G LL A + TKK
Sbjct: 719 LPAVASISSLERGREIHAYALRR--GFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKK 776
Query: 466 FPLGQDPIVLGTLLSAC 482
+ ++ G + C
Sbjct: 777 NLISWTIMIAGYGMHGC 793
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 218/449 (48%), Gaps = 19/449 (4%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++S +L + ++ +G +H + K+G+ V+N ++ LY++CG M A +VFD
Sbjct: 198 AHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFD 257
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNE---YIFASAISACAGIQSLVK 118
M R+ +SW++ ISG+ G H A++ FS+M E S + ACA + +
Sbjct: 258 SMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELV 317
Query: 119 GQQIHAYSLKFG----YASI-----SFVGNSLISMYMKVGYSSDALLVYGE-AFEPNLVS 168
G+ +H YS+K G S+ +G+ L+ MY+K G A V+ + N+
Sbjct: 318 GKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHV 377
Query: 169 FNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV 228
+N ++ G+ + + E+ +F+ M G+ PD + + L+ + + R G++ H V
Sbjct: 378 WNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLV 437
Query: 229 KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLS 288
K + V N +++ Y+K N+I A F + +D ISWN+ I+ C+ + +
Sbjct: 438 KLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIE 497
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMY 348
+F M G D T S+L ACA G+ +H + ++ L + + NAL++MY
Sbjct: 498 LFVRMWM-QGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMY 556
Query: 349 AKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
+ C + ++F M +NVVSW +I ++ L L ++M GIKPD
Sbjct: 557 SNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVT 616
Query: 409 GLLTACNHAGLVKEGE-----AYFNSMEK 432
+L +K+G+ A N MEK
Sbjct: 617 SVLHGFAGDESLKQGKSVHGYAIRNGMEK 645
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 215/429 (50%), Gaps = 19/429 (4%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVL--KMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
+S +++ C + ++L+ HA V GI V+ VL Y KCG + AR VF
Sbjct: 95 RSYCAVVQLCGEERSLEAARRAHALVRAGTGGIIGSVLGKRLVL-AYLKCGDLGGARMVF 153
Query: 61 DEMSER--NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQS 115
DEM R ++ W++++S + +AG+ + F QM + P+ + + + A + S
Sbjct: 154 DEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGS 213
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
+ +G+ IH K G V N+LI++Y + G DA+ V+ + +S+N+ I+G
Sbjct: 214 ITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISG 273
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC----K 231
+ N ++ ++F M +G + L C+ G ++H ++K
Sbjct: 274 YFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWD 333
Query: 232 LES-----NPFVGNTIMALYSKFNLIGEAEKAFRLIEEK-DLISWNTFIAACSHCADYEK 285
LES + +G+ ++ +Y K +G A + F + K ++ WN + + A++E+
Sbjct: 334 LESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEE 393
Query: 286 GLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALV 345
L +F++M ++ G+ PD+ + +L L+ + G H +L+++ V NAL+
Sbjct: 394 SLLLFEQM-HELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALI 452
Query: 346 NMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV 405
+ YAK +I + +F+ M H++ +SWN++I+ ++ L A++LF +M G + DS
Sbjct: 453 SFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDST 512
Query: 406 TFIGLLTAC 414
T + +L AC
Sbjct: 513 TLLSVLPAC 521
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 111/213 (52%), Gaps = 4/213 (1%)
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEK--DLISWNTFIAACSHCADYEKGLSVFKEMSN 295
+G ++ Y K +G A F + + D+ W + ++A + D+++G+S+F++M
Sbjct: 132 LGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQC 191
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
GV PD + +L A L S+ G+ IH L ++ L + V NAL+ +Y++CG +
Sbjct: 192 -CGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCME 250
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ ++F+ M R+ +SWN+ I+ + ++ A+ LF +M + G + SVT + +L AC
Sbjct: 251 DAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACA 310
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID 448
G G+ K+ G+ D+E ID
Sbjct: 311 ELGFELVGKVVHGYSMKS-GLLWDLESVQSGID 342
>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19191, mitochondrial; Flags: Precursor
gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 185/563 (32%), Positives = 301/563 (53%), Gaps = 9/563 (1%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+HA ++K DV V ++++ KC + A KVF+ M ER+ +W+AM+SG Q+G
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133
Query: 84 HLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
A F +M L P+ + I + + +SL + +HA ++ G V N+
Sbjct: 134 TDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANT 193
Query: 141 LISMYMKVGYSSDALLVYGEAFEP---NLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
IS Y K G A LV+ EA + +VS+N++ + + F ++ LMLR+
Sbjct: 194 WISTYGKCGDLDSAKLVF-EAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEF 252
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
PD +F C L +G ++H + + + NT +++YSK A
Sbjct: 253 KPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARL 312
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F ++ + +SW I+ + D ++ L++F M G +PD T S+++ C
Sbjct: 313 LFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKS-GEKPDLVTLLSLISGCGKFG 371
Query: 318 SVQHGKQIHAHLIRMRLNQD-VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
S++ GK I A +D V + NAL++MY+KCG I + +F+ + VV+W T+I
Sbjct: 372 SLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMI 431
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
A +A + + ALKLF +M KP+ +TF+ +L AC H+G +++G YF+ M++ Y I
Sbjct: 432 AGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNI 491
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAK 496
SP ++H++C++DLLGR GKL EA E + D + G LL+AC++ R+V I E+ A+
Sbjct: 492 SPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAE 551
Query: 497 QLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFT 556
LF+L+P +PYV ++N+YA+ GMW A R ++K +KK P S+I+V G FT
Sbjct: 552 SLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFT 611
Query: 557 VAEFSHSKIGEINYMLKTLSLAA 579
V E H + I + L LSL A
Sbjct: 612 VGEHGHVENEVIYFTLNGLSLFA 634
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 198/429 (46%), Gaps = 26/429 (6%)
Query: 54 ILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISAC 110
++ R+++ ++ +W+ I + + +L F +M PN + F AC
Sbjct: 3 LIHRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKAC 62
Query: 111 AGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFN 170
A + + + +HA+ +K + S FVG + + M++K A V+ E + ++N
Sbjct: 63 ARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWN 122
Query: 171 ALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC 230
A+++GF ++ +K F +F+ M + PD + ++ S L+ +H + ++
Sbjct: 123 AMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRL 182
Query: 231 KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKD--LISWNTFIAACSHCADYEKGLS 288
++ V NT ++ Y K + A+ F I+ D ++SWN+ K S
Sbjct: 183 GVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMF----------KAYS 232
Query: 289 VFKEMSNDHGV---------RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG 339
VF E + G+ +PD TF ++ A+C ++ G+ IH+H I + +QD+
Sbjct: 233 VFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIE 292
Query: 340 VGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG 399
N ++MY+K + LF+ M R VSW +I+ +A AL LF M +G
Sbjct: 293 AINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSG 352
Query: 400 IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD-IEHFTCLIDLLGRAGKLLE 458
KPD VT + L++ C G ++ G+ + ++ YG D + LID+ + G + E
Sbjct: 353 EKPDLVTLLSLISGCGKFGSLETGK-WIDARADIYGCKRDNVMICNALIDMYSKCGSIHE 411
Query: 459 AEEYTKKFP 467
A + P
Sbjct: 412 ARDIFDNTP 420
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 185/390 (47%), Gaps = 13/390 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD-- 61
++ +L+ S K+L+ ++HA +++G+ V V+N ++ Y KCG + A+ VF+
Sbjct: 155 TVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAI 214
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
+ +R +VSW++M + GE A + M P+ F + ++C ++L +
Sbjct: 215 DRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQ 274
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ IH++++ G N+ ISMY K + A L++ VS+ +I+G+ E
Sbjct: 275 GRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAE 334
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLT--VKCKLESNP 236
++ +F M++ G PD + + C L G + CK N
Sbjct: 335 KGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCK-RDNV 393
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
+ N ++ +YSK I EA F EK +++W T IA + + + L +F +M D
Sbjct: 394 MICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMI-D 452
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG--NALVNMYAKCGLI 354
+P+ TF ++L ACA S++ G + + H+++ N G+ + +V++ + G +
Sbjct: 453 LDYKPNHITFLAVLQACAHSGSLEKGWE-YFHIMKQVYNISPGLDHYSCMVDLLGRKGKL 511
Query: 355 SCSYKLFNEMLHR-NVVSWNTIIAAHANHR 383
+ +L M + + W ++ A HR
Sbjct: 512 EEALELIRNMSAKPDAGIWGALLNACKIHR 541
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 2/219 (0%)
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
+ +R+ + +WN I + D + L +F+EM G P++FTF + ACA
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRG-GFEPNNFTFPFVAKACAR 64
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
LA V + +HAHLI+ DV VG A V+M+ KC + + K+F M R+ +WN +
Sbjct: 65 LADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAM 124
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYG 435
++ A LF +M+ I PDSVT + L+ + + +K EA +++ G
Sbjct: 125 LSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEA-MHAVGIRLG 183
Query: 436 ISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
+ + I G+ G L A+ + G +V
Sbjct: 184 VDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVV 222
>gi|414584791|tpg|DAA35362.1| TPA: hypothetical protein ZEAMMB73_898339 [Zea mays]
Length = 605
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 175/507 (34%), Positives = 281/507 (55%), Gaps = 8/507 (1%)
Query: 37 VIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL 96
V + NH+L Y KC L +V DEM RN VSWSA I+G Q AL F +M L
Sbjct: 83 VFLHNHLLIAYFKCRLPHLGLRVLDEMPRRNAVSWSAAIAGLTQGDRARDALALFRRMRL 142
Query: 97 L---PNEYIFASAISACAGIQSLVKG--QQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
PNE+ ASA+ A + + + G +Q++A S++ G+ S F+ N+ ++ +
Sbjct: 143 AGCPPNEFALASALGAIS-LAPVGTGHARQLYALSVRLGFGSSVFLTNAFLAAMARHLQL 201
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
DA+ ++ A ++VS+N L+A F + +G+ +++ M+R+ + D FSF+ L
Sbjct: 202 EDAVRLFDGASARDIVSWNTLLAAFARHWS-VQGWILWRRMVREAVGADGFSFSTILSGL 260
Query: 212 SVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWN 271
+V+ L G+ +H VK + VGN+++ +Y K + + AF I KD++SW
Sbjct: 261 AVTASLAGGLQVHAQLVKSGFCDDVCVGNSLVEMYMKSKCLADGVMAFAEIRCKDVVSWT 320
Query: 272 TFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
A C HC + K + + +M D GV P+++TFA+ ACA L + G+++H ++I+
Sbjct: 321 GLAAGCLHCGEPAKAIGILGQMMLD-GVMPNNYTFATSANACASLTDLDEGRKVHGYVIK 379
Query: 332 MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
+ + DVGV NAL++MYAKCG ++C++K+F M R V+SW +I A A++ A+++
Sbjct: 380 LGDDSDVGVNNALIDMYAKCGSVACAHKVFQSMQQRPVISWTAMIMAFAHNGRAREAVEV 439
Query: 392 FEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLG 451
F+ M G+ P+ VT + +L AC+ G V EG YFN+M+ +GI P +H+ C++DLLG
Sbjct: 440 FDDMLLRGVAPNRVTLVCVLYACSQGGFVDEGWIYFNAMKDKFGIQPGEDHYACMVDLLG 499
Query: 452 RAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVL 511
+AG++ EAEE P +V LL AC L + +G R A+ L+ S Y+L
Sbjct: 500 KAGQIEEAEELISGMPFRPGVLVWQALLGACHLHGNEAVGRRAAEHALALENDDPSTYML 559
Query: 512 LSNLYASDGMWGDVAGARKMLKDSGLK 538
L N A W R ++ LK
Sbjct: 560 LCNTLAGQHDWDGARSVRVLMGSQTLK 586
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 138/279 (49%), Gaps = 5/279 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S S++L + T +L G+ +HA ++K G DV V N ++ +Y K + F E+
Sbjct: 252 SFSTILSGLAVTASLAGGLQVHAQLVKSGFCDDVCVGNSLVEMYMKSKCLADGVMAFAEI 311
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+++VSW+ + +G GE A+ QM L +PN Y FA++ +ACA + L +G+
Sbjct: 312 RCKDVVSWTGLAAGCLHCGEPAKAIGILGQMMLDGVMPNNYTFATSANACASLTDLDEGR 371
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H Y +K G S V N+LI MY K G + A V+ + ++S+ A+I F N
Sbjct: 372 KVHGYVIKLGDDSDVGVNNALIDMYAKCGSVACAHKVFQSMQQRPVISWTAMIMAFAHNG 431
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI-LHCLTVKCKLESNPFVG 239
+ + EVF ML +G+ P+R + L CS + +G I + + K ++
Sbjct: 432 RAREAVEVFDDMLLRGVAPNRVTLVCVLYACSQGGFVDEGWIYFNAMKDKFGIQPGEDHY 491
Query: 240 NTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAAC 277
++ L K I EAE+ + ++ W + AC
Sbjct: 492 ACMVDLLGKAGQIEEAEELISGMPFRPGVLVWQALLGAC 530
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 185/577 (32%), Positives = 309/577 (53%), Gaps = 6/577 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ +LL CS + G+ +H +K+G+ +++V N ++++Y+KCG + A +F ++
Sbjct: 315 TMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKI 374
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP-----NEYIFASAISACAGIQSLVK 118
+++VSW++MI + + G + +M + NE + + AC L+
Sbjct: 375 ENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLS 434
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+ +H YSL+ + + N+ I+ Y K G A V+ ++ S+NA+I G +
Sbjct: 435 LRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQ 494
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N P K + + M R G+LPD FS L C L+ G +H ++ LE N FV
Sbjct: 495 NGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFV 554
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++++LY + F + +K+ + WN ++ S + LS+F++M +D G
Sbjct: 555 AVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSD-G 613
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ PD+ ASIL AC+ L+++ GK++H ++ L +D V +L++MYAK G + S
Sbjct: 614 LEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQ 673
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
++FN + + V SWN +I H G A++LFE MK + +PD TF+G+L AC HAG
Sbjct: 674 RIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAG 733
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV EG Y M+ Y + P++EH+ C+ID+LGRAG+L EA + + P D + +L
Sbjct: 734 LVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSL 793
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
LS+ D+ +GE+ A++L L+ Y+LLSNLYA+ G W V R+ +KD L+
Sbjct: 794 LSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQ 853
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
K+ S IE++G F E S+ EI M L
Sbjct: 854 KDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRL 890
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 219/431 (50%), Gaps = 10/431 (2%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAV-LKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+++ LL C + K ++ G L + + D +++ ++ +Y+ CG + +R VFD
Sbjct: 108 EAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFD 167
Query: 62 EMSERNLVSWSAMISGH-----HQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSL 116
+ +NL W+A++SG+ + H LE S P+ + F I AC G +
Sbjct: 168 RLLNKNLFQWNALVSGYVRNELYDEAIHTF-LELISVTEFQPDNFTFPCLIKACTGKCDI 226
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G+ +H ++K G FVGN++I++Y K G+ +A+ ++ + E NL+S+N+LI GF
Sbjct: 227 HLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGF 286
Query: 177 VENQQPEKGFEVFKLMLR--QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
EN + + F+ +L GL+PD + L +CS ++ GM++H + VK L
Sbjct: 287 SENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVH 346
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM- 293
V N ++ +YSK + EA FR IE K ++SWN+ I A S + + ++M
Sbjct: 347 ELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMW 406
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
+ + ++ T ++L AC + + + +H + +R + NA + YAKCG
Sbjct: 407 MEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGS 466
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ + +F M ++V SWN +I HA + AL + +M GI PD + + LL A
Sbjct: 467 LVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLA 526
Query: 414 CNHAGLVKEGE 424
C GL++ G+
Sbjct: 527 CGRLGLLQYGK 537
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 115/229 (50%), Gaps = 4/229 (1%)
Query: 234 SNPFVGNT-IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
S FV NT ++ +YS E+ F + K+L WN ++ Y++ + F E
Sbjct: 140 SGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLE 199
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
+ + +PD+FTF ++ AC G + GK +H ++M L D+ VGNA++ +Y KCG
Sbjct: 200 LISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCG 259
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM--KATGIKPDSVTFIGL 410
+ + +LF++M +N++SWN++I + + A + F + G+ PD T + L
Sbjct: 260 FLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTL 319
Query: 411 LTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
L C+ G V G + M G+ ++ LID+ + G L EA
Sbjct: 320 LPVCSGEGNVDVG-MVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEA 367
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 169/492 (34%), Positives = 279/492 (56%), Gaps = 2/492 (0%)
Query: 85 LLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISM 144
L L+ L P ++ S I+ACA ++L ++IHA+ +A +F+ NSLI M
Sbjct: 36 LRDLDLLDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHM 95
Query: 145 YMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSF 204
Y K DA V+ + ++VS+ +LIAG+ +N P + + ML+ P+ F+F
Sbjct: 96 YCKCRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTF 155
Query: 205 AGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE 264
A L+ D G +H L VKC + +VG+ ++ +Y++ + A F ++
Sbjct: 156 ASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDS 215
Query: 265 KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ 324
K+ +SWN I+ + D E L F EM + G FT++S+ ++ A L +++ GK
Sbjct: 216 KNGVSWNALISGFARKGDGESALMTFAEMLRN-GFEATHFTYSSVFSSIARLGALEQGKW 274
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
+HAH+I+ R VGN L++MYAK G + + K+F+ + ++++V+WN+++ A A + L
Sbjct: 275 VHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGL 334
Query: 385 GGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFT 444
G A+ FE+M+ +G+ + +TF+ +LTAC+H GLVKEG+ YF M K Y + P+I+H+
Sbjct: 335 GKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMM-KEYDLEPEIDHYV 393
Query: 445 CLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPT 504
++ LLGRAG L A + K P+ V G LL+ACR+ ++ +G+ A +F L P
Sbjct: 394 TVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPD 453
Query: 505 TTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSK 564
+ P VLL N+YAS G W A R M+K +G+KKEP+ S +E++ + F + +H +
Sbjct: 454 DSGPPVLLYNIYASTGQWDAAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQ 513
Query: 565 IGEINYMLKTLS 576
EI M +S
Sbjct: 514 AEEIYKMWGEIS 525
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 193/386 (50%), Gaps = 8/386 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S + C+++K L+ +HA + D + N ++++Y KC ++ AR VFD+M +
Sbjct: 56 SFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRK 115
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
++VSW+++I+G+ Q + A+ M PN + FAS + A G+QIH
Sbjct: 116 DMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIH 175
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A ++K G+ +VG++L+ MY + G A V+ + N VS+NALI+GF E
Sbjct: 176 ALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGE 235
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
F MLR G F+++ + L +G +H +K + + FVGNT++
Sbjct: 236 SALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLL 295
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K + +A K F ++ KDL++WN+ + A + ++ +S F+EM GV +
Sbjct: 296 DMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKS-GVYLNQ 354
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK-LFN 362
TF IL AC+ V+ GK+ + L ++ +V + + GL++ + +F
Sbjct: 355 ITFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFK 414
Query: 363 EMLHRNVVSWNTIIAA---HANHRLG 385
+ W ++AA H N ++G
Sbjct: 415 MPMEPTAAVWGALLAACRMHKNAKVG 440
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SS+ ++ AL+QG +HA V+K + V N +L++YAK G MI ARKVFD +
Sbjct: 255 TYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRV 314
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
++LV+W++M++ Q G A+ F +M + N+ F ++AC+
Sbjct: 315 DNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACS 365
>gi|302143938|emb|CBI23043.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 191/524 (36%), Positives = 280/524 (53%), Gaps = 15/524 (2%)
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
E S+ NLVSWSA+I G Q G ALE +M PN AS + ACA +Q+L
Sbjct: 5 ENSKPNLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNL 64
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G++IH Y + G+ S FV N L+ +Y + AL ++ N+VS+N +I G+ E
Sbjct: 65 GKEIHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCE 124
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHC--LTVKCKLESNP 236
N EK E+F M G D S+ I +++L K L L E +
Sbjct: 125 NGNVEKAKELFDQMELVG--KDTISWNS--MISGYADNLLKCEDLKAAQLAFDGVTERDT 180
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIE----EKDLISWNTFIAACSHCADYEKGLSVFKE 292
N +++ Y+ N + + + ++ E ++ +WN I+ E L +F E
Sbjct: 181 ATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTE 240
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
M +RPD +T IL ACA LA++ GKQ+HAH IR DV +G ALV+MYAKCG
Sbjct: 241 MQTS-SLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCG 299
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
I + +++N + + N+VS N ++ A+A H G + LF M G +PD VTF+ +L+
Sbjct: 300 SIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLS 359
Query: 413 ACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDP 472
+C HAG V+ G +F+ M Y ++P ++H+TC++DLL RAG+L EA E KK P D
Sbjct: 360 SCVHAGAVETGHEFFDLM-TYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDS 418
Query: 473 IVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKML 532
++ G LL C + +V +GE A+ L L+P T YVLL+NLYA G W D+ R+M+
Sbjct: 419 VMWGALLGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYAGRWHDLDRTRQMI 478
Query: 533 KDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
KD G+ K P S IE + F + SH K +I L L+
Sbjct: 479 KDRGMHKSPGCSWIEDREDIHVFLSCDKSHEKTEDIYTTLDNLN 522
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 190/385 (49%), Gaps = 11/385 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A++++S+L C++ + L G +H V + G + V N ++++Y +C M A K+F
Sbjct: 46 ARTLASVLPACARLQNLNLGKEIHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFS 105
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYI-FASAISACAGIQSLVKGQ 120
S +N+VS++ MI G+ + G A E F QM L+ + I + S IS A +L+K +
Sbjct: 106 GFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYA--DNLLKCE 163
Query: 121 QIHAYSLKFGYAS--ISFVGNSLISMYMKVGYSSD----ALLVYGEAFEPNLVSFNALIA 174
+ A L F + + N LIS Y + + G+ FEPN+ ++N +I+
Sbjct: 164 DLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIIS 223
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
G VEN E +F M L PD ++ L C+ + +G +H +++ E
Sbjct: 224 GHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYEL 283
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
+ +G ++ +Y+K I A + + I +L+S N + A + ++G+++F+ M
Sbjct: 284 DVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNML 343
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
+ G RPD TF S+L++C +V+ G + + + + +V++ ++ G +
Sbjct: 344 GN-GFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTYYNVTPSLKHYTCIVDLLSRAGRL 402
Query: 355 SCSYKLFNEMLHR-NVVSWNTIIAA 378
+Y+L ++ + + V W ++
Sbjct: 403 DEAYELVKKIPRKPDSVMWGALLGG 427
>gi|242056803|ref|XP_002457547.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
gi|241929522|gb|EES02667.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
Length = 762
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 186/562 (33%), Positives = 305/562 (54%), Gaps = 16/562 (2%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
+LH V K+G V+V N +L+ Y K G + AR+VF EM R+ ++++AMI G + G
Sbjct: 154 TLHPVVTKLGFGASVVVCNTLLDAYCKQGFIAAARRVFLEMPHRDSITYNAMIMGCSRQG 213
Query: 83 EHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
H ALE F+ M + + + F+S ++ G+ L G+QIH ++ + FV N
Sbjct: 214 RHGEALELFAAMRREGVDTSHFTFSSLLTVATGMVDLHLGRQIHGLFVRANPSCNVFVNN 273
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL-- 197
+L+ Y K D ++ E E + VS+N +I+ N+ ++F+ M G
Sbjct: 274 ALLDFYSKCDSLGDLKQLFDEMSERDNVSYNVMISACSWNRCGGMALQLFRDMQTLGFDR 333
Query: 198 --LP--DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
LP S AG L + + +ILH LT++ FVGN ++ +YSK ++
Sbjct: 334 RTLPYASLLSVAGALPHIKIGRQIHAQLILHGLTLE------DFVGNALIDMYSKCGMLD 387
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
A+ F +K ISW I C E+ L +F +M G+ PD T +SI+ +
Sbjct: 388 AAKTIFAYKSDKTAISWTALITGCVQNGQNEEALQLFCDMRR-AGLSPDRATCSSIMKSS 446
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
+ LA + G+Q+HA+L + V G+AL++MYAKCG + + + FNEM +N ++WN
Sbjct: 447 SSLAVIGIGRQLHAYLTKSGHMPSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWN 506
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT 433
+I+A+A + +A+++F+ M G+ PD VTF+ +L AC H GL +E YF+ M
Sbjct: 507 AVISAYAQYGQAKNAIRMFDSMLHCGLCPDPVTFLSVLAACGHNGLAEECMKYFDLMRYY 566
Query: 434 YGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGER 493
Y +SP EH++C+ID LGRAG + ++ + P DPI+ ++L +CR+ + +
Sbjct: 567 YSMSPWKEHYSCVIDTLGRAGCFDKIQKVIDEMPFEDDPIIWSSILHSCRIYGNQDLATV 626
Query: 494 LAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFE 553
A++LF + PT + YV+LSN+YA G W A +K+++D G+KKE S +E++
Sbjct: 627 AAEKLFTMVPTDATAYVILSNIYAKAGNWEGAARVKKIMRDRGVKKESGNSWVEIKQKIY 686
Query: 554 KFTVAEFSHSKIGEINYMLKTL 575
F+ + ++ I EI L+ L
Sbjct: 687 MFSSNDHTNPMIDEIKKELERL 708
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 161/319 (50%), Gaps = 6/319 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SSLL + L G +H ++ +V V+N +L+ Y+KC + +++FDEM
Sbjct: 236 TFSSLLTVATGMVDLHLGRQIHGLFVRANPSCNVFVNNALLDFYSKCDSLGDLKQLFDEM 295
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
SER+ VS++ MIS +AL+ F M L +AS +S + + G+
Sbjct: 296 SERDNVSYNVMISACSWNRCGGMALQLFRDMQTLGFDRRTLPYASLLSVAGALPHIKIGR 355
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIHA + G FVGN+LI MY K G A ++ + +S+ ALI G V+N
Sbjct: 356 QIHAQLILHGLTLEDFVGNALIDMYSKCGMLDAAKTIFAYKSDKTAISWTALITGCVQNG 415
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
Q E+ ++F M R GL PDR + + ++ S + G LH K + F G+
Sbjct: 416 QNEEALQLFCDMRRAGLSPDRATCSSIMKSSSSLAVIGIGRQLHAYLTKSGHMPSVFSGS 475
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y+K + EA + F + EK+ I+WN I+A + + + +F M + G+
Sbjct: 476 ALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAYAQYGQAKNAIRMFDSMLH-CGLC 534
Query: 301 PDDFTFASILAACA--GLA 317
PD TF S+LAAC GLA
Sbjct: 535 PDPVTFLSVLAACGHNGLA 553
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 5/127 (3%)
Query: 286 GLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALV 345
+S+F++M + PDD T ++L + G +H + ++ V V N L+
Sbjct: 121 AVSLFRDMLREGEASPDDVTITTVL----NVPGCDVG-TLHPVVTKLGFGASVVVCNTLL 175
Query: 346 NMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV 405
+ Y K G I+ + ++F EM HR+ +++N +I + G AL+LF M+ G+
Sbjct: 176 DAYCKQGFIAAARRVFLEMPHRDSITYNAMIMGCSRQGRHGEALELFAAMRREGVDTSHF 235
Query: 406 TFIGLLT 412
TF LLT
Sbjct: 236 TFSSLLT 242
>gi|147846491|emb|CAN79511.1| hypothetical protein VITISV_014157 [Vitis vinifera]
Length = 1007
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 183/566 (32%), Positives = 301/566 (53%), Gaps = 32/566 (5%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
+H C A+++G+ +H +++ G V N +L++YA M A ++FDEM ER++
Sbjct: 157 IHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCERDV 215
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQQIHA 124
+SWS MI G+ Q GE +AL+ F +M + + S + ACA + G+ +H
Sbjct: 216 ISWSVMIGGYVQTGEAXMALQLFLEMXSNAXIELDGITMVSVLKACANTGDISMGRSVHG 275
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ G FVGNS+I MY K A + E N VS+N++I+G V ++ +
Sbjct: 276 VVICRGLDYDLFVGNSIIDMYSKXDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSE 335
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
+F M + G D + L+ C D + +H + ++ E N FV N+++
Sbjct: 336 ALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLID 395
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
YSK +LI A K F ++ KD +SW+ IA +HC ++ +++F+EM N +P+
Sbjct: 396 AYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEM-NQAQEKPNGV 454
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T S+L A + A ++ K H IR L +V VG A+++MYAKCG I S K F+++
Sbjct: 455 TILSLLEAFSVSADLKRSKWAHGIXIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQI 514
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+N+VSW +IAA + L AL L +MK G+KP+ VT + +L+AC+H GLV+EG
Sbjct: 515 PEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNXVTTLSVLSACSHGGLVEEGL 574
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP--LGQDPIVLGTLLSAC 482
++F +M + +G+ P +EH++C++D+L RAGKL A +K P + + G LLSAC
Sbjct: 575 SFFENMVQDHGVEPGLEHYSCMVDMLXRAGKLNXAMNLIEKMPERMRDGAGLWGALLSAC 634
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
R + +G A ++ L+P +++ Y L S++YA+ G
Sbjct: 635 RSSGNSRLGAGAAXRVLXLEPQSSAGYFLASSMYAASG---------------------- 672
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEI 568
++ V+ +F + SH + GEI
Sbjct: 673 --LVHVEDKAWRFVAGDESHPRAGEI 696
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 142/517 (27%), Positives = 261/517 (50%), Gaps = 15/517 (2%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+ S+L CS + ++ G S+HA++LK G N + Y K G + A VFD M
Sbjct: 53 VHSILKACS-SLPVRHGKSIHASLLKQGFDSLTSTGNSXXDFYMKTGALDSALFVFDSMR 111
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQ 121
R+ VSW+ MI GH G L +F Q ++ PN AI AC + ++ +G +
Sbjct: 112 SRDSVSWNIMIHGHLSRGASDXGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLK 171
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H Y ++ G+ I V NSL+SMY A ++ E E +++S++ +I G+V+ +
Sbjct: 172 MHGYIIRSGFLDIPSVQNSLLSMYADNDMER-AEELFDEMCERDVISWSVMIGGYVQTGE 230
Query: 182 PEKGFEVFKLMLRQGLLP-DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
++F M + D + L+ C+ + D+ G +H + + L+ + FVGN
Sbjct: 231 AXMALQLFLEMXSNAXIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGN 290
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+I+ +YSK + A KAF + ++ +SWN+ I+ + + LS+F M G R
Sbjct: 291 SIIDMYSKXDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGK-AGFR 349
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D+ T ++L +C K IH+ +IR + V N+L++ Y+KC LI ++KL
Sbjct: 350 ADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKL 409
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+ + ++ VSW+ +IA + A+ LF++M KP+ VT + LL A + + +
Sbjct: 410 FDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADL 469
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
K + + + + G++ ++ T ++D+ + G++ + + + P ++ + G +++
Sbjct: 470 KRSK-WAHGIXIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIP-EKNIVSWGAMIA 527
Query: 481 AC---RLRRDVVIGERLAKQLFH-LQPTTTSPYVLLS 513
AC L RD + L++ H L+P + +LS
Sbjct: 528 ACGMNGLARDAL--ALLSEMKLHGLKPNXVTTLSVLS 562
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 195/400 (48%), Gaps = 21/400 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+L C+ T + G S+H V+ G+ D+ V N ++++Y+K A K F+EM
Sbjct: 253 TMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKXDDHESAFKAFNEM 312
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
RN VSW+++ISG + +H AL F M +E + + +C + +
Sbjct: 313 PCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCK 372
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IH+ +++GY FV NSLI Y K A ++ + VS++A+IAGF
Sbjct: 373 FIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCG 432
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+P++ +F+ M + P+ + LE SVS DL++ H + ++ L + VG
Sbjct: 433 KPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIXIRRGLAAEVAVGT 492
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
I+ +Y+K IG + KAF I EK+++SW IAAC L++ EM HG++
Sbjct: 493 AILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKL-HGLK 551
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNAL------VNMYAKCGLI 354
P+ T S+L+AC+ V+ G +++ QD GV L V+M + G +
Sbjct: 552 PNXVTTLSVLSACSHGGLVEEGLSFFENMV-----QDHGVEPGLEHYSCMVDMLXRAGKL 606
Query: 355 SCSYKLFNEMLHR---NVVSWNTIIAA---HANHRLGGSA 388
+ + L +M R W +++A N RLG A
Sbjct: 607 NXAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGA 646
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 267 LISWNTFIAACSH--CADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ 324
L +WN I ++ D + S + +M D SIL AC+ L V+HGK
Sbjct: 12 LPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKACSSLP-VRHGKS 70
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
IHA L++ + GN+ + Y K G + + +F+ M R+ VSWN +I H +
Sbjct: 71 IHASLLKQGFDSLTSTGNSXXDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGA 130
Query: 385 GGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
L F Q + +P+ T + + AC G ++EG
Sbjct: 131 SDXGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEG 169
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 171/492 (34%), Positives = 286/492 (58%), Gaps = 12/492 (2%)
Query: 87 ALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYM 146
A++ L + ++ I C +++ +G I + G+ + F+ N LI+MY+
Sbjct: 48 AMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYV 107
Query: 147 KVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAG 206
K +DA ++ + + N++S+ +I+ + + + +K E+ LMLR + P+ ++++
Sbjct: 108 KFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSS 167
Query: 207 GLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK- 265
L C+ +D+R +LHC +K LES+ FV + ++ +++K +GE E A + +E
Sbjct: 168 VLRSCNGMSDVR---MLHCGIIKEGLESDVFVRSALIDVFAK---LGEPEDALSVFDEMV 221
Query: 266 --DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGK 323
D I WN+ I + + + L +FK M G + T S+L AC GLA ++ G
Sbjct: 222 TGDAIVWNSIIGGFAQNSRSDVALELFKRMKR-AGFIAEQATLTSVLRACTGLALLELGM 280
Query: 324 QIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR 383
Q H H+++ +QD+ + NALV+MY KCG + + ++FN+M R+V++W+T+I+ A +
Sbjct: 281 QAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG 338
Query: 384 LGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF 443
ALKLFE+MK++G KP+ +T +G+L AC+HAGL+++G YF SM+K YGI P EH+
Sbjct: 339 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY 398
Query: 444 TCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQP 503
C+IDLLG+AGKL +A + + D + TLL ACR++R++V+ E AK++ L P
Sbjct: 399 GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDP 458
Query: 504 TTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHS 563
Y LLSN+YA+ W V R ++D G+KKEP S IEV F + + SH
Sbjct: 459 EDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHP 518
Query: 564 KIGEINYMLKTL 575
+I E++ L L
Sbjct: 519 QIVEVSKKLNQL 530
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 207/417 (49%), Gaps = 19/417 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S L+ C +A+ +G + + G +P + + N ++N+Y K + A ++FD+M
Sbjct: 63 TYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQM 122
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+RN++SW+ MIS + + H ALE M ++ PN Y ++S + +C G+ + +
Sbjct: 123 PQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---R 179
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H +K G S FV ++LI ++ K+G DAL V+ E + + +N++I GF +N
Sbjct: 180 MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNS 239
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ + E+FK M R G + ++ + L C+ L GM H V K + + + N
Sbjct: 240 RSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV--KYDQDLILNN 297
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y K + +A + F ++E+D+I+W+T I+ + ++ L +F+ M + G +
Sbjct: 298 ALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSS-GTK 356
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRM----RLNQDVGVGNALVNMYAKCGLISC 356
P+ T +L AC+ ++ G + ++ + + G ++++ K G +
Sbjct: 357 PNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYG---CMIDLLGKAGKLDD 413
Query: 357 SYKLFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
+ KL NEM + V+W T++ A R L + K + P+ LL+
Sbjct: 414 AVKLLNEMECEPDAVTWRTLLGACRVQR--NMVLAEYAAKKVIALDPEDAGTYTLLS 468
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 192/566 (33%), Positives = 301/566 (53%), Gaps = 31/566 (5%)
Query: 41 NHVLNLYAKCGKMILARKVF--DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL- 97
N +L++YA+ G + A+++F +LV+W+ MIS Q G A++ M L
Sbjct: 196 NALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALG 255
Query: 98 --PNEYIFASAISACAGIQSLVKGQQIHAYSLKFG-YASISFVGNSLISMYMKVGYSSDA 154
P+ FASA+ AC+ ++ L G+++HA+ LK A+ SFV ++L+ MY S A
Sbjct: 256 VRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHA 315
Query: 155 LLVYGEAFE--PNLVSFNALIAGFVENQ-QPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEI 210
V+ E L +NA+I G+ ++ E+ E+F M + G P + AG L
Sbjct: 316 RRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPA 375
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
C+ S +H VK + SN FV N +M +Y++ + EA F +I+ +D++SW
Sbjct: 376 CARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSW 435
Query: 271 NTFIAACSHCADYEKGLSVFKEMS--------------NDHGVR-----PDDFTFASILA 311
NT I C + + +EM +D V P++ T ++L
Sbjct: 436 NTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLP 495
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
CA LA+ GK+IH + +R L D+ VG+ALV+MYAKCG ++ + +F+ + RNV++
Sbjct: 496 GCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVIT 555
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATG-IKPDSVTFIGLLTACNHAGLVKEGEAYFNSM 430
WN +I A+ H LG AL LF++M A G P+ VTFI L AC+H+GLV G F M
Sbjct: 556 WNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGM 615
Query: 431 EKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI-VLGTLLSACRLRRDVV 489
++ YG P C++D+LGRAG+L EA G+ + T+L ACRL R+V
Sbjct: 616 KRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVK 675
Query: 490 IGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQ 549
+G A++LF L+P S YVLL N+Y++ G+W + R M++ G+ KEP S IE+
Sbjct: 676 LGRIAAERLFELEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIELD 735
Query: 550 GTFEKFTVAEFSHSKIGEINYMLKTL 575
G +F E +H + +++ + L
Sbjct: 736 GAIHRFMAGESAHPESAQVHAHMDAL 761
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 133/499 (26%), Positives = 233/499 (46%), Gaps = 44/499 (8%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
++ L T+A+ G SL A+L +P VSN +L YA+CG + A +F
Sbjct: 58 AAALRDSRSTRAIH-GASLRRALLH---RPTPAVSNALLTAYARCGDLDAALALFAATPP 113
Query: 66 --RNLVSWSAMISG---HHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGI--QSLVK 118
R+ VS++++IS + G L AL H + + + S + AC+ + Q
Sbjct: 114 DLRDAVSYNSLISALCLFRRWGHALDALRDMLADHEV-SSFTLVSVLLACSHLADQGHRL 172
Query: 119 GQQIHAYSLKFGY---ASISFVGNSLISMYMKVGYSSDA--LLVYGEAFEPNLVSFNALI 173
G++ HA++LK G+ F N+L+SMY ++G DA L A +LV++N +I
Sbjct: 173 GREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMI 232
Query: 174 AGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK-CKL 232
+ V+ + E+ +V M+ G+ PD +FA L CS L G +H +K L
Sbjct: 233 SLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDL 292
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE--KDLISWNTFIAA-CSHCADYEKGLSV 289
+N FV + ++ +Y+ + A + F ++ E + L WN I H E+ + +
Sbjct: 293 AANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIEL 352
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ-IHAHLIRMRLNQDVGVGNALVNMY 348
F M + G P + T A +L ACA + V GK+ +H ++++ + + V NAL++MY
Sbjct: 353 FSRMEAEAGCAPSETTMAGVLPACA-RSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMY 411
Query: 349 AKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK-----ATG---- 399
A+ G + ++ +F + R++VSWNT+I L A +L +M+ A+G
Sbjct: 412 ARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETML 471
Query: 400 -----------IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID 448
P+++T + LL C G+ + + + D+ + L+D
Sbjct: 472 EGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKE-IHGYAVRHALESDLAVGSALVD 530
Query: 449 LLGRAGKLLEAEEYTKKFP 467
+ + G L A + P
Sbjct: 531 MYAKCGCLALARAVFDRLP 549
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 140/304 (46%), Gaps = 33/304 (10%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++ +L C++++ ++H V+K + + V N ++++YA+ G+M A +F +
Sbjct: 368 TMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMI 427
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL-----------------------LPNE 100
R++VSW+ +I+G G A + +M L +PN
Sbjct: 428 DLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNN 487
Query: 101 YIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGE 160
+ + CA + + +G++IH Y+++ S VG++L+ MY K G + A V+
Sbjct: 488 ITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDR 547
Query: 161 AFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG-LLPDRFSFAGGLEICSVSNDLRK 219
N++++N LI + + ++ +F M+ G P+ +F L CS S + +
Sbjct: 548 LPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDR 607
Query: 220 GM-ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIE-----EKDLISWNTF 273
G+ + + E P++ ++ + + G ++A+ +I E + +W+T
Sbjct: 608 GLELFQGMKRDYGFEPTPYLHACVVDVLGR---AGRLDEAYGIISSMAPGEHQVSAWSTM 664
Query: 274 IAAC 277
+ AC
Sbjct: 665 LGAC 668
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 172/524 (32%), Positives = 288/524 (54%), Gaps = 26/524 (4%)
Query: 70 SWSAMISGHHQAGEHLLALEFFSQMH--LLPNEYIFAS---AISACAGIQSLVKGQQIHA 124
SW+ I G+ L A+ F QM + P + AS A+ +CAG+ +HA
Sbjct: 14 SWAYQIRMAASQGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHA 73
Query: 125 YSLKFGYASISFVGNSLISMYMKV----------GYSSDALL----------VYGEAFEP 164
+++ G + F N+L+++ +K+ G S + L V+ E E
Sbjct: 74 LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLER 133
Query: 165 NLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILH 224
+ VS+N LI G E+++ ++ + + M R G +PD F+ + L I + D+++GM++H
Sbjct: 134 DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVH 193
Query: 225 CLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYE 284
+K +++ FVG++++ +Y+ + + K F + D + WN+ +A + E
Sbjct: 194 GYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVE 253
Query: 285 KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNAL 344
+ L +F+ M GVRP TF+S++ A L+ ++ GKQ+HA+LIR R N ++ + ++L
Sbjct: 254 EALGIFRRMLQ-AGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSL 312
Query: 345 VNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDS 404
++MY KCG + + ++FN + ++VSW +I +A H A LFE+M+ +KP+
Sbjct: 313 IDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNH 372
Query: 405 VTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTK 464
+TF+ +LTAC+HAGLV G YFNSM YG P +EH L D LGRAG L EA +
Sbjct: 373 ITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFIS 432
Query: 465 KFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGD 524
+ + V TLL ACR+ ++ V+ E +AK++F L+P + +V+LSN+Y++ G W +
Sbjct: 433 EMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNE 492
Query: 525 VAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
A RK ++ G+KKEP+ S IEV+ F + SH I
Sbjct: 493 AAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRI 536
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 193/419 (46%), Gaps = 30/419 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKC------------- 50
S+ + L C+ SLHA ++ G D +N +LNL K
Sbjct: 51 SLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPS 110
Query: 51 --GKMILA-----RKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNE 100
G + A RKVFDEM ER+ VSW+ +I G + H AL +M +P+
Sbjct: 111 GEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDT 170
Query: 101 YIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGE 160
+ ++ + A + +G +H Y++K G+ + FVG+SLI MY ++ V+
Sbjct: 171 FTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDS 230
Query: 161 AFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKG 220
+ + V +N+++AG+ +N E+ +F+ ML+ G+ P +F+ + + LR G
Sbjct: 231 FSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLG 290
Query: 221 MILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHC 280
LH ++ + N F+ ++++ +Y K + A + F I+ D++SW I +
Sbjct: 291 KQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALH 350
Query: 281 ADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG-KQIHAHLIRMRLNQDVG 339
+ +F+ M + V+P+ TF ++L AC+ V +G K ++ + +
Sbjct: 351 GPTTEAFVLFERMELGN-VKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLE 409
Query: 340 VGNALVNMYAKCGLISCSYKLFNEMLHRNVVS-WNTIIAA---HANHRLGGS-ALKLFE 393
AL + + G + +Y +EM + S W+T++ A H N L A K+FE
Sbjct: 410 HCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFE 468
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 183/592 (30%), Positives = 305/592 (51%), Gaps = 41/592 (6%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYA--KCGKMILARKVFDEMS 64
S+L C K+L Q + A ++ G+ + ++ ++ A + ++ ++ +
Sbjct: 62 SILERC---KSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRIK 118
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQ 120
E N+ SW+A I G+ ++G+ + +M L P+ + + + C G S G
Sbjct: 119 ELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGL 178
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+ + LKFG+ FV N+ I+M + G S A V+ ++ +LV++N++I G V+
Sbjct: 179 GVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRG 238
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHC--------------- 225
+ +++K M + + P+ + G + CS DL G HC
Sbjct: 239 LAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTN 298
Query: 226 ----LTVKC-----------KLESNPFVGNTIMAL-YSKFNLIGEAEKAFRLIEEKDLIS 269
+ VKC + V T M L Y++F + A + I EK ++
Sbjct: 299 ALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVP 358
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
WN I+ C ++ L++F EM + PD T + L+AC+ L ++ G IH ++
Sbjct: 359 WNAIISGCVQAKQGKEALALFHEM-QIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYI 417
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
R +L+ DV +G ALV+MYAKCG I+ + ++F E+ RN ++W +I A H AL
Sbjct: 418 ERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDAL 477
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
F +M GI PD +TF+G+L+AC H GLV+EG YF+ M + +SP ++H++C++DL
Sbjct: 478 SYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDL 537
Query: 450 LGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPY 509
LGRAG L EAEE K P+ D VLG L ACR+ +V IGER A +L + P + Y
Sbjct: 538 LGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNY 597
Query: 510 VLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFS 561
VLL+++Y+ MW + ARK++ D G++K P S++E+ G +F + +
Sbjct: 598 VLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSLVEINGIVHEFVLPPYD 649
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 187/606 (30%), Positives = 315/606 (51%), Gaps = 36/606 (5%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+++ LL CS K L+ +HA ++ G+ V+ +L+L + G + A +FD+
Sbjct: 40 QTLHHLLDQCSSMKRLKL---VHAQIILHGLAAQVVTLGKLLSLCVQEGDLRYAHLLFDQ 96
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
+ + N ++ +I G+ + + + +L F QM +PN++ F + ACA +
Sbjct: 97 IPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWEA 156
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+HA ++K G + V N++++ Y+ A V+ + + +VS+N++IAG+ +
Sbjct: 157 VIVHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSKM 216
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
++ +F+ ML+ G+ D F+ L S +L G +H V +E + V
Sbjct: 217 GFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVT 276
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH-- 297
N ++ +Y+K + A+ F + +KD++SW + + A ++ E + +F M +
Sbjct: 277 NALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNVV 336
Query: 298 ----------------------------GVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
GV PDD T SIL+ C+ + GKQ H ++
Sbjct: 337 SWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAHCYI 396
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
+ V + N+L++MYAKCG + + +F M +NVVSWN II A A H G A+
Sbjct: 397 CDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEAI 456
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
++F+ M+A+G+ PD +TF GLL+AC+H+GLV G YF+ M T+ ISP +EH+ C++DL
Sbjct: 457 EMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMISTFRISPGVEHYACMVDL 516
Query: 450 LGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPY 509
LGR G L EA +K P+ D +V G LL ACR+ ++ I +++ KQL L + Y
Sbjct: 517 LGRGGFLGEAMTLIQKMPVKPDVVVWGALLGACRIYGNLEIAKQIMKQLLELGRFNSGLY 576
Query: 510 VLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEIN 569
VLLSN+Y+ W D+ RK++ DSG+KK + S IE+ G +F V + H I
Sbjct: 577 VLLSNMYSESQRWDDMKKIRKIMDDSGIKKCRAISFIEIDGCCYQFMVDDKRHCASTGIY 636
Query: 570 YMLKTL 575
+L L
Sbjct: 637 SILDQL 642
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 178/574 (31%), Positives = 312/574 (54%), Gaps = 5/574 (0%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
++L+ C+ T++L+ G+ +H +L+ G + DV V ++N+Y KCG + A F + R
Sbjct: 111 AILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHR 170
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIH 123
++VSW+AMI+ Q + LA + +M L +PN+ + +A L +G+ I+
Sbjct: 171 DVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIY 230
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ S V NS ++M+ G DA ++ + + ++V++N +I +V+N+
Sbjct: 231 SLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFG 290
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ +F + + G+ + +F L + + L KG ++H L + + + V +M
Sbjct: 291 EAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALM 350
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+LY + G+A K F + KD+I+W A + ++ L +F+EM + G RP
Sbjct: 351 SLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLE-GRRPTS 409
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T ++L CA LA++Q G+QIH+H+I ++ V AL+NMY KCG ++ + +F +
Sbjct: 410 ATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEK 469
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
M R+++ WN+++ A+A H L+LF QM+ G K D+V+F+ +L+A +H+G V +G
Sbjct: 470 MAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDG 529
Query: 424 EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP-LGQDPIVLGTLLSAC 482
YF +M + + I+P E + C++DLLGRAG++ EA + K D I+ TLL AC
Sbjct: 530 YQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGAC 589
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
R + A+Q+ P+ + YV+LSN+YA+ G W V RK+++ G+KKEP
Sbjct: 590 RTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPG 649
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
S IE+ +F + SH + I L L+
Sbjct: 650 RSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLN 683
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/479 (27%), Positives = 253/479 (52%), Gaps = 8/479 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+LL CS K + G +H V G + + +V H++ +YA+CG + A++VF+ + +
Sbjct: 10 ALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERK 69
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
++ +W+ MI + Q G++ AL F QM ++P + + + ++ACA +SL G +IH
Sbjct: 70 DVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIH 129
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
L+ G+ FVG +LI+MY K G A + ++VS+ A+IA V++ Q
Sbjct: 130 GQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFA 189
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+++ M G++P++ + + L +G ++ L +ES+ V N+ M
Sbjct: 190 LARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAM 249
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
++ L+G+A + F + ++D+++WN I ++ + + +F + D G++ +D
Sbjct: 250 NMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQD-GIKAND 308
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
TF +L L S+ GK IH + ++DV V AL+++Y +C ++K+F +
Sbjct: 309 ITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVD 368
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH-AGLVKE 422
M ++V++W + A+A + AL+LF++M+ G +P S T + +L C H A L K
Sbjct: 369 MGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKG 428
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+ + + +E + + +E T LI++ G+ GK+ EA +K +D +V ++L A
Sbjct: 429 RQIHSHIIENGFRMEMVVE--TALINMYGKCGKMAEARSVFEKMA-KRDILVWNSMLGA 484
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 177/355 (49%), Gaps = 2/355 (0%)
Query: 98 PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV 157
P+ F + + C+ +++ G+++H + G+ + V LI MY + G +A V
Sbjct: 3 PDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 62
Query: 158 YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDL 217
+ ++ ++ +I + + ++ +F M + ++P + ++ L C+ + L
Sbjct: 63 FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 122
Query: 218 RKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC 277
+ GM +H ++ E + FVG ++ +Y+K + A +F+ +E +D++SW IAAC
Sbjct: 123 KDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAAC 182
Query: 278 SHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD 337
+ +++ M D GV P+ T ++ A + GK I++ + + D
Sbjct: 183 VQHDQFALARWLYRRMQLD-GVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESD 241
Query: 338 VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA 397
V V N+ +NM+ GL+ + +LF +M+ R+VV+WN +I + + G A++LF +++
Sbjct: 242 VRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQ 301
Query: 398 TGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
GIK + +TF+ +L + +G+ + + K G D+ T L+ L GR
Sbjct: 302 DGIKANDITFVLMLNVYTSLTSLAKGKV-IHELVKEAGYDRDVVVATALMSLYGR 355
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 131/263 (49%), Gaps = 2/263 (0%)
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKA 258
PD F L+ CS + ++ G +H E N V ++ +Y++ + EA++
Sbjct: 3 PDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 62
Query: 259 FRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
F ++E KD+ +W I DY++ L +F +M + V P T+ +IL ACA S
Sbjct: 63 FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQM-QEEDVMPTKVTYVAILNACASTES 121
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA 378
++ G +IH +++ DV VG AL+NMY KCG + ++ F + HR+VVSW +IAA
Sbjct: 122 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 181
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISP 438
H A L+ +M+ G+ P+ +T + A + EG+ + S+ + +
Sbjct: 182 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGK-FIYSLVSSRVMES 240
Query: 439 DIEHFTCLIDLLGRAGKLLEAEE 461
D+ +++ G AG L +A
Sbjct: 241 DVRVMNSAMNMFGNAGLLGDARR 263
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 93/184 (50%), Gaps = 4/184 (2%)
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+PD F ++L C+ +V HG+++H H+ Q+ V L+ MYA+CG + + +
Sbjct: 2 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F + ++V +W +I + AL +F QM+ + P VT++ +L AC
Sbjct: 62 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 121
Query: 420 VKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
+K+G E + +++ G D+ T LI++ + G + A + K+ +D + +
Sbjct: 122 LKDGMEIHGQILQQ--GFEGDVFVGTALINMYNKCGSVRGAWDSFKRLE-HRDVVSWTAM 178
Query: 479 LSAC 482
++AC
Sbjct: 179 IAAC 182
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L C+ ALQ+G +H+ +++ G + +++V ++N+Y KCGKM AR VF++M
Sbjct: 411 TLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKM 470
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
++R+++ W++M+ + Q G + L+ F+QM L + F S +SA + S+ G
Sbjct: 471 AKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGY 530
Query: 121 Q 121
Q
Sbjct: 531 Q 531
>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
Length = 716
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 176/545 (32%), Positives = 290/545 (53%), Gaps = 5/545 (0%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+S L C ++ G SLH +K+G D V N ++++YAK + ARKVF+ +
Sbjct: 169 LSLALKACIRSAEYSYGRSLHCDAIKVG-GADGFVMNSLVDMYAKAEDLECARKVFERIP 227
Query: 65 ERNLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQ 121
+RN+VSW++MISG Q G + LL Q ++ P+EY A+ I+AC+ + L +G+
Sbjct: 228 DRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVITACSALFGLHQGRW 287
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H +K G S SF+ +L+ MY+K G A V+ E +LV + +I G+ +N
Sbjct: 288 MHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQNGN 347
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
P +F + P+ + A L + DL G +H L VK L VGN
Sbjct: 348 PLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEYNVVGNA 407
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y+K + EA++ F I KD+++WN+ I+ + + L +FK+MS G P
Sbjct: 408 LVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDDALMLFKQMSL-QGSSP 466
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D + + L+A L + GK IH + ++ ++ V AL+N+Y KCG + + ++F
Sbjct: 467 DAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDTALLNLYNKCGDLLSARRVF 526
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+EM RN V+W +I + ++ LF +M G+ P+ + F +L+ C+H+G+V
Sbjct: 527 DEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTSILSTCSHSGMVT 586
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
G+ YF+SM + + I+P ++H+ C++D+L RAG L +A E+ P+ D V G L
Sbjct: 587 AGKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEFIDNMPMQADTSVWGAFLHG 646
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
C L + E K++ L P YVL+SNLY S+GMW R+ +++ GL K P
Sbjct: 647 CELHSRLQFAEEAIKRMMVLHPERPDLYVLISNLYTSNGMWDKSLAIRRWMQEKGLVKLP 706
Query: 542 SYSMI 546
S +
Sbjct: 707 GCSSV 711
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 169/324 (52%), Gaps = 4/324 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I++++ CS L QG +H +V+K G+ + +S +L++Y KCG++ AR VFDE+
Sbjct: 268 TIATVITACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFDEL 327
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQ---MHLLPNEYIFASAISACAGIQSLVKGQ 120
S +LV W+ MI G+ Q G L AL F ++ PN A+ +SA A ++ L G+
Sbjct: 328 SYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGK 387
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IH ++K G + VGN+L+ MY K S+A ++G ++V++N++I+G+ EN
Sbjct: 388 SIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENN 447
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ +FK M QG PD S L DL G +H VK SN +V
Sbjct: 448 MGDDALMLFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDT 507
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ LY+K + A + F + +++ ++W I D + +F EM D GV
Sbjct: 508 ALLNLYNKCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKD-GVY 566
Query: 301 PDDFTFASILAACAGLASVQHGKQ 324
P+D F SIL+ C+ V GK+
Sbjct: 567 PNDIAFTSILSTCSHSGMVTAGKR 590
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 210/427 (49%), Gaps = 13/427 (3%)
Query: 43 VLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL------ 96
+L+ YA G + AR VFD + S+ AM+ Q H A+ M
Sbjct: 103 LLSCYAALGDLASARMVFDGTPRPDAYSYGAMLWCLVQTERHADAVALHHDMRRRRPCPE 162
Query: 97 LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALL 156
++++ + A+ AC G+ +H ++K G A FV NSL+ MY K A
Sbjct: 163 AQDDFVLSLALKACIRSAEYSYGRSLHCDAIKVGGAD-GFVMNSLVDMYAKAEDLECARK 221
Query: 157 VYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSND 216
V+ + N+VS+ ++I+G V+N G +F M + + P ++ A + CS
Sbjct: 222 VFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVITACSALFG 281
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
L +G +H +K L SN F+ ++ +Y K + A F + DL+ W T I
Sbjct: 282 LHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVG 341
Query: 277 CSHCADYEKGLSVF--KEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRL 334
+ + L +F K +N + P+ T A++L+A A L + GK IH +++ L
Sbjct: 342 YTQNGNPLDALRLFLDKRFAN---IAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGL 398
Query: 335 NQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQ 394
+ VGNALV+MYAKC +S + ++F + +++VV+WN++I+ +A + +G AL LF+Q
Sbjct: 399 VEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDDALMLFKQ 458
Query: 395 MKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
M G PD+++ + L+A G + G++ K +S +I T L++L + G
Sbjct: 459 MSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVS-NIYVDTALLNLYNKCG 517
Query: 455 KLLEAEE 461
LL A
Sbjct: 518 DLLSARR 524
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 131/314 (41%), Gaps = 52/314 (16%)
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
+G++L L + KL ++ Y+ + A F D S+ +
Sbjct: 90 QGLLLGSLRARTKL----------LSCYAALGDLASARMVFDGTPRPDAYSYGAMLWCLV 139
Query: 279 HCADYEKGLSVFKEMSNDHGVRP-----DDFTFASILAACAGLASVQHGKQIHAHLIRMR 333
+ +++ +M RP DDF + L AC A +G+ +H I++
Sbjct: 140 QTERHADAVALHHDMRRR---RPCPEAQDDFVLSLALKACIRSAEYSYGRSLHCDAIKVG 196
Query: 334 LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFE 393
D V N+LV+MYAK + C+ K+F + RNVVSW ++I+ + L LF
Sbjct: 197 -GADGFVMNSLVDMYAKAEDLECARKVFERIPDRNVVSWTSMISGCVQNGFASDGLLLFN 255
Query: 394 QMKATGIKPDSVTFIGLLTACN-----------HAGLVKEG---EAYFN-SMEKTYGISP 438
+M+ + P T ++TAC+ H ++K+G ++ + ++ Y
Sbjct: 256 KMRQDNVPPSEYTIATVITACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCG 315
Query: 439 DIEHFTCLIDLLG---------------RAGKLLEAEE--YTKKFP-LGQDPIVLGTLLS 480
+++H C+ D L + G L+A K+F + + + T+LS
Sbjct: 316 ELDHARCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLS 375
Query: 481 ACRLRRDVVIGERL 494
A RD+ +G+ +
Sbjct: 376 ASAQLRDLSLGKSI 389
>gi|225441321|ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 739
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 182/563 (32%), Positives = 314/563 (55%), Gaps = 14/563 (2%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
++ G ++H +KMG DV N +L +Y KCG + A K+FDEM+ R+LVSW+++ISG
Sbjct: 166 VEYGETVHCVAMKMGFGQDVYFGNTMLEVYVKCGSIGNASKLFDEMTHRDLVSWTSIISG 225
Query: 78 HHQAGEHLLALEFFSQMHLL--PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS 135
+ + F++M + PN + AC+ +S+ +G+++H+Y +K G+
Sbjct: 226 YIYGESFSRGFKLFNKMRMEMEPNSVTMVVMLQACSAFESVNEGRELHSYVIKKGFMVDR 285
Query: 136 FVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
V NS++ MY K G S + + + E E +++S+N LIA + + E F M R
Sbjct: 286 SVQNSILRMYTKTGGSGEEVETFFSEIEERDIISWNILIAFYSFRGDIAEVAERFNEMRR 345
Query: 195 QGLLPDRFSFAGGLEICSVSN--DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI 252
+ + L + +++N +L +G +LHC +K L + ++ALY+K +
Sbjct: 346 EVTSSIE---SLTLVVSAIANCANLSEGGMLHCSAIKTGLHDTVLM-TCLLALYAKCGAL 401
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
+ + FR I ++ I+W++ ++ + +++ + ++++M G++P+ ++++ A
Sbjct: 402 EISAQLFRDIPHRNSITWSSMMSGFTQNGFFKEAIELYQQMLAS-GLQPNHDIISTLVIA 460
Query: 313 CAGLASVQHGKQIHAHLIR----MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
L ++Q GK HA IR + +L+NMY +CG IS + FN ++ ++
Sbjct: 461 YTHLGALQLGKATHAFFIRNLSSWPEEDSAPLETSLLNMYIRCGSISSALICFNRVVVKD 520
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
VV+W ++I H L ALK F+ M + ++P+SVTF+ LL+AC+H+GLV+EG F+
Sbjct: 521 VVTWTSMIEGFGTHGLAFEALKFFKSMLESEVQPNSVTFLSLLSACSHSGLVREGCEVFH 580
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDV 488
SM+ + I PD+ H+TC++DLLGR+GKL EA K D + G LL+A R+ D
Sbjct: 581 SMKWGFRIEPDLNHYTCMVDLLGRSGKLKEALTVILKLVTCPDSRIWGALLAASRVHEDK 640
Query: 489 VIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEV 548
+GE A++L L+P Y L SN+ AS WG+V R+++ + LKK+P +S IEV
Sbjct: 641 KLGEYAAEKLLELEPDNVGYYTLWSNIEASLERWGEVEEVRRVMHERDLKKKPGWSCIEV 700
Query: 549 QGTFEKFTVAEFSHSKIGEINYM 571
+G F + SH ++ EI M
Sbjct: 701 KGMIHGFVSGDTSHHQVEEICKM 723
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 223/426 (52%), Gaps = 14/426 (3%)
Query: 6 SSLLHHCSKTKALQQGISLHAA-VLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
SSLLH C+ +AL++ +HA+ ++ G QP + V++ ++ LY++ A + +
Sbjct: 55 SSLLHSCNNLQALKR---IHASLIVSSGFQP-LSVASKLITLYSQLNDFRSAFSICNSFE 110
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVK-GQ 120
E N V W+++I H +G AL + +M L + + F A + V+ G+
Sbjct: 111 EPNTVIWNSIIKSHVDSGLFGYALLQYGRMRELGVAHDSFTFPIINQAIWSLGCRVEYGE 170
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H ++K G+ + GN+++ +Y+K G +A ++ E +LVS+ ++I+G++ +
Sbjct: 171 TVHCVAMKMGFGQDVYFGNTMLEVYVKCGSIGNASKLFDEMTHRDLVSWTSIISGYIYGE 230
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+GF++F M R + P+ + L+ CS + +G LH +K + V N
Sbjct: 231 SFSRGFKLFNKM-RMEMEPNSVTMVVMLQACSAFESVNEGRELHSYVIKKGFMVDRSVQN 289
Query: 241 TIMALYSKFNLIG-EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+I+ +Y+K G E E F IEE+D+ISWN IA S D + F EM +
Sbjct: 290 SILRMYTKTGGSGEEVETFFSEIEERDIISWNILIAFYSFRGDIAEVAERFNEMRREVTS 349
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+ T +++A A A++ G +H I+ L+ D + L+ +YAKCG + S +
Sbjct: 350 SIESLTL--VVSAIANCANLSEGGMLHCSAIKTGLH-DTVLMTCLLALYAKCGALEISAQ 406
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
LF ++ HRN ++W+++++ + A++L++QM A+G++P+ L+ A H G
Sbjct: 407 LFRDIPHRNSITWSSMMSGFTQNGFFKEAIELYQQMLASGLQPNHDIISTLVIAYTHLGA 466
Query: 420 VKEGEA 425
++ G+A
Sbjct: 467 LQLGKA 472
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 189/391 (48%), Gaps = 15/391 (3%)
Query: 95 HLLPNEYIFASAISACAGIQSLVKGQQIHA-YSLKFGYASISFVGNSLISMYMKVGYSSD 153
H L + ++S + +C +Q+L ++IHA + G+ +S V + LI++Y ++
Sbjct: 46 HYLTCSFPYSSLLHSCNNLQAL---KRIHASLIVSSGFQPLS-VASKLITLYSQLNDFRS 101
Query: 154 ALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAG-GLEICS 212
A + EPN V +N++I V++ + M G+ D F+F I S
Sbjct: 102 AFSICNSFEEPNTVIWNSIIKSHVDSGLFGYALLQYGRMRELGVAHDSFTFPIINQAIWS 161
Query: 213 VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNT 272
+ + G +HC+ +K + + GNT++ +Y K IG A K F + +DL+SW +
Sbjct: 162 LGCRVEYGETVHCVAMKMGFGQDVYFGNTMLEVYVKCGSIGNASKLFDEMTHRDLVSWTS 221
Query: 273 FIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
I+ + + +G +F +M + + P+ T +L AC+ SV G+++H+++I+
Sbjct: 222 IISGYIYGESFSRGFKLFNKMRME--MEPNSVTMVVMLQACSAFESVNEGRELHSYVIKK 279
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYK-LFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
D V N+++ MY K G + F+E+ R+++SWN +IA ++ +
Sbjct: 280 GFMVDRSVQNSILRMYTKTGGSGEEVETFFSEIEERDIISWNILIAFYSFRGDIAEVAER 339
Query: 392 FEQMKATGIKP-DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLL 450
F +M+ +S+T + ++A + + EG S KT G+ D TCL+ L
Sbjct: 340 FNEMRREVTSSIESLTLV--VSAIANCANLSEGGMLHCSAIKT-GLH-DTVLMTCLLALY 395
Query: 451 GRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+ G L + + + P ++ I +++S
Sbjct: 396 AKCGALEISAQLFRDIP-HRNSITWSSMMSG 425
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 208/437 (47%), Gaps = 34/437 (7%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKC-GKMILARKVFDEMSER 66
+L CS +++ +G LH+ V+K G D V N +L +Y K G F E+ ER
Sbjct: 256 MLQACSAFESVNEGRELHSYVIKKGFMVDRSVQNSILRMYTKTGGSGEEVETFFSEIEER 315
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYI--FASAISACAGIQSLVKGQQIHA 124
+++SW+ +I+ + G+ E F++M I +SA A +L +G +H
Sbjct: 316 DIISWNILIAFYSFRGDIAEVAERFNEMRREVTSSIESLTLVVSAIANCANLSEGGMLHC 375
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
++K G + + L+++Y K G + ++ + N ++++++++GF +N ++
Sbjct: 376 SAIKTGLHD-TVLMTCLLALYAKCGALEISAQLFRDIPHRNSITWSSMMSGFTQNGFFKE 434
Query: 185 GFEVFKLMLRQGLLPDR---------FSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
E+++ ML GL P+ ++ G L++ ++ + L+ + +S
Sbjct: 435 AIELYQQMLASGLQPNHDIISTLVIAYTHLGALQLGKATH----AFFIRNLSSWPEEDSA 490
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC-SHCADYEKGLSVFKEMS 294
P + +++ +Y + I A F + KD+++W + I +H +E L FK M
Sbjct: 491 P-LETSLLNMYIRCGSISSALICFNRVVVKDVVTWTSMIEGFGTHGLAFE-ALKFFKSML 548
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQI-HAHLIRMRLNQDVGVGNALVNMYAKCGL 353
V+P+ TF S+L+AC+ V+ G ++ H+ R+ D+ +V++ + G
Sbjct: 549 ESE-VQPNSVTFLSLLSACSHSGLVREGCEVFHSMKWGFRIEPDLNHYTCMVDLLGRSGK 607
Query: 354 ISCSYKLFNEMLH-RNVVSWNTIIAA---HANHRLGG-SALKLFEQMKATGIKPDSVTFI 408
+ + + +++ + W ++AA H + +LG +A KL E ++PD+V +
Sbjct: 608 LKEALTVILKLVTCPDSRIWGALLAASRVHEDKKLGEYAAEKLLE------LEPDNVGYY 661
Query: 409 GLLTACNHAGLVKEGEA 425
L + A L + GE
Sbjct: 662 TLWSNIE-ASLERWGEV 677
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 171/492 (34%), Positives = 286/492 (58%), Gaps = 12/492 (2%)
Query: 87 ALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYM 146
A++ L + ++ I C +++ +G I + G+ + F+ N LI+MY+
Sbjct: 48 AMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYV 107
Query: 147 KVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAG 206
K +DA ++ + + N++S+ +I+ + + + +K E+ LMLR + P+ ++++
Sbjct: 108 KFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSS 167
Query: 207 GLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK- 265
L C+ +D+R +LHC +K LES+ FV + ++ +++K +GE E A + +E
Sbjct: 168 VLRSCNGMSDVR---MLHCGIIKEGLESDVFVRSALIDVFAK---LGEPEDALSVFDEMV 221
Query: 266 --DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGK 323
D I WN+ I + + + L +FK M G + T S+L AC GLA ++ G
Sbjct: 222 TGDAIVWNSIIGGFAQNSRSDVALELFKRMKR-AGFIAEQATLTSVLRACTGLALLELGM 280
Query: 324 QIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR 383
Q H H+++ +QD+ + NALV+MY KCG + + ++FN+M R+V++W+T+I+ A +
Sbjct: 281 QAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG 338
Query: 384 LGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF 443
ALKLFE+MK++G KP+ +T +G+L AC+HAGL+++G YF SM+K YGI P EH+
Sbjct: 339 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY 398
Query: 444 TCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQP 503
C+IDLLG+AGKL +A + + D + TLL ACR++R++V+ E AK++ L P
Sbjct: 399 GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDP 458
Query: 504 TTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHS 563
Y LLSN+YA+ W V R ++D G+KKEP S IEV F + + SH
Sbjct: 459 EDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHP 518
Query: 564 KIGEINYMLKTL 575
+I E++ L L
Sbjct: 519 QIVEVSKKLNQL 530
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 207/417 (49%), Gaps = 19/417 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S L+ C +A+ +G + + G +P + + N ++N+Y K + A ++FD+M
Sbjct: 63 TYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQM 122
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+RN++SW+ MIS + + H ALE M ++ PN Y ++S + +C G+ + +
Sbjct: 123 PQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---R 179
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H +K G S FV ++LI ++ K+G DAL V+ E + + +N++I GF +N
Sbjct: 180 MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNS 239
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ + E+FK M R G + ++ + L C+ L GM H V K + + + N
Sbjct: 240 RSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV--KYDQDLILNN 297
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y K + +A + F ++E+D+I+W+T I+ + ++ L +F+ M + G +
Sbjct: 298 ALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSS-GTK 356
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRM----RLNQDVGVGNALVNMYAKCGLISC 356
P+ T +L AC+ ++ G + ++ + + G ++++ K G +
Sbjct: 357 PNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYG---CMIDLLGKAGKLDD 413
Query: 357 SYKLFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
+ KL NEM + V+W T++ A R L + K + P+ LL+
Sbjct: 414 AVKLLNEMECEPDAVTWRTLLGACRVQR--NMVLAEYAAKKVIALDPEDAGTYTLLS 468
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 185/564 (32%), Positives = 297/564 (52%), Gaps = 14/564 (2%)
Query: 19 QQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGH 78
+ G +H + G ++++ ++++ +Y K ++ ARKVFD M E++ + W+ MISG+
Sbjct: 136 RAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGY 195
Query: 79 HQAGEHLLALEFFSQMHLLPNE-------YIFASAISACAGIQSLVKGQQIHAYSLKFGY 131
+ ++ +++ F L NE + A A +Q L G QIH+ + K G
Sbjct: 196 RKNEMYVESIQVFRD---LINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGC 252
Query: 132 ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKL 191
S +V IS+Y K G ++ E +P++V++NA+I G+ N + E +FK
Sbjct: 253 YSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKE 312
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
++ G R + + + VS L +H +K S+ V + +YSK N
Sbjct: 313 LMLSGA---RLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNE 369
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
I A K F EK L SWN I+ + E +S+F+EM P+ T IL+
Sbjct: 370 IESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSE-FSPNPVTITCILS 428
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
ACA L ++ GK +H + + V AL+ MYAKCG I+ + +LF+ M +N V+
Sbjct: 429 ACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVT 488
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
WNT+I+ + H G AL +F +M +GI P VTF+ +L AC+HAGLVKEG+ FNSM
Sbjct: 489 WNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMI 548
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
YG P ++H+ C++D+LGRAG L A ++ + + V TLL ACR+ +D +
Sbjct: 549 HRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLA 608
Query: 492 ERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGT 551
++++LF L P +VLLSN++++D + A R+ K L K P Y++IE+ T
Sbjct: 609 RTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGET 668
Query: 552 FEKFTVAEFSHSKIGEINYMLKTL 575
FT + SH ++ EI L+ L
Sbjct: 669 PHVFTSGDQSHPQVKEIYEKLEKL 692
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 211/461 (45%), Gaps = 14/461 (3%)
Query: 25 HAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEH 84
HA ++ G + D+ + + + G + AR +F + ++ ++ ++ G
Sbjct: 40 HAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESP 99
Query: 85 LLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
+L F+ + L PN +A AISA +G + G+ IH ++ G S +G++
Sbjct: 100 HSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSN 159
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP- 199
++ MY K DA V+ E + + +N +I+G+ +N+ + +VF+ ++ +
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
D + L + +LR GM +H L K S+ +V ++LYSK I F
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALF 279
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
R + D++++N I + + E LS+FKE+ G R T S++ L +
Sbjct: 280 REFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS-GARLRSSTLVSLVPVSGHLMLI 338
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
IH + ++ V AL +Y+K I + KLF+E +++ SWN +I+ +
Sbjct: 339 Y---AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
+ L A+ LF +M+ + P+ VT +L+AC G + G+ + + + ++
Sbjct: 396 TQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGK-WVHDLVRSTDFESS 454
Query: 440 IEHFTCLIDLLGRAGKLLEAEE----YTKKFPLGQDPIVLG 476
I T LI + + G + EA TKK + + ++ G
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISG 495
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 3/122 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I+ +L C++ AL G +H V + + VS ++ +YAKCG + AR++FD M
Sbjct: 422 TITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM 481
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+++N V+W+ MISG+ G+ AL F +M + P F + AC+ + +G
Sbjct: 482 TKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGD 541
Query: 121 QI 122
+I
Sbjct: 542 EI 543
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 194/558 (34%), Positives = 295/558 (52%), Gaps = 10/558 (1%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
LHA + G D V++ + LY + ARKVFD + + V W+ +++G +G
Sbjct: 145 LHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAG--LSGS 202
Query: 84 HLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
ALE F +M + P+ AS + A A + + G+ +HA+ K G A V
Sbjct: 203 E--ALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVT 260
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
LIS+Y K G A ++ P+LV++NALI+G+ N E+FK ++ GL P
Sbjct: 261 GLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRP 320
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
+ + + S LH VK L++N V + LY +FN + A +AF
Sbjct: 321 SSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAF 380
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+ EK + SWN I+ + E +++F++M VRP+ T +S L+ACA L ++
Sbjct: 381 DAMPEKTMESWNAMISGYAQNGLTEMAVALFQQM-QALNVRPNPLTISSALSACAQLGAL 439
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
GK +H + +L +V V AL++MY KCG I+ + +F+ M ++NVVSWN +I+ +
Sbjct: 440 SLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGY 499
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
H G ALKL++ M + P S TF+ +L AC+H GLVKEG F SM YGI+P
Sbjct: 500 GLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPG 559
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQ-DPIVLGTLLSACRLRRDVVIGERLAKQL 498
IEH TC++DLLGRAG+L EA E +FP P + G LL AC + +D + + +++L
Sbjct: 560 IEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQKL 619
Query: 499 FHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVA 558
F L+P T YVLLSNLY S + + A R+ K L K P ++IE+ F
Sbjct: 620 FELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFMAG 679
Query: 559 EFSHSKIGEINYMLKTLS 576
+ +H + I L+ L+
Sbjct: 680 DRAHPQSDAIYLYLEKLT 697
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 196/426 (46%), Gaps = 27/426 (6%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ +++S+L ++ G +HA K G+ V +++LYAKCG M AR +FD
Sbjct: 221 STTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFD 280
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQ---MHLLPNEYIFASAISACAGIQSLVK 118
M +LV+++A+ISG+ G ++E F + M L P+ + I +
Sbjct: 281 RMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPL 340
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+HA+ +K G + + V +L ++Y + A + E + S+NA+I+G+ +
Sbjct: 341 AGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQ 400
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N E +F+ M + P+ + + L C+ L G +H + KLE N +V
Sbjct: 401 NGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYV 460
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++ +Y K I EA F ++ K+++SWN I+ + L ++K+M + H
Sbjct: 461 MTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAH- 519
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG------NALVNMYAKCG 352
+ P TF S+L AC+ V+ G + + D G+ +V++ + G
Sbjct: 520 LHPTSSTFLSVLYACSHGGLVKEGTTVF-----RSMTSDYGITPGIEHCTCMVDLLGRAG 574
Query: 353 LISCSYKLFNEMLHRNVVS--WNTIIAAHANHRLGG----SALKLFEQMKATGIKPDSVT 406
+ +++L +E V W ++ A H+ G ++ KLFE ++P++
Sbjct: 575 QLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQKLFE------LEPENTG 628
Query: 407 FIGLLT 412
+ LL+
Sbjct: 629 YYVLLS 634
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 19/225 (8%)
Query: 301 PDDFTFA----SILAACA--GLASVQHG----KQIHAHLIRMRLNQDVGVGNALVNMYAK 350
PD F+FA S+ ++C+ G++ + +HA + D V +AL +Y
Sbjct: 111 PDSFSFAFAATSLASSCSRGGISPPSAASAALRPLHALAVASGFAADNFVASALAKLYFT 170
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG-IKPDSVTFIG 409
+ + K+F+ + + V WNT++A + G AL+ F +M G ++PDS T
Sbjct: 171 LSRGNDARKVFDAVPSPDTVLWNTLLAGLS----GSEALEAFVRMAGAGSVRPDSTTLAS 226
Query: 410 LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLG 469
+L A G EK G++ T LI L + G + A + G
Sbjct: 227 VLPAAAEVANTTMGRCVHAFGEKC-GLAQHEHVVTGLISLYAKCGDMECARHLFDRME-G 284
Query: 470 QDPIVLGTLLSACRLRRDVVIGERLAKQL--FHLQPTTTSPYVLL 512
D + L+S + V L K+L L+P++++ L+
Sbjct: 285 PDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALI 329
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 185/610 (30%), Positives = 322/610 (52%), Gaps = 41/610 (6%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
I +L+ + ++ K+ Q LHA ++ S V+++Y + A +F +
Sbjct: 8 IKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASI-VISIYTNLKLLHEALLLFKTLK 66
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQ 121
+++W ++I AL F +M P+ +F S + +C + L G+
Sbjct: 67 SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGES 126
Query: 122 IHAYSLKFGYASISFVGNSLISMYMK---------VGYSSD------------------A 154
+H + ++ G + GN+L++MY K VG D
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETC 186
Query: 155 LLVYG-----EAFE----PNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA 205
++ +G FE ++VS+N +IAG+ ++ E + + M L PD F+ +
Sbjct: 187 IMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLS 246
Query: 206 GGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK 265
L I S D+ KG +H ++ ++S+ ++G++++ +Y+K I ++E+ F + +
Sbjct: 247 SVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCR 306
Query: 266 DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
D ISWN+ +A Y + L +F++M V+P F+S++ ACA LA++ GKQ+
Sbjct: 307 DGISWNSLVAGYVQNGRYNEALRLFRQMVTAK-VKPGAVAFSSVIPACAHLATLHLGKQL 365
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
H +++R ++ + +ALV+MY+KCG I + K+F+ M + VSW II HA H G
Sbjct: 366 HGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHG 425
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
A+ LFE+MK G+KP+ V F+ +LTAC+H GLV E YFNSM K YG++ ++EH+
Sbjct: 426 HEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAA 485
Query: 446 LIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTT 505
+ DLLGRAGKL EA + K + V TLLS+C + +++ + E++A+++F +
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSEN 545
Query: 506 TSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKI 565
YVL+ N+YAS+G W ++A R ++ GL+K+P+ S IE++ F + SH +
Sbjct: 546 MGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSM 605
Query: 566 GEINYMLKTL 575
+IN LK +
Sbjct: 606 DKINEFLKAV 615
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 118/212 (55%), Gaps = 3/212 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+L S+ + +G +H V++ GI DV + + ++++YAK ++ + +VF +
Sbjct: 244 TLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL 303
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
R+ +SW+++++G+ Q G + AL F QM + P F+S I ACA + +L G+
Sbjct: 304 YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGK 363
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H Y L+ G+ S F+ ++L+ MY K G A ++ + VS+ A+I G +
Sbjct: 364 QLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHG 423
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
+ +F+ M RQG+ P++ +F L CS
Sbjct: 424 HGHEAVSLFEEMKRQGVKPNQVAFVAVLTACS 455
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + SS++ C+ L G LH VL+ G ++ +++ ++++Y+KCG + ARK+FD
Sbjct: 343 AVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFD 402
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGI 113
M+ + VSW+A+I GH G A+ F +M + PN+ F + ++AC+ +
Sbjct: 403 RMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHV 457
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 212/702 (30%), Positives = 328/702 (46%), Gaps = 129/702 (18%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQP-------------------------- 35
A++ SLL S + QG LHA ++K G
Sbjct: 21 AQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVK 80
Query: 36 -----DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE------- 83
D++VSN +++ Y + G ++ AR +FDEM ERN VSWSA+ISG + G
Sbjct: 81 EFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWY 140
Query: 84 ------------------------HLLALEFFSQM---HLLPNEYIFASAISACAGIQSL 116
+ AL+ F ++ + PN+ F S + AC +
Sbjct: 141 FERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDF 200
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISM-------------------------------Y 145
G I +K G+ V NSLI++ Y
Sbjct: 201 GLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAY 260
Query: 146 MKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA 205
++ G +A ++ E E N +S++A+IA + ++ E+ ++F M+++G P+ FA
Sbjct: 261 VETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFA 320
Query: 206 GGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK 265
L + L G+ +H K ++ + F+G++++ LY K + F LI EK
Sbjct: 321 CTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEK 380
Query: 266 DLISWN-------------------------------TFIAACSHCADYEKGLSVFKEMS 294
+++ WN T IA EK L VF +
Sbjct: 381 NVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLL 440
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
G P+ TF+S+L ACA +AS+ G +H +I++ + D+ VG AL +MYAKCG I
Sbjct: 441 VS-GQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDI 499
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG-IKPDSVTFIGLLTA 413
S ++F M +N +SW +I A +L LFE+M+ T + P+ + + +L A
Sbjct: 500 GSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFA 559
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C+H GLV +G YFNSMEK YGI P +H+TC++DLL R+G+L EAEE+ + P +
Sbjct: 560 CSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEAN 619
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
LLS C+ +D I ER AK+L+ L ++ YVLLSN+YAS G W DV+ RK+++
Sbjct: 620 AWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMR 679
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ GLKK S +EV+ F + SHS+ EI L+ L
Sbjct: 680 EKGLKKSGGCSWVEVRNQVHSFYSEDGSHSQSNEIYGTLQLL 721
>gi|297734798|emb|CBI17032.3| unnamed protein product [Vitis vinifera]
Length = 694
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 186/555 (33%), Positives = 303/555 (54%), Gaps = 19/555 (3%)
Query: 20 QGISLHAAVLKMGIQPD--VIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
G +LH +L D + ++NHV+N+YAKCG + A + FDEM ERN+VSW+A++S
Sbjct: 71 HGPALHCHMLLHNPNSDFNLFLTNHVVNMYAKCGLLDYAHQWFDEMLERNIVSWTALVSR 130
Query: 78 HHQAGEHLLALEFFSQMHLL--PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS 135
+ Q G F+ M + P E+ FAS IS G G+Q+HA ++K + S
Sbjct: 131 YAQHGWPDECFRVFTDMLICHRPTEFAFASVISTSGGDGDC--GRQVHALAVKTSFDSCV 188
Query: 136 FVGNSLISMYMK-VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
+VGN LI MY + G + +A VY NLVS+N +I GF + E+F M
Sbjct: 189 YVGNVLIMMYCRSCGGTDEAWNVYEAMGFRNLVSWNFMITGFQVCGCGNRALEIFSQMHF 248
Query: 195 QGLLPDRFSFAGGLE-ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
G+ DR + +C + + L L CLT K S V ++ YS +L G
Sbjct: 249 GGIRFDRATLVNIFSCLCGMGDGLECCFQLQCLTTKTGFISEIEVPTGLVKAYS--SLGG 306
Query: 254 EAEKAFRLIEE----KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
E +R+ E +D++SW IA + D E+ +F++ + + PD F+ +
Sbjct: 307 EVNDCYRIFLELDGRQDVVSWTGIIAVFAE-RDPEEAFLLFRQFLRE-CLAPDRHMFSIV 364
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
L ACAGLA+ H + +H++++ D+ + NAL++ A+CG ++ S + F+++ R+
Sbjct: 365 LKACAGLATEGHALTVQSHVLKVGFEDDIVLTNALIHTCARCGSVALSKQAFDKIGSRDT 424
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNS 429
VSWN+++ A+A H G AL+LF QM A +PD TF+ L++AC+HAG+V+EG F +
Sbjct: 425 VSWNSMLKAYAMHGQGKEALQLFSQMDA---QPDGATFVALISACSHAGMVEEGAKIFEA 481
Query: 430 MEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVV 489
M +GI P ++H+ C++D+LGRAG++ EA+E K P+ D +V LL CR +
Sbjct: 482 MSNNHGIVPQLDHYACMVDILGRAGRIYEAKELIDKMPMEPDSMVWSALLGGCRKHGETK 541
Query: 490 IGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQ 549
+ A +L L P + Y+L+SN+++++G + + R+ ++ ++KEP S I+V
Sbjct: 542 FAKLAAVKLKELDPNNSLGYILMSNIFSTNGHFNEARLIRREMERKTVRKEPGLSWIQVG 601
Query: 550 GTFEKFTVAEFSHSK 564
+F H +
Sbjct: 602 NQVHEFASGGQQHPE 616
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 92/173 (53%), Gaps = 2/173 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
S +L C+ +++ + VLK+G + D++++N +++ A+CG + L+++ FD++
Sbjct: 361 FSIVLKACAGLATEGHALTVQSHVLKVGFEDDIVLTNALIHTCARCGSVALSKQAFDKIG 420
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQI-H 123
R+ VSW++M+ + G+ AL+ FSQM P+ F + ISAC+ + +G +I
Sbjct: 421 SRDTVSWNSMLKAYAMHGQGKEALQLFSQMDAQPDGATFVALISACSHAGMVEEGAKIFE 480
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIAG 175
A S G ++ + + G +A L+ EP+ + ++AL+ G
Sbjct: 481 AMSNNHGIVPQLDHYACMVDILGRAGRIYEAKELIDKMPMEPDSMVWSALLGG 533
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 190/604 (31%), Positives = 315/604 (52%), Gaps = 56/604 (9%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMI-LARKVFDE 62
S+ S + H K L+ S+H V K G + DV+V +LN Y K M+ A K F+
Sbjct: 228 SVLSAVRHLGKPGILE---SIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEG 284
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL--LPNEYIFASAISACAGIQSL-VKG 119
M+ RN +WS +I+ QAG A + + L +P+ + ++ I +
Sbjct: 285 MAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRIDDAKILF 344
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
QIH ++ +S+ N++I+ YM+ +A ++ N +S+ +IAG+ N
Sbjct: 345 DQIHEPNV------VSW--NAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARN 396
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ E+ + + R+G+LP S CS L G +H L VK + N +V
Sbjct: 397 GRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVC 456
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N ++ LY K+ IG + F + KD +S+N+F++A +++ VF M +
Sbjct: 457 NALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPS---- 512
Query: 300 RPDDFTFASILAACA-----------------------------------GLASVQHGKQ 324
PD ++ +I++ACA L + Q G+Q
Sbjct: 513 -PDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQ 571
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
IH I++ ++ + V NALV+MY KC S K+F+ M R++ +WNTII +A H L
Sbjct: 572 IHTIAIKLGMDSGLVVANALVSMYFKCSSAD-SLKVFDSMEERDIFTWNTIITGYAQHGL 630
Query: 385 GGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFT 444
G A+++++ M + G+ P+ VTF+GLL AC+H+GLV EG +F SM YG++P +EH+
Sbjct: 631 GREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYA 690
Query: 445 CLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPT 504
C++DLLGRAG + AE + P+ D ++ LL AC++ ++V IG R A++LF ++P+
Sbjct: 691 CMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPS 750
Query: 505 TTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSK 564
YV+LSN+Y+S GMW +VA RK++K+ G+ K+P S ++++ F + H +
Sbjct: 751 NAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKNKMHSFVTGDEEHEQ 810
Query: 565 IGEI 568
I I
Sbjct: 811 IQNI 814
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 178/396 (44%), Gaps = 27/396 (6%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH 95
D+I N ++ Y G R + D +S NL + + ++SG+ +AG A F M
Sbjct: 63 DIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLSGYARAGRVRDARRVFDGMG 122
Query: 96 LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVG--NSLISMYMKVGYSSD 153
+ + ++ A + V+ I F V N++++ Y +
Sbjct: 123 V-------RNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEE 175
Query: 154 ALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSV 213
A ++ E N VS+ +I+G+V +Q + +++F+ ML +G+ P++ + + + S
Sbjct: 176 ARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNL---VSVLSA 232
Query: 214 SNDLRKGMIL---HCLTVKCKLESNPFVGNTIMALYSK-FNLIGEAEKAFRLIEEKDLIS 269
L K IL H L K E + VG I+ Y+K N++ A K F + ++ +
Sbjct: 233 VRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYT 292
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
W+T IAA S + +V++ R + S + GLA ++G+ A +
Sbjct: 293 WSTIIAALSQAGRIDDAFAVYQ--------RDPLKSVPSRTSMLTGLA--RYGRIDDAKI 342
Query: 330 IRMRLNQ-DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
+ ++++ +V NA++ Y + ++ + LFN M RN +SW +IA +A + A
Sbjct: 343 LFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQA 402
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
L + + G+ P + AC++ ++ G+
Sbjct: 403 LVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGK 438
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/358 (20%), Positives = 143/358 (39%), Gaps = 58/358 (16%)
Query: 147 KVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM----LRQG-LLPDR 201
++G +A V+ +++++N++I + N P+ G + + LR G +L
Sbjct: 45 RLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLSG 104
Query: 202 FSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRL 261
++ AG + D R+ + + V+ N N ++ Y + I A K F
Sbjct: 105 YARAGRVR------DARR--VFDGMGVR-----NTVAWNAMVTCYVQNGDITLARKLFDA 151
Query: 262 IEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR--------------------- 300
+ +D+ SWNT + H E+ ++F+ M +GV
Sbjct: 152 MPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMF 211
Query: 301 ---------PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK- 350
P+ S+L+A L + IH + + +DV VG A++N Y K
Sbjct: 212 RTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKD 271
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGL 410
++ + K F M RN +W+TIIAA + A ++++ + + +
Sbjct: 272 VNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVP----SRTSM 327
Query: 411 LTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
LT G + + + F+ + + P++ + +I + + EAE+ + P
Sbjct: 328 LTGLARYGRIDDAKILFDQIHE-----PNVVSWNAMITGYMQNEMVDEAEDLFNRMPF 380
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 21/169 (12%)
Query: 340 VGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG 399
G L++ YA+ G + + ++F+ M RN V+WN ++ + + A KLF+ M +
Sbjct: 97 TGTILLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSR- 155
Query: 400 IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIE-HFTCLIDLLGRAGKLLE 458
D ++ +LT H+ L++E F M + G+S + LI+ GRA +
Sbjct: 156 ---DVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFR 212
Query: 459 A---EEYTKKFP-----------LGQDPIV--LGTLLSACRLRRDVVIG 491
E T + P LG+ I+ + L+ RDVV+G
Sbjct: 213 TMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVG 261
>gi|356557599|ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
mitochondrial-like [Glycine max]
Length = 601
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 180/537 (33%), Positives = 294/537 (54%), Gaps = 16/537 (2%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G LH LK G + +VSN ++ +Y K + AR+VFD M R+ ++W+++I+G+
Sbjct: 70 GTQLHCLALKTGSHSETVVSNSIITMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYLH 129
Query: 81 AGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSL---KFGYASI 134
G ALE + ++LL P + AS +S C G+QIHA + + G +
Sbjct: 130 NGYLEEALEALNDVYLLGLVPKPELLASVVSMCGRRMGSKIGRQIHALVVVNERIGQSM- 188
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
F+ +L+ Y + G S AL V+ N+VS+ +I+G + +Q ++ F F+ M
Sbjct: 189 -FLSTALVDFYFRCGDSLMALRVFDGMEVKNVVSWTTMISGCIAHQDYDEAFACFRAMQA 247
Query: 195 QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGE 254
+G+ P+R + L C+ ++ G +H + ES P + ++ +Y + GE
Sbjct: 248 EGVCPNRVTSIALLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSSALVNMYCQ---CGE 304
Query: 255 AEKAFRLIEE----KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
LI E +D++ W++ I + S D K L +F +M + + P+ T +++
Sbjct: 305 PMHLAELIFEGSSFRDVVLWSSIIGSFSRRGDSFKALKLFNKMRTEE-IEPNYVTLLAVI 363
Query: 311 AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVV 370
+AC L+S++HG +H ++ + + VGNAL+NMYAKCG ++ S K+F EM +R+ V
Sbjct: 364 SACTNLSSLKHGCGLHGYIFKFGFCFSISVGNALINMYAKCGCLNGSRKMFLEMPNRDNV 423
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSM 430
+W+++I+A+ H G AL++F +M G+KPD++TF+ +L+ACNHAGLV EG+ F +
Sbjct: 424 TWSSLISAYGLHGCGEQALQIFYEMNERGVKPDAITFLAVLSACNHAGLVAEGQRIFKQV 483
Query: 431 EKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVI 490
I IEH+ CL+DLLGR+GKL A E + P+ + +L+SAC+L + I
Sbjct: 484 RADCEIPLTIEHYACLVDLLGRSGKLEYALEIRRTMPMKPSARIWSSLVSACKLHGRLDI 543
Query: 491 GERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIE 547
E LA QL +P Y LL+ +YA G W D R+ +K LKK +S IE
Sbjct: 544 AEMLAPQLIRSEPNNAGNYTLLNTIYAEHGHWLDTEQVREAMKLQKLKKCYGFSRIE 600
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 195/400 (48%), Gaps = 8/400 (2%)
Query: 87 ALEFFSQMHLLPNE---YIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLIS 143
L+ FS++HL + + S I A + Q G Q+H +LK G S + V NS+I+
Sbjct: 35 TLQLFSELHLCGHSSISFFLPSVIKASSSAQCHTFGTQLHCLALKTGSHSETVVSNSIIT 94
Query: 144 MYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFS 203
MY K A V+ + +++N+LI G++ N E+ E + GL+P
Sbjct: 95 MYFKFSDVGSARQVFDTMPHRDPITWNSLINGYLHNGYLEEALEALNDVYLLGLVPKPEL 154
Query: 204 FAGGLEICSVSNDLRKGMILHCL-TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLI 262
A + +C + G +H L V ++ + F+ ++ Y + A + F +
Sbjct: 155 LASVVSMCGRRMGSKIGRQIHALVVVNERIGQSMFLSTALVDFYFRCGDSLMALRVFDGM 214
Query: 263 EEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG 322
E K+++SW T I+ C DY++ + F+ M + GV P+ T ++L+ACA V+HG
Sbjct: 215 EVKNVVSWTTMISGCIAHQDYDEAFACFRAMQAE-GVCPNRVTSIALLSACAEPGFVKHG 273
Query: 323 KQIHAHLIRMRLNQDVGVGNALVNMYAKCG-LISCSYKLFNEMLHRNVVSWNTIIAAHAN 381
K+IH + R +ALVNMY +CG + + +F R+VV W++II + +
Sbjct: 274 KEIHGYAFRHGFESCPSFSSALVNMYCQCGEPMHLAELIFEGSSFRDVVLWSSIIGSFSR 333
Query: 382 HRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIE 441
ALKLF +M+ I+P+ VT + +++AC + +K G + K +G I
Sbjct: 334 RGDSFKALKLFNKMRTEEIEPNYVTLLAVISACTNLSSLKHGCGLHGYIFK-FGFCFSIS 392
Query: 442 HFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
LI++ + G L + + + P +D + +L+SA
Sbjct: 393 VGNALINMYAKCGCLNGSRKMFLEMP-NRDNVTWSSLISA 431
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 7/116 (6%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C+ +L+ G LH + K G + V N ++N+YAKCG + +RK+F EM R+ V+W
Sbjct: 366 CTNLSSLKHGCGLHGYIFKFGFCFSISVGNALINMYAKCGCLNGSRKMFLEMPNRDNVTW 425
Query: 72 SAMIS--GHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
S++IS G H GE AL+ F +M+ + P+ F + +SAC + +GQ+I
Sbjct: 426 SSLISAYGLHGCGEQ--ALQIFYEMNERGVKPDAITFLAVLSACNHAGLVAEGQRI 479
>gi|356533824|ref|XP_003535458.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 630
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 183/587 (31%), Positives = 313/587 (53%), Gaps = 14/587 (2%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+S+ LL C ++ + HA +L G + ++ +++ YA CG++ +R VF+
Sbjct: 29 QSLLHLLQLCIDLRSQKLAQQSHAQILANGFAQNAFLATRLVSAYATCGELATSRFVFES 88
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
+ +++ W+++I+G+ + + AL F +M +LP++Y A+ ++ LV G
Sbjct: 89 VEAKSVYLWNSLINGYVKNHDFRQALALFREMGRNGMLPDDYTLATVFKVFGELEDLVSG 148
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF--V 177
+ IH ++ G+ S VGNSL+SMY + G DA+ V+ E N+ SFN +I+G +
Sbjct: 149 KLIHGKGIRIGFVSDVVVGNSLMSMYCRCGEFGDAVKVFDETPHRNVGSFNVVISGCAAL 208
Query: 178 ENQQPEKGFEVFKLMLR---QGLLPDRFSFAGGLEIC-SVSNDLRKGMILHCLTVK---- 229
EN ++ LR +G D F+ A L +C + G LHC VK
Sbjct: 209 ENCNFTSHDDLSNFFLRMQCEGFKADAFTVASLLPVCCGDTGKWDYGRELHCYVVKNGLD 268
Query: 230 CKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSV 289
K++S+ +G++++ +YS+ + + F ++ +++ W I + L +
Sbjct: 269 LKMDSDVHLGSSLIDMYSRSKKVVLGRRVFDQMKNRNVYVWTAMINGYVQNGAPDDALVL 328
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
+ M G+RP+ + S L AC LA + GKQIH I+M LN DV + NAL++MY+
Sbjct: 329 LRAMQMKDGIRPNKVSLISALPACGLLAGLIGGKQIHGFSIKMELNDDVSLCNALIDMYS 388
Query: 350 KCGLISCSYKLFNEMLH-RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
KCG + + + F + ++ ++W+++I+A+ H G A+ + +M G KPD +T +
Sbjct: 389 KCGSLDYARRAFETSSYFKDAITWSSMISAYGLHGRGEEAIIAYYKMLQQGFKPDMITVV 448
Query: 409 GLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
G+L+AC+ +GLV EG + + S+ Y I P +E C++D+LGR+G+L +A E+ K+ PL
Sbjct: 449 GVLSACSKSGLVDEGISIYKSLMTKYEIKPTVEICACVVDMLGRSGQLDQALEFIKEMPL 508
Query: 469 GQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGA 528
P V G+LL+A + + + + L L+P S Y+ LSN YASD W V
Sbjct: 509 DPGPSVWGSLLTASVIHGNSRTRDLAYRHLLELEPENPSNYISLSNTYASDRRWDVVTEV 568
Query: 529 RKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
R ++K+ GLKK P S I + G F+VA+ +H I ML L
Sbjct: 569 RTIMKERGLKKVPGCSWITISGKTHSFSVADKAHPSSSLIYEMLGDL 615
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 181/579 (31%), Positives = 311/579 (53%), Gaps = 10/579 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYA--KCGKMILARKVFD 61
S+ L HC+ +Q HA +L+ + + + S+ +++ A G + ARK+F
Sbjct: 13 SVDFLKTHCTSISKTKQA---HALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFT 69
Query: 62 EMSERNLVSWSAMISGH--HQAGEHLLALEFFSQMHLLP-NEYIFASAISACAGIQSLVK 118
+M + + MI G+ Q ++L +F +P + Y + ++ACA + ++
Sbjct: 70 QMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKL 129
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G++ H LK G+ S FV N+LI Y G A V+ E+ ++V++N +I +
Sbjct: 130 GRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLN 189
Query: 179 NQQPEKGFEVFKLMLR-QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
EK F++ M + L PD + + C+ +L +G LH + + L+ N
Sbjct: 190 KGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLR 249
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N I+ +Y K + I A++ F I EKD++SW + ++ + +++ L++F++M +
Sbjct: 250 VNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNK 309
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
+ D+ T +L+ACA ++ GK IH + + +N D+ + ALV+MYAKCG I +
Sbjct: 310 -IELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLA 368
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++F M RNV +WN +I A H G A+ LF+QM+ + PD VTFI LL AC+HA
Sbjct: 369 LQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHA 428
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV EG A F +M+ + I P +EH+ C++DLL RA K+ +A + + P+ + ++ T
Sbjct: 429 GLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWAT 488
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL ACR + E++ +++ L+P + YV+LSNLYA W RK +K+ G+
Sbjct: 489 LLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGI 548
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
+K P S IE+ G +F + SH + +I M++ ++
Sbjct: 549 EKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMT 587
>gi|255559100|ref|XP_002520572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540232|gb|EEF41805.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 186/567 (32%), Positives = 317/567 (55%), Gaps = 17/567 (2%)
Query: 24 LHAAVLKMGIQ--PDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQA 81
L+ +LK+G + D+ V + +++YA+ G + L RKVFD E++ W+ MI GH Q
Sbjct: 122 LYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNTMIGGHIQN 181
Query: 82 GEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
L + F Q H + ++ F SA++A + +Q L GQQ+HA+++K V
Sbjct: 182 NSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAFTMKNHTVLSVTV 241
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
N+++ MY + + V+ + E ++VS+N +I+GF++N E+G + M +QG
Sbjct: 242 LNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLMLVYEMQKQGF 301
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
+ D + L S + G H ++ ++ + + + ++ +Y+K LI +++
Sbjct: 302 IADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFDG-MDSYLIDMYAKSGLIRISQR 360
Query: 258 AFRL--IEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
F I+ +D +WN IA + E+ F+ M + +RP+ T ASIL AC+
Sbjct: 361 VFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLML-EQNLRPNAVTLASILPACSS 419
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
L S+ GKQ+H IR L+Q++ V ALV+MY+K G I+ + +F + RN V++ T+
Sbjct: 420 LGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVFTQSSERNSVTYTTM 479
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYG 435
I + H +G +AL LF MK +GI+PD++TF+ +L+AC++AGLV EG F SM++ +
Sbjct: 480 ILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYAGLVDEGLRIFESMKRDFK 539
Query: 436 ISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL---GTLLSACRLRRDVVIGE 492
I P H+ C+ D+LGR G+++EA E+ K+ LG++ V+ G+LL ACRL + +GE
Sbjct: 540 IQPSTAHYCCVADMLGRVGRVIEAYEFVKQ--LGEEGHVIEIWGSLLGACRLHGHIELGE 597
Query: 493 RLAKQLFHLQPTT--TSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQG 550
++ +L + VLLSN+YA + W V RK +++ GL+KE S I+ G
Sbjct: 598 EVSNRLLEMNSVDRLAGYQVLLSNMYAEEANWETVDKLRKSMREKGLRKEVGCSWIDTGG 657
Query: 551 TFEKFTVAEFSHSKIGEINYMLKTLSL 577
+F + H++ EI ML+ L++
Sbjct: 658 LLVRFVSKDKDHTRCEEIYEMLERLAM 684
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 137/496 (27%), Positives = 230/496 (46%), Gaps = 48/496 (9%)
Query: 55 LARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
L KVF M +R++++W+ M+S + + ++ A+ F M + P+ F + A +
Sbjct: 52 LLHKVFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVNVFPAIS 111
Query: 112 GIQSLVKGQQIHAYSLKFG--YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSF 169
+ ++ LK G YA+ FV +S ISMY ++G V+ E + +
Sbjct: 112 SVGDFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVW 171
Query: 170 NALIAGFVENQQPEKGFEVF-KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV 228
N +I G ++N +G +F + M + + D +F L S L G +H T+
Sbjct: 172 NTMIGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAFTM 231
Query: 229 KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLS 288
K + V N I+ +YS+ N + + + F + EKD++SWNT I+ E+GL
Sbjct: 232 KNHTVLSVTVLNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLM 291
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMY 348
+ EM G D T S+L+A + L + + GKQ HA+LIR + D G+ + L++MY
Sbjct: 292 LVYEMQK-QGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFD-GMDSYLIDMY 349
Query: 349 AKCGLISCSYKLF--NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVT 406
AK GLI S ++F N + +R+ +WN +IA + + L A F M ++P++VT
Sbjct: 350 AKSGLIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVT 409
Query: 407 FIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE----- 461
+L AC+ G + G+ + + Y + +I T L+D+ ++G + AE
Sbjct: 410 LASILPACSSLGSINLGKQ-LHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVFTQS 468
Query: 462 -------YT----------------------KKFPLGQDPIVLGTLLSACRLRRDVVIGE 492
YT KK + D I +LSAC V G
Sbjct: 469 SERNSVTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYAGLVDEGL 528
Query: 493 RL---AKQLFHLQPTT 505
R+ K+ F +QP+T
Sbjct: 529 RIFESMKRDFKIQPST 544
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 169/336 (50%), Gaps = 19/336 (5%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S L S+ + L G +HA +K V V N +L +Y++C + + +VF++M E+
Sbjct: 209 SALTAVSQLQCLGLGQQMHAFTMKNHTVLSVTVLNAILVMYSRCNSVQTSFEVFEKMPEK 268
Query: 67 NLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
++VSW+ MISG Q G E L+ + + + + S +SA + +++ G+Q H
Sbjct: 269 DVVSWNTMISGFIQNGLDEEGLMLVYEMQKQGFIADSVTVTSLLSAASNLRNREIGKQTH 328
Query: 124 AYSLKFGYASISFVG--NSLISMYMKVGYSSDALLVYGEAFEPNLV------SFNALIAG 175
AY ++ G I F G + LI MY K G + + FE N + ++NA+IAG
Sbjct: 329 AYLIRHG---IKFDGMDSYLIDMYAKSGL----IRISQRVFENNNIQNRDQATWNAVIAG 381
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+ +N E+ F F+LML Q L P+ + A L CS + G LH ++++ L+ N
Sbjct: 382 YTQNGLVEQAFITFRLMLEQNLRPNAVTLASILPACSSLGSINLGKQLHGVSIRYSLDQN 441
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
FV ++ +YSK I AE F E++ +++ T I E LS+F M
Sbjct: 442 IFVRTALVDMYSKSGAINYAESVFTQSSERNSVTYTTMILGYGQHGMGENALSLFHSMKK 501
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
G++PD TF ++L+AC+ V G +I + R
Sbjct: 502 S-GIQPDAITFVAVLSACSYAGLVDEGLRIFESMKR 536
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 153/300 (51%), Gaps = 13/300 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD-- 61
+++SLL S + + G HA +++ GI+ D + S +++++YAK G + ++++VF+
Sbjct: 307 TVTSLLSAASNLRNREIGKQTHAYLIRHGIKFDGMDS-YLIDMYAKSGLIRISQRVFENN 365
Query: 62 EMSERNLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVK 118
+ R+ +W+A+I+G+ Q G + + + +L PN AS + AC+ + S+
Sbjct: 366 NIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVTLASILPACSSLGSINL 425
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+Q+H S+++ FV +L+ MY K G + A V+ ++ E N V++ +I G+ +
Sbjct: 426 GKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVFTQSSERNSVTYTTMILGYGQ 485
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPF 237
+ E +F M + G+ PD +F L CS + + +G+ I + K++ +
Sbjct: 486 HGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYAGLVDEGLRIFESMKRDFKIQPSTA 545
Query: 238 VGNTIMALYSKFNLIGEA-EKAFRLIEEKDLIS-WNTFIAACSHCADYEKGLSVFKEMSN 295
+ + + + EA E +L EE +I W + + AC E G +E+SN
Sbjct: 546 HYCCVADMLGRVGRVIEAYEFVKQLGEEGHVIEIWGSLLGACRLHGHIELG----EEVSN 601
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A +++S+L CS ++ G LH ++ + ++ V ++++Y+K G + A VF
Sbjct: 407 AVTLASILPACSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVFT 466
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
+ SERN V+++ MI G+ Q G AL F M + P+ F + +SAC+
Sbjct: 467 QSSERNSVTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACS 519
>gi|255562697|ref|XP_002522354.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538432|gb|EEF40038.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 704
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 184/580 (31%), Positives = 320/580 (55%), Gaps = 13/580 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +SLL C + G +LH VL+ G D+ V +L +Y+ CG + A KVF
Sbjct: 112 TFTSLLQVCCLLEDWFLGSTLHGQVLQFGYVNDICVQTMLLGMYSDCGDLESACKVFGYA 171
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
E++ V W++MISG+ + +L F +M + ++ + A++AC+ + +G+
Sbjct: 172 VEKDDVFWNSMISGYLKNDRIKESLSLFGEMVRSGTIFTQFTCSMALNACSKLGYYSQGR 231
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IHA + S + N+L+ MY G AL ++ P+L+S+N++I+ F +N+
Sbjct: 232 IIHAQVIVSNILPDSALQNALLDMYYSCGDRRTALTLFSRIQIPSLISWNSMISWFAKNE 291
Query: 181 QPEKGFEVF-KLMLRQGLLPDRFSFAGGLEICSVSNDLRK---GMILHCLTVKCKLESNP 236
+ EK +F KL+ PD ++F I S + + R G LH +K L+ +
Sbjct: 292 EGEKAMGLFVKLLGMSTCKPDEYTFTA---IISATGEFRATDYGQPLHAQVIKAGLQWSV 348
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
F+GN ++++Y + + + A F L+EEKD++ W I D E + +F +M +
Sbjct: 349 FIGNALLSMYFRNSDVEAARGVFSLMEEKDVVLWTEMIMGHCRLGDGESAIKLFCKMRQE 408
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
G + D F + L+ CA LA ++ G+ +H ++ ++ V +LV+MYAK G +
Sbjct: 409 -GHKSDSFALSGALSVCADLAILKQGQMLHTQAVKTGCEAEISVCGSLVDMYAKNGNLQA 467
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ +F+++ + ++ WN++I +++H + A+ LF ++ G+ PD VTF+ LL+ACNH
Sbjct: 468 AQLIFSQVCNPDLKCWNSMIGGYSHHGMAEEAVMLFAEVLECGLTPDQVTFLSLLSACNH 527
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
+GLV++G+ ++ M+K GI+P +H++C++ LL RAG L EAEE + ++ + L
Sbjct: 528 SGLVEKGKFLWDYMKKN-GITPGPKHYSCMVSLLSRAGLLDEAEELITESTCSEEHLKLW 586
Query: 477 -TLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
TLLS+C RR++ +G R AKQ+ L P ++ Y+LLSNLYA G W VA RK ++
Sbjct: 587 RTLLSSCVNRRNLTVGARAAKQVLRLDPEDSATYILLSNLYAVTGRWDGVAELRKKIRGL 646
Query: 536 GLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
L+K+P S IE + F+ + S+ I E ++ L
Sbjct: 647 MLEKDPGVSWIEAKNDIHVFSSDDQSNPVIDEAQAEVRRL 686
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 231/464 (49%), Gaps = 9/464 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVS----NHVLNLYAKCGKMILARKVF 60
+ +L+ C+ +L++ LHA +L S N+++ +YA CG A+K+F
Sbjct: 7 LEALIKKCTTINSLKKARQLHALILATTASTSYAQSPYLNNNLIAMYAHCGSRSDAQKLF 66
Query: 61 DEMSERNLVSWSAMISGH-HQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSL 116
D M +N +S++A+I+ + + L+ + FS M L PN F S + C ++
Sbjct: 67 DRMPRKNAISYNALIAAYCRDSSYETLSFKLFSDMGIQRLRPNGATFTSLLQVCCLLEDW 126
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G +H L+FGY + V L+ MY G A V+G A E + V +N++I+G+
Sbjct: 127 FLGSTLHGQVLQFGYVNDICVQTMLLGMYSDCGDLESACKVFGYAVEKDDVFWNSMISGY 186
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
++N + ++ +F M+R G + +F+ + L CS +G I+H + + +
Sbjct: 187 LKNDRIKESLSLFGEMVRSGTIFTQFTCSMALNACSKLGYYSQGRIIHAQVIVSNILPDS 246
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
+ N ++ +Y A F I+ LISWN+ I+ + + EK + +F ++
Sbjct: 247 ALQNALLDMYYSCGDRRTALTLFSRIQIPSLISWNSMISWFAKNEEGEKAMGLFVKLLGM 306
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
+PD++TF +I++A + +G+ +HA +I+ L V +GNAL++MY + +
Sbjct: 307 STCKPDEYTFTAIISATGEFRATDYGQPLHAQVIKAGLQWSVFIGNALLSMYFRNSDVEA 366
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ +F+ M ++VV W +I H G SA+KLF +M+ G K DS G L+ C
Sbjct: 367 ARGVFSLMEEKDVVLWTEMIMGHCRLGDGESAIKLFCKMRQEGHKSDSFALSGALSVCAD 426
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
++K+G+ KT G +I L+D+ + G L A+
Sbjct: 427 LAILKQGQMLHTQAVKT-GCEAEISVCGSLVDMYAKNGNLQAAQ 469
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 188/615 (30%), Positives = 325/615 (52%), Gaps = 50/615 (8%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNL--YAKCGKMILARKVFDEMS 64
+L C+ K L+Q +HA +L+ D ++ + ++ + ARKVFD++
Sbjct: 144 ALFQQCTSFKQLKQ---IHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIP 200
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQ 120
+ NL SW+ +I + + + ++ F +M PN++ F I A A + + G+
Sbjct: 201 QPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGK 260
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG--EAFEPNLVSFNALIAGFVE 178
+H ++K + FV NSLI Y G+ A LV+ E ++VS+N+++ GFV+
Sbjct: 261 AVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQ 320
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDL-----------RKGMILHC-- 225
P+K ++F+ M +G+ P+ + + C+ + +L R M+++
Sbjct: 321 GGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNV 380
Query: 226 ------LTVKC-----------KLESNPFVG-NTIMALYSKFNLIGEAEKAFRLIEEKDL 267
+ VKC +E V TI+ Y+K + G A F + KD+
Sbjct: 381 CNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDI 440
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEMS-NDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
+WN I+ ++ L++F+E+ G RPD T S L+ACA L ++ G+ IH
Sbjct: 441 PAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIH 500
Query: 327 AHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGG 386
++ + R+ + + +L++MY+K G + + ++F+ + +++V W+ +IA A H G
Sbjct: 501 GYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGE 560
Query: 387 SALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCL 446
+A++LF M+ T +KP+SVTF LL AC+H+GLV EG+ F+ ME+ YG+ P +H++C+
Sbjct: 561 AAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCM 620
Query: 447 IDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTT 506
+D+LGRAG L EA ++ + PL V G LL AC + ++ + E+ +L ++P
Sbjct: 621 VDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNH 680
Query: 507 SPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSH---- 562
YVLLSNLYA G W V+ R+ ++DSGLKKE S IE+ GT +F V + +H
Sbjct: 681 GAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSR 740
Query: 563 ---SKIGEINYMLKT 574
+K+ EI L++
Sbjct: 741 DIYAKLDEIMARLRS 755
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 114/255 (44%), Gaps = 36/255 (14%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++ S++ C+KT L G + + + + ++ V N ++++ KCG++ +AR +FD
Sbjct: 343 AVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFD 402
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH-------------------------- 95
M +R++VSW+ +I G+ + EH +A + F M
Sbjct: 403 NMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAI 462
Query: 96 ----------LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMY 145
P++ S +SACA + ++ G+ IH Y K + SLI MY
Sbjct: 463 FRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMY 522
Query: 146 MKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA 205
K G A+ V+ ++ ++A+IAG + + E E+F M + P+ +F
Sbjct: 523 SKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFT 582
Query: 206 GGLEICSVSNDLRKG 220
L CS S + +G
Sbjct: 583 NLLCACSHSGLVDEG 597
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 166/492 (33%), Positives = 285/492 (57%), Gaps = 3/492 (0%)
Query: 85 LLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISM 144
L L+ + L P +++ ++ C ++ L +G+ IHA+ + + N +++M
Sbjct: 90 LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNM 149
Query: 145 YMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSF 204
Y K G +A ++ + ++VS+ LI+G+ ++ Q + +F ML G P+ F+
Sbjct: 150 YAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTL 209
Query: 205 AGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE 264
+ L+ G LH ++K + N VG++++ +Y+++ + EA+ F +
Sbjct: 210 SSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAA 269
Query: 265 KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ 324
K+++SWN IA + + E + +F +M G P FT++S+LA CA S++ GK
Sbjct: 270 KNVVSWNALIAGHARKGEGEHVMRLFXQMLR-QGFEPTHFTYSSVLA-CASSGSLEQGKW 327
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
+HAH+I+ +GN L++MYAK G I + K+F ++ +++VSWN+II+ +A H L
Sbjct: 328 VHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGL 387
Query: 385 GGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFT 444
G AL+LFEQM ++P+ +TF+ +LTAC+H+GL+ EG+ YF M+K + I + H
Sbjct: 388 GAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK-HKIEAQVAHHV 446
Query: 445 CLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPT 504
++DLLGRAG+L EA ++ ++ P+ V G LL ACR+ +++ +G A+Q+F L P
Sbjct: 447 TVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPH 506
Query: 505 TTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSK 564
+ P+VLLSN+YAS G D A RKM+K+SG+KKEP+ S +E++ F + SH
Sbjct: 507 DSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPM 566
Query: 565 IGEINYMLKTLS 576
EI M + +S
Sbjct: 567 REEIQRMWEKIS 578
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 222/396 (56%), Gaps = 10/396 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S +L+ C+ + L+QG ++HA + + D+++ N +LN+YAKCG + A+ +FD+M
Sbjct: 109 SKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPT 168
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM-HL--LPNEYIFASAISACAGIQSLVKGQQI 122
+++VSW+ +ISG+ Q+G+ AL F +M HL PNE+ +S + A S G+Q+
Sbjct: 169 KDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQL 228
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
HA+SLK+GY VG+SL+ MY + + +A +++ N+VS+NALIAG +
Sbjct: 229 HAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEG 288
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E +F MLRQG P F+++ L C+ S L +G +H +K + ++GNT+
Sbjct: 289 EHVMRLFXQMLRQGFEPTHFTYSSVLA-CASSGSLEQGKWVHAHVIKSGGQPIAYIGNTL 347
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y+K I +A+K FR + ++D++SWN+ I+ + + L +F++M V+P+
Sbjct: 348 IDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKA-KVQPN 406
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+ TF S+L AC+ + G+ + + ++ V +V++ + G ++ + K
Sbjct: 407 EITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIE 466
Query: 363 EM-LHRNVVSWNTIIAA---HANHRLG-GSALKLFE 393
EM + W ++ A H N LG +A ++FE
Sbjct: 467 EMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFE 502
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 149/281 (53%), Gaps = 11/281 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SSLL + G LHA LK G +V V + +L++YA+ M A+ +F+ +
Sbjct: 208 TLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSL 267
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ +N+VSW+A+I+GH + GE + F QM P + ++S + ACA SL +G+
Sbjct: 268 AAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGK 326
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+HA+ +K G I+++GN+LI MY K G DA V+ + ++VS+N++I+G+ ++
Sbjct: 327 WVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHG 386
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ ++F+ ML+ + P+ +F L CS S L +G L K K+E+
Sbjct: 387 LGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHV 446
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLIS----WNTFIAAC 277
T++ L + + EA K IEE + W + AC
Sbjct: 447 TVVDLLGRAGRLNEANK---FIEEMPIKPTAAVWGALLGAC 484
>gi|357440905|ref|XP_003590730.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479778|gb|AES60981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 627
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 181/564 (32%), Positives = 306/564 (54%), Gaps = 13/564 (2%)
Query: 25 HAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEH 84
H+ +L + ++ +++ YA G I+++ VFD + +N+ W+++I+G+ + +
Sbjct: 49 HSQILTNCFSQNAFLTTRLISAYATFGDSIMSKLVFDSVHTKNVYLWNSLINGYVKNHQF 108
Query: 85 LLALEFFSQMH--LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLI 142
A+ F QM LLP++Y A+ IQ LV G+ IH SL+ G+ S VGNS++
Sbjct: 109 DNAIVLFRQMGRCLLPDDYTLATISKVSGEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVM 168
Query: 143 SMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF-----VENQQPEKGFEVFKLMLRQGL 197
SMY++ DA+ V+ E + N+ SFN +I+G ++ + F+ M QG
Sbjct: 169 SMYIRCREFGDAMKVFDEMPQRNVGSFNVIISGCAALGNLDYSLYADLWNFFRRMQCQGY 228
Query: 198 LPDRFSFAGGLEICSVSN-DLRKGMILHCLTVKCKLE----SNPFVGNTIMALYSKFNLI 252
D F+ A L +C S+ G LHC VK L+ S+ +G++++ +YS+ N +
Sbjct: 229 NADAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKL 288
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
+ + F ++ +++ W I E L +F+EM +RP+ + S+L A
Sbjct: 289 VLSRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALILFREMQRKDRIRPNRVSLVSVLPA 348
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF-NEMLHRNVVS 371
C L + GKQ+HA I+M N + + NAL++MYAKCG + + ++F N ++ ++
Sbjct: 349 CGLLVGLMGGKQVHAFSIKMEFNDYISLRNALIDMYAKCGSLDYARRVFDNGSYSKDAIT 408
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
W++II+A+ H G AL + +M GIKPD +T +G+L+AC +GLV EG + +NS+
Sbjct: 409 WSSIISAYGLHGKGQEALTTYYEMLQQGIKPDMITVVGVLSACCRSGLVDEGISIYNSLT 468
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
Y + P +E C++DLLGR+G+L +A ++ ++ P+ P V G+LL+A + + +
Sbjct: 469 TEYEMKPSVEICGCVVDLLGRSGQLDQALDFIREMPIIPGPSVWGSLLTASVIHGNSMTR 528
Query: 492 ERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGT 551
+ + L L+P S Y+ LSN YAS W ++ R M+K+ GL+K P S I +
Sbjct: 529 DLAYRCLLELEPENPSNYISLSNTYASSRRWDEITEVRSMMKERGLRKVPGISWITISDK 588
Query: 552 FEKFTVAEFSHSKIGEINYMLKTL 575
FTVA+ H I ML L
Sbjct: 589 NHFFTVADKVHPSSSSIYEMLDDL 612
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 192/383 (50%), Gaps = 20/383 (5%)
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
+ SL QQ H+ L ++ +F+ LIS Y G S + LV+ N+ +N+L
Sbjct: 39 LHSLKLTQQCHSQILTNCFSQNAFLTTRLISAYATFGDSIMSKLVFDSVHTKNVYLWNSL 98
Query: 173 IAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
I G+V+N Q + +F+ M R LLPD ++ A ++ DL G ++H +++
Sbjct: 99 INGYVKNHQFDNAIVLFRQMGR-CLLPDDYTLATISKVSGEIQDLVLGKLIHGKSLRIGF 157
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGL----- 287
S+ VGN++M++Y + G+A K F + ++++ S+N I+ C+ + + L
Sbjct: 158 VSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGSFNVIISGCAALGNLDYSLYADLW 217
Query: 288 SVFKEMSNDHGVRPDDFTFASILAACAGL-ASVQHGKQIHAHLIR----MRLNQDVGVGN 342
+ F+ M G D FT AS+L C HG+++H +L++ +++ DV +G+
Sbjct: 218 NFFRRMQC-QGYNADAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGS 276
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-KATGIK 401
+L++MY++ + S ++F++M RN+ W +I + + AL LF +M + I+
Sbjct: 277 SLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALILFREMQRKDRIR 336
Query: 402 PDSVTFIGLLTACN-HAGLV--KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLE 458
P+ V+ + +L AC GL+ K+ A+ ME + I LID+ + G L
Sbjct: 337 PNRVSLVSVLPACGLLVGLMGGKQVHAFSIKME----FNDYISLRNALIDMYAKCGSLDY 392
Query: 459 AEEYTKKFPLGQDPIVLGTLLSA 481
A +D I +++SA
Sbjct: 393 ARRVFDNGSYSKDAITWSSIISA 415
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 175/379 (46%), Gaps = 24/379 (6%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+H L++G D++V N V+++Y +C + A KVFDEM +RN+ S++ +ISG G
Sbjct: 148 IHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGSFNVIISGCAALGN 207
Query: 84 HLLAL-----EFFSQMHLL---PNEYIFASAISACAGIQ-SLVKGQQIHAYSLKFG---- 130
+L FF +M + + AS + C G+++H Y +K G
Sbjct: 208 LDYSLYADLWNFFRRMQCQGYNADAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLK 267
Query: 131 YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFK 190
S +G+SLI MY + + V+ + N+ + A+I G+V+N PE +F+
Sbjct: 268 MCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALILFR 327
Query: 191 LMLRQG-LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF 249
M R+ + P+R S L C + L G +H ++K + + N ++ +Y+K
Sbjct: 328 EMQRKDRIRPNRVSLVSVLPACGLLVGLMGGKQVHAFSIKMEFNDYISLRNALIDMYAK- 386
Query: 250 NLIGEAEKAFRLIEE----KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFT 305
G + A R+ + KD I+W++ I+A ++ L+ + EM G++PD T
Sbjct: 387 --CGSLDYARRVFDNGSYSKDAITWSSIISAYGLHGKGQEALTTYYEMLQ-QGIKPDMIT 443
Query: 306 FASILAACAGLASVQHGKQIHAHL-IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
+L+AC V G I+ L + V + +V++ + G + + EM
Sbjct: 444 VVGVLSACCRSGLVDEGISIYNSLTTEYEMKPSVEICGCVVDLLGRSGQLDQALDFIREM 503
Query: 365 -LHRNVVSWNTIIAAHANH 382
+ W +++ A H
Sbjct: 504 PIIPGPSVWGSLLTASVIH 522
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+ S+L C L G +HA +KM + + N ++++YAKCG + AR+VFD
Sbjct: 341 SLVSVLPACGLLVGLMGGKQVHAFSIKMEFNDYISLRNALIDMYAKCGSLDYARRVFDNG 400
Query: 64 S-ERNLVSWSAMIS--GHHQAGEHLLALEF-FSQMHLLPNEYIFASAISAC 110
S ++ ++WS++IS G H G+ L + Q + P+ +SAC
Sbjct: 401 SYSKDAITWSSIISAYGLHGKGQEALTTYYEMLQQGIKPDMITVVGVLSAC 451
>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
Length = 706
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 179/578 (30%), Positives = 313/578 (54%), Gaps = 9/578 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
K ++ C++ AL +G +H + ++G+ DV VSNH++ +Y KCG + AR VF+
Sbjct: 35 KECVRVIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEA 94
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISAC-AGIQSLVK 118
+N+ SW+ +I+ Q G AL F +M + P+ F +AI+AC AG + L
Sbjct: 95 TPAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPA 154
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ +HA ++G+ SL+SMY K G +++ + E N VS+NA+IA F E
Sbjct: 155 GRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAE 214
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+++ + + M +G+ ++ + + L+ +H ++ + + V
Sbjct: 215 HRRGLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFDQD--V 272
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N I+ +Y K + +AE F+ + + D+I+WNT IAA S + L F E+ + G
Sbjct: 273 VNVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALR-FYELMQEEG 331
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
V PDD+T+ S++ ACA L ++ GKQ+H L R Q + N+LVNMY KCG++ +
Sbjct: 332 VVPDDYTYVSVIDACATLGDMEVGKQVHRRLGD-RAFQVTELANSLVNMYGKCGILDVAR 390
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+F++ + V+WN +I A+A H A +LF M+ G +P +TF+ +L+AC +AG
Sbjct: 391 SIFDKTA-KGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACANAG 449
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
L +E +YF M++ +G+ P H+ C+++ LG+AG+L +AE + P D + +
Sbjct: 450 LPEEAHSYFVCMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSF 509
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L+ CR D+ G+ AK + P ++ YV L+ ++A G + + + RK++ D G++
Sbjct: 510 LANCRSHGDMKRGKFAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLDRGIR 569
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
K S+I++ + +FT + S+ + EI LK L
Sbjct: 570 KNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLD 607
>gi|356532922|ref|XP_003535018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Glycine max]
Length = 611
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 188/549 (34%), Positives = 300/549 (54%), Gaps = 11/549 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMI-LARKVFDEMS 64
+SLL C K + G LHA VLK G D V+N +L+LY+K AR +FD +
Sbjct: 57 ASLLQACRKAHSFPLGTHLHAHVLKSGFLADRFVANSLLSLYSKLSPHFSQARALFDALP 116
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
+++++W+++ISGH Q + A+ F QM + PN + +S + AC+ +++L G+
Sbjct: 117 FKDVIAWTSIISGHVQKAQPKTAVHLFLQMLGQAIEPNAFTLSSILKACSQLENLHLGKT 176
Query: 122 IHAYSLKFGYASIS-FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+HA G+ S + V +LI MY + DA V+ E EP+ V + A+I+ N
Sbjct: 177 LHAVVFIRGFHSNNNVVACALIDMYGRSRVVDDARKVFDELPEPDYVCWTAVISTLARND 236
Query: 181 QPEKGFEVFKLMLRQGL--LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ + VF M GL D F+F L C LR G +H V ++ N FV
Sbjct: 237 RFREAVRVFFAMHDGGLGLEVDGFTFGTLLNACGNLGWLRMGREVHGKVVTLGMKGNVFV 296
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++++ +Y K +G A F +EEK+ ++ + H + L + +E +
Sbjct: 297 ESSLLDMYGKCGEVGCARVVFDGLEEKNEVALTAMLGVYCHNGECGSVLGLVREWRS--- 353
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
D ++F +I+ AC+GLA+V+ G ++H +R +DV V +ALV++YAKCG + +Y
Sbjct: 354 -MVDVYSFGTIIRACSGLAAVRQGNEVHCQYVRRGGWRDVVVESALVDLYAKCGSVDFAY 412
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
+LF+ M RN+++WN +I A + G ++LFE+M G++PD ++F+ +L AC+H G
Sbjct: 413 RLFSRMEARNLITWNAMIGGFAQNGRGQEGVELFEEMVKEGVRPDWISFVNVLFACSHNG 472
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV +G YF+ M + YGI P + H+TC+ID+LGRA + EAE + D L
Sbjct: 473 LVDQGRRYFDLMRREYGIRPGVVHYTCMIDILGRAELIEEAESLLESADCRYDHSRWAVL 532
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L AC D V ER+AK++ L+P YVLL N+Y + G W + RK++++ G+K
Sbjct: 533 LGACTKCSDYVTAERIAKKMIQLEPDFHLSYVLLGNIYRAVGKWNEALEIRKLMEERGVK 592
Query: 539 KEPSYSMIE 547
K P S IE
Sbjct: 593 KVPGKSWIE 601
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 184/358 (51%), Gaps = 7/358 (1%)
Query: 102 IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG-YSSDALLVYGE 160
++AS + AC S G +HA+ LK G+ + FV NSL+S+Y K+ + S A ++
Sbjct: 55 VYASLLQACRKAHSFPLGTHLHAHVLKSGFLADRFVANSLLSLYSKLSPHFSQARALFDA 114
Query: 161 AFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKG 220
+++++ ++I+G V+ QP+ +F ML Q + P+ F+ + L+ CS +L G
Sbjct: 115 LPFKDVIAWTSIISGHVQKAQPKTAVHLFLQMLGQAIEPNAFTLSSILKACSQLENLHLG 174
Query: 221 MILHCLT-VKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSH 279
LH + ++ +N V ++ +Y + ++ +A K F + E D + W I+ +
Sbjct: 175 KTLHAVVFIRGFHSNNNVVACALIDMYGRSRVVDDARKVFDELPEPDYVCWTAVISTLAR 234
Query: 280 CADYEKGLSVFKEMSNDH-GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
+ + + VF M + G+ D FTF ++L AC L ++ G+++H ++ + + +V
Sbjct: 235 NDRFREAVRVFFAMHDGGLGLEVDGFTFGTLLNACGNLGWLRMGREVHGKVVTLGMKGNV 294
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
V ++L++MY KCG + C+ +F+ + +N V+ ++ + ++ GS L L + ++
Sbjct: 295 FVESSLLDMYGKCGEVGCARVVFDGLEEKNEVALTAMLGVYCHNGECGSVLGLVREWRSM 354
Query: 399 GIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
D +F ++ AC+ V++G + G D+ + L+DL + G +
Sbjct: 355 ---VDVYSFGTIIRACSGLAAVRQGNEVHCQYVRRGGWR-DVVVESALVDLYAKCGSV 408
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 166/329 (50%), Gaps = 10/329 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQP-DVIVSNHVLNLYAKCGKMILARKVF 60
A ++SS+L CS+ + L G +LHA V G + +V+ ++++Y + + ARKVF
Sbjct: 155 AFTLSSILKACSQLENLHLGKTLHAVVFIRGFHSNNNVVACALIDMYGRSRVVDDARKVF 214
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH-----LLPNEYIFASAISACAGIQS 115
DE+ E + V W+A+IS + A+ F MH L + + F + ++AC +
Sbjct: 215 DELPEPDYVCWTAVISTLARNDRFREAVRVFFAMHDGGLGLEVDGFTFGTLLNACGNLGW 274
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
L G+++H + G FV +SL+ MY K G A +V+ E N V+ A++
Sbjct: 275 LRMGREVHGKVVTLGMKGNVFVESSLLDMYGKCGEVGCARVVFDGLEEKNEVALTAMLGV 334
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+ N + V L+ + D +SF + CS +R+G +HC V+ +
Sbjct: 335 YCHNGECG---SVLGLVREWRSMVDVYSFGTIIRACSGLAAVRQGNEVHCQYVRRGGWRD 391
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
V + ++ LY+K + A + F +E ++LI+WN I + ++G+ +F+EM
Sbjct: 392 VVVESALVDLYAKCGSVDFAYRLFSRMEARNLITWNAMIGGFAQNGRGQEGVELFEEMVK 451
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQ 324
+ GVRPD +F ++L AC+ V G++
Sbjct: 452 E-GVRPDWISFVNVLFACSHNGLVDQGRR 479
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 150/292 (51%), Gaps = 2/292 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +LL+ C L+ G +H V+ +G++ +V V + +L++Y KCG++ AR VFD +
Sbjct: 261 TFGTLLNACGNLGWLRMGREVHGKVVTLGMKGNVFVESSLLDMYGKCGEVGCARVVFDGL 320
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
E+N V+ +AM+ + GE L + + + Y F + I AC+G+ ++ +G ++H
Sbjct: 321 EEKNEVALTAMLGVYCHNGECGSVLGLVREWRSMVDVYSFGTIIRACSGLAAVRQGNEVH 380
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
++ G V ++L+ +Y K G A ++ NL+++NA+I GF +N + +
Sbjct: 381 CQYVRRGGWRDVVVESALVDLYAKCGSVDFAYRLFSRMEARNLITWNAMIGGFAQNGRGQ 440
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+G E+F+ M+++G+ PD SF L CS + + +G L + V T M
Sbjct: 441 EGVELFEEMVKEGVRPDWISFVNVLFACSHNGLVDQGRRYFDLMRREYGIRPGVVHYTCM 500
Query: 244 A-LYSKFNLIGEAEKAFRLIEEK-DLISWNTFIAACSHCADYEKGLSVFKEM 293
+ + LI EAE + + D W + AC+ C+DY + K+M
Sbjct: 501 IDILGRAELIEEAESLLESADCRYDHSRWAVLLGACTKCSDYVTAERIAKKM 552
>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 780
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 178/549 (32%), Positives = 301/549 (54%), Gaps = 6/549 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+ S++ C + + G+S+HA +K+G+ V ++N ++++Y K G + + +VFD M
Sbjct: 222 SLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGM 281
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
E+N VSW++ I AG + L F +M +++P +S + A + S G+
Sbjct: 282 LEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGR 341
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H YS+K FV NSL+ MY K G A ++ + + N+VS+NA+IA V+N
Sbjct: 342 EVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNG 401
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ F + M + G P+ + L C+ L+ G +H +++ L + F+ N
Sbjct: 402 AETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISN 461
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +YSK + A F EKD +S+NT I S + L +FK+M + G+
Sbjct: 462 ALIDMYSKCGQLSLARNIFER-SEKDDVSYNTLILGYSQSPWCFESLLLFKQMRS-VGID 519
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D +F L+AC L+ +HGK+IH L+R L+ + N+L+++Y K G++ + K+
Sbjct: 520 YDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKI 579
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN++ ++V SWNT+I + H A +LFE MK G+ D V++I +L AC+H GLV
Sbjct: 580 FNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLV 639
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+G+ YF+ M I P H+ C++DLLGRAG+L + E + P + V G LL
Sbjct: 640 DKGKKYFSQM-VAQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLG 698
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ ++ + + A+ LF L+P + Y L+ N+YA G W + RK++K ++K
Sbjct: 699 ACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKSRKVQKN 758
Query: 541 PSYSMIEVQ 549
P+YS ++ Q
Sbjct: 759 PAYSWVQDQ 767
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 142/469 (30%), Positives = 243/469 (51%), Gaps = 18/469 (3%)
Query: 19 QQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG- 77
+G+ LHA+ L+ G DV N ++ YA CGK AR+VFDEM ER++VSW++++S
Sbjct: 136 DKGLELHASALRRGHLADVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAF 195
Query: 78 -----HHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYA 132
H A L+++ S L N S + AC Q G IHA ++K G
Sbjct: 196 LVNGMFHDARRALVSM-MRSGFPL--NVASLVSVVPACGTEQEEKFGLSIHALAVKVGLN 252
Query: 133 SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM 192
++ + N+L+ MY K G ++ V+ E N VS+N+ I F+ +F+ M
Sbjct: 253 TMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKM 312
Query: 193 LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI 252
++P + + L G +H ++K ++ + FV N+++ +Y+KF +
Sbjct: 313 SEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSL 372
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
+A F +++++++SWN IA + + +M G P+ T ++L A
Sbjct: 373 EKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKS-GECPNSITLVNVLPA 431
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
CA +AS++ GKQIHA IR L D+ + NAL++MY+KCG +S + +F E ++ VS+
Sbjct: 432 CARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIF-ERSEKDDVSY 490
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG-EAYFNSME 431
NT+I ++ +L LF+QM++ GI D+V+F+G L+AC + + K G E + +
Sbjct: 491 NTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVR 550
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEA----EEYTKKFPLGQDPIVLG 476
+ P + + L+DL + G L+ A + TKK + ++LG
Sbjct: 551 RLLSGHPFLSN--SLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILG 597
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 51/93 (54%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A S L C+ + G +H +++ + +SN +L+LY K G ++ A K+F+
Sbjct: 522 AVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFN 581
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM 94
+++++++ SW+ MI G+ G+ +A E F M
Sbjct: 582 KITKKDVASWNTMILGYGMHGQIDIAFELFELM 614
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 186/556 (33%), Positives = 296/556 (53%), Gaps = 37/556 (6%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
++H+ ++ ++ + + ++ YA + ARKVFDE+ ERN++ + MI + G
Sbjct: 60 TVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNG 119
Query: 83 EHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
+ ++ F M ++ P+ Y F + AC+ ++V G++IH + K G +S FVGN
Sbjct: 120 FYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGN 179
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
L+SMY K G+ S+A LV E ++VS+N+L+ G+ +NQ+ + EV + M
Sbjct: 180 GLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM------- 232
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
E +S+D G + L P V NT N++ + F
Sbjct: 233 ---------ESVKISHD--AGTMASLL---------PAVSNTTTE-----NVMYVKDMFF 267
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
++ +K L+SWN I A + + ++ M D G PD + S+L AC +++
Sbjct: 268 KM-GKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEAD-GFEPDAVSITSVLPACGDTSAL 325
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
GK+IH ++ R +L ++ + NAL++MYAKCG + + +F M R+VVSW +I+A+
Sbjct: 326 SLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAY 385
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
G A+ LF +++ +G+ PDS+ F+ L AC+HAGL++EG + F M Y I+P
Sbjct: 386 GFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPR 445
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLF 499
+EH C++DLLGRAGK+ EA + + + + V G LL ACR+ D IG A +LF
Sbjct: 446 LEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLF 505
Query: 500 HLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAE 559
L P + YVLLSN+YA G W +V R ++K GLKK P S +EV F V +
Sbjct: 506 QLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGD 565
Query: 560 FSHSKIGEINYMLKTL 575
SH + EI L L
Sbjct: 566 RSHPQSDEIYRELDVL 581
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 184/450 (40%), Gaps = 56/450 (12%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L CS + + G +H + K+G+ + V N ++++Y KCG + AR V DEMS R+
Sbjct: 146 VLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRD 205
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSL 127
+VSW++++ G+ Q ALE +M + + + S + + ++ +
Sbjct: 206 VVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDM 265
Query: 128 KFGYASISFVG-NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
F S V N +I +YMK +A+ +Y ++ GF
Sbjct: 266 FFKMGKKSLVSWNVMIGVYMKNAMPVEAVELY--------------------SRMEADGF 305
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
E PD S L C ++ L G +H + KL N + N ++ +Y
Sbjct: 306 E-----------PDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMY 354
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
+K + +A F ++ +D++SW I+A +++F ++ D G+ PD F
Sbjct: 355 AKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKL-QDSGLVPDSIAF 413
Query: 307 ASILAACAGLASVQHGKQIHAHLI-RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM- 364
+ LAAC+ ++ G+ + ++ + +V++ + G + +Y+ +M
Sbjct: 414 VTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMS 473
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+ N W ++ A H S T IGLL A L E
Sbjct: 474 MEPNERVWGALLGACRVH---------------------SDTDIGLLAADKLFQLAPEQS 512
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
Y+ + Y + E T + +++ G
Sbjct: 513 GYYVLLSNIYAKAGRWEEVTNIRNIMKSKG 542
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A SI+S+L C T AL G +H + + + P++++ N ++++YAKCG + AR VF+
Sbjct: 309 AVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFE 368
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
M R++VSW+AMIS + +G A+ FS++ L+P+ F + ++AC+ L +
Sbjct: 369 NMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEE 428
Query: 119 GQ 120
G+
Sbjct: 429 GR 430
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 16/209 (7%)
Query: 323 KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH 382
+ +H+ +I L + +G L+ YA ++ + K+F+E+ RNV+ N +I ++ N+
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 383 RLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEH 442
G +K+F M ++PD TF +L AC+ +G + G S K G+S +
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKV-GLSSTLFV 177
Query: 443 FTCLIDLLGRAGKLLEA----EEYTKKFPLGQDPIVLG--------TLLSACRLRRDVVI 490
L+ + G+ G L EA +E +++ + + +V+G L CR V I
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKI 237
Query: 491 GE---RLAKQLFHLQPTTTSPYVLLSNLY 516
+A L + TTT + + +++
Sbjct: 238 SHDAGTMASLLPAVSNTTTENVMYVKDMF 266
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 159/473 (33%), Positives = 272/473 (57%), Gaps = 1/473 (0%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
F + CA ++++ + H +++ + N LI+ Y K G+ A V+
Sbjct: 66 FIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGML 125
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
E +LVS+N +I + N+ + ++F M +G F+ + L C + D +
Sbjct: 126 ERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKK 185
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
LHCL++K L+ N +VG ++ LY+K +I +A + F +++K ++W++ +A +
Sbjct: 186 LHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKN 245
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
YE+ L +++ + + + FT +S++ AC+ LA++ GKQ+HA + + +V V +
Sbjct: 246 YEEALLLYRR-AQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVAS 304
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
+ V+MYAKCG + SY +F+E+ +N+ WNTII+ A H + LFE+M+ G+ P
Sbjct: 305 SAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHP 364
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
+ VTF LL+ C H GLV+EG +F M TYG+SP++ H++C++D+LGRAG L EA E
Sbjct: 365 NEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYEL 424
Query: 463 TKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMW 522
K P + G+LL++CR+ +++ + E AK+LF L+P +VLLSN+YA++ W
Sbjct: 425 IKSIPFEPTASIWGSLLASCRVCKNLELAEVAAKKLFELEPENAGNHVLLSNIYAANKQW 484
Query: 523 GDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
++A +RK+L+D +KK S I+++ F V E SH +I EI ML L
Sbjct: 485 EEIAKSRKLLRDCDVKKVRGQSWIDIKDKVHIFRVGESSHPRIREICTMLDNL 537
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 212/383 (55%), Gaps = 8/383 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A +L C++ A+ + + H ++M +Q DV +SN ++N Y+KCG + LAR+VFD
Sbjct: 63 ASDFIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFD 122
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
M ER+LVSW+ MI + + AL+ F +M +E+ +S +SAC ++
Sbjct: 123 GMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALE 182
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+++H S+K +VG +L+ +Y K G +DA+ V+ + + V++++++AG+V+
Sbjct: 183 CKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQ 242
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
++ E+ +++ R L ++F+ + + CS L +G +H + K SN FV
Sbjct: 243 SKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFV 302
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++ + +Y+K + E+ F ++EK++ WNT I+ + A ++ + +F++M D G
Sbjct: 303 ASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQD-G 361
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR--LNQDVGVGNALVNMYAKCGLISC 356
+ P++ TF+S+L+ C V+ G++ L+R L+ +V + +V++ + GL+S
Sbjct: 362 MHPNEVTFSSLLSVCGHTGLVEEGRRFF-KLMRTTYGLSPNVVHYSCMVDILGRAGLLSE 420
Query: 357 SYKLFNEMLHRNVVS-WNTIIAA 378
+Y+L + S W +++A+
Sbjct: 421 AYELIKSIPFEPTASIWGSLLAS 443
>gi|125579001|gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
Length = 601
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 178/549 (32%), Positives = 301/549 (54%), Gaps = 6/549 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+ S++ C + + G+S+HA +K+G+ V ++N ++++Y K G + + +VFD M
Sbjct: 43 SLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGM 102
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
E+N VSW++ I AG + L F +M +++P +S + A + S G+
Sbjct: 103 LEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGR 162
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++H YS+K FV NSL+ MY K G A ++ + + N+VS+NA+IA V+N
Sbjct: 163 EVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNG 222
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ F + M + G P+ + L C+ L+ G +H +++ L + F+ N
Sbjct: 223 AETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISN 282
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +YSK + A F EKD +S+NT I S + L +FK+M + G+
Sbjct: 283 ALIDMYSKCGQLSLARNIFER-SEKDDVSYNTLILGYSQSPWCFESLLLFKQMRS-VGID 340
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D +F L+AC L+ +HGK+IH L+R L+ + N+L+++Y K G++ + K+
Sbjct: 341 YDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKI 400
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN++ ++V SWNT+I + H A +LFE MK G+ D V++I +L AC+H GLV
Sbjct: 401 FNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLV 460
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+G+ YF+ M I P H+ C++DLLGRAG+L + E + P + V G LL
Sbjct: 461 DKGKKYFSQM-VAQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLG 519
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ ++ + + A+ LF L+P + Y L+ N+YA G W + RK++K ++K
Sbjct: 520 ACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKSRKVQKN 579
Query: 541 PSYSMIEVQ 549
P+YS ++ Q
Sbjct: 580 PAYSWVQDQ 588
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 215/425 (50%), Gaps = 18/425 (4%)
Query: 63 MSERNLVSWSAMISG------HHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSL 116
M ER++VSW++++S H A L+++ + N S + AC Q
Sbjct: 1 MPERDVVSWNSLVSAFLVNGMFHDARRALVSM---MRSGFPLNVASLVSVVPACGTEQEE 57
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G IHA ++K G ++ + N+L+ MY K G ++ V+ E N VS+N+ I F
Sbjct: 58 KFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCF 117
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
+ +F+ M ++P + + L G +H ++K ++ +
Sbjct: 118 LNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDI 177
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
FV N+++ +Y+KF + +A F +++++++SWN IA + + +M
Sbjct: 178 FVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKS 237
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
G P+ T ++L ACA +AS++ GKQIHA IR L D+ + NAL++MY+KCG +S
Sbjct: 238 -GECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSL 296
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ +F E ++ VS+NT+I ++ +L LF+QM++ GI D+V+F+G L+AC +
Sbjct: 297 ARNIF-ERSEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTN 355
Query: 417 AGLVKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA----EEYTKKFPLGQD 471
+ K G E + + + P + + L+DL + G L+ A + TKK +
Sbjct: 356 LSVFKHGKEIHCVLVRRLLSGHPFLSN--SLLDLYTKGGMLVTASKIFNKITKKDVASWN 413
Query: 472 PIVLG 476
++LG
Sbjct: 414 TMILG 418
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 57/110 (51%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A S L C+ + G +H +++ + +SN +L+LY K G ++ A K+F+
Sbjct: 343 AVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFN 402
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACA 111
+++++++ SW+ MI G+ G+ +A E F M +Y S I+ A
Sbjct: 403 KITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLA 452
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 192/601 (31%), Positives = 312/601 (51%), Gaps = 48/601 (7%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL +L Q +HA L G+ + H++ + AR V D+
Sbjct: 2 LLSLLRTATSLTQIHQIHAQTLIHGLP----LQTHLIPKLIDLHSIDYARFVLDQTPSPT 57
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
SW+++I + G +L + +M P+ + F + AC+ + S+++G+QIH
Sbjct: 58 DFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHT 117
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ L+ G+ S FV NSLI MY K A + + + VS+N++I+G+V+ Q EK
Sbjct: 118 HVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEK 177
Query: 185 GFEVFKLM----------------------------LRQGLL------PDRFSFAGGLEI 210
++F+ M RQ L+ P+ + L
Sbjct: 178 ARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSA 237
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE---KDL 267
CS + G L K+ N + ++ +YSK G+ EKA+R+ + K+L
Sbjct: 238 CSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSK---CGDVEKAWRIFDGVSCKNL 294
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHA 327
SWN I C E+ + +++ M V+P++ T ++L+ACAGL +++ G+++H
Sbjct: 295 PSWNAIITGCVQGGLLEEAIDLYRHMKA-QSVKPNEITLVNVLSACAGLGALELGREVHL 353
Query: 328 HLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGS 387
+L R L+ +V + ALV+MYAKCG I + +F + ++V WN +I A H G
Sbjct: 354 YLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRD 413
Query: 388 ALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLI 447
+L +F QM G++P+ VTFIG+L+ACNH+GLV+EG F+SM +G+SP +EH+ C++
Sbjct: 414 SLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMV 473
Query: 448 DLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTS 507
DLLGRAG L EA E + + D I+ G LLSACR+ R++ + +++++ + Q
Sbjct: 474 DLLGRAGHLKEAYELVQNMLIPPDSIIWGALLSACRIHRNLELADKISETIMASQDPNIG 533
Query: 508 PYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGE 567
+LLSN+YAS G W DVA R+ +K+ +KK S +EV G +F V + +H K GE
Sbjct: 534 FCILLSNIYASSGRWKDVARVRRQVKEKRIKKPSGCSWVEVDGVVHRFVVEDTTHLKSGE 593
Query: 568 I 568
I
Sbjct: 594 I 594
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 116/224 (51%), Gaps = 3/224 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++ LL CS + G L + I + I+ ++++Y+KCG + A ++FD
Sbjct: 228 AATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFD 287
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
+S +NL SW+A+I+G Q G A++ + M + PNE + +SACAG+ +L
Sbjct: 288 GVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALEL 347
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+++H Y + G + +L+ MY K G DA L++ + E ++ +NA+I G
Sbjct: 348 GREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAY 407
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
+ VF M+R G+ P+ +F G L C+ S + +G +
Sbjct: 408 HGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRV 451
>gi|115458828|ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group]
gi|38347057|emb|CAE04357.2| OSJNBa0060P14.4 [Oryza sativa Japonica Group]
gi|113564585|dbj|BAF14928.1| Os04g0463800 [Oryza sativa Japonica Group]
Length = 767
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 175/557 (31%), Positives = 306/557 (54%), Gaps = 12/557 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
++++ S L C L G LH +K G+ V + + ++Y KC AR +F
Sbjct: 215 SRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFP 274
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
E+ E++LVSW+++I + +AG A+E F M L P+E + + ++ +
Sbjct: 275 ELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRG 334
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ HA ++ + +GN+LISMY K A V+ + + S+++++ + +
Sbjct: 335 GKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCK 394
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVS-----NDLRKGMILHCLTVKCKLE 233
K E+++ M Q D F + I +S LR G HC ++K
Sbjct: 395 AGLDLKCLELYREM--QFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAG 452
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
N V N ++++Y + A K F +++ KD+++W+ I++ SH + L ++ +M
Sbjct: 453 ENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQM 512
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGL 353
+ GV+P+ T S++++CA LA+++HG+ IH+H+ + L D+ + ALV+MY KCG
Sbjct: 513 LTE-GVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQ 571
Query: 354 ISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+ + K+F+ ML R+VV+WN +I+ + H ALKLF M+ +KP+S+TF+ +L+A
Sbjct: 572 LGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSA 631
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
C HAGLV +G F ME+ Y + P+++H+ C++DLLG++G L EAE+ P+ D
Sbjct: 632 CCHAGLVDKGRELFTRMEE-YSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGG 690
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
+ GTLL AC++ + +G R+AK+ F P Y+L+SN Y S W ++ R M+K
Sbjct: 691 IWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEKWNEIEKLRDMMK 750
Query: 534 DSGLKKEPSYSMIEVQG 550
+ G++K +S I++ G
Sbjct: 751 NHGVEKSIGWSTIDICG 767
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 234/455 (51%), Gaps = 19/455 (4%)
Query: 17 ALQQGISLHAAVLKMGI---QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSA 73
AL G ++HA ++ G+ V V++ ++ +YA+CG + A ++FDEM ER++V+W+A
Sbjct: 122 ALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTA 181
Query: 74 MISGHHQAGEHLLALEFFSQM-------HLLPNEYIFASAISACAGIQSLVKGQQIHAYS 126
+ISG G+ L + +M PN S + AC + L G +H +
Sbjct: 182 VISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFG 241
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
+K G V +SL SMY K + DA +++ E E +LVS+ +LI + EK
Sbjct: 242 VKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAV 301
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
E+F M GL PD + L +R G H V+ + +GN ++++Y
Sbjct: 302 ELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMY 361
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
+K + A FR++ ++D SW++ + A K L +++EM D+F +
Sbjct: 362 AKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRD---KDEFEY 418
Query: 307 AS-----ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
+ I+++C+ L ++ G+ H + I+ ++ V NAL++MY +CG + K+F
Sbjct: 419 DTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIF 478
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ ++VV+W+ +I+++++ AL L++QM G+KP+S T + ++++C + ++
Sbjct: 479 GMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALE 538
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
GE +S K G+ D+ T L+D+ + G+L
Sbjct: 539 HGE-LIHSHVKDVGLECDLSICTALVDMYMKCGQL 572
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 192/385 (49%), Gaps = 13/385 (3%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
+LHA + G+ P + +++ Y+ G LA F + W++++ H+A
Sbjct: 27 TLHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRAS 86
Query: 83 EHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGY----ASIS 135
+ L +M P+ + SA A + +L G +HAYS++FG S++
Sbjct: 87 DFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVA 146
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
V +SL+ MY + G DA+ ++ E E ++V++ A+I+G V N Q +G M+R
Sbjct: 147 -VASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRS 205
Query: 196 ----GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
G P+ + GLE C V +L G LH VK + P V +++ ++Y+K +
Sbjct: 206 AGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDS 265
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+A F + EKDL+SW + I A EK + +F M + G++PD+ + +LA
Sbjct: 266 TEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGM-EESGLQPDEVVISCLLA 324
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
A V+ GK HA ++R V +GNAL++MYAKC + + +F + R+ S
Sbjct: 325 GLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDS 384
Query: 372 WNTIIAAHANHRLGGSALKLFEQMK 396
W++++ A+ L L+L+ +M+
Sbjct: 385 WSSMVVAYCKAGLDLKCLELYREMQ 409
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 144/323 (44%), Gaps = 7/323 (2%)
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+HA ++ G + L+S Y G + A L + + P+ +N+L+
Sbjct: 28 LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL---ESNPFV 238
+ M G P RF+ + L G +H +V+ L + + V
Sbjct: 88 FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM---SN 295
++++ +Y++ + +A + F + E+D+++W I+ C +GLS M +
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
D G RP+ T S L AC L + G +H ++ + V ++L +MY KC
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTE 267
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ LF E+ +++VSW ++I A+ A++LF M+ +G++PD V LL
Sbjct: 268 DARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLG 327
Query: 416 HAGLVKEGEAYFNSM-EKTYGIS 437
+ V+ G+ + ++ + +G S
Sbjct: 328 NDAKVRGGKTFHAAIVRRNFGDS 350
>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03380, mitochondrial; Flags: Precursor
gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 178/548 (32%), Positives = 304/548 (55%), Gaps = 10/548 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S L C++ + L G +H ++K+ +V+++ +L++YAKCG++ A KVF++++
Sbjct: 146 SKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG-LLDMYAKCGEIKSAHKVFNDITL 204
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQI 122
RN+V W++MI+G+ + L F++M ++L NEY + + I AC + +L +G+
Sbjct: 205 RNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWF 264
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H +K G S + SL+ MY+K G S+A V+ E +LV + A+I G+ N
Sbjct: 265 HGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSV 324
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL-ESNPFVGNT 241
+ +F+ M + P+ + A L C + +L G +H L++K + ++N V N
Sbjct: 325 NEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN--VANA 382
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y+K +A+ F + EKD+++WN+ I+ S + L +F M N V P
Sbjct: 383 LVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM-NSESVTP 441
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRL--NQDVGVGNALVNMYAKCGLISCSYK 359
+ T AS+ +ACA L S+ G +HA+ +++ + V VG AL++ YAKCG +
Sbjct: 442 NGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARL 501
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F+ + +N ++W+ +I + +L+LFE+M KP+ TF +L+AC H G+
Sbjct: 502 IFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGM 561
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V EG+ YF+SM K Y +P +H+TC++D+L RAG+L +A + +K P+ D G L
Sbjct: 562 VNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFL 621
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
C + +GE + K++ L P S YVL+SNLYASDG W R ++K GL K
Sbjct: 622 HGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSK 681
Query: 540 EPSYSMIE 547
+S +E
Sbjct: 682 IAGHSTME 689
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 222/452 (49%), Gaps = 12/452 (2%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C+ +L+Q H + G+ D+ ++ +++LY G AR VFD++ E +
Sbjct: 50 LLSKCTNIDSLRQS---HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
W M+ + E + ++ + + ++ +F+ A+ AC +Q L G++IH
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 125 YSLKF-GYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+K + ++ G L+ MY K G A V+ + N+V + ++IAG+V+N E
Sbjct: 167 QLVKVPSFDNVVLTG--LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCE 224
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+G +F M +L + +++ + C+ + L +G H VK +E + + +++
Sbjct: 225 EGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLL 284
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y K I A + F DL+ W I +H + LS+F++M ++P+
Sbjct: 285 DMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE-IKPNC 343
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T AS+L+ C + +++ G+ +H I++ + D V NALV+MYAKC + +F
Sbjct: 344 VTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEM 402
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
+++V+WN+II+ + + AL LF +M + + P+ VT L +AC G + G
Sbjct: 403 ESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVG 462
Query: 424 EA-YFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
+ + S++ + S + T L+D + G
Sbjct: 463 SSLHAYSVKLGFLASSSVHVGTALLDFYAKCG 494
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 160/314 (50%), Gaps = 19/314 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I+S+L C + L+ G S+H +K+GI D V+N ++++YAKC + A+ VF+
Sbjct: 345 TIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEME 403
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
SE+++V+W+++ISG Q G AL F +M+ + PN AS SACA + SL G
Sbjct: 404 SEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGS 463
Query: 121 QIHAYSLKFGY--ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+HAYS+K G+ +S VG +L+ Y K G A L++ E N ++++A+I G+ +
Sbjct: 464 SLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGK 523
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
E+F+ ML++ P+ +F L C + + +G K F
Sbjct: 524 QGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYK----DYNFT 579
Query: 239 GNT--IMALYSKFNLIGEAEKAFRLIE----EKDLISWNTFIAACSHCADYEKGLSVFKE 292
+T + GE E+A +IE + D+ + F+ C + ++ G V K+
Sbjct: 580 PSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKK 639
Query: 293 MSNDHGVRPDDFTF 306
M + H PDD ++
Sbjct: 640 MLDLH---PDDASY 650
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 169/510 (33%), Positives = 279/510 (54%), Gaps = 8/510 (1%)
Query: 71 WSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSL 127
++A++SG+ A + ++ LP+ + F + + +CA + +G+Q+H +
Sbjct: 2 FNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVII 61
Query: 128 KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE 187
K G+ +V NSL+ Y DA V+ E ++VS+ +I+G+V + E
Sbjct: 62 KMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFD---E 118
Query: 188 VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYS 247
L LR + P+ +F L C L G +H L+ K V N +M +Y
Sbjct: 119 AVGLFLRMDVEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYV 178
Query: 248 KFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFA 307
K + A++ F + EKD++SW + I+ C ++ L +F++M + G+ PD
Sbjct: 179 KCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSS-GIEPDGIILT 237
Query: 308 SILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR 367
S+L+ACA L ++ +G+ +H H+ R + D+ +G A+V+MYAKCG I S ++FN M H+
Sbjct: 238 SVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHK 297
Query: 368 NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYF 427
NV++WN ++ A H L+LFE+M G++P+ VTF+ +LTAC H GLV EG YF
Sbjct: 298 NVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQYF 357
Query: 428 NSME-KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRR 486
N M+ + Y + P +EH+ C++DLL RA L EA E TK P+ D ++G LLSAC+
Sbjct: 358 NWMKGQQYNLPPRLEHYGCMVDLLCRARLLDEALELTKAMPMSPDVRIMGALLSACKENG 417
Query: 487 DVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMI 546
+ + + + + L + YVLLSN++A + W DV R+++K+ G+KK P ++I
Sbjct: 418 NTELPQEILDRFVELDSHDSGVYVLLSNIHAINQRWDDVTRIRRLMKEKGIKKPPGSTVI 477
Query: 547 EVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
E+ G +F V + H + I +LK LS
Sbjct: 478 ELDGKAHEFIVGDTRHPQDKRIRLLLKILS 507
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 167/321 (52%), Gaps = 1/321 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++L C+K + +G +H ++KMG ++ V N +++ Y+ C + A +VFDEM
Sbjct: 36 TFPAVLKSCAKFVGIGEGRQVHGVIIKMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEM 95
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
R++VSW+ +ISG+ +AG A+ F +M + PN F S + AC L G+ IH
Sbjct: 96 LVRDVVSWTGVISGYVRAGLFDEAVGLFLRMDVEPNAATFVSVLVACGRKGYLSVGKGIH 155
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
S K + V N+L+ MY+K G A V+ E E ++VS+ ++I+G V+ P+
Sbjct: 156 GLSFKSAFGVGLEVSNALMDMYVKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPK 215
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ E+F+ M G+ PD L C+ L G +H + ++ + +G ++
Sbjct: 216 EALELFQDMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMV 275
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K I + + F + K++++WN + + K L +F+EM G+RP++
Sbjct: 276 DMYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGLAMHGHAYKVLELFEEMVR-VGMRPNE 334
Query: 304 FTFASILAACAGLASVQHGKQ 324
TF +IL AC V G+Q
Sbjct: 335 VTFLAILTACCHCGLVNEGRQ 355
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 112/213 (52%), Gaps = 3/213 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + S+L C + L G +H K + VSN ++++Y KCG + A++VFD
Sbjct: 132 AATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYVKCGCLPGAKQVFD 191
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
E++E+++VSW+++ISG Q ALE F M + P+ I S +SACA + +L
Sbjct: 192 ELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIILTSVLSACARLGALDY 251
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ +H + + +G +++ MY K G ++ ++ N++++NAL+ G
Sbjct: 252 GRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGLAM 311
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
+ K E+F+ M+R G+ P+ +F L C
Sbjct: 312 HGHAYKVLELFEEMVRVGMRPNEVTFLAILTAC 344
>gi|115477555|ref|NP_001062373.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|50725675|dbj|BAD33141.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113624342|dbj|BAF24287.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|215697775|dbj|BAG91968.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 581
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 163/467 (34%), Positives = 273/467 (58%), Gaps = 4/467 (0%)
Query: 99 NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY 158
+ Y AISA A + SL G Q HA SLK AS SFV N+LI+MY Y + A LV
Sbjct: 92 DNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVL 151
Query: 159 GEA--FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSND 216
A + ++VS+N +IAG++ P K + F M ++ + D + L C+ +
Sbjct: 152 DSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGA 211
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
++ G + H L V E N ++G++++++Y+K ++ EA + F + E++++ W + IA
Sbjct: 212 MKVGSLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAG 271
Query: 277 CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
C+ +++ + +F++M GV+ DD T A+++++C + ++ G+ +HA+ L +
Sbjct: 272 CTQSGRFKEAVDLFRDM-QIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGK 330
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
++ V N+L++MY+KCG ++ +Y++F+ + R+V +W +I A + L AL LF QM+
Sbjct: 331 ELSVKNSLIDMYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQME 390
Query: 397 ATG-IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGK 455
+ P+ V F+G+LTAC+H GLV++G +F+ M K Y + P IEH+ C++DLLGRA
Sbjct: 391 GEDKVMPNEVIFLGVLTACSHGGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKL 450
Query: 456 LLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNL 515
L EAE++ K P+ D +V +LL ACR V + E A+++ L+P +VLLSN+
Sbjct: 451 LAEAEQFIKDMPVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQLEPKRCGGHVLLSNV 510
Query: 516 YASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
YA+ W DV R + +S K+P S IEV G +F + SH
Sbjct: 511 YATTLRWVDVNNVRTGMGNSRTSKKPGCSFIEVDGCIHEFFAGDESH 557
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 183/384 (47%), Gaps = 14/384 (3%)
Query: 13 SKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE--RNLVS 70
++ +L G HA LK+ + D V N ++N+Y+ C AR V D ++VS
Sbjct: 104 ARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWASDVVS 163
Query: 71 WSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSL 127
W+ +I+G+ + G AL+ F QM + +E + + ACA ++ G HA +
Sbjct: 164 WNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVV 223
Query: 128 KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE 187
G+ ++G+SL+SMY K G +A V+ E N+V + ++IAG ++ + ++ +
Sbjct: 224 LNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVD 283
Query: 188 VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYS 247
+F+ M G+ D + A + C L G LH L V N+++ +YS
Sbjct: 284 LFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYS 343
Query: 248 KFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFA 307
K + +A + F + ++D+ +W I + + L +F +M + V P++ F
Sbjct: 344 KCGDVNKAYQIFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVIFL 403
Query: 308 SILAACAGLASVQHGKQIHAHLIRM----RLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
+L AC+ V+ G + H RM L + +V++ + L++ + + +
Sbjct: 404 GVLTACSHGGLVEQG---YHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKD 460
Query: 364 M-LHRNVVSWNTII-AAHANHRLG 385
M + +VV W +++ A A+ ++G
Sbjct: 461 MPVAPDVVVWRSLLFACRASGQVG 484
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 143/280 (51%), Gaps = 6/280 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L C++T A++ G HA V+ G + + + + ++++YAKCG + AR+VF+ M
Sbjct: 198 TLLNVLVACARTGAMKVGSLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRM 257
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
ERN+V W++MI+G Q+G A++ F M + ++ A+ +S+C + +L G+
Sbjct: 258 PERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGR 317
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+HAY G V NSLI MY K G + A ++ + ++ ++ +I GF N
Sbjct: 318 YLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMGFAMNG 377
Query: 181 QPEKGFEVFKLMLRQG-LLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFV 238
+ ++F M + ++P+ F G L CS + +G H ++ L
Sbjct: 378 LCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGGLVEQGYHHFHRMSKVYNLVPRIEH 437
Query: 239 GNTIMALYSKFNLIGEAEKAFR-LIEEKDLISWNTFIAAC 277
++ L + L+ EAE+ + + D++ W + + AC
Sbjct: 438 YGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVVWRSLLFAC 477
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 179/557 (32%), Positives = 295/557 (52%), Gaps = 16/557 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
SLL C TK LQQ +H I NH+L+ + +F ++
Sbjct: 26 SLLKQCPSTKTLQQ---IHTQFTIHSIHK----PNHLLSQSISLKDFTYSTLIFSHITPH 78
Query: 67 -NLVSWSAMISGHHQAG-EHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQ 121
N +++ M+ ++ L L + QM L PN + F ACA ++ + +
Sbjct: 79 PNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARL 138
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
H K G + NS+++MY + G + A V+ E E +LVS+N+L++G+ +
Sbjct: 139 AHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGF 198
Query: 182 PEKGFEVF-KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ EVF +L G PD S L C DL G + V+ ++ N ++G+
Sbjct: 199 AREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGS 258
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++++YSK + + + F + +D I+WN I+A + ++ +S+F M ++GV
Sbjct: 259 ALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSM-KENGVD 317
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P+ T ++L+ACA + ++ GKQ+ + L D+ V AL++MYAKCG + + ++
Sbjct: 318 PNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRV 377
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG--IKPDSVTFIGLLTACNHAG 418
FN+M +N SWN +I+A A+H AL LFE+M G +P+ +TF+ LL+AC HAG
Sbjct: 378 FNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAG 437
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV EG F+ M +G+ P IEH++C++DLL RAG L EA + +K P D + LG L
Sbjct: 438 LVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGAL 497
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
SAC+ +++V IGER+ + L L P+ + Y++ S +Y + MW D A R +++++G+
Sbjct: 498 HSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVT 557
Query: 539 KEPSYSMIEVQGTFEKF 555
K P S IEV +F
Sbjct: 558 KTPGCSWIEVGNQLREF 574
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 196/418 (46%), Gaps = 13/418 (3%)
Query: 101 YIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGE 160
++ S + C ++L QQIH +F SI N L+S + + + + L++
Sbjct: 22 FLLLSLLKQCPSTKTL---QQIHT---QFTIHSIH-KPNHLLSQSISLKDFTYSTLIFSH 74
Query: 161 -AFEPNLVSFNALIAGFVENQQPEK-GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLR 218
PN +FN ++ ++ M + P+ F+F C+ ++R
Sbjct: 75 ITPHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIR 134
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
+ HC K L+++ N+++ +Y + G A K F I EKDL+SWN+ ++ +
Sbjct: 135 MARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYA 194
Query: 279 HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
+ + VF + + G PD+ + S+L AC L ++ G+ + ++ + +
Sbjct: 195 KLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNS 254
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
+G+AL++MY+KCG + S ++F+ M R+ ++WN I+A+A + + A+ LF MK
Sbjct: 255 YIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKEN 314
Query: 399 GIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLE 458
G+ P+ VT +L+AC G + G+ + G+ DI T LID+ + G L
Sbjct: 315 GVDPNKVTLTAVLSACASIGALDLGKQ-MDEYATHRGLQHDIFVATALIDMYAKCGSLES 373
Query: 459 AEEYTKKFPLGQDP---IVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLS 513
A+ P D ++ L S + + + + ER++ + +P + LLS
Sbjct: 374 AQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLS 431
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 112/213 (52%), Gaps = 5/213 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+ S+L C + L+ G + V++ G++ + + + ++++Y+KCG+++ +R++FD M
Sbjct: 221 SLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGM 280
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
R+ ++W+A IS + Q G A+ F M + PN+ + +SACA I +L G+
Sbjct: 281 PSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGK 340
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+ Y+ G FV +LI MY K G A V+ + N S+NA+I+ +
Sbjct: 341 QMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHG 400
Query: 181 QPEKGFEVFKLMLRQG--LLPDRFSFAGGLEIC 211
+ ++ +F+ M +G P+ +F L C
Sbjct: 401 KAKEALSLFERMSDEGGSARPNDITFVSLLSAC 433
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 7/197 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++++L C+ AL G + G+Q D+ V+ ++++YAKCG + A++VF++M
Sbjct: 322 TLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDM 381
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM-----HLLPNEYIFASAISACAGIQSLVK 118
+N SW+AMIS G+ AL F +M PN+ F S +SAC + +
Sbjct: 382 PRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDE 441
Query: 119 GQQI-HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE-PNLVSFNALIAGF 176
G ++ S FG + ++ + + G+ +A V + E P+ V+ AL +
Sbjct: 442 GYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSAC 501
Query: 177 VENQQPEKGFEVFKLML 193
+ + G V +++L
Sbjct: 502 QRKKNVDIGERVIQMLL 518
>gi|297607519|ref|NP_001060096.2| Os07g0578800 [Oryza sativa Japonica Group]
gi|255677918|dbj|BAF22010.2| Os07g0578800 [Oryza sativa Japonica Group]
Length = 967
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 171/518 (33%), Positives = 287/518 (55%), Gaps = 26/518 (5%)
Query: 70 SWSAMISGHHQAGEHLLALEFFSQMH--LLPNEYIFAS---AISACAGIQSLVKGQQIHA 124
SW+ I G+ L A+ F QM + P + AS A+ +CAG+ +HA
Sbjct: 331 SWAYQIRMAASQGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHA 390
Query: 125 YSLKFGYASISFVGNSLISMYMKV----------GYSSDALL----------VYGEAFEP 164
+++ G + F N+L+++ +K+ G S + L V+ E E
Sbjct: 391 LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLER 450
Query: 165 NLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILH 224
+ VS+N LI G E+++ ++ + + M R G +PD F+ + L I + D+++GM++H
Sbjct: 451 DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVH 510
Query: 225 CLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYE 284
+K +++ FVG++++ +Y+ + + K F + D + WN+ +A + E
Sbjct: 511 GYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVE 570
Query: 285 KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNAL 344
+ L +F+ M GVRP TF+S++ A L+ ++ GKQ+HA+LIR R N ++ + ++L
Sbjct: 571 EALGIFRRMLQ-AGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSL 629
Query: 345 VNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDS 404
++MY KCG + + ++FN + ++VSW +I +A H A LFE+M+ +KP+
Sbjct: 630 IDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNH 689
Query: 405 VTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTK 464
+TF+ +LTAC+HAGLV G YFNSM YG P +EH L D LGRAG L EA +
Sbjct: 690 ITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFIS 749
Query: 465 KFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGD 524
+ + V TLL ACR+ ++ V+ E +AK++F L+P + +V+LSN+Y++ G W +
Sbjct: 750 EMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNE 809
Query: 525 VAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
A RK ++ G+KKEP+ S IEV+ F + SH
Sbjct: 810 AAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSH 847
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 193/419 (46%), Gaps = 30/419 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKC------------- 50
S+ + L C+ SLHA ++ G D +N +LNL K
Sbjct: 368 SLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPS 427
Query: 51 --GKMILA-----RKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNE 100
G + A RKVFDEM ER+ VSW+ +I G + H AL +M +P+
Sbjct: 428 GEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDT 487
Query: 101 YIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGE 160
+ ++ + A + +G +H Y++K G+ + FVG+SLI MY ++ V+
Sbjct: 488 FTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDS 547
Query: 161 AFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKG 220
+ + V +N+++AG+ +N E+ +F+ ML+ G+ P +F+ + + LR G
Sbjct: 548 FSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLG 607
Query: 221 MILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHC 280
LH ++ + N F+ ++++ +Y K + A + F I+ D++SW I +
Sbjct: 608 KQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALH 667
Query: 281 ADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG-KQIHAHLIRMRLNQDVG 339
+ +F+ M + V+P+ TF ++L AC+ V +G K ++ + +
Sbjct: 668 GPTTEAFVLFERMELGN-VKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLE 726
Query: 340 VGNALVNMYAKCGLISCSYKLFNEMLHRNVVS-WNTIIAA---HANHRLGGS-ALKLFE 393
AL + + G + +Y +EM + S W+T++ A H N L A K+FE
Sbjct: 727 HCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFE 785
>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
Length = 590
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/473 (34%), Positives = 279/473 (58%), Gaps = 2/473 (0%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+ +AI+AC ++L +G+Q+HA + Y F+G L++MY++ G DA V
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
E ++VS+ +I+G+ + ++ + ++F MLR G +P+ ++ A L CS + +G
Sbjct: 73 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
+H L VK ES+ FVG++++ +Y+K I EA + F + E+D++S I+ +
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 192
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
E+ L +F+++ ++ G++ + TF +++ A +GLAS+ +GKQ+HA ++R L V + N
Sbjct: 193 DEEALDLFRQLYSE-GMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQN 251
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
+L++MY+KCG + S ++F+ ML R+VVSWN ++ + H LG + LF+ + +KP
Sbjct: 252 SLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKP 310
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
DSVT + +L+ C+H GLV EG F+++ K H+ C+IDLLGR+G+L +A
Sbjct: 311 DSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNL 370
Query: 463 TKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMW 522
+ P P + G+LL ACR+ +V +GE +A++L ++P YV+LSN+YA+ GMW
Sbjct: 371 IENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMW 430
Query: 523 GDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
DV RK++ + + KEP S I + F +E H +IN +K +
Sbjct: 431 KDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEI 483
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 204/391 (52%), Gaps = 11/391 (2%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C + +AL +G +HA ++ +P V + ++ +Y +CG + AR V D M ER++VSW
Sbjct: 20 CIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSW 79
Query: 72 SAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
+ MISG+ Q H+ AL+ F +M +PNEY A+ +++C+G QS+ +G+Q+H+ +K
Sbjct: 80 TTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVK 139
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
+ S FVG+SL+ MY K +A V+ E ++VS A+I+G+ + E+ ++
Sbjct: 140 TNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDL 199
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
F+ + +G+ + +F + S L G +H L ++ +L + N+++ +YSK
Sbjct: 200 FRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSK 259
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
+ + + F + E+ ++SWN + + +S+FK++ + V+PD T +
Sbjct: 260 CGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE--VKPDSVTLLA 317
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLN-QDVGVGNALVNMYAKCGLISCSYKLFNEMLHR 367
+L+ C+ V G I +++ + G ++++ + G + + L M
Sbjct: 318 VLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFE 377
Query: 368 NVVS-WNTIIAA---HANHRLGG-SALKLFE 393
+ S W +++ A HAN +G A KL E
Sbjct: 378 STPSIWGSLLGACRVHANVHVGELVAQKLLE 408
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 193/422 (45%), Gaps = 61/422 (14%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++++L CS +++ QG +H+ ++K + + V + +L++YAK + AR+VFD +
Sbjct: 113 TLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTL 172
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
ER++VS +A+ISG+ Q G AL+ F Q++ + N F + ++A +G+ SL G+
Sbjct: 173 PERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGK 232
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HA L+ + NSLI MY K G + V+ E ++VS+NA++ G+ +
Sbjct: 233 QVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHG 292
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK---LESNPF 237
+ +FK L + + PD + L CS + +G+ + VK + L + +
Sbjct: 293 LGHEVISLFK-DLHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHY 351
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
I+ L + G EKA LIE +E S+
Sbjct: 352 --GCIIDLLGRS---GRLEKALNLIEN----------------MPFESTPSI-------- 382
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
+ S+L AC A+V G+ + L+ M ++ G L N+YA G+
Sbjct: 383 --------WGSLLGACRVHANVHVGELVAQKLLEME-PENAGNYVILSNIYAAAGMWKDV 433
Query: 358 YKLFNEMLHRNVV-----SW----NTIIAAHANHR-------LGGSALKLFEQMKATGIK 401
+K+ ML + V SW I H++ R + ++F +KA G
Sbjct: 434 FKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFV 493
Query: 402 PD 403
PD
Sbjct: 494 PD 495
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 179/557 (32%), Positives = 295/557 (52%), Gaps = 16/557 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
SLL C TK LQQ +H I NH+L+ + +F ++
Sbjct: 26 SLLKQCPSTKTLQQ---IHTQFTIHSIHK----PNHLLSQSISLKDFTYSTLIFSHITPH 78
Query: 67 -NLVSWSAMISGHHQAG-EHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQ 121
N +++ M+ ++ L L + QM L PN + F ACA ++ + +
Sbjct: 79 PNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARL 138
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
H K G + NS+++MY + G + A V+ E E +LVS+N+L++G+ +
Sbjct: 139 AHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGF 198
Query: 182 PEKGFEVF-KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ EVF +L G PD S L C DL G + V+ ++ N ++G+
Sbjct: 199 AREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGS 258
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++++YSK + + + F + +D I+WN I+A + ++ +S+F M ++GV
Sbjct: 259 ALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMK-ENGVD 317
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P+ T ++L+ACA + ++ GKQ+ + L D+ V AL++MYAKCG + + ++
Sbjct: 318 PNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRV 377
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG--IKPDSVTFIGLLTACNHAG 418
FN+M +N SWN +I+A A+H AL LFE+M G +P+ +TF+ LL+AC HAG
Sbjct: 378 FNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAG 437
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV EG F+ M +G+ P IEH++C++DLL RAG L EA + +K P D + LG L
Sbjct: 438 LVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGAL 497
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
SAC+ +++V IGER+ + L L P+ + Y++ S +Y + MW D A R +++++G+
Sbjct: 498 HSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVT 557
Query: 539 KEPSYSMIEVQGTFEKF 555
K P S IEV +F
Sbjct: 558 KTPGCSWIEVGNQLREF 574
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 196/418 (46%), Gaps = 13/418 (3%)
Query: 101 YIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGE 160
++ S + C ++L QQIH +F SI N L+S + + + + L++
Sbjct: 22 FLLLSLLKQCPSTKTL---QQIHT---QFTIHSIH-KPNHLLSQSISLKDFTYSTLIFSH 74
Query: 161 -AFEPNLVSFNALIAGFVENQQPEK-GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLR 218
PN +FN ++ ++ M + P+ F+F C+ ++R
Sbjct: 75 ITPHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIR 134
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
+ HC K L+++ N+++ +Y + G A K F I EKDL+SWN+ ++ +
Sbjct: 135 MARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYA 194
Query: 279 HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
+ + VF + + G PD+ + S+L AC L ++ G+ + ++ + +
Sbjct: 195 KLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNS 254
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
+G+AL++MY+KCG + S ++F+ M R+ ++WN I+A+A + + A+ LF MK
Sbjct: 255 YIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKEN 314
Query: 399 GIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLE 458
G+ P+ VT +L+AC G + G+ + G+ DI T LID+ + G L
Sbjct: 315 GVDPNKVTLTAVLSACASIGALDLGKQ-MDEYATHRGLQHDIFVATALIDMYAKCGSLES 373
Query: 459 AEEYTKKFPLGQDP---IVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLS 513
A+ P D ++ L S + + + + ER++ + +P + LLS
Sbjct: 374 AQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLS 431
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 112/213 (52%), Gaps = 5/213 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+ S+L C + L+ G + V++ G++ + + + ++++Y+KCG+++ +R++FD M
Sbjct: 221 SLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGM 280
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
R+ ++W+A IS + Q G A+ F M + PN+ + +SACA I +L G+
Sbjct: 281 PSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGK 340
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+ Y+ G FV +LI MY K G A V+ + N S+NA+I+ +
Sbjct: 341 QMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHG 400
Query: 181 QPEKGFEVFKLMLRQG--LLPDRFSFAGGLEIC 211
+ ++ +F+ M +G P+ +F L C
Sbjct: 401 KAKEALSLFERMSDEGGSARPNDITFVSLLSAC 433
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 7/197 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++++L C+ AL G + G+Q D+ V+ ++++YAKCG + A++VF++M
Sbjct: 322 TLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDM 381
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM-----HLLPNEYIFASAISACAGIQSLVK 118
+N SW+AMIS G+ AL F +M PN+ F S +SAC + +
Sbjct: 382 PRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDE 441
Query: 119 GQQI-HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE-PNLVSFNALIAGF 176
G ++ S FG + ++ + + G+ +A V + E P+ V+ AL +
Sbjct: 442 GYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSAC 501
Query: 177 VENQQPEKGFEVFKLML 193
+ + G V +++L
Sbjct: 502 QRKKNVDIGERVIQMLL 518
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 191/562 (33%), Positives = 305/562 (54%), Gaps = 7/562 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+L ++QG LH LK G+ V+V+N ++ +Y K + AR+VFDEM
Sbjct: 209 TVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEM 268
Query: 64 SERNLVSWSAMISGH---HQAGEHL-LALEFFSQMHLLPNEYIFASAISACAGIQSLVKG 119
R+ VS++ MI G+ E + + LE Q P+ +S + AC ++ L
Sbjct: 269 DVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFK--PDLLTVSSVLRACGHLRDLSLA 326
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ I+ Y LK G+ S V N LI +Y K G A V+ + VS+N++I+G++++
Sbjct: 327 KYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQS 386
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ ++FK+M+ D ++ + + + DL+ G LH +K + + V
Sbjct: 387 GDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVS 446
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N ++ +Y+K +G++ K F + D ++WNT I+AC D+ GL V +M V
Sbjct: 447 NALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSE-V 505
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
PD TF L CA LA+ + GK+IH L+R ++ +GNAL+ MY+KCG + S +
Sbjct: 506 VPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSR 565
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F M R+VV+W +I A+ + G AL+ F M+ +GI PDSV FI ++ AC+H+GL
Sbjct: 566 VFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGL 625
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V EG A F M+ Y I P IEH+ C++DLL R+ K+ +AEE+ + P+ D + ++L
Sbjct: 626 VDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVL 685
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
ACR D+ ER+++++ L P +L SN YA+ W V+ RK LKD + K
Sbjct: 686 RACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITK 745
Query: 540 EPSYSMIEVQGTFEKFTVAEFS 561
P YS IEV F+ + S
Sbjct: 746 NPGYSWIEVGKNVHVFSSGDDS 767
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 127/456 (27%), Positives = 238/456 (52%), Gaps = 6/456 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S++ C+ + G ++ +L MG + D+ V N ++++Y++ G + AR+VFDEM
Sbjct: 108 TFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEM 167
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
R+LVSW+++ISG+ G + ALE + ++ ++P+ + +S + A + + +GQ
Sbjct: 168 PVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQ 227
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H ++LK G S+ V N L++MY+K +DA V+ E + VS+N +I G+++ +
Sbjct: 228 GLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLE 287
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E+ +F L Q PD + + L C DL ++ +K V N
Sbjct: 288 MVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN 346
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y+K + A F +E KD +SWN+ I+ D + + +FK M +
Sbjct: 347 ILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE-Q 405
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
D T+ +++ LA ++ GK +H++ I+ + D+ V NAL++MYAKCG + S K+
Sbjct: 406 ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKI 465
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+ M + V+WNT+I+A + L++ QM+ + + PD TF+ L C
Sbjct: 466 FSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAK 525
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+ G+ + + +G +++ LI++ + G L
Sbjct: 526 RLGKEIHCCLLR-FGYESELQIGNALIEMYSKCGCL 560
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 132/490 (26%), Positives = 247/490 (50%), Gaps = 8/490 (1%)
Query: 13 SKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE-RNLVSW 71
S + L + +HA V+ +G+ S +++ Y+ + + VF +S +N+ W
Sbjct: 15 SSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLW 74
Query: 72 SAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
+++I + G ALEF+ ++ + P++Y F S I ACAG+ G ++ L
Sbjct: 75 NSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILD 134
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
G+ S FVGN+L+ MY ++G + A V+ E +LVS+N+LI+G+ + E+ E+
Sbjct: 135 MGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEI 194
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
+ + ++PD F+ + L +++G LH +K + S V N ++A+Y K
Sbjct: 195 YHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLK 254
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
F +A + F ++ +D +S+NT I E+ + +F E N +PD T +S
Sbjct: 255 FRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE--NLDQFKPDLLTVSS 312
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
+L AC L + K I+ ++++ + V N L+++YAKCG + + +FN M ++
Sbjct: 313 VLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKD 372
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
VSWN+II+ + A+KLF+ M + D +T++ L++ +K G+ +
Sbjct: 373 TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHS 432
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDV 488
+ K+ GI D+ LID+ + G++ ++ + G D + T++SAC D
Sbjct: 433 NGIKS-GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG-DTVTWNTVISACVRFGDF 490
Query: 489 VIGERLAKQL 498
G ++ Q+
Sbjct: 491 ATGLQVTTQM 500
>gi|222619002|gb|EEE55134.1| hypothetical protein OsJ_02921 [Oryza sativa Japonica Group]
Length = 493
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 163/467 (34%), Positives = 273/467 (58%), Gaps = 4/467 (0%)
Query: 99 NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY 158
+ Y AISA A + SL G Q HA SLK AS SFV N+LI+MY Y + A LV
Sbjct: 4 DNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVL 63
Query: 159 GEA--FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSND 216
A + ++VS+N +IAG++ P K + F M ++ + D + L C+ +
Sbjct: 64 DSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGA 123
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
++ G + H L V E N ++G++++++Y+K ++ EA + F + E++++ W + IA
Sbjct: 124 MKVGSLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAG 183
Query: 277 CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
C+ +++ + +F++M GV+ DD T A+++++C + ++ G+ +HA+ L +
Sbjct: 184 CTQSGRFKEAVDLFRDM-QIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGK 242
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
++ V N+L++MY+KCG ++ +Y++F+ + R+V +W +I A + L AL LF QM+
Sbjct: 243 ELSVKNSLIDMYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQME 302
Query: 397 ATG-IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGK 455
+ P+ V F+G+LTAC+H GLV++G +F+ M K Y + P IEH+ C++DLLGRA
Sbjct: 303 GEDKVMPNEVIFLGVLTACSHGGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKL 362
Query: 456 LLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNL 515
L EAE++ K P+ D +V +LL ACR V + E A+++ L+P +VLLSN+
Sbjct: 363 LAEAEQFIKDMPVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQLEPKRCGGHVLLSNV 422
Query: 516 YASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
YA+ W DV R + +S K+P S IEV G +F + SH
Sbjct: 423 YATTLRWVDVNNVRTGMGNSRTSKKPGCSFIEVDGCIHEFFAGDESH 469
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 183/384 (47%), Gaps = 14/384 (3%)
Query: 13 SKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE--RNLVS 70
++ +L G HA LK+ + D V N ++N+Y+ C AR V D ++VS
Sbjct: 16 ARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWASDVVS 75
Query: 71 WSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSL 127
W+ +I+G+ + G AL+ F QM + +E + + ACA ++ G HA +
Sbjct: 76 WNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVV 135
Query: 128 KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE 187
G+ ++G+SL+SMY K G +A V+ E N+V + ++IAG ++ + ++ +
Sbjct: 136 LNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVD 195
Query: 188 VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYS 247
+F+ M G+ D + A + C L G LH L V N+++ +YS
Sbjct: 196 LFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYS 255
Query: 248 KFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFA 307
K + +A + F + ++D+ +W I + + L +F +M + V P++ F
Sbjct: 256 KCGDVNKAYQIFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVIFL 315
Query: 308 SILAACAGLASVQHGKQIHAHLIRM----RLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
+L AC+ V+ G + H RM L + +V++ + L++ + + +
Sbjct: 316 GVLTACSHGGLVEQG---YHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKD 372
Query: 364 M-LHRNVVSWNTII-AAHANHRLG 385
M + +VV W +++ A A+ ++G
Sbjct: 373 MPVAPDVVVWRSLLFACRASGQVG 396
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 143/280 (51%), Gaps = 6/280 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L C++T A++ G HA V+ G + + + + ++++YAKCG + AR+VF+ M
Sbjct: 110 TLLNVLVACARTGAMKVGSLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRM 169
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
ERN+V W++MI+G Q+G A++ F M + ++ A+ +S+C + +L G+
Sbjct: 170 PERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGR 229
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+HAY G V NSLI MY K G + A ++ + ++ ++ +I GF N
Sbjct: 230 YLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMGFAMNG 289
Query: 181 QPEKGFEVFKLMLRQG-LLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFV 238
+ ++F M + ++P+ F G L CS + +G H ++ L
Sbjct: 290 LCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGGLVEQGYHHFHRMSKVYNLVPRIEH 349
Query: 239 GNTIMALYSKFNLIGEAEKAFR-LIEEKDLISWNTFIAAC 277
++ L + L+ EAE+ + + D++ W + + AC
Sbjct: 350 YGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVVWRSLLFAC 389
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 170/511 (33%), Positives = 285/511 (55%), Gaps = 27/511 (5%)
Query: 90 FFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
+ ++ + + +I S + AC+ I G++IH +S+K G S FV N+L+ MY + G
Sbjct: 99 YMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECG 158
Query: 150 YSSDALLVYGEAFEPN----------------------LVSFNALIAGFVENQQPEKGFE 187
A L++ + E + +VS+ A+IAG++ E+G
Sbjct: 159 SLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGER 218
Query: 188 VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYS 247
+F M+ + + P+ + + C ++ G LH ++ + + ++ +Y
Sbjct: 219 LFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYG 278
Query: 248 KFNLIGEAEKAFRLIEEKDLISWNTFIAACS--HCADYEKGLSVFKEMSNDHGVRPDDFT 305
K I A F ++ KD+++W I+A + +C DY +F +M D+GVRP++ T
Sbjct: 279 KCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDY--AFQLFVQM-RDNGVRPNELT 335
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
S+L+ CA ++ GK HA++ + + DV + AL++MYAKCG IS + +LF+E +
Sbjct: 336 MVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAI 395
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
R++ +WN ++A + H G ALKLF +M+ G+KP+ +TFIG L AC+HAGLV EG+
Sbjct: 396 DRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKG 455
Query: 426 YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLR 485
F M +G+ P +EH+ C++DLLGRAG L EA + + P+ + + G +L+AC++
Sbjct: 456 LFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIH 515
Query: 486 RDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSM 545
++ +GE A++L L+P VL+SN+YA+ W DVAG RK +KD+G+KKEP S
Sbjct: 516 KNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPGMSS 575
Query: 546 IEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
IEV G F + + +H I +I+ ML +S
Sbjct: 576 IEVNGLVHDFKMGDTAHPLIEKISEMLAEMS 606
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 200/416 (48%), Gaps = 31/416 (7%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
I S+L CS+ + G +H +K G+ DV V N ++ +Y++CG ++ AR +FD+MS
Sbjct: 112 IPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMS 171
Query: 65 ERNLVSWS----------------------AMISGHHQAGEHLLALEFFSQM---HLLPN 99
ER++VSWS AMI+G+ + + F +M ++ PN
Sbjct: 172 ERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPN 231
Query: 100 EYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG 159
+ S I +C + ++ G+++HAY L+ G+ + +L+ MY K G A ++
Sbjct: 232 DITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFD 291
Query: 160 EAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRK 219
+++++ A+I+ + + + F++F M G+ P+ + L +C+V+ L
Sbjct: 292 SMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDM 351
Query: 220 GMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSH 279
G H K +E + + ++ +Y+K I A++ F ++D+ +WN +A
Sbjct: 352 GKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGM 411
Query: 280 CADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR-MRLNQDV 338
EK L +F EM GV+P+D TF L AC+ V GK + +I L V
Sbjct: 412 HGYGEKALKLFTEMET-LGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKV 470
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSALK 390
+V++ + GL+ +YK+ M + N+ W ++AA H N +G A +
Sbjct: 471 EHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMGELAAR 526
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 151/303 (49%), Gaps = 24/303 (7%)
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
P + M + + D F L+ CS + R G +H +VK L S+ FV N
Sbjct: 89 HPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVN 148
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNT----------------------FIAACS 278
+M +YS+ + A F + E+D++SW+T IA
Sbjct: 149 ALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYI 208
Query: 279 HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
C D E+G +F M ++ V P+D T S++ +C + +VQ GK++HA+++R +
Sbjct: 209 RCNDLEEGERLFVRMIEEN-VFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSL 267
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
+ ALV+MY KCG I + +F+ M +++V++W +I+A+A A +LF QM+
Sbjct: 268 ALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDN 327
Query: 399 GIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLE 458
G++P+ +T + LL+ C G + G+ +F++ G+ D+ T LID+ + G +
Sbjct: 328 GVRPNELTMVSLLSLCAVNGALDMGK-WFHAYIDKQGVEVDVILKTALIDMYAKCGDISG 386
Query: 459 AEE 461
A+
Sbjct: 387 AQR 389
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 186/556 (33%), Positives = 296/556 (53%), Gaps = 37/556 (6%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
++H+ ++ ++ + + ++ YA + ARKVFDE+ ERN++ + MI + G
Sbjct: 60 TVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNG 119
Query: 83 EHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
+ ++ F M ++ P+ Y F + AC+ ++V G++IH + K G +S FVGN
Sbjct: 120 FYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGN 179
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
L+SMY K G+ S+A LV E ++VS+N+L+ G+ +NQ+ + EV + M
Sbjct: 180 GLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM------- 232
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
E +S+D G + L P V NT N++ + F
Sbjct: 233 ---------ESVKISHD--AGTMASLL---------PAVSNTTTE-----NVMYVKDMFF 267
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
++ +K L+SWN I A + + ++ M D G PD + S+L AC +++
Sbjct: 268 KM-GKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEAD-GFEPDAVSITSVLPACGDTSAL 325
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
GK+IH ++ R +L ++ + NAL++MYAKCG + + +F M R+VVSW +I+A+
Sbjct: 326 SLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAY 385
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
G A+ LF +++ +G+ PDS+ F+ L AC+HAGL++EG + F M Y I+P
Sbjct: 386 GFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPR 445
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLF 499
+EH C++DLLGRAGK+ EA + + + + V G LL ACR+ D IG A +LF
Sbjct: 446 LEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLF 505
Query: 500 HLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAE 559
L P + YVLLSN+YA G W +V R ++K GLKK P S +EV F V +
Sbjct: 506 QLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGD 565
Query: 560 FSHSKIGEINYMLKTL 575
SH + EI L L
Sbjct: 566 RSHPQSDEIYRELDVL 581
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 190/453 (41%), Gaps = 62/453 (13%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L CS + + G +H + K+G+ + V N ++++Y KCG + AR V DEMS R+
Sbjct: 146 VLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRD 205
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSL 127
+VSW++++ G+ Q ALE +M + IS AG + +
Sbjct: 206 VVSWNSLVVGYAQNQRFDDALEVCREME--------SVKISHDAGTMASL---------- 247
Query: 128 KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE 187
+ V N+ M Y D G+ +LVS+N +I +++N P + E
Sbjct: 248 ------LPAVSNTTTENVM---YVKDMFFKMGKK---SLVSWNVMIGVYMKNAMPVEAVE 295
Query: 188 VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYS 247
++ M G PD S L C ++ L G +H + KL N + N ++ +Y+
Sbjct: 296 LYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYA 355
Query: 248 KFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFA 307
K + +A F ++ +D++SW I+A +++F ++ D G+ PD F
Sbjct: 356 KCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKL-QDSGLVPDSIAFV 414
Query: 308 SILAACAGLASVQHGKQ-----IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+ LAAC+ ++ G+ + I RL +V++ + G + +Y+
Sbjct: 415 TTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLA----CMVDLLGRAGKVKEAYRFIQ 470
Query: 363 EM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+M + N W ++ A H S T IGLL A L
Sbjct: 471 DMSMEPNERVWGALLGACRVH---------------------SDTDIGLLAADKLFQLAP 509
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
E Y+ + Y + E T + +++ G
Sbjct: 510 EQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKG 542
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A SI+S+L C T AL G +H + + + P++++ N ++++YAKCG + AR VF+
Sbjct: 309 AVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFE 368
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
M R++VSW+AMIS + +G A+ FS++ L+P+ F + ++AC+ L +
Sbjct: 369 NMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEE 428
Query: 119 GQ 120
G+
Sbjct: 429 GR 430
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 16/209 (7%)
Query: 323 KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH 382
+ +H+ +I L + +G L+ YA ++ + K+F+E+ RNV+ N +I ++ N+
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 383 RLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEH 442
G +K+F M ++PD TF +L AC+ +G + G S K G+S +
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKV-GLSSTLFV 177
Query: 443 FTCLIDLLGRAGKLLEA----EEYTKKFPLGQDPIVLG--------TLLSACRLRRDVVI 490
L+ + G+ G L EA +E +++ + + +V+G L CR V I
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKI 237
Query: 491 GE---RLAKQLFHLQPTTTSPYVLLSNLY 516
+A L + TTT + + +++
Sbjct: 238 SHDAGTMASLLPAVSNTTTENVMYVKDMF 266
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 185/547 (33%), Positives = 292/547 (53%), Gaps = 20/547 (3%)
Query: 34 QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQ 93
+ DV N +L+ YA+ G + AR+VFD M E+N VSW+A++S + Q + A F
Sbjct: 149 ERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGS 208
Query: 94 MHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV--GNSLISMYMKVGYS 151
+ +S + VK ++I F + V N++I+ Y + G
Sbjct: 209 RENW-------ALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEI 261
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
+A ++ E+ ++ ++ A+++G+++N+ E+ E+F M P+R + +
Sbjct: 262 DEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRM------PERNEVSWNAMLA 315
Query: 212 SVSNDLRKGMILHCLTV-KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
R M V C+ N NT++ Y++ I EA+ F + ++D +SW
Sbjct: 316 GYVQGERVEMAKELFDVMPCR---NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSW 372
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
IA S + L +F M + G R + +F+S L+ CA + +++ GKQ+H L+
Sbjct: 373 AAMIAGYSQSGHSYEALRLFVLMEREGG-RLNRSSFSSALSTCADVVALELGKQLHGRLV 431
Query: 331 RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALK 390
+ VGNAL+ MY KCG I + LF EM +++VSWNT+IA ++ H G AL+
Sbjct: 432 KGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALR 491
Query: 391 LFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLL 450
FE MK G+KPD T + +L+AC+H GLV +G YF++M + YG+ P+ +H+ C++DLL
Sbjct: 492 FFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLL 551
Query: 451 GRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYV 510
GRAG L EA K P D + GTLL A R+ + + E A ++F ++P + YV
Sbjct: 552 GRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYV 611
Query: 511 LLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINY 570
LLSNLYAS G WGDV R ++D G+KK P YS IE+Q F+V + H + EI
Sbjct: 612 LLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFA 671
Query: 571 MLKTLSL 577
L+ L L
Sbjct: 672 FLEDLDL 678
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 177/407 (43%), Gaps = 28/407 (6%)
Query: 11 HCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVS 70
H SK+ Q L D+ N ++ Y + G+ A +VF M + VS
Sbjct: 33 HSSKSSTQTQIQKSQTKPLPKSGDSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVS 92
Query: 71 WSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFG 130
++AMISG+ + GE LA F +M P + +S I+ V+ + + F
Sbjct: 93 YNAMISGYLRNGEFELARMLFDEM---PERDL----VSWNVMIKGYVRNRNLGKARELFE 145
Query: 131 YASISFV--GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
V N+++S Y + G DA V+ E N VS+NAL++ +V+N + E+ +
Sbjct: 146 RMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVL 205
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG-NTIMALYS 247
F R ++A C + ++K I+ ++ V NTI+ Y+
Sbjct: 206 F---------GSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYA 256
Query: 248 KFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFA 307
+ I EA + F D+ +W ++ E+ +F M + V ++
Sbjct: 257 QNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEV-----SWN 311
Query: 308 SILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR 367
++LA V+ K+ L + ++V N ++ YA+CG IS + LF++M R
Sbjct: 312 AMLAGYVQGERVEMAKE----LFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR 367
Query: 368 NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ VSW +IA ++ AL+LF M+ G + + +F L+ C
Sbjct: 368 DPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTC 414
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 5/176 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S SS L C+ AL+ G LH ++K G + V N +L +Y KCG + A +F EM
Sbjct: 406 SFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM 465
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+ +++VSW+ MI+G+ + G AL FF M L P++ + +SAC+ + KG+
Sbjct: 466 AGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGR 525
Query: 121 Q-IHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIA 174
Q H + +G S ++ + + G +A L+ FEP+ + L+
Sbjct: 526 QYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLG 581
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
NA+++ Y + G + LF+EM R++VSWN +I + +R G A +LFE+M +
Sbjct: 94 NAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMP----E 149
Query: 402 PDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
D ++ +L+ G V + F+ M + +S
Sbjct: 150 RDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVS 185
>gi|357116106|ref|XP_003559825.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial-like [Brachypodium distachyon]
Length = 739
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 181/567 (31%), Positives = 298/567 (52%), Gaps = 19/567 (3%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
LHA + G+ DV V N ++ Y++ + AR+VFDEM R+LVSW+AMI G Q G+
Sbjct: 162 LHALASRSGLVADVFVGNALVTAYSRGALLGAARRVFDEMPARDLVSWNAMICGLAQDGD 221
Query: 84 --HLLALEFFSQMH-----LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF 136
+ L F + + P+ S I AC + G+Q+H++++K G
Sbjct: 222 CPTEVILVFLRLLKDGGAAVRPDRISVCSVIPACGSEGKIELGRQVHSFTVKLGVEGKVS 281
Query: 137 VGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
+GN L++MY K G + A + E +++S+ I+ E E E+F M + G
Sbjct: 282 IGNVLVAMYYKSGAAGCARKLLKSMDERDVISWTTAISMDGE----EDAIELFNGMRQDG 337
Query: 197 LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAE 256
+ P+ +F + + R G ++H + +K + N+++ +Y+K + +A
Sbjct: 338 VPPNEVTFVALMSALAAGCPARYGQMIHTVCLKTGVSDEAAAANSLITMYAKLRRMDDAR 397
Query: 257 KAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
F + ++I+WN I+ + + L VF M +RP++ TFAS+L+A +
Sbjct: 398 TVFDRMPRPEIIAWNALISGYAQNELCNEALQVFSCMV--RCLRPNETTFASVLSAVTAV 455
Query: 317 ASVQ--HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNT 374
+V +G+ H +++ L V AL++MYAK G + S K F+ +HR++++W
Sbjct: 456 ETVSMAYGEMYHCQSLKLGLKVSEYVSGALIDMYAKRGSLEESRKAFDVTVHRSLIAWTA 515
Query: 375 IIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTY 434
II+AHA H + + LF+ M +G+ PD V + +LTAC H+G V G F+SM +
Sbjct: 516 IISAHAKHGNYDTVMNLFDDMVCSGVAPDGVVLLSVLTACRHSGAVNTGREIFDSMPAEH 575
Query: 435 GISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERL 494
+ P EH+ C+ID+LGRAG+L EAEE + P G L +LL ACR+ + I ER+
Sbjct: 576 HVEPWPEHYACVIDMLGRAGRLEEAEELMLQMPTGPSVSALQSLLGACRIHGNTSIAERV 635
Query: 495 AKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGT--- 551
A L +PT + YVLLSN+YA G WG VA R+ +++ G++KE +S ++
Sbjct: 636 AGILTETEPTESGAYVLLSNIYAEKGDWGGVAKVRREMREKGVRKEIGFSWVDFGAGESL 695
Query: 552 -FEKFTVAEFSHSKIGEINYMLKTLSL 577
KF+ + +H EI + + L L
Sbjct: 696 HLHKFSSDDTTHPCTEEIYRVAEGLGL 722
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 218/459 (47%), Gaps = 29/459 (6%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMIL-ARKVFDEMSERNLVSWSAMISGHHQA 81
+LH + G+ V+N + YAK A KVF R++ S++ ++S
Sbjct: 58 ALHGLAIASGLDAFSFVTNSLAARYAKSASSFPSAAKVFHTARARDVSSYNTILSALPDR 117
Query: 82 GEHLLALEFFSQM----HLLPNEYIFASAISACAG---IQSLVKGQQIHAYSLKFGYASI 134
GE AL F + M + P+ A+S A + +Q+HA + + G +
Sbjct: 118 GE---ALAFAAWMLRSGDVRPDAVTLTVALSLAASRGEADGVWIVRQLHALASRSGLVAD 174
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ-PEKGFEVFKLML 193
FVGN+L++ Y + A V+ E +LVS+NA+I G ++ P + VF +L
Sbjct: 175 VFVGNALVTAYSRGALLGAARRVFDEMPARDLVSWNAMICGLAQDGDCPTEVILVFLRLL 234
Query: 194 RQG---LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN 250
+ G + PDR S + C + G +H TVK +E +GN ++A+Y K
Sbjct: 235 KDGGAAVRPDRISVCSVIPACGSEGKIELGRQVHSFTVKLGVEGKVSIGNVLVAMYYKSG 294
Query: 251 LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
G A K + ++E+D+ISW T I+ E + +F M D GV P++ TF +++
Sbjct: 295 AAGCARKLLKSMDERDVISWTTAISMDGE----EDAIELFNGMRQD-GVPPNEVTFVALM 349
Query: 311 AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVV 370
+A A ++G+ IH ++ ++ + N+L+ MYAK + + +F+ M ++
Sbjct: 350 SALAAGCPARYGQMIHTVCLKTGVSDEAAAANSLITMYAKLRRMDDARTVFDRMPRPEII 409
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE--GEAYF- 427
+WN +I+ +A + L AL++F M ++P+ TF +L+A V GE Y
Sbjct: 410 AWNALISGYAQNELCNEALQVFSCM-VRCLRPNETTFASVLSAVTAVETVSMAYGEMYHC 468
Query: 428 NSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
S++ +S + LID+ + G L EE K F
Sbjct: 469 QSLKLGLKVSEYVS--GALIDMYAKRGSL---EESRKAF 502
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 172/327 (52%), Gaps = 11/327 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+ S++ C ++ G +H+ +K+G++ V + N ++ +Y K G ARK+ M
Sbjct: 247 SVCSVIPACGSEGKIELGRQVHSFTVKLGVEGKVSIGNVLVAMYYKSGAAGCARKLLKSM 306
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
ER+++SW+ IS GE A+E F+ M + PNE F + +SA A GQ
Sbjct: 307 DERDVISWTTAIS---MDGEE-DAIELFNGMRQDGVPPNEVTFVALMSALAAGCPARYGQ 362
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IH LK G + + NSLI+MY K+ DA V+ P ++++NALI+G+ +N+
Sbjct: 363 MIHTVCLKTGVSDEAAAANSLITMYAKLRRMDDARTVFDRMPRPEIIAWNALISGYAQNE 422
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSV--SNDLRKGMILHCLTVKCKLESNPFV 238
+ +VF M+R L P+ +FA L + + + G + HC ++K L+ + +V
Sbjct: 423 LCNEALQVFSCMVR-CLRPNETTFASVLSAVTAVETVSMAYGEMYHCQSLKLGLKVSEYV 481
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++ +Y+K + E+ KAF + + LI+W I+A + +Y+ +++F +M G
Sbjct: 482 SGALIDMYAKRGSLEESRKAFDVTVHRSLIAWTAIISAHAKHGNYDTVMNLFDDMVCS-G 540
Query: 299 VRPDDFTFASILAACAGLASVQHGKQI 325
V PD S+L AC +V G++I
Sbjct: 541 VAPDGVVLLSVLTACRHSGAVNTGREI 567
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 189/625 (30%), Positives = 309/625 (49%), Gaps = 74/625 (11%)
Query: 25 HAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEH 84
HA +LK G Q D +S ++ Y+ A + + + + S+S++I +A
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLF 97
Query: 85 LLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSL 141
++ FS+M L+P+ ++ + CA + + G+QIH + G +FV SL
Sbjct: 98 SQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSL 157
Query: 142 ISMYMKVGYSSDALLVYGE-----------------------------------AFEPNL 166
MYM+ G DA V+ EPN+
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNI 217
Query: 167 VSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCL 226
VS+N +++GF + ++ +F+ M G PD+ + + L S +L G +H
Sbjct: 218 VSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGY 277
Query: 227 TVKCKLESNPFVGNTIMALY-------------------------------SKFNLIGEA 255
+K L + V + ++ +Y S+ L+ +A
Sbjct: 278 VIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKA 337
Query: 256 EKAFRLIEEK----DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ F L +E+ +++SW + IA C+ + L +F+EM GV+P+ T S+L
Sbjct: 338 LEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQV-AGVKPNRVTIPSMLP 396
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
AC +A++ HG+ H +R+ L DV VG+AL++MYAKCG I S +FN M +N+V
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVC 456
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
WN+++ ++ H + +FE + T +KPD ++F LL+AC GL EG YFN M
Sbjct: 457 WNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMS 516
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
+ YGI P +EH++C+++LLGRAGKL EA + K+ P D V G LL++CRL+ +V +
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLA 576
Query: 492 ERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGT 551
E A++LFHL+P YVL+SN+YA+ GMW +V R ++ GLKK P S I+V+
Sbjct: 577 EIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNK 636
Query: 552 FEKFTVAEFSHSKIGEINYMLKTLS 576
+ SH +I +I + +S
Sbjct: 637 VYTLLACDKSHPQIDQITEKMDEIS 661
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 191/438 (43%), Gaps = 83/438 (18%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+ +L C++ A + G +H G+ D V + ++Y +CG+M ARKVFD MS
Sbjct: 119 LPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMS 178
Query: 65 ER-----------------------------------NLVSWSAMISGHHQAGEHLLALE 89
E+ N+VSW+ ++SG +++G H A+
Sbjct: 179 EKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVI 238
Query: 90 FFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYM 146
F +MH L P++ +S + + ++L G+QIH Y +K G V ++++ MY
Sbjct: 239 MFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYG 298
Query: 147 KVGY-------------------------------SSDALLVYG----EAFEPNLVSFNA 171
K G+ AL ++G + E N+VS+ +
Sbjct: 299 KSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTS 358
Query: 172 LIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK 231
+IAG +N + + E+F+ M G+ P+R + L C L G H V+
Sbjct: 359 IIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVH 418
Query: 232 LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK 291
L + VG+ ++ +Y+K I ++ F ++ K+L+ WN+ + S ++ +S+F+
Sbjct: 419 LLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFE 478
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL-----IRMRLNQDVGVGNALVN 346
+ ++PD +F S+L+AC + G + + I+ RL + +VN
Sbjct: 479 SLMRTR-LKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEH----YSCMVN 533
Query: 347 MYAKCGLISCSYKLFNEM 364
+ + G + +Y L E+
Sbjct: 534 LLGRAGKLQEAYDLIKEI 551
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 176/409 (43%), Gaps = 72/409 (17%)
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
K Q HA LK G + ++ LI+ Y +DA L+ +P + SF++LI
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALT 92
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ + + VF M GL+PD ++C+ + + G +HC+ L+ + F
Sbjct: 93 KAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAF 152
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKD------------------------------- 266
V ++ +Y + +G+A K F + EKD
Sbjct: 153 VQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSG 212
Query: 267 ----LISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG 322
++SWN ++ + +++ + +F++M + G PD T +S+L + ++ G
Sbjct: 213 IEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHH-LGFCPDQVTVSSVLPSVGDSENLNMG 271
Query: 323 KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM------------------ 364
+QIH ++I+ L +D V +A+++MY K G + KLF+E
Sbjct: 272 RQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRN 331
Query: 365 -----------------LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTF 407
+ NVVSW +IIA A + AL+LF +M+ G+KP+ VT
Sbjct: 332 GLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTI 391
Query: 408 IGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+L AC + + G + + + + D+ + LID+ + G++
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVH-LLDDVHVGSALIDMYAKCGRI 439
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 142/325 (43%), Gaps = 62/325 (19%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+L ++ L G +H V+K G+ D V + +L++Y K G + K+FDE
Sbjct: 254 TVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEF 313
Query: 64 S-----------------------------------ERNLVSWSAMISGHHQAGEHLLAL 88
E N+VSW+++I+G Q G+ + AL
Sbjct: 314 EMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEAL 373
Query: 89 EFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMY 145
E F +M + PN S + AC I +L G+ H ++++ VG++LI MY
Sbjct: 374 ELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMY 433
Query: 146 MKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA 205
K G + +V+ NLV +N+L+ G+ + + ++ +F+ ++R L PD SF
Sbjct: 434 AKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFT 493
Query: 206 GGLEICSVSNDLRKG-----MILHCLTVKCKLESNPFVGNTIMALYS-KFNLIGEA---E 256
L C +G M+ +K +LE YS NL+G A +
Sbjct: 494 SLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEH-----------YSCMVNLLGRAGKLQ 542
Query: 257 KAFRLIE----EKDLISWNTFIAAC 277
+A+ LI+ E D W + +C
Sbjct: 543 EAYDLIKEIPFEPDSCVWGALLNSC 567
>gi|356502400|ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 591
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 189/584 (32%), Positives = 302/584 (51%), Gaps = 45/584 (7%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVL--NLYAKCGKMILARKVFDEMS 64
SLL C L+Q + A + G+Q D + N ++ ++ + G A ++F+ +
Sbjct: 13 SLLKSCKSMSQLKQ---IQAHIFCFGLQQDRDILNKLMAFSMDSSLGDFNYANRIFNHIH 69
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQ 121
+L ++ MI + G A+ F Q+ + P+ Y + + I + +G++
Sbjct: 70 HPSLFIYNLMIKAFVKRGSLRSAISLFQQLRERGVWPDNYTYPYVLKGIGCIGEVREGEK 129
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
IHA+ +K G +V NSL+ MY ++G V+ E E + VS+N +I+G+V ++
Sbjct: 130 IHAFVVKTGLEFDPYVCNSLMDMYAELGLVEGFTQVFEEMPERDAVSWNIMISGYVRCKR 189
Query: 182 PEKGFEVFKLM-LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E+ +V++ M + P+ + L C+V +L G +H +L+ P +GN
Sbjct: 190 FEEAVDVYRRMQMESNEKPNEATVVSTLSACAVLRNLELGKEIHDYIAN-ELDLTPIMGN 248
Query: 241 TIMALYSK----------------------------FNLIGEAEKAFRLIEE---KDLIS 269
++ +Y K + + G+ ++A L E +D++
Sbjct: 249 ALLDMYCKCGCVSVAREIFDAMIVKNVNCWTSMVTGYVICGQLDQARYLFERSPSRDVVL 308
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
W I +E +++F EM GV PD F ++L CA L +++ GK IH ++
Sbjct: 309 WTAMINGYVQFNHFEDAIALFGEM-QIRGVEPDKFIVVTLLTGCAQLGALEQGKWIHNYI 367
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
R+ D V AL+ MYAKCG I S ++FN + + SW +II A + AL
Sbjct: 368 DENRIKMDAVVSTALIEMYAKCGCIEKSLEIFNGLKDMDTTSWTSIICGLAMNGKTSEAL 427
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
+LFE M+ G+KPD +TF+ +L+AC HAGLV+EG F+SM Y I P++EH+ C IDL
Sbjct: 428 ELFEAMQTCGLKPDDITFVAVLSACGHAGLVEEGRKLFHSMSSIYHIEPNLEHYGCFIDL 487
Query: 450 LGRAGKLLEAEEYTKKFPLGQDPIVL---GTLLSACRLRRDVVIGERLAKQLFHLQPTTT 506
LGRAG L EAEE KK P + I++ G LLSACR ++ +GERLA L ++ + +
Sbjct: 488 LGRAGLLQEAEELVKKLPDQNNEIIVPLYGALLSACRTYGNIDMGERLATALAKVKSSDS 547
Query: 507 SPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQG 550
S + LL+++YAS W DV R +KD G+KK P YS IEV G
Sbjct: 548 SLHTLLASIYASADRWEDVRKVRSKMKDLGIKKVPGYSAIEVDG 591
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 69/121 (57%), Gaps = 3/121 (2%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+ +LL C++ AL+QG +H + + I+ D +VS ++ +YAKCG + + ++F+ +
Sbjct: 344 VVTLLTGCAQLGALEQGKWIHNYIDENRIKMDAVVSTALIEMYAKCGCIEKSLEIFNGLK 403
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQ 121
+ + SW+++I G G+ ALE F M L P++ F + +SAC + +G++
Sbjct: 404 DMDTTSWTSIICGLAMNGKTSEALELFEAMQTCGLKPDDITFVAVLSACGHAGLVEEGRK 463
Query: 122 I 122
+
Sbjct: 464 L 464
>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
Length = 844
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 183/574 (31%), Positives = 301/574 (52%), Gaps = 20/574 (3%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++ S+L C + + G +H LK G DV V+ +++LY++ + AR +FDE
Sbjct: 87 RTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDE 143
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQI 122
M R++ SW+AMISG+ Q+G AL + + + + S +SAC +G I
Sbjct: 144 MPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM-DSVTVVSLLSACTEAGDFNRGVTI 202
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H+YS+K G S L+ D V+ + +L+S+N++I + N+QP
Sbjct: 203 HSYSIKHGLES------ELLR---------DCQKVFDRMYVRDLISWNSIIKAYELNEQP 247
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV-KCKLESNPFVGNT 241
+ +F+ M + PD + I S D+R + T+ K + +GN
Sbjct: 248 LRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNA 307
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y+K L+ A F + D+ISWNT I+ + + + ++ M + +
Sbjct: 308 VVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAA 367
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
+ T+ S+L AC+ +++ G ++H L++ L DV V +L +MY KCG + + LF
Sbjct: 368 NQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLF 427
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
++ N V WNT+IA H H G A+ LF++M G+KPD +TF+ LL+AC+H+GLV
Sbjct: 428 YQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVD 487
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
EG+ F M+ YGI+P ++H+ C++D+ GRAG+L A ++ K L D + G LLSA
Sbjct: 488 EGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 547
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
CR+ +V +G+ ++ LF ++P +VLLSN+YAS G W V R + GL+K P
Sbjct: 548 CRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTP 607
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+S +EV E F +H E+ L L
Sbjct: 608 GWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTAL 641
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 221/433 (51%), Gaps = 39/433 (9%)
Query: 34 QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFS- 92
QP+V S HV +L KM FD + R++ +W+ MISG+ +AG + FS
Sbjct: 23 QPNV--STHV-SLSPNKSKM----HTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSL 75
Query: 93 ---QMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
L P+ F S + AC ++++ G +IH +LKFG+ +V SLI +Y +
Sbjct: 76 FMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYK 132
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP-DRFSFAGGL 208
+A +++ E ++ S+NA+I+G+ ++ ++ L L GL D + L
Sbjct: 133 AVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA-----LTLSNGLRAMDSVTVVSLL 187
Query: 209 EICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLI 268
C+ + D +G+ +H ++K LES L+ + +K F + +DLI
Sbjct: 188 SACTEAGDFNRGVTIHSYSIKHGLES---------------ELLRDCQKVFDRMYVRDLI 232
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
SWN+ I A + +S+F+EM ++PD T S+ + + L ++ + +
Sbjct: 233 SWNSIIKAYELNEQPLRAISLFQEMRLSR-IQPDCLTLISLASILSQLGDIRACRSVQGF 291
Query: 329 LIRM-RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGS 387
+R +D+ +GNA+V MYAK GL+ + +FN + + +V+SWNTII+ +A +
Sbjct: 292 TLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASE 351
Query: 388 ALKLFEQMKATG-IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCL 446
A++++ M+ G I + T++ +L AC+ AG +++G + K G+ D+ T L
Sbjct: 352 AIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSL 410
Query: 447 IDLLGRAGKLLEA 459
D+ G+ G+L +A
Sbjct: 411 ADMYGKCGRLEDA 423
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 8/229 (3%)
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F I+ +D+ +WN I+ + + + F G+ PD TF S+L AC
Sbjct: 41 TFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---R 97
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
+V G +IH ++ DV V +L+++Y++ + + LF+EM R++ SWN +I+
Sbjct: 98 TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMIS 157
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
+ AL L ++A DSVT + LL+AC AG G +S +G+
Sbjct: 158 GYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRG-VTIHSYSIKHGLE 212
Query: 438 PDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRR 486
++ + L+ K + L + P+ +L RL R
Sbjct: 213 SELLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSR 261
>gi|449464466|ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216349
[Cucumis sativus]
Length = 1830
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 170/549 (30%), Positives = 299/549 (54%), Gaps = 31/549 (5%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S +L CS+ + + +G +H ++K+G PD V ++++Y KCG++ + VF+E+ +
Sbjct: 1222 SIILKACSELREIVEGRKVHCQIVKVG-GPDSFVMTGLIDMYGKCGQVECSSAVFEEIMD 1280
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
+N+VSW++MI+G+ Q L F++M + N + S I+A +++L +G+ +
Sbjct: 1281 KNVVSWTSMIAGYVQNNCAEEGLVLFNRMRDALVESNPFTLGSIINAFTKLRALHQGKWV 1340
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H Y++K SF+ + + MY+K G + DA ++Y E +LVS+ +I G+ + +QP
Sbjct: 1341 HGYAIKNIAELSSFLATTFLDMYVKCGQTRDARMIYDELPTIDLVSWTVMIVGYTQARQP 1400
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
G +F +R LLP+ +L + + N +
Sbjct: 1401 NDGLRLFADEIRSDLLPN-------------------SALLQVFFQRVRFL------NAL 1435
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y+K + I +A F + EKD+I+WN+ I+ + L +F +M + + + PD
Sbjct: 1436 IDMYAKCHTISDAYAIFHGVLEKDVITWNSMISGYAQNGSAYDALRLFNQMRS-YSLAPD 1494
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRL-NQDVGVGNALVNMYAKCGLISCSYKLF 361
T S L+A A L ++Q G +HA+ ++ L + ++ +G AL+N YAKCG + +F
Sbjct: 1495 AITLVSTLSASATLGAIQVGSSLHAYSVKGGLFSSNLYIGTALLNFYAKCGDARSARMVF 1554
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ M +N+++W+ +I + G +L +F M +KP+ V F +L+AC+++G+V+
Sbjct: 1555 DSMGVKNIITWSAMIGGYGVQGDGSGSLSIFSNMLKEDLKPNEVIFTTVLSACSYSGMVE 1614
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
EG YF SM + Y P ++H+ C++DLL R+GKL EA ++ KK P+ +D + G L
Sbjct: 1615 EGGRYFKSMIQDYNFVPSMKHYACMVDLLARSGKLDEALDFIKKMPVQRDVSLYGAFLHG 1674
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
C L +GE + +++ L YVL+SNLYASDG WG V R ++ GL K P
Sbjct: 1675 CGLYSRFDLGEVVVREMLQLHRNEACYYVLVSNLYASDGKWGQVNEVRDLMLQRGLNKVP 1734
Query: 542 SYSMIEVQG 550
YS++E
Sbjct: 1735 GYSLVETNA 1743
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 197/407 (48%), Gaps = 30/407 (7%)
Query: 22 ISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQA 81
I H ++ G+ +++ ++ +Y G + AR VFD+M + +W MI +
Sbjct: 1137 IKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKVMIRWYFLN 1196
Query: 82 GEHLLALEFFSQMHLLPNE---YIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVG 138
+ + F+++M + E IF+ + AC+ ++ +V+G+++H +K G SFV
Sbjct: 1197 DLFVDVIPFYNRMRMSFRECDNIIFSIILKACSELREIVEGRKVHCQIVKVG-GPDSFVM 1255
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL 198
LI MY K G + V+ E + N+VS+ ++IAG+V+N E+G +F M +
Sbjct: 1256 TGLIDMYGKCGQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNRMRDALVE 1315
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKA 258
+ F+ + + L +G +H +K E + F+ T + +Y K +A
Sbjct: 1316 SNPFTLGSIINAFTKLRALHQGKWVHGYAIKNIAELSSFLATTFLDMYVKCGQTRDARMI 1375
Query: 259 FRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
+ + DL+SW I + GL +F + +R D +++L
Sbjct: 1376 YDELPTIDLVSWTVMIVGYTQARQPNDGLRLFAD-----EIRSDLLPNSALL-------- 1422
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA 378
Q+ +R NAL++MYAKC IS +Y +F+ +L ++V++WN++I+
Sbjct: 1423 -----QVFFQRVRFL--------NALIDMYAKCHTISDAYAIFHGVLEKDVITWNSMISG 1469
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
+A + AL+LF QM++ + PD++T + L+A G ++ G +
Sbjct: 1470 YAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAIQVGSS 1516
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 156/332 (46%), Gaps = 30/332 (9%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+++ +K +AL QG +H +K + ++ L++Y KCG+ AR ++DE+
Sbjct: 1320 TLGSIINAFTKLRALHQGKWVHGYAIKNIAELSSFLATTFLDMYVKCGQTRDARMIYDEL 1379
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFS---QMHLLPNEYIFASAISACAGIQSLVKGQ 120
+LVSW+ MI G+ QA + L F+ + LLPN +
Sbjct: 1380 PTIDLVSWTVMIVGYTQARQPNDGLRLFADEIRSDLLPNSAL------------------ 1421
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
L+ + + F+ N+LI MY K SDA ++ E +++++N++I+G+ +N
Sbjct: 1422 ------LQVFFQRVRFL-NALIDMYAKCHTISDAYAIFHGVLEKDVITWNSMISGYAQNG 1474
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL-ESNPFVG 239
+F M L PD + L + ++ G LH +VK L SN ++G
Sbjct: 1475 SAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAIQVGSSLHAYSVKGGLFSSNLYIG 1534
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ Y+K A F + K++I+W+ I D LS+F M + +
Sbjct: 1535 TALLNFYAKCGDARSARMVFDSMGVKNIITWSAMIGGYGVQGDGSGSLSIFSNMLKE-DL 1593
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
+P++ F ++L+AC+ V+ G + +I+
Sbjct: 1594 KPNEVIFTTVLSACSYSGMVEEGGRYFKSMIQ 1625
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGI-QPDVIVSNHVLNLYAKCGKMILARKVF 60
A ++ S L + A+Q G SLHA +K G+ ++ + +LN YAKCG AR VF
Sbjct: 1495 AITLVSTLSASATLGAIQVGSSLHAYSVKGGLFSSNLYIGTALLNFYAKCGDARSARMVF 1554
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
D M +N+++WSAMI G+ G+ +L FS M L PNE IF + +SAC+
Sbjct: 1555 DSMGVKNIITWSAMIGGYGVQGDGSGSLSIFSNMLKEDLKPNEVIFTTVLSACS 1608
>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 651
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 192/574 (33%), Positives = 307/574 (53%), Gaps = 6/574 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L C+K L+ +HA VLK Q ++ V +++Y KCG++ A VF EM R+
Sbjct: 59 VLKACAKLSHLRNSQIIHAHVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRD 118
Query: 68 LVSWSAMISGHHQAG--EHLLALEFFSQMH-LLPNEYIFASAISACAGIQSLVKGQQIHA 124
+ SW+AM+ G Q+G + L L ++ + P+ I + ++SL +++
Sbjct: 119 IASWNAMLLGFAQSGFLDRLSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYS 178
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE--PNLVSFNALIAGFVENQQP 182
+ ++ G V N+LI+ Y K G A ++ E ++VS+N++IA + ++
Sbjct: 179 FGIRIGVHMDVSVANTLIAAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKH 238
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
K +K ML G PD + L C L G+++H VK +S+ V NT+
Sbjct: 239 VKAVNCYKGMLDGGFSPDISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTL 298
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +YSK + A F + +K +SW I+A + + +++F M G +PD
Sbjct: 299 ICMYSKCGDVHSARFLFNGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAME-AAGEKPD 357
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
T ++++ C +++ GK I + I L +V V NAL++MYAKCG + + +LF
Sbjct: 358 LVTVLALISGCGQTGALELGKWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFY 417
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
M +R VVSW T+I A A + AL+LF M G+KP+ +TF+ +L AC H GLV+
Sbjct: 418 TMANRTVVSWTTMITACALNGDVKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLVER 477
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G FN M + YGI+P I+H++C++DLLGR G L EA E K P D + LLSAC
Sbjct: 478 GLECFNMMTQKYGINPGIDHYSCMVDLLGRKGHLREALEIIKSMPFEPDSGIWSALLSAC 537
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
+L + +G+ +++QLF L+P PYV ++N+YAS MW VA R+ +K ++K P
Sbjct: 538 KLHGKMEMGKYVSEQLFELEPQVAVPYVEMANIYASAEMWEGVAAIRRNMKYLQVRKSPG 597
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
S+I+V G FTV + H + I ML L+
Sbjct: 598 QSIIQVNGKPTIFTVEDRDHPETLYIYDMLDGLT 631
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 212/428 (49%), Gaps = 12/428 (2%)
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
L +W++ G AL F QM + PN F + ACA + L Q IHA
Sbjct: 18 LFTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHA 77
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ LK + S FV + + MY+K G DA V+ E ++ S+NA++ GF ++ ++
Sbjct: 78 HVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDR 137
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
+ + M G+ PD + ++ L ++ ++ + + V NT++A
Sbjct: 138 LSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIA 197
Query: 245 LYSKFNLIGEAEKAFRLIEE--KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
YSK + AE F I + ++SWN+ IAA ++ + K ++ +K M D G PD
Sbjct: 198 AYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGML-DGGFSPD 256
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
T ++L++C ++ HG +H+H +++ + DV V N L+ MY+KCG + + LFN
Sbjct: 257 ISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFN 316
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
M + VSW +I+A+A A+ LF M+A G KPD VT + L++ C G ++
Sbjct: 317 GMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALEL 376
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE--YTKKFPLGQDPIVLGTLLS 480
G+ + ++ G+ ++ LID+ + G +A+E YT + + T+++
Sbjct: 377 GK-WIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMA---NRTVVSWTTMIT 432
Query: 481 ACRLRRDV 488
AC L DV
Sbjct: 433 ACALNGDV 440
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 141/298 (47%), Gaps = 11/298 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I +LL C + KAL G+ +H+ +K+G DV V N ++ +Y+KCG + AR +F+ M
Sbjct: 259 TILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFNGM 318
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
S++ VSW+ MIS + + G A+ F+ M P+ + IS C +L G+
Sbjct: 319 SDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELGK 378
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
I YS+ G V N+LI MY K G +DA ++ +VS+ +I N
Sbjct: 379 WIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMITACALNG 438
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC-KLESNPFVG 239
+ E+F +ML G+ P+ +F L+ C+ + +G L C + K NP +
Sbjct: 439 DVKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLVERG--LECFNMMTQKYGINPGI- 495
Query: 240 NTIMALYSKFNLIGEAEKAFRLIE----EKDLISWNTFIAACSHCADYEKGLSVFKEM 293
+ + G +A +I+ E D W+ ++AC E G V +++
Sbjct: 496 DHYSCMVDLLGRKGHLREALEIIKSMPFEPDSGIWSALLSACKLHGKMEMGKYVSEQL 553
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 201/611 (32%), Positives = 317/611 (51%), Gaps = 45/611 (7%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYA--KCGKMILARKVFDEMS 64
+LL C +Q +H+ ++K G+ V V + +++ A G + A +F+E
Sbjct: 33 NLLEKCKNINTFKQ---IHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQ 89
Query: 65 ER---NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
+ N+ W+++I G+ + L +L FS+M + PN + F +C ++ +
Sbjct: 90 QHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHE 149
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVG--------------------------YSS 152
G+Q+HA++LK V S+I MY VG Y S
Sbjct: 150 GKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVS 209
Query: 153 -----DALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGG 207
DA ++ E ++VS+NA+I+G+V++ + E+ F M +LP++ +
Sbjct: 210 QGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVV 269
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDL 267
L C + G + SN + N ++ +Y K A + F IEEKD+
Sbjct: 270 LSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDV 329
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHA 327
ISWNT I S+ + YE+ L++F+ M + V+P+D TF IL ACA L ++ GK +HA
Sbjct: 330 ISWNTMIGGYSYLSLYEEALALFEVMLRSN-VKPNDVTFLGILHACACLGALDLGKWVHA 388
Query: 328 HLIR-MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGG 386
++ + +R + + + +L++MYAKCG I + ++F M RN+ SWN +++ A H
Sbjct: 389 YIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAE 448
Query: 387 SALKLFEQMKATGI-KPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
AL LF +M G+ +PD +TF+G+L+AC AGLV G YF SM + YGISP ++H+ C
Sbjct: 449 RALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGC 508
Query: 446 LIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTT 505
+IDLL RA K EAE K + D + G+LLSAC+ V GE +A++LF L+P
Sbjct: 509 MIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPEN 568
Query: 506 TSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKI 565
+VLLSN+YA G W DVA R L D G+KK P + IE+ G +F V + H +
Sbjct: 569 AGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPEC 628
Query: 566 GEINYMLKTLS 576
I ML +
Sbjct: 629 NNIYKMLNEVD 639
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 161/473 (34%), Positives = 279/473 (58%), Gaps = 2/473 (0%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+ +AI+AC ++L +G+Q+HA + Y F+G L++MY++ G DA V
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
E ++VS+ +I+G+ + ++ + ++F MLR G +P+ ++ A L CS + +G
Sbjct: 73 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
+H L VK ES+ FVG++++ +Y+K I EA + F + E+D++S I+ +
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 192
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
E+ L +F+++ ++ G++ + TF +++ A +GLAS+ +GKQ+HA ++R L V + N
Sbjct: 193 DEEALDLFRQLYSE-GMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQN 251
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
+L++MY+KCG + S ++F+ ML R+VVSWN ++ + H LG + LF+ + +KP
Sbjct: 252 SLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKP 310
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
DSVT + +L+ C+H GLV EG F+++ K H+ C+IDLLGR+G+L +A
Sbjct: 311 DSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNL 370
Query: 463 TKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMW 522
+ P P + G+LL ACR+ +V +GE +A++L ++P YV+LSN+YA+ GMW
Sbjct: 371 IENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMW 430
Query: 523 GDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
DV RK++ + + KEP S I + F +E H +IN +K +
Sbjct: 431 KDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEI 483
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 204/391 (52%), Gaps = 11/391 (2%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C + +AL +G +HA ++ +P V + ++ +Y +CG + AR V D M ER++VSW
Sbjct: 20 CIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSW 79
Query: 72 SAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
+ MISG+ Q H+ AL+ F +M +PNEY A+ +++C+G QS+ +G+Q+H+ +K
Sbjct: 80 TTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVK 139
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
+ S FVG+SL+ MY K +A V+ E ++VS A+I+G+ + E+ ++
Sbjct: 140 TNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDL 199
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
F+ + +G+ + +F + S L G +H L ++ +L + N+++ +YSK
Sbjct: 200 FRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSK 259
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
+ + + F + E+ ++SWN + + +S+FK++ + V+PD T +
Sbjct: 260 CGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE--VKPDSVTLLA 317
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLN-QDVGVGNALVNMYAKCGLISCSYKLFNEMLHR 367
+L+ C+ V G I +++ + G ++++ + G + + L M
Sbjct: 318 VLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFE 377
Query: 368 NVVS-WNTIIAA---HANHRLGG-SALKLFE 393
+ S W +++ A HAN +G A KL E
Sbjct: 378 STPSIWGSLLGACRVHANVHVGELVAQKLLE 408
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 193/422 (45%), Gaps = 61/422 (14%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++++L CS +++ QG +H+ ++K + + V + +L++YAK + AR+VFD +
Sbjct: 113 TLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTL 172
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
ER++VS +A+ISG+ Q G AL+ F Q++ + N F + ++A +G+ SL G+
Sbjct: 173 PERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGK 232
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HA L+ + NSLI MY K G + V+ E ++VS+NA++ G+ +
Sbjct: 233 QVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHG 292
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK---LESNPF 237
+ +FK L + + PD + L CS + +G+ + VK + L + +
Sbjct: 293 LGHEVISLFK-DLHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHY 351
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
I+ L + G EKA LIE +E S+
Sbjct: 352 --GCIIDLLGRS---GRLEKALNLIEN----------------MPFESTPSI-------- 382
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
+ S+L AC A+V G+ + L+ M ++ G L N+YA G+
Sbjct: 383 --------WGSLLGACRVHANVHVGELVAQKLLEME-PENAGNYVILSNIYAAAGMWKDV 433
Query: 358 YKLFNEMLHRNVV-----SW----NTIIAAHANHR-------LGGSALKLFEQMKATGIK 401
+K+ ML + V SW I H++ R + ++F +KA G
Sbjct: 434 FKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFV 493
Query: 402 PD 403
PD
Sbjct: 494 PD 495
>gi|242076494|ref|XP_002448183.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
gi|241939366|gb|EES12511.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
Length = 549
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 175/530 (33%), Positives = 286/530 (53%), Gaps = 31/530 (5%)
Query: 63 MSERNLVSWSAMISGHHQ------AGEHLLALEFFSQMHLL--PNEYIFAS---AISACA 111
+SE W +S HQ G A+ F +M P + AS A+ +CA
Sbjct: 3 VSEAVYTPWPPPLSWAHQIRMAAAQGHFRDAISLFLRMRACAAPRSSVPASLPAALKSCA 62
Query: 112 GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKV--------------GYSSDALL- 156
+ G +HA +++ G + F N+L+++Y K+ G S L
Sbjct: 63 ALGLSALGASLHALAIRSGAFADRFTANALLNLYCKLPCSYLHSTGVTSVGGTGSSTALE 122
Query: 157 ----VYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
V+ E E ++VS+N L+ G E + + + + M R+G PD F+ + L I +
Sbjct: 123 SVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPIFA 182
Query: 213 VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNT 272
D+++G +H V+ +++ FVG++++ +Y+ + K F + +D I WN+
Sbjct: 183 ECADVKRGSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPILWNS 242
Query: 273 FIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
+A C+ E+ L +F+ M GVRP TF+S++ C LAS++ GKQ+HA++IR
Sbjct: 243 VLAGCAQNGSVEEALGIFRRMLQT-GVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIRG 301
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
+V + ++L++MY KCG IS ++ +F+ M +VVSW +I +A H AL LF
Sbjct: 302 GFEDNVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAREALVLF 361
Query: 393 EQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
E+M+ KP+ +TF+ +LTAC+HAGLV +G YF SM YGI P +EH L D+LGR
Sbjct: 362 ERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAALADILGR 421
Query: 453 AGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLL 512
AG+L EA + K + V TLL ACR+ ++ ++ E +AK++ L+P + +V+L
Sbjct: 422 AGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVL 481
Query: 513 SNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
SN+Y++ G W + A RK ++ G+KK+P+ S IEV+ F + SH
Sbjct: 482 SNMYSASGRWNEAAHLRKSMRKKGMKKDPACSWIEVKNKLHVFVAHDRSH 531
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 193/427 (45%), Gaps = 34/427 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMIL-------- 55
S+ + L C+ G SLHA ++ G D +N +LNLY K L
Sbjct: 53 SLPAALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKLPCSYLHSTGVTSV 112
Query: 56 -----------ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEY 101
RKVFDEM ER++VSW+ ++ G + G H AL +M P+ +
Sbjct: 113 GGTGSSTALESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSF 172
Query: 102 IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEA 161
+S + A + +G ++H ++++ G+ + FVG+SLI MY + ++ V+
Sbjct: 173 TLSSVLPIFAECADVKRGSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNL 232
Query: 162 FEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM 221
+ + +N+++AG +N E+ +F+ ML+ G+ P +F+ + +C LR G
Sbjct: 233 PVRDPILWNSVLAGCAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGK 292
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
LH ++ E N F+ ++++ +Y K I A F + D++SW I +
Sbjct: 293 QLHAYVIRGGFEDNVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHG 352
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG----KQIHAHLIRMRLNQD 337
+ L +F+ M + +P+ TF ++L AC+ V G K + H + +
Sbjct: 353 PAREALVLFERMELGNA-KPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEH 411
Query: 338 VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS-WNTIIAA---HANHRLGGSALKLFE 393
AL ++ + G + +Y ++M + S W+T++ A H N L K
Sbjct: 412 CA---ALADILGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIM 468
Query: 394 QMKATGI 400
+++ I
Sbjct: 469 ELEPRSI 475
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 186/569 (32%), Positives = 296/569 (52%), Gaps = 13/569 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S L C ++ G +HA +LK DV VSN ++ +YA CG+M A +VF M +
Sbjct: 256 SALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFK 315
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIH 123
+ VSW+ ++SG Q + A+ F M P++ + I+A +L+ G ++H
Sbjct: 316 DCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVH 375
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE----PNLVSFNALIAGFVEN 179
AY++K G S +GNSLI MY K + G AFE +L+S+ +IAG+ +N
Sbjct: 376 AYAIKHGIDSNMHIGNSLIDMYGKCC----CVKYMGSAFEYMPEKDLISWTTIIAGYAQN 431
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ + + + + + D L CS + +H +K L ++ +
Sbjct: 432 ECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL-ADILIQ 490
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N I+ +Y + L+ A F I KD++SW + I C H + L +F + + +
Sbjct: 491 NAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLI-ETNI 549
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
PD T S+L A A L+S++ GK+IH LIR + + N+LV+MYA+CG + +
Sbjct: 550 EPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARN 609
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+FN + R+++ W ++I A+ H G A+ LF +M + PD +TF+ LL AC+H+GL
Sbjct: 610 IFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGL 669
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V EG+ +F M+ Y + P EH+ CL+DLL R+ L EA + + P+ V LL
Sbjct: 670 VVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALL 729
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
ACR+ + +GE AK+L L + YVL+SN +A+DG W DV R ++K + LKK
Sbjct: 730 GACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKK 789
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
+P S IEV+ F + SH + I
Sbjct: 790 KPGCSWIEVENKIHTFMARDKSHPQCNNI 818
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 228/435 (52%), Gaps = 10/435 (2%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPD-VIVSNHVLNLYAKCGKMILARKV 59
+ ++ S L C+ KAL QG LHA LK D V + +++Y KCG A KV
Sbjct: 45 LQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKV 104
Query: 60 FDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSL 116
FD+MSER + +W+AMI AG ++ A+E + +M +L + + F + AC +
Sbjct: 105 FDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKER 164
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF--EPNLVSFNALIA 174
G +IH ++K GY FV N+LI+MY K G A +++ + + VS+N++I+
Sbjct: 165 RLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIIS 224
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
V + + +F+ M G+ + ++F L+ C ++ G +H + +K +
Sbjct: 225 AHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFT 284
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
+ +V N ++A+Y+ + +AE+ F+ + KD +SWNT ++ Y ++ F++M
Sbjct: 285 DVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDM- 343
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
D G +PD + +++AA A++ G ++HA+ I+ ++ ++ +GN+L++MY KC +
Sbjct: 344 QDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCV 403
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
F M ++++SW TIIA +A + AL L +++ + D + +L AC
Sbjct: 404 KYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLAC 463
Query: 415 N---HAGLVKEGEAY 426
+ L+KE Y
Sbjct: 464 SGLKSEKLIKEIHGY 478
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 148/489 (30%), Positives = 249/489 (50%), Gaps = 17/489 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +L C K + G +H +K G V V N ++ +YAKCG + AR +FD
Sbjct: 148 AFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFD 207
Query: 62 E--MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSL 116
M + + VSW+++IS H GE L AL F +M + N Y F SA+ AC G +
Sbjct: 208 SGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFI 267
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G+ IHA LK + + +V N+LI+MY G DA V+ + VS+N L++G
Sbjct: 268 KIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGM 327
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
V+N F+ M G PD+ S + S +L GM +H +K ++SN
Sbjct: 328 VQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNM 387
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
+GN+++ +Y K + AF + EKDLISW T IA + + L++ +++ +
Sbjct: 388 HIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLE 447
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
+ D SIL AC+GL S + K+IH ++++ L D+ + NA+VN+Y + L+
Sbjct: 448 K-MDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL-ADILIQNAIVNVYGELALVDY 505
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ +F + +++VSW ++I ++ L AL+LF + T I+PD +T + +L A
Sbjct: 506 ARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAA 565
Query: 417 AGLVKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE---EYTKKFPLGQDP 472
+K+G E + + K + + I + L+D+ R G + A Y K+ +D
Sbjct: 566 LSSLKKGKEIHGFLIRKGFFLEGLIAN--SLVDMYARCGTMENARNIFNYVKQ----RDL 619
Query: 473 IVLGTLLSA 481
I+ ++++A
Sbjct: 620 ILWTSMINA 628
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 195/362 (53%), Gaps = 11/362 (3%)
Query: 97 LPNEYIFASAISACAGIQSLVKGQQIHAYSLKF-GYASISFVGNSLISMYMKVGYSSDAL 155
P + ++ A+ CA ++L +GQQ+HA+ LK Y F+ + MY K G DA+
Sbjct: 43 FPLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAV 102
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN 215
V+ + E + ++NA+I V + + E++K M G+ D F+F L+ C
Sbjct: 103 KVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFK 162
Query: 216 DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR--LIEEKDLISWNTF 273
+ R G +H + VKC FV N ++A+Y+K +G A F L+E+ D +SWN+
Sbjct: 163 ERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSI 222
Query: 274 IAACSHCADYE--KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
I+A H + E + LS+F+ M + GV + +TF S L AC G ++ G+ IHA +++
Sbjct: 223 ISA--HVGEGESLEALSLFRRM-QEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILK 279
Query: 332 MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
DV V NAL+ MYA CG + + ++F ML ++ VSWNT+++ + + A+
Sbjct: 280 SNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINH 339
Query: 392 FEQMKATGIKPDSVTFIGLLTACNH-AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLL 450
F+ M+ +G KPD V+ + ++ A A L+ E + +++ +GI ++ LID+
Sbjct: 340 FQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIK--HGIDSNMHIGNSLIDMY 397
Query: 451 GR 452
G+
Sbjct: 398 GK 399
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 196/403 (48%), Gaps = 12/403 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+ +++ ++ L G+ +HA +K GI ++ + N ++++Y KC + F+ M
Sbjct: 354 SVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYM 413
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQ 120
E++L+SW+ +I+G+ Q HL AL ++ L + + S + AC+G++S +
Sbjct: 414 PEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIK 473
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+IH Y LK G A I + N+++++Y ++ A V+ ++VS+ ++I V N
Sbjct: 474 EIHGYVLKGGLADI-LIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNG 532
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ E+F ++ + PD + L + + L+KG +H ++ + N
Sbjct: 533 LAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIAN 592
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +Y++ + A F ++++DLI W + I A + + +F +M+ D V
Sbjct: 593 SLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMT-DENVL 651
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN--ALVNMYAKCGLISCSY 358
PD TF ++L AC+ V GKQ H +++ + + LV++ A+ + +Y
Sbjct: 652 PDHITFLALLYACSHSGLVVEGKQ-HFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAY 710
Query: 359 KLFNEM-LHRNVVSWNTIIAA---HANHRLGGSALKLFEQMKA 397
M + + W ++ A H+N+ LG A K Q+
Sbjct: 711 HFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNT 753
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 161/473 (34%), Positives = 279/473 (58%), Gaps = 2/473 (0%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+ +AI+AC ++L +G+Q+HA + Y F+G L++MY++ G DA V
Sbjct: 45 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 104
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
E ++VS+ +I+G+ + ++ + ++F MLR G +P+ ++ A L CS + +G
Sbjct: 105 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 164
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
+H L VK ES+ FVG++++ +Y+K I EA + F + E+D++S I+ +
Sbjct: 165 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 224
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
E+ L +F+++ ++ G++ + TF +++ A +GLAS+ +GKQ+HA ++R L V + N
Sbjct: 225 DEEALDLFRQLYSE-GMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQN 283
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
+L++MY+KCG + S ++F+ ML R+VVSWN ++ + H LG + LF+ + +KP
Sbjct: 284 SLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKP 342
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
DSVT + +L+ C+H GLV EG F+++ K H+ C+IDLLGR+G+L +A
Sbjct: 343 DSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNL 402
Query: 463 TKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMW 522
+ P P + G+LL ACR+ +V +GE +A++L ++P YV+LSN+YA+ GMW
Sbjct: 403 IENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMW 462
Query: 523 GDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
DV RK++ + + KEP S I + F +E H +IN +K +
Sbjct: 463 KDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEI 515
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 204/391 (52%), Gaps = 11/391 (2%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C + +AL +G +HA ++ +P V + ++ +Y +CG + AR V D M ER++VSW
Sbjct: 52 CIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSW 111
Query: 72 SAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
+ MISG+ Q H+ AL+ F +M +PNEY A+ +++C+G QS+ +G+Q+H+ +K
Sbjct: 112 TTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVK 171
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
+ S FVG+SL+ MY K +A V+ E ++VS A+I+G+ + E+ ++
Sbjct: 172 TNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDL 231
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
F+ + +G+ + +F + S L G +H L ++ +L + N+++ +YSK
Sbjct: 232 FRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSK 291
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
+ + + F + E+ ++SWN + + +S+FK++ + V+PD T +
Sbjct: 292 CGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE--VKPDSVTLLA 349
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLN-QDVGVGNALVNMYAKCGLISCSYKLFNEMLHR 367
+L+ C+ V G I +++ + G ++++ + G + + L M
Sbjct: 350 VLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFE 409
Query: 368 NVVS-WNTIIAA---HANHRLGG-SALKLFE 393
+ S W +++ A HAN +G A KL E
Sbjct: 410 STPSIWGSLLGACRVHANVHVGELVAQKLLE 440
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 193/422 (45%), Gaps = 61/422 (14%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++++L CS +++ QG +H+ ++K + + V + +L++YAK + AR+VFD +
Sbjct: 145 TLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTL 204
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
ER++VS +A+ISG+ Q G AL+ F Q++ + N F + ++A +G+ SL G+
Sbjct: 205 PERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGK 264
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+HA L+ + NSLI MY K G + V+ E ++VS+NA++ G+ +
Sbjct: 265 QVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHG 324
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK---LESNPF 237
+ +FK L + + PD + L CS + +G+ + VK + L + +
Sbjct: 325 LGHEVISLFK-DLHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHY 383
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
I+ L + G EKA LIE +E S+
Sbjct: 384 --GCIIDLLGRS---GRLEKALNLIEN----------------MPFESTPSI-------- 414
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
+ S+L AC A+V G+ + L+ M ++ G L N+YA G+
Sbjct: 415 --------WGSLLGACRVHANVHVGELVAQKLLEME-PENAGNYVILSNIYAAAGMWKDV 465
Query: 358 YKLFNEMLHRNVV-----SW----NTIIAAHANHR-------LGGSALKLFEQMKATGIK 401
+K+ ML + V SW I H++ R + ++F +KA G
Sbjct: 466 FKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFV 525
Query: 402 PD 403
PD
Sbjct: 526 PD 527
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 164/470 (34%), Positives = 265/470 (56%), Gaps = 4/470 (0%)
Query: 107 ISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNL 166
+ AC L+ G++IH LK G+ FV SL+ MY + G DA ++ + +
Sbjct: 4 VKACG---DLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDR 60
Query: 167 VSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCL 226
S+NA+I+G+ +N + ++ M +G+ D + A L +C+ D+ G ++H
Sbjct: 61 GSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLY 120
Query: 227 TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKG 286
+K LE FV N ++ +Y+KF +G A+K F L+ KD++SWNT I + +
Sbjct: 121 VIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLI-KDVVSWNTLITGYAQNGLASEA 179
Query: 287 LSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVN 346
+ V+ M + P+ T+ SIL A + + ++Q G +IH +I+ L DV VG L++
Sbjct: 180 IEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLID 239
Query: 347 MYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVT 406
MY KCG + + LF ++ +N V WN +I+ + H G AL+LF +MKA +KPD +T
Sbjct: 240 MYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHIT 299
Query: 407 FIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
F+ LL+AC+H+GLV + + FN ME+ YGI P ++H+ C++DL GRAG+L A + KK
Sbjct: 300 FVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKM 359
Query: 467 PLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVA 526
P+ D G LL+ACR+ ++ +G+ +++LF + YVLLSN+YA+ G W V
Sbjct: 360 PIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVD 419
Query: 527 GARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
R + +D GL+K P +S I + + F +H K EI L+ L+
Sbjct: 420 DVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLT 469
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 204/393 (51%), Gaps = 26/393 (6%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L G +H VLK+G + DV V+ ++++Y++ G + ARK+FD+M R+ SW+AMISG
Sbjct: 10 LLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISG 69
Query: 78 HHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
+ Q G AL+ +M L + AS + CA + ++ G+ IH Y +K G
Sbjct: 70 YCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFE 129
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
FV N+LI+MY K G A V+G + ++VS+N LI G+ +N + EV+ LM
Sbjct: 130 LFVSNALINMYAKFGSLGHAQKVFGLLIK-DVVSWNTLITGYAQNGLASEAIEVYLLMEE 188
Query: 195 -QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
+ ++P++ ++ L S L++GM +H +K L S+ FVG ++ +Y K +
Sbjct: 189 HEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLD 248
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
+A F + K+ + WN I+ D EK L +F+EM + V+PD TF S+L+AC
Sbjct: 249 DAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAER-VKPDHITFVSLLSAC 307
Query: 314 --AGLASVQHGKQIHAHLIRMRLNQDVGVGNAL------VNMYAKCGLISCSYKLFNEM- 364
+GL S A + ++ G+ +L V+++ + G + ++ +M
Sbjct: 308 SHSGLVS-------DAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMP 360
Query: 365 LHRNVVSWNTIIAA---HANHRLGGSAL-KLFE 393
+ + +W ++ A H N LG A +LFE
Sbjct: 361 IQPDASAWGALLNACRIHGNIELGKHASERLFE 393
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 170/360 (47%), Gaps = 50/360 (13%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A +++S+L C++ + G +H V+K G++ ++ VSN ++N+YAK G + A+KVF
Sbjct: 95 AITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFG 154
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLV 117
+ +++VSW+ +I+G+ Q G A+E + M ++PN+ + S + A + + +L
Sbjct: 155 LLI-KDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQ 213
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+G +IH +K S FVG LI MY K G DA+ ++ + N V +NA+I+ +
Sbjct: 214 QGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYG 273
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ EK E+F+ M + + PD +F L CS S
Sbjct: 274 VHGDGEKALELFREMKAERVKPDHITFVSLLSACSHS----------------------- 310
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEK-----DLISWNTFIAACSHCADYEKGLSVFKE 292
L+ +A+ F ++EE+ L + + + E + K+
Sbjct: 311 ------------GLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKK 358
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
M ++PD + ++L AC +++ GK L + +++VG L N+YA G
Sbjct: 359 MP----IQPDASAWGALLNACRIHGNIELGKHASERLFEVD-SENVGYYVLLSNIYANVG 413
>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 970
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 195/570 (34%), Positives = 311/570 (54%), Gaps = 37/570 (6%)
Query: 17 ALQQGISLHAAVLKMGIQPDVI-VSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMI 75
L++G +H V+ G+ ++ + N ++N+YAKCG + AR+VF M+E++ VSW++MI
Sbjct: 328 GLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKDSVSWNSMI 387
Query: 76 SGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYA 132
+G Q + A+E + M +LP + S+IS+CA ++ GQQIH SLK G
Sbjct: 388 TGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGESLKLGID 447
Query: 133 SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ--PEKGFEVFK 190
V N+L+++Y + G ++ ++ E + VS+N++I +++ PE F
Sbjct: 448 LNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPE-AVACFL 506
Query: 191 LMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN 250
LR G +R +F+ L S + G +H L +K + N ++A Y K
Sbjct: 507 NALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCG 566
Query: 251 LIGEAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
+ EK F R+ E +D ++WN+ I+ H K L + M G R D F +A++
Sbjct: 567 EMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMMQT-GQRLDSFMYATV 625
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
L+A A +A+++ G ++HA +R L DV VG+ALV+MY+KCG + + + FN M
Sbjct: 626 LSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTM----- 680
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATG-IKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
LF MK G PD VTF+G+L+AC+HAGL++EG +F
Sbjct: 681 --------------------PLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFE 720
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA-CRLR-R 486
SM +YG++P IEHF+C+ DLLGRAG+L + E++ +K P+ + ++ T+L A CR R
Sbjct: 721 SMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGR 780
Query: 487 DVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMI 546
+G++ A+ LF L+P YVLL N+YA+ G W D+ ARK +KD+ +KKE YS +
Sbjct: 781 KAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 840
Query: 547 EVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
++ F + SH I LK L+
Sbjct: 841 TMKDGVHMFVAGDKSHPDADVIYKKLKELN 870
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 141/473 (29%), Positives = 236/473 (49%), Gaps = 20/473 (4%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
H+ + K G++ DV + N+++N Y + G + ARKVFDEM RN VSW+ ++SG+ + GE
Sbjct: 23 FHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSRNGE 82
Query: 84 HLLALEFFSQM---HLLPNEYIFASAISACAGIQS--LVKGQQIHAYSLKFGYASISFVG 138
H AL F M + N Y F SA+ AC + S ++ G+QIH K YA + V
Sbjct: 83 HKEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDAVVS 142
Query: 139 NSLISMYMKVGYS-SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
N LISMY K G S AL + + N VS+N++I+ + + F++F M G
Sbjct: 143 NVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDGS 202
Query: 198 LPDRFSFAGGLEI-CSVSN-DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
P ++F + CS++ D+R + C K ++ FVG+ +++ ++K + A
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHA 262
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF-----TFASI- 309
K F +E ++ ++ N + E+ +F +M++ V P+ + +F
Sbjct: 263 RKIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYS 322
Query: 310 LAACAGLASVQHGKQIHAHLIRMRL-NQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
LA GL + G+++H H+I L + VG+GN LVNMYAKCG I+ + ++F M ++
Sbjct: 323 LAEEVGL---KKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKD 379
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
VSWN++I + A++ ++ M+ I P S T I +++C K G+
Sbjct: 380 SVSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQIHG 439
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
K GI ++ L+ L G L E + P D + +++ A
Sbjct: 440 ESLK-LGIDLNVSVSNALMTLYAETGCLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 235/473 (49%), Gaps = 14/473 (2%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMI-LARKVFDEMSERNLVSWSAMISGHH 79
G +H + K+ D +VSN ++++Y KCG + A + FD++ +N VSW+++IS +
Sbjct: 123 GRQIHGLLFKLSYAVDAVVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYS 182
Query: 80 QAGEHLLALEFFSQMHL---LPNEYIFASAI-SACAGIQSLVK-GQQIHAYSLKFGYASI 134
Q G+ A + F M P EY F S + +AC+ + V+ +QI K G+ +
Sbjct: 183 QTGDQRFAFKMFYSMQCDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTD 242
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
FVG+ L+S + K G A ++ + N V+ N L+ G V + E+ ++F M
Sbjct: 243 LFVGSGLVSAFAKSGSLIHARKIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNS 302
Query: 195 Q-GLLPDRFS-FAGGLEICSVSND--LRKGMILHCLTVKCKL-ESNPFVGNTIMALYSKF 249
+ P+ + S++ + L+KG +H + L + +GN ++ +Y+K
Sbjct: 303 MIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKC 362
Query: 250 NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
I +A + F + EKD +SWN+ I + + + + ++ M H + P FT S
Sbjct: 363 GSIADARRVFCFMTEKDSVSWNSMITGLDQNSCFIEAVERYQSMRR-HEILPGSFTLISS 421
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
+++CA L + G+QIH +++ ++ +V V NAL+ +YA+ G ++ K+F+ M +
Sbjct: 422 ISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQ 481
Query: 370 VSWNTIIAAHA-NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
VSWN+II A A + R A+ F G K + +TF +L+A + + G+ +
Sbjct: 482 VSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQ-IH 540
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+ Y I+ + LI G+ G++ E+ + +D + +++S
Sbjct: 541 GLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISG 593
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 157/315 (49%), Gaps = 18/315 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S + C+ K + G +H LK+GI +V VSN ++ LYA+ G + RK+F M
Sbjct: 417 TLISSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSM 476
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP-----NEYIFASAISACAGIQSLVK 118
E + VSW+++I G + E L ++ L N F+S +SA + +
Sbjct: 477 PEHDQVSWNSII-GALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGEL 535
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE-PNLVSFNALIAGFV 177
G+QIH +LK+ A + N+LI+ Y K G ++ E + V++N++I+G++
Sbjct: 536 GKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYI 595
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
N+ K ++ M++ G D F +A L + L +GM +H +V+ LES+
Sbjct: 596 HNELLAKALDLVWFMMQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVV 655
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLI-----------EEKDLISWNTFIAACSHCADYEKG 286
VG+ ++ +YSK + A + F + D +++ ++ACSH E+G
Sbjct: 656 VGSALVDMYSKCGRLDYALRFFNTMPLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEG 715
Query: 287 LSVFKEMSNDHGVRP 301
F+ MS+ +G+ P
Sbjct: 716 FKHFESMSDSYGLAP 730
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 122/245 (49%), Gaps = 7/245 (2%)
Query: 222 ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA 281
+ H K LE + ++ N ++ Y + A K F + ++ +SW ++ S
Sbjct: 22 LFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSRNG 81
Query: 282 DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ--HGKQIHAHLIRMRLNQDVG 339
++++ L ++M + GV + + F S L AC L SV G+QIH L ++ D
Sbjct: 82 EHKEALVFLRDMVKE-GVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDAV 140
Query: 340 VGNALVNMYAKC-GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
V N L++MY KC G + + + F+++ +N VSWN+II+ ++ A K+F M+
Sbjct: 141 VSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCD 200
Query: 399 GIKPDSVTFIGLL-TACN-HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
G +P TF L+ TAC+ V+ E +++K+ G D+ + L+ ++G L
Sbjct: 201 GSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKS-GFLTDLFVGSGLVSAFAKSGSL 259
Query: 457 LEAEE 461
+ A +
Sbjct: 260 IHARK 264
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%)
Query: 323 KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH 382
K H+ L + L +DV + N L+N Y + G + K+F+EM RN VSW +++ ++ +
Sbjct: 21 KLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSRN 80
Query: 383 RLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
AL M G+ + F+ L AC
Sbjct: 81 GEHKEALVFLRDMVKEGVFSNHYAFVSALRACQE 114
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/524 (32%), Positives = 284/524 (54%), Gaps = 26/524 (4%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAIS---ACAG 112
A ++FD++ +R+++SW++MISG+ G L + QM L + A+ IS CA
Sbjct: 66 ASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAK 125
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
+L G+ +H+ ++K + N+L+ MY K G AL V+ + E N+VS+ ++
Sbjct: 126 SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSM 185
Query: 173 IAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
IAG+ + + + + M ++G+ D + L C+ S L G +H +
Sbjct: 186 IAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNM 245
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
SN FV N +M +Y+K + A F + KD+ISWNT +
Sbjct: 246 ASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGE---------------- 289
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
++PD T A IL ACA L++++ GK+IH +++R + D V NALV++Y KCG
Sbjct: 290 ------LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG 343
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
++ + LF+ + +++VSW +IA + H G A+ F +M+ GI+PD V+FI +L
Sbjct: 344 VLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILY 403
Query: 413 ACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDP 472
AC+H+GL+++G +F M+ + I P +EH+ C++DLL R G L +A ++ + P+ D
Sbjct: 404 ACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDA 463
Query: 473 IVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKML 532
+ G LL CR+ D+ + E++A+++F L+P T YVLL+N+YA W +V R+ +
Sbjct: 464 TIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKI 523
Query: 533 KDSGLKKEPSYSMIEVQGTFEKFTVA-EFSHSKIGEINYMLKTL 575
GL+K P S IE++G F SH +I +LK +
Sbjct: 524 GKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKM 567
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 180/366 (49%), Gaps = 28/366 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I S+L C+K+ L G ++H+ +K + + SN +L++Y+KCG + A +VF++M
Sbjct: 115 TIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKM 174
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
ERN+VSW++MI+G+ + G A+ QM + + S + ACA SL G+
Sbjct: 175 GERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGK 234
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H Y AS FV N+L+ MY K G A V+ +++S+N ++
Sbjct: 235 DVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG------ 288
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
L PD + A L C+ + L +G +H ++ S+ V N
Sbjct: 289 ---------------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVAN 333
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ LY K ++G A F +I KDL+SW IA + ++ F EM D G+
Sbjct: 334 ALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEM-RDAGIE 392
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN--ALVNMYAKCGLISCSY 358
PD+ +F SIL AC+ ++ G + ++++ N + + + +V++ ++ G +S +Y
Sbjct: 393 PDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAY 451
Query: 359 KLFNEM 364
K +
Sbjct: 452 KFIETL 457
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 190/414 (45%), Gaps = 70/414 (16%)
Query: 43 VLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYI 102
+++ YA CG + R+VFD M ++N+ W+ M+S + + G+ ++ F M
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIM-------- 53
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
++ ++G++ S A ++ +
Sbjct: 54 ----------VEKGIEGKR-----------------------------SESASELFDKLC 74
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
+ +++S+N++I+G+V N E+G ++K M+ G+ D + L C+ S L G
Sbjct: 75 DRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKA 134
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
+H L +K E NT++ +YSK + A + F + E++++SW + IA +
Sbjct: 135 VHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGW 194
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
+ + + ++M + GV+ D SIL ACA S+ +GK +H ++ + ++ V N
Sbjct: 195 SDGAIILLQQMEKE-GVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCN 253
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
AL++MYAKCG + + +F+ M+ ++++SWNT++ +KP
Sbjct: 254 ALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGE---------------------LKP 292
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
DS T +L AC ++ G+ + + G S D L+DL + G L
Sbjct: 293 DSRTMACILPACASLSALERGKEIHGYILRN-GYSSDRHVANALVDLYVKCGVL 345
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+++++ +L C+ AL++G +H +L+ G D V+N +++LY KCG + LAR +FD
Sbjct: 294 SRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFD 353
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
+ ++LVSW+ MI+G+ G A+ F++M + P+E F S + AC+
Sbjct: 354 MIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS 406
>gi|356522600|ref|XP_003529934.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial-like [Glycine max]
Length = 644
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 175/573 (30%), Positives = 303/573 (52%), Gaps = 11/573 (1%)
Query: 13 SKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWS 72
+K L +G LHA ++K G + + N +L +Y KC + A K+F+E+S RN+VSW+
Sbjct: 61 AKRALLPEGKQLHAHLIKFGFCHVLSLQNQILGVYLKCTEADDAEKLFEELSVRNVVSWN 120
Query: 73 AMISGHHQAGE-------HLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQI 122
+I G G+ +F +M L +P+ F C + G Q+
Sbjct: 121 ILIRGIVGCGDANENDSNQQQCFSYFKRMLLELVVPDSTTFNGLFGVCVKFHDIDMGFQL 180
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H +++K G FVG+ L+ +Y + G +A V+ +LV +N +I+ + N P
Sbjct: 181 HCFAVKLGLDLDCFVGSVLVDLYAQCGLVENARRVFLVVQHRDLVVWNVMISCYALNCLP 240
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E+ F +F LM G D F+F+ L IC G +H ++ +S+ V + +
Sbjct: 241 EEAFVMFNLMRWDGANGDEFTFSNLLSICDSLEYYDFGKQVHGHILRLSFDSDVLVASAL 300
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y+K I +A + F + +++++WNT I + + + + + +EM + G PD
Sbjct: 301 INMYAKNENIVDAHRLFDNMVIRNVVAWNTIIVGYGNRREGNEVMKLLREMLRE-GFSPD 359
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+ T +S ++ C ++++ Q HA ++ + + V N+L++ Y+KCG I+ + K F
Sbjct: 360 ELTISSTISLCGYVSAITETMQAHAFAVKSSFQEFLSVANSLISAYSKCGSITSACKCFR 419
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
++VSW ++I A+A H L A ++FE+M + GI PD ++F+G+L+AC+H GLV +
Sbjct: 420 LTREPDLVSWTSLINAYAFHGLAKEATEVFEKMLSCGIIPDQISFLGVLSACSHCGLVTK 479
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G YFN M Y I PD H+TCL+DLLGR G + EA E+ + P+ + LG +++C
Sbjct: 480 GLHYFNLMTSVYKIVPDSGHYTCLVDLLGRYGLINEAFEFLRSMPMEAESNTLGAFVASC 539
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
L ++ + + A++LF ++P Y ++SN+YAS W DV R+M+ + + P
Sbjct: 540 NLHANIGLAKWAAEKLFTIEPEKNVNYAVMSNIYASHRHWSDVERVRRMMGNKCDARVPG 599
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S IE+ F + H K E++ LK L
Sbjct: 600 CSWIEITNQVHSFVSNDKIHPKALEMHATLKML 632
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 182/326 (55%), Gaps = 8/326 (2%)
Query: 104 ASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE 163
A+A+ A L +G+Q+HA+ +KFG+ + + N ++ +Y+K + DA ++ E
Sbjct: 54 ANALKVSAKRALLPEGKQLHAHLIKFGFCHVLSLQNQILGVYLKCTEADDAEKLFEELSV 113
Query: 164 PNLVSFNALIAGFV-------ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSND 216
N+VS+N LI G V + ++ F FK ML + ++PD +F G +C +D
Sbjct: 114 RNVVSWNILIRGIVGCGDANENDSNQQQCFSYFKRMLLELVVPDSTTFNGLFGVCVKFHD 173
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA 276
+ G LHC VK L+ + FVG+ ++ LY++ L+ A + F +++ +DL+ WN I+
Sbjct: 174 IDMGFQLHCFAVKLGLDLDCFVGSVLVDLYAQCGLVENARRVFLVVQHRDLVVWNVMISC 233
Query: 277 CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ 336
+ E+ +F M D G D+FTF+++L+ C L GKQ+H H++R+ +
Sbjct: 234 YALNCLPEEAFVMFNLMRWD-GANGDEFTFSNLLSICDSLEYYDFGKQVHGHILRLSFDS 292
Query: 337 DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK 396
DV V +AL+NMYAK I +++LF+ M+ RNVV+WNTII + N R G +KL +M
Sbjct: 293 DVLVASALINMYAKNENIVDAHRLFDNMVIRNVVAWNTIIVGYGNRREGNEVMKLLREML 352
Query: 397 ATGIKPDSVTFIGLLTACNHAGLVKE 422
G PD +T ++ C + + E
Sbjct: 353 REGFSPDELTISSTISLCGYVSAITE 378
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 187/370 (50%), Gaps = 11/370 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ + + L C K + G LH +K+G+ D V + +++LYA+CG + AR+VF
Sbjct: 158 STTFNGLFGVCVKFHDIDMGFQLHCFAVKLGLDLDCFVGSVLVDLYAQCGLVENARRVFL 217
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP------NEYIFASAISACAGIQS 115
+ R+LV W+ MIS + + L E F +L+ +E+ F++ +S C ++
Sbjct: 218 VVQHRDLVVWNVMISCY---ALNCLPEEAFVMFNLMRWDGANGDEFTFSNLLSICDSLEY 274
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
G+Q+H + L+ + S V ++LI+MY K DA ++ N+V++N +I G
Sbjct: 275 YDFGKQVHGHILRLSFDSDVLVASALINMYAKNENIVDAHRLFDNMVIRNVVAWNTIIVG 334
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+ ++ + ++ + MLR+G PD + + + +C + + + M H VK +
Sbjct: 335 YGNRREGNEVMKLLREMLREGFSPDELTISSTISLCGYVSAITETMQAHAFAVKSSFQEF 394
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
V N++++ YSK I A K FRL E DL+SW + I A + ++ VF++M +
Sbjct: 395 LSVANSLISAYSKCGSITSACKCFRLTREPDLVSWTSLINAYAFHGLAKEATEVFEKMLS 454
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKCGLI 354
G+ PD +F +L+AC+ V G + + ++ D G LV++ + GLI
Sbjct: 455 -CGIIPDQISFLGVLSACSHCGLVTKGLHYFNLMTSVYKIVPDSGHYTCLVDLLGRYGLI 513
Query: 355 SCSYKLFNEM 364
+ +++ M
Sbjct: 514 NEAFEFLRSM 523
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 146/280 (52%), Gaps = 5/280 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S+LL C + G +H +L++ DV+V++ ++N+YAK ++ A ++FD M
Sbjct: 261 TFSNLLSICDSLEYYDFGKQVHGHILRLSFDSDVLVASALINMYAKNENIVDAHRLFDNM 320
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
RN+V+W+ +I G+ E ++ +M P+E +S IS C + ++ +
Sbjct: 321 VIRNVVAWNTIIVGYGNRREGNEVMKLLREMLREGFSPDELTISSTISLCGYVSAITETM 380
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q HA+++K + V NSLIS Y K G + A + EP+LVS+ +LI + +
Sbjct: 381 QAHAFAVKSSFQEFLSVANSLISAYSKCGSITSACKCFRLTREPDLVSWTSLINAYAFHG 440
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVG 239
++ EVF+ ML G++PD+ SF G L CS + KG+ + +T K+ +
Sbjct: 441 LAKEATEVFEKMLSCGIIPDQISFLGVLSACSHCGLVTKGLHYFNLMTSVYKIVPDSGHY 500
Query: 240 NTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACS 278
++ L ++ LI EA + R + E + + F+A+C+
Sbjct: 501 TCLVDLLGRYGLINEAFEFLRSMPMEAESNTLGAFVASCN 540
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 183/558 (32%), Positives = 293/558 (52%), Gaps = 49/558 (8%)
Query: 22 ISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQA 81
+SL + + D + N +L Y + G++ AR +F+ +E +++SW+A++SG+ Q
Sbjct: 147 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQW 206
Query: 82 GEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS--FVGN 139
G+ A E F +M P + + I + +G + A L F A + F
Sbjct: 207 GKMSEARELFDRM---PGRDVVSWNIMVSGYAR---RGDMVEARRL-FDAAPVRDVFTWT 259
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
+++S Y + G +A V+ E N VS+NA++A +++ + ++ E+F +M
Sbjct: 260 AVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM------- 312
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
C+ N NT++ Y++ ++ EA+ F
Sbjct: 313 -----------------------------PCR---NVASWNTMLTGYAQAGMLEEAKAVF 340
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+ +KD +SW +AA S E+ L +F EM G + FA +L+ CA +A++
Sbjct: 341 DTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGR-CGEWVNRSAFACVLSTCADIAAL 399
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
+ G Q+H LIR VGNAL+ MY KCG + + F EM R+VVSWNT+IA +
Sbjct: 400 ECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGY 459
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
A H G AL++F+ M+ T KPD +T +G+L AC+H+GLV++G +YF SM +G++
Sbjct: 460 ARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAK 519
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLF 499
EH+TC+IDLLGRAG+L EA + K P D + G LL A R+ R+ +G A+++F
Sbjct: 520 PEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIF 579
Query: 500 HLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAE 559
L+P YVLLSN+YAS G W D R M+++ G+KK P +S IEVQ F+ +
Sbjct: 580 ELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGD 639
Query: 560 FSHSKIGEINYMLKTLSL 577
H + +I L+ L +
Sbjct: 640 CVHPEKEKIYAFLEDLDM 657
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 143/332 (43%), Gaps = 56/332 (16%)
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL 198
N I+ +M+ G +DA ++ + ++NA++AG+ N + +F+ + R
Sbjct: 42 NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR---- 97
Query: 199 PDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
PD +S+ L +VS+ L + + V+ + N +++ ++ L+ A
Sbjct: 98 PDNYSYNTLLHALAVSSSLADARGLFDEMPVR-----DSVTYNVMISSHANHGLVSLARH 152
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F L EKD +SWN +AA E+ +F + ++ S A +G
Sbjct: 153 YFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRT--------EWDVISWNALMSGY- 203
Query: 318 SVQHGKQIHAHLIRMRLN--------------------------------QDVGVGNALV 345
VQ GK A + R+ +DV A+V
Sbjct: 204 -VQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVV 262
Query: 346 NMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV 405
+ YA+ G++ + ++F+ M RN VSWN ++AA+ R+ A +LF M +
Sbjct: 263 SGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNV----A 318
Query: 406 TFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
++ +LT AG+++E +A F++M + +S
Sbjct: 319 SWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVS 350
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 122/292 (41%), Gaps = 55/292 (18%)
Query: 231 KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVF 290
+LE N + + + + +AE+ F + + ++N +A S S+F
Sbjct: 33 RLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF 92
Query: 291 KEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
+ + RPD++++ ++L A A +S+ +
Sbjct: 93 RAIP-----RPDNYSYNTLLHALAVSSSLADAR--------------------------- 120
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGL 410
LF+EM R+ V++N +I++HANH L A F+ + D+V++ G+
Sbjct: 121 --------GLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFD----LAPEKDAVSWNGM 168
Query: 411 LTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQ 470
L A G V+E FNS + D+ + L+ + GK+ EA E + P G+
Sbjct: 169 LAAYVRNGRVEEARGLFNSRTEW-----DVISWNALMSGYVQWGKMSEARELFDRMP-GR 222
Query: 471 DPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTS-PYVLLSNLYASDGM 521
D + ++S R D+V A++LF P + + + YA +GM
Sbjct: 223 DVVSWNIMVSGYARRGDMV----EARRLFDAAPVRDVFTWTAVVSGYAQNGM 270
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 189/573 (32%), Positives = 313/573 (54%), Gaps = 19/573 (3%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
LH C+ +++ +HA ++K + D+ V+ +++ ++ C +M LA VF+++ + N+
Sbjct: 30 LHKCTDFNHIKE---VHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQDPNV 86
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAY 125
++ +I H Q + L A F M L + + + + AC G L Q IH +
Sbjct: 87 HLYNTLIRAHVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCH 146
Query: 126 SLKFGYASISFVGNSLISMYMKVGY--SSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
K+G+ FV NSLI Y K G + A+ ++ E E +LVS+N++I G V+
Sbjct: 147 VEKYGFFGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLG 206
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL-ESNPFVGNTI 242
+ ++F M + D S+ L+ ++ G + + K+ E N +T+
Sbjct: 207 RARKLFDEMAER----DAVSWNTILD-----GYVKAGEMSQAFNLFEKMPERNVVSWSTM 257
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
++ Y K + A F + K+L++W I+ + ++ +++ +M G++PD
Sbjct: 258 VSGYCKTGDMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEA-AGLKPD 316
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
D T SILAACA + GK++HA + ++R+ V V NALV+MYAKCG + + +FN
Sbjct: 317 DGTLISILAACAESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFN 376
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
EM R++VSWN ++ A H G A++LF +M+ G KPD VT I +L AC HAG V +
Sbjct: 377 EMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQ 436
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G +YFNSME+ +GI P IEH+ C+IDLLGR G+L EA + P+ + ++ GTLL AC
Sbjct: 437 GLSYFNSMERDHGIVPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLLGAC 496
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
R+ V + E++ +L L+ + Y +LSN++A+ G W VA R +K +G++K
Sbjct: 497 RVHNAVPLAEKVLDRLITLEQSDPGNYSMLSNIFAAAGDWNSVANMRLQMKSTGVQKPSG 556
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S IE+ +FTV + SH + +I +L L
Sbjct: 557 ASSIELDDEVHEFTVFDKSHPETDKIYQILVKL 589
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 186/399 (46%), Gaps = 24/399 (6%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMIL--ARKVFDEMSE 65
LL C+ L +H V K G D+ V N +++ Y+KCG + + A K+F EM E
Sbjct: 127 LLKACNGKGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGE 186
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVK-GQQIHA 124
++LVSW++MI G +AG+ A + F +M A+S + VK G+ A
Sbjct: 187 KDLVSWNSMIGGLVKAGDLGRARKLFDEM-------AERDAVSWNTILDGYVKAGEMSQA 239
Query: 125 YSLKFGYASISFVG-NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
++L + V ++++S Y K G A +++ + NLV++ +I+GF E +
Sbjct: 240 FNLFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAK 299
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ ++ M GL PD + L C+ S L G +H K +++ + V N ++
Sbjct: 300 EATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLGKKVHASIKKIRIKCSVNVSNALV 359
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y+K + +A F + +DL+SWN + + EK + +F +M + G +PD
Sbjct: 360 DMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQE-GFKPDK 418
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG------NALVNMYAKCGLISCS 357
T +IL AC V G + R D G+ ++++ + G + +
Sbjct: 419 VTLIAILCACTHAGFVDQGLSYFNSMER-----DHGIVPHIEHYGCMIDLLGRGGRLEEA 473
Query: 358 YKLFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQM 395
++L M + N V W T++ A H A K+ +++
Sbjct: 474 FRLVQSMPMEPNDVIWGTLLGACRVHNAVPLAEKVLDRL 512
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+L C+++ L G +HA++ K+ I+ V VSN ++++YAKCG++ A +F+EM
Sbjct: 319 TLISILAACAESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEM 378
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
S R+LVSW+ M+ G G A++ FS+M P++ + + AC
Sbjct: 379 SMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACT 429
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 186/631 (29%), Positives = 330/631 (52%), Gaps = 64/631 (10%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER-- 66
L C + + G +LH + G + +V V N ++ +Y++CG + A VFDE++ +
Sbjct: 156 LKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGI 215
Query: 67 -NLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYI---------FASAISACAGIQSL 116
+++SW+++++ H + ALE FS+M ++ +E + + ACA +++L
Sbjct: 216 DDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKAL 275
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY------------------ 158
+ ++IH+Y+++ G + +FV N+LI Y K G +DA+ V+
Sbjct: 276 PQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGY 335
Query: 159 ------GEAFE----------P-NLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDR 201
G AFE P ++++++A+IAG+ + ++ + F+ M+ G P+
Sbjct: 336 TQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNS 395
Query: 202 FSFAGGLEICSVSNDLRKGMILHCLTVK-CKLE-----------SNPFVGNTIMALYSKF 249
+ L C+ L +GM +H ++K C L + V N ++ +YSK
Sbjct: 396 VTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKC 455
Query: 250 NLIGEAEKAFRLI--EEKDLISWNTFIAACSHCADYEKGLSVFKEM-SNDHGVRPDDFTF 306
A F I E+++++W I + D L +F EM S + V P+ +T
Sbjct: 456 RSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTI 515
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQD--VGVGNALVNMYAKCGLISCSYKLFNEM 364
+ IL ACA LA+++ GKQIHA++ R + V N L++MY+KCG + + +F+ M
Sbjct: 516 SCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSM 575
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
RN VSW ++++ + H G AL +F++M+ G PD ++F+ LL AC+H+G+V +G
Sbjct: 576 PKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGL 635
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRL 484
YF+ M + Y + EH+ C+IDLL R G+L +A + ++ P+ ++ LLSACR+
Sbjct: 636 NYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRV 695
Query: 485 RRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYS 544
+V + E +L +++ Y L+SN+YA+ W DVA R+++K SG+KK P S
Sbjct: 696 HSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCS 755
Query: 545 MIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
++ + F V + SH EI +L+ L
Sbjct: 756 WVQGKKGTASFFVGDRSHPLSPEIYSLLERL 786
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/488 (23%), Positives = 212/488 (43%), Gaps = 63/488 (12%)
Query: 43 VLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPN 99
V+ Y CG A V + ++ V W+ ++ H + G A+ +M P+
Sbjct: 89 VVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPD 148
Query: 100 EYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG 159
+ A+ AC + S G+ +H G+ S FV N+L++MY + G DA LV+
Sbjct: 149 HFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFD 208
Query: 160 EAFE---PNLVSFNALIAGFVENQQPEKGFEVF---KLMLRQGLLPDR---FSFAGGLEI 210
E +++S+N+++A V+ P E+F +++ + +R S L
Sbjct: 209 EITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPA 268
Query: 211 CSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
C+ L + +H ++ ++ FV N ++ Y+K + +A K F ++E KD++SW
Sbjct: 269 CASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSW 328
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDH--------------------------------- 297
N + + ++ +F+ M ++
Sbjct: 329 NAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMIL 388
Query: 298 -GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRL------------NQDVGVGNAL 344
G P+ T S+L+ACA L ++ G +IHA+ ++ L +D+ V NAL
Sbjct: 389 DGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNAL 448
Query: 345 VNMYAKCGLISCSYKLFNEM--LHRNVVSWNTIIAAHANHRLGGSALKLFEQM--KATGI 400
++MY+KC + +F+ + RNVV+W +I +A + ALK+F +M K +
Sbjct: 449 IDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAV 508
Query: 401 KPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF-TCLIDLLGRAGKLLEA 459
P++ T +L AC H ++ G+ + + + P + CLID+ + G + A
Sbjct: 509 APNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTA 568
Query: 460 EEYTKKFP 467
P
Sbjct: 569 RNVFDSMP 576
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 207/460 (45%), Gaps = 72/460 (15%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
SI ++L C+ KAL Q +H+ ++ G D V N +++ YAKCG M A KVF+ M
Sbjct: 261 SIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVM 320
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---------------------------- 95
+++VSW+AM++G+ Q+G A E F M
Sbjct: 321 EFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEAL 380
Query: 96 ------LL----PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS---------- 135
+L PN S +SACA + +L +G +IHAYSLK S+
Sbjct: 381 DAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGE 440
Query: 136 --FVGNSLISMYMKVGYSSDALLVYGE--AFEPNLVSFNALIAGFVENQQPEKGFEVFKL 191
V N+LI MY K A ++ E N+V++ +I G+ + ++F
Sbjct: 441 DLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSE 500
Query: 192 MLRQ--GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP---FVGNTIMALY 246
M+ + + P+ ++ + L C+ LR G +H + E P FV N ++ +Y
Sbjct: 501 MISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTR-HHEYEPSVYFVANCLIDMY 559
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
SK + A F + +++ +SW + ++ ++ L +F +M G PDD +F
Sbjct: 560 SKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQK-AGFVPDDISF 618
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA-----LVNMYAKCGLISCSYKLF 361
+L AC+ V G + MR + DV V +A ++++ A+CG + ++K
Sbjct: 619 LVLLYACSHSGMVDQGLN---YFDIMRRDYDV-VASAEHYACVIDLLARCGRLDKAWKTI 674
Query: 362 NEM-LHRNVVSWNTIIAA---HANHRLGGSALKLFEQMKA 397
EM + + V W +++A H+N L AL MKA
Sbjct: 675 QEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKA 714
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 148/308 (48%), Gaps = 8/308 (2%)
Query: 131 YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFK 190
Y S +G +++ Y+ G + DAL V V +N L+ ++ ++ V
Sbjct: 79 YVSPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSC 138
Query: 191 LMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN 250
MLR G PD F+ L+ C G LH L ESN FV N ++A+YS+
Sbjct: 139 RMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCG 198
Query: 251 LIGEAEKAFRLIEEK---DLISWNTFIAACSHCADYEKGLSVFKEMS-----NDHGVRPD 302
+ +A F I K D+ISWN+ +AA ++ L +F EMS R D
Sbjct: 199 SLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSD 258
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+ +IL ACA L ++ K+IH++ IR D V NAL++ YAKCG ++ + K+FN
Sbjct: 259 IISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFN 318
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
M ++VVSWN ++ + G+A +LFE M+ I D +T+ ++ G +E
Sbjct: 319 VMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQE 378
Query: 423 GEAYFNSM 430
F M
Sbjct: 379 ALDAFQQM 386
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 210/472 (44%), Gaps = 102/472 (21%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGI------------QPDVIVSNHVLNLYAKCG 51
+I SLL C+ AL QG+ +HA LK + D++V N ++++Y+KC
Sbjct: 397 TIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCR 456
Query: 52 KMILARKVFDEMS--ERNLVSWSAMISGHHQAGEHLLALEFFSQM-----HLLPNEYIFA 104
AR +FD + ERN+V+W+ MI G+ Q G+ AL+ FS+M + PN Y +
Sbjct: 457 SFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTIS 516
Query: 105 SAISACAGIQSLVKGQQIHAYSLKFG--YASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+ ACA + +L G+QIHAY + S+ FV N LI MY K G A V+
Sbjct: 517 CILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMP 576
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
+ N VS+ ++++G+ + + ++ ++F M + G +PD SF L CS S + +G+
Sbjct: 577 KRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGL- 635
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
N + ++++ AE +I DL+ + C
Sbjct: 636 -----------------NYFDIMRRDYDVVASAEHYACVI---DLL---------ARCGR 666
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
+K +EM + P + ++L+AC ++V+ L LN+
Sbjct: 667 LDKAWKTIQEMP----MEPSAVIWVALLSACRVHSNVE--------LAEYALNK------ 708
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK- 401
LVNM A+ N S+ I +AN R ++ + MK +GIK
Sbjct: 709 -LVNMKAE-----------------NDGSYTLISNIYANARRWKDVARIRQLMKKSGIKK 750
Query: 402 -PDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
P G K+G A F ++++ +SP+I ++ L L+GR
Sbjct: 751 RPGCSWVQG-----------KKGTASFFVGDRSHPLSPEI--YSLLERLIGR 789
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 185/570 (32%), Positives = 311/570 (54%), Gaps = 12/570 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNL-YAKCGKMILARKVFDEMSE 65
SLL + S ++ Q +S HA + G+ D +VS+ +L + +R +F ++ +
Sbjct: 33 SLLQNLSHPRSFNQILS-HA--IASGVFRDPVVSSKLLYYSLSHDHDFAFSRTLFFQIHK 89
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQI 122
N+ SW+ M + ++ + ++ M LP+ Y F + ACA + L KG++I
Sbjct: 90 PNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGREI 149
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG--EAFEPNLVSFNALIAGFVENQ 180
H+ +LK G FV N+LIS + G A V+ A ++VS+N++I+G++++
Sbjct: 150 HSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSH 209
Query: 181 QPEKGFEVFKLMLRQGLL-PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ E +VF +L G L PD + L +C L G +H L + FVG
Sbjct: 210 RYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVG 269
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++++ +YSK I +A K F I ++ + W + IA + +++ + +F+EM G
Sbjct: 270 SSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIG-GF 328
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
D T A +L+AC ++ G+ IH + R + D+ NAL+ MY+KCG I + +
Sbjct: 329 AADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALE 388
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA-TGIKPDSVTFIGLLTACNHAG 418
+F+ + ++ SW+ +I+ A + AL LF QM+ + I+P+ +TF+G+L ACNH G
Sbjct: 389 IFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGG 448
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
V +G YFN+M + Y ++P IEH+ C++DLLGRA L+EAE++ + P+ D ++ +L
Sbjct: 449 FVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSL 508
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
L ACR ++ + E AKQ+ L+P VLLSN+YAS WGDV RK + +K
Sbjct: 509 LFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASRWGDVKRVRKDMATQRIK 568
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
K+P S +E+ G + VA+ SH ++G I
Sbjct: 569 KQPGCSFVEIDGLVHELFVADRSHPEMGAI 598
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 201/404 (49%), Gaps = 11/404 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S +L C++ L +G +H++ LK+G+ DV V N +++ ++ CG + AR VFD +
Sbjct: 129 SFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDML 188
Query: 64 SE--RNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLV 117
R++VSW++MISG+ Q+ + LAL+ F ++ L P+E SA+S C + L
Sbjct: 189 PALVRDVVSWNSMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLD 248
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G++IH G+ FVG+SLI MY K G DA V+ N V + ++IAG+
Sbjct: 249 LGKKIHGLFTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYA 308
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
++ ++ E+F+ M G D + A L C L +G +H + +E +
Sbjct: 309 QSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLN 368
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
N ++ +YSK I +A + F + + D+ SW+ I+ + + +K L +F +M
Sbjct: 369 ARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMIS 428
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKCGLISC 356
+RP++ TF +L AC V G + ++ L + +V++ + L+
Sbjct: 429 DIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVE 488
Query: 357 SYKLFNEM-LHRNVVSWNTIIAA---HANHRLGGSALKLFEQMK 396
+ K + + +VV W +++ A H N L A K E+++
Sbjct: 489 AEKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELE 532
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A +I+ +L C AL QG +H + I+ D+ N ++ +Y+KCG + A ++F
Sbjct: 332 AATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFH 391
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISAC 110
+++ ++ SWSA+ISG GE AL FSQM ++ PNE F + AC
Sbjct: 392 GLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCAC 444
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 170/474 (35%), Positives = 265/474 (55%), Gaps = 4/474 (0%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
F S + C I + +Q+HA G V N L+ M K A L++ +
Sbjct: 6 FISTLFKCRNIFQI---KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKME 62
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
E + VS++ +I GFV+N E+ F+ F+ ++R G PD FS ++ C + L G +
Sbjct: 63 ERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRL 122
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
+H +K L + FV +T++ +Y+K +I A++ F + +KDL++ IA + C
Sbjct: 123 IHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGK 182
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
+ +F +M D G PD +I+ ACA L ++ + +H ++ R + DV +G
Sbjct: 183 PNESWVLFDQMRRD-GFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGT 241
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
A+++MYAKCG I S ++F+ M +NV+SW+ +I A+ H G AL+LF M +GI P
Sbjct: 242 AMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIP 301
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
+ +TFI LL AC+HAGLV +G F+ M +YG+ PD++H+TC++DLLGRAG+L +A
Sbjct: 302 NRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRL 361
Query: 463 TKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMW 522
+ + +D + L ACR+ R V + E+ AK L LQ Y+LLSN+YA+ G W
Sbjct: 362 IENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRW 421
Query: 523 GDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
DVA R ++ LKK P Y+ IEV +F + SH + EI MLK+LS
Sbjct: 422 KDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLS 475
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 185/375 (49%), Gaps = 6/375 (1%)
Query: 14 KTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSA 73
K + + Q +HA V GI D+IV+N +L + AK ++ A +F++M ER+ VSWS
Sbjct: 12 KCRNIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSV 71
Query: 74 MISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFG 130
MI G + G++ + F ++ P+ + I AC L+ G+ IH+ LK G
Sbjct: 72 MIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNG 131
Query: 131 YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFK 190
+FV ++L+ MY K G +A ++ + +LV+ +IAG+ E +P + + +F
Sbjct: 132 LHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFD 191
Query: 191 LMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN 250
M R G +PD+ + + C+ + K ++H + + +G ++ +Y+K
Sbjct: 192 QMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCG 251
Query: 251 LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
I + + F +E+K++ISW+ I A + + L +F M N G+ P+ TF S+L
Sbjct: 252 SIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNS-GIIPNRITFISLL 310
Query: 311 AACAGLASVQHGKQIHAHL-IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM-LHRN 368
AC+ V G Q+ + + + + DV +V++ + G + + +L M + ++
Sbjct: 311 YACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKD 370
Query: 369 VVSWNTIIAAHANHR 383
W + A HR
Sbjct: 371 EGIWCAFLGACRIHR 385
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 148/284 (52%), Gaps = 15/284 (5%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S+ ++ C T L G +H+ VLK G+ D V + ++++YAKCG + A+++FD M
Sbjct: 103 SLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRM 162
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+++LV+ + MI+G+ + G+ + F QM +P++ + ++ACA + ++ K +
Sbjct: 163 PKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKAR 222
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H Y Y+ +G ++I MY K G + ++ + N++S++A+I + +
Sbjct: 223 LVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHG 282
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
Q + E+F +ML G++P+R +F L CS + + G+ L L + + V
Sbjct: 283 QGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSL-----MSVSYGVRP 337
Query: 241 TIMALYSKFNLIGEA---EKAFRLIE----EKDLISWNTFIAAC 277
+ +L+G A ++A RLIE EKD W F+ AC
Sbjct: 338 DVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGAC 381
>gi|297794367|ref|XP_002865068.1| hypothetical protein ARALYDRAFT_920083 [Arabidopsis lyrata subsp.
lyrata]
gi|297310903|gb|EFH41327.1| hypothetical protein ARALYDRAFT_920083 [Arabidopsis lyrata subsp.
lyrata]
Length = 659
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 185/571 (32%), Positives = 303/571 (53%), Gaps = 30/571 (5%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+S L C ++ + G SLHA K + V V ++LN+Y + GK+ ++F EM
Sbjct: 90 LSVALKACGQSSNIGYGESLHAYAFKTSLLTSVFVGTNLLNMYMRTGKIDKGCRIFTEMQ 149
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQ 121
RN V+W+A++SG +AG H L +FS+M L +++ FA+A+ ACA ++ + G++
Sbjct: 150 FRNTVTWTAIVSGMVEAGRHKEGLTYFSEMSRSKGLSDDFAFATALKACARLRQVKYGKE 209
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
IH + + G + V NSLI+MY + G D + ++ E ++ S+ LI + + Q
Sbjct: 210 IHTHVIVRGSDASLCVVNSLINMYTECGEMHDGVHLFESMSERDVFSWTTLIDAYSQMGQ 269
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
EK F +EI ++ T C L + V N+
Sbjct: 270 EEKAVATFL----------------KIEIFRRTSQ---------WTYFC-LGDSLSVSNS 303
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+M +YS + A F+ + +D+I+W+T I S E+ F M G +P
Sbjct: 304 MMKMYSTCGKLDSASVLFQGMRRRDIITWSTIIGGYSQAGLGEEVFMCFSWM-RQAGPKP 362
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D AS+L+ +A ++ G+Q+HA + + L Q+ + +AL+NMY+KCG I + K+F
Sbjct: 363 TDPALASLLSVSGTMAVLEQGRQVHALALYLGLEQNSTIRSALINMYSKCGSIEEASKIF 422
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
E ++VS +I +A H A+ LFE+ G++PD+VTFI +LTAC+H+G +
Sbjct: 423 EETDTDDIVSLTAMINGYAEHGNTKEAIDLFEKSLKVGLRPDTVTFISVLTACSHSGQLD 482
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
G YFN M+ Y I P EH+ C++DLL RAG+L +AE+ + P +D +V TLL+A
Sbjct: 483 LGFRYFNLMQDEYNIRPVKEHYGCMVDLLCRAGRLSDAEKMINEMPWKKDDVVWTTLLNA 542
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
C+ + D G R A+++ L PT+ + +V L+N+Y+S G + A RK +K G+ K P
Sbjct: 543 CKAKGDTERGRRAAERILELDPTSETAFVTLANIYSSTGKLEEAAHVRKAMKSKGVIKVP 602
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYML 572
+S I++ F SHS+ +I +L
Sbjct: 603 GWSSIKIMDRASTFVSGSQSHSQSEDIYSIL 633
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 127/525 (24%), Positives = 232/525 (44%), Gaps = 71/525 (13%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACA 111
AR +FD+M R++VSW+A+I+G+ A AL FS + + P+ + + A+ AC
Sbjct: 39 ARHLFDQMPHRDIVSWTAIINGYVTAANSFEALNLFSALLFDPAVSPDTSVLSVALKACG 98
Query: 112 GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNA 171
++ G+ +HAY+ K + FVG +L++MYM+ G ++ E N V++ A
Sbjct: 99 QSSNIGYGESLHAYAFKTSLLTSVFVGTNLLNMYMRTGKIDKGCRIFTEMQFRNTVTWTA 158
Query: 172 LIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK 231
+++G VE + ++G F M R L D F+FA L+ C+ ++ G +H +
Sbjct: 159 IVSGMVEAGRHKEGLTYFSEMSRSKGLSDDFAFATALKACARLRQVKYGKEIHTHVIVRG 218
Query: 232 LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK 291
+++ V N+++ +Y++ + + F + E+D+ SW T I A S EK ++ F
Sbjct: 219 SDASLCVVNSLINMYTECGEMHDGVHLFESMSERDVFSWTTLIDAYSQMGQEEKAVATFL 278
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
++ + R +T+ C G + V N+++ MY+ C
Sbjct: 279 KI--EIFRRTSQWTY-----FCLG--------------------DSLSVSNSMMKMYSTC 311
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
G + + LF M R++++W+TII ++ LG F M+ G KP LL
Sbjct: 312 GKLDSASVLFQGMRRRDIITWSTIIGGYSQAGLGEEVFMCFSWMRQAGPKPTDPALASLL 371
Query: 412 TACNHAGLVKEGE-----AYFNSMEKTYGI-------------------------SPDIE 441
+ ++++G A + +E+ I + DI
Sbjct: 372 SVSGTMAVLEQGRQVHALALYLGLEQNSTIRSALINMYSKCGSIEEASKIFEETDTDDIV 431
Query: 442 HFTCLIDLLGRAGKLLEAE---EYTKKFPLGQDPIVLGTLLSACRLRRDVVIGER---LA 495
T +I+ G EA E + K L D + ++L+AC + +G R L
Sbjct: 432 SLTAMINGYAEHGNTKEAIDLFEKSLKVGLRPDTVTFISVLTACSHSGQLDLGFRYFNLM 491
Query: 496 KQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
+ ++++P Y + +L G D A KM+ + KK+
Sbjct: 492 QDEYNIRP-VKEHYGCMVDLLCRAGRLSD---AEKMINEMPWKKD 532
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/469 (23%), Positives = 193/469 (41%), Gaps = 75/469 (15%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++ L C++ + ++ G +H V+ G + V N ++N+Y +CG+M +F+ M
Sbjct: 190 AFATALKACARLRQVKYGKEIHTHVIVRGSDASLCVVNSLINMYTECGEMHDGVHLFESM 249
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
SER++ SW+ +I + Q G+ A+ F ++ + + C G
Sbjct: 250 SERDVFSWTTLIDAYSQMGQEEKAVATFLKIEIFRRT---SQWTYFCLG----------- 295
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
S+S V NS++ MY G A +++ ++++++ +I G+ + E
Sbjct: 296 --------DSLS-VSNSMMKMYSTCGKLDSASVLFQGMRRRDIITWSTIIGGYSQAGLGE 346
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ F F M + G P + A L + L +G +H L + LE N + + ++
Sbjct: 347 EVFMCFSWMRQAGPKPTDPALASLLSVSGTMAVLEQGRQVHALALYLGLEQNSTIRSALI 406
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+YSK I EA K F + D++S I + + ++ + +F E S G+RPD
Sbjct: 407 NMYSKCGSIEEASKIFEETDTDDIVSLTAMINGYAEHGNTKEAIDLF-EKSLKVGLRPDT 465
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQD-------VGVGNALVNMYAKCGLISC 356
TF S+L AC+ H Q+ L QD +V++ + G +S
Sbjct: 466 VTFISVLTACS------HSGQLDLGFRYFNLMQDEYNIRPVKEHYGCMVDLLCRAGRLSD 519
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ K+ NEM W K D V + LL AC
Sbjct: 520 AEKMINEM------PW----------------------------KKDDVVWTTLLNACKA 545
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEH-FTCLIDLLGRAGKLLEAEEYTK 464
G + G + E+ + P E F L ++ GKL EA K
Sbjct: 546 KGDTERGR---RAAERILELDPTSETAFVTLANIYSSTGKLEEAAHVRK 591
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 77/172 (44%)
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
G A F + +D++SW I A+ + L++F + D V PD + L A
Sbjct: 37 GAARHLFDQMPHRDIVSWTAIINGYVTAANSFEALNLFSALLFDPAVSPDTSVLSVALKA 96
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
C +++ +G+ +HA+ + L V VG L+NMY + G I ++F EM RN V+W
Sbjct: 97 CGQSSNIGYGESLHAYAFKTSLLTSVFVGTNLLNMYMRTGKIDKGCRIFTEMQFRNTVTW 156
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
I++ L F +M + D F L AC VK G+
Sbjct: 157 TAIVSGMVEAGRHKEGLTYFSEMSRSKGLSDDFAFATALKACARLRQVKYGK 208
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 171/488 (35%), Positives = 274/488 (56%), Gaps = 7/488 (1%)
Query: 91 FSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLI---SMYMK 147
FS+ + N+ S +S C + L +QI AY++K S V LI ++
Sbjct: 20 FSKNEFVINQLHPLSLLSKCTSLNEL---KQIQAYTIKTNLQSDISVLTKLINFCTLNPT 76
Query: 148 VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGG 207
Y A ++ + + +++ FN + G+ + P F +F +L GLLPD ++F+
Sbjct: 77 TSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSL 136
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDL 267
L+ C+ S LR+GM LHC VK L N ++ T++ +Y++ N + A F +E+ +
Sbjct: 137 LKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCI 196
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHA 327
+S+N I + + + LS+F+E+ + + P D T S++ +CA L ++ GK IH
Sbjct: 197 VSYNAIITGYARSSQPNEALSLFRELQASN-IEPTDVTMLSVIMSCALLGALDLGKWIHE 255
Query: 328 HLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGS 387
++ + ++ V V AL++M+AKCG ++ + +F M R+ +W+ +I A A H G
Sbjct: 256 YVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLK 315
Query: 388 ALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLI 447
A+ +FE+MK G++PD +TF+GLL AC+HAGLV++G YF SM KTYGI+P I+H+ C++
Sbjct: 316 AISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMV 375
Query: 448 DLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTS 507
DLLGRAG L EA + K + PI+ TLLSAC +V + +R+ +++F L
Sbjct: 376 DLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGG 435
Query: 508 PYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGE 567
YV+LSNLYA G W DV RK++KD G+ K P S +EV +F + H E
Sbjct: 436 DYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVE 495
Query: 568 INYMLKTL 575
+ L L
Sbjct: 496 LRRALDEL 503
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 169/336 (50%), Gaps = 22/336 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SSLL C+ +KAL++G+ LH +K+G+ ++ + ++N+YA+C M AR VFDEM
Sbjct: 132 TFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEM 191
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ +VS++A+I+G+ ++ + AL F ++ ++ P + S I +CA + +L G+
Sbjct: 192 EQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGK 251
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IH Y K G+ V +LI M+ K G +DA+ ++ + +++A+I F +
Sbjct: 252 WIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHG 311
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
K +F+ M R+G+ PD +F G L CS G++ + +
Sbjct: 312 DGLKAISMFEEMKREGVRPDEITFLGLLYACS-----HAGLVEQGRGYFYSMSKTYGITP 366
Query: 241 TIMALYSKFNLIGEA---EKAFRLIEEKDL----ISWNTFIAACSHCADYEKGLSVFK-- 291
I +L+G A ++A+ +++ ++ I W T ++ACS + E V +
Sbjct: 367 GIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERI 426
Query: 292 -EMSNDHGVRPDDFTFASILAACAG-LASVQHGKQI 325
E+ + HG D+ S L A G V H +++
Sbjct: 427 FELDDAHG---GDYVILSNLYARVGRWEDVNHLRKL 459
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 195/652 (29%), Positives = 327/652 (50%), Gaps = 84/652 (12%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+ LL CSK+ QQ +H+ ++ G ++ V+++YA G + A++VF E+S
Sbjct: 38 NDLLQQCSKSHLSQQ---IHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVF-EVSP 93
Query: 66 ----RNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVK 118
NL+ W++++ + G ALE + +M L + + F I ACA + S
Sbjct: 94 IECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKL 153
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+ +H + ++ G+ VGN L+ MY K+G DA V+ + VS+N +++G+
Sbjct: 154 CRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYAL 213
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE----------------------------- 209
N E+F++M GL P+ ++ L
Sbjct: 214 NYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEA 273
Query: 210 ---ICSVSNDL---RKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIE 263
+ SVS DL +G ++H VK E+ FV N+++ LY K + A F I+
Sbjct: 274 LAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIK 333
Query: 264 EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG---VRPD------------------ 302
K+++SWN I++ + ++ ++F ++ VRP+
Sbjct: 334 TKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGE 393
Query: 303 -----------------DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALV 345
T AS+L+ CA LA++ G++IH H++R ++ ++ VGN L+
Sbjct: 394 EALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLI 453
Query: 346 NMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV 405
NMY K G +F ++ +++++SWNT++A + H LG +A++ F+QM G +PD V
Sbjct: 454 NMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGV 513
Query: 406 TFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKK 465
TF+ +L+AC+HAGLV EG F+ M K + + P +EH+ C++DLLGRAG L EA + K
Sbjct: 514 TFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKS 573
Query: 466 FPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDV 525
P+ + V G LL++CR+ ++ + E A Q+F+L Y+LLSN+YA+ G W D
Sbjct: 574 MPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDS 633
Query: 526 AGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
A R K GLKK P S I+V+ F+ H+++ E+ +LK L L
Sbjct: 634 AKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDLGL 685
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 179/406 (44%), Gaps = 58/406 (14%)
Query: 79 HQAGEHLLALEFF-------SQMHLLPNEYI---FASAISACAGIQSLVKGQQIHAYSLK 128
H + L+++ F S +H PN + F + C+ QQIH+ +
Sbjct: 3 HGSSRRLISISFLPNLSRSISIIHHQPNNDVLDFFNDLLQQCSKSH---LSQQIHSQIIV 59
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYG----EAFEPNLVSFNALIAGFVENQQPEK 184
G +F+ ++S+Y G SDA V+ E F NL+ +N+++ V + E+
Sbjct: 60 TGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFS-NLLLWNSILRANVAHGYCEE 118
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
E++ M + G+ D F+F + C++ + +H V+ + N VGN +M
Sbjct: 119 ALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMG 178
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y K + +A K F + + +SWNT ++ + D +F+ M + G+ P+
Sbjct: 179 MYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGS-AGLEPNLV 237
Query: 305 TFASILAACA-----------------------------------GLASVQHGKQIHAHL 329
T+ S+L++ A LA+ GK IH ++
Sbjct: 238 TWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYV 297
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
++ + V N+L+ +Y K G ++ + LF E+ +N+VSWN +I+++A+ A
Sbjct: 298 VKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAF 357
Query: 390 KLFEQMKATG----IKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
+F Q++ T ++P+ V++ ++ G +E F M+
Sbjct: 358 AIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQ 403
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 139/320 (43%), Gaps = 44/320 (13%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A++++ +L A +G +H V+K G + + V N ++ LY K G + AR +F
Sbjct: 271 AEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFL 330
Query: 62 EMSERNLVSWSAMIS---------------------------------------GHHQAG 82
E+ +N+VSW+A+IS G G
Sbjct: 331 EIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKG 390
Query: 83 EHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
+ ALE F +M L N AS +S CA + +L G++IH + ++ VGN
Sbjct: 391 QGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGN 450
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
LI+MY K G + LV+ + +L+S+N ++AG+ + E F M++ G P
Sbjct: 451 GLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEP 510
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVK-CKLESNPFVGNTIMALYSKFNLIGEAEKA 258
D +F L CS + + +G L +K ++E ++ L + L+ EA K
Sbjct: 511 DGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKV 570
Query: 259 FRLIE-EKDLISWNTFIAAC 277
+ + E + W + +C
Sbjct: 571 VKSMPVEPNACVWGALLNSC 590
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 182/548 (33%), Positives = 289/548 (52%), Gaps = 37/548 (6%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGH---HQ 80
LH + + + + ++ YA CG+ L RKVFDEMS+RN+V ++ MI + H+
Sbjct: 40 LHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHR 99
Query: 81 AGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
+ LL P+ Y + + AC+ ++L G IH LK G FVGN
Sbjct: 100 YDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNG 159
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
LI+MY K G +A V+ E ++VS+N+++AG+ N + + E+ + M G PD
Sbjct: 160 LIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPD 219
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+ A + P V NT S N++ EK F
Sbjct: 220 GCTMASLM---------------------------PAVANT-----SSENVL-YVEKIFV 246
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+E K+LISWN I + + + ++ +M V PD TFAS+L AC L+++
Sbjct: 247 NLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCR-VEPDAITFASVLPACGDLSALL 305
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G++IH ++ + +L ++ + N+L++MYA+CG + + ++F+ M R+V SW ++I+A+
Sbjct: 306 LGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYG 365
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
G +A+ LF +M +G PDS+ F+ +L+AC+H+GL+ EG YF M Y I+P I
Sbjct: 366 MTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRI 425
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH 500
EH+ CL+DLLGRAG++ EA K+ P+ + V TLLS+CR+ ++ IG A L
Sbjct: 426 EHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQ 485
Query: 501 LQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEF 560
L P + YVLLSN+YA G W +V R ++K ++K P S +E+ F +
Sbjct: 486 LAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDT 545
Query: 561 SHSKIGEI 568
SH + EI
Sbjct: 546 SHPQSKEI 553
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 195/433 (45%), Gaps = 60/433 (13%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L CS ++ L+ G+ +H VLK+G+ ++ V N ++ +Y KCG + AR+VFDEM ++
Sbjct: 125 VLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKD 184
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHA 124
+VSW++M++G+ ALE +M P+ AS + A A S
Sbjct: 185 VVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSS--------- 235
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
++ +V +++ K NL+S+N +I +++N P +
Sbjct: 236 -------ENVLYVEKIFVNLERK-----------------NLISWNVMIRVYMKNSLPTQ 271
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
+++ M + + PD +FA L C + L G +H K KL N + N+++
Sbjct: 272 AVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLID 331
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y++ + +A++ F ++ +D+ SW + I+A +++F EM N G PD
Sbjct: 332 MYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNS-GQAPDSI 390
Query: 305 TFASILAACAGLASVQHGKQIHAHLI-RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
F +IL+AC+ + G+ + R+ + LV++ + G + +Y + +
Sbjct: 391 AFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQ 450
Query: 364 M-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
M + N W T++ S+ ++F M IG+L A N L E
Sbjct: 451 MPIEPNERVWATLL----------SSCRVFTNMD-----------IGILAADNLLQLAPE 489
Query: 423 GEAYFNSMEKTYG 435
Y+ + Y
Sbjct: 490 QSGYYVLLSNIYA 502
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 162/315 (51%), Gaps = 12/315 (3%)
Query: 216 DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIA 275
D++ LH + NP +G +M Y+ G K F + +++++ +N I
Sbjct: 33 DIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIR 92
Query: 276 ACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLN 335
+ + Y+ GL VF+EM N G RPD++T+ +L AC+ ++++G IH ++++ L+
Sbjct: 93 SYVNNHRYDDGLLVFREMVNG-GFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLD 151
Query: 336 QDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM 395
++ VGN L+ MY KCG + + ++F+EM+ ++VVSWN+++A +A++ AL++ +M
Sbjct: 152 FNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREM 211
Query: 396 KATGIKPDSVTFIGLLTACNHAGL--VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 453
+ G KPD T L+ A + V E F ++E+ IS ++ + + L
Sbjct: 212 EDYGQKPDGCTMASLMPAVANTSSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQ 271
Query: 454 GKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLS 513
L + +K + D I ++L AC +++G R+ + +++ P +LL
Sbjct: 272 AVDLYLQ--MEKCRVEPDAITFASVLPACGDLSALLLGRRIHE---YVEKKKLCPNLLLE 326
Query: 514 N----LYASDGMWGD 524
N +YA G D
Sbjct: 327 NSLIDMYARCGCLDD 341
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +S+L C AL G +H V K + P++++ N ++++YA+CG + A++VFD
Sbjct: 288 AITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFD 347
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
M R++ SW+++IS + G+ A+ F++M P+ F + +SAC+
Sbjct: 348 RMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACS 400
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 166/479 (34%), Positives = 275/479 (57%), Gaps = 3/479 (0%)
Query: 101 YIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGE 160
+ + + ++AC ++L +GQ++HA+ +K Y +++ L+ Y K DA V E
Sbjct: 52 HCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDE 111
Query: 161 AFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKG 220
E N+VS+ A+I+ + + + VF M+R P+ F+FA L C ++ L G
Sbjct: 112 MPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALG 171
Query: 221 MILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHC 280
+H L VK +S+ FVG++++ +Y+K I EA + F + E+D++S IA +
Sbjct: 172 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQL 231
Query: 281 ADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV 340
E+ L +F+ + ++ G+RP+ T+AS+L A +GLA + HGKQ H H++R L +
Sbjct: 232 GLDEEALEMFQRLQSE-GMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVL 290
Query: 341 GNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK-ATG 399
N+L++MY+KCG +S + +LF+ M R +SWN ++ ++ H LG L+LF M+
Sbjct: 291 QNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKR 350
Query: 400 IKPDSVTFIGLLTACNHAGLVKEGEAYFNSM-EKTYGISPDIEHFTCLIDLLGRAGKLLE 458
+KPD+VT + +L+ C+H + G + ++ M YGI PD EH+ C++D+LGRAG++ E
Sbjct: 351 VKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDE 410
Query: 459 AEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYAS 518
A E+ K+ P VLG+LL ACR+ V IGE + +L ++P YV+LSNLYAS
Sbjct: 411 AFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYAS 470
Query: 519 DGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
G W DV R M+ + KEP S I+ + T F + +H + E+ +K +S+
Sbjct: 471 AGRWEDVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISI 529
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 187/364 (51%), Gaps = 5/364 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+LL+ C +AL++G +HA ++K P + +L Y KC + ARKV DEM E
Sbjct: 55 DALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPE 114
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQI 122
+N+VSW+AMIS + Q G AL F++M PNE+ FA+ +++C L G+QI
Sbjct: 115 KNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQI 174
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H +K+ Y S FVG+SL+ MY K G +A ++ E ++VS A+IAG+ +
Sbjct: 175 HGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLD 234
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
E+ E+F+ + +G+ P+ ++A L S L G HC ++ +L + N++
Sbjct: 235 EEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSL 294
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +YSK + A++ F + E+ ISWN + S + L +F+ M ++ V+PD
Sbjct: 295 IDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPD 354
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLI--RMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
T ++L+ C+ G I+ ++ + D +V+M + G I +++
Sbjct: 355 AVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEF 414
Query: 361 FNEM 364
M
Sbjct: 415 IKRM 418
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 183/418 (43%), Gaps = 47/418 (11%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +++L C + L G +H ++K + V + +L++YAK G++ AR++F+ +
Sbjct: 154 TFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECL 213
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
ER++VS +A+I+G+ Q G ALE F ++ + PN +AS ++A +G+ L G+
Sbjct: 214 PERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGK 273
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q H + L+ + + NSLI MY K G S A ++ E +S+NA++ G+ ++
Sbjct: 274 QAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHG 333
Query: 181 QPEKGFEVFKLMLRQGLL-PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ E+F+LM + + PD + L CS K+E
Sbjct: 334 LGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHG----------------KME------ 371
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+T +++Y + GE + D + + ++ K M +
Sbjct: 372 DTGLSIYDGM-VAGEYGI------KPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPS---- 420
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+P S+L AC SV G+ + LI + ++ G L N+YA G
Sbjct: 421 KPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIE-PENAGNYVILSNLYASAGRWEDVNN 479
Query: 360 LFNEMLHRNVV-----SW----NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFI 408
+ M+ + V SW T+ HAN R ++ +MK IK ++
Sbjct: 480 VRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYV 537
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 195/652 (29%), Positives = 327/652 (50%), Gaps = 84/652 (12%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+ LL CSK+ QQ +H+ ++ G ++ V+++YA G + A++VF E+S
Sbjct: 38 NDLLQQCSKSHLSQQ---IHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVF-EVSP 93
Query: 66 ----RNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVK 118
NL+ W++++ + G ALE + +M L + + F I ACA + S
Sbjct: 94 IECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKL 153
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+ +H + ++ G+ VGN L+ MY K+G DA V+ + VS+N +++G+
Sbjct: 154 CRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYAL 213
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE----------------------------- 209
N E+F++M GL P+ ++ L
Sbjct: 214 NYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEA 273
Query: 210 ---ICSVSNDL---RKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIE 263
+ SVS DL +G ++H VK E+ FV N+++ LY K + A F I+
Sbjct: 274 LAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIK 333
Query: 264 EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG---VRPD------------------ 302
K+++SWN I++ + ++ ++F ++ VRP+
Sbjct: 334 TKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGE 393
Query: 303 -----------------DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALV 345
T AS+L+ CA LA++ G++IH H++R ++ ++ VGN L+
Sbjct: 394 EALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLI 453
Query: 346 NMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV 405
NMY K G +F ++ +++++SWNT++A + H LG +A++ F+QM G +PD V
Sbjct: 454 NMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGV 513
Query: 406 TFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKK 465
TF+ +L+AC+HAGLV EG F+ M K + + P +EH+ C++DLLGRAG L EA + K
Sbjct: 514 TFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKS 573
Query: 466 FPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDV 525
P+ + V G LL++CR+ ++ + E A Q+F+L Y+LLSN+YA+ G W D
Sbjct: 574 MPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDS 633
Query: 526 AGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
A R K GLKK P S I+V+ F+ H+++ E+ +LK L L
Sbjct: 634 AKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDLGL 685
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 139/320 (43%), Gaps = 44/320 (13%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A++++ +L A +G +H V+K G + + V N ++ LY K G + AR +F
Sbjct: 271 AEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFL 330
Query: 62 EMSERNLVSWSAMIS---------------------------------------GHHQAG 82
E+ +N+VSW+A+IS G G
Sbjct: 331 EIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKG 390
Query: 83 EHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
+ ALE F +M L N AS +S CA + +L G++IH + ++ VGN
Sbjct: 391 QGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGN 450
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
LI+MY K G + LV+ + +L+S+N ++AG+ + E F M++ G P
Sbjct: 451 GLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEP 510
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVK-CKLESNPFVGNTIMALYSKFNLIGEAEKA 258
D +F L CS + + +G L +K ++E ++ L + L+ EA K
Sbjct: 511 DGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKV 570
Query: 259 FRLIE-EKDLISWNTFIAAC 277
+ + E + W + +C
Sbjct: 571 VKSMPVEPNACVWGALLNSC 590
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 183/558 (32%), Positives = 301/558 (53%), Gaps = 19/558 (3%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G+ +H AVLK DV V+N ++ +YAKCG+M A +VF+ M R+ VSW+ ++SG Q
Sbjct: 267 GMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQ 326
Query: 81 AGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
+ AL +F M P++ + I+A +L+KG+++HAY+++ G S +
Sbjct: 327 NELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQI 386
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFE----PNLVSFNALIAGFVENQQPEKGFEVFKLML 193
GN+L+ MY K + G AFE +L+S+ +IAG+ +N+ + +F+ +
Sbjct: 387 GNTLVDMYAKCC----CVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQ 442
Query: 194 RQGLLPDRFSFAGGLEICS---VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN 250
+G+ D L CS N +R+ +H K L ++ + N I+ +Y +
Sbjct: 443 VKGMDVDPMMIGSVLRACSGLKSRNFIRE---IHGYVFKRDL-ADIMLQNAIVNVYGEVG 498
Query: 251 LIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
I A +AF I KD++SW + I C H + L +F + + ++PD S L
Sbjct: 499 HIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTN-IQPDSIAIISAL 557
Query: 311 AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVV 370
+A A L+S++ GK+IH LIR + + ++LV+MYA CG + S K+F+ + R+++
Sbjct: 558 SATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLI 617
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSM 430
W ++I A+ H G A+ LF++M + PD +TF+ LL AC+H+GL+ EG+ +F M
Sbjct: 618 LWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIM 677
Query: 431 EKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVI 490
+ Y + P EH+ C++DLL R+ L EA + + P+ + LL AC + + +
Sbjct: 678 KYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKEL 737
Query: 491 GERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQG 550
GE AK+L + Y L+SN++A+DG W DV R +K +GLKK P S IEV
Sbjct: 738 GELAAKELLQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDN 797
Query: 551 TFEKFTVAEFSHSKIGEI 568
F + SH + +I
Sbjct: 798 KIHTFMARDKSHPQTDDI 815
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 161/568 (28%), Positives = 277/568 (48%), Gaps = 50/568 (8%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S LL C KAL QG LHA +LK + ++ ++ +Y KCG + A KVFDEMSE
Sbjct: 50 SLLLDLCVAAKALPQGQQLHALLLKSHLS--AFLATKLVLMYGKCGSLRDAVKVFDEMSE 107
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQQI 122
R + SW+A++ +G++L A+E + M +L + F S + AC + G +I
Sbjct: 108 RTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEI 167
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF--EPNLVSFNALIAGFVENQ 180
H ++K GY FV N+LI+MY K G A +++ + + VS+N++I+ V
Sbjct: 168 HGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEG 227
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ +F+ M G+ + ++F L+ + ++ GM +H +K ++ +V N
Sbjct: 228 NCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVAN 287
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++A+Y+K + +A + F + +D +SWNT ++ Y L+ F++M N G +
Sbjct: 288 ALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNS-GQK 346
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD + +++AA ++ GK++HA+ IR L+ ++ +GN LV+MYAKC +
Sbjct: 347 PDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHA 406
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN---HA 417
F M ++++SW TIIA +A + A+ LF +++ G+ D + +L AC+
Sbjct: 407 FECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSR 466
Query: 418 GLVKEGEAYF-----------NSMEKTYG---------------ISPDIEHFTCLIDLLG 451
++E Y N++ YG S DI +T +I
Sbjct: 467 NFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCV 526
Query: 452 RAGKLLEAEE--YT-KKFPLGQDPIVLGTLLSAC----RLRRDVVIGERLAKQLFHLQPT 504
G +EA E Y+ K+ + D I + + LSA L++ I L ++ F L+
Sbjct: 527 HNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGP 586
Query: 505 TTSPYVLLSNLYASDGMWGDVAGARKML 532
S V ++YA G V +RKM
Sbjct: 587 IASSLV---DMYAC---CGTVENSRKMF 608
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 132/428 (30%), Positives = 220/428 (51%), Gaps = 7/428 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + S+L C + G +H +K G V V N ++ +Y KCG + AR +FD
Sbjct: 145 ACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFD 204
Query: 62 E--MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSL 116
M + + VSW+++IS H G L AL F +M + N Y F +A+ +
Sbjct: 205 GIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFV 264
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G IH LK + + +V N+LI+MY K G DA V+ + VS+N L++G
Sbjct: 265 KLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGL 324
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP 236
V+N+ F+ M G PD+ S + S +L KG +H ++ L+SN
Sbjct: 325 VQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNM 384
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
+GNT++ +Y+K + AF + EKDLISW T IA + + + +++F+++
Sbjct: 385 QIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVK 444
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
G+ D S+L AC+GL S ++IH ++ + L D+ + NA+VN+Y + G I
Sbjct: 445 -GMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHIDY 502
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ + F + +++VSW ++I ++ L AL+LF +K T I+PDS+ I L+A +
Sbjct: 503 ARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATAN 562
Query: 417 AGLVKEGE 424
+K+G+
Sbjct: 563 LSSLKKGK 570
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 76/131 (58%), Gaps = 4/131 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I S L + +L++G +H +++ G + +++ ++++YA CG + +RK+F +
Sbjct: 552 AIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSV 611
Query: 64 SERNLVSWSAMI--SGHHQAGEHLLAL-EFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
+R+L+ W++MI +G H G +AL + + +++P+ F + + AC+ +V+G+
Sbjct: 612 KQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGK 671
Query: 121 QIHAYSLKFGY 131
+ +K+GY
Sbjct: 672 RFFEI-MKYGY 681
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 183/558 (32%), Positives = 293/558 (52%), Gaps = 49/558 (8%)
Query: 22 ISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQA 81
+SL + + D + N +L Y + G++ AR +F+ +E +++SW+A++SG+ Q
Sbjct: 22 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQW 81
Query: 82 GEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS--FVGN 139
G+ A E F +M P + + I + +G + A L F A + F
Sbjct: 82 GKMSEARELFDRM---PGRDVVSWNIMVSGYAR---RGDMVEARRL-FDAAPVRDVFTWT 134
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
+++S Y + G +A V+ E N VS+NA++A +++ + ++ E+F +M
Sbjct: 135 AVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM------- 187
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
C+ N NT++ Y++ ++ EA+ F
Sbjct: 188 -----------------------------PCR---NVASWNTMLTGYAQAGMLEEAKAVF 215
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+ +KD +SW +AA S E+ L +F EM G + FA +L+ CA +A++
Sbjct: 216 DTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGR-CGEWVNRSAFACVLSTCADIAAL 274
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
+ G Q+H LIR VGNAL+ MY KCG + + F EM R+VVSWNT+IA +
Sbjct: 275 ECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGY 334
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
A H G AL++F+ M+ T KPD +T +G+L AC+H+GLV++G +YF SM +G++
Sbjct: 335 ARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAK 394
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLF 499
EH+TC+IDLLGRAG+L EA + K P D + G LL A R+ R+ +G A+++F
Sbjct: 395 PEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIF 454
Query: 500 HLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAE 559
L+P YVLLSN+YAS G W D R M+++ G+KK P +S IEVQ F+ +
Sbjct: 455 ELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGD 514
Query: 560 FSHSKIGEINYMLKTLSL 577
H + +I L+ L +
Sbjct: 515 CVHPEKEKIYAFLEDLDM 532
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 7/188 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + +L C+ AL+ G+ LH +++ G V N +L +Y KCG M AR F+EM
Sbjct: 260 AFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEM 319
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
ER++VSW+ MI+G+ + G ALE F M P++ ++AC+ LV+
Sbjct: 320 EERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSH-SGLVEKG 378
Query: 121 QIHAYSL--KFGYASISFVGNSLISMYMKVGYSSDA-LLVYGEAFEPNLVSFNALIAGFV 177
+ YS+ FG + +I + + G ++A L+ FEP+ + AL+
Sbjct: 379 ISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASR 438
Query: 178 ENQQPEKG 185
++ PE G
Sbjct: 439 IHRNPELG 446
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 15/156 (9%)
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
R+ V++N +I++HANH L A F+ + D+V++ G+L A G V+E
Sbjct: 4 RDSVTYNVMISSHANHGLVSLARHYFD----LAPEKDAVSWNGMLAAYVRNGRVEEARGL 59
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRR 486
FNS + D+ + L+ + GK+ EA E + P G+D + ++S R
Sbjct: 60 FNSRTEW-----DVISWNALMSGYVQWGKMSEARELFDRMP-GRDVVSWNIMVSGYARRG 113
Query: 487 DVVIGERLAKQLFHLQPTTTS-PYVLLSNLYASDGM 521
D+V A++LF P + + + YA +GM
Sbjct: 114 DMV----EARRLFDAAPVRDVFTWTAVVSGYAQNGM 145
>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
Length = 856
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 194/590 (32%), Positives = 319/590 (54%), Gaps = 23/590 (3%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGI--QPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+ ++ H + A++ G HA LK G+ N +L++YA+ G + A+++F
Sbjct: 171 LRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAG 230
Query: 63 MS--ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLV 117
+ ++V+W+ M+S Q+G A++ M L P+ FASA+ AC+ ++ L
Sbjct: 231 ATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLD 290
Query: 118 KGQQIHAYSLKFG-YASISFVGNSLISMYM---KVGYSSDALLVYGEAFEPNLVSFNALI 173
G+++HAY +K A+ SFV ++L+ MY +VG + + ++ + L +NA+I
Sbjct: 291 VGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGK-QLGMWNAMI 349
Query: 174 AGFVENQQPEKGFEVFKLM-LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
G+ + E+ +F M G +P + A L C+ S +H VK +
Sbjct: 350 CGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGM 409
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC---SHCADYEKGLSV 289
N FV N +M +Y++ A + F +++ D++SWNT I C H AD +
Sbjct: 410 AGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVAD---AFQL 466
Query: 290 FKEMSN--DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNM 347
+EM + GV P+ T ++L CA LA+ GK+IH + +R L+ DV VG+ALV+M
Sbjct: 467 AREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDM 526
Query: 348 YAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG-IKPDSVT 406
YAKCG ++ S +F+ + RN ++WN +I A+ H LGG A LF++M A+G +P+ VT
Sbjct: 527 YAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVT 586
Query: 407 FIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
F+ L AC+H+G+V G F++ME+ +G+ P + C++D+LGRAG+L EA
Sbjct: 587 FMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSM 646
Query: 467 PLGQDPI-VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDV 525
G+ + T+L ACRL R+V +GE ++L L+P S YVLL N+Y++ G W
Sbjct: 647 ETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRA 706
Query: 526 AGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
A R ++ G+ KEP S IEV G +F E +H E++ ++ L
Sbjct: 707 AEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEAL 756
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 229/466 (49%), Gaps = 22/466 (4%)
Query: 23 SLHAAVLKMGI--QPDVIVSNHVLNLYAKCGKMILARKVFDEMSE--RNLVSWSAMISG- 77
++HAA L+ G+ +P V+N +L YA+CG++ A +VF +S+ + VS++++IS
Sbjct: 80 AIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISAL 139
Query: 78 -HHQAGEHLLALEFFSQMHLLP-NEYIFASAISAC----AGIQSLVKGQQIHAYSLKFG- 130
+ +H LA P + S + A A ++ G++ HA++LK G
Sbjct: 140 CLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGL 199
Query: 131 -YASISFVGNSLISMYMKVGYSSDALLVYGEAF--EPNLVSFNALIAGFVENQQPEKGFE 187
+ F N+L+SMY ++G +DA ++ A ++V++N +++ V++ ++ +
Sbjct: 200 LHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQ 259
Query: 188 VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK-CKLESNPFVGNTIMALY 246
M+ G+ PD +FA L CS L G +H +K +L +N FV + ++ +Y
Sbjct: 260 TLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMY 319
Query: 247 SKFNLIGEAEKAFRLIEE--KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+ +G+A + F ++ + K L WN I + E+ L +F M + G P +
Sbjct: 320 ATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCET 379
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T AS+L ACA + + +H ++++ + + V NAL++MYA+ G + ++F +
Sbjct: 380 TMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMV 439
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKL---FEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+VVSWNT+I A +L +Q++ G+ P+++T + LL C
Sbjct: 440 DLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPA 499
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
G+ + + + D+ + L+D+ + G L + + P
Sbjct: 500 RGK-EIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLP 544
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 197/399 (49%), Gaps = 25/399 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+ +S L CS+ + L G +HA V+K + + V++ ++++YA ++ AR+VFD
Sbjct: 275 TFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDM 334
Query: 63 M--SERNLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSL 116
+ S + L W+AMI G+ QAG AL F++M +P E AS + ACA ++
Sbjct: 335 VPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAF 394
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
+ +H Y +K G A FV N+L+ MY ++G + A ++ P++VS+N LI G
Sbjct: 395 AGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGC 454
Query: 177 VENQQPEKGFEVFKLMLR---QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE 233
V F++ + M + G++P+ + L C++ +G +H V+ L+
Sbjct: 455 VVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALD 514
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
++ VG+ ++ +Y+K + + F + ++ I+WN I A + +F M
Sbjct: 515 TDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRM 574
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQI-HAHLIRMRLNQDVGVGNA------LVN 346
+ RP++ TF + LAAC+ V G Q+ HA + +D GV +V+
Sbjct: 575 TASGEARPNEVTFMAALAACSHSGMVDRGLQLFHA------MERDHGVEPTPDILACVVD 628
Query: 347 MYAKCGLISCSYKLFNEML--HRNVVSWNTIIAAHANHR 383
+ + G + +Y + M + V +W+T++ A HR
Sbjct: 629 ILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHR 667
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++ +LL C+ A +G +H ++ + DV V + ++++YAKCG + L+R VFD
Sbjct: 482 AITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFD 541
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLV 117
+ RN ++W+ +I + G A F +M PNE F +A++AC+ +
Sbjct: 542 RLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVD 601
Query: 118 KGQQI-HAYSLKFGYASISFVGNSLISMYMKVGYSSDA 154
+G Q+ HA G + ++ + + G +A
Sbjct: 602 RGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEA 639
>gi|357481329|ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512285|gb|AES93908.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 831
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 174/544 (31%), Positives = 296/544 (54%), Gaps = 42/544 (7%)
Query: 12 CSKTKALQ---QGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
C ++ L QG +H +K G + D+ + N +L++YAK G M A VF+ + + ++
Sbjct: 258 CDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSV 317
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAY 125
VSW+ MISG+ + ALE F +M P++ + + ++AC + G+QI
Sbjct: 318 VSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVGRQI--- 374
Query: 126 SLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKG 185
F S P+L+S+NA+++G+ ++ +
Sbjct: 375 ---FDCMS-----------------------------SPSLISWNAILSGYNQSADHGEA 402
Query: 186 FEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMAL 245
E+F+ M Q PDR + A L C+ L G +H ++ K + +V ++++ +
Sbjct: 403 VELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINV 462
Query: 246 YSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFT 305
YSK + ++ F + E D++ WN+ IA S + + L+ FK M G P +F+
Sbjct: 463 YSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQ-FGFFPSEFS 521
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
FA+I ++CA L+S+ G+QIHA +I+ +V VG++LV MY KCG + + F+ M
Sbjct: 522 FATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMP 581
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
+N+V+WN +I +A++ G A+ L++ M ++G KPD +TF+ +LTAC+H+ LV EG
Sbjct: 582 GKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEGVE 641
Query: 426 YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLR 485
F+SM + + + P ++H+TC+ID LGR G+ E E P D IV +LS+CR+
Sbjct: 642 IFSSMLQKFEVVPKLDHYTCIIDCLGRVGRFNEVEVILDTMPYKDDTIVWEVVLSSCRVH 701
Query: 486 RDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSM 545
+V + +R A++L L P ++PYVLL+N+Y+S G W D R ++ D+ + K+P YS
Sbjct: 702 ANVSLAKRAAEELHRLNPRNSAPYVLLANMYSSMGRWDDAQVVRDLMSDNQIHKDPGYSR 761
Query: 546 IEVQ 549
E +
Sbjct: 762 SEFK 765
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 231/497 (46%), Gaps = 84/497 (16%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+LL C K+L +HA + + + D + NH+++LY+KC ++ A VFD++ +
Sbjct: 10 NLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIPHK 69
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM-------------------------------- 94
N+ S++A++S ++ A F QM
Sbjct: 70 NIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMM 129
Query: 95 ---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYS 151
+ P+ FA+ SAC G++ + G++ H LK G+ S +V N+L+ MY K G +
Sbjct: 130 VYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLN 189
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
DA V+ EPN V+F ++ G + Q ++G E+F+LMLR+G+ D S + L IC
Sbjct: 190 EDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVIC 249
Query: 212 S------VSNDLR------KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
+ V +D R +G +H L VK E + + N+++ +Y+K + AE F
Sbjct: 250 AKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVF 309
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+++ ++SWN I+ + D EK L F+ M G PDD T+ ++L AC V
Sbjct: 310 ENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQC-CGYEPDDVTYINMLTACVKSGDV 368
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
+ G+QI F+ M +++SWN I++ +
Sbjct: 369 KVGRQI-----------------------------------FDCMSSPSLISWNAILSGY 393
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
G A++LF +M+ PD T +L++C GL++ G+ +++ + G D
Sbjct: 394 NQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQ-VHAVSQKLGFYDD 452
Query: 440 IEHFTCLIDLLGRAGKL 456
+ + LI++ + GK+
Sbjct: 453 VYVASSLINVYSKCGKM 469
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 207/406 (50%), Gaps = 13/406 (3%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
IS + C KAL+ + G +PD + ++L K G + + R++FD MS
Sbjct: 324 ISGYGNRCDSEKALECFQRMQCC----GYEPDDVTYINMLTACVKSGDVKVGRQIFDCMS 379
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQ 121
+L+SW+A++SG++Q+ +H A+E F +M P+ A +S+CA + L G+Q
Sbjct: 380 SPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQ 439
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+HA S K G+ +V +SLI++Y K G + V+ + E ++V +N++IAGF N
Sbjct: 440 VHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSL 499
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ FK M + G P FSFA C+ + L +G +H +K N FVG++
Sbjct: 500 EQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSS 559
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y K +G A F ++ K++++WN I +H + +S++K+M + G +P
Sbjct: 560 LVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISS-GEKP 618
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLI-RMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
DD TF ++L AC+ A V G +I + ++ + + + +++ + G + +
Sbjct: 619 DDITFVAVLTACSHSALVDEGVEIFSSMLQKFEVVPKLDHYTCIIDCLGRVGRFNEVEVI 678
Query: 361 FNEMLHR-NVVSWNTIIAA---HANHRLGGSALKLFEQMKATGIKP 402
+ M ++ + + W ++++ HAN L A + ++ P
Sbjct: 679 LDTMPYKDDTIVWEVVLSSCRVHANVSLAKRAAEELHRLNPRNSAP 724
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 197/423 (46%), Gaps = 53/423 (12%)
Query: 107 ISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNL 166
+ +C +SL + IHA +F S +F+ N LI +Y K + A V+ + N+
Sbjct: 12 LQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIPHKNI 71
Query: 167 VSFNALIAGFVEN-----------QQPEK---------------GFEVFKL------MLR 194
S+NA+++ F ++ Q PE+ G+E L M+
Sbjct: 72 FSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMMVY 131
Query: 195 QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGE 254
+ + P +FA C D+ G H L +K +SN +V N ++ +Y+K L +
Sbjct: 132 ESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNED 191
Query: 255 AEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACA 314
A + F I E + +++ T + S ++GL +F+ M G+ D + ++IL CA
Sbjct: 192 AFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLR-KGICVDSVSLSTILVICA 250
Query: 315 ------------GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
GL++ GKQIH ++ +D+ + N+L++MYAK G + + +F
Sbjct: 251 KGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFE 310
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+ +VVSWN +I+ + N AL+ F++M+ G +PD VT+I +LTAC +G VK
Sbjct: 311 NLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKV 370
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL---GQDPIVLGTLL 479
G F+ M SP + + ++ ++ EA E +K D L +L
Sbjct: 371 GRQIFDCMS-----SPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIIL 425
Query: 480 SAC 482
S+C
Sbjct: 426 SSC 428
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 147/280 (52%), Gaps = 7/280 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++ +L C++ L+ G +HA K+G DV V++ ++N+Y+KCGKM +++ VF ++
Sbjct: 420 TLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKL 479
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
SE ++V W++MI+G AL F +M P+E+ FA+ S+CA + SL +GQ
Sbjct: 480 SELDVVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQ 539
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIHA +K GY FVG+SL+ MY K G A + N+V++N +I G+ N
Sbjct: 540 QIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNG 599
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ ++K M+ G PD +F L CS S + +G+ + ++ K E P + +
Sbjct: 600 YGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQ-KFEVVPKLDH 658
Query: 241 --TIMALYSKFNLIGEAEKAFRLIEEK-DLISWNTFIAAC 277
I+ + E E + K D I W +++C
Sbjct: 659 YTCIIDCLGRVGRFNEVEVILDTMPYKDDTIVWEVVLSSC 698
>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
Length = 854
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 194/590 (32%), Positives = 319/590 (54%), Gaps = 23/590 (3%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGI--QPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+ ++ H + A++ G HA LK G+ N +L++YA+ G + A+++F
Sbjct: 169 LRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAG 228
Query: 63 MS--ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLV 117
+ ++V+W+ M+S Q+G A++ M L P+ FASA+ AC+ ++ L
Sbjct: 229 ATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLD 288
Query: 118 KGQQIHAYSLKFG-YASISFVGNSLISMYM---KVGYSSDALLVYGEAFEPNLVSFNALI 173
G+++HAY +K A+ SFV ++L+ MY +VG + + ++ + L +NA+I
Sbjct: 289 VGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGK-QLGMWNAMI 347
Query: 174 AGFVENQQPEKGFEVFKLM-LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
G+ + E+ +F M G +P + A L C+ S +H VK +
Sbjct: 348 CGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGM 407
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC---SHCADYEKGLSV 289
N FV N +M +Y++ A + F +++ D++SWNT I C H AD +
Sbjct: 408 AGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVAD---AFQL 464
Query: 290 FKEMSN--DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNM 347
+EM + GV P+ T ++L CA LA+ GK+IH + +R L+ DV VG+ALV+M
Sbjct: 465 AREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDM 524
Query: 348 YAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG-IKPDSVT 406
YAKCG ++ S +F+ + RN ++WN +I A+ H LGG A LF++M A+G +P+ VT
Sbjct: 525 YAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVT 584
Query: 407 FIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
F+ L AC+H+G+V G F++ME+ +G+ P + C++D+LGRAG+L EA
Sbjct: 585 FMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSM 644
Query: 467 PLGQDPI-VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDV 525
G+ + T+L ACRL R+V +GE ++L L+P S YVLL N+Y++ G W
Sbjct: 645 ETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRA 704
Query: 526 AGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
A R ++ G+ KEP S IEV G +F E +H E++ ++ L
Sbjct: 705 AEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEAL 754
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 229/466 (49%), Gaps = 22/466 (4%)
Query: 23 SLHAAVLKMGI--QPDVIVSNHVLNLYAKCGKMILARKVFDEMSE--RNLVSWSAMISG- 77
++HAA L+ G+ +P V+N +L YA+CG++ A +VF +S+ + VS++++IS
Sbjct: 78 AIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISAL 137
Query: 78 -HHQAGEHLLALEFFSQMHLLP-NEYIFASAISAC----AGIQSLVKGQQIHAYSLKFG- 130
+ +H LA P + S + A A ++ G++ HA++LK G
Sbjct: 138 CLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGL 197
Query: 131 -YASISFVGNSLISMYMKVGYSSDALLVYGEAF--EPNLVSFNALIAGFVENQQPEKGFE 187
+ F N+L+SMY ++G +DA ++ A ++V++N +++ V++ ++ +
Sbjct: 198 LHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQ 257
Query: 188 VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK-CKLESNPFVGNTIMALY 246
M+ G+ PD +FA L CS L G +H +K +L +N FV + ++ +Y
Sbjct: 258 TLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMY 317
Query: 247 SKFNLIGEAEKAFRLIEE--KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+ +G+A + F ++ + K L WN I + E+ L +F M + G P +
Sbjct: 318 ATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCET 377
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T AS+L ACA + + +H ++++ + + V NAL++MYA+ G + ++F +
Sbjct: 378 TMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMV 437
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKL---FEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+VVSWNT+I A +L +Q++ G+ P+++T + LL C
Sbjct: 438 DLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPA 497
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
G+ + + + D+ + L+D+ + G L + + P
Sbjct: 498 RGK-EIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLP 542
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 197/399 (49%), Gaps = 25/399 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+ +S L CS+ + L G +HA V+K + + V++ ++++YA ++ AR+VFD
Sbjct: 273 TFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDM 332
Query: 63 M--SERNLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSL 116
+ S + L W+AMI G+ QAG AL F++M +P E AS + ACA ++
Sbjct: 333 VPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAF 392
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
+ +H Y +K G A FV N+L+ MY ++G + A ++ P++VS+N LI G
Sbjct: 393 AGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGC 452
Query: 177 VENQQPEKGFEVFKLMLR---QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE 233
V F++ + M + G++P+ + L C++ +G +H V+ L+
Sbjct: 453 VVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALD 512
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
++ VG+ ++ +Y+K + + F + ++ I+WN I A + +F M
Sbjct: 513 TDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRM 572
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQI-HAHLIRMRLNQDVGVGNA------LVN 346
+ RP++ TF + LAAC+ V G Q+ HA + +D GV +V+
Sbjct: 573 TASGEARPNEVTFMAALAACSHSGMVDRGLQLFHA------MERDHGVEPTPDILACVVD 626
Query: 347 MYAKCGLISCSYKLFNEML--HRNVVSWNTIIAAHANHR 383
+ + G + +Y + M + V +W+T++ A HR
Sbjct: 627 ILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHR 665
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++ +LL C+ A +G +H ++ + DV V + ++++YAKCG + L+R VFD
Sbjct: 480 AITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFD 539
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLV 117
+ RN ++W+ +I + G A F +M PNE F +A++AC+ +
Sbjct: 540 RLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVD 599
Query: 118 KGQQI-HAYSLKFGYASISFVGNSLISMYMKVGYSSDA 154
+G Q+ HA G + ++ + + G +A
Sbjct: 600 RGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEA 637
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 179/562 (31%), Positives = 296/562 (52%), Gaps = 14/562 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
SLL C+ TK+LQQ +H ++ I N +L+ + A +F ++
Sbjct: 36 SLLKQCTSTKSLQQ---IHTQMIINAIHK----PNFLLHRFIDLKDFNNASLLFSQIPYP 88
Query: 67 NLVSWSAMISGHHQAGEHL-LALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
N +++ MI G + L +EF+ QM + PN + + ACA + L GQ
Sbjct: 89 NEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCA 148
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H+ LK G + V +SLI+MY + G A V+ E E +LVS+N++I+G+
Sbjct: 149 HSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYA 208
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
+F M G PD + L C DL G + V+ +++ N FVG+ +
Sbjct: 209 GDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSAL 268
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y K + A + F + +KD+++WN I + ++ + +F M + GV PD
Sbjct: 269 IGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGM-RESGVNPD 327
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
T +L+ACA + ++ GK + + L D+ V AL++MYAKCG + + ++F
Sbjct: 328 KITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFE 387
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG--IKPDSVTFIGLLTACNHAGLV 420
+M +N VSWN +I+A A H +L LF++M G ++P+ ++FIG+L+AC HAGLV
Sbjct: 388 DMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLV 447
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG F+ M ++G+ P IEH +C++DLL RAG + EA ++ +K P D +VLG LL
Sbjct: 448 DEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLG 507
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC+ RR+V + ER+ L ++P + Y++ S ++A+ W D A R +++ G+ K
Sbjct: 508 ACQKRRNVDVSERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVTKT 567
Query: 541 PSYSMIEVQGTFEKFTVAEFSH 562
P S IE++ +F + H
Sbjct: 568 PGCSWIEIENQVHEFHAGDVLH 589
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 202/604 (33%), Positives = 305/604 (50%), Gaps = 76/604 (12%)
Query: 48 AKCGKMILARKVFDEM--SERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEY 101
A G++ A FD + + R+ V +AM+S +A A+ F + L P++Y
Sbjct: 103 AAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDY 162
Query: 102 IFASAISACAGIQSLVKGQ--QIHAYSLKFGYASISFVGNSLISMYMK------------ 147
F + ISA + +L Q+H LK G A++ V N+LI++YMK
Sbjct: 163 SFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARK 222
Query: 148 -----------------VGY-----SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKG 185
VGY + A V+ E V +NA+I+G+V++
Sbjct: 223 VLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADA 282
Query: 186 FEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP----FVGNT 241
FE+F+ M+ + + D F+F L C+ + G +H ++ + P V N
Sbjct: 283 FELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNA 342
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS--ND--- 296
++ LYSK I A++ F + KD++SWNT ++ +K + VFK M ND
Sbjct: 343 LVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSW 402
Query: 297 --------HG-----------------VRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
HG V+P D+T+A +AAC L +++HG+Q+HAHL++
Sbjct: 403 MVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQ 462
Query: 332 MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
GNAL+ MYAKCG ++ + +F M + + VSWN +I+A H G AL+L
Sbjct: 463 CGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALEL 522
Query: 392 FEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLG 451
F+QM A GI PD ++F+ +LTACNHAGLV EG YF SM++ +GISP +H+ LIDLLG
Sbjct: 523 FDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLG 582
Query: 452 RAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVL 511
R+G++ EA + K P P + +LS CR D+ G A QLF + P Y+L
Sbjct: 583 RSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYIL 642
Query: 512 LSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYM 571
LSN Y++ G W D A RK+++D G+KKEP S IEV F V + H + E+
Sbjct: 643 LSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQF 702
Query: 572 LKTL 575
L+ +
Sbjct: 703 LEVI 706
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 183/433 (42%), Gaps = 85/433 (19%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKC--------------------------------- 50
LH +VLK G + VSN ++ LY KC
Sbjct: 185 LHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVR 244
Query: 51 -GKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM--HLLP-NEYIFASA 106
G + AR VF+E+ + V W+AMISG+ Q+G A E F +M +P +E+ F S
Sbjct: 245 RGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSV 304
Query: 107 ISACAGIQSLVKGQQIHAYSLK----FGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+SACA V G+ +H ++ F + V N+L+++Y K G A ++
Sbjct: 305 LSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMN 364
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL------------------------ 198
++VS+N +++G++++ +K EVFK+M + L
Sbjct: 365 LKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQ 424
Query: 199 -------PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
P +++AG + C L+ G LH V+C E++ GN ++ +Y+K
Sbjct: 425 MRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGA 484
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ +A F ++ D +SWN I+A + L +F +M + G+ PD +F +IL
Sbjct: 485 VNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAE-GIDPDRISFLTILT 543
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNA------LVNMYAKCGLISCSYKLFNEML 365
AC V G + R D G+ L+++ + G I + L M
Sbjct: 544 ACNHAGLVDEGFHYFESMKR-----DFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMP 598
Query: 366 HRNVVS-WNTIIA 377
S W I++
Sbjct: 599 FEPTPSIWEAILS 611
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 164/329 (49%), Gaps = 52/329 (15%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVI------VSNHVLNLYAKCGKMILAR 57
+ +S+L C+ G S+H ++++ QP+ + V+N ++ LY+K GK+++A+
Sbjct: 300 TFTSVLSACANAGFFVHGKSVHGQIIRL--QPNFVPEAALPVNNALVTLYSKGGKIVIAK 357
Query: 58 KVFDEMSERNLVSWSA-------------------------------MISGHHQAGEHLL 86
++FD M+ +++VSW+ M+SG+ G
Sbjct: 358 RIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSED 417
Query: 87 ALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLIS 143
AL+ F+QM + P +Y +A AI+AC + +L G+Q+HA+ ++ G+ + + GN+L++
Sbjct: 418 ALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLT 477
Query: 144 MYMKVGYSSDALLVYGEAFEPNL--VSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDR 201
MY K G +DA LV+ PNL VS+NA+I+ ++ + E+F M+ +G+ PDR
Sbjct: 478 MYAKCGAVNDARLVF--LVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDR 535
Query: 202 FSFAGGLEICSVSNDLRKGMILHCL-TVKCKLESNPFVGN--TIMALYSKFNLIGEAEKA 258
SF L C+ + + +G H ++K +P + ++ L + IGEA
Sbjct: 536 ISFLTILTACNHAGLVDEG--FHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDL 593
Query: 259 FRLIEEKDLIS-WNTFIAACSHCADYEKG 286
+ + + S W ++ C D E G
Sbjct: 594 IKTMPFEPTPSIWEAILSGCRTNGDMEFG 622
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 13/208 (6%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C + AL+ G LHA +++ G + N +L +YAKCG + AR VF M + VSW
Sbjct: 444 CGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSW 503
Query: 72 SAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG-QQIHAYSL 127
+AMIS Q G ALE F QM + P+ F + ++AC + +G +
Sbjct: 504 NAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKR 563
Query: 128 KFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
FG + LI + + G +A L+ FEP + A+++G N E G
Sbjct: 564 DFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGA 623
Query: 187 ----EVFKLMLRQG----LLPDRFSFAG 206
++F+++ + LL + +S AG
Sbjct: 624 YAADQLFRMIPQHDGTYILLSNTYSAAG 651
>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
Length = 854
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 194/590 (32%), Positives = 319/590 (54%), Gaps = 23/590 (3%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGI--QPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+ ++ H + A++ G HA LK G+ N +L++YA+ G + A+++F
Sbjct: 169 LRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAG 228
Query: 63 MS--ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLV 117
+ ++V+W+ M+S Q+G A++ M L P+ FASA+ AC+ ++ L
Sbjct: 229 ATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLD 288
Query: 118 KGQQIHAYSLKFG-YASISFVGNSLISMYM---KVGYSSDALLVYGEAFEPNLVSFNALI 173
G+++HAY +K A+ SFV ++L+ MY +VG + + ++ + L +NA+I
Sbjct: 289 VGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGK-QLGMWNAMI 347
Query: 174 AGFVENQQPEKGFEVFKLM-LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
G+ + E+ +F M G +P + A L C+ S +H VK +
Sbjct: 348 CGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGM 407
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC---SHCADYEKGLSV 289
N FV N +M +Y++ A + F +++ D++SWNT I C H AD +
Sbjct: 408 AGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVAD---AFQL 464
Query: 290 FKEMSN--DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNM 347
+EM + GV P+ T ++L CA LA+ GK+IH + +R L+ DV VG+ALV+M
Sbjct: 465 AREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDM 524
Query: 348 YAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG-IKPDSVT 406
YAKCG ++ S +F+ + RN ++WN +I A+ H LGG A LF++M A+G +P+ VT
Sbjct: 525 YAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVT 584
Query: 407 FIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
F+ L AC+H+G+V G F++ME+ +G+ P + C++D+LGRAG+L EA
Sbjct: 585 FMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSM 644
Query: 467 PLGQDPI-VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDV 525
G+ + T+L ACRL R+V +GE ++L L+P S YVLL N+Y++ G W
Sbjct: 645 EAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRA 704
Query: 526 AGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
A R ++ G+ KEP S IEV G +F E +H E++ ++ L
Sbjct: 705 AEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEAL 754
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 229/466 (49%), Gaps = 22/466 (4%)
Query: 23 SLHAAVLKMGI--QPDVIVSNHVLNLYAKCGKMILARKVFDEMSE--RNLVSWSAMISG- 77
++HAA L+ G+ +P V+N +L YA+CG++ A +VF +S+ + VS++++IS
Sbjct: 78 AIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISAL 137
Query: 78 -HHQAGEHLLALEFFSQMHLLP-NEYIFASAISAC----AGIQSLVKGQQIHAYSLKFG- 130
+ +H LA P + S + A A ++ G++ HA++LK G
Sbjct: 138 CLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGL 197
Query: 131 -YASISFVGNSLISMYMKVGYSSDALLVYGEAF--EPNLVSFNALIAGFVENQQPEKGFE 187
+ F N+L+SMY ++G +DA ++ A ++V++N +++ V++ ++ +
Sbjct: 198 LHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQ 257
Query: 188 VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK-CKLESNPFVGNTIMALY 246
M+ G+ PD +FA L CS L G +H +K +L +N FV + ++ +Y
Sbjct: 258 TLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMY 317
Query: 247 SKFNLIGEAEKAFRLIEE--KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+ +G+A + F ++ + K L WN I + E+ L +F M + G P +
Sbjct: 318 ATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCET 377
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T AS+L ACA + + +H ++++ + + V NAL++MYA+ G + ++F +
Sbjct: 378 TMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMV 437
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKL---FEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+VVSWNT+I A +L +Q++ G+ P+++T + LL C
Sbjct: 438 DLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPA 497
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
G+ + + + D+ + L+D+ + G L + + P
Sbjct: 498 RGK-EIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLP 542
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 197/399 (49%), Gaps = 25/399 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+ +S L CS+ + L G +HA V+K + + V++ ++++YA ++ AR+VFD
Sbjct: 273 TFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDM 332
Query: 63 M--SERNLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSL 116
+ S + L W+AMI G+ QAG AL F++M +P E AS + ACA ++
Sbjct: 333 VPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAF 392
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
+ +H Y +K G A FV N+L+ MY ++G + A ++ P++VS+N LI G
Sbjct: 393 AGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGC 452
Query: 177 VENQQPEKGFEVFKLMLR---QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE 233
V F++ + M + G++P+ + L C++ +G +H V+ L+
Sbjct: 453 VVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALD 512
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
++ VG+ ++ +Y+K + + F + ++ I+WN I A + +F M
Sbjct: 513 TDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRM 572
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQI-HAHLIRMRLNQDVGVGNA------LVN 346
+ RP++ TF + LAAC+ V G Q+ HA + +D GV +V+
Sbjct: 573 TASGEARPNEVTFMAALAACSHSGMVDRGLQLFHA------MERDHGVEPTPDILACVVD 626
Query: 347 MYAKCGLISCSYKLFNEML--HRNVVSWNTIIAAHANHR 383
+ + G + +Y + M + V +W+T++ A HR
Sbjct: 627 ILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHR 665
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 89/179 (49%), Gaps = 7/179 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++ +LL C+ A +G +H ++ + DV V + ++++YAKCG + L+R VFD
Sbjct: 480 AITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFD 539
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLV 117
+ RN ++W+ +I + G A F +M PNE F +A++AC+ +
Sbjct: 540 RLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVD 599
Query: 118 KGQQI-HAYSLKFGYASISFVGNSLISMYMKVGYSSD--ALLVYGEAFEPNLVSFNALI 173
+G Q+ HA G + ++ + + G + A++ EA E + +++ ++
Sbjct: 600 RGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTML 658
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 183/558 (32%), Positives = 293/558 (52%), Gaps = 49/558 (8%)
Query: 22 ISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQA 81
+SL + + D + N +L Y + G++ AR +F+ +E +++SW+A++SG+ Q
Sbjct: 147 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQW 206
Query: 82 GEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS--FVGN 139
G+ A E F +M P + + I + +G + A L F A + F
Sbjct: 207 GKMSEARELFDRM---PGRDVVSWNIMVSGYAR---RGDMVEARRL-FDAAPVRDVFTWT 259
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
+++S Y + G +A V+ E N VS+NA++A +++ + ++ E+F +M
Sbjct: 260 AVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM------- 312
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
C+ N NT++ Y++ ++ EA+ F
Sbjct: 313 -----------------------------PCR---NVASWNTMLTGYAQAGMLEEAKAVF 340
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+ +KD +SW +AA S E+ L +F EM G + FA +L+ CA +A++
Sbjct: 341 DTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGR-CGEWVNRSAFACVLSTCADIAAL 399
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
+ G Q+H LIR VGNAL+ MY KCG + + F EM R+VVSWNT+IA +
Sbjct: 400 ECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGY 459
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
A H G AL++F+ M+ T KPD +T +G+L AC+H+GLV++G +YF SM +G++
Sbjct: 460 ARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAK 519
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLF 499
EH+TC+IDLLGRAG+L EA + K P D + G LL A R+ R+ +G A+++F
Sbjct: 520 PEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIF 579
Query: 500 HLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAE 559
L+P YVLLSN+YAS G W D R M+++ G+KK P +S IEVQ F+ +
Sbjct: 580 ELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGD 639
Query: 560 FSHSKIGEINYMLKTLSL 577
H + +I L+ L +
Sbjct: 640 CVHPEKEKIYAFLEDLDM 657
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 143/332 (43%), Gaps = 56/332 (16%)
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL 198
N I+ +M+ G +DA ++ + ++NA++AG+ N + +F+ + R
Sbjct: 42 NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR---- 97
Query: 199 PDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
PD +S+ L +VS+ L + + V+ + N +++ ++ L+ A
Sbjct: 98 PDNYSYNTLLHALAVSSSLADARGLFDEMPVR-----DSVTYNVMISSHANHGLVSLARH 152
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F L EKD +SWN +AA E+ +F + ++ S A +G
Sbjct: 153 YFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRT--------EWDVISWNALMSGY- 203
Query: 318 SVQHGKQIHAHLIRMRLN--------------------------------QDVGVGNALV 345
VQ GK A + R+ +DV A+V
Sbjct: 204 -VQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVV 262
Query: 346 NMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV 405
+ YA+ G++ + ++F+ M RN VSWN ++AA+ R+ A +LF M +
Sbjct: 263 SGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNV----A 318
Query: 406 TFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
++ +LT AG+++E +A F++M + +S
Sbjct: 319 SWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVS 350
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 122/292 (41%), Gaps = 55/292 (18%)
Query: 231 KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVF 290
+LE N + + + + +AE+ F + + ++N +A S S+F
Sbjct: 33 RLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF 92
Query: 291 KEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
+ + RPD++++ ++L A A +S+ +
Sbjct: 93 RAIP-----RPDNYSYNTLLHALAVSSSLADAR--------------------------- 120
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGL 410
LF+EM R+ V++N +I++HANH L A F+ + D+V++ G+
Sbjct: 121 --------GLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFD----LAPEKDAVSWNGM 168
Query: 411 LTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQ 470
L A G V+E FNS + D+ + L+ + GK+ EA E + P G+
Sbjct: 169 LAAYVRNGRVEEARGLFNSRTEW-----DVISWNALMSGYVQWGKMSEARELFDRMP-GR 222
Query: 471 DPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTS-PYVLLSNLYASDGM 521
D + ++S R D+V A++LF P + + + YA +GM
Sbjct: 223 DVVSWNIMVSGYARRGDMV----EARRLFDAAPVRDVFTWTAVVSGYAQNGM 270
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 187/605 (30%), Positives = 313/605 (51%), Gaps = 41/605 (6%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYA--KCGKMILARK 58
++ + SLL +C L+Q + A ++ G+ D S+ +++ A + + K
Sbjct: 52 LSNPLLSLLENCKSFSQLKQ---IQAQMILTGLILDGFASSRLISFCAISESRNLDYCIK 108
Query: 59 VFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQ 114
+ + + N+ SW+A+I G ++ L + +M P+ Y ++ CA +
Sbjct: 109 ILNNLQNPNVFSWNAVIRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCANLV 168
Query: 115 SLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIA 174
G +I LK G+ ++ N +I M + VG S A V+ E +LVS+N+LI
Sbjct: 169 LSYMGFEILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLIN 228
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHC--------- 225
G+V +QP + +++ M+ + + PD + G + C+ L+ G +H
Sbjct: 229 GYVRRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLNL 288
Query: 226 ----------LTVKC-----------KLESNPFVGNTIMAL-YSKFNLIGEAEKAFRLIE 263
+ VKC + V T M + Y+K L+ A K F +
Sbjct: 289 KISLVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMP 348
Query: 264 EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGK 323
EK++++WN I +C + L +F+EM + ++PD T L+AC+ L ++ G
Sbjct: 349 EKNVVAWNAMIGSCVQANLSFEALELFREMQWSN-MKPDKVTMLHCLSACSQLGALDTGM 407
Query: 324 QIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR 383
H ++ + L+ DV +G AL++MYAKCG ++ + ++FNEM RN ++W II A +
Sbjct: 408 WTHNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLALYG 467
Query: 384 LGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF 443
A+ F +M +G+ PD +TF+G+LTAC H GLV+EG YF+ M+ + +SP +H+
Sbjct: 468 NVNDAIFYFSKMIDSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQMKSRFNLSPQPKHY 527
Query: 444 TCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQP 503
+C+++LLGRAG L EAEE K P+ D +V G L AC + R+++IGER A +L L P
Sbjct: 528 SCMVNLLGRAGLLEEAEELIKTMPMEADAMVWGALFFACGIHRNLLIGERAASKLLDLDP 587
Query: 504 TTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHS 563
+ YVLL+N+Y G W + RKM+ + G++K P S IEV G +F V + SH
Sbjct: 588 HDSGIYVLLANMYREAGKWEEAQNIRKMMMERGVEKTPGSSSIEVNGIINEFIVRDKSHP 647
Query: 564 KIGEI 568
+ +I
Sbjct: 648 QSEQI 652
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 184/586 (31%), Positives = 318/586 (54%), Gaps = 42/586 (7%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAK------CGKMIL-ARKV 59
S+L C+ L G SLH ++++G+ D+ N ++N+Y+K G+ L A +V
Sbjct: 113 SVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQV 172
Query: 60 FDEMSERNLVSWSAMISGHHQAGEHLLALEFFS----------QMHLLPNEYIFASAISA 109
DEM+ER +A + +Q G + +E F+ + +L +Y S
Sbjct: 173 LDEMTERTRSVRTASVLVGNQ-GRKVSDIEAFNYDVSCRSREFEAQVLEIDY---KPRSE 228
Query: 110 CAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSF 169
+++ GQQI S S+ ++ E +LVS+
Sbjct: 229 YREMEACNLGQQIKDISHSMSVDSVR--------------------KIFEMMPEKDLVSW 268
Query: 170 NALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK 229
N +IAG N + + + M L PD F+ + L + + + D+ KG +H +++
Sbjct: 269 NTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIR 328
Query: 230 CKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSV 289
L++ +V ++++ +Y+K + ++ + F L+ E+D ISWN+ IA C +++GL
Sbjct: 329 QGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKF 388
Query: 290 FKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
F++M ++P ++F+SI+ ACA L ++ GKQ+H ++ R ++++ + ++LV+MYA
Sbjct: 389 FRQMLMAK-IKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYA 447
Query: 350 KCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
KCG I + ++F+ M R++VSW +I A H A++LFEQMK GI+P+ V F+
Sbjct: 448 KCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMA 507
Query: 410 LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLG 469
+LTAC+HAGLV E YFNSM +GI+P +EH+ + DLLGRAG+L EA ++ P+G
Sbjct: 508 VLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIG 567
Query: 470 QDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGAR 529
V TLLSACR+ ++V + E++A ++ + P T Y+LL+N+Y++ W + A R
Sbjct: 568 PTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAKWR 627
Query: 530 KMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
L+ +G++K P+ S IEV+ F + SH +I ++ L
Sbjct: 628 ASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAMEVL 673
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 119/212 (56%), Gaps = 3/212 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+L ++ + +G +H ++ G+ +V V++ ++++YAKC +++ + +VF +
Sbjct: 302 TLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLL 361
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ER+ +SW+++I+G Q G L+FF QM + P Y F+S + ACA + +L G+
Sbjct: 362 TERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGK 421
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H Y + G+ F+ +SL+ MY K G A ++ ++VS+ A+I G +
Sbjct: 422 QLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHG 481
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
E+F+ M +G+ P+ +F L CS
Sbjct: 482 HALDAIELFEQMKTEGIEPNYVAFMAVLTACS 513
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 169/381 (44%), Gaps = 36/381 (9%)
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
I+S + QQ+HA LKF AS + L+S+Y + D+L ++ P +++ ++
Sbjct: 21 IKSRSQAQQLHAQVLKF-QASSLCNLSLLLSIYSHINLLHDSLRLFNTLHFPPALAWKSV 79
Query: 173 IAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
I + + P K F ML GL PD F L+ C++ DL G LH ++ L
Sbjct: 80 IRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYIIRVGL 139
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
+ + + GN +M +YSK + ++ + RL + L + + +
Sbjct: 140 DFDLYTGNALMNMYSKLRFLKKSGRQ-RLGASQVL----------DEMTERTRSVRTASV 188
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM--------RLNQDVGVGNAL 344
+ + G + D + +C ++ A ++ + R + +G +
Sbjct: 189 LVGNQGRKVSDIEAFNYDVSC-------RSREFEAQVLEIDYKPRSEYREMEACNLGQQI 241
Query: 345 VNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDS 404
++ + S K+F M +++VSWNTIIA +A + L G L + +M +KPDS
Sbjct: 242 KDISHSMSVDSVR-KIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDS 300
Query: 405 VTFIGLLT-ACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYT 463
T +L + + K E + S+ + G+ ++ + LID+ + +++++
Sbjct: 301 FTLSSVLPLIAENVDISKGKEIHGCSIRQ--GLDAEVYVASSLIDMYAKCTRVVDS---Y 355
Query: 464 KKFPL--GQDPIVLGTLLSAC 482
+ F L +D I ++++ C
Sbjct: 356 RVFTLLTERDGISWNSIIAGC 376
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
++SLL + K+ Q LHA VLK + + +L++Y+ + + ++F+ +
Sbjct: 11 VNSLLRNPLSIKSRSQAQQLHAQVLKFQAS-SLCNLSLLLSIYSHINLLHDSLRLFNTLH 69
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
++W ++I + G +L F M L P+ +F S + ACA + L G+
Sbjct: 70 FPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGES 129
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGY 150
+H Y ++ G + GN+L++MY K+ +
Sbjct: 130 LHGYIIRVGLDFDLYTGNALMNMYSKLRF 158
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 308 SILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR 367
S+L + S +Q+HA +++ + + + + L+++Y+ L+ S +LFN +
Sbjct: 13 SLLRNPLSIKSRSQAQQLHAQVLKFQASS-LCNLSLLLSIYSHINLLHDSLRLFNTLHFP 71
Query: 368 NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
++W ++I + +H L +L F M A+G+ PD F +L AC
Sbjct: 72 PALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKAC 118
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 195/652 (29%), Positives = 327/652 (50%), Gaps = 84/652 (12%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+ LL CSK+ QQ +H+ ++ G ++ V+++YA G + A++VF E+S
Sbjct: 876 NDLLQQCSKSHLSQQ---IHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVF-EVSP 931
Query: 66 ----RNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVK 118
NL+ W++++ + G ALE + +M L + + F I ACA + S
Sbjct: 932 IECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKL 991
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+ +H + ++ G+ VGN L+ MY K+G DA V+ + VS+N +++G+
Sbjct: 992 CRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYAL 1051
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE----------------------------- 209
N E+F++M GL P+ ++ L
Sbjct: 1052 NYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEA 1111
Query: 210 ---ICSVSNDL---RKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIE 263
+ SVS DL +G ++H VK E+ FV N+++ LY K + A F I+
Sbjct: 1112 LAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIK 1171
Query: 264 EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG---VRPD------------------ 302
K+++SWN I++ + ++ ++F ++ VRP+
Sbjct: 1172 TKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGE 1231
Query: 303 -----------------DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALV 345
T AS+L+ CA LA++ G++IH H++R ++ ++ VGN L+
Sbjct: 1232 EALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLI 1291
Query: 346 NMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV 405
NMY K G +F ++ +++++SWNT++A + H LG +A++ F+QM G +PD V
Sbjct: 1292 NMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGV 1351
Query: 406 TFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKK 465
TF+ +L+AC+HAGLV EG F+ M K + + P +EH+ C++DLLGRAG L EA + K
Sbjct: 1352 TFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKS 1411
Query: 466 FPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDV 525
P+ + V G LL++CR+ ++ + E A Q+F+L Y+LLSN+YA+ G W D
Sbjct: 1412 MPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDS 1471
Query: 526 AGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
A R K GLKK P S I+V+ F+ H+++ E+ +LK L L
Sbjct: 1472 AKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDLGL 1523
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 179/406 (44%), Gaps = 58/406 (14%)
Query: 79 HQAGEHLLALEFF-------SQMHLLPNEYI---FASAISACAGIQSLVKGQQIHAYSLK 128
H + L+++ F S +H PN + F + C+ QQIH+ +
Sbjct: 841 HGSSRRLISISFLPNLSRSISIIHHQPNNDVLDFFNDLLQQCSKSH---LSQQIHSQIIV 897
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYG----EAFEPNLVSFNALIAGFVENQQPEK 184
G +F+ ++S+Y G SDA V+ E F NL+ +N+++ V + E+
Sbjct: 898 TGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFS-NLLLWNSILRANVAHGYCEE 956
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
E++ M + G+ D F+F + C++ + +H V+ + N VGN +M
Sbjct: 957 ALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMG 1016
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y K + +A K F + + +SWNT ++ + D +F+ M + G+ P+
Sbjct: 1017 MYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGS-AGLEPNLV 1075
Query: 305 TFASILAACA-----------------------------------GLASVQHGKQIHAHL 329
T+ S+L++ A LA+ GK IH ++
Sbjct: 1076 TWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYV 1135
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
++ + V N+L+ +Y K G ++ + LF E+ +N+VSWN +I+++A+ A
Sbjct: 1136 VKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAF 1195
Query: 390 KLFEQMKATG----IKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
+F Q++ T ++P+ V++ ++ G +E F M+
Sbjct: 1196 AIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQ 1241
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 139/320 (43%), Gaps = 44/320 (13%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A++++ +L A +G +H V+K G + + V N ++ LY K G + AR +F
Sbjct: 1109 AEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFL 1168
Query: 62 EMSERNLVSWSAMIS---------------------------------------GHHQAG 82
E+ +N+VSW+A+IS G G
Sbjct: 1169 EIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKG 1228
Query: 83 EHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
+ ALE F +M L N AS +S CA + +L G++IH + ++ VGN
Sbjct: 1229 QGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGN 1288
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
LI+MY K G + LV+ + +L+S+N ++AG+ + E F M++ G P
Sbjct: 1289 GLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEP 1348
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVK-CKLESNPFVGNTIMALYSKFNLIGEAEKA 258
D +F L CS + + +G L +K ++E ++ L + L+ EA K
Sbjct: 1349 DGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKV 1408
Query: 259 FRLIE-EKDLISWNTFIAAC 277
+ + E + W + +C
Sbjct: 1409 VKSMPVEPNACVWGALLNSC 1428
>gi|357484133|ref|XP_003612353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513688|gb|AES95311.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 181/551 (32%), Positives = 303/551 (54%), Gaps = 18/551 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +SLL CS L + + +H V K G + DV+V + +++LYAKC + RK+FD M
Sbjct: 254 TFASLLKCCS---VLNEVMQIHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSCRKIFDSM 310
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+++ WS+MISG+ A+ FF M + ++++ +S + AC I+ L G
Sbjct: 311 EKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIEDLNTGV 370
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H +K G+ + FV + L+++Y G D ++ + ++V++N++I +
Sbjct: 371 QVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRIDDKDIVAWNSMI---LAQA 427
Query: 181 QPEKG----FEVFKLMLRQGLLPDR-FSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+P +G ++F+ + R L + + L+ C +DL G +H L VK L +
Sbjct: 428 RPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRH 487
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
VGN ++ +YS+ I +A KAF I KD SW++ I C K L + KEM
Sbjct: 488 TLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSIIGTCKQNRMESKALELCKEML- 546
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
D G+ ++ ++AC+ L ++ GKQ+H I+ + DV +G+++++MYAKCG I
Sbjct: 547 DEGINFTSYSLPLCISACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGNIE 606
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
S K+F+E L N V++N II+ +A+H A+++ +++ G+ P+ VTF+ L++AC+
Sbjct: 607 ESEKVFDEQLKPNEVTFNAIISGYAHHGKAQQAIEVLSKLEKNGVAPNHVTFLALMSACS 666
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
HAG V+E F M Y I P EH++CL+D GRAG+L EA + +K
Sbjct: 667 HAGYVEETSHLFTLMLDKYKIKPKSEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAW 723
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
TLLSACR + IGE+ A ++ L P+ +PY+LLSN+Y +G W + RK +
Sbjct: 724 RTLLSACRNHSNRKIGEKSAMKMIELNPSDHAPYILLSNIYIEEGNWEEALNCRKKMAKI 783
Query: 536 GLKKEPSYSMI 546
+KK+P S +
Sbjct: 784 RVKKDPGNSWL 794
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 124/404 (30%), Positives = 209/404 (51%), Gaps = 11/404 (2%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L Q +HA ++ ++N +L+ Y+K A K+FD+M RN+V+W+ +IS
Sbjct: 64 LTQCNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISS 123
Query: 78 HHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
H + G A E F+ M + PNE FA + AC + G QIH ++ G
Sbjct: 124 HLKYGSVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLERE 183
Query: 135 SFVGNSLISMYMKVGYS-SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLML 193
F G+SL+ MY+K G DAL V+ E ++V++N +I+GF +N +F M
Sbjct: 184 KFAGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMW 243
Query: 194 -RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI 252
QGL PDR +FA L+ CSV N++ M +H + K E + V + ++ LY+K +
Sbjct: 244 EEQGLKPDRITFASLLKCCSVLNEV---MQIHGIVYKFGAEVDVVVESAMVDLYAKCRDV 300
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
K F +E+KD W++ I+ + E+ ++ FK+M V+ D +S L A
Sbjct: 301 SSCRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQR-VKLDQHVLSSTLKA 359
Query: 313 CAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
C + + G Q+H +I+ D V + L+N+YA G + KLF+ + +++V+W
Sbjct: 360 CVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRIDDKDIVAW 419
Query: 373 NTIIAAHANHRLG-GSALKLFEQMKATG-IKPDSVTFIGLLTAC 414
N++I A A G G ++LF++++ T ++ T + +L +C
Sbjct: 420 NSMILAQARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSC 463
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 56/100 (56%)
Query: 324 QIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR 383
QIHA LI + + N L++ Y+K ++KLF++M +RNVV+W T+I++H +
Sbjct: 69 QIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYG 128
Query: 384 LGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
A ++F M+ + +P+ TF LL AC + L G
Sbjct: 129 SVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVG 168
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 179/593 (30%), Positives = 305/593 (51%), Gaps = 40/593 (6%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYA--KCGKMILARKVFDEMS 64
SL+ C + L+Q H +++ G D ++ + + A + ARKVFDE+
Sbjct: 35 SLIERCVSLRQLKQ---THGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIP 91
Query: 65 ERNLVSWSAMISGHHQAGEHLLA----LEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
+ N +W+ +I + + +L+ L+ S+ PN+Y F I A A + SL GQ
Sbjct: 92 KPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQ 151
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H ++K S FV NSLI Y G A V+ E ++VS+N++I GFV+
Sbjct: 152 SLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKG 211
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
P+K E+FK M + + + G L C+ +L G + + ++ N + N
Sbjct: 212 SPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLAN 271
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYE---------------- 284
++ +Y+K I +A++ F +EEKD ++W T + + DYE
Sbjct: 272 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA 331
Query: 285 ---------------KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
+ L VF E+ ++ + T S L+ACA + +++ G+ IH+++
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
+ + + V +AL++MY+KCG + S ++FN + R+V W+ +I A H G A+
Sbjct: 392 KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAV 451
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
+F +M+ +KP+ VTF + AC+H GLV E E+ F+ ME YGI P+ +H+ C++D+
Sbjct: 452 DMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDV 511
Query: 450 LGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPY 509
LGR+G L +A ++ + P+ V G LL AC++ ++ + E +L L+P +
Sbjct: 512 LGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAH 571
Query: 510 VLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
VLLSN+YA G W +V+ RK ++ +GLKKEP S IE+ G +F + +H
Sbjct: 572 VLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAH 624
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S L C++ AL+ G +H+ + K GI+ + V++ ++++Y+KCG + +R+VF+ +
Sbjct: 367 TLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV 426
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
+R++ WSAMI G G A++ F +M ++ PN F + AC+
Sbjct: 427 EKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACS 477
>gi|297836444|ref|XP_002886104.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331944|gb|EFH62363.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 723
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 181/566 (31%), Positives = 315/566 (55%), Gaps = 17/566 (3%)
Query: 20 QGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHH 79
G +H V++ G V N +L LY++ + ARK+FDEMSER+++SWS +I +
Sbjct: 151 DGEKIHGYVIRSGFWRISSVQNSILCLYSEFDSL-SARKLFDEMSERDVISWSVVIRSYV 209
Query: 80 QAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS 135
Q+ E +L LE F +M P+ S + ACA + + G+ +H +S++ G+ +
Sbjct: 210 QSQEPVLGLELFKEMVREAKTEPDCVTVTSVLKACAVLDDIDVGRSVHGFSIRRGFDLVD 269
Query: 136 -FVGNSLISMYMKVGYSSD-ALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLML 193
FV NSLI MY K GY +D A V+ E N+VS+N+++AGFV NQ+ ++ E+F+LM
Sbjct: 270 VFVRNSLIDMYSK-GYDADSAFRVFDETTCRNIVSWNSILAGFVYNQRYDEALEMFRLMK 328
Query: 194 RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
++ L D + L++C +H + ++ ESN +++M Y+ +L+
Sbjct: 329 KEALEADEVTLVSLLQVCKFFEHPLPCKSIHGVIIRRGYESNEVALSSLMDAYTSCSLVD 388
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
+A F + KD++S +T I+ C ++ +S+F +M + +P+ T S+L+AC
Sbjct: 389 DARTVFDSMSYKDVVSCSTMISGLGRCGRSDEAISIFCQMRD----KPNAITVISLLSAC 444
Query: 314 AGLASVQHGKQIHAHLIRMRLN-QDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSW 372
+ A ++ K H IR L D+ V ++V+ YAKCG I + + F+++ +++VSW
Sbjct: 445 SVSAVLRTSKWAHGIAIRRGLAINDISVDTSIVDAYAKCGAIDIARRTFDQITEKSIVSW 504
Query: 373 NTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEK 432
II+A+A + L AL F++MK P++VT++ L+ACNH GLVK+G F SM +
Sbjct: 505 TVIISAYAINGLPDKALASFDEMKRDSYTPNAVTYLAALSACNHGGLVKKGLMIFRSMVE 564
Query: 433 TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP--LGQDPIVLGTLLSACRLR-RDVV 489
P ++H++C++D+L RAG++ A E K P + G +LS CR R + +
Sbjct: 565 E-DQKPSLQHYSCIVDMLSRAGEIDTAMELIKNLPEDVKAGASAWGAILSGCRNRLKSGI 623
Query: 490 IGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQ 549
I + ++ L+P +S Y+L S+++A++ W DVA R+++K+ ++ YSM+
Sbjct: 624 ITSEVVAEVLELEPLCSSGYLLASSVFAAEKSWVDVAMMRRLVKERNVRVVAGYSMVLEG 683
Query: 550 GTFEKFTVAEFSHSKIGEINYMLKTL 575
KF + + E+N +++ L
Sbjct: 684 SIARKFLAGDKLNHSDSELNDVVQRL 709
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 230/437 (52%), Gaps = 20/437 (4%)
Query: 29 LKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLAL 88
L G + V V N + + Y KCG + + FD M+ R+ VSW+ ++ G G L
Sbjct: 61 LLQGFESYVSVGNSIADFYMKCGDLCSGLRAFDCMNSRDSVSWNVIVFGLLDHGFEEEGL 120
Query: 89 EFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMY 145
+FS++ + PN I AC + G++IH Y ++ G+ IS V NS++ +Y
Sbjct: 121 WWFSKLRVWGFEPNVSTLVLVIHACRSL--WFDGEKIHGYVIRSGFWRISSVQNSILCLY 178
Query: 146 MKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL-PDRFSF 204
+ S A ++ E E +++S++ +I +V++Q+P G E+FK M+R+ PD +
Sbjct: 179 SEFD-SLSARKLFDEMSERDVISWSVVIRSYVQSQEPVLGLELFKEMVREAKTEPDCVTV 237
Query: 205 AGGLEICSVSNDLRKGMILHCLTVKCKLE-SNPFVGNTIMALYSKFNLIGEAEKAFRLIE 263
L+ C+V +D+ G +H +++ + + FV N+++ +YSK +A+ AFR+ +
Sbjct: 238 TSVLKACAVLDDIDVGRSVHGFSIRRGFDLVDVFVRNSLIDMYSKGY---DADSAFRVFD 294
Query: 264 E---KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
E ++++SWN+ +A + Y++ L +F+ M + + D+ T S+L C
Sbjct: 295 ETTCRNIVSWNSILAGFVYNQRYDEALEMFRLMKKE-ALEADEVTLVSLLQVCKFFEHPL 353
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
K IH +IR + ++L++ Y C L+ + +F+ M +++VVS +T+I+
Sbjct: 354 PCKSIHGVIIRRGYESNEVALSSLMDAYTSCSLVDDARTVFDSMSYKDVVSCSTMISGLG 413
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE-AYFNSMEKTYGISPD 439
A+ +F QM+ KP+++T I LL+AC+ + +++ + A+ ++ + I+ D
Sbjct: 414 RCGRSDEAISIFCQMRD---KPNAITVISLLSACSVSAVLRTSKWAHGIAIRRGLAIN-D 469
Query: 440 IEHFTCLIDLLGRAGKL 456
I T ++D + G +
Sbjct: 470 ISVDTSIVDAYAKCGAI 486
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 11/114 (9%)
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D F F + ACA L+ + G + + V VGN++ + Y KCG + + F
Sbjct: 44 DPFVFPIVFKACAKLSWLLQGFESY-----------VSVGNSIADFYMKCGDLCSGLRAF 92
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ M R+ VSWN I+ +H L F +++ G +P+ T + ++ AC
Sbjct: 93 DCMNSRDSVSWNVIVFGLLDHGFEEEGLWWFSKLRVWGFEPNVSTLVLVIHACR 146
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 191/571 (33%), Positives = 310/571 (54%), Gaps = 5/571 (0%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
L C + ++QG+ +HA VLK +V V+N ++ +YA+ GKM A +F M + +
Sbjct: 325 LQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDT 384
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAY 125
+SW++M+SG Q G + AL+F+ +M P+ S I+A A + + G QIHAY
Sbjct: 385 ISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAY 444
Query: 126 SLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKG 185
++K G S VGNSL+ MY K ++ + + ++VS+ +IAG +N +
Sbjct: 445 AMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRA 504
Query: 186 FEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMAL 245
E+F+ + +G+ D + L CS + +H ++ L S+ + N I+ +
Sbjct: 505 LELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDV 563
Query: 246 YSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFT 305
Y + + A + F LIE KD++SW + I+ H + L +F M + GV PD +
Sbjct: 564 YGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLM-KETGVEPDSIS 622
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
SIL+A A L++++ GK+IH LIR + + + LV+MYA+CG + S +FN +
Sbjct: 623 LVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIR 682
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
++++V W ++I A+ H G +A+ LF +M+ I PD + F+ +L AC+H+GL+ EG
Sbjct: 683 NKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRR 742
Query: 426 YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLR 485
+ SM+ Y + P EH+ CL+DLLGRA L EA ++ K + V LL AC++
Sbjct: 743 FLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIH 802
Query: 486 RDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSM 545
+ +GE A++L + P YVL+SN+YA++ W DV R +K SGLKK P S
Sbjct: 803 SNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSW 862
Query: 546 IEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
IEV F + SH + EI L ++
Sbjct: 863 IEVGNKVHTFMARDKSHPQSYEIYSKLSQIT 893
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 163/518 (31%), Positives = 275/518 (53%), Gaps = 29/518 (5%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHA-AVLKMGIQPDVIVSNHVLNLYAKCGKMILARKV 59
+ ++ SS+L C KAL +G +HA + + V +S ++ +Y KCG ++ A K+
Sbjct: 113 LDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKL 172
Query: 60 FDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL--LP-NEYIFASAISACAGIQSL 116
FD M + + +W+AMI + GE L +LE + +M + +P + F + AC ++
Sbjct: 173 FDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDR 232
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE-PNLVSFNALIAG 175
G ++H ++K GY SI FV NS++ MY K + A ++ E ++VS+N++I+
Sbjct: 233 RCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISA 292
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+ N Q + +F M + L P+ ++F L+ C S+ +++GM +H +K N
Sbjct: 293 YSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYIN 352
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
FV N ++A+Y++F +GEA F +++ D ISWN+ ++ Y + L + EM
Sbjct: 353 VFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEM-R 411
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
D G +PD SI+AA A + +G QIHA+ ++ L+ D+ VGN+LV+MYAK
Sbjct: 412 DAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAK----F 467
Query: 356 CSYK----LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
CS K +F++M ++VVSW TIIA HA + AL+LF +++ GI D + +L
Sbjct: 468 CSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSIL 527
Query: 412 TACNHAGL---VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL 468
AC+ L VKE +Y + K G+S D+ ++D+ G G + A + F L
Sbjct: 528 LACSGLKLISSVKEIHSYI--IRK--GLS-DLVLQNGIVDVYGECGNVDYA---ARMFEL 579
Query: 469 GQ-DPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTT 505
+ +V T + +C + + A +LFHL T
Sbjct: 580 IEFKDVVSWTSMISCYVHNGLA---NEALELFHLMKET 614
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 142/484 (29%), Positives = 263/484 (54%), Gaps = 8/484 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +L C K + G +H +K G V V+N ++ +Y KC + AR++FD
Sbjct: 216 ACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFD 275
Query: 62 EMSER-NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLV 117
M E+ ++VSW++MIS + G+ + AL F +M L PN Y F +A+ AC +
Sbjct: 276 RMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIK 335
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+G IHA LK Y FV N+LI+MY + G +A ++ + + +S+N++++GFV
Sbjct: 336 QGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFV 395
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+N + + + M G PD + + + S + GM +H +K L+S+
Sbjct: 396 QNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQ 455
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
VGN+++ +Y+KF + + F + +KD++SW T IA + + + L +F+E+ +
Sbjct: 456 VGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLE- 514
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
G+ D +SIL AC+GL + K+IH+++IR L+ D+ + N +V++Y +CG + +
Sbjct: 515 GIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNVDYA 573
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++F + ++VVSW ++I+ + ++ L AL+LF MK TG++PDS++ + +L+A
Sbjct: 574 ARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASL 633
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
+K+G+ + + G + + L+D+ R G LE F +D ++ +
Sbjct: 634 SALKKGKEIHGFLIRK-GFVLEGSLASTLVDMYARCGT-LEKSRNVFNFIRNKDLVLWTS 691
Query: 478 LLSA 481
+++A
Sbjct: 692 MINA 695
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 167/324 (51%), Gaps = 5/324 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S++ +++ G+ +HA +K G+ D+ V N ++++YAK M +FD+M
Sbjct: 421 AVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKM 480
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVKGQ 120
++++VSW+ +I+GH Q G H ALE F ++ L + + +S + AC+G++ + +
Sbjct: 481 PDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVK 540
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+IH+Y ++ G + + + N ++ +Y + G A ++ ++VS+ ++I+ +V N
Sbjct: 541 EIHSYIIRKGLSDL-VLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNG 599
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ E+F LM G+ PD S L + + L+KG +H ++ + +
Sbjct: 600 LANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLAS 659
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
T++ +Y++ + ++ F I KDL+ W + I A + +F+ M D +
Sbjct: 660 TLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRME-DESIA 718
Query: 301 PDDFTFASILAACAGLASVQHGKQ 324
PD F ++L AC+ + G++
Sbjct: 719 PDHIAFVAVLYACSHSGLMNEGRR 742
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 179/557 (32%), Positives = 293/557 (52%), Gaps = 43/557 (7%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS--ERNLVSWSAMISGH 78
GI HA VLK+G D V N V+++YA+ G + ARKVFDE+ ER + W+AM+SG+
Sbjct: 114 GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGY 173
Query: 79 HQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVG 138
+ A F M P +
Sbjct: 174 WKWESEGQAQWLFDVM---PERNVI---------------------------------TW 197
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL 198
++++ Y KV A + E ++VS+NA+++G+ +N E+ +F M+ G+
Sbjct: 198 TAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIE 257
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKA 258
PD ++ + CS D L + +++ N FV ++ +Y+KF + A K
Sbjct: 258 PDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKL 317
Query: 259 FRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
F + +++++WN+ IA + + +FKEM + PD+ T S+++AC L +
Sbjct: 318 FNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGA 377
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA 378
++ G + L ++ + NA++ MY++CG + + ++F EM R+VVS+NT+I+
Sbjct: 378 LELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISG 437
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISP 438
A H G A+ L MK GI+PD VTFIG+LTAC+HAGL++EG F S++ P
Sbjct: 438 FAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK-----DP 492
Query: 439 DIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQL 498
I+H+ C++DLLGR G+L +A+ ++ P+ V G+LL+A R+ + V +GE A +L
Sbjct: 493 AIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKL 552
Query: 499 FHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVA 558
F L+P + ++LLSN+YAS G W DV R+ +K G+KK +S +E G KF VA
Sbjct: 553 FELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVA 612
Query: 559 EFSHSKIGEINYMLKTL 575
+ SH + +I +L L
Sbjct: 613 DRSHERSDDIYQLLIEL 629
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 164/391 (41%), Gaps = 73/391 (18%)
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN 215
L++ PN+ F +++ + Q K +++ M G+ PD F + ++
Sbjct: 55 LLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTG- 113
Query: 216 DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKA----------------- 258
G+ H +K S+ FV N ++ +Y++ IG A K
Sbjct: 114 ----GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAM 169
Query: 259 ----------------FRLIEEKDLISWNTFIAACSHCADYE------------------ 284
F ++ E+++I+W + + D E
Sbjct: 170 VSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWN 229
Query: 285 -------------KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIR 331
+ L +F EM N G+ PD+ T+ ++++AC+ + L +
Sbjct: 230 AMLSGYAQNGLAEEALRLFDEMVNA-GIEPDETTWVTVISACSSRGDPCLAASLVRTLHQ 288
Query: 332 MRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
R+ + V AL++MYAK G + + KLFN M RNVV+WN++IA +A + A++L
Sbjct: 289 KRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIEL 348
Query: 392 FEQM-KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLL 450
F++M A + PD VT + +++AC H G ++ G + + I I +I +
Sbjct: 349 FKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQ-IKLSISGHNAMIFMY 407
Query: 451 GRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
R G + +A+ ++ +D + TL+S
Sbjct: 408 SRCGSMEDAKRVFQEMAT-RDVVSYNTLISG 437
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 66/122 (54%), Gaps = 3/122 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S++ C AL+ G + + + I+ + N ++ +Y++CG M A++VF EM
Sbjct: 364 TMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEM 423
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+ R++VS++ +ISG G + A+ S M + P+ F ++AC+ L +G+
Sbjct: 424 ATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGR 483
Query: 121 QI 122
++
Sbjct: 484 KV 485
>gi|302766259|ref|XP_002966550.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
gi|300165970|gb|EFJ32577.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
Length = 732
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 180/520 (34%), Positives = 289/520 (55%), Gaps = 13/520 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ ++LL+ CS + L +G S+H +V+ MG+ D +V + +L +Y KCG + ++ E+
Sbjct: 219 TYATLLNACSSGEDLGEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEV 278
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
ERN ++W+ +I + + +H AL F QM L + F + C+ L +G
Sbjct: 279 HERNTIAWNTIIGAYARYSDHFQALRSFQQMQLQGVKADAVTFVLMLGTCSSPAHLAQGI 338
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H + + G+ SI V NSL +MY K G A ++ N VS+N+LI+ +++
Sbjct: 339 LLHDWISQLGFESI-IVHNSLTAMYAKCGSLDAARKMFEGMPSRNSVSWNSLISAAIQHG 397
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ F+ M +G PD + L+ C+ + ++G +H + V+ + V N
Sbjct: 398 CYADAHKFFQRMKLEGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVAN 457
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK-EMSNDHGV 299
++ +Y+K A F + E++ +SWNT +AA EKGL+ EM V
Sbjct: 458 ALIFMYAKLGDHEAARNVFDAMAERNTVSWNTILAAY-----VEKGLNRDAVEMFWKMDV 512
Query: 300 RPDDFTFASILAACAGLAS-VQHGKQIHAHLIRMRLNQ--DVGVGNALVNMYAKCGLISC 356
D T+ + L AC+GLA + HGK IH +++ + D ALVNMY KCG +
Sbjct: 513 ARDKVTYVAALDACSGLAGGLAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQE 572
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
+ K+F+EMLHR+VV+W ++I A+A H ALKL + M+ G+K D V F+ +L+ C+H
Sbjct: 573 ARKIFDEMLHRDVVTWTSLIVAYAQHSEIEQALKLVKIMEQDGVKVDDVVFLSILSGCDH 632
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLG 476
+GL++EG YF SM YGISP +EH+ C+ID+LGRAG L AE+ + P D V
Sbjct: 633 SGLLEEGCKYFVSMIDDYGISPRLEHYNCIIDVLGRAGHLDLAEKLVDRLPSRSDSKVWM 692
Query: 477 TLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLY 516
TLL+ACR+ + G+R A+++ L P+ + YV+LSN+Y
Sbjct: 693 TLLAACRMHGNPERGKRAARRITLLDPSIPAAYVVLSNIY 732
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 132/424 (31%), Positives = 226/424 (53%), Gaps = 12/424 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+ L C+ AL G +HA + + G++ D+ +N ++N+Y KC A ++F M
Sbjct: 23 TCLRACTVEGALDDGRKVHAYIRESGLETDIYAANALINMYGKCRSPEDAFQLFSRMESP 82
Query: 67 NLVSWSAMISGHHQAGEHL--LALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQ 121
N+VSW+++I Q G HL ++ F +M L PN + + AC +L G+Q
Sbjct: 83 NVVSWTSVIGNFAQYG-HLGRESVLLFRKMELEGIRPNLITMVAVLRAC----NLTDGRQ 137
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+H Y L+ G + + +GN+L+ MY K G +A LV E + +++S+N +I+G+ ++
Sbjct: 138 VHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVLREMPKRDVISWNIMISGYAQSGD 197
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
++G M + GL P + ++A L CS DL +G +H V L+ + V +
Sbjct: 198 CKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLGEGKSIHRSVVDMGLDRDEVVKSF 257
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y K + + +++ + E++ I+WNT I A + +D+ + L F++M GV+
Sbjct: 258 LLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQL-QGVKA 316
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D TF +L C+ A + G +H + ++ + + V N+L MYAKCG + + K+F
Sbjct: 317 DAVTFVLMLGTCSSPAHLAQGILLHDWISQLGF-ESIIVHNSLTAMYAKCGSLDAARKMF 375
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
M RN VSWN++I+A H A K F++MK G +PD VT I +L AC K
Sbjct: 376 EGMPSRNSVSWNSLISAAIQHGCYADAHKFFQRMKLEGSRPDEVTCISMLDACTKQANAK 435
Query: 422 EGEA 425
EG +
Sbjct: 436 EGSS 439
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 204/399 (51%), Gaps = 12/399 (3%)
Query: 87 ALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLIS 143
ALE + +M L P+ F + + AC +L G+++HAY + G + + N+LI+
Sbjct: 2 ALELYKRMQLEGVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANALIN 61
Query: 144 MYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE-NQQPEKGFEVFKLMLRQGLLPDRF 202
MY K DA ++ PN+VS+ ++I F + + +F+ M +G+ P+
Sbjct: 62 MYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLI 121
Query: 203 SFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLI 262
+ L C++++ G +H ++ + + +GN ++ +Y K + EA+ R +
Sbjct: 122 TMVAVLRACNLTD----GRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVLREM 177
Query: 263 EEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG 322
++D+ISWN I+ + D ++GL M D G+ P T+A++L AC+ + G
Sbjct: 178 PKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQD-GLSPTKVTYATLLNACSSGEDLGEG 236
Query: 323 KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH 382
K IH ++ M L++D V + L+ MY KCG + + E+ RN ++WNTII A+A +
Sbjct: 237 KSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARY 296
Query: 383 RLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEH 442
AL+ F+QM+ G+K D+VTF+ +L C+ + +G + + + G I H
Sbjct: 297 SDHFQALRSFQQMQLQGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQ-LGFESIIVH 355
Query: 443 FTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+ L + + G L A + + P ++ + +L+SA
Sbjct: 356 NS-LTAMYAKCGSLDAARKMFEGMP-SRNSVSWNSLISA 392
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 143/277 (51%), Gaps = 13/277 (4%)
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ E++K M +G+ PD +F L C+V L G +H + LE++ + N ++
Sbjct: 1 QALELYKRMQLEGVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANALI 60
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADY----EKGLSVFKEMSNDHGV 299
+Y K +A + F +E +++SW + I + A Y + + +F++M + G+
Sbjct: 61 NMYGKCRSPEDAFQLFSRMESPNVVSWTSVIG---NFAQYGHLGRESVLLFRKMELE-GI 116
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
RP+ T ++L AC ++ G+Q+H +++ ++ D +GNALV+MY K G + +
Sbjct: 117 RPNLITMVAVLRAC----NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADL 172
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+ EM R+V+SWN +I+ +A L+ +M+ G+ P VT+ LL AC+
Sbjct: 173 VLREMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGED 232
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+ EG++ S+ G+ D + L+ + G+ G L
Sbjct: 233 LGEGKSIHRSVVDM-GLDRDEVVKSFLLGMYGKCGSL 268
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 130/261 (49%), Gaps = 15/261 (5%)
Query: 285 KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNAL 344
+ L ++K M + GVRPD TF + L AC ++ G+++HA++ L D+ NAL
Sbjct: 1 QALELYKRMQLE-GVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANAL 59
Query: 345 VNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH-RLGGSALKLFEQMKATGIKPD 403
+NMY KC +++LF+ M NVVSW ++I A + LG ++ LF +M+ GI+P+
Sbjct: 60 INMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPN 119
Query: 404 SVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYT 463
+T + +L ACN L + + +E G+S D L+D+ + G + EA+
Sbjct: 120 LITMVAVLRACN---LTDGRQVHGYVLEA--GMSLDTSLGNALVDMYCKTGDVDEADLVL 174
Query: 464 KKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSP----YVLLSNLYASD 519
++ P +D I ++S D G R L+ +Q SP Y L N +S
Sbjct: 175 REMP-KRDVISWNIMISGYAQSGDCKEGLRC---LWRMQQDGLSPTKVTYATLLNACSSG 230
Query: 520 GMWGDVAGARKMLKDSGLKKE 540
G+ + + D GL ++
Sbjct: 231 EDLGEGKSIHRSVVDMGLDRD 251
>gi|255538308|ref|XP_002510219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550920|gb|EEF52406.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 181/537 (33%), Positives = 285/537 (53%), Gaps = 12/537 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ LL C + + + QG S+H +K G+ D V N + ++YAKCG + A +F+EM
Sbjct: 545 TLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKNALTSMYAKCGDLEAAEYLFEEM 604
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSL----VKG 119
++++VSW+ MI + Q G FF + + I A + I SL
Sbjct: 605 MDKSVVSWNTMIGAYGQNG-------FFDEAMFVFKRMIGAGVEVSQVTIMSLPSANANP 657
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ IH Y++K G A + V SLI MY + G + A L+Y + NLVS A+I + E
Sbjct: 658 ESIHCYTIKVGLADDASVVTSLICMYARYGSTDHAELLYWSLPQKNLVSLTAIITSYAEA 717
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
E F M + + PD + L + + G + H +K L++ V
Sbjct: 718 GNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVHICIGHVFHGYAIKSGLDTFNLVT 777
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N ++++YSKFN + F + EK LISWN+ I+ C + +F +M HG
Sbjct: 778 NGLISMYSKFNNVEALFGLFSGMHEKPLISWNSVISGCVQAGRASHAIELFCQMKM-HGC 836
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
PD T AS+L+ C+ L +Q G+++H++++R +L + VG AL++MY KCG I + +
Sbjct: 837 NPDAITIASLLSGCSQLGYLQFGERLHSYILRNKLEMEDFVGTALIHMYTKCGSIVHAER 896
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F + + +WN +I+ ++ + AL + +M+ G++PD +TF+G+L AC H GL
Sbjct: 897 VFKSIGKPCLATWNAMISGYSCYGFEHKALTCYSEMQEQGVEPDKITFLGVLAACTHGGL 956
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
+ EG YF M K Y + P ++H C++ LL R G EA + K D V G L
Sbjct: 957 IHEGRRYFQIMTKVYDMVPTLQHCACMVGLLARVGLFEEALLFIKNMEKEPDSAVWGAFL 1016
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSG 536
SAC + ++V +GE LAK+L+ L YVL+SNLYA G W DVA R+M+KD+G
Sbjct: 1017 SACCIHQEVKLGEYLAKKLYLLDCRNGGLYVLMSNLYAVTGRWDDVARVREMMKDAG 1073
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 222/453 (49%), Gaps = 15/453 (3%)
Query: 17 ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMIS 76
A + I + ++K GI V VS +L+LY K G++ A FD M R++VSW+A+I
Sbjct: 457 ANTEAIQIQNHLIKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALIC 516
Query: 77 GHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYAS 133
G+ + G ALE F QM L P + + +C ++ + +G+ IH + +K G
Sbjct: 517 GYSRNGYDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHL 576
Query: 134 ISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLML 193
V N+L SMY K G A ++ E + ++VS+N +I + +N ++ VFK M+
Sbjct: 577 DPQVKNALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMI 636
Query: 194 RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
G+ + + I S+ + +HC T+K L + V +++ +Y+++
Sbjct: 637 GAGVEVSQVT------IMSLPSANANPESIHCYTIKVGLADDASVVTSLICMYARYGSTD 690
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
AE + + +K+L+S I + + + + F +M + ++PD SIL
Sbjct: 691 HAELLYWSLPQKNLVSLTAIITSYAEAGNLGLVMESFSQM-HQLNMKPDSVAMLSILHGI 749
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
A + G H + I+ L+ V N L++MY+K + + LF+ M + ++SWN
Sbjct: 750 ADPVHICIGHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPLISWN 809
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT 433
++I+ A++LF QMK G PD++T LL+ C+ G ++ GE + + +
Sbjct: 810 SVISGCVQAGRASHAIELFCQMKMHGCNPDAITIASLLSGCSQLGYLQFGERLHSYILRN 869
Query: 434 YGISPDIEHF--TCLIDLLGRAGKLLEAEEYTK 464
++E F T LI + + G ++ AE K
Sbjct: 870 ---KLEMEDFVGTALIHMYTKCGSIVHAERVFK 899
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 178/407 (43%), Gaps = 40/407 (9%)
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QI + +K G +V +L+ +YMK+G S A + ++VS+NALI G+ N
Sbjct: 463 QIQNHLIKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNG 522
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E+F ML+ G P + + G L C + +G +H +K L +P V N
Sbjct: 523 YDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKN 582
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+ ++Y+K + AE F + +K ++SWNT I A +++ + VFK M GV
Sbjct: 583 ALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIG-AGVE 641
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
T S+ +A A S IH + I++ L D V +L+ MYA+ G + L
Sbjct: 642 VSQVTIMSLPSANANPES------IHCYTIKVGLADDASVVTSLICMYARYGSTDHAELL 695
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN----- 415
+ + +N+VS II ++A G ++ F QM +KPDSV + +L
Sbjct: 696 YWSLPQKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVHI 755
Query: 416 ------HAGLVKEG--------------EAYFNSMEKTYGI------SPDIEHFTCLIDL 449
H +K G + FN++E +G+ P I + +
Sbjct: 756 CIGHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPLISWNSVISGC 815
Query: 450 L--GRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERL 494
+ GRA +E K D I + +LLS C + GERL
Sbjct: 816 VQAGRASHAIELFCQMKMHGCNPDAITIASLLSGCSQLGYLQFGERL 862
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A +I+SLL CS+ LQ G LH+ +L+ ++ + V ++++Y KCG ++ A +VF
Sbjct: 840 AITIASLLSGCSQLGYLQFGERLHSYILRNKLEMEDFVGTALIHMYTKCGSIVHAERVFK 899
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA 111
+ + L +W+AMISG+ G AL +S+M + P++ F ++AC
Sbjct: 900 SIGKPCLATWNAMISGYSCYGFEHKALTCYSEMQEQGVEPDKITFLGVLAACT 952
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 183/558 (32%), Positives = 292/558 (52%), Gaps = 49/558 (8%)
Query: 22 ISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQA 81
+SL + + D + N +L Y + G++ AR +F+ +E + +SW+A++SG+ Q
Sbjct: 147 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQW 206
Query: 82 GEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS--FVGN 139
G+ A E F +M P + + I + +G + A L F A + F
Sbjct: 207 GKMSEARELFDRM---PGRDVVSWNIMVSGYAR---RGDMVEARRL-FDAAPVRDVFTWT 259
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
+++S Y + G +A V+ E N VS+NA++A +++ + ++ E+F +M
Sbjct: 260 AVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM------- 312
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
C+ N NT++ Y++ ++ EA+ F
Sbjct: 313 -----------------------------PCR---NVASWNTMLTGYAQAGMLEEAKAVF 340
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
+ +KD +SW +AA S E+ L +F EM G + FA +L+ CA +A++
Sbjct: 341 DTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGR-CGEWVNRSAFACVLSTCADIAAL 399
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
+ G Q+H LIR VGNAL+ MY KCG + + F EM R+VVSWNT+IA +
Sbjct: 400 ECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGY 459
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
A H G AL++F+ M+ T KPD +T +G+L AC+H+GLV++G +YF SM +G++
Sbjct: 460 ARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAK 519
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLF 499
EH+TC+IDLLGRAG+L EA + K P D + G LL A R+ R+ +G A+++F
Sbjct: 520 PEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIF 579
Query: 500 HLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAE 559
L+P YVLLSN+YAS G W D R M+++ G+KK P +S IEVQ F+ +
Sbjct: 580 ELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGD 639
Query: 560 FSHSKIGEINYMLKTLSL 577
H + +I L+ L +
Sbjct: 640 CVHPEKEKIYAFLEDLDM 657
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 144/332 (43%), Gaps = 56/332 (16%)
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL 198
N I+ +M+ G +DA ++ + ++NA++AG+ N + +F+ + R
Sbjct: 42 NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR---- 97
Query: 199 PDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
PD +S+ L +VS+ L + + V+ + N +++ ++ L+ A
Sbjct: 98 PDNYSYNTLLHALAVSSSLADARGLFDEMPVR-----DSVTYNVMISSHANHGLVSLARH 152
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F L EKD +SWN +AA E+ +F + D ++ ++++
Sbjct: 153 YFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTE-----WDAISWNALMS-----G 202
Query: 318 SVQHGKQIHAHLIRMRLN--------------------------------QDVGVGNALV 345
VQ GK A + R+ +DV A+V
Sbjct: 203 YVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVV 262
Query: 346 NMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV 405
+ YA+ G++ + ++F+ M RN VSWN ++AA+ R+ A +LF M +
Sbjct: 263 SGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNV----A 318
Query: 406 TFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
++ +LT AG+++E +A F++M + +S
Sbjct: 319 SWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVS 350
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 122/292 (41%), Gaps = 55/292 (18%)
Query: 231 KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVF 290
+LE N + + + + +AE+ F + + ++N +A S S+F
Sbjct: 33 RLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF 92
Query: 291 KEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
+ + RPD++++ ++L A A +S+ +
Sbjct: 93 RAIP-----RPDNYSYNTLLHALAVSSSLADAR--------------------------- 120
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGL 410
LF+EM R+ V++N +I++HANH L A F+ + D+V++ G+
Sbjct: 121 --------GLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFD----LAPEKDAVSWNGM 168
Query: 411 LTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQ 470
L A G V+E FNS + IS + L+ + GK+ EA E + P G+
Sbjct: 169 LAAYVRNGRVEEARGLFNSRTEWDAIS-----WNALMSGYVQWGKMSEARELFDRMP-GR 222
Query: 471 DPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTS-PYVLLSNLYASDGM 521
D + ++S R D+V A++LF P + + + YA +GM
Sbjct: 223 DVVSWNIMVSGYARRGDMV----EARRLFDAAPVRDVFTWTAVVSGYAQNGM 270
>gi|357502061|ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496334|gb|AES77537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 605
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 191/575 (33%), Positives = 304/575 (52%), Gaps = 20/575 (3%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
LH C+ ++Q +HA ++K + D ++ ++ Y+ + A VF+++ + N+
Sbjct: 29 LHKCTNPNHIKQ---IHAQLIKCHLHQDPYIAPKLIASYSLTNNLSSAVNVFNQVPDPNV 85
Query: 69 VSWSAMISGHHQAGEH---LLALEFFSQMHL---LPNEYIFASAISACAGIQSLVK-GQQ 121
++ +I + +G L A +MH+ L + + + + C G S + +
Sbjct: 86 HLYNYLIRAYSLSGNESNSLCAFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSWLSLVKM 145
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+HA+ K G+ FV NSLI Y + G A+ V+ E ++VS+N+++ G V+N
Sbjct: 146 VHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGD 205
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ +VF M + DR S+ L+ + + ++ K L + E + +T
Sbjct: 206 LDGALKVFDEMPER----DRVSWNTMLDGFTKAGEMDKAFKL----FERMAERDIVSWST 257
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ YSK + A F K+L+ W T I+ + ++ +++ EM G+R
Sbjct: 258 MVCGYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKS-GLRL 316
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
DD F SILAACA + GK++H +R R V N+ ++MYAKCG + ++++F
Sbjct: 317 DDGFFISILAACAESGMLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVF 376
Query: 362 NEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
N M +++VSWN++I H G +++LF M G KPD TFIGLL AC HAGLV
Sbjct: 377 NGMKTEKDLVSWNSMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLV 436
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG YF SM++ YGI P IEH+ C++DLLGR G L EA + P + I+LGTLL
Sbjct: 437 NEGRGYFYSMQRVYGIVPQIEHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLLG 496
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ DV + ++K LF L P+ + LLSN+YA G W +VA RK + D G +K
Sbjct: 497 ACRMHNDVKLATSVSKYLFKLVPSDPGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQKP 556
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S IEV+ +FTV ++SH K G+I M+ L
Sbjct: 557 SGVSSIEVEEEVHEFTVRDWSHPKSGDIYNMIDRL 591
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 8/175 (4%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM-SE 65
S+L C+++ L G +H + L+ + V N +++YAKCG + A +VF+ M +E
Sbjct: 323 SILAACAESGMLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTE 382
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQI 122
++LVSW++MI G G ++E F+ M P+ Y F + AC LV +
Sbjct: 383 KDLVSWNSMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTH-AGLVNEGRG 441
Query: 123 HAYSLKFGYASISFVGN--SLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIA 174
+ YS++ Y + + + ++ + + G+ +A LV FEPN + L+
Sbjct: 442 YFYSMQRVYGIVPQIEHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLLG 496
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 192/571 (33%), Positives = 305/571 (53%), Gaps = 42/571 (7%)
Query: 36 DVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH 95
D+I N +L+ Y K G + AR +F++M E+++VSW+AM+SG Q G A + F QM
Sbjct: 121 DLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM- 179
Query: 96 LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKF----------GYA------------- 132
L+ NE + +SA + +++ + + GY
Sbjct: 180 LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFD 239
Query: 133 ------SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
IS+ N +I+ Y + G S+A ++ E ++ ++ A+++GFV+N ++
Sbjct: 240 RMPVRDKISW--NIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEAT 297
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
+F+ M + + AG ++ S + K L N NT++ Y
Sbjct: 298 RIFEEMPEKNEVSWNAMIAGYVQ----SQQIEKAREL----FDQMPSRNTSSWNTMVTGY 349
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
++ I +A+ F + ++D ISW I+ + E+ L +F +M D G+ +
Sbjct: 350 AQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGI-LNRSAL 408
Query: 307 ASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH 366
A L++CA +A+++ GKQ+H L++ GNAL+ MY KCG I ++ +F ++
Sbjct: 409 ACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITE 468
Query: 367 RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAY 426
+++VSWNT+IA +A H G AL LFE MK T IKPD VT +G+L+AC+H GLV +G Y
Sbjct: 469 KDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEY 527
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRR 486
FNSM + YGI+ + +H+TC+IDLLGRAG+L EA K P D G LL A R+
Sbjct: 528 FNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHG 587
Query: 487 DVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMI 546
D +GE+ A+++F ++P + YVLLSNLYA+ G W +V R ++D G+KK P YS +
Sbjct: 588 DTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWV 647
Query: 547 EVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
E+Q FTV + SH + I L+ L L
Sbjct: 648 EIQNKTHIFTVGDCSHPEAERIYAYLEELDL 678
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 93/175 (53%), Gaps = 4/175 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++ L C++ AL+ G LH ++K G Q I N +L +Y KCG + A VF+++
Sbjct: 407 ALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDI 466
Query: 64 SERNLVSWSAMISGH--HQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQ 121
+E+++VSW+ MI+G+ H G+ LAL +M + P++ +SAC+ + KG +
Sbjct: 467 TEKDIVSWNTMIAGYARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGLVDKGME 526
Query: 122 -IHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIA 174
++ +G + + +I + + G +AL L+ F P+ ++ AL+
Sbjct: 527 YFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLG 581
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 128/300 (42%), Gaps = 54/300 (18%)
Query: 139 NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLL 198
N IS YM+ G AL V+ + V++NA+I+G++ N + + +VF+ M
Sbjct: 64 NRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM------ 117
Query: 199 PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKA 258
PDR DL N +++ Y K + A
Sbjct: 118 PDR--------------DL-------------------ISWNVMLSGYVKNGNLSAARAL 144
Query: 259 FRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
F + EKD++SWN ++ + E+ +F +M + ++ ++ +L+ A
Sbjct: 145 FNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM-----LVKNEISWNGLLS-----AY 194
Query: 319 VQHGKQIHA-HLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
VQ+G+ A L +++ ++ N L+ Y + + + LF+ M R+ +SWN +I
Sbjct: 195 VQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMIT 254
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
+A + L A +LFE++ D + +++ G++ E F M + +S
Sbjct: 255 GYAQNGLLSEARRLFEELPIR----DVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVS 310
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 107/228 (46%), Gaps = 19/228 (8%)
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
E++ + I + D++ WN I+A E LSVF M R T+ ++++
Sbjct: 47 ESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMR-----RRSTVTYNAMISGY 101
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
+++ + ++D+ N +++ Y K G +S + LFN+M ++VVSWN
Sbjct: 102 LSNNKFDCARKVFEKMP----DRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWN 157
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT 433
+++ A + A K+F+QM + + +++ GLL+A G +++ F+S
Sbjct: 158 AMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFDSK--- 210
Query: 434 YGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+ +I + CL+ R +L +A + P+ +D I +++
Sbjct: 211 --MDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPV-RDKISWNIMITG 255
>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
Length = 702
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 194/590 (32%), Positives = 320/590 (54%), Gaps = 23/590 (3%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGI--QPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+ ++ H + A++ G HA LK G+ N +L++YA+ G + A+++F
Sbjct: 17 LRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAG 76
Query: 63 MS--ERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLV 117
+ ++V+W+ M+S Q+G A++ M L P+ FASA+ AC+ ++ L
Sbjct: 77 ATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLD 136
Query: 118 KGQQIHAYSLKFG-YASISFVGNSLISMYM---KVGYSSDALLVYGEAFEPNLVSFNALI 173
G+++HAY +K A+ SFV ++L+ MY +VG + + ++ + L +NA+I
Sbjct: 137 VGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGK-QLGMWNAMI 195
Query: 174 AGFVENQQPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
G+ + E+ +F M + G +P + A L C+ S +H VK +
Sbjct: 196 CGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGM 255
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC---SHCADYEKGLSV 289
N FV N +M +Y++ A + F +++ D++SWNT I C H AD +
Sbjct: 256 AGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVAD---AFQL 312
Query: 290 FKEMSN--DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNM 347
+EM + GV P+ T ++L CA LA+ GK+IH + +R L+ DV VG+ALV+M
Sbjct: 313 AREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDM 372
Query: 348 YAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG-IKPDSVT 406
YAKCG ++ S +F+ + RN ++WN +I A+ H LGG A LF++M A+G +P+ VT
Sbjct: 373 YAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVT 432
Query: 407 FIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKF 466
F+ L AC+H+G+V G F++ME+ +G+ P + C++D+LGRAG+L EA
Sbjct: 433 FMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSM 492
Query: 467 PLGQDPI-VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDV 525
G+ + T+L ACRL R+V +GE ++L L+P S YVLL N+Y++ G W
Sbjct: 493 EAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRA 552
Query: 526 AGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
A R ++ G+ KEP S IEV G +F E +H E++ ++ L
Sbjct: 553 AEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEAL 602
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 197/399 (49%), Gaps = 25/399 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+ +S L CS+ + L G +HA V+K + + V++ ++++YA ++ AR+VFD
Sbjct: 121 TFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDM 180
Query: 63 M--SERNLVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSL 116
+ S + L W+AMI G+ QAG AL F++M +P E AS + ACA ++
Sbjct: 181 VPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAF 240
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
+ +H Y +K G A FV N+L+ MY ++G + A ++ P++VS+N LI G
Sbjct: 241 AGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGC 300
Query: 177 VENQQPEKGFEVFKLMLR---QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE 233
V F++ + M + G++P+ + L C++ +G +H V+ L+
Sbjct: 301 VVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALD 360
Query: 234 SNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM 293
++ VG+ ++ +Y+K + + F + ++ I+WN I A + +F M
Sbjct: 361 TDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRM 420
Query: 294 SNDHGVRPDDFTFASILAACAGLASVQHGKQI-HAHLIRMRLNQDVGVGNA------LVN 346
+ RP++ TF + LAAC+ V G Q+ HA + +D GV +V+
Sbjct: 421 TASGEARPNEVTFMAALAACSHSGMVDRGLQLFHA------MERDHGVEPTPDILACVVD 474
Query: 347 MYAKCGLISCSYKLFNEML--HRNVVSWNTIIAAHANHR 383
+ + G + +Y + M + V +W+T++ A HR
Sbjct: 475 ILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHR 513
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 89/179 (49%), Gaps = 7/179 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A ++ +LL C+ A +G +H ++ + DV V + ++++YAKCG + L+R VFD
Sbjct: 328 AITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFD 387
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLV 117
+ RN ++W+ +I + G A F +M PNE F +A++AC+ +
Sbjct: 388 RLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVD 447
Query: 118 KGQQI-HAYSLKFGYASISFVGNSLISMYMKVGYSSD--ALLVYGEAFEPNLVSFNALI 173
+G Q+ HA G + ++ + + G + A++ EA E + +++ ++
Sbjct: 448 RGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTML 506
>gi|302788234|ref|XP_002975886.1| hypothetical protein SELMODRAFT_104103 [Selaginella moellendorffii]
gi|300156162|gb|EFJ22791.1| hypothetical protein SELMODRAFT_104103 [Selaginella moellendorffii]
Length = 679
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 187/581 (32%), Positives = 322/581 (55%), Gaps = 12/581 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +SLL C ++++L +G +HA ++ G+ D+ + NH++ +Y KCG M AR VF+++
Sbjct: 2 AFASLLQQCGRSRSLPEGRRIHAEIVDTGLGKDLFLGNHLIQMYGKCGAMEEARAVFEKI 61
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
N+ SWS +I G ALE + M + + + + +SAC+ + SL G+
Sbjct: 62 ESPNIFSWSIIIGACVDNGLARRALELYHWMDHEGVRLDMVVLINPVSACSSLGSLDHGR 121
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGE-AFEPNLVSFNALIAGFVEN 179
+ A G+ V NSL++MY K G +A + + A + ++VS+ A+I+GF +
Sbjct: 122 ALEARITSMGFHLHPVVWNSLLNMYCKAGSIDNARKFFQDMAGDQSVVSWTAMISGFALH 181
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAG--GLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ + F+ M+ +G+ P+ +F LE CS N L G LH L + L+S+
Sbjct: 182 GCEDLALDFFRKMVAEGVRPNEVTFVSILALEACSNLNLLAAGKKLHELILDAGLDSS-I 240
Query: 238 VGNTIMALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
V N+++ +Y K + EA + F R + ++LI+W+T IAA S D + LS++K+M +
Sbjct: 241 VRNSLLNMYGKCGGLDEARRVFERCGDCRNLITWSTMIAAYSLNGDGRQALSLYKKMDLE 300
Query: 297 HGVRPDDFTFASILAACA-GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
G+ PD++TF S+L AC+ ++ G+ +H L L + + + AL+NMY + G +
Sbjct: 301 -GLEPDEYTFTSLLDACSIAGDTLTEGRALHRRLEAKGLEKKMVLATALINMYGRYGQLE 359
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ ++F +M H N+V+W +IAA A H A+ L +M G++ D++ F+ +L AC+
Sbjct: 360 DALRVFEKMNHWNLVAWTALIAAFAQHG-NVHAIDLSWRMHLEGVQADNIVFLSVLHACS 418
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
HA +++ G + F M +G+ H++C++DLL R G++ EAEE P + +
Sbjct: 419 HAVVLEAGLSCFQEMVADFGVRGGAAHYSCMVDLLARCGRVAEAEELLHSMPFEPAHMEM 478
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
TLL+ACR+ D G R+A+ L P +PYVL+S+ YA+ W +VA ++ +
Sbjct: 479 KTLLAACRVSGDTPRGARVARLASGLIPHDAAPYVLMSHAYAAVEKWDEVAEVQERMAKL 538
Query: 536 GLKKEPSYSMIEVQGTFEKFTVAEFS-HSKIGEINYMLKTL 575
G+KK +S +EV+ +F FS HS+ EI L+ L
Sbjct: 539 GVKKPRGWSCVEVKNRVHQFFAGNFSWHSEAAEIEVELRRL 579
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 182/560 (32%), Positives = 298/560 (53%), Gaps = 53/560 (9%)
Query: 22 ISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQA 81
+SL + + D + N +L Y + G++ AR++FD +E + +SW+A+++G+ Q
Sbjct: 216 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQR 275
Query: 82 GEHLLALEFFSQMHLLPNEYI--FASAISACAGIQSLVKGQQIHAYSLKFGYASIS--FV 137
+ A + F++M P + + + +S A + + +++ F A I F
Sbjct: 276 SQIEEAQKMFNKM---PQRDVVSWNTMVSGYARRGDMAEARRL------FDVAPIRDVFT 326
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
+++S Y + G +A V+ + N VS+NA++A +V+ + E+ E+F M
Sbjct: 327 WTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAM----- 381
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
C+ N NT++ Y++ ++ EA
Sbjct: 382 -------------------------------PCR---NVASWNTMLTGYAQAGMLDEARA 407
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F ++ +KD +SW +AA S E+ L +FKEM G + FA +L+ CA +A
Sbjct: 408 IFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGR-CGEWVNRSAFACVLSTCADIA 466
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
+++ G Q+H+ LI+ VGNAL+ MY KCG + ++ F EM R+VVSWNT+IA
Sbjct: 467 ALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIA 526
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
+A H G AL++F+ M+ T KPD +T +G+L AC+H+GLV++G +YF SM + +G++
Sbjct: 527 GYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVA 586
Query: 438 PDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQ 497
EH+TC+IDLLGRAG+L EA K P D + G LL A R+ R+ +G A++
Sbjct: 587 TKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEK 646
Query: 498 LFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTV 557
+F L+P YVLLSN+YAS G W DV R ++ + G+KK P +S IEVQ F+V
Sbjct: 647 IFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSV 706
Query: 558 AEFSHSKIGEINYMLKTLSL 577
+ H + +I L+ L +
Sbjct: 707 GDSVHPEREDIYAFLEDLDI 726
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 130/298 (43%), Gaps = 57/298 (19%)
Query: 225 CLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYE 284
C+T K +E N + + + + +AE+ F + + ++NT +A +
Sbjct: 98 CITGKPDMEV--IRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLP 155
Query: 285 KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNAL 344
+ LS F+ + RPD F++ ++L A +GV ++L
Sbjct: 156 QALSFFRSIP-----RPDSFSYNTLLHA-------------------------LGVSSSL 185
Query: 345 VNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDS 404
++ A LF+EM ++ VS+N +I++HANH L A F+ + D+
Sbjct: 186 ADVRA----------LFDEMPVKDSVSYNVMISSHANHGLVSLARHYFD----LAPEKDA 231
Query: 405 VTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTK 464
V++ G+L A G ++E F+S + IS + L+ + ++ EA++
Sbjct: 232 VSWNGMLAAYVRNGRIQEARELFDSRTEWDAIS-----WNALMAGYVQRSQIEEAQKMFN 286
Query: 465 KFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTS-PYVLLSNLYASDGM 521
K P +D + T++S R D+ A++LF + P + + + YA +GM
Sbjct: 287 KMPQ-RDVVSWNTMVSGYARRGDMA----EARRLFDVAPIRDVFTWTAIVSGYAQNGM 339
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 38/226 (16%)
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS----- 294
NT++A Y+ + +A FR I D S+NT + A + ++F EM
Sbjct: 142 NTMLAGYAANGRLPQALSFFRSIPRPDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSV 201
Query: 295 ---------NDHGV------------RPDDFTFASILAACAGLASVQHGKQIHAHLIRMR 333
+HG+ D ++ +LAA +Q ++ L R
Sbjct: 202 SYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARE----LFDSR 257
Query: 334 LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFE 393
D NAL+ Y + I + K+FN+M R+VVSWNT+++ +A A +LF+
Sbjct: 258 TEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLFD 317
Query: 394 QMKATGIKP--DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
+ P D T+ +++ G+++E + F++M +S
Sbjct: 318 ------VAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVS 357
>gi|242057857|ref|XP_002458074.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
gi|241930049|gb|EES03194.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
Length = 963
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 193/572 (33%), Positives = 308/572 (53%), Gaps = 44/572 (7%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQP-DVIVSNHVLNLYAKCGKMILARKVFDEM 63
+S++ + + L++G H +L+ G+ + VSN ++N+YAKCG + A K+F M
Sbjct: 381 LSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSASKIFQLM 440
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIH 123
+ +SW+ +IS Q G LL+ GQQ+H
Sbjct: 441 EATDRISWNTIISALDQNGLKLLS------------------------------AGQQVH 470
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP- 182
++K+G + V N L+ MY + G SD V+ + + VS+N+++ +Q P
Sbjct: 471 CDAVKWGLDLDTSVSNVLVKMYGECGAMSDCWKVFNSMADHDEVSWNSMMGVMASSQAPI 530
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
+ EVF M+R GL+P++ +F L S + L G H +K + + V N +
Sbjct: 531 SETVEVFNNMMRGGLIPNKVTFVNLLAALSPLSVLELGKQFHAAVLKHGVMDDNVVDNAL 590
Query: 243 MALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ Y+K + E F + +D +SWN+ I+ + ++ + M + G
Sbjct: 591 ISCYAKSGDMNSCEHLFSNMSGRRDAVSWNSMISGYIYNGYLQEAMDCVWLMLHS-GQIM 649
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D TF+ IL ACA +A+++ G ++HA IR L DV V +ALV+MY+KCG + + KLF
Sbjct: 650 DCCTFSIILNACASVAALERGMEMHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLF 709
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
N M RN SWN++I+ +A H LG AL+ FE+M + PD VTF+ +L+AC+HAGLV+
Sbjct: 710 NSMTQRNEFSWNSMISGYARHGLGRKALETFEEMLRSRESPDHVTFVSVLSACSHAGLVE 769
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
G YF M +GI P IEH++C+IDLLGRAGK+ + +EY ++ P+ + ++ T+L A
Sbjct: 770 RGLEYFEMMPD-HGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPMKPNALIWRTVLVA 828
Query: 482 CRLRRD---VVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
CR +D + +G + L ++P YVL SN +A+ GMW D A AR ++ + +K
Sbjct: 829 CRQSKDGSKIELGREALRVLLEIEPQNPVNYVLASNFHAATGMWEDTAKARAGMRQATVK 888
Query: 539 KEP----SYSMIEVQGTFEKFTV--AEFSHSK 564
KE +Y I++ KFT+ AE SHSK
Sbjct: 889 KEAGRSWTYLGIQIFRFHFKFTMCSAERSHSK 920
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 192/378 (50%), Gaps = 26/378 (6%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
+LH ++K G+ D+ +SNH++N YAK ++ A +VFDEM +RN VSW+ ++SG+ G
Sbjct: 81 NLHVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTCLLSGYVLQG 140
Query: 83 EHLLALEFFSQM------HLLPNEYIFASAISAC--AGIQSLVKGQQIHAYSLKFGYASI 134
A F M P + F + + AC G L Q+H K YAS
Sbjct: 141 ITEEAFRVFRAMLREVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVHGLLSKTEYASN 200
Query: 135 SFVGNSLISMY--MKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM 192
+ V N+LISMY VG A V+ +L+++NAL++ + + F +F M
Sbjct: 201 TTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVVSTFTLFMDM 260
Query: 193 LRQG----LLPDRFSFAGGLEICSVSNDLRKGMILHCLTV-KCKLESNPFVGNTIMALYS 247
R+ L P +F + S+S+ + ++V K S+ +VG+ +++ ++
Sbjct: 261 QREDSRIQLRPTEHTFGSLITATSLSSGSSAVLDQVFVSVLKSGCSSDLYVGSALVSAFA 320
Query: 248 KFNLIGEAEKAFRLIEEKDLISWNTFIAAC--SHCADYEKGLSVFKEMSNDHGVRPDDFT 305
+ LI EA+ F ++EK+ ++ N I HC+ E+ + +F N V D T
Sbjct: 321 RHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCS--EEAVKIFVGTRNTIVVNAD--T 376
Query: 306 FASILAACAGLA----SVQHGKQIHAHLIRMRLNQ-DVGVGNALVNMYAKCGLISCSYKL 360
+ +L+A A + ++ GK+ H H++R L + V N LVNMYAKCG I + K+
Sbjct: 377 YVVLLSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSASKI 436
Query: 361 FNEMLHRNVVSWNTIIAA 378
F M + +SWNTII+A
Sbjct: 437 FQLMEATDRISWNTIISA 454
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 204/444 (45%), Gaps = 54/444 (12%)
Query: 27 AVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG--HHQAGEH 84
+VLK G D+ V + +++ +A+ G + A+ +F + E+N V+ + +I G E
Sbjct: 299 SVLKSGCSSDLYVGSALVSAFARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEE 358
Query: 85 LLALEFFSQMHLLPNEYIFASAISACAGI----QSLVKGQQIHAYSLKFGYASISF-VGN 139
+ + ++ ++ N + +SA A + L KG++ H + L+ G + V N
Sbjct: 359 AVKIFVGTRNTIVVNADTYVVLLSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSN 418
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
L++MY K G A ++ + +S+N +I+ +N
Sbjct: 419 GLVNMYAKCGAIDSASKIFQLMEATDRISWNTIISALDQN-------------------- 458
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
GL++ S G +HC VK L+ + V N ++ +Y + + + K F
Sbjct: 459 -------GLKLLSA------GQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDCWKVF 505
Query: 260 RLIEEKDLISWNTFIAA-CSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
+ + D +SWN+ + S A + + VF M G+ P+ TF ++LAA + L+
Sbjct: 506 NSMADHDEVSWNSMMGVMASSQAPISETVEVFNNMMRG-GLIPNKVTFVNLLAALSPLSV 564
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML-HRNVVSWNTIIA 377
++ GKQ HA +++ + D V NAL++ YAK G ++ LF+ M R+ VSWN++I+
Sbjct: 565 LELGKQFHAAVLKHGVMDDNVVDNALISCYAKSGDMNSCEHLFSNMSGRRDAVSWNSMIS 624
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME-KTYGI 436
+ + A+ M +G D TF +L AC ++ G ME +GI
Sbjct: 625 GYIYNGYLQEAMDCVWLMLHSGQIMDCCTFSIILNACASVAALERG------MEMHAFGI 678
Query: 437 SPDIEHF----TCLIDLLGRAGKL 456
+E + L+D+ + G++
Sbjct: 679 RSHLESDVVVESALVDMYSKCGRV 702
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 180/383 (46%), Gaps = 29/383 (7%)
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ +H +K G F+ N L++ Y K + A V+ E + N VS+ L++G+V
Sbjct: 80 ENLHVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTCLLSGYVLQ 139
Query: 180 QQPEKGFEVFKLMLRQ---GLLPDRFSFAGGLEICSVSNDLRKGMI--LHCLTVKCKLES 234
E+ F VF+ MLR+ G P F+F L C R G +H L K + S
Sbjct: 140 GITEEAFRVFRAMLREVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVHGLLSKTEYAS 199
Query: 235 NPFVGNTIMALYSKFNLIGE---AEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK 291
N V N ++++Y +G A++ F +DLI+WN ++ + D ++F
Sbjct: 200 NTTVCNALISMYGSCT-VGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVVSTFTLFM 258
Query: 292 EMSNDHG---VRPDDFTFASILAAC---AGLASVQHGKQIHAHLIRMRLNQDVGVGNALV 345
+M + +RP + TF S++ A +G ++V Q+ +++ + D+ VG+ALV
Sbjct: 259 DMQREDSRIQLRPTEHTFGSLITATSLSSGSSAVL--DQVFVSVLKSGCSSDLYVGSALV 316
Query: 346 NMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV 405
+ +A+ GLI + +F + +N V+ N +I A+K+F + T I ++
Sbjct: 317 SAFARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEEAVKIFVGTRNT-IVVNAD 375
Query: 406 TFIGLLTACNHAGLVKEG-----EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
T++ LL+A + +EG EA+ M +T I L+++ + G + A
Sbjct: 376 TYVVLLSAIAEYSIPEEGLRKGKEAH-GHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSA- 433
Query: 461 EYTKKFPL--GQDPIVLGTLLSA 481
+K F L D I T++SA
Sbjct: 434 --SKIFQLMEATDRISWNTIISA 454
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 72/111 (64%), Gaps = 3/111 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S +L+ C+ AL++G+ +HA ++ ++ DV+V + ++++Y+KCG++ A K+F+ M
Sbjct: 653 TFSIILNACASVAALERGMEMHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSM 712
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
++RN SW++MISG+ + G ALE F +M P+ F S +SAC+
Sbjct: 713 TQRNEFSWNSMISGYARHGLGRKALETFEEMLRSRESPDHVTFVSVLSACS 763
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 184/547 (33%), Positives = 292/547 (53%), Gaps = 20/547 (3%)
Query: 34 QPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQ 93
+ DV N +L+ YA+ G + AR VFD M E+N VSW+A++S + Q + A F
Sbjct: 154 ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKS 213
Query: 94 MHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV--GNSLISMYMKVGYS 151
+ +S + VK ++I F ++ V N++I+ Y + G
Sbjct: 214 RENW-------ALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKI 266
Query: 152 SDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEIC 211
+A ++ E+ ++ ++ A+++G+++N+ E+ E+F M P+R + +
Sbjct: 267 DEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM------PERNEVSWNAMLA 320
Query: 212 SVSNDLRKGMILHCLTV-KCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISW 270
R M V C+ N NT++ Y++ I EA+ F + ++D +SW
Sbjct: 321 GYVQGERMEMAKELFDVMPCR---NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSW 377
Query: 271 NTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLI 330
IA S + L +F +M + G R + +F+S L+ CA + +++ GKQ+H L+
Sbjct: 378 AAMIAGYSQSGHSFEALRLFVQMEREGG-RLNRSSFSSALSTCADVVALELGKQLHGRLV 436
Query: 331 RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALK 390
+ VGNAL+ MY KCG I + LF EM +++VSWNT+IA ++ H G AL+
Sbjct: 437 KGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALR 496
Query: 391 LFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLL 450
FE MK G+KPD T + +L+AC+H GLV +G YF +M + YG+ P+ +H+ C++DLL
Sbjct: 497 FFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLL 556
Query: 451 GRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYV 510
GRAG L +A K P D + GTLL A R+ + + E A ++F ++P + YV
Sbjct: 557 GRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYV 616
Query: 511 LLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINY 570
LLSNLYAS G WGDV R ++D G+KK P YS IE+Q F+V + H + EI
Sbjct: 617 LLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFA 676
Query: 571 MLKTLSL 577
L+ L L
Sbjct: 677 FLEELDL 683
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 183/407 (44%), Gaps = 25/407 (6%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
H + Q S +LK G D+ N ++ Y + G+ A +VF M +
Sbjct: 37 FHSLKRATQTQIQKSQTKPLLKCG-DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSS 95
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
VS++ MISG+ + GE LA + F +M P + + + +++ G+ + +
Sbjct: 96 VSYNGMISGYLRNGEFELARKLFDEM---PERDLVSWNVMIKGYVRNRNLGKARELFEIM 152
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
S+ N+++S Y + G DA V+ E N VS+NAL++ +V+N + E+ +
Sbjct: 153 PERDVCSW--NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACML 210
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG-NTIMALYS 247
FK R ++A C + ++K I+ + V NTI+ Y+
Sbjct: 211 FK---------SRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYA 261
Query: 248 KFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFA 307
+ I EA + F +D+ +W ++ E+ +F +M + V ++
Sbjct: 262 QSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEV-----SWN 316
Query: 308 SILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR 367
++LA ++ K+ L + ++V N ++ YA+CG IS + LF++M R
Sbjct: 317 AMLAGYVQGERMEMAKE----LFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR 372
Query: 368 NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ VSW +IA ++ AL+LF QM+ G + + +F L+ C
Sbjct: 373 DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTC 419
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 89/176 (50%), Gaps = 5/176 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S SS L C+ AL+ G LH ++K G + V N +L +Y KCG + A +F EM
Sbjct: 411 SFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM 470
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+ +++VSW+ MI+G+ + G +AL FF M L P++ + +SAC+ + KG+
Sbjct: 471 AGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGR 530
Query: 121 Q-IHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIA 174
Q + + +G S ++ + + G DA L+ FEP+ + L+
Sbjct: 531 QYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLG 586
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 107/264 (40%), Gaps = 23/264 (8%)
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
N ++ Y + EA + F+ + +S+N I+ ++E +F EM V
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV 127
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+ + G A L + +DV N +++ YA+ G + +
Sbjct: 128 SWNVMIKGYVRNRNLGKAR---------ELFEIMPERDVCSWNTMLSGYAQNGCVDDARS 178
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F+ M +N VSWN +++A+ + A LF+ + + V++ LL
Sbjct: 179 VFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGGFVKKKK 234
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
+ E +F+SM D+ + +I ++GK+ EA + + P+ QD ++
Sbjct: 235 IVEARQFFDSMN-----VRDVVSWNTIITGYAQSGKIDEARQLFDESPV-QDVFTWTAMV 288
Query: 480 SACRLRRDVVIGERLAKQLFHLQP 503
S R V A++LF P
Sbjct: 289 SGYIQNRMV----EEARELFDKMP 308
>gi|302764012|ref|XP_002965427.1| hypothetical protein SELMODRAFT_84339 [Selaginella moellendorffii]
gi|300166241|gb|EFJ32847.1| hypothetical protein SELMODRAFT_84339 [Selaginella moellendorffii]
Length = 495
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 170/490 (34%), Positives = 272/490 (55%), Gaps = 14/490 (2%)
Query: 39 VSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH--- 95
V N +LN+Y KCG + AR+ F+ M+ RN++SWS M++ + Q G+H AL F +M
Sbjct: 12 VGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEEG 71
Query: 96 LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL 155
+ PNE F S + ACA +++ +G+ IH + + VG +L+ MY K +A
Sbjct: 72 VEPNEVTFLSVLDACANAEAVEQGEMIHRLAARKKLDVGLIVGTALVGMYGKCSRLIEAR 131
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN 215
V+ E ++V+++ +I+ + + + ++F M G+ P+ L CS +
Sbjct: 132 QVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILMSILGACSSAG 191
Query: 216 DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIA 275
L +G + H L V C ++ GNT++ +Y K + A+ F +E +DLISW+ +A
Sbjct: 192 ALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLISWSAMLA 251
Query: 276 ACS---HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
+ HC D F+ M + GV+PD TF S+L AC+ L ++ G IH +
Sbjct: 252 VIAEHGHCKD---AFVHFRRMDLE-GVKPDYVTFVSLLDACSLLGALVEGNVIHTRIRAE 307
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
+ + N+L++MY KCG + + +F+ M HRNV++W T+I A H G AL+LF
Sbjct: 308 GFQSVMYIENSLIDMYGKCGSLQAARGIFDRMSHRNVITWTTMITACVQHEQGKEALELF 367
Query: 393 EQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
E+M+ G++PD V F+ ++ +C+H+GLV+EG YF M + +P +EHF ++DLLGR
Sbjct: 368 EEMEKAGVQPDQVAFLSIIHSCSHSGLVEEGRIYFLKMVEDQSFTPGVEHFVGMLDLLGR 427
Query: 453 AGKLLEAEEYTKKFPLGQDPIVLG--TLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYV 510
+GKL EAEE + P+ +P V+G TLLSAC+ D R+A + L P PYV
Sbjct: 428 SGKLNEAEELMEFMPV--EPGVVGWNTLLSACKTHNDTERAGRVAGGMLVLGPGHAGPYV 485
Query: 511 LLSNLYASDG 520
SN+ + G
Sbjct: 486 SFSNILSGKG 495
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 182/347 (52%), Gaps = 3/347 (0%)
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
FVGNSL++MY K G +A + N++S++ ++A + + ++ +F+ M +
Sbjct: 11 FVGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEE 70
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
G+ P+ +F L+ C+ + + +G ++H L + KL+ VG ++ +Y K + + EA
Sbjct: 71 GVEPNEVTFLSVLDACANAEAVEQGEMIHRLAARKKLDVGLIVGTALVGMYGKCSRLIEA 130
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
+ F I EKD+++W+T I+A + + + +F M+ D GVRP++ SIL AC+
Sbjct: 131 RQVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNLD-GVRPNEIILMSILGACSS 189
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
++ GK H ++ DV GN L+ MY KCG ++ + +F M R+++SW+ +
Sbjct: 190 AGALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLISWSAM 249
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYG 435
+A A H A F +M G+KPD VTF+ LL AC+ G + EG + + G
Sbjct: 250 LAVIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGNVIHTRI-RAEG 308
Query: 436 ISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
+ LID+ G+ G L A + ++ I T+++AC
Sbjct: 309 FQSVMYIENSLIDMYGKCGSLQAARGIFDRMS-HRNVITWTTMITAC 354
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 202/384 (52%), Gaps = 12/384 (3%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C+ +A++QG +H + + +IV ++ +Y KC ++I AR+VFD + E+
Sbjct: 81 SVLDACANAEAVEQGEMIHRLAARKKLDVGLIVGTALVGMYGKCSRLIEARQVFDGIVEK 140
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIH 123
++V+WS MIS + Q G A++ F M+L PNE I S + AC+ +L +G+ H
Sbjct: 141 DVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILMSILGACSSAGALAEGKMTH 200
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ G+ + GN+LI MY K G + A V+G +L+S++A++A E+ +
Sbjct: 201 ELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLISWSAMLAVIAEHGHCK 260
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
F F+ M +G+ PD +F L+ CS+ L +G ++H +S ++ N+++
Sbjct: 261 DAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGNVIHTRIRAEGFQSVMYIENSLI 320
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y K + A F + +++I+W T I AC ++ L +F+EM GV+PD
Sbjct: 321 DMYGKCGSLQAARGIFDRMSHRNVITWTTMITACVQHEQGKEALELFEEMEK-AGVQPDQ 379
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG----NALVNMYAKCGLISCSYK 359
F SI+ +C+ V+ G+ + ++M +Q G ++++ + G ++ + +
Sbjct: 380 VAFLSIIHSCSHSGLVEEGR---IYFLKMVEDQSFTPGVEHFVGMLDLLGRSGKLNEAEE 436
Query: 360 LFNEM-LHRNVVSWNTIIAAHANH 382
L M + VV WNT+++A H
Sbjct: 437 LMEFMPVEPGVVGWNTLLSACKTH 460
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 145/286 (50%), Gaps = 9/286 (3%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L CS AL +G H V+ G DV N ++ +Y KCG + A+ VF M R
Sbjct: 182 SILGACSSAGALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERR 241
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIH 123
+L+SWSAM++ + G A F +M L P+ F S + AC+ + +LV+G IH
Sbjct: 242 DLISWSAMLAVIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGNVIH 301
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
G+ S+ ++ NSLI MY K G A ++ N++++ +I V+++Q +
Sbjct: 302 TRIRAEGFQSVMYIENSLIDMYGKCGSLQAARGIFDRMSHRNVITWTTMITACVQHEQGK 361
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES---NPFVGN 240
+ E+F+ M + G+ PD+ +F + CS S + +G I V+ + + FVG
Sbjct: 362 EALELFEEMEKAGVQPDQVAFLSIIHSCSHSGLVEEGRIYFLKMVEDQSFTPGVEHFVG- 420
Query: 241 TIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEK 285
++ L + + EAE+ + E ++ WNT ++AC D E+
Sbjct: 421 -MLDLLGRSGKLNEAEELMEFMPVEPGVVGWNTLLSACKTHNDTER 465
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
SLL CS AL +G +H + G Q + + N ++++Y KCG + AR +FD MS R
Sbjct: 283 SLLDACSLLGALVEGNVIHTRIRAEGFQSVMYIENSLIDMYGKCGSLQAARGIFDRMSHR 342
Query: 67 NLVSWSAMISG--HHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQ 121
N+++W+ MI+ H+ G+ ALE F +M + P++ F S I +C+ LV+ +
Sbjct: 343 NVITWTTMITACVQHEQGKE--ALELFEEMEKAGVQPDQVAFLSIIHSCSH-SGLVEEGR 399
Query: 122 IHAYSL----KFGYASISFVGNSLISMYMKVGYSSDA-LLVYGEAFEPNLVSFNALIAGF 176
I+ + F FVG ++ + + G ++A L+ EP +V +N L++
Sbjct: 400 IYFLKMVEDQSFTPGVEHFVG--MLDLLGRSGKLNEAEELMEFMPVEPGVVGWNTLLSAC 457
Query: 177 VENQQPEKGFEVFKLMLRQG 196
+ E+ V ML G
Sbjct: 458 KTHNDTERAGRVAGGMLVLG 477
>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Brachypodium distachyon]
Length = 631
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 169/471 (35%), Positives = 272/471 (57%), Gaps = 5/471 (1%)
Query: 102 IFASAISA----CAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV 157
I SAIS CA +SL+ G+ H ++ FG + + N LI++Y K G + A LV
Sbjct: 55 IDVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLV 114
Query: 158 YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDL 217
+ ++VS+N +IAG+ + + + ++F M R+G F+ + + C+ +
Sbjct: 115 FDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAI 174
Query: 218 RKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAAC 277
+ LH + +K L+SN FVG I+ +Y+K N+I +A F + E+ L++W++ A
Sbjct: 175 NECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGY 234
Query: 278 SHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD 337
+E+ L +F+ + GV +FT ++IL+ACA LA G Q+HA +++ + +
Sbjct: 235 VQNGLHEEALHLFR-CAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGN 293
Query: 338 VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKA 397
V +LV++YA+CG I +Y LF M H+NVV WN +IA+ + H A+ LFE+M+
Sbjct: 294 FFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQ 353
Query: 398 TGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLL 457
GI P+ VT++ +L+ C+HAGLV++G YF+ + + P++ H++C++D+LGR+GK
Sbjct: 354 LGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTD 413
Query: 458 EAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYA 517
EA E K P + G+LL +CR ++ + A+QLF L+P +VLLSN+YA
Sbjct: 414 EAWELLNKMPFEPTASMWGSLLGSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLSNVYA 473
Query: 518 SDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
+ G W +V ARK LKDSG KKE S IE +G F V E H +I +I
Sbjct: 474 ASGNWENVLMARKYLKDSGAKKEMGRSWIEAKGKVHVFVVGERKHPRITDI 524
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 224/410 (54%), Gaps = 16/410 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+IS L C+K K+L G S H + G+ D + N ++NLY KCG+ AR VFD M
Sbjct: 59 AISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIM 118
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
R++VSW+ MI+G+ +GE + AL+ FS+MH +E+ +S I ACA ++ + +
Sbjct: 119 HVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECK 178
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H +LK S SFVG +++ +Y K DA V+ + E LV++++L AG+V+N
Sbjct: 179 QLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNG 238
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E+ +F+ R+G+ F+ + L C+ +G+ LH + +KC N FV
Sbjct: 239 LHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAA 298
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +Y++ I +A F +E K+++ WN IA+ S A + + +F++M G+
Sbjct: 299 SLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKM-QQLGIF 357
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMR-LNQDVGVGNALVNMYAKCGLISCSYK 359
P++ T+ S+L+ C+ V+ G+ + L+ R + +V + +V++ + G +++
Sbjct: 358 PNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWE 417
Query: 360 LFNEMLHRNVVS-WNTIIAAHANH---RLGG-SALKLFEQMKATGIKPDS 404
L N+M S W +++ + N+ RL +A +LF+ ++PD+
Sbjct: 418 LLNKMPFEPTASMWGSLLGSCRNYNNIRLARIAAEQLFQ------LEPDN 461
>gi|255561305|ref|XP_002521663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539054|gb|EEF40650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 578
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 175/547 (31%), Positives = 303/547 (55%), Gaps = 6/547 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
I S++ CS + GI L++ VLK G+ D ++ N ++ YAK A KVFD M
Sbjct: 29 IPSVIKACSFSNCHHFGIQLYSIVLKSGLDSDFVICNSFISFYAKSSCTESALKVFDTMP 88
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQ 121
++ +SW+ +I+G+ Q G F +M+ ++P + AS +S C + + G+
Sbjct: 89 LKDPISWNCIINGYFQNGYFTQGFIMFKEMYECGIVPKPELVASVVSVCVRLGDMKLGRA 148
Query: 122 IHAYSLKFG-YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IHA L G A FV SL+ Y K G S AL V+ + N+VS+ AL++G N
Sbjct: 149 IHALVLIDGRIAKEIFVLTSLVDWYFKSGDSLMALRVFDQIEVKNVVSWTALVSGCSANL 208
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ F+ M G+ P+R + L + + G +H + + + +
Sbjct: 209 DYNMALDCFRAMQINGVRPNRVTLIAILPAFAELGCAKTGKEIHGYAFRHGFDLDHHFLS 268
Query: 241 TIMALYSKFNL-IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+++ +Y + + A+ F KD++ W++ I + AD + L +F+ M D G
Sbjct: 269 SLIHIYCRSREGLQLAKLTFERSNVKDVVMWSSIIGSYCRSADSIEALKLFRWMRAD-GT 327
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
P+ T +++ AC L S+++G H ++++ LN D +GNAL+NMY+KCG + S++
Sbjct: 328 EPNSVTLLAVITACTTLTSLKNGYGTHGYIVKCGLNFDTYIGNALINMYSKCGCVVASHQ 387
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F EM ++ VSW+T+I A+ H G AL LF +M+ G++PD++TF+ +L+ACNH+GL
Sbjct: 388 IFKEMHIKDSVSWSTLITAYGLHGHGKEALCLFHEMQLQGVEPDAMTFLAVLSACNHSGL 447
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
VKEG+ F++++K +S +EH+ CL+DLLG++GK+ +A + + P+ + +L+
Sbjct: 448 VKEGQQIFDNVKKDGKVSLTVEHYACLVDLLGKSGKVDDAFDILRAMPMKPSTTIWSSLV 507
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
SAC++ + I ERLA++L +P+ + + LLS +YA G W V R++++ GL K
Sbjct: 508 SACKIHGRLEIAERLAQELIKSEPSNAANHTLLSMIYAESGNWFAVEDVRRLMRVQGLSK 567
Query: 540 EPSYSMI 546
+S +
Sbjct: 568 CYGFSQV 574
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 198/400 (49%), Gaps = 10/400 (2%)
Query: 88 LEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISM 144
L+F+ ++H + N YI S I AC+ G Q+++ LK G S + NS IS
Sbjct: 11 LKFYKELHSSDIYANAYIIPSVIKACSFSNCHHFGIQLYSIVLKSGLDSDFVICNSFISF 70
Query: 145 YMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSF 204
Y K + AL V+ + +S+N +I G+ +N +GF +FK M G++P
Sbjct: 71 YAKSSCTESALKVFDTMPLKDPISWNCIINGYFQNGYFTQGFIMFKEMYECGIVPKPELV 130
Query: 205 AGGLEICSVSNDLRKGMILHCLT-VKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIE 263
A + +C D++ G +H L + ++ FV +++ Y K A + F IE
Sbjct: 131 ASVVSVCVRLGDMKLGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDSLMALRVFDQIE 190
Query: 264 EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGK 323
K+++SW ++ CS DY L F+ M + GVRP+ T +IL A A L + GK
Sbjct: 191 VKNVVSWTALVSGCSANLDYNMALDCFRAMQIN-GVRPNRVTLIAILPAFAELGCAKTGK 249
Query: 324 QIHAHLIRMRLNQDVGVGNALVNMYAKC--GLISCSYKLFNEMLHRNVVSWNTIIAAHAN 381
+IH + R + D ++L+++Y + GL + F ++VV W++II ++
Sbjct: 250 EIHGYAFRHGFDLDHHFLSSLIHIYCRSREGL-QLAKLTFERSNVKDVVMWSSIIGSYCR 308
Query: 382 HRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIE 441
ALKLF M+A G +P+SVT + ++TAC +K G + K G++ D
Sbjct: 309 SADSIEALKLFRWMRADGTEPNSVTLLAVITACTTLTSLKNGYGTHGYIVKC-GLNFDTY 367
Query: 442 HFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
LI++ + G ++ + + K+ + +D + TL++A
Sbjct: 368 IGNALINMYSKCGCVVASHQIFKEMHI-KDSVSWSTLITA 406
>gi|302791537|ref|XP_002977535.1| hypothetical protein SELMODRAFT_106750 [Selaginella moellendorffii]
gi|300154905|gb|EFJ21539.1| hypothetical protein SELMODRAFT_106750 [Selaginella moellendorffii]
Length = 545
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 184/562 (32%), Positives = 298/562 (53%), Gaps = 46/562 (8%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
L C L G+ +H+ + + G+Q D+++SN ++N+Y KCG + A ++F + +
Sbjct: 17 LGACQDPSRLAAGVGIHSRITEAGLQGDIVISNALVNMYGKCGALESACEIFHGVPRNDA 76
Query: 69 VSWSAMISGHHQAG-EHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
+SW+ MIS + Q G ALE F +MH L PN+ F + +SA +G + L +G++IH
Sbjct: 77 ISWNGMISLYAQDGHSREEALELFRRMHGEGLTPNKVTFLAILSAVSGARGLEEGRKIHT 136
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYG---EAFEPNLVSFNALIAGFVENQQ 181
++ GY+ VGN+LI MY K G DA + E +P+LV + A+IA + +
Sbjct: 137 QVVESGYSGELSVGNALIDMYSKCGSLEDARKTFAGMDEKNKPDLVLWTAMIAAYAGHGD 196
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
++ FE+F+ M QGL PD+ S +GN
Sbjct: 197 YKEAFELFQQMQDQGLKPDK--------------------------------SLVSIGNA 224
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
I+ +Y K + +A K F ++E+D +SW T IA + + L +FK M + V P
Sbjct: 225 IVHMYGKCGNVADARKMFDKMKERDTVSWTTMIAVYAEHGYDREALQIFKVMLLE-SVAP 283
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQ-DVGVGNALVNMYAKCGLISCSYKL 360
D T ++L AC+ ++ + G+ ++ + ++ D+ +GNA+ M+ CG + + ++
Sbjct: 284 DKVTLINVLDACSNVSGLAQGRLVYKQFVESGAHELDLVLGNAVARMFGSCGSLREAREI 343
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F + R+VVSWN +I A+A H +L+LF +M +KPD VTF+G+L+AC+H GLV
Sbjct: 344 FESLAARDVVSWNCLITAYAQHGSFEESLRLFRRMLEECVKPDEVTFVGVLSACSHGGLV 403
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT-LL 479
+G +F SM + Y I + H+ C++DLLGRAG+L EAEE + P V+ T LL
Sbjct: 404 ADGCQFFVSMVQDYQIPAEEIHYGCMVDLLGRAGRLAEAEELLSRLPCAATNDVMWTSLL 463
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS---- 535
S+C+L D+ G+R AK+L + P S + L+ ++A+ G W + RK + +
Sbjct: 464 SSCKLHSDLDRGKRAAKKLLAMVPGDPSHLLALATIHAASGEWKEAMRIRKEVMERCSGA 523
Query: 536 GLKKEPSYSMIEVQGTFEKFTV 557
S IEV G KF V
Sbjct: 524 ARGGAGGMSRIEVNGQVHKFVV 545
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 181/388 (46%), Gaps = 38/388 (9%)
Query: 98 PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLV 157
P+ +A+ AC L G IH+ + G + N+L++MY K G A +
Sbjct: 8 PDRVALIAALGACQDPSRLAAGVGIHSRITEAGLQGDIVISNALVNMYGKCGALESACEI 67
Query: 158 YGEAFEPNLVSFNALIAGFVEN-QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSND 216
+ + +S+N +I+ + ++ E+ E+F+ M +GL P++ +F L S +
Sbjct: 68 FHGVPRNDAISWNGMISLYAQDGHSREEALELFRRMHGEGLTPNKVTFLAILSAVSGARG 127
Query: 217 LRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK---DLISWNTF 273
L +G +H V+ VGN ++ +YSK + +A K F ++EK DL+ W
Sbjct: 128 LEEGRKIHTQVVESGYSGELSVGNALIDMYSKCGSLEDARKTFAGMDEKNKPDLVLWTAM 187
Query: 274 IAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR 333
IAA + DY++ +F++M D G++PD
Sbjct: 188 IAAYAGHGDYKEAFELFQQM-QDQGLKPDKSL---------------------------- 218
Query: 334 LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFE 393
V +GNA+V+MY KCG ++ + K+F++M R+ VSW T+IA +A H AL++F+
Sbjct: 219 ----VSIGNAIVHMYGKCGNVADARKMFDKMKERDTVSWTTMIAVYAEHGYDREALQIFK 274
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 453
M + PD VT I +L AC++ + +G + ++ D+ + + G
Sbjct: 275 VMLLESVAPDKVTLINVLDACSNVSGLAQGRLVYKQFVESGAHELDLVLGNAVARMFGSC 334
Query: 454 GKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
G L EA E + +D + L++A
Sbjct: 335 GSLREAREIFESLA-ARDVVSWNCLITA 361
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 150/301 (49%), Gaps = 16/301 (5%)
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
M QG+ PDR + L C + L G+ +H + L+ + + N ++ +Y K
Sbjct: 1 MQLQGVAPDRVALIAALGACQDPSRLAAGVGIHSRITEAGLQGDIVISNALVNMYGKCGA 60
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCA-DYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
+ A + F + D ISWN I+ + E+ L +F+ M + G+ P+ TF +IL
Sbjct: 61 LESACEIFHGVPRNDAISWNGMISLYAQDGHSREEALELFRRMHGE-GLTPNKVTFLAIL 119
Query: 311 AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN-- 368
+A +G ++ G++IH ++ + ++ VGNAL++MY+KCG + + K F M +N
Sbjct: 120 SAVSGARGLEEGRKIHTQVVESGYSGELSVGNALIDMYSKCGSLEDARKTFAGMDEKNKP 179
Query: 369 -VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPD-SVTFIG--LLTACNHAGLVKEGE 424
+V W +IAA+A H A +LF+QM+ G+KPD S+ IG ++ G V +
Sbjct: 180 DLVLWTAMIAAYAGHGDYKEAFELFQQMQDQGLKPDKSLVSIGNAIVHMYGKCGNVADAR 239
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPL---GQDPIVLGTLLSA 481
F+ M++ +S +T +I + G EA + K L D + L +L A
Sbjct: 240 KMFDKMKERDTVS-----WTTMIAVYAEHGYDREALQIFKVMLLESVAPDKVTLINVLDA 294
Query: 482 C 482
C
Sbjct: 295 C 295
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 124/260 (47%), Gaps = 12/260 (4%)
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
GV PD + L AC + + G IH+ + L D+ + NALVNMY KCG +
Sbjct: 4 QGVAPDRVALIAALGACQDPSRLAAGVGIHSRITEAGLQGDIVISNALVNMYGKCGALES 63
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHA-NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ ++F+ + + +SWN +I+ +A + AL+LF +M G+ P+ VTF+ +L+A +
Sbjct: 64 ACEIFHGVPRNDAISWNGMISLYAQDGHSREEALELFRRMHGEGLTPNKVTFLAILSAVS 123
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDP-IV 474
A ++EG + ++ G S ++ LID+ + G L +A + P +V
Sbjct: 124 GARGLEEGRKIHTQVVES-GYSGELSVGNALIDMYSKCGSLEDARKTFAGMDEKNKPDLV 182
Query: 475 LGTLLSAC-----RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGAR 529
L T + A + + +++ Q + S + ++Y G G+VA AR
Sbjct: 183 LWTAMIAAYAGHGDYKEAFELFQQMQDQGLKPDKSLVSIGNAIVHMY---GKCGNVADAR 239
Query: 530 KMLKDSGLKKEPSY-SMIEV 548
KM + S+ +MI V
Sbjct: 240 KMFDKMKERDTVSWTTMIAV 259
>gi|297833250|ref|XP_002884507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330347|gb|EFH60766.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 676
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 189/567 (33%), Positives = 298/567 (52%), Gaps = 13/567 (2%)
Query: 21 GISLHAAVLKMG-----IQPDV-----IVSNHVLNLYAKCGKMILARKVFDEMSERNLVS 70
G LHA+++K + D+ +V N +L+LY KCGK+ A K+FDEM R+++S
Sbjct: 64 GPCLHASIVKNPEFFDPVDADIHRNALVVWNSLLSLYVKCGKLGDALKLFDEMPVRDVIS 123
Query: 71 WSAMISGHHQAGEHLLALEFFSQMHLLP--NEYIFASAISACAGIQSLVKGQQIHAYSLK 128
+ + G + E +M ++ +S C + + + IHA ++
Sbjct: 124 QNIVFYGFLRNRETESGFVLLKRMLGSGGFDQATLTIVLSVCDTPEFCLVTKMIHALAIL 183
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
GY VGN LI+ Y K G S V+ E N++++ A+I+G +EN+ E G +
Sbjct: 184 SGYDKEISVGNKLITSYFKCGCSVSGRWVFSEMAHRNVITWTAVISGLIENELHEDGLRL 243
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSK 248
F LM R + P+ ++ L CS S + +G +H L K +ES + + +M +YSK
Sbjct: 244 FCLMRRGLVHPNSVTYLSALAACSGSQMIVEGQQIHALLWKFGIESELCIESALMDMYSK 303
Query: 249 FNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFAS 308
I +A K F +E D +S + + E+ + F M GV D ++
Sbjct: 304 CGSIEDAWKIFESSQEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQA-GVEIDANVVSA 362
Query: 309 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
IL S+ GKQ+H+ +I+ + + V N L+NMY+KCG ++ S +F M RN
Sbjct: 363 ILGVSFVDNSLGLGKQLHSLVIKRKFCGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRN 422
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
VSWN++IAA A H G +ALKL+E+M +KP VTF+ LL AC+H GL+ +G N
Sbjct: 423 YVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLN 482
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDV 488
M++ +GI P EH+TC+ID+LGRAG + EA+ + PL D + LL AC D
Sbjct: 483 EMKEVHGIKPRTEHYTCIIDMLGRAGLMKEAKSFIDSLPLKPDCKIWQALLGACSFHGDT 542
Query: 489 VIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEV 548
+GE A+QLF P +++ ++L++N+Y+S G W + A K +K+ G+ KE S IE+
Sbjct: 543 EVGEYAAEQLFETAPDSSAAHILMANIYSSRGKWKERAKTIKRMKEMGVTKETGISWIEM 602
Query: 549 QGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ F V + H + I +L L
Sbjct: 603 EKKTHSFVVEDKMHPQAEAIYDVLSGL 629
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 144/287 (50%), Gaps = 9/287 (3%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S L CS ++ + +G +HA + K GI+ ++ + + ++++Y+KCG + A K+F+ E
Sbjct: 261 SALAACSGSQMIVEGQQIHALLWKFGIESELCIESALMDMYSKCGSIEDAWKIFESSQEV 320
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGI----QSLVKGQQI 122
+ VS + ++ G Q G A++FF +M L I A+ +SA G+ SL G+Q+
Sbjct: 321 DEVSMTVILVGLAQNGSEEEAIQFFIRM-LQAGVEIDANVVSAILGVSFVDNSLGLGKQL 379
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H+ +K + +FV N LI+MY K G +D+ V+ + N VS+N++IA F +
Sbjct: 380 HSLVIKRKFCGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHG 439
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVGNT 241
++++ M + P +F L CS + KG +L+ + ++
Sbjct: 440 LAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIKPRTEHYTC 499
Query: 242 IMALYSKFNLIGEAEKAF--RLIEEKDLISWNTFIAACSHCADYEKG 286
I+ + + L+ EA K+F L + D W + ACS D E G
Sbjct: 500 IIDMLGRAGLMKEA-KSFIDSLPLKPDCKIWQALLGACSFHGDTEVG 545
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 70/124 (56%), Gaps = 3/124 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A +S++L +L G LH+ V+K + V+N ++N+Y+KCG + ++ VF
Sbjct: 357 ANVVSAILGVSFVDNSLGLGKQLHSLVIKRKFCGNTFVNNGLINMYSKCGDLTDSQTVFR 416
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVK 118
M +RN VSW++MI+ + G L AL+ + +M L P + F S + AC+ + + K
Sbjct: 417 RMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDK 476
Query: 119 GQQI 122
G+++
Sbjct: 477 GREL 480
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 180/513 (35%), Positives = 277/513 (53%), Gaps = 5/513 (0%)
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQI 122
R +V+W+A+ISG Q G AL +FS+M ++ PN++ F A A + G+QI
Sbjct: 21 RCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCAFKASTALCLPFAGKQI 80
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
HA +LK G + FVG S MY K G +A ++ E N+ +NA I+ V + +P
Sbjct: 81 HAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGRP 140
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
K + F R G PD +F L C+ + L G LH L ++ E + V N I
Sbjct: 141 GKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGI 200
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y K + AE F + ++ +SW T +AAC + EK VF M G+
Sbjct: 201 IDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFL-MGRKEGIELT 259
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
D+ +S+++A AG++ ++ G+ +HA ++ + D+ VG+ALV+MY KCG I ++F+
Sbjct: 260 DYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFH 319
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
EM RN+VSWN +I+ +A+ A+ LFE+M++ + + VT I +L+AC+ G VK
Sbjct: 320 EMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAVA-NYVTLICVLSACSRGGAVKL 378
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G F SM Y I P EH+ C+ D+LGRAG + A E+ +K P+ V G LL+AC
Sbjct: 379 GNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNAC 438
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
R+ + +G+ A LF L P + +VLLSN++A+ G W + RK +KD G+KK
Sbjct: 439 RVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGRWDEATLVRKEMKDVGIKKGAG 498
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
S + + F + SH + EI ML L
Sbjct: 499 CSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKL 531
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 179/363 (49%), Gaps = 7/363 (1%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G +HA LK+G D V ++Y+K G A+++FDEM RN+ W+A IS
Sbjct: 77 GKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVL 136
Query: 81 AGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
G A++ F + + P+ F + ++ACA + L G+Q+H ++ G+ V
Sbjct: 137 DGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSV 196
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
N +I +Y K A +V+ N VS+ ++A +N + EK VF + ++G+
Sbjct: 197 ANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGI 256
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
+ + + + + L G +H L VK +E + FVG+ ++ +Y K I + E+
Sbjct: 257 ELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQ 316
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F + E++L+SWN I+ +H D + +++F+EM ++ + T +L+AC+
Sbjct: 317 VFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSE--AVANYVTLICVLSACSRGG 374
Query: 318 SVQHGKQIHAHLI-RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS-WNTI 375
+V+ G +I + R R+ + +M + G++ +Y+ +M R +S W +
Sbjct: 375 AVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGAL 434
Query: 376 IAA 378
+ A
Sbjct: 435 LNA 437
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 185/413 (44%), Gaps = 41/413 (9%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + L+ C+ + L G LH V++ G + DV V+N ++++Y KC ++ LA VF+ M
Sbjct: 161 TFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGM 220
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFF---SQMHLLPNEYIFASAISACAGIQSLVKGQ 120
RN VSW M++ Q E A F + + +Y+ +S ISA AGI L G+
Sbjct: 221 GRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGR 280
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+HA ++K FVG++L+ MY K G D V+ E E NLVS+NA+I+G+
Sbjct: 281 SVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQG 340
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKG-MILHCLTVKCKLESNPFVG 239
+ +F+ M + + + + L CS ++ G I + + ++E
Sbjct: 341 DVDMAMTLFEEMQSEA-VANYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHY 399
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEE---KDLIS-WNTFIAACSHCADYEKGL----SVFK 291
I + + ++ E+A+ +++ + IS W + AC + E G ++FK
Sbjct: 400 ACIADMLGRAGMV---ERAYEFVQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFK 456
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
D G + +++ AA G+ A L+R + +DVG+
Sbjct: 457 LDPKDSG---NHVLLSNMFAAA--------GRWDEATLVRKEM-KDVGIKKG-------- 496
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDS 404
CS+ +H V + N + +KL +M+A G PD+
Sbjct: 497 --AGCSWVTAKNKVH---VFQAKDTSHERNSEIQAMLVKLRTEMQAAGYMPDT 544
>gi|302788478|ref|XP_002976008.1| hypothetical protein SELMODRAFT_104228 [Selaginella moellendorffii]
gi|300156284|gb|EFJ22913.1| hypothetical protein SELMODRAFT_104228 [Selaginella moellendorffii]
Length = 495
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 170/490 (34%), Positives = 272/490 (55%), Gaps = 14/490 (2%)
Query: 39 VSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH--- 95
V N +LN+Y KCG + AR+ F+ M+ RN++SWS M++ + Q G+H AL F +M
Sbjct: 12 VGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEEG 71
Query: 96 LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDAL 155
+ PNE F S + ACA +++ +G+ IH + VG +L+ MY K +A
Sbjct: 72 VEPNEVTFLSVLDACANAEAVEQGEMIHRLVARKKLDVGLIVGTALVGMYGKCSRLIEAR 131
Query: 156 LVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN 215
V+ E ++V+++ +I+ + + + ++F M G+ P+ L CS +
Sbjct: 132 QVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILMSILGACSSAG 191
Query: 216 DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIA 275
L +G + H L V C ++ GNT++ +Y K + A+ F +E +DLISW+ +A
Sbjct: 192 ALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLISWSAMLA 251
Query: 276 ACS---HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
+ HC D F+ M + GV+PD TF S+L AC+ L ++ G IH +
Sbjct: 252 VIAEHGHCKD---AFVHFRRMDLE-GVKPDYVTFVSLLDACSLLGALVEGHVIHTRIRAE 307
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
+ + N+L++MY KCG + + ++F+ M HRNV++W T+I A H G AL+LF
Sbjct: 308 GFQSVMYIENSLIDMYGKCGSLQAAREIFDRMSHRNVITWTTMITACVQHEQGKEALELF 367
Query: 393 EQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGR 452
E+M+ G++PD V F+ ++ +C+H+GLV+EG YF M + +P +EHF ++DLLGR
Sbjct: 368 EEMEKAGVQPDQVAFLSIIHSCSHSGLVEEGRIYFLKMVEDQSFTPGVEHFVGMLDLLGR 427
Query: 453 AGKLLEAEEYTKKFPLGQDPIVLG--TLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYV 510
+GKL EAEE + P+ +P V+G TLLSAC+ D R+A + L P PYV
Sbjct: 428 SGKLNEAEELMEFMPV--EPGVVGWNTLLSACKTHNDTERAGRVAGGMLVLGPGHAGPYV 485
Query: 511 LLSNLYASDG 520
SN+ + G
Sbjct: 486 SFSNILSGKG 495
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 183/347 (52%), Gaps = 3/347 (0%)
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
FVGNSL++MY K G +A + N++S++ ++A + + ++ +F+ M +
Sbjct: 11 FVGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEE 70
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
G+ P+ +F L+ C+ + + +G ++H L + KL+ VG ++ +Y K + + EA
Sbjct: 71 GVEPNEVTFLSVLDACANAEAVEQGEMIHRLVARKKLDVGLIVGTALVGMYGKCSRLIEA 130
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
+ F I EKD+++W+T I+A + + + +F M+ D GVRP++ SIL AC+
Sbjct: 131 RQVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNLD-GVRPNEIILMSILGACSS 189
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
++ GK H ++ DV GN L+ MY KCG ++ + +F M R+++SW+ +
Sbjct: 190 AGALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLISWSAM 249
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYG 435
+A A H A F +M G+KPD VTF+ LL AC+ G + EG + + G
Sbjct: 250 LAVIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGHVIHTRI-RAEG 308
Query: 436 ISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
+ LID+ G+ G L A E + ++ I T+++AC
Sbjct: 309 FQSVMYIENSLIDMYGKCGSLQAAREIFDRMS-HRNVITWTTMITAC 354
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 204/384 (53%), Gaps = 12/384 (3%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L C+ +A++QG +H V + + +IV ++ +Y KC ++I AR+VFD + E+
Sbjct: 81 SVLDACANAEAVEQGEMIHRLVARKKLDVGLIVGTALVGMYGKCSRLIEARQVFDGIVEK 140
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIH 123
++V+WS MIS + Q G A++ F M+L PNE I S + AC+ +L +G+ H
Sbjct: 141 DVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILMSILGACSSAGALAEGKMTH 200
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ G+ + GN+LI MY K G + A V+G +L+S++A++A E+ +
Sbjct: 201 ELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLISWSAMLAVIAEHGHCK 260
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
F F+ M +G+ PD +F L+ CS+ L +G ++H +S ++ N+++
Sbjct: 261 DAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGHVIHTRIRAEGFQSVMYIENSLI 320
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y K + A + F + +++I+W T I AC ++ L +F+EM GV+PD
Sbjct: 321 DMYGKCGSLQAAREIFDRMSHRNVITWTTMITACVQHEQGKEALELFEEMEKA-GVQPDQ 379
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG----NALVNMYAKCGLISCSYK 359
F SI+ +C+ V+ G+ + ++M +Q G ++++ + G ++ + +
Sbjct: 380 VAFLSIIHSCSHSGLVEEGR---IYFLKMVEDQSFTPGVEHFVGMLDLLGRSGKLNEAEE 436
Query: 360 LFNEM-LHRNVVSWNTIIAAHANH 382
L M + VV WNT+++A H
Sbjct: 437 LMEFMPVEPGVVGWNTLLSACKTH 460
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 145/286 (50%), Gaps = 9/286 (3%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S+L CS AL +G H V+ G DV N ++ +Y KCG + A+ VF M R
Sbjct: 182 SILGACSSAGALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERR 241
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIH 123
+L+SWSAM++ + G A F +M L P+ F S + AC+ + +LV+G IH
Sbjct: 242 DLISWSAMLAVIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGHVIH 301
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
G+ S+ ++ NSLI MY K G A ++ N++++ +I V+++Q +
Sbjct: 302 TRIRAEGFQSVMYIENSLIDMYGKCGSLQAAREIFDRMSHRNVITWTTMITACVQHEQGK 361
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES---NPFVGN 240
+ E+F+ M + G+ PD+ +F + CS S + +G I V+ + + FVG
Sbjct: 362 EALELFEEMEKAGVQPDQVAFLSIIHSCSHSGLVEEGRIYFLKMVEDQSFTPGVEHFVG- 420
Query: 241 TIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEK 285
++ L + + EAE+ + E ++ WNT ++AC D E+
Sbjct: 421 -MLDLLGRSGKLNEAEELMEFMPVEPGVVGWNTLLSACKTHNDTER 465
>gi|147862014|emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
Length = 822
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 185/612 (30%), Positives = 320/612 (52%), Gaps = 40/612 (6%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
ISSLL C+ K+L +G LH ++ +G + I+ ++ Y+ ++ A + + +
Sbjct: 177 ISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSN 236
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQ 121
+ W+ +IS + + G AL + QM + P+ + + S + AC L G++
Sbjct: 237 ILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKE 296
Query: 122 IH--------AYSLKFGYASISFVG-----------------------NSLISMYMKVGY 150
+H +SL A IS G NS+IS+Y +G
Sbjct: 297 VHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGM 356
Query: 151 SSDALLVYG----EAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAG 206
++A ++G E E N++ +N + G++ + E+ M + G D +
Sbjct: 357 WNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVALII 416
Query: 207 GLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKD 266
GL CS D + G +H ++ V N+++ +YS+ + A F+L+E K
Sbjct: 417 GLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLFQLMEAKS 476
Query: 267 LISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIH 326
LISWN+ I+ C H E+ + +EM G+ P+ T AS+L CA +A++QHGK+ H
Sbjct: 477 LISWNSIISGCCHMDRSEEASFLLREMLLS-GIEPNYVTIASVLPLCARVANLQHGKEFH 535
Query: 327 AHLIRMRLNQD-VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
++ R +D + + NALV+MYA+ G + + ++F+ + R+ +++ ++IA + G
Sbjct: 536 CYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEG 595
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
+ALKLFE+M IKPD +T I +L+AC+H+GLV +G+ F M YG++P +EHF C
Sbjct: 596 QAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFAC 655
Query: 446 LIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTT 505
+ DL GRAG L +A+E + P P + TL+ ACR+ R+ IGE A++L ++P
Sbjct: 656 MTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPEN 715
Query: 506 TSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKI 565
YVL++N+YA+ G W +A R ++D G++K P + ++V F F V + S++
Sbjct: 716 PGYYVLIANMYAAAGCWNKLAKVRXFMRDLGVRKAPGCAWVDVGTGFSPFLVDDTSNANA 775
Query: 566 GEINYMLKTLSL 577
EI +L+ L++
Sbjct: 776 DEIYPLLEGLTM 787
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,594,656,151
Number of Sequences: 23463169
Number of extensions: 351318992
Number of successful extensions: 939768
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7968
Number of HSP's successfully gapped in prelim test: 3397
Number of HSP's that attempted gapping in prelim test: 739338
Number of HSP's gapped (non-prelim): 67904
length of query: 579
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 431
effective length of database: 8,886,646,355
effective search space: 3830144579005
effective search space used: 3830144579005
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)