BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047471
(579 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 395 bits (1015), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/643 (33%), Positives = 358/643 (55%), Gaps = 74/643 (11%)
Query: 6 SSLLHHCSKTKALQQGIS-LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+ LL C K+K + +HA+V+K G ++ + N +++ Y+KCG + R+VFD+M
Sbjct: 23 AKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMP 82
Query: 65 ERNL-------------------------------VSWSAMISGHHQAGEHLLALEFFSQ 93
+RN+ +W++M+SG Q AL +F+
Sbjct: 83 QRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAM 142
Query: 94 MH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGY 150
MH + NEY FAS +SAC+G+ + KG Q+H+ K + S ++G++L+ MY K G
Sbjct: 143 MHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGN 202
Query: 151 SSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEI 210
+DA V+ E + N+VS+N+LI F +N + +VF++ML + PD + A +
Sbjct: 203 VNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISA 262
Query: 211 CSVSNDLRKGMILHCLTVKC-KLESNPFVGNTIMALYSKFNLIGEAE------------- 256
C+ + ++ G +H VK KL ++ + N + +Y+K + I EA
Sbjct: 263 CASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIA 322
Query: 257 --------------KAFRLI----EEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
KA RL+ E++++SWN IA + + E+ LS+F + +
Sbjct: 323 ETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRE-S 381
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRL------NQDVGVGNALVNMYAKCG 352
V P ++FA+IL ACA LA + G Q H H+++ D+ VGN+L++MY KCG
Sbjct: 382 VCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCG 441
Query: 353 LISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
+ Y +F +M+ R+ VSWN +I A + G AL+LF +M +G KPD +T IG+L+
Sbjct: 442 CVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLS 501
Query: 413 ACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDP 472
AC HAG V+EG YF+SM + +G++P +H+TC++DLLGRAG L EA+ ++ P+ D
Sbjct: 502 ACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDS 561
Query: 473 IVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKML 532
++ G+LL+AC++ R++ +G+ +A++L ++P+ + PYVLLSN+YA G W DV RK +
Sbjct: 562 VIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSM 621
Query: 533 KDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ G+ K+P S I++QG F V + SH + +I+ +L L
Sbjct: 622 RKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDIL 664
Score = 188 bits (478), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 211/428 (49%), Gaps = 54/428 (12%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S +S+L CS + +G+ +H+ + K DV + + ++++Y+KCG + A++VFDEM
Sbjct: 154 SFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEM 213
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+RN+VSW+++I+ Q G + AL+ F M + P+E AS ISACA + ++ GQ
Sbjct: 214 GDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQ 273
Query: 121 QIHAYSLKFG---------------YASISFVG-----------------NSLISMYMKV 148
++H +K YA S + S+IS Y
Sbjct: 274 EVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMA 333
Query: 149 GYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGL 208
+ A L++ + E N+VS+NALIAG+ +N + E+ +F L+ R+ + P +SFA L
Sbjct: 334 ASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANIL 393
Query: 209 EICSVSNDLRKGMILHCLTVKCKL------ESNPFVGNTIMALYSKFNLIGEAEKAFRLI 262
+ C+ +L GM H +K E + FVGN+++ +Y K + E FR +
Sbjct: 394 KACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM 453
Query: 263 EEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG 322
E+D +SWN I + + L +F+EM + G +PD T +L+AC V+ G
Sbjct: 454 MERDCVSWNAMIIGFAQNGYGNEALELFREML-ESGEKPDHITMIGVLSACGHAGFVEEG 512
Query: 323 KQIHAHLIRMRLNQDVGVG------NALVNMYAKCGLISCSYKLFNEM-LHRNVVSWNTI 375
+ + + R D GV +V++ + G + + + EM + + V W ++
Sbjct: 513 RHYFSSMTR-----DFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSL 567
Query: 376 IAAHANHR 383
+AA HR
Sbjct: 568 LAACKVHR 575
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 376 bits (965), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/566 (36%), Positives = 327/566 (57%), Gaps = 6/566 (1%)
Query: 14 KTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSA 73
K +L G +H LK+G+ + VSN ++N+Y K K AR VFD MSER+L+SW++
Sbjct: 327 KVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNS 386
Query: 74 MISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGI-QSLVKGQQIHAYSLKF 129
+I+G Q G + A+ F Q+ L P++Y S + A + + + L +Q+H +++K
Sbjct: 387 VIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKI 446
Query: 130 GYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVF 189
S SFV +LI Y + +A +++ E +LV++NA++AG+ ++ K ++F
Sbjct: 447 NNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLF 505
Query: 190 KLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF 249
LM +QG D F+ A + C + +G +H +K + + +V + I+ +Y K
Sbjct: 506 ALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKC 565
Query: 250 NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
+ A+ AF I D ++W T I+ C + E+ VF +M GV PD+FT A++
Sbjct: 566 GDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQM-RLMGVLPDEFTIATL 624
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
A + L +++ G+QIHA+ +++ D VG +LV+MYAKCG I +Y LF + N+
Sbjct: 625 AKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNI 684
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNS 429
+WN ++ A H G L+LF+QMK+ GIKPD VTFIG+L+AC+H+GLV E + S
Sbjct: 685 TAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRS 744
Query: 430 MEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVV 489
M YGI P+IEH++CL D LGRAG + +AE + + + TLL+ACR++ D
Sbjct: 745 MHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTE 804
Query: 490 IGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQ 549
G+R+A +L L+P +S YVLLSN+YA+ W ++ AR M+K +KK+P +S IEV+
Sbjct: 805 TGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVK 864
Query: 550 GTFEKFTVAEFSHSKIGEINYMLKTL 575
F V + S+ + I +K +
Sbjct: 865 NKIHIFVVDDRSNRQTELIYRKVKDM 890
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 198/393 (50%), Gaps = 15/393 (3%)
Query: 75 ISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGY 131
+S + +G++ L+ F+ M + ++ F ++ + SL GQQ+H +LK G
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346
Query: 132 ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKL 191
+ V NSLI+MY K+ A V+ E +L+S+N++IAG +N + +F
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMIL----HCLTVKCKLESNPFVGNTIMALYS 247
+LR GL PD+++ L+ S L +G+ L H +K S+ FV ++ YS
Sbjct: 407 LLRCGLKPDQYTMTSVLKAAS---SLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYS 463
Query: 248 KFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFA 307
+ + EAE F DL++WN +A + D K L +F M + G R DDFT A
Sbjct: 464 RNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALM-HKQGERSDDFTLA 521
Query: 308 SILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHR 367
++ C L ++ GKQ+HA+ I+ + D+ V + +++MY KCG +S + F+ +
Sbjct: 522 TVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVP 581
Query: 368 NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG-EAY 426
+ V+W T+I+ + A +F QM+ G+ PD T L A + +++G + +
Sbjct: 582 DDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIH 641
Query: 427 FNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
N+++ P + T L+D+ + G + +A
Sbjct: 642 ANALKLNCTNDPFVG--TSLVDMYAKCGSIDDA 672
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/553 (22%), Positives = 238/553 (43%), Gaps = 82/553 (14%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
L + + L G HA +L P+ + N+++++Y+KCG + AR+VFD+M +R+
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRD 104
Query: 68 LVSWSAMISGHHQAGEHLLA--LEFFSQMHLLPNEYIFASAIS------ACAGIQSLVKG 119
LVSW+++++ + Q+ E ++ + F +L + ++ S ++ C +
Sbjct: 105 LVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWAS 164
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ H Y+ K G FV +L+++Y+K G + +++ E ++V +N ++ ++E
Sbjct: 165 ESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEM 224
Query: 180 QQPEKGFEVFKLMLRQGLLPDRF-------------------SFAGGLEICSVS------ 214
E+ ++ GL P+ SFA G + SVS
Sbjct: 225 GFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRN 284
Query: 215 --------------------------------------------NDLRKGMILHCLTVKC 230
+ L G +HC+ +K
Sbjct: 285 KGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKL 344
Query: 231 KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVF 290
L+ V N+++ +Y K G A F + E+DLISWN+ IA + + + +F
Sbjct: 345 GLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLF 404
Query: 291 KEMSNDHGVRPDDFTFASILAACAGLAS-VQHGKQIHAHLIRMRLNQDVGVGNALVNMYA 349
++ G++PD +T S+L A + L + KQ+H H I++ D V AL++ Y+
Sbjct: 405 MQLLR-CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYS 463
Query: 350 KCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIG 409
+ + + LF E + ++V+WN ++A + G LKLF M G + D T
Sbjct: 464 RNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLAT 522
Query: 410 LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLG 469
+ C + +G+ K+ G D+ + ++D+ + G + A+ P+
Sbjct: 523 VFKTCGFLFAINQGKQVHAYAIKS-GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVP 581
Query: 470 QDPIVLGTLLSAC 482
D + T++S C
Sbjct: 582 DD-VAWTTMISGC 593
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 153/298 (51%), Gaps = 19/298 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+++++ C A+ QG +HA +K G D+ VS+ +L++Y KCG M A+ FD +
Sbjct: 519 TLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI 578
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+ V+W+ MISG + GE A FSQM L LP+E+ A+ A + + +L +G+
Sbjct: 579 PVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGR 638
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QIHA +LK + FVG SL+ MY K G DA ++ N+ ++NA++ G ++
Sbjct: 639 QIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHG 698
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS----VSNDLRKGMILHC-LTVKCKLESN 235
+ ++ ++FK M G+ PD+ +F G L CS VS + +H +K ++E
Sbjct: 699 EGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHY 758
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIE----EKDLISWNTFIAACSHCADYEKGLSV 289
+ + + + L+ +AE LIE E + T +AAC D E G V
Sbjct: 759 SCLADAL----GRAGLVKQAEN---LIESMSMEASASMYRTLLAACRVQGDTETGKRV 809
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 10/209 (4%)
Query: 206 GGLEICSVSNDLRKGMILHCLTVKCKLESNP--FVGNTIMALYSKFNLIGEAEKAFRLIE 263
G L S+DL G H + E NP F+ N ++++YSK + A + F +
Sbjct: 44 GFLRNAITSSDLMLGKCTHARILT--FEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 264 EKDLISWNTFIAA---CSHCA--DYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLAS 318
++DL+SWN+ +AA S C + ++ +F+ + D V T + +L C
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQD-VVYTSRMTLSPMLKLCLHSGY 160
Query: 319 VQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAA 378
V + H + ++ L+ D V ALVN+Y K G + LF EM +R+VV WN ++ A
Sbjct: 161 VWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKA 220
Query: 379 HANHRLGGSALKLFEQMKATGIKPDSVTF 407
+ A+ L ++G+ P+ +T
Sbjct: 221 YLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/578 (35%), Positives = 328/578 (56%), Gaps = 8/578 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +SLL C+ + L+ G H+ ++K + ++ V N ++++YAKCG + AR++F+ M
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQ 120
+R+ V+W+ +I + Q A + F +M+L + + AS + AC + L +G+
Sbjct: 490 CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGK 549
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H S+K G G+SLI MY K G DA V+ E ++VS NALIAG+ +N
Sbjct: 550 QVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN 609
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN-PFVG 239
E+ +F+ ML +G+ P +FA +E C L G H K S ++G
Sbjct: 610 L-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLG 668
Query: 240 NTIMALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
+++ +Y + EA F L K ++ W ++ S YE+ L +KEM +D G
Sbjct: 669 ISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHD-G 727
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
V PD TF ++L C+ L+S++ G+ IH+ + + + D N L++MYAKCG + S
Sbjct: 728 VLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSS 787
Query: 359 KLFNEMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++F+EM R NVVSWN++I +A + ALK+F+ M+ + I PD +TF+G+LTAC+HA
Sbjct: 788 QVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHA 847
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
G V +G F M YGI ++H C++DLLGR G L EA+++ + L D + +
Sbjct: 848 GKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSS 907
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL ACR+ D + GE A++L L+P +S YVLLSN+YAS G W RK+++D G+
Sbjct: 908 LLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGV 967
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KK P YS I+V+ F + SHS+IG+I L+ L
Sbjct: 968 KKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDL 1005
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 140/423 (33%), Positives = 228/423 (53%), Gaps = 8/423 (1%)
Query: 32 GIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFF 91
G +PD + V+N Y + GK+ AR +F EMS ++V+W+ MISGH + G +A+E+F
Sbjct: 256 GHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYF 315
Query: 92 SQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKV 148
M + S +SA + +L G +HA ++K G AS +VG+SL+SMY K
Sbjct: 316 FNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKC 375
Query: 149 GYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGL 208
A V+ E N V +NA+I G+ N + K E+F M G D F+F L
Sbjct: 376 EKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLL 435
Query: 209 EICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLI 268
C+ S+DL G H + +K KL N FVGN ++ +Y+K + +A + F + ++D +
Sbjct: 436 STCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNV 495
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
+WNT I + + + +FK M N G+ D AS L AC + + GKQ+H
Sbjct: 496 TWNTIIGSYVQDENESEAFDLFKRM-NLCGIVSDGACLASTLKACTHVHGLYQGKQVHCL 554
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSA 388
++ L++D+ G++L++MY+KCG+I + K+F+ + +VVS N +IA ++ + L A
Sbjct: 555 SVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEA 613
Query: 389 LKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLID 448
+ LF++M G+ P +TF ++ AC+ + G + + K G S + E+ I
Sbjct: 614 VVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKR-GFSSEGEYLG--IS 670
Query: 449 LLG 451
LLG
Sbjct: 671 LLG 673
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 136/460 (29%), Positives = 249/460 (54%), Gaps = 12/460 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+L L G+ +HA +K+G+ ++ V + ++++Y+KC KM A KVF+ +
Sbjct: 329 TLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEAL 388
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
E+N V W+AMI G+ GE +E F M +++ F S +S CA L G
Sbjct: 389 EEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGS 448
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q H+ +K A FVGN+L+ MY K G DA ++ + + V++N +I +V+++
Sbjct: 449 QFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDE 508
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ F++FK M G++ D A L+ C+ + L +G +HCL+VKC L+ + G+
Sbjct: 509 NESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGS 568
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++ +YSK +I +A K F + E ++S N IA S + E+ + +F+EM GV
Sbjct: 569 SLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLT-RGVN 626
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG-VGNALVNMYAKCGLISCSYK 359
P + TFA+I+ AC S+ G Q H + + + + +G +L+ MY ++ +
Sbjct: 627 PSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACA 686
Query: 360 LFNEMLH-RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
LF+E+ +++V W +++ H+ + ALK +++M+ G+ PD TF+ +L C+
Sbjct: 687 LFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLS 746
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFT--CLIDLLGRAGKL 456
++EG A + + + ++ D++ T LID+ + G +
Sbjct: 747 SLREGRAIHSLI---FHLAHDLDELTSNTLIDMYAKCGDM 783
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 232/467 (49%), Gaps = 40/467 (8%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S +L C++ ++ G +H +++KMG++ + ++++YAKC ++ AR+VF+ +
Sbjct: 162 TFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI 221
Query: 64 SERNLVSWSAMISGHHQAG---EHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
+ N V W+ + SG+ +AG E +L E P+ F
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFV---------------- 265
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
++I+ Y+++G DA L++GE P++V++N +I+G +
Sbjct: 266 -------------------TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG 306
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
E F M + + R + L + +L G+++H +K L SN +VG+
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS 366
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++++YSK + A K F +EEK+ + WN I +H + K + +F +M + G
Sbjct: 367 SLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSS-GYN 425
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
DDFTF S+L+ CA ++ G Q H+ +I+ +L +++ VGNALV+MYAKCG + + ++
Sbjct: 426 IDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQI 485
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F M R+ V+WNTII ++ A LF++M GI D L AC H +
Sbjct: 486 FERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGL 545
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+G+ + + G+ D+ + LID+ + G + +A + P
Sbjct: 546 YQGKQ-VHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 226/468 (48%), Gaps = 42/468 (8%)
Query: 17 ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMIS 76
AL+ G ++H+ L +GI + + N +++LYAKC ++ A K FD + E+++ +W++M+S
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 77 GHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYAS 133
+ G+ L F + + PN++ F+ +S CA ++ G+QIH +K G
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 134 ISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLML 193
S+ G +L+ MY K SDA V+ +PN V + L +G+V+ PE+ VF+ M
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 194 RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
+G PD +F T++ Y + +
Sbjct: 254 DEGHRPDHLAFV-----------------------------------TVINTYIRLGKLK 278
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
+A F + D+++WN I+ + F M V+ T S+L+A
Sbjct: 279 DARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKS-SVKSTRSTLGSVLSAI 337
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
+A++ G +HA I++ L ++ VG++LV+MY+KC + + K+F + +N V WN
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWN 397
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKT 433
+I +A++ ++LF MK++G D TF LL+ C + ++ G + F+S+
Sbjct: 398 AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG-SQFHSIIIK 456
Query: 434 YGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
++ ++ L+D+ + G L +A + ++ +D + T++ +
Sbjct: 457 KKLAKNLFVGNALVDMYAKCGALEDARQIFERM-CDRDNVTWNTIIGS 503
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 146/340 (42%), Gaps = 40/340 (11%)
Query: 74 MISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYAS 133
++ H Q + LL + Q L + +F A +L G+ +H+ SL G S
Sbjct: 37 VLPSHDQIHQRLLEI-CLGQCKLFKSRKVFDEMPQRLA--LALRIGKAVHSKSLILGIDS 93
Query: 134 ISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLML 193
+GN+++ +Y K S A + + E ++ ++N++++ + +P K F +
Sbjct: 94 EGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLF 152
Query: 194 RQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIG 253
+ P++F+F+ L C+ ++ G +HC +K LE N + G ++ +Y+K + I
Sbjct: 153 ENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRIS 212
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
+A + F I + + + W + E+ + VF+ M D G RPD F ++
Sbjct: 213 DARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM-RDEGHRPDHLAFVTV---- 267
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWN 373
+N Y + G + + LF EM +VV+WN
Sbjct: 268 -------------------------------INTYIRLGKLKDARLLFGEMSSPDVVAWN 296
Query: 374 TIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTA 413
+I+ H A++ F M+ + +K T +L+A
Sbjct: 297 VMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/578 (34%), Positives = 331/578 (57%), Gaps = 8/578 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+++ S+L C++ QG +H +LK G ++I SN+++++Y KC + ++A KVFD
Sbjct: 7 QNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDS 66
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
M ERN+VSWSA++SGH G+ +L FS+M + PNE+ F++ + AC + +L KG
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
QIH + LK G+ + VGNSL+ MY K G ++A V+ + +L+S+NA+IAGFV
Sbjct: 127 LQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHA 186
Query: 180 QQPEKGFEVFKLMLRQGL--LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLE--SN 235
K + F +M + PD F+ L+ CS + + G +H V+ S+
Sbjct: 187 GYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS 246
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
+ +++ LY K + A KAF I+EK +ISW++ I + ++ + + +FK +
Sbjct: 247 ATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL-Q 305
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
+ + D F +SI+ A A ++ GKQ+ A +++ + V N++V+MY KCGL+
Sbjct: 306 ELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVD 365
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ K F EM ++V+SW +I + H LG ++++F +M I+PD V ++ +L+AC+
Sbjct: 366 EAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACS 425
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
H+G++KEGE F+ + +T+GI P +EH+ C++DLLGRAG+L EA+ P+ + +
Sbjct: 426 HSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIW 485
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
TLLS CR+ D+ +G+ + K L + + YV++SNLY G W + AR++
Sbjct: 486 QTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIK 545
Query: 536 GLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLK 573
GLKKE S +E++ F E SH I LK
Sbjct: 546 GLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLK 583
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/575 (33%), Positives = 326/575 (56%), Gaps = 4/575 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ + LL C L+ G +H ++K G D+ + N+YAKC ++ ARKVFD M
Sbjct: 137 NFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRM 196
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
ER+LVSW+ +++G+ Q G +ALE M +L P+ S + A + ++ + G+
Sbjct: 197 PERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGK 256
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+IH Y+++ G+ S+ + +L+ MY K G A ++ E N+VS+N++I +V+N+
Sbjct: 257 EIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNE 316
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
P++ +F+ ML +G+ P S G L C+ DL +G +H L+V+ L+ N V N
Sbjct: 317 NPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVN 376
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
+++++Y K + A F ++ + L+SWN I + L+ F +M + V+
Sbjct: 377 SLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS-RTVK 435
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
PD FT+ S++ A A L+ H K IH ++R L+++V V ALV+MYAKCG I + +
Sbjct: 436 PDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLI 495
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F+ M R+V +WN +I + H G +AL+LFE+M+ IKP+ VTF+ +++AC+H+GLV
Sbjct: 496 FDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLV 555
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
+ G F M++ Y I ++H+ ++DLLGRAG+L EA ++ + P+ V G +L
Sbjct: 556 EAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLG 615
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC++ ++V E+ A++LF L P +VLL+N+Y + MW V R + GL+K
Sbjct: 616 ACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKT 675
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
P SM+E++ F +H +I L+ L
Sbjct: 676 PGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKL 710
Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 224/456 (49%), Gaps = 8/456 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL CS K L+Q + L V K G+ + +++L+ + G + A +VF+ + +
Sbjct: 43 LLERCSSLKELRQILPL---VFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
V + M+ G + + AL+FF +M + P Y F + C L G++IH
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+K G++ F L +MY K ++A V+ E +LVS+N ++AG+ +N
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
E+ K M + L P + L S + G +H ++ +S + ++
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD 279
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
+Y+K + A + F + E++++SWN+ I A + ++ + +F++M D GV+P D
Sbjct: 280 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML-DEGVKPTDV 338
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
+ L ACA L ++ G+ IH + + L+++V V N+L++MY KC + + +F ++
Sbjct: 339 SVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL 398
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
R +VSWN +I A + AL F QM++ +KPD+ T++ ++TA + +
Sbjct: 399 QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 458
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAE 460
+ + + + ++ T L+D+ + G ++ A
Sbjct: 459 -WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIAR 493
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 182/364 (50%), Gaps = 10/364 (2%)
Query: 90 FFSQMHLLPN---EYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYM 146
F S+ + +P E+ A + C+ ++ L +QI K G F L+S++
Sbjct: 24 FLSERNYIPANVYEHPAALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFC 80
Query: 147 KVGYSSDALLVYGEAFEPNL-VSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA 205
+ G +A V+ E + L V ++ ++ GF + +K + F M + P ++F
Sbjct: 81 RYGSVDEAARVF-EPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFT 139
Query: 206 GGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK 265
L++C +LR G +H L VK + F + +Y+K + EA K F + E+
Sbjct: 140 YLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER 199
Query: 266 DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
DL+SWNT +A S L + K M ++ ++P T S+L A + L + GK+I
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEMVKSMCEEN-LKPSFITIVSVLPAVSALRLISVGKEI 258
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
H + +R + V + ALV+MYAKCG + + +LF+ ML RNVVSWN++I A+ +
Sbjct: 259 HGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENP 318
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
A+ +F++M G+KP V+ +G L AC G ++ G + + + G+ ++
Sbjct: 319 KEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR-FIHKLSVELGLDRNVSVVNS 377
Query: 446 LIDL 449
LI +
Sbjct: 378 LISM 381
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 127/254 (50%), Gaps = 5/254 (1%)
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDL 267
LE CS +LR+ + L K L F +++L+ ++ + EA + F I+ K
Sbjct: 44 LERCSSLKELRQ---ILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLN 100
Query: 268 ISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHA 327
+ ++T + + +D +K L F M D V P + F +L C A ++ GK+IH
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYD-DVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 328 HLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGS 387
L++ + D+ L NMYAKC ++ + K+F+ M R++VSWNTI+A ++ + +
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 388 ALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLI 447
AL++ + M +KP +T + +L A + L+ G+ ++ G + T L+
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS-GFDSLVNISTALV 278
Query: 448 DLLGRAGKLLEAEE 461
D+ + G L A +
Sbjct: 279 DMYAKCGSLETARQ 292
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 363 bits (933), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 199/565 (35%), Positives = 324/565 (57%), Gaps = 16/565 (2%)
Query: 20 QGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHH 79
+G+ +H V+K G+ + VSN ++NLY KCG + AR +FD+ +++V+W++MISG+
Sbjct: 212 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 80 QAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF 136
G L AL F M L +E FAS I CA ++ L +Q+H +K+G+
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 137 VGNSLISMYMKVGYSSDALLVYGE-AFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
+ +L+ Y K DAL ++ E N+VS+ A+I+GF++N E+ ++F M R+
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 196 GLLPDRFSFA---GGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLI 252
G+ P+ F+++ L + S S +H VK E + VG ++ Y K +
Sbjct: 392 GVRPNEFTYSVILTALPVISPSE-------VHAQVVKTNYERSSTVGTALLDAYVKLGKV 444
Query: 253 GEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAA 312
EA K F I++KD+++W+ +A + + E + +F E++ G++P++FTF+SIL
Sbjct: 445 EEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKG-GIKPNEFTFSSILNV 503
Query: 313 CAGL-ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
CA AS+ GKQ H I+ RL+ + V +AL+ MYAK G I + ++F +++VS
Sbjct: 504 CAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVS 563
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
WN++I+ +A H AL +F++MK +K D VTFIG+ AC HAGLV+EGE YF+ M
Sbjct: 564 WNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMV 623
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
+ I+P EH +C++DL RAG+L +A + + P + T+L+ACR+ + +G
Sbjct: 624 RDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELG 683
Query: 492 ERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGT 551
A+++ ++P ++ YVLLSN+YA G W + A RK++ + +KKEP YS IEV+
Sbjct: 684 RLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNK 743
Query: 552 FEKFTVAEFSHSKIGEINYMLKTLS 576
F + SH +I L+ LS
Sbjct: 744 TYSFLAGDRSHPLKDQIYMKLEDLS 768
Score = 186 bits (471), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 225/454 (49%), Gaps = 19/454 (4%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G LH +K G DV V +++ Y K RKVFDEM ERN+V+W+ +ISG+ +
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 81 AGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
+ L F +M PN + FA+A+ A +G Q+H +K G V
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
NSLI++Y+K G A +++ + ++V++N++I+G+ N + +F M +
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
SFA +++C+ +LR LHC VK + + +M YSK + +A +
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351
Query: 258 AFRLIE-EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGL 316
F+ I +++SW I+ E+ + +F EM GVRP++FT++ IL A +
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKR-KGVRPNEFTYSVILTALPVI 410
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
+ ++HA +++ + VG AL++ Y K G + + K+F+ + +++V+W+ ++
Sbjct: 411 SP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAML 466
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL-VKEGEAYFNSMEKTYG 435
A +A +A+K+F ++ GIKP+ TF +L C + +G+ + +
Sbjct: 467 AGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHG-----FA 521
Query: 436 ISPDIEHFTC----LIDLLGRAGKLLEAEEYTKK 465
I ++ C L+ + + G + AEE K+
Sbjct: 522 IKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKR 555
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 217/413 (52%), Gaps = 15/413 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S +S++ C+ K L+ LH +V+K G D + ++ Y+KC M+ A ++F E+
Sbjct: 297 SFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEI 356
Query: 64 S-ERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
N+VSW+AMISG Q A++ FS+M + PNE+ ++ ++A ++
Sbjct: 357 GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP----VISP 412
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
++HA +K Y S VG +L+ Y+K+G +A V+ + ++V+++A++AG+ +
Sbjct: 413 SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQT 472
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSN-DLRKGMILHCLTVKCKLESNPFV 238
+ E ++F + + G+ P+ F+F+ L +C+ +N + +G H +K +L+S+ V
Sbjct: 473 GETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCV 532
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
+ ++ +Y+K I AE+ F+ EKDL+SWN+ I+ + K L VFKEM
Sbjct: 533 SSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKK-RK 591
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIR-MRLNQDVGVGNALVNMYAKCGLISCS 357
V+ D TF + AAC V+ G++ ++R ++ + +V++Y++ G + +
Sbjct: 592 VKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKA 651
Query: 358 YKLFNEMLH-RNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP-DSVTFI 408
K+ M + W TI+AA H+ + L K +KP DS ++
Sbjct: 652 MKVIENMPNPAGSTIWRTILAACRVHK--KTELGRLAAEKIIAMKPEDSAAYV 702
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 202/408 (49%), Gaps = 10/408 (2%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEY---IFASAISACAG 112
A +FD+ R+ S+ +++ G + G A F +H L E IF+S + A
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
+ + G+Q+H +KFG+ VG SL+ YMK D V+ E E N+V++ L
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 173 IAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
I+G+ N ++ +F M +G P+ F+FA L + + +G+ +H + VK L
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
+ V N+++ LY K + +A F E K +++WN+ I+ + + L +F
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCG 352
M ++ VR + +FAS++ CA L ++ +Q+H +++ D + AL+ Y+KC
Sbjct: 286 MRLNY-VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCT 344
Query: 353 LISCSYKLFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
+ + +LF E+ NVVSW +I+ + A+ LF +MK G++P+ T+ +L
Sbjct: 345 AMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL 404
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
TA ++ E + ++ Y S + T L+D + GK+ EA
Sbjct: 405 TAL---PVISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLGKVEEA 447
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 362 bits (930), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 200/581 (34%), Positives = 316/581 (54%), Gaps = 4/581 (0%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ +++SL+ CS L +G LHA K+G + + +LNLYAKC + A F
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVK 118
E N+V W+ M+ + + + F QM + +PN+Y + S + C + L
Sbjct: 449 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL 508
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+QIH+ +K + ++V + LI MY K+G A + ++VS+ +IAG+ +
Sbjct: 509 GEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ 568
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+K F+ ML +G+ D + C+ L++G +H S+
Sbjct: 569 YNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPF 628
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N ++ LYS+ I E+ AF E D I+WN ++ + E+ L VF M N G
Sbjct: 629 QNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRM-NREG 687
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ ++FTF S + A + A+++ GKQ+HA + + + + V NAL++MYAKCG IS +
Sbjct: 688 IDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAE 747
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
K F E+ +N VSWN II A++ H G AL F+QM + ++P+ VT +G+L+AC+H G
Sbjct: 748 KQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIG 807
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV +G AYF SM YG+SP EH+ C++D+L RAG L A+E+ ++ P+ D +V TL
Sbjct: 808 LVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTL 867
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
LSAC + +++ IGE A L L+P ++ YVLLSNLYA W R+ +K+ G+K
Sbjct: 868 LSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVK 927
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSLAA 579
KEP S IEV+ + F V + +H EI+ + L+ A
Sbjct: 928 KEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRA 968
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/439 (31%), Positives = 228/439 (51%), Gaps = 5/439 (1%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+HA +L G++ +V N +++LY++ G + LAR+VFD + ++ SW AMISG +
Sbjct: 209 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 268
Query: 84 HLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
A+ F M++L P Y F+S +SAC I+SL G+Q+H LK G++S ++V N+
Sbjct: 269 EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 328
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
L+S+Y +G A ++ + + V++N LI G + EK E+FK M GL PD
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
+ A + CS L +G LH T K SN + ++ LY+K I A F
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
E ++++ WN + A D +F++M + V P+ +T+ SIL C L ++
Sbjct: 449 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV-PNQYTYPSILKTCIRLGDLE 507
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G+QIH+ +I+ + V + L++MYAK G + ++ + ++VVSW T+IA +
Sbjct: 508 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
+ AL F QM GI+ D V ++AC +KEG+ ++ G S D+
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDL 626
Query: 441 EHFTCLIDLLGRAGKLLEA 459
L+ L R GK+ E+
Sbjct: 627 PFQNALVTLYSRCGKIEES 645
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 144/488 (29%), Positives = 246/488 (50%), Gaps = 16/488 (3%)
Query: 3 KSISSLLHHCSKTK-ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+++ LL C KT +L +G LH+ +LK+G+ + +S + + Y G + A KVFD
Sbjct: 85 QTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFD 144
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEF--FSQM---HLLPNEYIFASAISAC-AGIQS 115
EM ER + +W+ MI A +L+ F F +M ++ PNE F+ + AC G +
Sbjct: 145 EMPERTIFTWNKMIK--ELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVA 202
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
+QIHA L G + V N LI +Y + G+ A V+ + S+ A+I+G
Sbjct: 203 FDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISG 262
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+N+ + +F M G++P ++F+ L C L G LH L +K S+
Sbjct: 263 LSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD 322
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
+V N +++LY + AE F + ++D +++NT I S C EK + +FK M
Sbjct: 323 TYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHL 382
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
D G+ PD T AS++ AC+ ++ G+Q+HA+ ++ + + AL+N+YAKC I
Sbjct: 383 D-GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIE 441
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ F E NVV WN ++ A+ ++ ++F QM+ I P+ T+ +L C
Sbjct: 442 TALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCI 501
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTC--LIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
G ++ GE + + KT + + + C LID+ + GKL A + +F G+D +
Sbjct: 502 RLGDLELGEQIHSQIIKT---NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA-GKDVV 557
Query: 474 VLGTLLSA 481
T+++
Sbjct: 558 SWTTMIAG 565
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 361 bits (927), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 203/606 (33%), Positives = 327/606 (53%), Gaps = 35/606 (5%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
L C+K++A GI +H ++KMG D+ V N +++ YA+CG++ ARKVFDEMSERN+
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
VSW++MI G+ + A++ F +M + PN ISACA ++ L G++++A
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ G + ++L+ MYMK A ++ E NL NA+ + +V +
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILH--------------C----- 225
VF LM+ G+ PDR S + CS ++ G H C
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 380
Query: 226 LTVKCKLESNPF------------VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTF 273
+ +KC + F N+I+A Y + + A + F + EK+++SWNT
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 274 IAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR 333
I+ + +E+ + VF M + GV D T SI +AC L ++ K I+ ++ +
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 334 LNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFE 393
+ DV +G LV+M+++CG + +FN + +R+V +W I A A A++LF+
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560
Query: 394 QMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 453
M G+KPD V F+G LTAC+H GLV++G+ F SM K +G+SP+ H+ C++DLLGRA
Sbjct: 561 DMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRA 620
Query: 454 GKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLS 513
G L EA + + P+ + ++ +LL+ACR++ +V + A+++ L P T YVLLS
Sbjct: 621 GLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLS 680
Query: 514 NLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLK 573
N+YAS G W D+A R +K+ GL+K P S I+++G +FT + SH ++ I ML
Sbjct: 681 NVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLD 740
Query: 574 TLSLAA 579
+S A
Sbjct: 741 EVSQRA 746
Score = 165 bits (417), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 129/494 (26%), Positives = 223/494 (45%), Gaps = 47/494 (9%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCG---KMILARK 58
K+ S L +C L+ H ++ K G+ DV ++ + G + A++
Sbjct: 32 TKATPSSLKNCKTIDELKM---FHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKE 88
Query: 59 VFDEMSER--NLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGI 113
VF E SE ++++I G+ +G A+ F +M + P++Y F +SACA
Sbjct: 89 VF-ENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKS 147
Query: 114 QSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALI 173
++ G QIH +K GYA FV NSL+ Y + G A V+ E E N+VS+ ++I
Sbjct: 148 RAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMI 207
Query: 174 AGFVENQQPEKGFEVFKLMLR-QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
G+ + ++F M+R + + P+ + + C+ DL G ++ +
Sbjct: 208 CGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI 267
Query: 233 ESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKE 292
E N + + ++ +Y K N I A++ F +L N + + L VF
Sbjct: 268 EVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNL 327
Query: 293 MSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC- 351
M D GVRPD + S +++C+ L ++ GK H +++R + NAL++MY KC
Sbjct: 328 MM-DSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCH 386
Query: 352 ------------------------------GLISCSYKLFNEMLHRNVVSWNTIIAAHAN 381
G + +++ F M +N+VSWNTII+
Sbjct: 387 RQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQ 446
Query: 382 HRLGGSALKLFEQMKAT-GIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
L A+++F M++ G+ D VT + + +AC H G + + + +EK GI D+
Sbjct: 447 GSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLDV 505
Query: 441 EHFTCLIDLLGRAG 454
T L+D+ R G
Sbjct: 506 RLGTTLVDMFSRCG 519
Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 87/177 (49%), Gaps = 5/177 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S+ C AL ++ + K GIQ DV + +++++++CG A +F+ +
Sbjct: 472 TMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+ R++ +W+A I AG A+E F M L P+ F A++AC+ + +G+
Sbjct: 532 TNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGK 591
Query: 121 QIHAYSLKF-GYASISFVGNSLISMYMKVGYSSDAL-LVYGEAFEPNLVSFNALIAG 175
+I LK G + ++ + + G +A+ L+ EPN V +N+L+A
Sbjct: 592 EIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAA 648
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 359 bits (921), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 196/573 (34%), Positives = 324/573 (56%), Gaps = 7/573 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +L C L +G +H V++ G + D+ V N ++ +Y KCG + AR +FD M
Sbjct: 198 TFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRM 257
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
R+++SW+AMISG+ + G LE F M L P+ S ISAC + G+
Sbjct: 258 PRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGR 317
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IHAY + G+A V NSL MY+ G +A ++ ++VS+ +I+G+ N
Sbjct: 318 DIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNF 377
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
P+K + +++M + + PD + A L C+ DL G+ LH L +K +L S V N
Sbjct: 378 LPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVAN 437
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +YSK I +A F I K++ISW + IA + L ++M ++
Sbjct: 438 NLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK--MTLQ 495
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P+ T + LAACA + ++ GK+IHAH++R + D + NAL++MY +CG ++ ++
Sbjct: 496 PNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQ 555
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
FN ++V SWN ++ ++ G ++LF++M + ++PD +TFI LL C+ + +V
Sbjct: 556 FNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMV 614
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
++G YF+ ME YG++P+++H+ C++DLLGRAG+L EA ++ +K P+ DP V G LL+
Sbjct: 615 RQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLN 673
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
ACR+ + +GE A+ +F L + Y+LL NLYA G W +VA R+M+K++GL +
Sbjct: 674 ACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVD 733
Query: 541 PSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLK 573
S +EV+G F + H + EIN +L+
Sbjct: 734 AGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLE 766
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/454 (29%), Positives = 234/454 (51%), Gaps = 7/454 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
+L+ C +A ++G +++ L V + N L ++ + G ++ A VF +MSER
Sbjct: 99 ALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSER 158
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISACAGIQSLVKGQQI 122
NL SW+ ++ G+ + G A+ + +M + P+ Y F + C GI L +G+++
Sbjct: 159 NLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEV 218
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H + +++GY V N+LI+MY+K G A L++ +++S+NA+I+G+ EN
Sbjct: 219 HVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMC 278
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
+G E+F M + PD + + C + D R G +H + + V N++
Sbjct: 279 HEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSL 338
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+Y EAEK F +E KD++SW T I+ + +K + ++ M D V+PD
Sbjct: 339 TQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQD-SVKPD 397
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+ T A++L+ACA L + G ++H I+ RL V V N L+NMY+KC I + +F+
Sbjct: 398 EITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFH 457
Query: 363 EMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKE 422
+ +NV+SW +IIA + AL QMK T ++P+++T L AC G +
Sbjct: 458 NIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMC 516
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
G+ + +T G+ D L+D+ R G++
Sbjct: 517 GKEIHAHVLRT-GVGLDDFLPNALLDMYVRCGRM 549
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 146/307 (47%), Gaps = 2/307 (0%)
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
G N + E+ ++ M + D F + +C +G ++ + +
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
+GN +A++ +F + +A F + E++L SWN + + +++ + ++ M
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
GV+PD +TF +L C G+ + GK++H H++R D+ V NAL+ MY KCG +
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ LF+ M R+++SWN +I+ + + + L+LF M+ + PD +T +++AC
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
G + G ++ T G + DI L + AG EAE+ + +D +
Sbjct: 308 ELLGDRRLGRD-IHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMER-KDIVS 365
Query: 475 LGTLLSA 481
T++S
Sbjct: 366 WTTMISG 372
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 358 bits (919), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 198/577 (34%), Positives = 328/577 (56%), Gaps = 8/577 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+S++L CS L+ G +HA +L+ G++ D + N +++ Y KCG++I A K+F+ M
Sbjct: 252 LSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP 311
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQ 121
+N++SW+ ++SG+ Q H A+E F+ M L P+ Y +S +++CA + +L G Q
Sbjct: 312 NKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQ 371
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE--- 178
+HAY++K + S+V NSLI MY K +DA V+ ++V FNA+I G+
Sbjct: 372 VHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGT 431
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ + +F+ M + + P +F L + L +H L K L + F
Sbjct: 432 QWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFA 491
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
G+ ++ +YS + ++ F ++ KDL+ WN+ A ++ E+ L++F E+
Sbjct: 492 GSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRE 551
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
RPD+FTFA+++ A LASVQ G++ H L++ L + + NAL++MYAKCG ++
Sbjct: 552 -RPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAH 610
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
K F+ R+VV WN++I+++ANH G AL++ E+M + GI+P+ +TF+G+L+AC+HAG
Sbjct: 611 KAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAG 670
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV++G F M + +GI P+ EH+ C++ LLGRAG+L +A E +K P IV +L
Sbjct: 671 LVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSL 729
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
LS C +V + E A+ P + + +LSN+YAS GMW + R+ +K G+
Sbjct: 730 LSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVV 789
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KEP S I + F + SH K +I +L L
Sbjct: 790 KEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDL 826
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 142/442 (32%), Positives = 239/442 (54%), Gaps = 25/442 (5%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG--HHQA 81
+H ++ G++ D +SN ++NLY++ G M+ ARKVF++M ERNLVSWS M+S HH
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 82 GEHLLA--LEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ----QIHAYSLKFGYASIS 135
E L LEF+ PNEYI +S I AC+G+ +G+ Q+ ++ +K G+
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--RGRWMVFQLQSFLVKSGFDRDV 183
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
+VG LI Y+K G A LV+ E + V++ +I+G V+ + ++F ++
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMED 243
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
++PD + + L CS+ L G +H ++ LE + + N ++ Y K + A
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAA 303
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
K F + K++ISW T ++ A +++ + +F MS G++PD + +SIL +CA
Sbjct: 304 HKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSK-FGLKPDMYACSSILTSCAS 362
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
L ++ G Q+HA+ I+ L D V N+L++MYAKC ++ + K+F+ +VV +N +
Sbjct: 363 LHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAM 422
Query: 376 IAAHANHRLGGS-----ALKLFEQMKATGIKPDSVTFIGLLTAC---NHAGLVKEGEAYF 427
I ++ RLG AL +F M+ I+P +TF+ LL A GL K+
Sbjct: 423 IEGYS--RLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQ----I 476
Query: 428 NSMEKTYGISPDIEHFTCLIDL 449
+ + YG++ DI + LID+
Sbjct: 477 HGLMFKYGLNLDIFAGSALIDV 498
Score = 215 bits (548), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 245/458 (53%), Gaps = 10/458 (2%)
Query: 5 ISSLLHHCS--KTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+SS + CS + L + ++K G DV V +++ Y K G + AR VFD
Sbjct: 149 LSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDA 208
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
+ E++ V+W+ MISG + G ++L+ F Q+ +++P+ YI ++ +SAC+ + L G
Sbjct: 209 LPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGG 268
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+QIHA+ L++G + + N LI Y+K G A ++ N++S+ L++G+ +N
Sbjct: 269 KQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQN 328
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
++ E+F M + GL PD ++ + L C+ + L G +H T+K L ++ +V
Sbjct: 329 ALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVT 388
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCA---DYEKGLSVFKEMSND 296
N+++ +Y+K + + +A K F + D++ +N I S + + L++F++M
Sbjct: 389 NSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRF- 447
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISC 356
+RP TF S+L A A L S+ KQIH + + LN D+ G+AL+++Y+ C +
Sbjct: 448 RLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKD 507
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
S +F+EM +++V WN++ A + AL LF +++ + +PD TF ++TA +
Sbjct: 508 SRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGN 567
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
V+ G+ + + K G+ + L+D+ + G
Sbjct: 568 LASVQLGQEFHCQLLKR-GLECNPYITNALLDMYAKCG 604
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 161/321 (50%), Gaps = 16/321 (4%)
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
R FA L++ + + L ++H + LE + ++ N ++ LYS+ + A K F
Sbjct: 44 RREFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFE 103
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ E++L+SW+T ++AC+H YE+ L VF E P+++ +S + AC+GL
Sbjct: 104 KMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG-- 161
Query: 321 HGK----QIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
G+ Q+ + L++ ++DV VG L++ Y K G I + +F+ + ++ V+W T+I
Sbjct: 162 RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMI 221
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
+ +L+LF Q+ + PD +L+AC+ ++ G+ + + YG+
Sbjct: 222 SGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR-YGL 280
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAK 496
D LID + G+++ A + P ++ I TLLS +++ + E A
Sbjct: 281 EMDASLMNVLIDSYVKCGRVIAAHKLFNGMP-NKNIISWTTLLSG--YKQNALHKE--AM 335
Query: 497 QLFHLQPTTTSPYVLLSNLYA 517
+LF T+ S + L ++YA
Sbjct: 336 ELF----TSMSKFGLKPDMYA 352
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 355 bits (911), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 192/578 (33%), Positives = 317/578 (54%), Gaps = 10/578 (1%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
++KS SSL +++ G LH +LK G V N ++ Y K ++ ARKVF
Sbjct: 201 VSKSFSSL-------RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVF 253
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAIS---ACAGIQSLV 117
DEM+ER+++SW+++I+G+ G L F QM + E A+ +S CA + +
Sbjct: 254 DEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLIS 313
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+ +H+ +K ++ N+L+ MY K G A V+ E + ++VS+ ++IAG+
Sbjct: 314 LGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYA 373
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ ++F+ M +G+ PD ++ L C+ L +G +H + L + F
Sbjct: 374 REGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIF 433
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N +M +Y+K + EAE F + KD+ISWNT I S + LS+F + +
Sbjct: 434 VSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEK 493
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
PD+ T A +L ACA L++ G++IH +++R D V N+LV+MYAKCG + +
Sbjct: 494 RFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLA 553
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+ LF+++ +++VSW +IA + H G A+ LF QM+ GI+ D ++F+ LL AC+H+
Sbjct: 554 HMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHS 613
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV EG +FN M I P +EH+ C++D+L R G L++A + + P+ D + G
Sbjct: 614 GLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGA 673
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL CR+ DV + E++A+++F L+P T YVL++N+YA W V RK + GL
Sbjct: 674 LLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGL 733
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+K P S IE++G F + S+ + I L+ +
Sbjct: 734 RKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKV 771
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 232/461 (50%), Gaps = 6/461 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
+++ S+L C+ +K+L+ G + + G D + + + +Y CG + A +VFDE
Sbjct: 95 RTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDE 154
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
+ + W+ +++ ++G+ ++ F +M + + Y F+ + + ++S+ G
Sbjct: 155 VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGG 214
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+H + LK G+ + VGNSL++ Y+K A V+ E E +++S+N++I G+V N
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
EKG VF ML G+ D + C+ S + G +H + VK
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 334
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
NT++ +YSK + A+ FR + ++ ++S+ + IA + + + +F+EM + G+
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME-EEGI 393
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
PD +T ++L CA + GK++H + L D+ V NAL++MYAKCG + +
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 453
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFE-QMKATGIKPDSVTFIGLLTACNHAG 418
+F+EM ++++SWNTII ++ + AL LF ++ PD T +L AC
Sbjct: 454 VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS 513
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+G + + G D L+D+ + G LL A
Sbjct: 514 AFDKGREIHGYIMRN-GYFSDRHVANSLVDMYAKCGALLLA 553
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%)
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D T S+L CA S++ GK++ + D +G+ L MY CG + + ++F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTF 407
+E+ + WN ++ A ++ LF++M ++G++ DS TF
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 354 bits (909), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 206/570 (36%), Positives = 329/570 (57%), Gaps = 12/570 (2%)
Query: 17 ALQQGISLHAAVLKMGIQPDVI-VSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMI 75
L++G +H V+ G+ ++ + N ++N+YAKCG + AR+VF M++++ VSW++MI
Sbjct: 328 GLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMI 387
Query: 76 SGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYA 132
+G Q G + A+E + M +LP + S++S+CA ++ GQQIH SLK G
Sbjct: 388 TGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGID 447
Query: 133 SISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ--PEKGFEVFK 190
V N+L+++Y + GY ++ ++ E + VS+N++I +++ PE F
Sbjct: 448 LNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPE-AVVCFL 506
Query: 191 LMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN 250
R G +R +F+ L S + G +H L +K + N ++A Y K
Sbjct: 507 NAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCG 566
Query: 251 LIGEAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
+ EK F R+ E +D ++WN+ I+ H K L + M G R D F +A++
Sbjct: 567 EMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQT-GQRLDSFMYATV 625
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
L+A A +A+++ G ++HA +R L DV VG+ALV+MY+KCG + + + FN M RN
Sbjct: 626 LSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNS 685
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATG-IKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
SWN++I+ +A H G ALKLFE MK G PD VTF+G+L+AC+HAGL++EG +F
Sbjct: 686 YSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFE 745
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA-CRLR-R 486
SM +YG++P IEHF+C+ D+LGRAG+L + E++ +K P+ + ++ T+L A CR R
Sbjct: 746 SMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGR 805
Query: 487 DVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMI 546
+G++ A+ LF L+P YVLL N+YA+ G W D+ ARK +KD+ +KKE YS +
Sbjct: 806 KAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 865
Query: 547 EVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
++ F + SH I LK L+
Sbjct: 866 TMKDGVHMFVAGDKSHPDADVIYKKLKELN 895
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 142/473 (30%), Positives = 235/473 (49%), Gaps = 20/473 (4%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
H+ + K + DV + N+++N Y + G + ARKVFDEM RN VSW+ ++SG+ + GE
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 84 HLLALEFFSQM---HLLPNEYIFASAISACAGIQS--LVKGQQIHAYSLKFGYASISFVG 138
H AL F M + N+Y F S + AC I S ++ G+QIH K YA + V
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 139 NSLISMYMK-VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
N LISMY K +G AL +G+ N VS+N++I+ + + F +F M G
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 198 LPDRFSFAGGLEI-CSVSN-DLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
P ++F + CS++ D+R + C K L ++ FVG+ +++ ++K + A
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYA 262
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF-----TFASI- 309
K F +E ++ ++ N + E+ +F +M++ V P+ + +F
Sbjct: 263 RKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYS 322
Query: 310 LAACAGLASVQHGKQIHAHLIRMRL-NQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRN 368
LA GL + G+++H H+I L + VG+GN LVNMYAKCG I+ + ++F M ++
Sbjct: 323 LAEEVGL---KKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKD 379
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
VSWN++I + A++ ++ M+ I P S T I L++C K G+
Sbjct: 380 SVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHG 439
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
K GI ++ L+ L G L E + P D + +++ A
Sbjct: 440 ESLK-LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 162 bits (409), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 233/473 (49%), Gaps = 14/473 (2%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKC-GKMILARKVFDEMSERNLVSWSAMISGHH 79
G +H + K+ D +VSN ++++Y KC G + A F ++ +N VSW+++IS +
Sbjct: 123 GRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYS 182
Query: 80 QAGEHLLALEFFSQMHL---LPNEYIFASAI-SACAGIQSLVK-GQQIHAYSLKFGYASI 134
QAG+ A FS M P EY F S + +AC+ + V+ +QI K G +
Sbjct: 183 QAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTD 242
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLR 194
FVG+ L+S + K G S A V+ + N V+ N L+ G V + E+ ++F M
Sbjct: 243 LFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNS 302
Query: 195 Q-GLLPDRFS-FAGGLEICSVSND--LRKGMILHCLTVKCKL-ESNPFVGNTIMALYSKF 249
+ P+ + S++ + L+KG +H + L + +GN ++ +Y+K
Sbjct: 303 MIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKC 362
Query: 250 NLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASI 309
I +A + F + +KD +SWN+ I + + + +K M H + P FT S
Sbjct: 363 GSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRR-HDILPGSFTLISS 421
Query: 310 LAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNV 369
L++CA L + G+QIH +++ ++ +V V NAL+ +YA+ G ++ K+F+ M +
Sbjct: 422 LSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQ 481
Query: 370 VSWNTIIAAHA-NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFN 428
VSWN+II A A + R A+ F + G K + +TF +L+A + + G+ +
Sbjct: 482 VSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQ-IH 540
Query: 429 SMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+ I+ + LI G+ G++ E+ + +D + +++S
Sbjct: 541 GLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Score = 132 bits (331), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 194/405 (47%), Gaps = 12/405 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ S L C+ K + G +H LK+GI +V VSN ++ LYA+ G + RK+F M
Sbjct: 417 TLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM 476
Query: 64 SERNLVSWSAMISG----HHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKG 119
E + VSW+++I E ++ + N F+S +SA + + G
Sbjct: 477 PEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELG 536
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE-PNLVSFNALIAGFVE 178
+QIH +LK A + N+LI+ Y K G ++ E + V++N++I+G++
Sbjct: 537 KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIH 596
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N+ K ++ ML+ G D F +A L + L +GM +H +V+ LES+ V
Sbjct: 597 NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVV 656
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
G+ ++ +YSK + A + F + ++ SWN+ I+ + E+ L +F+ M D
Sbjct: 657 GSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQ 716
Query: 299 VRPDDFTFASILAACAGLASVQHG-KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
PD TF +L+AC+ ++ G K + L + + + ++ + G +
Sbjct: 717 TPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKL 776
Query: 358 YKLFNEM-LHRNVVSWNTIIAA--HANHR---LGGSALKLFEQMK 396
+M + NV+ W T++ A AN R LG A ++ Q++
Sbjct: 777 EDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLE 821
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 351 bits (901), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 190/579 (32%), Positives = 329/579 (56%), Gaps = 7/579 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQ--PDVIVSNHVLNLYAKCGKMILARKVFD 61
+ ++LL C+ +HA +K+G P + VSN +L Y + ++ LA +F+
Sbjct: 149 TFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFE 208
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVK 118
E+ E++ V+++ +I+G+ + G + ++ F +M P+++ F+ + A G+
Sbjct: 209 EIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFAL 268
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
GQQ+HA S+ G++ + VGN ++ Y K + +++ E E + VS+N +I+ + +
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
Q E F+ M G F FA L I + + L+ G LHC + +S V
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV 388
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
GN+++ +Y+K + EAE F+ + ++ +SW I+ + GL +F +M +
Sbjct: 389 GNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN- 447
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+R D TFA++L A A AS+ GKQ+HA +IR ++V G+ LV+MYAKCG I +
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
++F EM RN VSWN +I+AHA++ G +A+ F +M +G++PDSV+ +G+LTAC+H G
Sbjct: 508 QVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 567
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
V++G YF +M YGI+P +H+ C++DLLGR G+ EAE+ + P D I+ ++
Sbjct: 568 FVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSV 627
Query: 479 LSACRLRRDVVIGERLAKQLFHLQP-TTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
L+ACR+ ++ + ER A++LF ++ + YV +SN+YA+ G W V +K +++ G+
Sbjct: 628 LNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGI 687
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
KK P+YS +EV F+ + +H EI + L+
Sbjct: 688 KKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELT 726
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/507 (27%), Positives = 234/507 (46%), Gaps = 63/507 (12%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+ A ++K G D SN ++ + G++ ARKV+DEM +N VS + MISGH + G+
Sbjct: 35 VDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGD 94
Query: 84 HLLALEFFSQMH------------------------------------LLPNEYIFASAI 107
A + F M LP+ F + +
Sbjct: 95 VSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLL 154
Query: 108 SACAGIQSLVKGQQIHAYSLKFGYASISF--VGNSLISMYMKVGYSSDALLVYGEAFEPN 165
C Q+HA+++K G+ + F V N L+ Y +V A +++ E E +
Sbjct: 155 PGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKD 214
Query: 166 LVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHC 225
V+FN LI G+ ++ + +F M + G P F+F+G L+ +D G LH
Sbjct: 215 SVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHA 274
Query: 226 LTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEK 285
L+V + VGN I+ YSK + + E F + E D +S+N I++ S YE
Sbjct: 275 LSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEA 334
Query: 286 GLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALV 345
L F+EM G +F FA++L+ A L+S+Q G+Q+H + + + VGN+LV
Sbjct: 335 SLHFFREMQC-MGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLV 393
Query: 346 NMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV 405
+MYAKC + + +F + R VSW +I+ + L G+ LKLF +M+ + ++ D
Sbjct: 394 DMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQS 453
Query: 406 TFIGLLTACN-----------HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
TF +L A HA +++ G ++E + S L+D+ + G
Sbjct: 454 TFATVLKASASFASLLLGKQLHAFIIRSG-----NLENVFSGSG-------LVDMYAKCG 501
Query: 455 KLLEAEEYTKKFPLGQDPIVLGTLLSA 481
+ +A + ++ P ++ + L+SA
Sbjct: 502 SIKDAVQVFEEMP-DRNAVSWNALISA 527
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 33/128 (25%)
Query: 323 KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH--- 379
+++ A +I+ + D N +V + G +S + K+++EM H+N VS NT+I+ H
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 380 ----------------------------ANHRLGGSALKLFEQM--KATGIKPDSVTFIG 409
A + A KLF QM ++ PD VTF
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 410 LLTACNHA 417
LL CN A
Sbjct: 153 LLPGCNDA 160
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 350 bits (897), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 198/591 (33%), Positives = 327/591 (55%), Gaps = 20/591 (3%)
Query: 4 SISSLLHHCSK---TKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
++ S++ CS + L G +HA L+ G + + + N ++ +Y K GK+ ++ +
Sbjct: 201 TLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLL 259
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLV 117
R+LV+W+ ++S Q + L ALE+ +M L P+E+ +S + AC+ ++ L
Sbjct: 260 GSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLR 319
Query: 118 KGQQIHAYSLKFG-YASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
G+++HAY+LK G SFVG++L+ MY V+ F+ + +NA+IAG+
Sbjct: 320 TGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGY 379
Query: 177 VENQQPEKGFEVFKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+N+ ++ +F M GLL + + AG + C S + +H VK L+ +
Sbjct: 380 SQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRD 439
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
FV NT+M +YS+ I A + F +E++DL++WNT I +E L + +M N
Sbjct: 440 RFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQN 499
Query: 296 DH----------GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALV 345
++P+ T +IL +CA L+++ GK+IHA+ I+ L DV VG+ALV
Sbjct: 500 LERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALV 559
Query: 346 NMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV 405
+MYAKCG + S K+F+++ +NV++WN II A+ H G A+ L M G+KP+ V
Sbjct: 560 DMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEV 619
Query: 406 TFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKK 465
TFI + AC+H+G+V EG F M+ YG+ P +H+ C++DLLGRAG++ EA +
Sbjct: 620 TFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNM 679
Query: 466 FPLGQDPI-VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGD 524
P + +LL A R+ ++ IGE A+ L L+P S YVLL+N+Y+S G+W
Sbjct: 680 MPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDK 739
Query: 525 VAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
R+ +K+ G++KEP S IE KF + SH + +++ L+TL
Sbjct: 740 ATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETL 790
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 135/484 (27%), Positives = 251/484 (51%), Gaps = 23/484 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPD-VIVSNHVLNLYAKCGKMILARKVFDE 62
+ +LL + + ++ G +HA V K G D V V+N ++NLY KCG KVFD
Sbjct: 99 AFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR 158
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGI---QSL 116
+SERN VSW+++IS + +ALE F M ++ P+ + S ++AC+ + + L
Sbjct: 159 ISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGL 218
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF 176
+ G+Q+HAY L+ G + SF+ N+L++MY K+G + + ++ G +LV++N +++
Sbjct: 219 MMGKQVHAYGLRKGELN-SFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSL 277
Query: 177 VENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC-KLESN 235
+N+Q + E + M+ +G+ PD F+ + L CS LR G LH +K L+ N
Sbjct: 278 CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 337
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
FVG+ ++ +Y + + F + ++ + WN IA S ++ L +F M
Sbjct: 338 SFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEE 397
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
G+ + T A ++ AC + + IH +++ L++D V N L++MY++ G I
Sbjct: 398 SAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKID 457
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK-----------ATGIKPDS 404
+ ++F +M R++V+WNT+I + AL L +M+ +KP+S
Sbjct: 458 IAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNS 517
Query: 405 VTFIGLLTACNH-AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYT 463
+T + +L +C + L K E + +++ ++ D+ + L+D+ + G L + +
Sbjct: 518 ITLMTILPSCAALSALAKGKEIHAYAIKNN--LATDVAVGSALVDMYAKCGCLQMSRKVF 575
Query: 464 KKFP 467
+ P
Sbjct: 576 DQIP 579
Score = 176 bits (445), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 191/365 (52%), Gaps = 9/365 (2%)
Query: 98 PNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISF-VGNSLISMYMKVGYSSDALL 156
P+ Y F + + A A +Q + G+QIHA+ KFGY S V N+L+++Y K G
Sbjct: 95 PDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYK 154
Query: 157 VYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS---V 213
V+ E N VS+N+LI+ ++ E E F+ ML + + P F+ + CS +
Sbjct: 155 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM 214
Query: 214 SNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTF 273
L G +H ++ K E N F+ NT++A+Y K + ++ +DL++WNT
Sbjct: 215 PEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTV 273
Query: 274 IAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM- 332
+++ + L +EM + GV PD+FT +S+L AC+ L ++ GK++HA+ ++
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLE-GVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLF 392
L+++ VG+ALV+MY C + ++F+ M R + WN +IA ++ + AL LF
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 393 EQM-KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLG 451
M ++ G+ +S T G++ AC +G EA + K G+ D L+D+
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR-GLDRDRFVQNTLMDMYS 451
Query: 452 RAGKL 456
R GK+
Sbjct: 452 RLGKI 456
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 102/188 (54%), Gaps = 7/188 (3%)
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD-VGVGNALVNMYAKCGLISC 356
G++PD++ F ++L A A L ++ GKQIHAH+ + D V V N LVN+Y KCG
Sbjct: 92 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 151
Query: 357 SYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNH 416
YK+F+ + RN VSWN++I++ + AL+ F M ++P S T + ++TAC++
Sbjct: 152 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 211
Query: 417 AGLVKEGEAYFNSMEKTYGISP-DIEHF--TCLIDLLGRAGKLLEAEEYTKKFPLGQDPI 473
+ EG YG+ ++ F L+ + G+ GKL ++ F G+D +
Sbjct: 212 LPM-PEG-LMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFG-GRDLV 268
Query: 474 VLGTLLSA 481
T+LS+
Sbjct: 269 TWNTVLSS 276
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 346 bits (888), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 193/572 (33%), Positives = 311/572 (54%), Gaps = 4/572 (0%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+S +L C ++ + G SLHA +K + V V + +L++Y + GK+ + +VF EM
Sbjct: 111 LSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMP 170
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQ 121
RN V+W+A+I+G AG + L +FS+M L + Y FA A+ ACAG++ + G+
Sbjct: 171 FRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKA 230
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
IH + + G+ + V NSL +MY + G D L ++ E ++VS+ +LI + Q
Sbjct: 231 IHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQ 290
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
K E F M + P+ +FA C+ + L G LHC + L + V N+
Sbjct: 291 EVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNS 350
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+M +YS + A F+ + +D+ISW+T I E+G F M G +P
Sbjct: 351 MMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWM-RQSGTKP 409
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
DF AS+L+ +A ++ G+Q+HA + L Q+ V ++L+NMY+KCG I + +F
Sbjct: 410 TDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIF 469
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
E ++VS +I +A H A+ LFE+ G +PDSVTFI +LTAC H+G +
Sbjct: 470 GETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLD 529
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
G YFN M++TY + P EH+ C++DLL RAG+L +AE+ + +D +V TLL A
Sbjct: 530 LGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIA 589
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
C+ + D+ G R A+++ L PT + V L+N+Y+S G + A RK +K G+ KEP
Sbjct: 590 CKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEP 649
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLK 573
+S I+++ F + H + +I +L+
Sbjct: 650 GWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 230/458 (50%), Gaps = 17/458 (3%)
Query: 17 ALQQGISLHAAVLKMGIQPDVI-VSNHV---------LNLYAKCGKMILARKVFDEMSER 66
+Q+ + ++L+ ++ +++ +SN V L G + AR+VFD+M
Sbjct: 10 TIQRFCTTSISLLQKPVEENIVRISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHG 69
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLL-----PNEYIFASAISACAGIQSLVKGQQ 121
++VSW+++I + A AL FS M ++ P+ + + + AC ++ G+
Sbjct: 70 DIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGES 129
Query: 122 IHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQ 181
+HAY++K S +VG+SL+ MY +VG + V+ E N V++ A+I G V +
Sbjct: 130 LHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGR 189
Query: 182 PEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
++G F M R L D ++FA L+ C+ ++ G +H + + V N+
Sbjct: 190 YKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANS 249
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
+ +Y++ + + F + E+D++SW + I A K + F +M N V P
Sbjct: 250 LATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQ-VPP 308
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
++ TFAS+ +ACA L+ + G+Q+H +++ + LN + V N+++ MY+ CG + + LF
Sbjct: 309 NEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLF 368
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
M R+++SW+TII + G K F M+ +G KP LL+ + ++
Sbjct: 369 QGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVI- 427
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
EG +++ +G+ + + LI++ + G + EA
Sbjct: 428 EGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 148/293 (50%), Gaps = 13/293 (4%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++ +S+ C+ L G LH VL +G+ + VSN ++ +Y+ CG ++ A +F
Sbjct: 311 QTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQG 370
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKG 119
M R+++SWS +I G+ QAG ++FS M P ++ AS +S + + G
Sbjct: 371 MRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGG 430
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+Q+HA +L FG S V +SLI+MY K G +A +++GE ++VS A+I G+ E+
Sbjct: 431 RQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEH 490
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKG-----MILHCLTVKCKLES 234
+ ++ ++F+ L+ G PD +F L C+ S L G M+ ++ E
Sbjct: 491 GKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEH 550
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAACSHCADYEKG 286
++ L + + +AEK + +KD + W T + AC D E+G
Sbjct: 551 Y----GCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERG 599
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 345 bits (886), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 196/560 (35%), Positives = 315/560 (56%), Gaps = 5/560 (0%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G +H V+K G DV+V++ ++ +YAK + +VFDEM ER++ SW+ +IS +Q
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 81 AGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFV 137
+GE ALE F +M PN AISAC+ + L +G++IH +K G+ +V
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYV 245
Query: 138 GNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
++L+ MY K A V+ + +LV++N++I G+V + E+ M+ +G
Sbjct: 246 NSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGT 305
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
P + + L CS S +L G +H ++ + ++ +V +++ LY K AE
Sbjct: 306 RPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAET 365
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F ++ SWN I++ ++ K + V+ +M + GV+PD TF S+L AC+ LA
Sbjct: 366 VFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVS-VGVKPDVVTFTSVLPACSQLA 424
Query: 318 SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIA 377
+++ GKQIH + RL D + +AL++MY+KCG ++++FN + ++VVSW +I+
Sbjct: 425 ALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMIS 484
Query: 378 AHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGIS 437
A+ +H AL F++M+ G+KPD VT + +L+AC HAGL+ EG +F+ M YGI
Sbjct: 485 AYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIE 544
Query: 438 PDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPI-VLGTLLSACRLRRDVVIGERLAK 496
P IEH++C+ID+LGRAG+LLEA E ++ P D +L TL SAC L + +G+R+A+
Sbjct: 545 PIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIAR 604
Query: 497 QLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFT 556
L P S Y++L NLYAS W R +K+ GL+K+P S IE+ F
Sbjct: 605 LLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFF 664
Query: 557 VAEFSHSKIGEINYMLKTLS 576
+ SH + + L LS
Sbjct: 665 AEDRSHLRAENVYECLALLS 684
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 246/481 (51%), Gaps = 9/481 (1%)
Query: 7 SLLHHCSK-TKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
SLL C+ TK+L++ +H +L +G++ DV++ ++N+Y C AR VF+
Sbjct: 8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDI 67
Query: 66 RNLVS-WSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQ 120
R+ V W++++SG+ + LE F ++ +P+ + F + I A + G+
Sbjct: 68 RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGR 127
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
IH +K GY V +SL+ MY K ++L V+ E E ++ S+N +I+ F ++
Sbjct: 128 MIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSG 187
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ EK E+F M G P+ S + CS L +G +H VK E + +V +
Sbjct: 188 EAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNS 247
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y K + + A + F+ + K L++WN+ I D + + + M + G R
Sbjct: 248 ALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIE-GTR 306
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKL 360
P T SIL AC+ ++ HGK IH ++IR +N D+ V +L+++Y KCG + + +
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETV 366
Query: 361 FNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLV 420
F++ SWN +I+++ + A+++++QM + G+KPD VTF +L AC+ +
Sbjct: 367 FSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAAL 426
Query: 421 KEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
++G+ S+ ++ + D + L+D+ + G EA P +D + ++S
Sbjct: 427 EKGKQIHLSISESR-LETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMIS 484
Query: 481 A 481
A
Sbjct: 485 A 485
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +S+L CS+ AL++G +H ++ + ++ D ++ + +L++Y+KCG A ++F+ +
Sbjct: 412 TFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSI 471
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISAC 110
++++VSW+ MIS + G+ AL F +M L P+ + +SAC
Sbjct: 472 PKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSAC 521
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 345 bits (884), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 207/590 (35%), Positives = 316/590 (53%), Gaps = 32/590 (5%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+S+L C+ L+ G LHA LK D IV L++YAKC M A+ +FD
Sbjct: 285 ASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSEN 344
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQI 122
N S++AMI+G+ Q AL F ++ L +E + ACA ++ L +G QI
Sbjct: 345 LNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQI 404
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
+ ++K + V N+ I MY K ++A V+ E + VS+NA+IA ++Q
Sbjct: 405 YGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA---HEQN 461
Query: 183 EKGFE---VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
KG+E +F MLR + PD F+F L+ C+ L GM +H VK + SN VG
Sbjct: 462 GKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKSGMASNSSVG 520
Query: 240 NTIMALYSKFNLIGEAEKAF-RLIEEKDL-------------------ISWNTFIAACSH 279
+++ +YSK +I EAEK R + ++ +SWN+ I+
Sbjct: 521 CSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVM 580
Query: 280 CADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG 339
E +F M + G+ PD FT+A++L CA LAS GKQIHA +I+ L DV
Sbjct: 581 KEQSEDAQMLFTRMM-EMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVY 639
Query: 340 VGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG 399
+ + LV+MY+KCG + S +F + L R+ V+WN +I +A+H G A++LFE+M
Sbjct: 640 ICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILEN 699
Query: 400 IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
IKP+ VTFI +L AC H GL+ +G YF M++ YG+ P + H++ ++D+LG++GK+ A
Sbjct: 700 IKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRA 759
Query: 460 EEYTKKFPLGQDPIVLGTLLSACRL-RRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYAS 518
E ++ P D ++ TLL C + R +V + E L L P +S Y LLSN+YA
Sbjct: 760 LELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYAD 819
Query: 519 DGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
GMW V+ R+ ++ LKKEP S +E++ F V + +H + EI
Sbjct: 820 AGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEI 869
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/481 (29%), Positives = 244/481 (50%), Gaps = 32/481 (6%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
++ + +L CS + G+ +H V+++G DV+ ++ +L++YAK + + + +VF
Sbjct: 180 GRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQ 239
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLP---NEYIFASAISACAGIQSLVK 118
+ E+N VSWSA+I+G Q LAL+FF +M + ++ I+AS + +CA + L
Sbjct: 240 GIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRL 299
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G Q+HA++LK +A+ V + + MY K DA +++ + N S+NA+I G+ +
Sbjct: 300 GGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQ 359
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ K +F ++ GL D S +G C++ L +G+ ++ L +K L + V
Sbjct: 360 EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCV 419
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N + +Y K + EA + F + +D +SWN IAA + L +F M
Sbjct: 420 ANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSR- 478
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS- 357
+ PD+FTF SIL AC G S+ +G +IH+ +++ + + VG +L++MY+KCG+I +
Sbjct: 479 IEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAE 537
Query: 358 -------------------YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
K+ N+ L VSWN+II+ + A LF +M
Sbjct: 538 KIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEM 597
Query: 399 GIKPDSVTFIGLLTACNH---AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGK 455
GI PD T+ +L C + AGL K+ A E + D+ + L+D+ + G
Sbjct: 598 GITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE----LQSDVYICSTLVDMYSKCGD 653
Query: 456 L 456
L
Sbjct: 654 L 654
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 142/497 (28%), Positives = 235/497 (47%), Gaps = 37/497 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S + C+K AL+ G HA ++ G +P V N +L +Y + A VFD+M
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 64 SERNLVSWSAMI-------------------------------SGHHQAGEHLLALEFFS 92
R++VSW+ MI SG+ Q GE L ++E F
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Query: 93 QMHLLPNEY---IFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVG 149
M E+ FA + C+ ++ G QIH ++ G + ++L+ MY K
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 229
Query: 150 YSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLE 209
++L V+ E N VS++A+IAG V+N + FK M + + +A L
Sbjct: 230 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLR 289
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
C+ ++LR G LH +K ++ V + +Y+K + + +A+ F E + S
Sbjct: 290 SCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQS 349
Query: 270 WNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHL 329
+N I S K L +F + + G+ D+ + + + ACA + + G QI+
Sbjct: 350 YNAMITGYSQEEHGFKALLLFHRLMSS-GLGFDEISLSGVFRACALVKGLSEGLQIYGLA 408
Query: 330 IRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSAL 389
I+ L+ DV V NA ++MY KC ++ ++++F+EM R+ VSWN IIAAH + G L
Sbjct: 409 IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETL 468
Query: 390 KLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDL 449
LF M + I+PD TF +L AC G + G +S+ K+ G++ + LID+
Sbjct: 469 FLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKS-GMASNSSVGCSLIDM 526
Query: 450 LGRAGKLLEAEEYTKKF 466
+ G + EAE+ +F
Sbjct: 527 YSKCGMIEEAEKIHSRF 543
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 342 bits (877), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 188/578 (32%), Positives = 317/578 (54%), Gaps = 12/578 (2%)
Query: 9 LHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNL 68
L C + L G LH V+ G+ V + N ++++Y+KCGK+ A +FD ER+
Sbjct: 155 LGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQ 214
Query: 69 VSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACA---GIQSLVKGQQI 122
VSW+++ISG+ + G L ++MH L Y S + AC + KG I
Sbjct: 215 VSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAI 274
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE---- 178
H Y+ K G V +L+ MY K G +A+ ++ N+V++NA+I+GF++
Sbjct: 275 HCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEI 334
Query: 179 -NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
++ + F++F M R+GL P +F+ L+ CS + L G +H L K +S+ F
Sbjct: 335 TDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEF 394
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
+G+ ++ LY+ + + F ++D+ SW + I E +F+++ + H
Sbjct: 395 IGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSH 454
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
+RP+++T + +++ACA A++ G+QI + I+ ++ V + ++MYAK G + +
Sbjct: 455 -IRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLA 513
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++F E+ + +V +++ +I++ A H AL +FE MK GIKP+ F+G+L AC H
Sbjct: 514 NQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHG 573
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
GLV +G YF M+ Y I+P+ +HFTCL+DLLGR G+L +AE P+
Sbjct: 574 GLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRA 633
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LLS+CR+ +D VIG+R+A++L L+P + YVLL N+Y G+ R++++D G+
Sbjct: 634 LLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGV 693
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
KKEP+ S I + F VA+ SH I ML+T+
Sbjct: 694 KKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 216/426 (50%), Gaps = 21/426 (4%)
Query: 46 LYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFF---SQMHLLPNEYI 102
+Y KC ++ AR++FD M ERN++S++++ISG+ Q G + A+E F + +L +++
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+A A+ C L G+ +H + G + F+ N LI MY K G A+ ++
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSND---LRK 219
E + VS+N+LI+G+V E+ + M R GL ++ L+ C ++ + + K
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 220 GMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSH 279
GM +HC T K +E + V ++ +Y+K + EA K F L+ K+++++N I+
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQ 330
Query: 280 CADY-----EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRL 334
+ + +F +M G+ P TF+ +L AC+ ++++G+QIHA + +
Sbjct: 331 MDEITDEASSEAFKLFMDMQR-RGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNF 389
Query: 335 NQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQ 394
D +G+AL+ +YA G + F +++ SW ++I H + SA LF Q
Sbjct: 390 QSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQ 449
Query: 395 MKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCL----IDLL 450
+ ++ I+P+ T +++AC + GE + Y I I+ FT + I +
Sbjct: 450 LFSSHIRPEEYTVSLMMSACADFAALSSGEQI-----QGYAIKSGIDAFTSVKTSSISMY 504
Query: 451 GRAGKL 456
++G +
Sbjct: 505 AKSGNM 510
Score = 135 bits (341), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 159/318 (50%), Gaps = 9/318 (2%)
Query: 115 SLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIA 174
S+V G+ H + +K ++ N+L++MY K A ++ E N++SFN+LI+
Sbjct: 62 SVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLIS 121
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
G+ + E+ E+F L D+F++AG L C DL G +LH L V L
Sbjct: 122 GYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQ 181
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
F+ N ++ +YSK + +A F +E+D +SWN+ I+ E+ L++ +M
Sbjct: 182 QVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMH 241
Query: 295 NDHGVRPDDFTFASILAACA---GLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
D G+ + S+L AC ++ G IH + ++ + D+ V AL++MYAK
Sbjct: 242 RD-GLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKN 300
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAA-----HANHRLGGSALKLFEQMKATGIKPDSVT 406
G + + KLF+ M +NVV++N +I+ A KLF M+ G++P T
Sbjct: 301 GSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPST 360
Query: 407 FIGLLTACNHAGLVKEGE 424
F +L AC+ A ++ G
Sbjct: 361 FSVVLKACSAAKTLEYGR 378
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 135/279 (48%), Gaps = 5/279 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S +L CS K L+ G +HA + K Q D + + ++ LYA G + F
Sbjct: 360 TFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFAST 419
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
S++++ SW++MI H Q + A + F Q+ H+ P EY + +SACA +L G+
Sbjct: 420 SKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGE 479
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
QI Y++K G + + V S ISMY K G A V+ E P++ +++A+I+ ++
Sbjct: 480 QIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHG 539
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGM-ILHCLTVKCKLESNPFVG 239
+ +F+ M G+ P++ +F G L C + +G+ C+ ++ N
Sbjct: 540 SANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHF 599
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKD-LISWNTFIAAC 277
++ L + + +AE +D ++W +++C
Sbjct: 600 TCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSC 638
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 1/158 (0%)
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D + + A SV GK H H+I+ LN + + N L+NMY KC + + +LF
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 105
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ M RN++S+N++I+ + A++LF + + +K D T+ G L C +
Sbjct: 106 DRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLD 165
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
GE + + G+S + LID+ + GKL +A
Sbjct: 166 LGE-LLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQA 202
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 341 bits (874), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 185/578 (32%), Positives = 318/578 (55%), Gaps = 5/578 (0%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +L C+ + G+ LH V+ G+ + + N +L++Y+KCG+ A K+F
Sbjct: 239 AVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFR 298
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
MS + V+W+ MISG+ Q+G +L FF +M +LP+ F+S + + + ++L
Sbjct: 299 MMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEY 358
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+QIH Y ++ + F+ ++LI Y K S A ++ + ++V F A+I+G++
Sbjct: 359 CKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLH 418
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
N E+F+ +++ + P+ + L + + L+ G LH +K ++ +
Sbjct: 419 NGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNI 478
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
G ++ +Y+K + A + F + ++D++SWN+ I C+ + + +F++M G
Sbjct: 479 GCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVS-G 537
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
+ D + ++ L+ACA L S GK IH +I+ L DV + L++MYAKCG + +
Sbjct: 538 ICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAM 597
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTACNHA 417
+F M +N+VSWN+IIAA NH +L LF +M + +GI+PD +TF+ ++++C H
Sbjct: 598 NVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHV 657
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
G V EG +F SM + YGI P EH+ C++DL GRAG+L EA E K P D V GT
Sbjct: 658 GDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGT 717
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL ACRL ++V + E + +L L P+ + YVL+SN +A+ W V R ++K+ +
Sbjct: 718 LLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREV 777
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+K P YS IE+ F + +H + I +L +L
Sbjct: 778 QKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSL 815
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/478 (25%), Positives = 234/478 (48%), Gaps = 6/478 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
L+ C K + L V +G+ + V++ ++ Y + GK+ + K+FD + +++
Sbjct: 144 LVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKD 203
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHA 124
V W+ M++G+ + G ++ FS M + PN F +S CA + G Q+H
Sbjct: 204 CVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHG 263
Query: 125 YSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEK 184
+ G + NSL+SMY K G DA ++ + V++N +I+G+V++ E+
Sbjct: 264 LVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEE 323
Query: 185 GFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
F M+ G+LPD +F+ L S +L +HC ++ + + F+ + ++
Sbjct: 324 SLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALID 383
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
Y K + A+ F D++ + I+ H Y L +F+ + + P++
Sbjct: 384 AYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK-ISPNEI 442
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T SIL L +++ G+++H +I+ + +G A+++MYAKCG ++ +Y++F +
Sbjct: 443 TLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL 502
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
R++VSWN++I A +A+ +F QM +GI D V+ L+AC + G+
Sbjct: 503 SKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGK 562
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
A M K + ++ D+ + LID+ + G L A K ++ + ++++AC
Sbjct: 563 AIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAAC 618
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/488 (23%), Positives = 234/488 (47%), Gaps = 10/488 (2%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
+ + +S LL CS L+QG +HA ++ I D +L +YA CG K+F
Sbjct: 34 IPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMF 93
Query: 61 DEMSER--NLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQS 115
+ R ++ W+++IS + G AL F+ +M P+ F + AC +++
Sbjct: 94 YRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKN 153
Query: 116 LVKGQQIHAYSL-KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIA 174
KG + ++ G FV +SLI Y++ G ++ + + V +N ++
Sbjct: 154 F-KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLN 212
Query: 175 GFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLES 234
G+ + + + F +M + P+ +F L +C+ + G+ LH L V ++
Sbjct: 213 GYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDF 272
Query: 235 NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
+ N+++++YSK +A K FR++ D ++WN I+ E+ L+ F EM
Sbjct: 273 EGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMI 332
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
+ GV PD TF+S+L + + ++++ KQIH +++R ++ D+ + +AL++ Y KC +
Sbjct: 333 SS-GVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGV 391
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
S + +F++ +VV + +I+ + ++ L +L++F + I P+ +T + +L
Sbjct: 392 SMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVI 451
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
+K G + K G +ID+ + G++ A E ++ +D +
Sbjct: 452 GILLALKLGRELHGFIIKK-GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVS 509
Query: 475 LGTLLSAC 482
++++ C
Sbjct: 510 WNSMITRC 517
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 340 bits (873), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 195/587 (33%), Positives = 322/587 (54%), Gaps = 18/587 (3%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + S+ L C ++ G+ L + V+K G++ D++V N + +Y++ G AR+VFD
Sbjct: 174 AFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFD 233
Query: 62 EMSERNLVSWSAMISGHHQAGEH-LLALEFFSQMH---LLPNEYIFASAISACAGIQSLV 117
EMS ++++SW++++SG Q G A+ F M + + F S I+ C L
Sbjct: 234 EMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLK 293
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+QIH +K GY S+ VGN L+S Y K G V+ + E N+VS+ +I+
Sbjct: 294 LARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS--- 350
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ +F M G+ P+ +F G + + +++G+ +H L +K S P
Sbjct: 351 --SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPS 408
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
VGN+ + LY+KF + +A+KAF I +++ISWN I+ + + L +F +S
Sbjct: 409 VGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF--LSAAA 466
Query: 298 GVRPDDFTFASILAACAGLA--SVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
P+++TF S+L A A SV+ G++ HAHL+++ LN V +AL++MYAK G I
Sbjct: 467 ETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNID 526
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
S K+FNEM +N W +II+A+++H + + LF +M + PD VTF+ +LTACN
Sbjct: 527 ESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACN 586
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
G+V +G FN M + Y + P EH++C++D+LGRAG+L EAEE + P G +L
Sbjct: 587 RKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESML 646
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
++L +CRL +V +G ++A+ ++P + YV + N+YA W A RK ++
Sbjct: 647 QSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKK 706
Query: 536 GLKKEPSYSMIEVQG-----TFEKFTVAEFSHSKIGEINYMLKTLSL 577
+ KE +S I+V T + F+ + SH K EI M++ + L
Sbjct: 707 NVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGL 753
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 128/452 (28%), Positives = 234/452 (51%), Gaps = 21/452 (4%)
Query: 18 LQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISG 77
L++G +H G V VSN V+ +Y K G+ A +F+ + + ++VSW+ ++SG
Sbjct: 92 LKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSG 151
Query: 78 HHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASI 134
++ +AL F +M ++ + + +++A+S C G + + G Q+ + +K G S
Sbjct: 152 FD---DNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESD 208
Query: 135 SFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE---VFKL 191
VGNS I+MY + G A V+ E +++S+N+L++G +Q+ GFE +F+
Sbjct: 209 LVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGL--SQEGTFGFEAVVIFRD 266
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
M+R+G+ D SF + C DL+ +H L +K ES VGN +M+ YSK +
Sbjct: 267 MMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGV 326
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ + F + E++++SW T I+ ++ + +S+F M D GV P++ TF ++
Sbjct: 327 LEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFD-GVYPNEVTFVGLIN 380
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
A ++ G +IH I+ + VGN+ + +YAK + + K F ++ R ++S
Sbjct: 381 AVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIIS 440
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG--LVKEGEAYFNS 429
WN +I+ A + ALK+F A + P+ TF +L A A VK+G+
Sbjct: 441 WNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAH 499
Query: 430 MEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
+ K G++ + L+D+ + G + E+E+
Sbjct: 500 LLK-LGLNSCPVVSSALLDMYAKRGNIDESEK 530
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 194/382 (50%), Gaps = 29/382 (7%)
Query: 55 LARKVFDEMSERNLVSWSAMISGHHQAGEHLL------ALEFFSQMHLLP------NEYI 102
+A K+FD S+RN A S +H E L AL F + L +E
Sbjct: 26 IAHKLFDGSSQRN-----ATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVT 80
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
A+ AC G L +G QIH +S G+ S V N+++ MY K G +AL ++
Sbjct: 81 LCLALKACRG--DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLV 138
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
+P++VS+N +++GF +NQ M G++ D F+++ L C S G+
Sbjct: 139 DPDVVSWNTILSGFDDNQ---IALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQ 195
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
L VK LES+ VGN+ + +YS+ A + F + KD+ISWN+ ++ S
Sbjct: 196 LQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGT 255
Query: 283 YE-KGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG 341
+ + + +F++M + GV D +F S++ C ++ +QIH I+ + VG
Sbjct: 256 FGFEAVVIFRDMMRE-GVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVG 314
Query: 342 NALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIK 401
N L++ Y+KCG++ +F++M RNVVSW T+I+++ + A+ +F M+ G+
Sbjct: 315 NILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKD-----DAVSIFLNMRFDGVY 369
Query: 402 PDSVTFIGLLTACNHAGLVKEG 423
P+ VTF+GL+ A +KEG
Sbjct: 370 PNEVTFVGLINAVKCNEQIKEG 391
>sp|Q9LR69|PPR8_ARATH Pentatricopeptide repeat-containing protein At1g03540
OS=Arabidopsis thaliana GN=PCMP-E4 PE=2 SV=1
Length = 609
Score = 340 bits (871), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 190/553 (34%), Positives = 306/553 (55%), Gaps = 11/553 (1%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGK-MILARKVFD 61
K +SLL C+K + GI HA V+K G++ D V N +L+LY K G M R+VFD
Sbjct: 62 KLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFD 121
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
++ +SW++M+SG+ EH+ ALE F +M L NE+ +SA+ AC+ + +
Sbjct: 122 GRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRL 181
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ H + G+ F+ ++L +Y DA V+ E EP+++ + A+++ F +
Sbjct: 182 GRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSK 241
Query: 179 NQQPEKGFEVFKLMLR-QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
N E+ +F M R +GL+PD +F L C L++G +H + + SN
Sbjct: 242 NDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVV 301
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V ++++ +Y K + EA + F + +K+ +SW+ + ++EK + +F+EM
Sbjct: 302 VESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK- 360
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
D + F ++L ACAGLA+V+ GK+IH +R +V V +AL+++Y K G I +
Sbjct: 361 ----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSA 416
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
+++++M RN+++WN +++A A + G A+ F M GIKPD ++FI +LTAC H
Sbjct: 417 SRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHT 476
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
G+V EG YF M K+YGI P EH++C+IDLLGRAG EAE ++ D + G
Sbjct: 477 GMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGV 536
Query: 478 LLSACRLRRDVV-IGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSG 536
LL C D + ER+AK++ L+P YVLLSN+Y + G GD RK++ G
Sbjct: 537 LLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRG 596
Query: 537 LKKEPSYSMIEVQ 549
+ K S I+
Sbjct: 597 VAKTVGQSWIDAH 609
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 339 bits (870), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 188/576 (32%), Positives = 314/576 (54%), Gaps = 12/576 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
+SL+ + L+Q +HA +L +G+Q + +++ + G + AR+VFD++
Sbjct: 25 ASLIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPR 81
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQI 122
+ W+A+I G+ + AL +S M L P+ + F + AC+G+ L G+ +
Sbjct: 82 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 141
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF---EPNLVSFNALIAGFVEN 179
HA + G+ + FV N LI++Y K A V+ E E +VS+ A+++ + +N
Sbjct: 142 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVF-EGLPLPERTIVSWTAIVSAYAQN 200
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+P + E+F M + + PD + L + DL++G +H VK LE P +
Sbjct: 201 GEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLL 260
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ +Y+K + A+ F ++ +LI WN I+ + + + +F EM N V
Sbjct: 261 ISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINK-DV 319
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
RPD + S ++ACA + S++ + ++ ++ R DV + +AL++M+AKCG + +
Sbjct: 320 RPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARL 379
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F+ L R+VV W+ +I + H A+ L+ M+ G+ P+ VTF+GLL ACNH+G+
Sbjct: 380 VFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGM 439
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V+EG +FN M + I+P +H+ C+IDLLGRAG L +A E K P+ V G LL
Sbjct: 440 VREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALL 498
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
SAC+ R V +GE A+QLF + P+ T YV LSNLYA+ +W VA R +K+ GL K
Sbjct: 499 SACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNK 558
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+ S +EV+G E F V + SH + EI ++ +
Sbjct: 559 DVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWI 594
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 178/348 (51%), Gaps = 22/348 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMG--IQPDVIVSNHVLNLYAKCGKMILARKVFD 61
++ S+L+ + + L+QG S+HA+V+KMG I+PD+++S + +YAKCG++ A+ +FD
Sbjct: 224 ALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS--LNTMYAKCGQVATAKILFD 281
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
+M NL+ W+AMISG+ + G A++ F +M + P+ SAISACA + SL +
Sbjct: 282 KMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQ 341
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+ ++ Y + Y F+ ++LI M+ K G A LV+ + ++V ++A+I G+
Sbjct: 342 ARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGL 401
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ + + +++ M R G+ P+ +F G L C+ S +R+G K+
Sbjct: 402 HGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQH 461
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIE----EKDLISWNTFIAACSHCADYEKGLSVFKEMS 294
++ L + G ++A+ +I+ + + W ++AC E G +++
Sbjct: 462 YACVIDLLGR---AGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLF 518
Query: 295 NDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR---LNQDVG 339
+ + S L A A L ++ +RM+ LN+DVG
Sbjct: 519 SIDPSNTGHYVQLSNLYAAARL-----WDRVAEVRVRMKEKGLNKDVG 561
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 339 bits (870), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 189/574 (32%), Positives = 308/574 (53%), Gaps = 5/574 (0%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDE 62
++ S+L C + + G +H LK G DV V+ +++LY++ + AR +FDE
Sbjct: 154 RTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDE 210
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQI 122
M R++ SW+AMISG+ Q+G AL + + + + S +SAC +G I
Sbjct: 211 MPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM-DSVTVVSLLSACTEAGDFNRGVTI 269
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H+YS+K G S FV N LI +Y + G D V+ + +L+S+N++I + N+QP
Sbjct: 270 HSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQP 329
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTV-KCKLESNPFVGNT 241
+ +F+ M + PD + I S D+R + T+ K + +GN
Sbjct: 330 LRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNA 389
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y+K L+ A F + D+ISWNT I+ + + + ++ M + +
Sbjct: 390 VVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAA 449
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
+ T+ S+L AC+ +++ G ++H L++ L DV V +L +MY KCG + + LF
Sbjct: 450 NQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLF 509
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
++ N V WNT+IA H H G A+ LF++M G+KPD +TF+ LL+AC+H+GLV
Sbjct: 510 YQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVD 569
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSA 481
EG+ F M+ YGI+P ++H+ C++D+ GRAG+L A ++ K L D + G LLSA
Sbjct: 570 EGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 629
Query: 482 CRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEP 541
CR+ +V +G+ ++ LF ++P +VLLSN+YAS G W V R + GL+K P
Sbjct: 630 CRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTP 689
Query: 542 SYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
+S +EV E F +H E+ L L
Sbjct: 690 GWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTAL 723
Score = 218 bits (556), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 136/471 (28%), Positives = 248/471 (52%), Gaps = 20/471 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ +L +C+ LQ LHA ++ +V +S ++NLY G + LAR FD +
Sbjct: 56 DVHTLFRYCTN---LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHI 112
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFS----QMHLLPNEYIFASAISACAGIQSLVKG 119
R++ +W+ MISG+ +AG + FS L P+ F S + AC ++++ G
Sbjct: 113 QNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDG 169
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+IH +LKFG+ +V SLI +Y + +A +++ E ++ S+NA+I+G+ ++
Sbjct: 170 NKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQS 229
Query: 180 QQPEKGFEVFKLMLRQGLLP-DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
++ L L GL D + L C+ + D +G+ +H ++K LES FV
Sbjct: 230 GNAKEA-----LTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFV 284
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N ++ LY++F + + +K F + +DLISWN+ I A + +S+F+EM
Sbjct: 285 SNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSR- 343
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKCGLISCS 357
++PD T S+ + + L ++ + + +R +D+ +GNA+V MYAK GL+ +
Sbjct: 344 IQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSA 403
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG-IKPDSVTFIGLLTACNH 416
+FN + + +V+SWNTII+ +A + A++++ M+ G I + T++ +L AC+
Sbjct: 404 RAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQ 463
Query: 417 AGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
AG +++G + K G+ D+ T L D+ G+ G+L +A + P
Sbjct: 464 AGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP 513
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 338 bits (867), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 204/580 (35%), Positives = 312/580 (53%), Gaps = 7/580 (1%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLK-MGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
A ++ LL + +++ G +HA ++K + P ++N+++N+Y+K AR V
Sbjct: 6 ADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVL 65
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLV 117
RN+VSW+++ISG Q G AL F +M ++PN++ F A A A ++ V
Sbjct: 66 RLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPV 125
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+QIHA ++K G FVG S MY K DA ++ E E NL ++NA I+ V
Sbjct: 126 TGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSV 185
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
+ +P + E F R P+ +F L CS L GM LH L ++ +++
Sbjct: 186 TDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVS 245
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
V N ++ Y K I +E F + K+ +SW + +AA + EK SV S
Sbjct: 246 VCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKA-SVLYLRSRKD 304
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
V DF +S+L+ACAG+A ++ G+ IHAH ++ + + + VG+ALV+MY KCG I S
Sbjct: 305 IVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDS 364
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM--KATGIKPDSVTFIGLLTACN 415
+ F+EM +N+V+ N++I +A+ AL LFE+M + G P+ +TF+ LL+AC+
Sbjct: 365 EQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACS 424
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
AG V+ G F+SM TYGI P EH++C++D+LGRAG + A E+ KK P+ V
Sbjct: 425 RAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVW 484
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
G L +ACR+ +G A+ LF L P + +VLLSN +A+ G W + R+ LK
Sbjct: 485 GALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGV 544
Query: 536 GLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
G+KK YS I V+ F + SH EI L L
Sbjct: 545 GIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKL 584
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 337 bits (865), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 200/612 (32%), Positives = 320/612 (52%), Gaps = 52/612 (8%)
Query: 12 CSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSW 71
C + +++ G S HA L G +V V N ++ +Y++C + ARKVFDEMS ++VSW
Sbjct: 137 CGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSW 196
Query: 72 SAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQQIHAYSL 127
+++I + + G+ +ALE FS+M P+ + + CA + + G+Q+H +++
Sbjct: 197 NSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAV 256
Query: 128 KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGF----------- 176
FVGN L+ MY K G +A V+ ++VS+NA++AG+
Sbjct: 257 TSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVR 316
Query: 177 -VENQQPEK--------------------GFE---VFKLMLRQGLLPDRFSFAGGLEICS 212
E Q EK G+E V + ML G+ P+ + L C+
Sbjct: 317 LFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA 376
Query: 213 VSNDLRKGMILHCLTVKCKLE-------SNPFVGNTIMALYSKFNLIGEAEKAFRLI--E 263
L G +HC +K ++ V N ++ +Y+K + A F + +
Sbjct: 377 SVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPK 436
Query: 264 EKDLISWNTFIAACSHCADYEKGLSVFKEM-SNDHGVRPDDFTFASILAACAGLASVQHG 322
E+D+++W I S D K L + EM D RP+ FT + L ACA LA+++ G
Sbjct: 437 ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIG 496
Query: 323 KQIHAHLIRMRLNQ-DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHAN 381
KQIHA+ +R + N + V N L++MYAKCG IS + +F+ M+ +N V+W +++ +
Sbjct: 497 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGM 556
Query: 382 HRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIE 441
H G AL +F++M+ G K D VT + +L AC+H+G++ +G YFN M+ +G+SP E
Sbjct: 557 HGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPE 616
Query: 442 HFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHL 501
H+ CL+DLLGRAG+L A ++ P+ P+V LS CR+ V +GE A+++ L
Sbjct: 617 HYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITEL 676
Query: 502 QPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIE-VQGTFEKFTVAEF 560
Y LLSNLYA+ G W DV R +++ G+KK P S +E ++GT F V +
Sbjct: 677 ASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGT-TTFFVGDK 735
Query: 561 SHSKIGEINYML 572
+H EI +L
Sbjct: 736 THPHAKEIYQVL 747
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 229/498 (45%), Gaps = 52/498 (10%)
Query: 14 KTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM--SERNLVSW 71
K K + Q +H +L GI + +++H+++ Y G + A + S+ + W
Sbjct: 37 KCKTISQVKLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHW 95
Query: 72 SAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQIHAYSLK 128
+++I + G L F MH L P+ Y F AC I S+ G+ HA SL
Sbjct: 96 NSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLV 155
Query: 129 FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV 188
G+ S FVGN+L++MY + SDA V+ E ++VS+N++I + + +P+ E+
Sbjct: 156 TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEM 215
Query: 189 FKLMLRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYS 247
F M + G PD + L C+ G LHC V ++ N FVGN ++ +Y+
Sbjct: 216 FSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYA 275
Query: 248 KFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH---------- 297
K ++ EA F + KD++SWN +A S +E + +F++M +
Sbjct: 276 KCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSA 335
Query: 298 ------------------------GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMR 333
G++P++ T S+L+ CA + ++ HGK+IH + I+
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395
Query: 334 LN-------QDVGVGNALVNMYAKCGLISCSYKLFNEM--LHRNVVSWNTIIAAHANHRL 384
++ + V N L++MYAKC + + +F+ + R+VV+W +I ++ H
Sbjct: 396 IDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455
Query: 385 GGSALKLFEQM--KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEH 442
AL+L +M + +P++ T L AC ++ G+ + + +
Sbjct: 456 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFV 515
Query: 443 FTCLIDLLGRAGKLLEAE 460
CLID+ + G + +A
Sbjct: 516 SNCLIDMYAKCGSISDAR 533
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 186/361 (51%), Gaps = 9/361 (2%)
Query: 114 QSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPN---LVSFN 170
+++ + + IH L FG +++ + LIS Y+ VG S A+ + F P+ + +N
Sbjct: 39 KTISQVKLIHQKLLSFGILTLNLTSH-LISTYISVGCLSHAVSLL-RRFPPSDAGVYHWN 96
Query: 171 ALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC 230
+LI + +N K +F LM PD ++F + C + +R G H L++
Sbjct: 97 SLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVT 156
Query: 231 KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVF 290
SN FVGN ++A+YS+ + +A K F + D++SWN+ I + + + L +F
Sbjct: 157 GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMF 216
Query: 291 KEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
M+N+ G RPD+ T ++L CA L + GKQ+H + + Q++ VGN LV+MYAK
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAK 276
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGL 410
CG++ + +F+ M ++VVSWN ++A ++ A++LFE+M+ IK D VT+
Sbjct: 277 CGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAA 336
Query: 411 LTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE---YTKKFP 467
++ GL E M + GI P+ ++ G L+ +E Y K+P
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSS-GIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395
Query: 468 L 468
+
Sbjct: 396 I 396
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/507 (22%), Positives = 213/507 (42%), Gaps = 96/507 (18%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L C+ G LH + + ++ V N ++++YAKCG M A VF M
Sbjct: 231 TLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM 290
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---------------------------- 95
S +++VSW+AM++G+ Q G A+ F +M
Sbjct: 291 SVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEAL 350
Query: 96 ----------LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKF-------GYASISFVG 138
+ PNE S +S CA + +L+ G++IH Y++K+ G+ + V
Sbjct: 351 GVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVI 410
Query: 139 NSLISMYMKVGYSSDALLVYG--EAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQG 196
N LI MY K A ++ E ++V++ +I G+ ++ K E+ M +
Sbjct: 411 NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470
Query: 197 L--LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNP-FVGNTIMALYSKFNLIG 253
P+ F+ + L C+ LR G +H ++ + + P FV N ++ +Y+K I
Sbjct: 471 CQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSIS 530
Query: 254 EAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAAC 313
+A F + K+ ++W + + E+ L +F EM G + D T +L AC
Sbjct: 531 DARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRI-GFKLDGVTLLVVLYAC 589
Query: 314 AGLASVQHGKQIHAHLIRMRLNQDVGVGN----ALVNMYAKCGLISCSYKLFNEMLHRNV 369
+ + G + + RM+ V G LV++ + G ++
Sbjct: 590 SHSGMIDQGME---YFNRMKTVFGVSPGPEHYACLVDLLGRAGRLN-------------- 632
Query: 370 VSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNS 429
+AL+L E+M ++P V ++ L+ C G V+ GE +
Sbjct: 633 -----------------AALRLIEEMP---MEPPPVVWVAFLSCCRIHGKVELGEY---A 669
Query: 430 MEKTYGISPDIE-HFTCLIDLLGRAGK 455
EK ++ + + +T L +L AG+
Sbjct: 670 AEKITELASNHDGSYTLLSNLYANAGR 696
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 337 bits (865), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 201/613 (32%), Positives = 328/613 (53%), Gaps = 43/613 (7%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCG----------- 51
K+ LL + L G SLHA +K + +SNH +NLY+KCG
Sbjct: 9 KTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYS 68
Query: 52 --------------------KMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFF 91
K+ +AR++FDE+ + + VS++ +ISG+ A E A+ F
Sbjct: 69 TEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLF 128
Query: 92 SQMHLLPNE---YIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKV 148
+M L E + + I+AC L+K Q+H +S+ G+ S S V N+ ++ Y K
Sbjct: 129 KRMRKLGFEVDGFTLSGLIAACCDRVDLIK--QLHCFSVSGGFDSYSSVNNAFVTYYSKG 186
Query: 149 GYSSDALLV-YGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGG 207
G +A+ V YG + VS+N++I + ++++ K ++K M+ +G D F+ A
Sbjct: 187 GLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASV 246
Query: 208 LEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF---NLIGEAEKAFRLIEE 264
L + + L G H +K N VG+ ++ YSK + + ++EK F+ I
Sbjct: 247 LNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILS 306
Query: 265 KDLISWNTFIAACSHCADY-EKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGK 323
DL+ WNT I+ S + E+ + F++M G RPDD +F + +AC+ L+S K
Sbjct: 307 PDLVVWNTMISGYSMNEELSEEAVKSFRQMQRI-GHRPDDCSFVCVTSACSNLSSPSQCK 365
Query: 324 QIHAHLIRMRLNQD-VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH 382
QIH I+ + + + V NAL+++Y K G + + +F+ M N VS+N +I +A H
Sbjct: 366 QIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQH 425
Query: 383 RLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEH 442
G AL L+++M +GI P+ +TF+ +L+AC H G V EG+ YFN+M++T+ I P+ EH
Sbjct: 426 GHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEH 485
Query: 443 FTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQ 502
++C+IDLLGRAGKL EAE + P + LL ACR +++ + ER A +L +Q
Sbjct: 486 YSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQ 545
Query: 503 PTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSH 562
P +PYV+L+N+YA W ++A RK ++ ++K+P S IEV+ F ++SH
Sbjct: 546 PLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSH 605
Query: 563 SKIGEINYMLKTL 575
I E+N L+ +
Sbjct: 606 PMIREVNEYLEEM 618
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 336 bits (861), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 188/577 (32%), Positives = 313/577 (54%), Gaps = 12/577 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
S++ C+ + + G LHA V+K+ +I N ++ +Y + +M A +VF + +
Sbjct: 173 SIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMK 232
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLL----PNEYIFASAISACAGIQSLVKGQQI 122
+L+SWS++I+G Q G AL +M PNEYIF S++ AC+ + G QI
Sbjct: 233 DLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQI 292
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H +K A + G SL MY + G+ + A V+ + P+ S+N +IAG N
Sbjct: 293 HGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYA 352
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
++ VF M G +PD S L + L +GM +H +K ++ V N++
Sbjct: 353 DEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSL 412
Query: 243 MALYSKFNLIGEAEKAFRLIEE----KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
+ +Y+ + F L E+ D +SWNT + AC + L +FK M
Sbjct: 413 LTMYT---FCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSE- 468
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
PD T ++L C ++S++ G Q+H + ++ L + + N L++MYAKCG + +
Sbjct: 469 CEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQAR 528
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
++F+ M +R+VVSW+T+I +A G AL LF++MK+ GI+P+ VTF+G+LTAC+H G
Sbjct: 529 RIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVG 588
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTL 478
LV+EG + +M+ +GISP EH +C++DLL RAG+L EAE + + L D +V TL
Sbjct: 589 LVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTL 648
Query: 479 LSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLK 538
LSAC+ + +V + ++ A+ + + P ++ +VLL +++AS G W + A R +K +K
Sbjct: 649 LSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVK 708
Query: 539 KEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
K P S IE++ F + H + +I +L +
Sbjct: 709 KIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNI 745
Score = 236 bits (602), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 147/460 (31%), Positives = 243/460 (52%), Gaps = 7/460 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
SL+ CS +++L QG +H +L + D I++NH+L++Y KCG + AR+VFD M ER
Sbjct: 72 SLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPER 131
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIH 123
NLVS++++I+G+ Q G+ A+ + +M L+P+++ F S I ACA + G+Q+H
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLH 191
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
A +K +S N+LI+MY++ SDA V+ +L+S++++IAGF +
Sbjct: 192 AQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEF 251
Query: 184 KGFEVFKLMLRQGLL-PDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
+ K ML G+ P+ + F L+ CS G +H L +K +L N G ++
Sbjct: 252 EALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSL 311
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+Y++ + A + F IE D SWN IA ++ ++ +SVF +M + G PD
Sbjct: 312 CDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSS-GFIPD 370
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+ S+L A ++ G QIH+++I+ D+ V N+L+ MY C + C + LF
Sbjct: 371 AISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFE 430
Query: 363 EMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ + + VSWNTI+ A H L+LF+ M + +PD +T LL C +K
Sbjct: 431 DFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLK 490
Query: 422 EGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEE 461
G KT G++P+ LID+ + G L +A
Sbjct: 491 LGSQVHCYSLKT-GLAPEQFIKNGLIDMYAKCGSLGQARR 529
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/394 (30%), Positives = 204/394 (51%), Gaps = 1/394 (0%)
Query: 103 FASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAF 162
+ S I AC+ +SL +G++IH + L + + N ++SMY K G DA V+
Sbjct: 70 YISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMP 129
Query: 163 EPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMI 222
E NLVS+ ++I G+ +N Q + ++ ML++ L+PD+F+F ++ C+ S+D+ G
Sbjct: 130 ERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQ 189
Query: 223 LHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCAD 282
LH +K + S+ N ++A+Y +FN + +A + F I KDLISW++ IA S
Sbjct: 190 LHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGF 249
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
+ LS KEM + P+++ F S L AC+ L +G QIH I+ L + G
Sbjct: 250 EFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGC 309
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
+L +MYA+CG ++ + ++F+++ + SWN IIA AN+ A+ +F QM+++G P
Sbjct: 310 SLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIP 369
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
D+++ LL A + +G + + K +G D+ L+ + L
Sbjct: 370 DAISLRSLLCAQTKPMALSQGMQIHSYIIK-WGFLADLTVCNSLLTMYTFCSDLYCCFNL 428
Query: 463 TKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAK 496
+ F D + T+L+AC V RL K
Sbjct: 429 FEDFRNNADSVSWNTILTACLQHEQPVEMLRLFK 462
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 143/285 (50%), Gaps = 12/285 (4%)
Query: 2 AKSISSLLHHCSKTK--ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKV 59
A S+ SLL C++TK AL QG+ +H+ ++K G D+ V N +L +Y C + +
Sbjct: 371 AISLRSLL--CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNL 428
Query: 60 FDEMSER-NLVSWSAMISG---HHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQS 115
F++ + VSW+ +++ H Q E L + P+ + + C I S
Sbjct: 429 FEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISS 488
Query: 116 LVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAG 175
L G Q+H YSLK G A F+ N LI MY K G A ++ ++VS++ LI G
Sbjct: 489 LKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVG 548
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+ ++ E+ +FK M G+ P+ +F G L CS + +G+ L+ T++ + +
Sbjct: 549 YAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYA-TMQTEHGIS 607
Query: 236 PFVG--NTIMALYSKFNLIGEAEKAFRLIE-EKDLISWNTFIAAC 277
P + ++ L ++ + EAE+ ++ E D++ W T ++AC
Sbjct: 608 PTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSAC 652
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
Y + L F + + T+ S++ AC+ S+ G++IH H++ D + N
Sbjct: 47 YREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNN 106
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
+++MY KCG + + ++F+ M RN+VS+ ++I ++ + G A++L+ +M + P
Sbjct: 107 HILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVP 166
Query: 403 DSVTFIGLLTAC---NHAGLVKEGEAYFNSMEKT 433
D F ++ AC + GL K+ A +E +
Sbjct: 167 DQFAFGSIIKACASSSDVGLGKQLHAQVIKLESS 200
>sp|Q9FXA9|PPR83_ARATH Putative pentatricopeptide repeat-containing protein At1g56570
OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1
Length = 611
Score = 336 bits (861), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 180/529 (34%), Positives = 308/529 (58%), Gaps = 9/529 (1%)
Query: 37 VIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM-- 94
++ +N +++ + K G + AR +FDEM +R++V+W+AMI+G+ + + A E F +M
Sbjct: 46 ILATNLIVSYFEK-GLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVK 104
Query: 95 -HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSD 153
PNE+ +S + +C ++ L G +H +K G +V N++++MY + +
Sbjct: 105 QGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTME 164
Query: 154 A-LLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
A L++ + N V++ LI GF G +++K ML + + + +
Sbjct: 165 AACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASA 224
Query: 213 VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNT 272
+ + G +H +K +SN V N+I+ LY + + EA+ F +E+KDLI+WNT
Sbjct: 225 SIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNT 284
Query: 273 FIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
I+ +D + L +F+ + G P+ +TF S++AACA +A++ G+Q+H + R
Sbjct: 285 LISELER-SDSSEALLMFQRFES-QGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRR 342
Query: 333 RLNQDVGVGNALVNMYAKCGLISCSYKLFNEML-HRNVVSWNTIIAAHANHRLGGSALKL 391
N++V + NAL++MYAKCG I S ++F E++ RN+VSW +++ + +H G A++L
Sbjct: 343 GFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVEL 402
Query: 392 FEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLG 451
F++M ++GI+PD + F+ +L+AC HAGLV++G YFN ME YGI+PD + + C++DLLG
Sbjct: 403 FDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLG 462
Query: 452 RAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERL-AKQLFHLQPTTTSPYV 510
RAGK+ EA E ++ P D G +L AC+ + + RL A+++ L+P YV
Sbjct: 463 RAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYV 522
Query: 511 LLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAE 559
+LS +YA++G W D A RKM++ G KKE S I V+ F V++
Sbjct: 523 MLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSD 571
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 210/415 (50%), Gaps = 11/415 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCG-KMILARKVFDE 62
++SS+L C K L G +H V+K+G++ + V N ++N+YA C M A +F +
Sbjct: 113 TLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRD 172
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNE---YIFASAISACAGIQSLVKG 119
+ +N V+W+ +I+G G+ + L+ + QM L E Y A+ A A I S+ G
Sbjct: 173 IKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTG 232
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+QIHA +K G+ S V NS++ +Y + GY S+A + E + +L+++N LI+ +E
Sbjct: 233 KQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISE-LER 291
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ +F+ QG +P+ ++F + C+ L G LH + N +
Sbjct: 292 SDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELA 351
Query: 240 NTIMALYSKFNLIGEAEKAF-RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
N ++ +Y+K I ++++ F +++ ++L+SW + + + + +F +M + G
Sbjct: 352 NALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSS-G 410
Query: 299 VRPDDFTFASILAACAGLASVQHG-KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
+RPD F ++L+AC V+ G K + +N D + N +V++ + G I +
Sbjct: 411 IRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEA 470
Query: 358 YKLFNEMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSV-TFIGL 410
Y+L M + + +W I+ A H+ G +L + K +KP V T++ L
Sbjct: 471 YELVERMPFKPDESTWGAILGACKAHKHNGLISRLAAR-KVMELKPKMVGTYVML 524
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 190/574 (33%), Positives = 325/574 (56%), Gaps = 15/574 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMG-IQPDVIVSNHVLNLYAKCGKMIL-ARKVFDEM 63
++++ CS + + G ++K G + DV V +++++ K A KVFD+M
Sbjct: 170 TAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKM 229
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQ 120
SE N+V+W+ MI+ Q G A+ FF M L +++ +S SACA +++L G+
Sbjct: 230 SELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGK 289
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKV---GYSSDALLVYGEAFEPNLVSFNALIAGFV 177
Q+H+++++ G + V SL+ MY K G D V+ + +++S+ ALI G++
Sbjct: 290 QLHSWAIRSGL--VDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYM 347
Query: 178 EN-QQPEKGFEVFKLMLRQG-LLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+N + +F M+ QG + P+ F+F+ + C +D R G + K L SN
Sbjct: 348 KNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASN 407
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
V N++++++ K + + +A++AF + EK+L+S+NTF+ ++E+ + E++
Sbjct: 408 SSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE 467
Query: 296 DH-GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLI 354
GV FTFAS+L+ A + S++ G+QIH+ ++++ L+ + V NAL++MY+KCG I
Sbjct: 468 RELGVSA--FTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSI 525
Query: 355 SCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+ ++FN M +RNV+SW ++I A H L+ F QM G+KP+ VT++ +L+AC
Sbjct: 526 DTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSAC 585
Query: 415 NHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
+H GLV EG +FNSM + + I P +EH+ C++DLL RAG L +A E+ P D +V
Sbjct: 586 SHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLV 645
Query: 475 LGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKD 534
T L ACR+ + +G+ A+++ L P + Y+ LSN+YA G W + R+ +K+
Sbjct: 646 WRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKE 705
Query: 535 SGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
L KE S IEV KF V + +H +I
Sbjct: 706 RNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQI 739
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 231/465 (49%), Gaps = 15/465 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SSLL C + + + G +HA +++ I+PD ++ N +++LY+K G A VF+ M
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 64 S---ERNLVSWSAMISGHHQAGEHLLALEFFS---QMHLLPNEYIFASAISACAGIQSLV 117
+R++VSWSAM++ + G L A++ F ++ L+PN+Y + + I AC+ +
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 118 KGQQIHAYSLKFG-YASISFVGNSLISMYMKVGYS-SDALLVYGEAFEPNLVSFNALIAG 175
G+ + +K G + S VG SLI M++K S +A V+ + E N+V++ +I
Sbjct: 184 VGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITR 243
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
++ P + F M+ G D+F+ + C+ +L G LH ++ L +
Sbjct: 244 CMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD 303
Query: 236 PFVGNTIMALYSKFNLIG---EAEKAFRLIEEKDLISWNTFIAA-CSHCADYEKGLSVFK 291
V +++ +Y+K + G + K F +E+ ++SW I +C + +++F
Sbjct: 304 --VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFS 361
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
EM V P+ FTF+S AC L+ + GKQ+ + L + V N++++M+ K
Sbjct: 362 EMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKS 421
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
+ + + F + +N+VS+NT + + A KL ++ + + TF LL
Sbjct: 422 DRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLL 481
Query: 412 TACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+ + G +++GE + + K G+S + LI + + G +
Sbjct: 482 SGVANVGSIRKGEQIHSQVVK-LGLSCNQPVCNALISMYSKCGSI 525
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 138/291 (47%), Gaps = 10/291 (3%)
Query: 191 LMLRQGLLP-DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKF 249
LM R G+ P D +F+ L+ C + D R G ++H ++ +E + + N++++LYSK
Sbjct: 51 LMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKS 110
Query: 250 NLIGEAEKAF---RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
+AE F R ++D++SW+ +A + + VF E + G+ P+D+ +
Sbjct: 111 GDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFL-ELGLVPNDYCY 169
Query: 307 ASILAACAGLASVQHGKQIHAHLIRM-RLNQDVGVGNALVNMYAKC-GLISCSYKLFNEM 364
+++ AC+ V G+ L++ DV VG +L++M+ K +YK+F++M
Sbjct: 170 TAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKM 229
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
NVV+W +I A++ F M +G + D T + +AC + G+
Sbjct: 230 SELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGK 289
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
+S G+ D+E L+D+ + ++ K F +D V+
Sbjct: 290 Q-LHSWAIRSGLVDDVE--CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVM 337
Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 77/123 (62%), Gaps = 3/123 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + +SLL + ++++G +H+ V+K+G+ + V N ++++Y+KCG + A +VF+
Sbjct: 474 AFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFN 533
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
M RN++SW++MI+G + G + LE F+QM + PNE + + +SAC+ + + +
Sbjct: 534 FMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSE 593
Query: 119 GQQ 121
G +
Sbjct: 594 GWR 596
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 5/181 (2%)
Query: 282 DYEKGLSVFKEMSNDHGVRP-DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGV 340
D +S M+ D G+RP D TF+S+L +C + GK +HA LI + D +
Sbjct: 41 DLRGAVSALDLMARD-GIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVL 99
Query: 341 GNALVNMYAKCGLISCSYKLFNEMLH---RNVVSWNTIIAAHANHRLGGSALKLFEQMKA 397
N+L+++Y+K G + + +F M R+VVSW+ ++A + N+ A+K+F +
Sbjct: 100 YNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE 159
Query: 398 TGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLL 457
G+ P+ + ++ AC+++ V G + KT D+ LID+ +
Sbjct: 160 LGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSF 219
Query: 458 E 458
E
Sbjct: 220 E 220
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 333 bits (853), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 212/621 (34%), Positives = 327/621 (52%), Gaps = 65/621 (10%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLN-------LYAKCGKMILARKV 59
SLLH+C K LQ +HA ++K+G+ +N+ L+ L + A V
Sbjct: 38 SLLHNC---KTLQSLRIIHAQMIKIGLHN----TNYALSKLIEFCILSPHFEGLPYAISV 90
Query: 60 FDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSL 116
F + E NL+ W+ M GH + + + AL+ + M LLPN Y F + +CA ++
Sbjct: 91 FKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAF 150
Query: 117 VKGQQIHAYSLKFGYASISFVGNSLISMYMK----------------------------- 147
+GQQIH + LK G +V SLISMY++
Sbjct: 151 KEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGY 210
Query: 148 --VGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA 205
GY +A ++ E ++VS+NA+I+G+ E ++ E+FK M++ + PD +
Sbjct: 211 ASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMV 270
Query: 206 GGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE- 264
+ C+ S + G +H SN + N ++ LYSK GE E A L E
Sbjct: 271 TVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSK---CGELETACGLFERL 327
Query: 265 --KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHG 322
KD+ISWNT I +H Y++ L +F+EM G P+D T SIL ACA L ++ G
Sbjct: 328 PYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS-GETPNDVTMLSILPACAHLGAIDIG 386
Query: 323 KQIHAHLIRMRLNQDVGVGNA------LVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
+ IH + I RL GV NA L++MYAKCG I ++++FN +LH+++ SWN +I
Sbjct: 387 RWIHVY-IDKRLK---GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 442
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
A H ++ LF +M+ GI+PD +TF+GLL+AC+H+G++ G F +M + Y +
Sbjct: 443 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKM 502
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAK 496
+P +EH+ C+IDLLG +G EAEE + D ++ +LL AC++ +V +GE A+
Sbjct: 503 TPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAE 562
Query: 497 QLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFT 556
L ++P YVLLSN+YAS G W +VA R +L D G+KK P S IE+ +F
Sbjct: 563 NLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFI 622
Query: 557 VAEFSHSKIGEINYMLKTLSL 577
+ + H + EI ML+ + +
Sbjct: 623 IGDKFHPRNREIYGMLEEMEV 643
>sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610
OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1
Length = 654
Score = 333 bits (853), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 194/548 (35%), Positives = 299/548 (54%), Gaps = 9/548 (1%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L C+ +A+ G +H+ V D+ V +++ YAKCG++ +A KVFDEM +R+
Sbjct: 109 VLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRD 168
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQQIH 123
+V+W+AMISG + F M L PN A +L +G+ +H
Sbjct: 169 MVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVH 228
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
Y + G+++ V ++ +Y K A V+ F+ N V+++A+I G+VEN+ +
Sbjct: 229 GYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIK 288
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEI--CSVSNDLRKGMILHCLTVKCKLESNPFVGNT 241
+ EVF ML + A GL + C+ DL G +HC VK + V NT
Sbjct: 289 EAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNT 348
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
I++ Y+K+ + +A + F I KD+IS+N+ I C E+ +F EM G+RP
Sbjct: 349 IISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTS-GIRP 407
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
D T +L AC+ LA++ HG H + + + + NAL++MY KCG + + ++F
Sbjct: 408 DITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVF 467
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVK 421
+ M R++VSWNT++ H LG AL LF M+ TG+ PD VT + +L+AC+H+GLV
Sbjct: 468 DTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVD 527
Query: 422 EGEAYFNSMEK-TYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLS 480
EG+ FNSM + + + P I+H+ C+ DLL RAG L EA ++ K P D VLGTLLS
Sbjct: 528 EGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLS 587
Query: 481 ACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKE 540
AC ++ +G ++K++ L TT S VLLSN Y++ W D A R + K GL K
Sbjct: 588 ACWTYKNAELGNEVSKKMQSLGETTES-LVLLSNTYSAAERWEDAARIRMIQKKRGLLKT 646
Query: 541 PSYSMIEV 548
P YS ++V
Sbjct: 647 PGYSWVDV 654
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 227/459 (49%), Gaps = 11/459 (2%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLK--MGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
SLL C +++ L G +H +LK + + ++ N + LYA C ++ LAR VFDE+
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDEIP 62
Query: 65 ER--NLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKG 119
N ++W MI + AL+ + +M + P +Y + + ACAG++++ G
Sbjct: 63 HPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDG 122
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ IH++ +A+ +V +L+ Y K G A+ V+ E + ++V++NA+I+GF +
Sbjct: 123 KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLH 182
Query: 180 QQPEKGFEVFKLMLR-QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+F M R GL P+ + G + LR+G +H + ++ V
Sbjct: 183 CCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVV 242
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAA-CSHCADYEKGLSVFKEMSNDH 297
I+ +Y+K I A + F L +K+ ++W+ I + E G F+ + ND+
Sbjct: 243 KTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDN 302
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
IL CA + G+ +H + ++ D+ V N +++ YAK G + +
Sbjct: 303 VAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDA 362
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
++ F+E+ ++V+S+N++I + + +LF +M+ +GI+PD T +G+LTAC+H
Sbjct: 363 FRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHL 422
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL 456
+ G + + +G + + L+D+ + GKL
Sbjct: 423 AALGHGSS-CHGYCVVHGYAVNTSICNALMDMYTKCGKL 460
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 174/389 (44%), Gaps = 13/389 (3%)
Query: 102 IFASAISACAGIQSLVKGQQIHAYSLKFGYA-SISFVGNSLISMYMKVGYSSDALLVYGE 160
+F S + C ++LV GQ IH + LK S S V +L +Y A V+ E
Sbjct: 1 MFLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDE 60
Query: 161 AFEP--NLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLR 218
P N ++++ +I + N EK +++ ML G+ P ++++ L+ C+ +
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
G ++H ++ +V ++ Y+K + A K F + ++D+++WN I+ S
Sbjct: 121 DGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS 180
Query: 279 -HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQD 337
HC + +F +M G+ P+ T + A +++ GK +H + RM + D
Sbjct: 181 LHCC-LTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSND 239
Query: 338 VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-- 395
+ V ++++YAK I + ++F+ +N V+W+ +I + + + A ++F QM
Sbjct: 240 LVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLV 299
Query: 396 --KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 453
+ P ++ I L C G + G K G D+ +I +
Sbjct: 300 NDNVAMVTPVAIGLI--LMGCARFGDLSGGRCVHCYAVKA-GFILDLTVQNTIISFYAKY 356
Query: 454 GKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G L +A + L +D I +L++ C
Sbjct: 357 GSLCDAFRQFSEIGL-KDVISYNSLITGC 384
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 138/298 (46%), Gaps = 6/298 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I +L C++ L G +H +K G D+ V N +++ YAK G + A + F E+
Sbjct: 310 AIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEI 369
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
++++S++++I+G + F +M + P+ ++AC+ + +L G
Sbjct: 370 GLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGS 429
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
H Y + GYA + + N+L+ MY K G A V+ + ++VS+N ++ GF +
Sbjct: 430 SCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHG 489
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG- 239
++ +F M G+ PD + L CS S + +G L + P +
Sbjct: 490 LGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDH 549
Query: 240 -NTIMALYSKFNLIGEA-EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
N + L ++ + EA + ++ E D+ T ++AC + E G V K+M +
Sbjct: 550 YNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQS 607
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 333 bits (853), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 191/565 (33%), Positives = 315/565 (55%), Gaps = 10/565 (1%)
Query: 17 ALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMIS 76
+L++G +HA V+K+G DV V N +++LY K G A KVF+EM ER++VSW++MIS
Sbjct: 145 SLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMIS 204
Query: 77 GHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYAS 133
G+ G+ +L F +M P+ + SA+ AC+ + S G++IH ++++ +
Sbjct: 205 GYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIET 264
Query: 134 IS-FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM 192
V S++ MY K G S A ++ + N+V++N +I + N + F F+ M
Sbjct: 265 GDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKM 324
Query: 193 LRQ-GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
Q GL PD + L ++ + +G +H ++ + + ++ +Y +
Sbjct: 325 SEQNGLQPDVITSINLLP----ASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQ 380
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
+ AE F + EK++ISWN+ IAA L +F+E+ D + PD T ASIL
Sbjct: 381 LKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELW-DSSLVPDSTTIASILP 439
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
A A S+ G++IHA++++ R + + N+LV+MYA CG + + K FN +L ++VVS
Sbjct: 440 AYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVS 499
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
WN+II A+A H G ++ LF +M A+ + P+ TF LL AC+ +G+V EG YF SM+
Sbjct: 500 WNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMK 559
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
+ YGI P IEH+ C++DL+GR G A+ + ++ P + G+LL+A R +D+ I
Sbjct: 560 REYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIA 619
Query: 492 ERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGT 551
E A+Q+F ++ T YVLL N+YA G W DV + +++ G+ + S S +E +G
Sbjct: 620 EFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGK 679
Query: 552 FEKFTVAEFSHSKIGEINYMLKTLS 576
FT + SH +I +L +S
Sbjct: 680 SHVFTNGDRSHVATNKIYEVLDVVS 704
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 212/373 (56%), Gaps = 8/373 (2%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAG 112
A ++FDEM++ + W+ MI G G ++ A++F+S+M + + + + I + AG
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 113 IQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNAL 172
I SL +G++IHA +K G+ S +V NSLIS+YMK+G + DA V+ E E ++VS+N++
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 173 IAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL 232
I+G++ +FK ML+ G PDRFS L CS + G +HC V+ ++
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 233 ES-NPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFK 291
E+ + V +I+ +YSK+ + AE+ F + ++++++WN I + F+
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQ 322
Query: 292 EMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKC 351
+MS +G++PD T ++L A A + G+ IH + +R + + AL++MY +C
Sbjct: 323 KMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMYGEC 378
Query: 352 GLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLL 411
G + + +F+ M +NV+SWN+IIAA+ + SAL+LF+++ + + PDS T +L
Sbjct: 379 GQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASIL 438
Query: 412 TACNHAGLVKEGE 424
A + + EG
Sbjct: 439 PAYAESLSLSEGR 451
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 165/310 (53%), Gaps = 8/310 (2%)
Query: 153 DALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
DAL ++ E + + +N +I GF + + + M+ G+ D F++ ++ +
Sbjct: 82 DALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVA 141
Query: 213 VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNT 272
+ L +G +H + +K S+ +V N++++LY K +AEK F + E+D++SWN+
Sbjct: 142 GISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNS 201
Query: 273 FIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRM 332
I+ D L +FKEM G +PD F+ S L AC+ + S + GK+IH H +R
Sbjct: 202 MISGYLALGDGFSSLMLFKEMLK-CGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRS 260
Query: 333 RLNQ-DVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKL 391
R+ DV V ++++MY+K G +S + ++FN M+ RN+V+WN +I +A + A
Sbjct: 261 RIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLC 320
Query: 392 FEQM-KATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLL 450
F++M + G++PD +T I LL A + EG + G P + T LID+
Sbjct: 321 FQKMSEQNGLQPDVITSINLLP----ASAILEGRT-IHGYAMRRGFLPHMVLETALIDMY 375
Query: 451 GRAGKLLEAE 460
G G+L AE
Sbjct: 376 GECGQLKSAE 385
Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 134/271 (49%), Gaps = 7/271 (2%)
Query: 246 YSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFT 305
++ L+ +A + F + + D WN I + C Y + + + M GV+ D FT
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVF-AGVKADTFT 132
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
+ ++ + AG++S++ GK+IHA +I++ DV V N+L+++Y K G + K+F EM
Sbjct: 133 YPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP 192
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
R++VSWN++I+ + G S+L LF++M G KPD + + L AC+H K G+
Sbjct: 193 ERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKE 252
Query: 426 YFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLR 485
++ + D+ T ++D+ + G++ AE + Q IV ++ C R
Sbjct: 253 IHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFN--GMIQRNIVAWNVMIGCYAR 310
Query: 486 RDVVIGERLAKQLFH----LQPTTTSPYVLL 512
V L Q LQP + LL
Sbjct: 311 NGRVTDAFLCFQKMSEQNGLQPDVITSINLL 341
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
+ +I+S+L +++ +L +G +HA ++K + I+ N ++++YA CG + ARK F+
Sbjct: 431 STTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFN 490
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACA 111
+ +++VSW+++I + G +++ FS+M + PN+ FAS ++AC+
Sbjct: 491 HILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACS 543
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 331 bits (849), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 184/559 (32%), Positives = 312/559 (55%), Gaps = 4/559 (0%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
LH+ ++K+G + V ++N Y+ CG + AR VF+ + +++V W+ ++S + + G
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 84 HLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
+L+ S M + +PN Y F +A+ A G+ + + +H LK Y VG
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG 287
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPD 200
L+ +Y ++G SDA V+ E + ++V ++ +IA F +N + ++F M ++P+
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 201 RFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFR 260
F+ + L C++ G LH L VK + + +V N ++ +Y+K + A K F
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFA 407
Query: 261 LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQ 320
+ K+ +SWNT I + + K S+F+E + V + TF+S L ACA LAS+
Sbjct: 408 ELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQ-VSVTEVTFSSALGACASLASMD 466
Query: 321 HGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHA 380
G Q+H I+ + V V N+L++MYAKCG I + +FNEM +V SWN +I+ ++
Sbjct: 467 LGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYS 526
Query: 381 NHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDI 440
H LG AL++ + MK KP+ +TF+G+L+ C++AGL+ +G+ F SM + +GI P +
Sbjct: 527 THGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCL 586
Query: 441 EHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFH 500
EH+TC++ LLGR+G+L +A + + P ++ +LSA + + R A+++
Sbjct: 587 EHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILK 646
Query: 501 LQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEF 560
+ P + YVL+SN+YA W +VA RK +K+ G+KKEP S IE QG F+V
Sbjct: 647 INPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLS 706
Query: 561 SHSKIGEINYMLKTLSLAA 579
H + IN ML+ L++ A
Sbjct: 707 DHPDMKLINGMLEWLNMKA 725
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 198/410 (48%), Gaps = 6/410 (1%)
Query: 7 SLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
++L C + ++H +LK G D+ +N +LN Y K G A +FDEM ER
Sbjct: 54 AMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPER 113
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYS 126
N VS+ + G+ L + H L N ++F S + + +H+
Sbjct: 114 NNVSFVTLAQGYACQDPIGLYSRLHREGHEL-NPHVFTSFLKLFVSLDKAEICPWLHSPI 172
Query: 127 LKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
+K GY S +FVG +LI+ Y G A V+ ++V + +++ +VEN E
Sbjct: 173 VKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSL 232
Query: 187 EVFKLMLRQGLLPDRFSFAGGLE--ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMA 244
++ M G +P+ ++F L+ I + D KG +H +K +P VG ++
Sbjct: 233 KLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKG--VHGQILKTCYVLDPRVGVGLLQ 290
Query: 245 LYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDF 304
LY++ + +A K F + + D++ W+ IA + + +F M + V P++F
Sbjct: 291 LYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM-REAFVVPNEF 349
Query: 305 TFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM 364
T +SIL CA G+Q+H ++++ + D+ V NAL+++YAKC + + KLF E+
Sbjct: 350 TLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAEL 409
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTAC 414
+N VSWNT+I + N GG A +F + + VTF L AC
Sbjct: 410 SSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGAC 459
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 137/280 (48%), Gaps = 9/280 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+L+ C+ K G LH V+K+G D+ VSN ++++YAKC KM A K+F E+
Sbjct: 350 TLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAEL 409
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
S +N VSW+ +I G+ GE A F + + E F+SA+ ACA + S+ G
Sbjct: 410 SSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGV 469
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H ++K A V NSLI MY K G A V+ E ++ S+NALI+G+ +
Sbjct: 470 QVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHG 529
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ + +M + P+ +F G L CS + + +G C +
Sbjct: 530 LGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQ--ECFESMIRDHGIEPCLE 587
Query: 241 TIMALYSKFNLIGEAEKAFRLIE----EKDLISWNTFIAA 276
+ G+ +KA +LIE E ++ W ++A
Sbjct: 588 HYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627
Score = 122 bits (306), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 173/396 (43%), Gaps = 12/396 (3%)
Query: 87 ALEFFSQMHLLP--NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISM 144
AL+ S ++P + + + + + C + + IH LK G F N L++
Sbjct: 34 ALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNA 93
Query: 145 YMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSF 204
Y+K G+ DAL ++ E E N VSF L G+ Q P ++ + R+G + F
Sbjct: 94 YVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA-CQDP---IGLYSRLHREGHELNPHVF 149
Query: 205 AGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE 264
L++ + LH VK +SN FVG ++ YS + A F I
Sbjct: 150 TSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILC 209
Query: 265 KDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQ 324
KD++ W ++ +E L + M G P+++TF + L A GL + K
Sbjct: 210 KDIVVWAGIVSCYVENGYFEDSLKLLSCMRM-AGFMPNNYTFDTALKASIGLGAFDFAKG 268
Query: 325 IHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRL 384
+H +++ D VG L+ +Y + G +S ++K+FNEM +VV W+ +IA +
Sbjct: 269 VHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGF 328
Query: 385 GGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFT 444
A+ LF +M+ + P+ T +L C GE + K G DI
Sbjct: 329 CNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKV-GFDLDIYVSN 387
Query: 445 CLIDLLGRAGKLLEA----EEYTKKFPLGQDPIVLG 476
LID+ + K+ A E + K + + +++G
Sbjct: 388 ALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVG 423
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 328 bits (841), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 183/584 (31%), Positives = 319/584 (54%), Gaps = 15/584 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ ++L C++ + + G +H +K+ + +++++N ++++Y+KCG + A+ +F
Sbjct: 294 TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN 353
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM-----HLLPNEYIFASAISACAGIQSLVK 118
+ +N+VSW+ M+ G G+ + QM + +E +A+ C L
Sbjct: 354 NNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPS 413
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+++H YSLK + V N+ ++ Y K G S A V+ + S+NALI G +
Sbjct: 414 LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 473
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
+ P + M GLLPD F+ L CS LR G +H ++ LE + FV
Sbjct: 474 SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 533
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG 298
++++LY + + F +E+K L+SWNT I ++ L VF++M +G
Sbjct: 534 YLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVL-YG 592
Query: 299 VRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSY 358
++ + + AC+ L S++ G++ HA+ ++ L D + +L++MYAK G I+ S
Sbjct: 593 IQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSS 652
Query: 359 KLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAG 418
K+FN + ++ SWN +I + H L A+KLFE+M+ TG PD +TF+G+LTACNH+G
Sbjct: 653 KVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSG 712
Query: 419 LVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKL-----LEAEEYTKKFPLGQDPI 473
L+ EG Y + M+ ++G+ P+++H+ C+ID+LGRAG+L + AEE +++ +G
Sbjct: 713 LIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVG---- 768
Query: 474 VLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLK 533
+ +LLS+CR+ +++ +GE++A +LF L+P YVLLSNLYA G W DV R+ +
Sbjct: 769 IWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMN 828
Query: 534 DSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
+ L+K+ S IE+ F V E EI + L +
Sbjct: 829 EMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEM 872
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 124/418 (29%), Positives = 211/418 (50%), Gaps = 10/418 (2%)
Query: 8 LLHHCSKTKALQQGISLHAAVL-KMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSER 66
LL K K ++ G +H V ++ D ++ ++ +YA CG +R VFD + +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 67 NLVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQI 122
NL W+A+IS + + + LE F +M LLP+ + + I ACAG+ + G +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H +K G FVGN+L+S Y G+ +DAL ++ E NLVS+N++I F +N
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 183 EKGFEVFKLMLRQ----GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
E+ F + M+ + +PD + L +C+ ++ G +H VK +L+ +
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 239 GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEM-SNDH 297
N +M +YSK I A+ F++ K+++SWNT + S D V ++M +
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 389
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
V+ D+ T + + C + + K++H + ++ + V NA V YAKCG +S +
Sbjct: 390 DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYA 449
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
++F+ + + V SWN +I HA +L QMK +G+ PDS T LL+AC+
Sbjct: 450 QRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 149/282 (52%), Gaps = 6/282 (2%)
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ-GLLP 199
+I+MY G D+ V+ NL +NA+I+ + N+ ++ E F M+ LLP
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
D F++ ++ C+ +D+ G+ +H L VK L + FVGN +++ Y + +A + F
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHG---VRPDDFTFASILAACAGL 316
++ E++L+SWN+ I S E+ + EM ++G PD T ++L CA
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 317 ASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
+ GK +H +++RL++++ + NAL++MY+KCG I+ + +F ++NVVSWNT++
Sbjct: 306 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 365
Query: 377 AAHANHRLGGSALKLFEQMKATG--IKPDSVTFIGLLTACNH 416
+ + QM A G +K D VT + + C H
Sbjct: 366 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
>sp|Q9C9H9|PP114_ARATH Pentatricopeptide repeat-containing protein At1g71420
OS=Arabidopsis thaliana GN=PCMP-H70 PE=2 SV=1
Length = 745
Score = 325 bits (833), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 196/574 (34%), Positives = 323/574 (56%), Gaps = 35/574 (6%)
Query: 3 KSISSLLHHCSKTKALQQGISLHAAVLK--MGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
++ ++L C++ + L GI+LH +L +VI++N ++N+YAKCG ++ AR+VF
Sbjct: 60 QAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVF 119
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM--HLLPNEYIFASAISACAGIQSLVK 118
D M ERN+VSW+A+I+G+ QAG FS M H PNE+ +S +++C
Sbjct: 120 DTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNEFTLSSVLTSC----RYEP 175
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKV---GYSSDALLVYGEAFEPNLVSFNALIAG 175
G+Q+H +LK G +V N++ISMY + + +A V+ NLV++N++IA
Sbjct: 176 GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAA 235
Query: 176 FVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS--------VSNDLRKGMI-LHCL 226
F +K VF M G+ DR A L ICS V N++ K + LH L
Sbjct: 236 FQCCNLGKKAIGVFMRMHSDGVGFDR---ATLLNICSSLYKSSDLVPNEVSKCCLQLHSL 292
Query: 227 TVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE----KDLISWNTFIAACSHCAD 282
TVK L + V ++ +YS+ ++ + ++L E +D+++WN I A + D
Sbjct: 293 TVKSGLVTQTEVATALIKVYSE--MLEDYTDCYKLFMEMSHCRDIVAWNGIITAFA-VYD 349
Query: 283 YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGN 342
E+ + +F ++ + + PD +TF+S+L ACAGL + +H IHA +I+ D + N
Sbjct: 350 PERAIHLFGQLRQEK-LSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNN 408
Query: 343 ALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKP 402
+L++ YAKCG + ++F++M R+VVSWN+++ A++ H S L +F++M I P
Sbjct: 409 SLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD---INP 465
Query: 403 DSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEY 462
DS TFI LL+AC+HAG V+EG F SM + P + H+ C+ID+L RA + EAEE
Sbjct: 466 DSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEV 525
Query: 463 TKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHL-QPTTTSPYVLLSNLYASDGM 521
K+ P+ D +V LL +CR + +G+ A +L L +PT + Y+ +SN+Y ++G
Sbjct: 526 IKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGS 585
Query: 522 WGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKF 555
+ + + K ++ ++KEP S E+ +F
Sbjct: 586 FNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEF 619
>sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protein At5g39680
OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1
Length = 710
Score = 322 bits (826), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 178/568 (31%), Positives = 310/568 (54%), Gaps = 8/568 (1%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVL---KMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
++ LL C+ + L+ G S+HA ++ + D N ++NLY KC + + ARK+FD
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL----LPNEYIFASAISACAGIQSLV 117
M ERN+VSW AM+ G+ +G L+ F M PNE++ +C+ +
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
+G+Q H LK+G S FV N+L+ MY + +A+ V + +L F++ ++G++
Sbjct: 154 EGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYL 213
Query: 178 ENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPF 237
E ++G +V + + + + ++ L + S DL + +H V+ +
Sbjct: 214 ECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVE 273
Query: 238 VGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDH 297
++ +Y K + A++ F +++ T + A +E+ L++F +M
Sbjct: 274 ACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKE 333
Query: 298 GVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCS 357
V P+++TFA +L + A L+ ++ G +H +++ V VGNALVNMYAK G I +
Sbjct: 334 -VPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDA 392
Query: 358 YKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHA 417
K F+ M R++V+WNT+I+ ++H LG AL+ F++M TG P+ +TFIG+L AC+H
Sbjct: 393 RKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHI 452
Query: 418 GLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGT 477
G V++G YFN + K + + PDI+H+TC++ LL +AG +AE++ + P+ D + T
Sbjct: 453 GFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRT 512
Query: 478 LLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGL 537
LL+AC +RR+ +G+++A+ P + YVLLSN++A W VA R ++ + G+
Sbjct: 513 LLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGV 572
Query: 538 KKEPSYSMIEVQGTFEKFTVAEFSHSKI 565
KKEP S I ++ F + H +I
Sbjct: 573 KKEPGVSWIGIRNQTHVFLAEDNQHPEI 600
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 321 bits (823), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 175/575 (30%), Positives = 316/575 (54%), Gaps = 6/575 (1%)
Query: 9 LHHCSKTKALQQGISLHAAVLK-MGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
L C + + + G +H V K + + D+ V + ++ +Y KCG+MI A ++FDE+ + +
Sbjct: 67 LKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPD 126
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQM----HLLPNEYIFASAISACAGIQSLVKGQQIH 123
+V+WS+M+SG + G A+EFF +M + P+ + +SAC + + G+ +H
Sbjct: 127 IVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVH 186
Query: 124 AYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+ ++ G+++ + NSL++ Y K +A+ ++ E +++S++ +IA +V+N
Sbjct: 187 GFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAA 246
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+ VF M+ G P+ + L+ C+ ++DL +G H L ++ LE+ V ++
Sbjct: 247 EALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALV 306
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y K EA F I KD++SW I+ + + + F M ++ RPD
Sbjct: 307 DMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDA 366
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
+L +C+ L ++ K H+++I+ + + +G +LV +Y++CG + + K+FN
Sbjct: 367 ILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNG 426
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTACNHAGLVKE 422
+ ++ V W ++I + H G AL+ F M K++ +KP+ VTF+ +L+AC+HAGL+ E
Sbjct: 427 IALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHE 486
Query: 423 GEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSAC 482
G F M Y ++P++EH+ L+DLLGR G L A E TK+ P P +LGTLL AC
Sbjct: 487 GLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGAC 546
Query: 483 RLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPS 542
R+ ++ + E +AK+LF L+ Y+L+SN+Y G W +V R +K G+KK +
Sbjct: 547 RIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLA 606
Query: 543 YSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLSL 577
S+IE++ +F + H + + +LK L L
Sbjct: 607 ESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDL 641
Score = 188 bits (478), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 222/432 (51%), Gaps = 9/432 (2%)
Query: 56 ARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAG 112
AR++F EM++R+L W+ ++ + + L FS M P+ + A+ AC
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 113 IQSLVKGQQIHAYSLK-FGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNA 171
++ + G+ IH + K S +VG+SLI MY+K G +AL ++ E +P++V++++
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 172 LIAGFVENQQPEKGFEVFKLM-LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC 230
+++GF +N P + E F+ M + + PDR + + C+ ++ R G +H ++
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 231 KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVF 290
++ + N+++ Y+K EA F++I EKD+ISW+T IA + L VF
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252
Query: 291 KEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
+M +D G P+ T +L ACA ++ G++ H IR L +V V ALV+MY K
Sbjct: 253 NDMMDD-GTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMK 311
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-KATGIKPDSVTFIG 409
C +Y +F+ + ++VVSW +I+ + + +++ F M +PD++ +
Sbjct: 312 CFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVK 371
Query: 410 LLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLG 469
+L +C+ G +++ + F+S YG + L++L R G L A + L
Sbjct: 372 VLGSCSELGFLEQAKC-FHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIAL- 429
Query: 470 QDPIVLGTLLSA 481
+D +V +L++
Sbjct: 430 KDTVVWTSLITG 441
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 203/461 (44%), Gaps = 35/461 (7%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++ +L+ C+K + G +H V++ G D+ + N +LN YAK A +F +
Sbjct: 165 TLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI 224
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
+E++++SWS +I+ + Q G AL F+ M PN + ACA L +G+
Sbjct: 225 AEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGR 284
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+ H +++ G + V +L+ MYMK +A V+ ++VS+ ALI+GF N
Sbjct: 285 KTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNG 344
Query: 181 QPEKGFEVFKLM-LRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ E F +M L PD L CS L + H +K +SNPF+G
Sbjct: 345 MAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIG 404
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+++ LYS+ +G A K F I KD + W + I K L F M V
Sbjct: 405 ASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEV 464
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIR-MRLNQDVGVGNALVNMYAKCGLISCSY 358
+P++ TF SIL+AC+ + G +I ++ RL ++ LV++ + G + +
Sbjct: 465 KPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAI 524
Query: 359 KLFNEMLHRNVVS-WNTIIAA---HANHRLGGS-ALKLFEQMKATGIKPDSVTFIGLLTA 413
++ M T++ A H N + + A KLFE
Sbjct: 525 EITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFE------------------LE 566
Query: 414 CNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
NHAG Y+ M YG+ + E+ L + + + G
Sbjct: 567 SNHAG-------YYMLMSNVYGVKGEWENVEKLRNSVKQRG 600
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 158/322 (49%), Gaps = 2/322 (0%)
Query: 147 KVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAG 206
K S DA ++GE + +L +N L+ +Q E+ F M R PD F+
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 207 GLEICSVSNDLRKGMILHCLTVK-CKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK 265
L+ C ++ G ++H K L S+ +VG++++ +Y K + EA + F +E+
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 266 DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
D+++W++ ++ + + F+ M V PD T ++++AC L++ + G+ +
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
H +IR + D+ + N+L+N YAK + LF + ++V+SW+T+IA + +
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAA 245
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
AL +F M G +P+ T + +L AC A +++G + + G+ +++ T
Sbjct: 246 AEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKT-HELAIRKGLETEVKVSTA 304
Query: 446 LIDLLGRAGKLLEAEEYTKKFP 467
L+D+ + EA + P
Sbjct: 305 LVDMYMKCFSPEEAYAVFSRIP 326
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 96/175 (54%), Gaps = 3/175 (1%)
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
M KF+ +A + F + ++ L WNT + + S +E+ L F M D +PD
Sbjct: 1 MGFCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEE-KPD 59
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIR-MRLNQDVGVGNALVNMYAKCGLISCSYKLF 361
+FT L AC L V +G+ IH + + + L D+ VG++L+ MY KCG + + ++F
Sbjct: 60 NFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMF 119
Query: 362 NEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQM-KATGIKPDSVTFIGLLTACN 415
+E+ ++V+W+++++ + A++ F +M A+ + PD VT I L++AC
Sbjct: 120 DELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 321 bits (822), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/470 (33%), Positives = 273/470 (58%), Gaps = 2/470 (0%)
Query: 99 NEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY 158
+ + + + C + L++G+ +HA+ L+ + +GN+L++MY K G +A V+
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 159 GEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLR 218
+ + + V++ LI+G+ ++ +P F MLR G P+ F+ + ++ +
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 219 KGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACS 278
G LH VKC +SN VG+ ++ LY+++ L+ +A+ F +E ++ +SWN IA +
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 279 HCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDV 338
+ EK L +F+ M D G RP F++AS+ AC+ ++ GK +HA++I+
Sbjct: 239 RRSGTEKALELFQGMLRD-GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA 297
Query: 339 GVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKAT 398
GN L++MYAK G I + K+F+ + R+VVSWN+++ A+A H G A+ FE+M+
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 399 GIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLE 458
GI+P+ ++F+ +LTAC+H+GL+ EG Y+ M+K GI P+ H+ ++DLLGRAG L
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNR 416
Query: 459 AEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYAS 518
A + ++ P+ + LL+ACR+ ++ +G A+ +F L P P+V+L N+YAS
Sbjct: 417 ALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYAS 476
Query: 519 DGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEI 568
G W D A RK +K+SG+KKEP+ S +E++ F + H + EI
Sbjct: 477 GGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEI 526
Score = 212 bits (540), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 209/390 (53%), Gaps = 8/390 (2%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
++LL C+ K L QG +HA +L+ + D+++ N +LN+YAKCG + ARKVF++M +
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACAGIQSLVKGQQI 122
R+ V+W+ +ISG+ Q AL FF+QM PNE+ +S I A A + G Q+
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H + +K G+ S VG++L+ +Y + G DA LV+ N VS+NALIAG
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTI 242
EK E+F+ MLR G P FS+A CS + L +G +H +K + F GNT+
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 303
Query: 243 MALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPD 302
+ +Y+K I +A K F + ++D++SWN+ + A + ++ + F+EM G+RP+
Sbjct: 304 LDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV-GIRPN 362
Query: 303 DFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFN 362
+ +F S+L AC+ + G + + + + + +V++ + G ++ + +
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIE 422
Query: 363 EM-LHRNVVSWNTIIAA---HANHRLGGSA 388
EM + W ++ A H N LG A
Sbjct: 423 EMPIEPTAAIWKALLNACRMHKNTELGAYA 452
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 97/186 (52%), Gaps = 4/186 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S +SL CS T L+QG +HA ++K G + N +L++YAK G + ARK+FD +
Sbjct: 264 SYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL 323
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
++R++VSW+++++ + Q G A+ +F +M + PNE F S ++AC+ L +G
Sbjct: 324 AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGW 383
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGE-AFEPNLVSFNALIAGFVEN 179
+ K G ++ +++ + + G + AL E EP + AL+ +
Sbjct: 384 HYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 443
Query: 180 QQPEKG 185
+ E G
Sbjct: 444 KNTELG 449
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 320 bits (821), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 189/580 (32%), Positives = 314/580 (54%), Gaps = 6/580 (1%)
Query: 1 MAKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVF 60
++ S + L CS+++ G +H V+KMG+ D V +L++Y+KCG + A VF
Sbjct: 271 VSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVF 330
Query: 61 DEMSERNLVSWSAMISGHHQAGEHLLALEFFS---QMHLLPNEYIFASAISACAGIQSLV 117
+ ++ L W+AM++ + + AL+ F Q +LP+ + ++ IS C+ +
Sbjct: 331 SCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYN 390
Query: 118 KGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFV 177
G+ +HA K S S + ++L+++Y K G DA LV+ E ++V++ +LI+G
Sbjct: 391 YGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLC 450
Query: 178 ENQQPEKGFEVFKLMLRQ--GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+N + ++ +VF M L PD C+ LR G+ +H +K L N
Sbjct: 451 KNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLN 510
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
FVG++++ LYSK L A K F + +++++WN+ I+ S E + +F M +
Sbjct: 511 VFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLS 570
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
G+ PD + S+L A + AS+ GK +H + +R+ + D + NAL++MY KCG
Sbjct: 571 -QGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSK 629
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ +F +M H+++++WN +I + +H +AL LF++MK G PD VTF+ L++ACN
Sbjct: 630 YAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACN 689
Query: 416 HAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVL 475
H+G V+EG+ F M++ YGI P++EH+ ++DLLGRAG L EA + K P+ D +
Sbjct: 690 HSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIW 749
Query: 476 GTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDS 535
LLSA R +V +G A++L ++P S YV L NLY G+ + A ++K+
Sbjct: 750 LCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEK 809
Query: 536 GLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTL 575
GL K+P S IEV F S EI +L L
Sbjct: 810 GLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRL 849
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/466 (29%), Positives = 233/466 (50%), Gaps = 17/466 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ SLL CS L G ++H +V+ +G + D ++ ++N+Y KCG + A +VFD
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 64 SE-------RNLVSWSAMISGHHQAGEHLLALEFFSQMHLL---PNEYIFASAISACA-- 111
S+ R++ W++MI G+ + + F +M + P+ + + +S
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 112 GIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFE-PNLVSFN 170
G +G+QIH + L+ + SF+ +LI MY K G S DA V+ E + N+V +N
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWN 241
Query: 171 ALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC 230
+I GF + E +++ L + SF G L CS S + G +HC VK
Sbjct: 242 VMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKM 301
Query: 231 KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVF 290
L ++P+V +++++YSK ++GEAE F + +K L WN +AA + L +F
Sbjct: 302 GLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLF 361
Query: 291 KEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK 350
M V PD FT +++++ C+ L +GK +HA L + + + +AL+ +Y+K
Sbjct: 362 GFM-RQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSK 420
Query: 351 CGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMK--ATGIKPDSVTFI 408
CG +Y +F M +++V+W ++I+ + ALK+F MK +KPDS
Sbjct: 421 CGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMT 480
Query: 409 GLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
+ AC ++ G SM KT G+ ++ + LIDL + G
Sbjct: 481 SVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSLIDLYSKCG 525
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 190/360 (52%), Gaps = 15/360 (4%)
Query: 80 QAGEHLLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS 135
Q GE+L AL +S+ + + F S + AC+ + +L G+ IH + G+
Sbjct: 36 QKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDP 95
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEP-------NLVSFNALIAGFVENQQPEKGFEV 188
F+ SL++MY+K G+ A+ V+ + ++ +N++I G+ + ++ ++G
Sbjct: 96 FIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGC 155
Query: 189 FKLMLRQGLLPDRFSFAGGLEICSVSNDLRK--GMILHCLTVKCKLESNPFVGNTIMALY 246
F+ ML G+ PD FS + + + + R+ G +H ++ L+++ F+ ++ +Y
Sbjct: 156 FRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMY 215
Query: 247 SKFNLIGEAEKAFRLIEEK-DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFT 305
KF L +A + F IE+K +++ WN I E L ++ ++ ++ V+ +
Sbjct: 216 FKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYM-LAKNNSVKLVSTS 274
Query: 306 FASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEML 365
F L AC+ + G+QIH +++M L+ D V +L++MY+KCG++ + +F+ ++
Sbjct: 275 FTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVV 334
Query: 366 HRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEA 425
+ + WN ++AA+A + G SAL LF M+ + PDS T +++ C+ GL G++
Sbjct: 335 DKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKS 394
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 269 SWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAH 328
S N+ I A +Y + L ++ + FTF S+L AC+ L ++ +GK IH
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 329 LIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLH-------RNVVSWNTIIAAHAN 381
++ + D + +LVNMY KCG + + ++F+ R+V WN++I +
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 382 HRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI----S 437
R + F +M G++PD+ + +++ + KEG ++ +G S
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSV-----MCKEGNFRREEGKQIHGFMLRNS 200
Query: 438 PDIEHF--TCLIDLLGRAGKLLEA 459
D + F T LID+ + G ++A
Sbjct: 201 LDTDSFLKTALIDMYFKFGLSIDA 224
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/552 (31%), Positives = 302/552 (54%), Gaps = 6/552 (1%)
Query: 21 GISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQ 80
G HA V+KM D+ V ++ +Y K G + KVF M ERN +WS M+SG+
Sbjct: 137 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYAT 196
Query: 81 AGEHLLALEFFS-----QMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS 135
G A++ F+ + ++Y+F + +S+ A + G+QIH ++K G
Sbjct: 197 RGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFV 256
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQ 195
+ N+L++MY K ++A ++ + + N ++++A++ G+ +N + + ++F M
Sbjct: 257 ALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSA 316
Query: 196 GLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEA 255
G+ P ++ G L CS L +G LH +K E + F ++ +Y+K + +A
Sbjct: 317 GIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADA 376
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
K F ++E+D+ W + I+ +D E+ L +++ M G+ P+D T AS+L AC+
Sbjct: 377 RKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKT-AGIIPNDPTMASVLKACSS 435
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
LA+++ GKQ+H H I+ +V +G+AL MY+KCG + +F +++VVSWN +
Sbjct: 436 LATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAM 495
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYG 435
I+ +++ G AL+LFE+M A G++PD VTF+ +++AC+H G V+ G YFN M G
Sbjct: 496 ISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIG 555
Query: 436 ISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLA 495
+ P ++H+ C++DLL RAG+L EA+E+ + + + LLSAC+ +G
Sbjct: 556 LDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAG 615
Query: 496 KQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKF 555
++L L +S YV LS +Y + G DV K ++ +G+ KE S IE++ + F
Sbjct: 616 EKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVF 675
Query: 556 TVAEFSHSKIGE 567
V + H I E
Sbjct: 676 VVGDTMHPMIEE 687
Score = 202 bits (515), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 250/487 (51%), Gaps = 16/487 (3%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
+ L HH S+ + L G ++H +++ G + +N ++N YAKCGK+ A +F+ +
Sbjct: 18 LKKLTHH-SQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAII 76
Query: 65 ERNLVSWSAMISGHHQAG---EHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
+++VSW+++I+G+ Q G ++ F +M +LPN Y A A + +QS
Sbjct: 77 CKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTV 136
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+Q HA +K +V SL+ MY K G D L V+ E N +++ +++G+
Sbjct: 137 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYAT 196
Query: 179 NQQPEKGFEVFKLMLR---QGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESN 235
+ E+ +VF L LR +G D + F L + + + G +HC+T+K L
Sbjct: 197 RGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGF 255
Query: 236 PFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSN 295
+ N ++ +YSK + EA K F +++ I+W+ + S + + + +F M +
Sbjct: 256 VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFS 315
Query: 296 DHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLIS 355
G++P ++T +L AC+ + ++ GKQ+H+ L+++ + + ALV+MYAK G ++
Sbjct: 316 -AGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLA 374
Query: 356 CSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACN 415
+ K F+ + R+V W ++I+ + + AL L+ +MK GI P+ T +L AC+
Sbjct: 375 DARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACS 434
Query: 416 HAGLVKEG-EAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
++ G + + ++++ +G+ I + L + + G L + ++ P +D +
Sbjct: 435 SLATLELGKQVHGHTIKHGFGLEVPIG--SALSTMYSKCGSLEDGNLVFRRTP-NKDVVS 491
Query: 475 LGTLLSA 481
++S
Sbjct: 492 WNAMISG 498
Score = 149 bits (375), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 188/378 (49%), Gaps = 15/378 (3%)
Query: 93 QMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSS 152
Q L P+ ++ + ++LV G+ +H ++ G ++ N L++ Y K G +
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 153 DALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEV---FKLMLRQGLLPDRFSFAGGLE 209
A ++ ++VS+N+LI G+ +N + V F+ M Q +LP+ ++ AG +
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 210 ICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKDLIS 269
S G H L VK + +V +++ +Y K L+ + K F + E++ +
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYT 186
Query: 270 WNTFIAACSHCADYEKGLSVF------KEMSNDHGVRPDDFTFASILAACAGLASVQHGK 323
W+T ++ + E+ + VF KE +D D+ F ++L++ A V G+
Sbjct: 187 WSTMVSGYATRGRVEEAIKVFNLFLREKEEGSD-----SDYVFTAVLSSLAATIYVGLGR 241
Query: 324 QIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR 383
QIH I+ L V + NALV MY+KC ++ + K+F+ RN ++W+ ++ ++ +
Sbjct: 242 QIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNG 301
Query: 384 LGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF 443
A+KLF +M + GIKP T +G+L AC+ ++EG+ + + K G +
Sbjct: 302 ESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK-LGFERHLFAT 360
Query: 444 TCLIDLLGRAGKLLEAEE 461
T L+D+ +AG L +A +
Sbjct: 361 TALVDMYAKAGCLADARK 378
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 185/574 (32%), Positives = 310/574 (54%), Gaps = 5/574 (0%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQ-PDVIVSNHVLNLYAKCGKMILARKVFDE 62
S L C + ++L G LH ++MGI+ P V++ N VL +Y +C + A K+FDE
Sbjct: 85 SYQCLFEACRELRSLSHGRLLHDR-MRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDE 143
Query: 63 MSERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKG 119
MSE N VS + MIS + + G A+ FS M P ++ + + + ++L G
Sbjct: 144 MSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFG 203
Query: 120 QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+QIHA+ ++ G S + + +++MY+K G+ A V+ + V+ L+ G+ +
Sbjct: 204 RQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQA 263
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ ++F ++ +G+ D F F+ L+ C+ +L G +H K LES VG
Sbjct: 264 GRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVG 323
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
++ Y K + A +AF+ I E + +SW+ I+ + +E+ + FK + + +
Sbjct: 324 TPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAS 383
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+ FT+ SI AC+ LA G Q+HA I+ L +AL+ MY+KCG + + +
Sbjct: 384 ILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANE 443
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F M + ++V+W I+ HA + AL+LFE+M + G+KP+SVTFI +LTAC+HAGL
Sbjct: 444 VFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGL 503
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V++G+ ++M + Y ++P I+H+ C+ID+ R+G L EA ++ K P D + L
Sbjct: 504 VEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFL 563
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
S C +++ +GE ++L L P T+ YVL NLY G W + A K++ + LKK
Sbjct: 564 SGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKK 623
Query: 540 EPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLK 573
E S S I+ +G +F V + H + EI LK
Sbjct: 624 ELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLK 657
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 120/247 (48%), Gaps = 5/247 (2%)
Query: 170 NALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVK 229
N + ++++ + FE + M + G+ +S+ E C L G +LH ++
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLH-DRMR 110
Query: 230 CKLESNPFV--GNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGL 287
+E NP V N ++ +Y + + +A+K F + E + +S T I+A + +K +
Sbjct: 111 MGIE-NPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAV 169
Query: 288 SVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNM 347
+F M G +P + ++L + ++ G+QIHAH+IR L + + +VNM
Sbjct: 170 GLFSGMLAS-GDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNM 228
Query: 348 YAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTF 407
Y KCG + + ++F++M + V+ ++ + ALKLF + G++ DS F
Sbjct: 229 YVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVF 288
Query: 408 IGLLTAC 414
+L AC
Sbjct: 289 SVVLKAC 295
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 320 bits (819), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 180/570 (31%), Positives = 315/570 (55%), Gaps = 9/570 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S LL C +++ ++ A +LK G P I + +++ KCG + AR+VFD M
Sbjct: 67 NFSQLLRQCIDERSISGIKTIQAHMLKSGF-PAEISGSKLVDASLKCGDIDYARQVFDGM 125
Query: 64 SERNLVSWSAMIS---GHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQ 120
SER++V+W+++I+ H ++ E + ++LP+EY +S A + + + Q
Sbjct: 126 SERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQ 185
Query: 121 QIHAYSLKFGY-ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVEN 179
+ H ++ G S FVG++L+ MY+K G + +A LV E ++V ALI G+ +
Sbjct: 186 RSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQK 245
Query: 180 QQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVG 239
+ + + F+ ML + + P+ +++A L C D+ G ++H L VK ES
Sbjct: 246 GEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQ 305
Query: 240 NTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGV 299
+++ +Y + +L+ ++ + F+ IE + +SW + I+ E L F++M D +
Sbjct: 306 TSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRD-SI 364
Query: 300 RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYK 359
+P+ FT +S L C+ LA + G+QIH + + ++D G+ L+++Y KCG +
Sbjct: 365 KPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARL 424
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F+ + +V+S NT+I ++A + G AL LFE+M G++P+ VT + +L ACN++ L
Sbjct: 425 VFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRL 484
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V+EG F+S K I +H+ C++DLLGRAG+L EAE T + + D ++ TLL
Sbjct: 485 VEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTLL 542
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
SAC++ R V + ER+ +++ ++P +L+SNLYAS G W V + +KD LKK
Sbjct: 543 SACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKK 602
Query: 540 EPSYSMIEVQGTFEKFTVAE-FSHSKIGEI 568
P+ S +E+ F + FSH +I
Sbjct: 603 NPAMSWVEINKETHTFMAGDLFSHPNSEQI 632
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 318 bits (816), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 196/589 (33%), Positives = 316/589 (53%), Gaps = 25/589 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
S S LL + K G +H V+K G + +V V + ++++YAKC ++ A + F E+
Sbjct: 103 SFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEI 162
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAG----IQSLVKG 119
SE N VSW+A+I+G Q + A M + +A++ AG + +L+
Sbjct: 163 SEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEM-------KAAVTMDAGTFAPLLTLLDD 215
Query: 120 -------QQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVY-GEAFEPNLVSFNA 171
+Q+HA LK G + N++IS Y G SDA V+ G +L+S+N+
Sbjct: 216 PMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNS 275
Query: 172 LIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCK 231
+IAGF +++ E FE+F M R + D +++ G L CS G LH + +K
Sbjct: 276 MIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKG 335
Query: 232 LESNPFVGNTIMALYSKFNLIGEAEKAFRLIEE---KDLISWNTFIAACSHCADYEKGLS 288
LE N ++++Y +F G E A L E KDLISWN+ I + E +
Sbjct: 336 LEQVTSATNALISMYIQFP-TGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVK 394
Query: 289 VFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMY 348
F + + ++ DD+ F+++L +C+ LA++Q G+QIHA + + V ++L+ MY
Sbjct: 395 FFSYLRSSE-IKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMY 453
Query: 349 AKCGLISCSYKLFNEMLHR-NVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTF 407
+KCG+I + K F ++ + + V+WN +I +A H LG +L LF QM +K D VTF
Sbjct: 454 SKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTF 513
Query: 408 IGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFP 467
+LTAC+H GL++EG N ME Y I P +EH+ +DLLGRAG + +A+E + P
Sbjct: 514 TAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMP 573
Query: 468 LGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAG 527
L DP+VL T L CR ++ + ++A L ++P YV LS++Y+ W + A
Sbjct: 574 LNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKAS 633
Query: 528 ARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEINYMLKTLS 576
+KM+K+ G+KK P +S IE++ + F + S+ +I M+K L+
Sbjct: 634 VKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLT 682
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/416 (31%), Positives = 215/416 (51%), Gaps = 15/416 (3%)
Query: 20 QGISL-HAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGH 78
Q +SL H +K G D+ VSN +L+ Y K G + A +FDEM +R+ VSW+ MISG+
Sbjct: 17 QKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGY 76
Query: 79 HQAGEHLLALEFFSQMHLLPNE---YIFASAISACAGIQSLVKGQQIHAYSLKFGYASIS 135
G+ A F+ M ++ Y F+ + A ++ G+Q+H +K GY
Sbjct: 77 TSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNV 136
Query: 136 FVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLM-LR 194
+VG+SL+ MY K DA + E EPN VS+NALIAGFV+ + + F + LM ++
Sbjct: 137 YVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMK 196
Query: 195 QGLLPDRFSFAGGLEICS---VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
+ D +FA L + N L++ +H +K L+ + N +++ Y+
Sbjct: 197 AAVTMDAGTFAPLLTLLDDPMFCNLLKQ---VHAKVLKLGLQHEITICNAMISSYADCGS 253
Query: 252 IGEAEKAFR-LIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASIL 310
+ +A++ F L KDLISWN+ IA S E +F +M H V D +T+ +L
Sbjct: 254 VSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQR-HWVETDIYTYTGLL 312
Query: 311 AACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAK--CGLISCSYKLFNEMLHRN 368
+AC+G GK +H +I+ L Q NAL++MY + G + + LF + ++
Sbjct: 313 SACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKD 372
Query: 369 VVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
++SWN+II A L A+K F ++++ IK D F LL +C+ ++ G+
Sbjct: 373 LISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQ 428
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 318 bits (815), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 185/563 (32%), Positives = 301/563 (53%), Gaps = 9/563 (1%)
Query: 24 LHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGE 83
+HA ++K DV V ++++ KC + A KVF+ M ER+ +W+AM+SG Q+G
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133
Query: 84 HLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
A F +M L P+ + I + + +SL + +HA ++ G V N+
Sbjct: 134 TDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANT 193
Query: 141 LISMYMKVGYSSDALLVYGEAFEP---NLVSFNALIAGFVENQQPEKGFEVFKLMLRQGL 197
IS Y K G A LV+ EA + +VS+N++ + + F ++ LMLR+
Sbjct: 194 WISTYGKCGDLDSAKLVF-EAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEF 252
Query: 198 LPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEK 257
PD +F C L +G ++H + + + NT +++YSK A
Sbjct: 253 KPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARL 312
Query: 258 AFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLA 317
F ++ + +SW I+ + D ++ L++F M G +PD T S+++ C
Sbjct: 313 LFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKS-GEKPDLVTLLSLISGCGKFG 371
Query: 318 SVQHGKQIHAHLIRMRLNQD-VGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTII 376
S++ GK I A +D V + NAL++MY+KCG I + +F+ + VV+W T+I
Sbjct: 372 SLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMI 431
Query: 377 AAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGI 436
A +A + + ALKLF +M KP+ +TF+ +L AC H+G +++G YF+ M++ Y I
Sbjct: 432 AGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNI 491
Query: 437 SPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAK 496
SP ++H++C++DLLGR GKL EA E + D + G LL+AC++ R+V I E+ A+
Sbjct: 492 SPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAE 551
Query: 497 QLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFT 556
LF+L+P +PYV ++N+YA+ GMW A R ++K +KK P S+I+V G FT
Sbjct: 552 SLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFT 611
Query: 557 VAEFSHSKIGEINYMLKTLSLAA 579
V E H + I + L LSL A
Sbjct: 612 VGEHGHVENEVIYFTLNGLSLFA 634
Score = 155 bits (392), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 198/429 (46%), Gaps = 26/429 (6%)
Query: 54 ILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISAC 110
++ R+++ ++ +W+ I + + +L F +M PN + F AC
Sbjct: 3 LIHRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKAC 62
Query: 111 AGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFN 170
A + + + +HA+ +K + S FVG + + M++K A V+ E + ++N
Sbjct: 63 ARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWN 122
Query: 171 ALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKC 230
A+++GF ++ +K F +F+ M + PD + ++ S L+ +H + ++
Sbjct: 123 AMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRL 182
Query: 231 KLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEKD--LISWNTFIAACSHCADYEKGLS 288
++ V NT ++ Y K + A+ F I+ D ++SWN+ K S
Sbjct: 183 GVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMF----------KAYS 232
Query: 289 VFKEMSNDHGV---------RPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG 339
VF E + G+ +PD TF ++ A+C ++ G+ IH+H I + +QD+
Sbjct: 233 VFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIE 292
Query: 340 VGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG 399
N ++MY+K + LF+ M R VSW +I+ +A AL LF M +G
Sbjct: 293 AINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSG 352
Query: 400 IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD-IEHFTCLIDLLGRAGKLLE 458
KPD VT + L++ C G ++ G+ + ++ YG D + LID+ + G + E
Sbjct: 353 EKPDLVTLLSLISGCGKFGSLETGK-WIDARADIYGCKRDNVMICNALIDMYSKCGSIHE 411
Query: 459 AEEYTKKFP 467
A + P
Sbjct: 412 ARDIFDNTP 420
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 185/390 (47%), Gaps = 13/390 (3%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD-- 61
++ +L+ S K+L+ ++HA +++G+ V V+N ++ Y KCG + A+ VF+
Sbjct: 155 TVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAI 214
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVK 118
+ +R +VSW++M + GE A + M P+ F + ++C ++L +
Sbjct: 215 DRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQ 274
Query: 119 GQQIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
G+ IH++++ G N+ ISMY K + A L++ VS+ +I+G+ E
Sbjct: 275 GRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAE 334
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLT--VKCKLESNP 236
++ +F M++ G PD + + C L G + CK N
Sbjct: 335 KGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCK-RDNV 393
Query: 237 FVGNTIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSND 296
+ N ++ +YSK I EA F EK +++W T IA + + + L +F +M D
Sbjct: 394 MICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMI-D 452
Query: 297 HGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVG--NALVNMYAKCGLI 354
+P+ TF ++L ACA S++ G + + H+++ N G+ + +V++ + G +
Sbjct: 453 LDYKPNHITFLAVLQACAHSGSLEKGWE-YFHIMKQVYNISPGLDHYSCMVDLLGRKGKL 511
Query: 355 SCSYKLFNEMLHR-NVVSWNTIIAAHANHR 383
+ +L M + + W ++ A HR
Sbjct: 512 EEALELIRNMSAKPDAGIWGALLNACKIHR 541
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 2/219 (0%)
Query: 256 EKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAG 315
+ +R+ + +WN I + D + L +F+EM G P++FTF + ACA
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRG-GFEPNNFTFPFVAKACAR 64
Query: 316 LASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTI 375
LA V + +HAHLI+ DV VG A V+M+ KC + + K+F M R+ +WN +
Sbjct: 65 LADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAM 124
Query: 376 IAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYG 435
++ A LF +M+ I PDSVT + L+ + + +K EA +++ G
Sbjct: 125 LSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEA-MHAVGIRLG 183
Query: 436 ISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIV 474
+ + I G+ G L A+ + G +V
Sbjct: 184 VDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVV 222
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 318 bits (814), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 171/492 (34%), Positives = 286/492 (58%), Gaps = 12/492 (2%)
Query: 87 ALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNSLISMYM 146
A++ L + ++ I C +++ +G I + G+ + F+ N LI+MY+
Sbjct: 48 AMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYV 107
Query: 147 KVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFAG 206
K +DA ++ + + N++S+ +I+ + + + +K E+ LMLR + P+ ++++
Sbjct: 108 KFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSS 167
Query: 207 GLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK- 265
L C+ +D+R +LHC +K LES+ FV + ++ +++K +GE E A + +E
Sbjct: 168 VLRSCNGMSDVR---MLHCGIIKEGLESDVFVRSALIDVFAK---LGEPEDALSVFDEMV 221
Query: 266 --DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGK 323
D I WN+ I + + + L +FK M G + T S+L AC GLA ++ G
Sbjct: 222 TGDAIVWNSIIGGFAQNSRSDVALELFKRMKR-AGFIAEQATLTSVLRACTGLALLELGM 280
Query: 324 QIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHR 383
Q H H+++ +QD+ + NALV+MY KCG + + ++FN+M R+V++W+T+I+ A +
Sbjct: 281 QAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG 338
Query: 384 LGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHF 443
ALKLFE+MK++G KP+ +T +G+L AC+HAGL+++G YF SM+K YGI P EH+
Sbjct: 339 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY 398
Query: 444 TCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQP 503
C+IDLLG+AGKL +A + + D + TLL ACR++R++V+ E AK++ L P
Sbjct: 399 GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDP 458
Query: 504 TTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHS 563
Y LLSN+YA+ W V R ++D G+KKEP S IEV F + + SH
Sbjct: 459 EDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHP 518
Query: 564 KIGEINYMLKTL 575
+I E++ L L
Sbjct: 519 QIVEVSKKLNQL 530
Score = 159 bits (401), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 207/417 (49%), Gaps = 19/417 (4%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+ S L+ C +A+ +G + + G +P + + N ++N+Y K + A ++FD+M
Sbjct: 63 TYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQM 122
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+RN++SW+ MIS + + H ALE M ++ PN Y ++S + +C G+ + +
Sbjct: 123 PQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---R 179
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
+H +K G S FV ++LI ++ K+G DAL V+ E + + +N++I GF +N
Sbjct: 180 MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNS 239
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGN 240
+ + E+FK M R G + ++ + L C+ L GM H V K + + + N
Sbjct: 240 RSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV--KYDQDLILNN 297
Query: 241 TIMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVR 300
++ +Y K + +A + F ++E+D+I+W+T I+ + ++ L +F+ M + G +
Sbjct: 298 ALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSS-GTK 356
Query: 301 PDDFTFASILAACAGLASVQHGKQIHAHLIRM----RLNQDVGVGNALVNMYAKCGLISC 356
P+ T +L AC+ ++ G + ++ + + G ++++ K G +
Sbjct: 357 PNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYG---CMIDLLGKAGKLDD 413
Query: 357 SYKLFNEM-LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLT 412
+ KL NEM + V+W T++ A R L + K + P+ LL+
Sbjct: 414 AVKLLNEMECEPDAVTWRTLLGACRVQR--NMVLAEYAAKKVIALDPEDAGTYTLLS 468
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 185/564 (32%), Positives = 297/564 (52%), Gaps = 14/564 (2%)
Query: 19 QQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGH 78
+ G +H + G ++++ ++++ +Y K ++ ARKVFD M E++ + W+ MISG+
Sbjct: 136 RAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGY 195
Query: 79 HQAGEHLLALEFFSQMHLLPNE-------YIFASAISACAGIQSLVKGQQIHAYSLKFGY 131
+ ++ +++ F L NE + A A +Q L G QIH+ + K G
Sbjct: 196 RKNEMYVESIQVFRD---LINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGC 252
Query: 132 ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKL 191
S +V IS+Y K G ++ E +P++V++NA+I G+ N + E +FK
Sbjct: 253 YSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKE 312
Query: 192 MLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNL 251
++ G R + + + VS L +H +K S+ V + +YSK N
Sbjct: 313 LMLSGA---RLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNE 369
Query: 252 IGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
I A K F EK L SWN I+ + E +S+F+EM P+ T IL+
Sbjct: 370 IESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSE-FSPNPVTITCILS 428
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVS 371
ACA L ++ GK +H + + V AL+ MYAKCG I+ + +LF+ M +N V+
Sbjct: 429 ACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVT 488
Query: 372 WNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSME 431
WNT+I+ + H G AL +F +M +GI P VTF+ +L AC+HAGLVKEG+ FNSM
Sbjct: 489 WNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMI 548
Query: 432 KTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIG 491
YG P ++H+ C++D+LGRAG L A ++ + + V TLL ACR+ +D +
Sbjct: 549 HRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLA 608
Query: 492 ERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGT 551
++++LF L P +VLLSN++++D + A R+ K L K P Y++IE+ T
Sbjct: 609 RTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGET 668
Query: 552 FEKFTVAEFSHSKIGEINYMLKTL 575
FT + SH ++ EI L+ L
Sbjct: 669 PHVFTSGDQSHPQVKEIYEKLEKL 692
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 211/461 (45%), Gaps = 14/461 (3%)
Query: 25 HAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAGEH 84
HA ++ G + D+ + + + G + AR +F + ++ ++ ++ G
Sbjct: 40 HAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESP 99
Query: 85 LLALEFFSQMH----LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGNS 140
+L F+ + L PN +A AISA +G + G+ IH ++ G S +G++
Sbjct: 100 HSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSN 159
Query: 141 LISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP- 199
++ MY K DA V+ E + + +N +I+G+ +N+ + +VF+ ++ +
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
D + L + +LR GM +H L K S+ +V ++LYSK I F
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALF 279
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
R + D++++N I + + E LS+FKE+ G R T S++ L +
Sbjct: 280 REFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS-GARLRSSTLVSLVPVSGHLMLI 338
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
IH + ++ V AL +Y+K I + KLF+E +++ SWN +I+ +
Sbjct: 339 Y---AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
+ L A+ LF +M+ + P+ VT +L+AC G + G+ + + + ++
Sbjct: 396 TQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGK-WVHDLVRSTDFESS 454
Query: 440 IEHFTCLIDLLGRAGKLLEAEE----YTKKFPLGQDPIVLG 476
I T LI + + G + EA TKK + + ++ G
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISG 495
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 3/122 (2%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I+ +L C++ AL G +H V + + VS ++ +YAKCG + AR++FD M
Sbjct: 422 TITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM 481
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
+++N V+W+ MISG+ G+ AL F +M + P F + AC+ + +G
Sbjct: 482 TKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGD 541
Query: 121 QI 122
+I
Sbjct: 542 EI 543
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 185/610 (30%), Positives = 322/610 (52%), Gaps = 41/610 (6%)
Query: 5 ISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMS 64
I +L+ + ++ K+ Q LHA ++ S V+++Y + A +F +
Sbjct: 8 IKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASI-VISIYTNLKLLHEALLLFKTLK 66
Query: 65 ERNLVSWSAMISGHHQAGEHLLALEFFSQMHL---LPNEYIFASAISACAGIQSLVKGQQ 121
+++W ++I AL F +M P+ +F S + +C + L G+
Sbjct: 67 SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGES 126
Query: 122 IHAYSLKFGYASISFVGNSLISMYMK---------VGYSSD------------------A 154
+H + ++ G + GN+L++MY K VG D
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETC 186
Query: 155 LLVYG-----EAFE----PNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLPDRFSFA 205
++ +G FE ++VS+N +IAG+ ++ E + + M L PD F+ +
Sbjct: 187 IMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLS 246
Query: 206 GGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIEEK 265
L I S D+ KG +H ++ ++S+ ++G++++ +Y+K I ++E+ F + +
Sbjct: 247 SVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCR 306
Query: 266 DLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQI 325
D ISWN+ +A Y + L +F++M V+P F+S++ ACA LA++ GKQ+
Sbjct: 307 DGISWNSLVAGYVQNGRYNEALRLFRQMVTAK-VKPGAVAFSSVIPACAHLATLHLGKQL 365
Query: 326 HAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLG 385
H +++R ++ + +ALV+MY+KCG I + K+F+ M + VSW II HA H G
Sbjct: 366 HGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHG 425
Query: 386 GSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTC 445
A+ LFE+MK G+KP+ V F+ +LTAC+H GLV E YFNSM K YG++ ++EH+
Sbjct: 426 HEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAA 485
Query: 446 LIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTT 505
+ DLLGRAGKL EA + K + V TLLS+C + +++ + E++A+++F +
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSEN 545
Query: 506 TSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKI 565
YVL+ N+YAS+G W ++A R ++ GL+K+P+ S IE++ F + SH +
Sbjct: 546 MGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSM 605
Query: 566 GEINYMLKTL 575
+IN LK +
Sbjct: 606 DKINEFLKAV 615
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 118/212 (55%), Gaps = 3/212 (1%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
++SS+L S+ + +G +H V++ GI DV + + ++++YAK ++ + +VF +
Sbjct: 244 TLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL 303
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQ 120
R+ +SW+++++G+ Q G + AL F QM + P F+S I ACA + +L G+
Sbjct: 304 YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGK 363
Query: 121 QIHAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQ 180
Q+H Y L+ G+ S F+ ++L+ MY K G A ++ + VS+ A+I G +
Sbjct: 364 QLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHG 423
Query: 181 QPEKGFEVFKLMLRQGLLPDRFSFAGGLEICS 212
+ +F+ M RQG+ P++ +F L CS
Sbjct: 424 HGHEAVSLFEEMKRQGVKPNQVAFVAVLTACS 455
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A + SS++ C+ L G LH VL+ G ++ +++ ++++Y+KCG + ARK+FD
Sbjct: 343 AVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFD 402
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGI 113
M+ + VSW+A+I GH G A+ F +M + PN+ F + ++AC+ +
Sbjct: 403 RMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHV 457
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 201/685 (29%), Positives = 338/685 (49%), Gaps = 119/685 (17%)
Query: 4 SISSLLHHCSKTKALQQGIS----------LHAAVLKMGIQPDVIVSNHVLNLYAKCGKM 53
S+S+LL C T LQ+ ++ +H V+K G+ V + N+++N+Y+K G
Sbjct: 8 SLSTLLELC--TNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYA 65
Query: 54 ILARKVFDEMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH------------------ 95
+ ARK+FDEM R SW+ ++S + + G+ EFF Q+
Sbjct: 66 LHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIG 125
Query: 96 ----------------LLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
+ P ++ + +++ A + + G+++H++ +K G V N
Sbjct: 126 QYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSN 185
Query: 140 SLISMY-------------------------------MKVGYSSDALLVYGEAFEPNLVS 168
SL++MY M+VG A+ + + E ++V+
Sbjct: 186 SLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVT 245
Query: 169 FNALIAGFVENQQPEKGFEVFKLMLRQGLL-PDRFSFAGGLEICSVSNDLRKGMILHCLT 227
+N++I+GF + + ++F MLR LL PDRF+ A L C+ L G +H
Sbjct: 246 WNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHI 305
Query: 228 VKCKLESNPFVGNTIMALYSKFNLIGEAEKAFRLIE------------------------ 263
V + + V N ++++YS+ G E A RLIE
Sbjct: 306 VTTGFDISGIVLNALISMYSR---CGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGD 362
Query: 264 ------------EKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILA 311
++D+++W I Y + +++F+ M G RP+ +T A++L+
Sbjct: 363 MNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGG-GQRPNSYTLAAMLS 421
Query: 312 ACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM-LHRNVV 370
+ LAS+ HGKQIH ++ V V NAL+ MYAK G I+ + + F+ + R+ V
Sbjct: 422 VASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTV 481
Query: 371 SWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSM 430
SW ++I A A H AL+LFE M G++PD +T++G+ +AC HAGLV +G YF+ M
Sbjct: 482 SWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMM 541
Query: 431 EKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVI 490
+ I P + H+ C++DL GRAG L EA+E+ +K P+ D + G+LLSACR+ +++ +
Sbjct: 542 KDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDL 601
Query: 491 GERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQG 550
G+ A++L L+P + Y L+NLY++ G W + A RK +KD +KKE +S IEV+
Sbjct: 602 GKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKH 661
Query: 551 TFEKFTVAEFSHSKIGEINYMLKTL 575
F V + +H + EI +K +
Sbjct: 662 KVHVFGVEDGTHPEKNEIYMTMKKI 686
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 174/413 (42%), Gaps = 94/413 (22%)
Query: 199 PDRFSFAGGLEICS--------VSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFN 250
P S + LE+C+ SN ++HC +K L + ++ N +M +YSK
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 251 LIGEAEKAFRLIEEKDLISWNTFIAACSHCAD---------------------------- 282
A K F + + SWNT ++A S D
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 283 ---YEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVG 339
Y K + V +M + G+ P FT ++LA+ A ++ GK++H+ ++++ L +V
Sbjct: 124 IGQYHKAIRVMGDMVKE-GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVS 182
Query: 340 VGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATG 399
V N+L+NMYAKCG + +F+ M+ R++ SWN +IA H A+ FEQM
Sbjct: 183 VSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMA--- 239
Query: 400 IKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEA 459
+ D VT+ +++ N G F+ M + +SPD FT
Sbjct: 240 -ERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPD--RFT--------------- 281
Query: 460 EEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLFHLQPTTTS---PYVLLSNLY 516
L ++LSAC + IG+++ H TT ++L+ L
Sbjct: 282 ---------------LASVLSACANLEKLCIGKQI-----HSHIVTTGFDISGIVLNALI 321
Query: 517 ASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAEFSHSKIGEIN 569
+ G V AR++++ G K ++++G FT + K+G++N
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKD------LKIEG----FTALLDGYIKLGDMN 364
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 317 bits (811), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 186/556 (33%), Positives = 296/556 (53%), Gaps = 37/556 (6%)
Query: 23 SLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERNLVSWSAMISGHHQAG 82
++H+ ++ ++ + + ++ YA + ARKVFDE+ ERN++ + MI + G
Sbjct: 60 TVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNG 119
Query: 83 EHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQIHAYSLKFGYASISFVGN 139
+ ++ F M ++ P+ Y F + AC+ ++V G++IH + K G +S FVGN
Sbjct: 120 FYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGN 179
Query: 140 SLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFEVFKLMLRQGLLP 199
L+SMY K G+ S+A LV E ++VS+N+L+ G+ +NQ+ + EV + M
Sbjct: 180 GLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM------- 232
Query: 200 DRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALYSKFNLIGEAEKAF 259
E +S+D G + L P V NT N++ + F
Sbjct: 233 ---------ESVKISHD--AGTMASLL---------PAVSNTTTE-----NVMYVKDMFF 267
Query: 260 RLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTFASILAACAGLASV 319
++ +K L+SWN I A + + ++ M D G PD + S+L AC +++
Sbjct: 268 KM-GKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEAD-GFEPDAVSITSVLPACGDTSAL 325
Query: 320 QHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAH 379
GK+IH ++ R +L ++ + NAL++MYAKCG + + +F M R+VVSW +I+A+
Sbjct: 326 SLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAY 385
Query: 380 ANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPD 439
G A+ LF +++ +G+ PDS+ F+ L AC+HAGL++EG + F M Y I+P
Sbjct: 386 GFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPR 445
Query: 440 IEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGERLAKQLF 499
+EH C++DLLGRAGK+ EA + + + + V G LL ACR+ D IG A +LF
Sbjct: 446 LEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLF 505
Query: 500 HLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKKEPSYSMIEVQGTFEKFTVAE 559
L P + YVLLSN+YA G W +V R ++K GLKK P S +EV F V +
Sbjct: 506 QLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGD 565
Query: 560 FSHSKIGEINYMLKTL 575
SH + EI L L
Sbjct: 566 RSHPQSDEIYRELDVL 581
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 184/450 (40%), Gaps = 56/450 (12%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
+L CS + + G +H + K+G+ + V N ++++Y KCG + AR V DEMS R+
Sbjct: 146 VLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRD 205
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSL 127
+VSW++++ G+ Q ALE +M + + + S + + ++ +
Sbjct: 206 VVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDM 265
Query: 128 KFGYASISFVG-NSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGF 186
F S V N +I +YMK +A+ +Y ++ GF
Sbjct: 266 FFKMGKKSLVSWNVMIGVYMKNAMPVEAVELY--------------------SRMEADGF 305
Query: 187 EVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIMALY 246
E PD S L C ++ L G +H + KL N + N ++ +Y
Sbjct: 306 E-----------PDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMY 354
Query: 247 SKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDDFTF 306
+K + +A F ++ +D++SW I+A +++F ++ D G+ PD F
Sbjct: 355 AKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKL-QDSGLVPDSIAF 413
Query: 307 ASILAACAGLASVQHGKQIHAHLI-RMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEM- 364
+ LAAC+ ++ G+ + ++ + +V++ + G + +Y+ +M
Sbjct: 414 VTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMS 473
Query: 365 LHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGE 424
+ N W ++ A H S T IGLL A L E
Sbjct: 474 MEPNERVWGALLGACRVH---------------------SDTDIGLLAADKLFQLAPEQS 512
Query: 425 AYFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
Y+ + Y + E T + +++ G
Sbjct: 513 GYYVLLSNIYAKAGRWEEVTNIRNIMKSKG 542
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 2 AKSISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFD 61
A SI+S+L C T AL G +H + + + P++++ N ++++YAKCG + AR VF+
Sbjct: 309 AVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFE 368
Query: 62 EMSERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVK 118
M R++VSW+AMIS + +G A+ FS++ L+P+ F + ++AC+ L +
Sbjct: 369 NMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEE 428
Query: 119 GQ 120
G+
Sbjct: 429 GR 430
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 16/209 (7%)
Query: 323 KQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLHRNVVSWNTIIAAHANH 382
+ +H+ +I L + +G L+ YA ++ + K+F+E+ RNV+ N +I ++ N+
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 383 RLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEH 442
G +K+F M ++PD TF +L AC+ +G + G S K G+S +
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKV-GLSSTLFV 177
Query: 443 FTCLIDLLGRAGKLLEA----EEYTKKFPLGQDPIVLG--------TLLSACRLRRDVVI 490
L+ + G+ G L EA +E +++ + + +V+G L CR V I
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKI 237
Query: 491 GE---RLAKQLFHLQPTTTSPYVLLSNLY 516
+A L + TTT + + +++
Sbjct: 238 SHDAGTMASLLPAVSNTTTENVMYVKDMF 266
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 316 bits (810), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 178/548 (32%), Positives = 304/548 (55%), Gaps = 10/548 (1%)
Query: 6 SSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSE 65
S L C++ + L G +H ++K+ +V+++ +L++YAKCG++ A KVF++++
Sbjct: 146 SKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG-LLDMYAKCGEIKSAHKVFNDITL 204
Query: 66 RNLVSWSAMISGHHQAGEHLLALEFFSQM---HLLPNEYIFASAISACAGIQSLVKGQQI 122
RN+V W++MI+G+ + L F++M ++L NEY + + I AC + +L +G+
Sbjct: 205 RNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWF 264
Query: 123 HAYSLKFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQP 182
H +K G S + SL+ MY+K G S+A V+ E +LV + A+I G+ N
Sbjct: 265 HGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSV 324
Query: 183 EKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKL-ESNPFVGNT 241
+ +F+ M + P+ + A L C + +L G +H L++K + ++N V N
Sbjct: 325 NEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN--VANA 382
Query: 242 IMALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRP 301
++ +Y+K +A+ F + EKD+++WN+ I+ S + L +F M N V P
Sbjct: 383 LVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM-NSESVTP 441
Query: 302 DDFTFASILAACAGLASVQHGKQIHAHLIRMRL--NQDVGVGNALVNMYAKCGLISCSYK 359
+ T AS+ +ACA L S+ G +HA+ +++ + V VG AL++ YAKCG +
Sbjct: 442 NGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARL 501
Query: 360 LFNEMLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGL 419
+F+ + +N ++W+ +I + +L+LFE+M KP+ TF +L+AC H G+
Sbjct: 502 IFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGM 561
Query: 420 VKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRAGKLLEAEEYTKKFPLGQDPIVLGTLL 479
V EG+ YF+SM K Y +P +H+TC++D+L RAG+L +A + +K P+ D G L
Sbjct: 562 VNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFL 621
Query: 480 SACRLRRDVVIGERLAKQLFHLQPTTTSPYVLLSNLYASDGMWGDVAGARKMLKDSGLKK 539
C + +GE + K++ L P S YVL+SNLYASDG W R ++K GL K
Sbjct: 622 HGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSK 681
Query: 540 EPSYSMIE 547
+S +E
Sbjct: 682 IAGHSTME 689
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 222/452 (49%), Gaps = 12/452 (2%)
Query: 8 LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEMSERN 67
LL C+ +L+Q H + G+ D+ ++ +++LY G AR VFD++ E +
Sbjct: 50 LLSKCTNIDSLRQS---HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 68 LVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQQIHA 124
W M+ + E + ++ + + ++ +F+ A+ AC +Q L G++IH
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 125 YSLKF-GYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPE 183
+K + ++ G L+ MY K G A V+ + N+V + ++IAG+V+N E
Sbjct: 167 QLVKVPSFDNVVLTG--LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCE 224
Query: 184 KGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFVGNTIM 243
+G +F M +L + +++ + C+ + L +G H VK +E + + +++
Sbjct: 225 EGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLL 284
Query: 244 ALYSKFNLIGEAEKAFRLIEEKDLISWNTFIAACSHCADYEKGLSVFKEMSNDHGVRPDD 303
+Y K I A + F DL+ W I +H + LS+F++M ++P+
Sbjct: 285 DMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE-IKPNC 343
Query: 304 FTFASILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNE 363
T AS+L+ C + +++ G+ +H I++ + D V NALV+MYAKC + +F
Sbjct: 344 VTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEM 402
Query: 364 MLHRNVVSWNTIIAAHANHRLGGSALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 423
+++V+WN+II+ + + AL LF +M + + P+ VT L +AC G + G
Sbjct: 403 ESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVG 462
Query: 424 EA-YFNSMEKTYGISPDIEHFTCLIDLLGRAG 454
+ + S++ + S + T L+D + G
Sbjct: 463 SSLHAYSVKLGFLASSSVHVGTALLDFYAKCG 494
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 160/314 (50%), Gaps = 19/314 (6%)
Query: 4 SISSLLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGKMILARKVFDEM 63
+I+S+L C + L+ G S+H +K+GI D V+N ++++YAKC + A+ VF+
Sbjct: 345 TIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEME 403
Query: 64 SERNLVSWSAMISGHHQAGEHLLALEFFSQMH---LLPNEYIFASAISACAGIQSLVKGQ 120
SE+++V+W+++ISG Q G AL F +M+ + PN AS SACA + SL G
Sbjct: 404 SEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGS 463
Query: 121 QIHAYSLKFGY--ASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVE 178
+HAYS+K G+ +S VG +L+ Y K G A L++ E N ++++A+I G+ +
Sbjct: 464 SLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGK 523
Query: 179 NQQPEKGFEVFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHCLTVKCKLESNPFV 238
E+F+ ML++ P+ +F L C + + +G K F
Sbjct: 524 QGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYK----DYNFT 579
Query: 239 GNT--IMALYSKFNLIGEAEKAFRLIE----EKDLISWNTFIAACSHCADYEKGLSVFKE 292
+T + GE E+A +IE + D+ + F+ C + ++ G V K+
Sbjct: 580 PSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKK 639
Query: 293 MSNDHGVRPDDFTF 306
M + H PDD ++
Sbjct: 640 MLDLH---PDDASY 650
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 205,075,358
Number of Sequences: 539616
Number of extensions: 8487754
Number of successful extensions: 27778
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 19094
Number of HSP's gapped (non-prelim): 2489
length of query: 579
length of database: 191,569,459
effective HSP length: 123
effective length of query: 456
effective length of database: 125,196,691
effective search space: 57089691096
effective search space used: 57089691096
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)