BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047474
(326 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5UPJ7|SYY_MIMIV Tyrosine--tRNA ligase OS=Acanthamoeba polyphaga mimivirus GN=YARS
PE=1 SV=1
Length = 346
Score = 256 bits (655), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 180/279 (64%), Gaps = 6/279 (2%)
Query: 14 STPQMSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAIS 73
+T + E + + SI EEC D L L+ Y+GFEPSGR+HIAQ ++ ++
Sbjct: 3 NTDHTNNEHRLTQLLSIAEECETLDRLKQLVDSGRIFTAYNGFEPSGRIHIAQALITVMN 62
Query: 74 VNKLTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSS 133
N + G ++ I++ADWFA++N KM GD+ KI+ +GRY IE++ A G+ + F+W+S
Sbjct: 63 TNNIIECGGQMIIYIADWFAKMNLKMNGDINKIRELGRYFIEVFKACGINLDGTRFIWAS 122
Query: 134 EEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFL- 192
E I A Y ++DIA + + R+ RCCQIMGR+E D L A+QI YPCMQ AD+F L
Sbjct: 123 EFI-ASNPSYIERMLDIAEFSTISRVKRCCQIMGRNESDCLKASQIFYPCMQAADVFELV 181
Query: 193 --KADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAI 250
DICQLG+DQRKVN+LA EY +D K PI LSHHML L ++KMSKSDP AI
Sbjct: 182 PEGIDICQLGIDQRKVNMLAIEYANDRGLK-IPISLSHHMLMSLSGPKKKMSKSDPQGAI 240
Query: 251 YMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPW 289
+M+D E EV+ KI +AYC + + NP EYIKY++ W
Sbjct: 241 FMDDTEQEVSEKISRAYCTDETFD-NPIFEYIKYLLLRW 278
>sp|Q6L2J1|SYY_PICTO Tyrosine--tRNA ligase OS=Picrophilus torridus (strain ATCC 700027 /
DSM 9790 / JCM 10055 / NBRC 100828) GN=tyrS PE=3 SV=1
Length = 329
Score = 205 bits (522), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 110/285 (38%), Positives = 167/285 (58%), Gaps = 13/285 (4%)
Query: 26 LVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKLTSAGCKVK 85
V+ EE + DE L P+ Y GFEPSG H+ ++ A +N + +AG K+
Sbjct: 6 FVKKNTEEIVTMDEAFKALNNNPK--GYIGFEPSGNPHLGTCLLLANKINDMVNAGIKMT 63
Query: 86 IWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEINARADEYWP 145
+ +ADW A +N+K+ GDL +I+ G W+A G+ + V+F+W+SE + +YW
Sbjct: 64 VLLADWHAMVNDKLNGDLNEIRKSGELFKRAWLAAGLNSN-VKFVWASELV--EKSDYWS 120
Query: 146 LVMDIARRNKLPRIMRCCQIMGRSEQD-ELTAAQILYPCMQCADIFFLKADICQLGMDQR 204
L++ +A+ L RI R IMGRSE+D + ++ +YP MQ DIF+L D GMDQR
Sbjct: 121 LLLKVAKNASLLRIRRSLPIMGRSEEDADRDFSKYIYPLMQVTDIFYLDVDFALGGMDQR 180
Query: 205 KVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQ-----EKMSKSDPSSAIYMEDEEAEV 259
++LAR+ + + K KP+ + +L L+ +KMSKS+P SAI+M D ++
Sbjct: 181 HAHMLARDIAERMNIK-KPVSVHTPLLSSLKGSGRMDSFKKMSKSEPDSAIFMTDSNDDI 239
Query: 260 NVKIKKAYCPPKIVEGNPCLEYIKYIIFP-WDKKFVVERSEANGG 303
KIK AYCP K V GNP ++ +KYIIFP ++ K ++R E+ GG
Sbjct: 240 KRKIKNAYCPMKEVNGNPVIDILKYIIFPYYNDKISIKRPESKGG 284
>sp|C6A0Z6|SYY_THESM Tyrosine--tRNA ligase OS=Thermococcus sibiricus (strain MM 739 /
DSM 12597) GN=tyrS PE=3 SV=1
Length = 375
Score = 200 bits (508), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/327 (36%), Positives = 179/327 (54%), Gaps = 33/327 (10%)
Query: 18 MSVEEKFRLV-RSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNK 76
M +E+K LV R EE + D L +LL Y GFE SG +H+ G+M +
Sbjct: 1 MDIEKKIELVSRKPTEEVLTVDNLKDLLEMGMPLQHYIGFEISGYIHLGTGLMAGAKIAD 60
Query: 77 LTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWI-----AVGMRTERVEFLW 131
AG K ++++ADW + +N+K+GGDL+ IQ V + + +G E+VEF+
Sbjct: 61 FQKAGIKTRVFLADWHSWINDKLGGDLEVIQKVALGYFKEGMKQSIKVMGGDPEKVEFVL 120
Query: 132 SSEEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFF 191
+SE I R D YW ++DI++ L R+MR IMGR + + A+++YP MQ ADIF+
Sbjct: 121 ASE-ILERGD-YWRTIIDISKNVTLARMMRSITIMGRQMGEAIDFAKLIYPAMQVADIFY 178
Query: 192 LKADICQLGMDQRKVNVLAREYCDDIK--------RKNKPIILSHHMLPGLQQ------- 236
+I GMDQRK +V+ARE + +K +K KPI + HH+L GLQ+
Sbjct: 179 QGVNIAHAGMDQRKAHVIAREVAEKLKYHPLVWDGKKVKPIAVHHHLLLGLQEPPKWPIE 238
Query: 237 ---------GQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIF 287
Q KMSKS P SA+++ D E+ K++KA+CP V NP L++ ++IIF
Sbjct: 239 GEEEFKEIKAQMKMSKSKPYSAVFIHDTPEEIKQKLRKAFCPAGEVNYNPVLDWAEHIIF 298
Query: 288 PWD-KKFVVERSEANGGNKTFETMKNL 313
+ +F + R GG+ T+ T + L
Sbjct: 299 REEPTEFTIHRPAKFGGDVTYTTFEEL 325
>sp|Q8U2H3|SYY_PYRFU Tyrosine--tRNA ligase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=tyrS PE=3 SV=1
Length = 375
Score = 197 bits (501), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 181/327 (55%), Gaps = 33/327 (10%)
Query: 18 MSVEEKFRLV-RSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNK 76
M +EE+ +LV + EE + + L +L Y GFE SG +H+ G+M +
Sbjct: 1 MDIEERIKLVLKKPTEEVLTVENLRHLFEIGAPLQHYIGFEISGYIHLGTGLMAGAKIAD 60
Query: 77 LTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWI-----AVGMRTERVEFLW 131
AG K ++++ADW + +N+K+GGDL+ IQ V ++ + +G + E+VEF+
Sbjct: 61 FQKAGIKTRVFLADWHSWINDKLGGDLETIQEVALKYFKVGMEKSIEVMGGKPEKVEFVL 120
Query: 132 SSEEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFF 191
+SE I + D YW V+DI++ L R++R IMGR + + A+++YP MQ ADIF+
Sbjct: 121 ASE-ILEKGD-YWQTVIDISKNVTLSRVLRSITIMGRKMGEAIDFAKLIYPMMQVADIFY 178
Query: 192 LKADICQLGMDQRKVNVLAREYCDDIK--------RKNKPIILSHHMLPGLQQ------- 236
I GMDQRK +V+A E + ++ K KP+ + HH+L GLQ+
Sbjct: 179 QGVTIAHAGMDQRKAHVIAIEVAEKLRYHPIIHNGEKLKPVAVHHHLLLGLQEPPKWPIE 238
Query: 237 ---------GQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIF 287
+ KMSKS P SA+++ D E+ K++KA+CP + V+ NP L++++Y++F
Sbjct: 239 SEEEFKEIKAEMKMSKSKPYSAVFIHDSPEEIREKLRKAFCPAREVKYNPVLDWVEYLVF 298
Query: 288 PWD-KKFVVERSEANGGNKTFETMKNL 313
+ +F + R GG+ T+ T + L
Sbjct: 299 REEPTEFTIHRPAKYGGDVTYTTFEEL 325
>sp|O58739|SYY_PYRHO Tyrosine--tRNA ligase OS=Pyrococcus horikoshii (strain ATCC 700860
/ DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=tyrS
PE=1 SV=1
Length = 375
Score = 196 bits (497), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/327 (34%), Positives = 177/327 (54%), Gaps = 33/327 (10%)
Query: 18 MSVEEKFRLV-RSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNK 76
M +EE+ LV + EE + + L +L Y GFE SG +H+ G+M +
Sbjct: 1 MDIEERINLVLKKPTEEVLTVENLRHLFEIGAPLQHYIGFEISGYIHLGTGLMAGAKIAD 60
Query: 77 LTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWI-----AVGMRTERVEFLW 131
AG K ++++ADW + +N+K+GGDL+ IQ V ++ + +G ++VEF+
Sbjct: 61 FQKAGIKTRVFLADWHSWINDKLGGDLEVIQEVALKYFKVGMEKSIEVMGGDPKKVEFVL 120
Query: 132 SSEEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFF 191
+SE I + D YW V+DI++ L R+MR IMGR + + A+++YP MQ ADIF+
Sbjct: 121 ASE-ILEKGD-YWQTVIDISKNVTLSRVMRSITIMGRQMGEAIDFAKLIYPMMQVADIFY 178
Query: 192 LKADICQLGMDQRKVNVLAREYCDDIK--------RKNKPIILSHHMLPGLQQ------- 236
I GMDQRK +V+A E ++ K KP+ + HH+L GLQ+
Sbjct: 179 QGVTIAHAGMDQRKAHVIAIEVAQKLRYHPIVHEGEKLKPVAVHHHLLLGLQEPPKWPIE 238
Query: 237 ---------GQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIF 287
Q KMSKS P SA+++ D E+ K++KA+CP + V NP L++++YIIF
Sbjct: 239 SEEEFKEIKAQMKMSKSKPYSAVFIHDSPEEIRQKLRKAFCPAREVRYNPVLDWVEYIIF 298
Query: 288 PWD-KKFVVERSEANGGNKTFETMKNL 313
+ +F V R GG+ T+ T + L
Sbjct: 299 REEPTEFTVHRPAKFGGDVTYTTFEEL 325
>sp|Q4JCH6|SYY_SULAC Tyrosine--tRNA ligase OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=tyrS PE=3 SV=1
Length = 361
Score = 194 bits (492), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/318 (36%), Positives = 178/318 (55%), Gaps = 24/318 (7%)
Query: 18 MSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKL 77
M+++EK +L+ +E I DEL L + + Y GFEPSG HI ++ A + L
Sbjct: 1 MNIDEKIKLITRNTDEVITIDELKKKLEENSKLKGYIGFEPSGLFHIGW-LIWAQKLKDL 59
Query: 78 TSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEIN 137
AG + I VA W A +N+K+GGDL+KI+ G+Y +E+ G+ +++ +++ E++
Sbjct: 60 IKAGVDMSILVATWHAMINDKLGGDLEKIKLAGKYALEVLEGFGVDMSKLKVVYA-EDLV 118
Query: 138 ARADEYWPLVMDIARRNKLPRIMRCCQIMGR-SEQDELTAAQILYPCMQCADIFFLKADI 196
D YW LV+ +A+ L R+ R IMGR SE+ EL ++++YP MQ +DIFF DI
Sbjct: 119 ENID-YWSLVVKVAKNTSLARMKRALTIMGRRSEEAELDTSKLIYPAMQVSDIFFQDLDI 177
Query: 197 CQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQE---------------KM 241
G DQRK ++LAR+ + ++RK K I + +L GLQ GQ KM
Sbjct: 178 ALGGTDQRKAHMLARDVAEKLQRK-KVIAIHTPLLVGLQGGQRMNTEGLEEDDYLATIKM 236
Query: 242 SKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIF-PWDKKFVVERSEA 300
SKS P +AI++ D V K+K +YCP +V NP L+ KYIIF +ER
Sbjct: 237 SKSKPETAIFIHDSPELVESKLKNSYCPKGVVNDNPVLQINKYIIFGEQGVTLKIERDTK 296
Query: 301 NGGN---KTFETMKNLLL 315
GG+ K++E ++ + +
Sbjct: 297 YGGDIEIKSYEELERIFI 314
>sp|Q9V027|SYY_PYRAB Tyrosine--tRNA ligase OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=tyrS PE=3 SV=1
Length = 375
Score = 193 bits (490), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/327 (34%), Positives = 175/327 (53%), Gaps = 33/327 (10%)
Query: 18 MSVEEKFRLV-RSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNK 76
M +EE+ LV + EE + + L +L Y GFE SG +H+ G+M +
Sbjct: 1 MDIEERINLVLKKPTEEVLTVENLRHLFEVGAPLQHYIGFEISGYIHLGTGLMAGAKIAD 60
Query: 77 LTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWI-----AVGMRTERVEFLW 131
AG K +I++ADW + +N+K+GGDL+ IQ V ++ + +G ++VEF+
Sbjct: 61 FQKAGIKTRIFLADWHSWINDKLGGDLEVIQEVALKYFKVGMEKSIEVMGGDPKKVEFVL 120
Query: 132 SSEEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFF 191
+SE + +YW V+DI++ L R+MR IMGR + + A+++YP MQ ADIF+
Sbjct: 121 ASEILEN--GDYWQTVIDISKNVTLSRVMRSITIMGRQMGESIDFAKLIYPMMQVADIFY 178
Query: 192 LKADICQLGMDQRKVNVLAREYCDDIK--------RKNKPIILSHHMLPGLQQ------- 236
I GMDQRK +V+A E +K K KP+ + HH+L GLQ+
Sbjct: 179 QGVTIAHAGMDQRKAHVIAIEVAQKLKYHPIVHNGEKLKPVAVHHHLLLGLQEPPVWPIT 238
Query: 237 ---------GQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIF 287
Q KMSKS P SA+++ D E+ K++KA+CP + V NP L++ ++IIF
Sbjct: 239 SEEQFKEIKAQMKMSKSKPYSAVFIHDSPEEIKQKLRKAFCPAREVNYNPVLDWAEHIIF 298
Query: 288 PWD-KKFVVERSEANGGNKTFETMKNL 313
+ +F + R GG+ T+ T + L
Sbjct: 299 REEPTEFTIHRPAKFGGDVTYTTFEEL 325
>sp|Q9YA64|SYY_AERPE Tyrosine--tRNA ligase OS=Aeropyrum pernix (strain ATCC 700893 / DSM
11879 / JCM 9820 / NBRC 100138 / K1) GN=tyrS PE=1 SV=1
Length = 364
Score = 193 bits (490), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/314 (36%), Positives = 175/314 (55%), Gaps = 21/314 (6%)
Query: 17 QMSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNK 76
++ VEE+F + E + E+EL LL + Y G+EPSG HI V V
Sbjct: 3 RVDVEERFNRIARNTVEIVTEEELKGLLASGARIKGYIGYEPSGVAHIGWLVW-MYKVKD 61
Query: 77 LTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEI 136
L AG + A W A +N+K+GGD+ I+ R + + A G+ ERV F+ +EE+
Sbjct: 62 LVEAGVDFSVLEATWHAYINDKLGGDMDLIRAAARIVRRVMEAAGVPVERVRFV-DAEEL 120
Query: 137 NARADEYWPLVMDIARRNKLPRIMRCCQIMGR-SEQDELTAAQILYPCMQCADIFFLKAD 195
+ D YW LV+ +A+R L R+ R IMGR +E+ E+ A++++YP MQ +DIF++ D
Sbjct: 121 ASDKD-YWGLVIRVAKRASLARVRRALTIMGRRAEEAEVDASKLIYPLMQVSDIFYMDLD 179
Query: 196 ICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQ--------QGQ-------EK 240
I GMDQRK ++LAR+ + + RK KP+ + ++ LQ QG+ K
Sbjct: 180 IALGGMDQRKAHMLARDVAEKLGRK-KPVAIHTPIISSLQGPGRMEASQGEIDDVLAEVK 238
Query: 241 MSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDK-KFVVERSE 299
MSKS P +A+++ D + ++ KI+KAYCP K V+GNP LE +YI+F D V+R
Sbjct: 239 MSKSKPETAVFVVDSDDDIRRKIRKAYCPAKQVQGNPVLEIARYILFARDGFTLRVDRPA 298
Query: 300 ANGGNKTFETMKNL 313
GG + + + L
Sbjct: 299 KYGGPVEYTSYEEL 312
>sp|Q96YV3|SYY_SULTO Tyrosine--tRNA ligase OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=tyrS PE=3 SV=3
Length = 364
Score = 191 bits (485), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 115/311 (36%), Positives = 171/311 (54%), Gaps = 19/311 (6%)
Query: 18 MSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKL 77
++VEEK +++ E + DEL L + + Y GFEPSG HI ++ A + L
Sbjct: 6 LNVEEKIKIISKNTAEIVTIDELRKKLEENQKLKGYIGFEPSGLFHIGW-LIWAQKLKDL 64
Query: 78 TSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEIN 137
G + I VA W A +N+K+GG+L KI+ G+Y IE+ A G+ +V +++ + +
Sbjct: 65 VDVGVDMSILVATWHAWINDKLGGNLDKIKLAGQYAIEVLNAYGVDMSKVRIVYAEDLV- 123
Query: 138 ARADEYWPLVMDIARRNKLPRIMRCCQIMGR-SEQDELTAAQILYPCMQCADIFFLKADI 196
+ YW LV+ IA+ L R+ R IMGR +E+ EL ++++YP MQ ADI + DI
Sbjct: 124 -KDSNYWALVIRIAKNTSLARMKRALTIMGRKAEEAELDTSKLIYPAMQVADILYQDLDI 182
Query: 197 CQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQE-------------KMSK 243
G DQRK ++LAR+ D + +K K I + +L GLQ GQ KMSK
Sbjct: 183 ALGGTDQRKAHMLARDVSDKLGKK-KVIAIHTPLLIGLQGGQRMEGVEEDDYLASVKMSK 241
Query: 244 SDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFV-VERSEANG 302
S P +AI++ D V K++ AYCP +V NP L+ KYIIF D + VER G
Sbjct: 242 SKPETAIFVHDPPEVVEAKLRSAYCPKGVVIDNPVLQINKYIIFAKDNATLKVERDIKYG 301
Query: 303 GNKTFETMKNL 313
G+ F++ + L
Sbjct: 302 GDIEFKSYEEL 312
>sp|C3MYZ9|SYY_SULIM Tyrosine--tRNA ligase OS=Sulfolobus islandicus (strain M.14.25 /
Kamchatka #1) GN=tyrS PE=3 SV=1
Length = 361
Score = 189 bits (480), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/315 (35%), Positives = 170/315 (53%), Gaps = 25/315 (7%)
Query: 18 MSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKL 77
MS++++ +L+ E I DEL L + + Y GFEPSG HI + V L
Sbjct: 1 MSIDQRLQLITRNAAEIITIDELRKKLESEEKLKGYIGFEPSGLFHIGWLIWTQ-KVKDL 59
Query: 78 TSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEIN 137
AG + + A W A +N+K+GGDL I+ Y +E+ G+ T ++ + + + +
Sbjct: 60 VEAGVNMTLLRATWHAWINDKLGGDLSLIKMAADYTVEVIKNYGVDTTKLNIVDADDMVK 119
Query: 138 ARADEYWPLVMDIARRNKLPRIMRCCQIMGR-SEQDELTAAQILYPCMQCADIFFLKADI 196
+ +YW LV+ +A+ + L RI R IMGR +E+ E+ A++++YP MQ +DIF+L DI
Sbjct: 120 EK--DYWALVIKVAKNSSLARIKRALTIMGRRAEEAEIDASKLIYPAMQVSDIFYLDLDI 177
Query: 197 CQLGMDQRKVNVLAREYCDDIKRKNKPIILSHH--MLPGLQQGQE--------------- 239
G DQRK ++LAR+ + + +K I+S H +L GLQ GQ
Sbjct: 178 ALGGTDQRKAHMLARDVAEKMGKKK---IVSIHTPLLVGLQGGQRMSITEGMEEDDIQAE 234
Query: 240 -KMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERS 298
KMSKS P SAI++ D +V KI AYCP + E NP L+ +KYIIFP +ER
Sbjct: 235 IKMSKSKPESAIFVSDSREDVERKIMGAYCPKGVAENNPILQILKYIIFPRYNFVKIERD 294
Query: 299 EANGGNKTFETMKNL 313
GG+ F+ + L
Sbjct: 295 IRYGGDVEFKDYEEL 309
>sp|C4KJ87|SYY_SULIK Tyrosine--tRNA ligase OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=tyrS PE=3 SV=1
Length = 361
Score = 189 bits (480), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/315 (35%), Positives = 170/315 (53%), Gaps = 25/315 (7%)
Query: 18 MSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKL 77
MS++++ +L+ E I DEL L + + Y GFEPSG HI + V L
Sbjct: 1 MSIDQRLQLITRNAAEIITIDELRKKLESEEKLKGYIGFEPSGLFHIGWLIWTQ-KVKDL 59
Query: 78 TSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEIN 137
AG + + A W A +N+K+GGDL I+ Y +E+ G+ T ++ + + + +
Sbjct: 60 VEAGVNMTLLRATWHAWINDKLGGDLSLIKMAADYTVEVIKNYGVDTTKLNIVDADDMVK 119
Query: 138 ARADEYWPLVMDIARRNKLPRIMRCCQIMGR-SEQDELTAAQILYPCMQCADIFFLKADI 196
+ +YW LV+ +A+ + L RI R IMGR +E+ E+ A++++YP MQ +DIF+L DI
Sbjct: 120 EK--DYWALVIKVAKNSSLARIKRALTIMGRRAEEAEIDASKLIYPAMQVSDIFYLDLDI 177
Query: 197 CQLGMDQRKVNVLAREYCDDIKRKNKPIILSHH--MLPGLQQGQE--------------- 239
G DQRK ++LAR+ + + +K I+S H +L GLQ GQ
Sbjct: 178 ALGGTDQRKAHMLARDVAEKMGKKK---IVSIHTPLLVGLQGGQRMSITEGMEEDDIQAE 234
Query: 240 -KMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERS 298
KMSKS P SAI++ D +V KI AYCP + E NP L+ +KYIIFP +ER
Sbjct: 235 IKMSKSKPESAIFVSDSREDVERKIMGAYCPKGVAENNPILQILKYIIFPRYNFVKIERD 294
Query: 299 EANGGNKTFETMKNL 313
GG+ F+ + L
Sbjct: 295 IRYGGDVEFKDYEEL 309
>sp|C3N8R2|SYY_SULIY Tyrosine--tRNA ligase OS=Sulfolobus islandicus (strain Y.G.57.14 /
Yellowstone #1) GN=tyrS PE=3 SV=1
Length = 361
Score = 188 bits (478), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 113/315 (35%), Positives = 169/315 (53%), Gaps = 25/315 (7%)
Query: 18 MSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKL 77
MS++++ +L+ E I DEL L + + Y GFEPSG HI + V L
Sbjct: 1 MSIDQRLQLITRNAAEIITIDELRKKLESEEKLKGYIGFEPSGLFHIGWLIWTQ-KVKDL 59
Query: 78 TSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEIN 137
AG + + A W A +N+K+GGDL I+ Y +E+ G+ T ++ + + + +
Sbjct: 60 VEAGVNMTLLRATWHAWINDKLGGDLSLIKMAADYTVEVIKNYGVDTTKLNIVDADDMVK 119
Query: 138 ARADEYWPLVMDIARRNKLPRIMRCCQIMGR-SEQDELTAAQILYPCMQCADIFFLKADI 196
+ +YW LV+ +A+ L RI R IMGR +E+ E+ A++++YP MQ +DIF+L DI
Sbjct: 120 EK--DYWALVIKVAKNASLARIKRALTIMGRRAEEAEIDASKLIYPAMQVSDIFYLDLDI 177
Query: 197 CQLGMDQRKVNVLAREYCDDIKRKNKPIILSHH--MLPGLQQGQE--------------- 239
G DQRK ++LAR+ + + +K I+S H +L GLQ GQ
Sbjct: 178 ALGGTDQRKAHMLARDVAEKMGKKK---IVSIHTPLLVGLQGGQRMSITEGMEEDDIQAE 234
Query: 240 -KMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERS 298
KMSKS P SAI++ D +V KI AYCP + E NP L+ +KYIIFP +ER
Sbjct: 235 IKMSKSKPESAIFVSDSREDVERKIMGAYCPKGVAENNPILQILKYIIFPRYNFVKIERD 294
Query: 299 EANGGNKTFETMKNL 313
GG+ F+ + L
Sbjct: 295 IRYGGDVEFKDYEEL 309
>sp|C3MJP1|SYY_SULIL Tyrosine--tRNA ligase OS=Sulfolobus islandicus (strain L.S.2.15 /
Lassen #1) GN=tyrS PE=3 SV=1
Length = 361
Score = 188 bits (478), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 113/315 (35%), Positives = 169/315 (53%), Gaps = 25/315 (7%)
Query: 18 MSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKL 77
MS++++ +L+ E I DEL L + + Y GFEPSG HI + V L
Sbjct: 1 MSIDQRLQLITRNAAEIITIDELRKKLESEEKLKGYIGFEPSGLFHIGWLIWTQ-KVKDL 59
Query: 78 TSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEIN 137
AG + + A W A +N+K+GGDL I+ Y +E+ G+ T ++ + + + +
Sbjct: 60 VEAGVNMTLLRATWHAWINDKLGGDLSLIKMAADYTVEVIKNYGVDTTKLNIVDADDMVK 119
Query: 138 ARADEYWPLVMDIARRNKLPRIMRCCQIMGR-SEQDELTAAQILYPCMQCADIFFLKADI 196
+ +YW LV+ +A+ L RI R IMGR +E+ E+ A++++YP MQ +DIF+L DI
Sbjct: 120 EK--DYWALVIKVAKNASLARIKRALTIMGRRAEEAEIDASKLIYPAMQVSDIFYLDLDI 177
Query: 197 CQLGMDQRKVNVLAREYCDDIKRKNKPIILSHH--MLPGLQQGQE--------------- 239
G DQRK ++LAR+ + + +K I+S H +L GLQ GQ
Sbjct: 178 ALGGTDQRKAHMLARDVAEKMGKKK---IVSIHTPLLVGLQGGQRMSITEGMEEDDIQAE 234
Query: 240 -KMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERS 298
KMSKS P SAI++ D +V KI AYCP + E NP L+ +KYIIFP +ER
Sbjct: 235 IKMSKSKPESAIFVSDSREDVERKIMGAYCPKGVAENNPILQILKYIIFPRYNFVKIERD 294
Query: 299 EANGGNKTFETMKNL 313
GG+ F+ + L
Sbjct: 295 IRYGGDVEFKDYEEL 309
>sp|C3N048|SYY_SULIA Tyrosine--tRNA ligase OS=Sulfolobus islandicus (strain M.16.27)
GN=tyrS PE=3 SV=1
Length = 361
Score = 188 bits (478), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 113/315 (35%), Positives = 169/315 (53%), Gaps = 25/315 (7%)
Query: 18 MSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKL 77
MS++++ +L+ E I DEL L + + Y GFEPSG HI + V L
Sbjct: 1 MSIDQRLQLITRNAAEIITIDELRKKLESEEKLKGYIGFEPSGLFHIGWLIWTQ-KVKDL 59
Query: 78 TSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEIN 137
AG + + A W A +N+K+GGDL I+ Y +E+ G+ T ++ + + + +
Sbjct: 60 VEAGVNMTLLRATWHAWINDKLGGDLSLIKMAADYTVEVIKNYGVDTTKLNIVDADDMVK 119
Query: 138 ARADEYWPLVMDIARRNKLPRIMRCCQIMGR-SEQDELTAAQILYPCMQCADIFFLKADI 196
+ +YW LV+ +A+ L RI R IMGR +E+ E+ A++++YP MQ +DIF+L DI
Sbjct: 120 EK--DYWALVIKVAKNASLARIKRALTIMGRRAEEAEIDASKLIYPAMQVSDIFYLDLDI 177
Query: 197 CQLGMDQRKVNVLAREYCDDIKRKNKPIILSHH--MLPGLQQGQE--------------- 239
G DQRK ++LAR+ + + +K I+S H +L GLQ GQ
Sbjct: 178 ALGGTDQRKAHMLARDVAEKMGKKK---IVSIHTPLLVGLQGGQRMSITEGMEEDDIQAE 234
Query: 240 -KMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERS 298
KMSKS P SAI++ D +V KI AYCP + E NP L+ +KYIIFP +ER
Sbjct: 235 IKMSKSKPESAIFVSDSREDVERKIMGAYCPKGVAENNPILQILKYIIFPRYNFVKIERD 294
Query: 299 EANGGNKTFETMKNL 313
GG+ F+ + L
Sbjct: 295 IRYGGDVEFKDYEEL 309
>sp|C3NMQ6|SYY_SULIN Tyrosine--tRNA ligase OS=Sulfolobus islandicus (strain Y.N.15.51 /
Yellowstone #2) GN=tyrS PE=3 SV=1
Length = 361
Score = 187 bits (476), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 112/315 (35%), Positives = 169/315 (53%), Gaps = 25/315 (7%)
Query: 18 MSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKL 77
MS++++ +L+ E I DEL + + + Y GFEPSG HI + V L
Sbjct: 1 MSIDQRLQLITRNAAEIITIDELRKKIESEEKLKGYIGFEPSGLFHIGWLIWTQ-KVKDL 59
Query: 78 TSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEIN 137
AG + + A W A +N+K+GGDL I+ Y +E+ G+ T ++ + + + +
Sbjct: 60 VEAGVNMTLLRATWHAWINDKLGGDLSLIKMAADYTVEVIKNYGVDTTKLNIVDADDMVK 119
Query: 138 ARADEYWPLVMDIARRNKLPRIMRCCQIMGR-SEQDELTAAQILYPCMQCADIFFLKADI 196
+ +YW LV+ +A+ L RI R IMGR +E+ E+ A++++YP MQ +DIF+L DI
Sbjct: 120 EK--DYWALVIKVAKNASLARIKRALTIMGRRAEEAEIDASKLIYPAMQVSDIFYLDLDI 177
Query: 197 CQLGMDQRKVNVLAREYCDDIKRKNKPIILSHH--MLPGLQQGQE--------------- 239
G DQRK ++LAR+ + + +K I+S H +L GLQ GQ
Sbjct: 178 ALGGTDQRKAHMLARDVAEKMGKKK---IVSIHTPLLVGLQGGQRMSITEGMEEDDIQAE 234
Query: 240 -KMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERS 298
KMSKS P SAI++ D +V KI AYCP + E NP L+ +KYIIFP +ER
Sbjct: 235 IKMSKSKPESAIFVSDSREDVERKIMGAYCPKGVAENNPILQILKYIIFPRYNFVKIERD 294
Query: 299 EANGGNKTFETMKNL 313
GG+ F+ + L
Sbjct: 295 IRYGGDVEFKDYEEL 309
>sp|A3MXW0|SYY_PYRCJ Tyrosine--tRNA ligase OS=Pyrobaculum calidifontis (strain JCM 11548
/ VA1) GN=tyrS PE=3 SV=1
Length = 372
Score = 186 bits (473), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/313 (36%), Positives = 167/313 (53%), Gaps = 27/313 (8%)
Query: 18 MSVEEKFRLV-RSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNK 76
M VEE+ LV R EE I +EL L + Y GFE SG +HI GV+ V
Sbjct: 1 MDVEERLSLVLRYPTEEVITVEELRELFQGGYKLNHYIGFEISGFIHIGTGVVSMSKVVD 60
Query: 77 LTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVG-RYLIEIWIAV----GMRTERVEFLW 131
L AG + +++AD + LNNK+GGDL I+ V Y +E + + G + F+
Sbjct: 61 LQRAGVRTTVFLADIHSWLNNKLGGDLDTIRRVAVTYYVETFKRIIEVLGGDPDATRFVL 120
Query: 132 SSEEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFF 191
S+ + DEYW L+MDI R L ++ I+GR + + A ++YP +Q AD+F
Sbjct: 121 GSD-LYHHNDEYWFLLMDITRHLTLSQVRHSLTILGRKMGESIPLAYLVYPPLQVADVFA 179
Query: 192 LKADICQLGMDQRKVNVLAREYCDDIK--------RKNKPIILSHHMLPGL--------- 234
L A I G+DQR+ ++LAR+ D I+ ++ KP+ L H +LP L
Sbjct: 180 LGAHIPHGGIDQRRAHILARQVADKIRFYPLTVDGKRIKPVALHHRLLPALNISSKPSSK 239
Query: 235 -QQGQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKK- 292
+ + KMSKS P SAI++ D E+ K+ KAYCPP+ VE NP LE ++ F ++K
Sbjct: 240 EELSELKMSKSIPQSAIFVHDSPEEIRQKVAKAYCPPREVEYNPVLELLRIAAFREERKT 299
Query: 293 -FVVERSEANGGN 304
V++R E GG+
Sbjct: 300 PLVIKRPEKYGGD 312
>sp|Q8ZYT7|SYY1_PYRAE Tyrosine--tRNA ligase 1 OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=tyrS1 PE=3 SV=1
Length = 372
Score = 186 bits (472), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/325 (36%), Positives = 171/325 (52%), Gaps = 30/325 (9%)
Query: 18 MSVEEKFRLV-RSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNK 76
M VE K L+ R EE I +EL LL Q Y GFE SG +HI G++ V
Sbjct: 1 MDVESKISLILRYPTEEVITVEELRELLQLGHQLNHYIGFEISGFIHIGTGIVSMSKVVD 60
Query: 77 LTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVG-RYLIEIWIAV----GMRTERVEFLW 131
L AG + +I +AD + LNNK+GGDL I+ V Y IE + V G + F+
Sbjct: 61 LQRAGVRTQILLADIHSWLNNKLGGDLDTIRKVAVTYYIEAFKKVIETLGGDPDATRFVL 120
Query: 132 SSEEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFF 191
S+ + DEYW L+MDI R L ++ I+GR + + A ++YP +Q AD+F
Sbjct: 121 GSD-LYHHNDEYWLLLMDITRHLTLSQVRHSLTILGRKMGESIPLAYLVYPPLQVADVFA 179
Query: 192 LKADICQLGMDQRKVNVLAREYCDDIK--------RKNKPIILSHHMLPGL--------- 234
L A I G+DQR+ ++LAR+ D I+ ++ KP+ L H +LP L
Sbjct: 180 LGAHIPHGGVDQRRAHILARQVADKIRFYPLEVGGKRVKPVALHHKLLPALNISTKPSNK 239
Query: 235 -QQGQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKK- 292
+ + KMSKS P SAI++ D E+ KI KAYCPP+ E NP LE + F ++K
Sbjct: 240 EELSEMKMSKSVPQSAIFIHDSPEEIRQKISKAYCPPRETEYNPVLELLHISAFREERKT 299
Query: 293 -FVVERSEANGGNK---TFETMKNL 313
F+++R GG+ T+E ++ L
Sbjct: 300 PFIIKRPPQYGGDIEVWTYEEVERL 324
>sp|A4WN67|SYY_PYRAR Tyrosine--tRNA ligase OS=Pyrobaculum arsenaticum (strain DSM 13514
/ JCM 11321) GN=tyrS PE=3 SV=1
Length = 372
Score = 184 bits (467), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 114/313 (36%), Positives = 166/313 (53%), Gaps = 27/313 (8%)
Query: 18 MSVEEKFRLV-RSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNK 76
M VE + L+ R EE I +EL +L + Y GFE SG +HI GV+ V
Sbjct: 1 MDVESRLSLILRYPAEEVITVEELKEILQAGYKLNHYIGFEISGFIHIGTGVVSMSKVVD 60
Query: 77 LTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVG-RYLIEIWIAV----GMRTERVEFLW 131
L AG + +I +AD + LNNK+GGDL+ I+ V Y +E + + G + F+
Sbjct: 61 LQKAGVRTQILLADIHSWLNNKLGGDLETIRRVAVTYYVETFKKIIEVLGGDPDGTRFVL 120
Query: 132 SSEEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFF 191
S+ + DEYW L+MDI R L ++ I+GR + + A ++YP +Q AD+F
Sbjct: 121 GSD-LYHHNDEYWLLLMDITRHLTLSQVRHSLTILGRKMGESIPLAYLVYPPLQVADVFA 179
Query: 192 LKADICQLGMDQRKVNVLAREYCDDIK--------RKNKPIILSHHMLPGL--------- 234
L A I G+DQR+ ++LARE I+ ++ KP+ L H +LP L
Sbjct: 180 LGAHIPHGGIDQRRAHILAREVAHKIRFYPLEVDGKRVKPVALHHRLLPALNISAKPASK 239
Query: 235 -QQGQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKK- 292
+ + KMSKS P SAI++ D E+ KI KAYCPP+ VE NP LE ++ F ++K
Sbjct: 240 EELSELKMSKSIPQSAIFVHDSPEEIKQKIAKAYCPPREVEYNPVLELLRVSAFREERKT 299
Query: 293 -FVVERSEANGGN 304
FV+ R GG+
Sbjct: 300 PFVIRRPAQYGGD 312
>sp|A1RSH9|SYY_PYRIL Tyrosine--tRNA ligase OS=Pyrobaculum islandicum (strain DSM 4184 /
JCM 9189) GN=tyrS PE=3 SV=1
Length = 372
Score = 183 bits (464), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/313 (36%), Positives = 166/313 (53%), Gaps = 27/313 (8%)
Query: 18 MSVEEKFRLV-RSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNK 76
M +EE+ LV + EE I +EL L + Y GFE SG +HI GV+ V
Sbjct: 1 MDIEERISLVLKYPTEEVITVEELRELFQSGYKLNHYIGFEISGFIHIGTGVVSMSKVVD 60
Query: 77 LTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVG-RYLIEIWIAV----GMRTERVEFLW 131
L AG K ++++AD + LNNK+GGDL I+ V Y +E + + G + F+
Sbjct: 61 LQKAGVKTQVFLADIHSWLNNKLGGDLDIIRKVAVTYYVETFKKIIEVLGGDPDATRFIL 120
Query: 132 SSEEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFF 191
SE + DEYW L+MDI R L ++ I+GR + + A ++YP +Q AD+F
Sbjct: 121 GSE-LYHHNDEYWLLLMDITRHLTLSQVRHSLTILGRKMGESIPLAYLVYPPLQVADVFA 179
Query: 192 LKADICQLGMDQRKVNVLAREYCDDIK--------RKNKPIILSHHMLPGL--------- 234
L+A I G+DQR+ ++LAR+ D I+ ++ KP+ L H +LP L
Sbjct: 180 LEAHIPHGGIDQRRAHILARQVADKIRFYPLKVDGKRIKPVALHHKLLPALNITSKPSSR 239
Query: 235 -QQGQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKK- 292
+ + KMSKS P SAI++ D E+ KI KAYCPP+ E NP LE ++ F +K
Sbjct: 240 EELSEMKMSKSIPQSAIFVHDSPDEIRQKIAKAYCPPRDTEYNPVLELLRISAFREKRKT 299
Query: 293 -FVVERSEANGGN 304
V++R GG+
Sbjct: 300 PLVIKRPAQYGGD 312
>sp|P95982|SYY_SULSO Tyrosine--tRNA ligase OS=Sulfolobus solfataricus (strain ATCC 35092
/ DSM 1617 / JCM 11322 / P2) GN=tyrS PE=3 SV=1
Length = 366
Score = 183 bits (464), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/315 (35%), Positives = 167/315 (53%), Gaps = 25/315 (7%)
Query: 18 MSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKL 77
MS++++ +L+ E I DEL L + Y GFEPSG HI + V L
Sbjct: 6 MSIDQRLQLIMRNTAEVITIDELRKKLESDEKLKGYIGFEPSGLFHIGWLIWTQ-KVKDL 64
Query: 78 TSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEIN 137
AG + + A W A +N+K+GGD+ I+ Y +E+ G+ ++ + + + +
Sbjct: 65 VEAGINMTLLRAAWHAWINDKLGGDMNLIKMAADYAVEVIKNYGVDVGKLNIVDADDIVK 124
Query: 138 ARADEYWPLVMDIARRNKLPRIMRCCQIMGR-SEQDELTAAQILYPCMQCADIFFLKADI 196
+ +YW LV+ +A+ L RI R IMGR +E+ E+ A++++YP MQ +DIF+L DI
Sbjct: 125 EK--DYWALVIKVAKNASLARIKRALTIMGRRAEEAEIDASKLIYPAMQVSDIFYLDLDI 182
Query: 197 CQLGMDQRKVNVLAREYCDDIKRKNKPIILSHH--MLPGLQQGQE--------------- 239
G DQRK ++LAR+ + + +K I+S H +L GLQ GQ
Sbjct: 183 ALGGTDQRKAHMLARDVAEKMGKKK---IVSIHTPLLVGLQGGQRMNITEGMEEDDIQAE 239
Query: 240 -KMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERS 298
KMSKS P SAI++ D +V KI AYCP + E NP L+ +KYIIFP +ER
Sbjct: 240 IKMSKSKPESAIFVNDSREDVERKIMGAYCPKGVAENNPILQILKYIIFPRYNFVKIERD 299
Query: 299 EANGGNKTFETMKNL 313
GG+ F+ + L
Sbjct: 300 IKYGGDVEFKDYEEL 314
>sp|Q5JF63|SYY_PYRKO Tyrosine--tRNA ligase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=tyrS PE=3 SV=1
Length = 375
Score = 179 bits (453), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 178/327 (54%), Gaps = 33/327 (10%)
Query: 18 MSVEEKFRLVRS-IGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNK 76
M +E K L++ EE + E+ L +LL Y GFE SG +H+ G+M +
Sbjct: 1 MDIERKIELIKKKPTEELLTEENLRHLLEVGAPLQHYIGFEISGYIHLGTGLMAGAKIAD 60
Query: 77 LTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWI-----AVGMRTERVEFLW 131
L AG K +I++ADW + +N+K+GGDL+ IQ V + + +G ++VEF+
Sbjct: 61 LQKAGVKTRIFLADWHSWINDKLGGDLEVIQKVALTYFKEGMKQSIKVMGGDPDKVEFVL 120
Query: 132 SSEEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFF 191
+SE ++ +YW V+DI++ L R++R IMGR + + A+++YP MQ ADIF+
Sbjct: 121 ASEILDK--GDYWQTVIDISKNVTLARMLRSITIMGRQMGEAIDFAKLIYPAMQVADIFY 178
Query: 192 LKADICQLGMDQRKVNVLAREYCDDIK--------RKNKPIILSHHMLPGLQQ------- 236
I GMDQRK +V+A E +K K KP+ L HH+L GLQ+
Sbjct: 179 QGVTIAHAGMDQRKAHVIAIEVAQKLKYHPLEWKGEKLKPVALHHHLLLGLQEPPVWPIE 238
Query: 237 ---------GQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIF 287
Q KMSKS P SA+++ D E+ K++KA+CP + V+ NP L++ +YIIF
Sbjct: 239 SEEQFKELKTQMKMSKSKPYSAVFIHDSPEEIKQKLRKAFCPAREVKYNPVLDWAEYIIF 298
Query: 288 PWD-KKFVVERSEANGGNKTFETMKNL 313
+ +F + R GG+ T+ T + L
Sbjct: 299 REEPTEFTIHRPAKFGGDVTYTTFEEL 325
>sp|Q9HKT3|SYY_THEAC Tyrosine--tRNA ligase OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=tyrS PE=3 SV=1
Length = 332
Score = 178 bits (451), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 150/260 (57%), Gaps = 18/260 (6%)
Query: 52 CYDGFEPSGRMHIAQGVMKAISVNKLTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGR 111
Y G EPSG HIA VM + ++ KV + +ADW A +NNK+ GDL I+ G
Sbjct: 31 SYIGIEPSGIPHIATAVMWPRKLAEIQD-DIKVTVLLADWHAMINNKLHGDLDLIRKGGE 89
Query: 112 YLIEIWIAVGMRTERVEFLWSSEEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQ 171
L + + A G+ + +++W+S+ +++ EYW + +D A+R+ L R++R IMGR+E
Sbjct: 90 ILRKTFQAEGL--TKADYVWASDLVDS--SEYWRMFIDTAKRSTLKRVIRSLPIMGRNET 145
Query: 172 D-ELTAAQILYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHM 230
D E + LYP MQ DIF+L D+ GMDQR ++LAR+ + +KRK ++ H
Sbjct: 146 DAEKDFSMYLYPIMQVTDIFYLDVDMAFGGMDQRHAHMLARDIAEKMKRKK--VVSVHGF 203
Query: 231 LPGLQQGQE------KMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKY 284
L +G KMSKSDP+SAI + D ++ KI AYCPP+ VEGNP E +KY
Sbjct: 204 LLSSLKGNARMDNFVKMSKSDPNSAILVTDHMEDIERKINAAYCPPQQVEGNPVAEIMKY 263
Query: 285 IIFPWDKKFVVERSEANGGN 304
II P+ K + E +G N
Sbjct: 264 IIIPYYGKSI----EIHGSN 279
>sp|C5A5R0|SYY_THEGJ Tyrosine--tRNA ligase OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=tyrS PE=3 SV=1
Length = 375
Score = 174 bits (441), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 113/312 (36%), Positives = 169/312 (54%), Gaps = 32/312 (10%)
Query: 32 EECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKLTSAGCKVKIWVADW 91
EE + E+ L +L Y GFE SG +H+ G+M + L AG K +I++ADW
Sbjct: 16 EELLTEENLRHLFEVGIPMQHYIGFEISGYIHLGTGLMAGAKIADLQKAGIKTRIFLADW 75
Query: 92 FAQLNNKMGGDLKKIQTVGRYLIEIWI-----AVGMRTERVEFLWSSEEINARADEYWPL 146
+ +N+K+GGDL+ IQ V + + +G ++VEF+ +SE I + D YW
Sbjct: 76 HSWINDKLGGDLETIQKVALTYFKEGMKQSIKVMGGDPDKVEFVLASE-ILEKGD-YWQT 133
Query: 147 VMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLKADICQLGMDQRKV 206
V+DI++ L R+MR IMGR + + A+++YP MQ ADIF+ I GMDQRK
Sbjct: 134 VIDISKNVTLARMMRSITIMGRQMGESIDFAKLIYPAMQVADIFYQGVTIAHAGMDQRKA 193
Query: 207 NVLAREYCDDIK--------RKNKPIILSHHMLPGLQQ----------------GQEKMS 242
+V+A E +K K KP+ L HH+L GLQ+ Q KMS
Sbjct: 194 HVIAIEVAQKLKYHPLEWKGEKLKPVALHHHLLLGLQEPPVWPIESEEQFKELKTQMKMS 253
Query: 243 KSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWD-KKFVVERSEAN 301
KS P SA+++ D E+ K++KA+CP + V NP L++ +YIIF + +F + R
Sbjct: 254 KSKPYSAVFIHDSPEEIRQKLRKAFCPAREVRYNPVLDWAEYIIFREEPTEFTIHRPAKF 313
Query: 302 GGNKTFETMKNL 313
GG+ T+ T + L
Sbjct: 314 GGDVTYTTSEEL 325
>sp|B6YWK6|SYY_THEON Tyrosine--tRNA ligase OS=Thermococcus onnurineus (strain NA1)
GN=tyrS PE=3 SV=1
Length = 375
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/327 (35%), Positives = 176/327 (53%), Gaps = 33/327 (10%)
Query: 18 MSVEEKFRLV-RSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNK 76
M + K L+ + EE + + L +LL Y GFE SG +H+ G+M +
Sbjct: 1 MDIGRKIELITKRPTEELLTVENLRHLLEIGAPMQHYIGFEISGYIHLGTGLMAGAKIAD 60
Query: 77 LTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWI-----AVGMRTERVEFLW 131
L AG K +I++ADW + +N+K+GGDL+ IQ V + + +G ++VEF+
Sbjct: 61 LQKAGIKTRIFLADWHSWINDKLGGDLEIIQKVALTYFKEGMKQSIKVMGGDPDKVEFVL 120
Query: 132 SSEEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFF 191
+SE I + D YW V+DI++ L R+MR IMGR + + A+++YP MQ ADIF+
Sbjct: 121 ASE-ILEKGD-YWQTVIDISKNVTLARMMRSITIMGRQMGEAIDFAKLIYPAMQVADIFY 178
Query: 192 LKADICQLGMDQRKVNVLAREYCDDIK--------RKNKPIILSHHMLPGLQQ------- 236
I GMDQRK +V+A E +K K KP+ L HH+L GLQ+
Sbjct: 179 QGVTIAHAGMDQRKAHVIAIEVAQKLKYHAIEHNGEKLKPVALHHHLLLGLQEPPVWPIE 238
Query: 237 ---------GQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIF 287
Q KMSKS P SA+++ D E+ K++KA+CP + V+ NP L++ +YIIF
Sbjct: 239 SEEQYKELKTQMKMSKSKPYSAVFIHDTPEEIKQKLRKAFCPAREVKYNPVLDWAEYIIF 298
Query: 288 PWD-KKFVVERSEANGGNKTFETMKNL 313
+ +F + R GG+ T+ T + L
Sbjct: 299 REEPTEFTIHRPAKFGGDVTYTTFEEL 325
>sp|Q979Z1|SYY_THEVO Tyrosine--tRNA ligase OS=Thermoplasma volcanium (strain ATCC 51530
/ DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=tyrS PE=3
SV=1
Length = 331
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/265 (36%), Positives = 152/265 (57%), Gaps = 13/265 (4%)
Query: 44 LTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKLTSAGCKVKIWVADWFAQLNNKMGGDL 103
L +K Y G EPSG H+A VM + +L K+ + +ADW A +NNK+ GDL
Sbjct: 22 LDQKAGVKSYIGIEPSGIPHVATAVMWPRKLAELQD-DIKIYVLLADWHAMINNKLHGDL 80
Query: 104 KKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEINARADEYWPLVMDIARRNKLPRIMRCC 163
I+ G L ++A G+ + E+LW+S+ +++ YW + + A+R+ L R+ R
Sbjct: 81 DLIRKGGELLKRSFMAEGL--TKAEYLWASQLVSSS--NYWEMFIKTAKRSTLKRLTRAL 136
Query: 164 QIMGRSEQD-ELTAAQILYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNK 222
IMGR+E D E + +YP MQ DIF+L DI GMDQR ++LAR+ D +K K K
Sbjct: 137 PIMGRTEADAEKDFSMYIYPIMQVTDIFYLDVDIAFGGMDQRHAHMLARDIADKMKVK-K 195
Query: 223 PIILSHHMLPGLQQGQE-----KMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNP 277
+ + ++L L+ KMSKSDP+SAI + DE ++ K+ A+CPP+ V+GNP
Sbjct: 196 AVSVHGYLLSSLKGNTRMDNFVKMSKSDPNSAILINDEYKDIERKVNAAFCPPEKVDGNP 255
Query: 278 CLEYIKYIIFP-WDKKFVVERSEAN 301
E +KY++ P + + ++E+ N
Sbjct: 256 LAEIMKYVLIPYYGRDIIIEKPSGN 280
>sp|O29482|SYY_ARCFU Tyrosine--tRNA ligase OS=Archaeoglobus fulgidus (strain ATCC 49558
/ VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=tyrS
PE=1 SV=1
Length = 323
Score = 163 bits (413), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 161/296 (54%), Gaps = 10/296 (3%)
Query: 18 MSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKL 77
M + EK RL+ EE + E+EL L+ K +P Y G+EPSG +H+ +M + L
Sbjct: 1 MDITEKLRLITRNAEEVVTEEELRQLIETKEKPRAYVGYEPSGEIHLGH-MMTVQKLMDL 59
Query: 78 TSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEIN 137
AG ++ + +AD A LN K G ++I V Y +++IA+G+ R +F+ SE
Sbjct: 60 QEAGFEIIVLLADIHAYLNEK--GTFEEIAEVADYNKKVFIALGLDESRAKFVLGSEYQL 117
Query: 138 ARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLKADIC 197
+R +Y V+ +AR L R R + R ++D + + Q++YP MQ DI L D+
Sbjct: 118 SR--DYVLDVLKMARITTLNRARRSMDEVSRRKEDPMVS-QMIYPLMQALDIAHLGVDLA 174
Query: 198 QLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYMEDEEA 257
G+DQRK+++LARE + + P+ L +L GL GQ KMS S + I + D
Sbjct: 175 VGGIDQRKIHMLARENLPRLG-YSSPVCLHTPILVGLD-GQ-KMSSSK-GNYISVRDPPE 230
Query: 258 EVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFETMKNL 313
EV KI+KAYCP +VE NP L+ KY I P K VVER GG+ + + + L
Sbjct: 231 EVERKIRKAYCPAGVVEENPILDIAKYHILPRFGKIVVERDAKFGGDVEYASFEEL 286
>sp|Q74MD3|SYY_NANEQ Tyrosine--tRNA ligase OS=Nanoarchaeum equitans (strain Kin4-M)
GN=tyrS PE=3 SV=1
Length = 376
Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 163/326 (50%), Gaps = 32/326 (9%)
Query: 18 MSVEEKFRLV-RSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNK 76
M +EE+ L+ + EE + D L L + Y GFE SG +H+ G++ + V
Sbjct: 1 MDIEERINLIAQKPTEEILTIDRLKQYLEQGIDLNHYIGFEISGFVHLGTGIISMLKVRD 60
Query: 77 LTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRT-----ERVEFLW 131
A K +++AD+ + +N K+GGDL+ I+ V + + V ++T + V+ +
Sbjct: 61 FQKAKVKTTLFLADYHSWINKKLGGDLETIRKVAKGYFAEALKVSLKTVGGDPDEVKVVL 120
Query: 132 SSEEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFF 191
SE EY ++ I+ L RI + IMGR + + ++ AQ+LY MQ ADI+
Sbjct: 121 GSELYEKLGIEYLENIIKISMNTTLNRIKKGITIMGRKQGESISFAQLLYVPMQVADIYS 180
Query: 192 LKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQE------------ 239
L ++ G+DQRK +V+A E D K PI + HH+L G+ +
Sbjct: 181 LNVNLAHGGIDQRKAHVIAIEVSDAFGYK--PIAVHHHLLLGMHIDENIRQKLLEAKKTN 238
Query: 240 ------------KMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIF 287
KMSKS P +AI++ D ++ KI+KAYCP +E NP +E ++Y+I+
Sbjct: 239 NRELFEDSVIDIKMSKSKPETAIFIHDTPEDIRRKIRKAYCPIGEIELNPIIELVEYVIY 298
Query: 288 PWDKKFVVERSEANGGNKTFETMKNL 313
P K+ +V ++ F+ ++ L
Sbjct: 299 PILKEPIVIENKKTHQTMEFDNVEQL 324
>sp|Q8PVK0|SYY_METMA Tyrosine--tRNA ligase OS=Methanosarcina mazei (strain ATCC BAA-159
/ DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=tyrS
PE=3 SV=1
Length = 317
Score = 157 bits (398), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 163/292 (55%), Gaps = 18/292 (6%)
Query: 22 EKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKLTS-- 79
++ L++ +E + E+EL LL KK P Y G+EPSG++H+ ++VNKL
Sbjct: 2 DRLELIKRNVQEIVTEEELEGLLNKKETPRAYVGYEPSGKIHMGH----VLTVNKLIDLQ 57
Query: 80 -AGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSE-EIN 137
AG K+ + +AD A LN K G L++++ + Y +IA+G+ E+ +F++ S+ ++
Sbjct: 58 KAGFKITVLLADVHAYLNRK--GTLEEVRKIADYNRRCFIALGLDEEQTDFVYGSDFQLG 115
Query: 138 ARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLKADIC 197
A EY V+ ++R L R R +GR+ D+ T +Q++YP MQ DI L+ D+
Sbjct: 116 A---EYMLNVLKLSRAVTLNRAKRSMDEVGRA-MDDPTVSQMVYPLMQAIDIALLEVDVA 171
Query: 198 QLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYMEDEEA 257
G+DQRK+++LARE + + PI + +L GL G + S D + I ++D E
Sbjct: 172 VGGIDQRKIHMLARENLKSLGFET-PICIHTPILLGLD-GTKMASSKD--NFISVDDTEE 227
Query: 258 EVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFET 309
E+ K KKA+C VE NP L +Y IFP + V+ER E GGN + +
Sbjct: 228 EIYRKFKKAFCKMGDVEENPILALFRYHIFPRYETIVIERPEKFGGNLVYNS 279
>sp|O27795|SYY_METTH Tyrosine--tRNA ligase OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=tyrS PE=3 SV=1
Length = 319
Score = 157 bits (397), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 151/274 (55%), Gaps = 16/274 (5%)
Query: 33 ECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKL---TSAGCKVKIWVA 89
E I +EL+++L KK +P+ Y G+EPSGR+H+ A++V KL AG +VKI +A
Sbjct: 14 EVITPEELMDVL-KKDEPVVYTGYEPSGRIHLGH----ALTVRKLRELQDAGFRVKILLA 68
Query: 90 DWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEINARADEYWPLVMD 149
D+ A LN K G +++I+ + Y + ++A+G+ ER EF+ S EY LV
Sbjct: 69 DYHAYLNGK--GSMERIRELADYNQKCFLALGLSPERTEFILGSS--FQTEPEYTDLVYR 124
Query: 150 IARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLKADICQLGMDQRKVNVL 209
+A L R R + R +D A+++YP MQ D+ +L D+ GM+QRK+++L
Sbjct: 125 LALITTLLRAKRSMAQITRESRDH-KVAEVIYPLMQVIDMVYLGVDVALGGMEQRKIHML 183
Query: 210 AREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCP 269
ARE + + P+ + +L G G EKMS S + I ++D E+ K+KK+YCP
Sbjct: 184 ARENLPRLGF-DAPVCIHTPLLHG-TDGSEKMSSSK-GNFIAVDDSPDEIREKVKKSYCP 240
Query: 270 PKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGG 303
EGNP +E +KY I P + R E GG
Sbjct: 241 MGETEGNPIIEIVKYFIMPEYGMMTIRRPEKFGG 274
>sp|Q46BQ5|SYY_METBF Tyrosine--tRNA ligase OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=tyrS PE=3 SV=1
Length = 317
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 164/298 (55%), Gaps = 21/298 (7%)
Query: 22 EKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKLTS-- 79
++ L++ +E + E EL LL KK P Y G+EPSG++H+ ++VNKL
Sbjct: 2 DRLDLIKRNVQEIVTEGELEELLNKKKAPRAYVGYEPSGKIHMGH----VLTVNKLIDLQ 57
Query: 80 -AGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSE-EIN 137
AG ++ + +AD A LN K G L++++ + Y +IA+G+ E+ F++ S+ ++
Sbjct: 58 KAGFEITVLLADVHAYLNRK--GTLEEVRKIADYNKRCFIALGLDKEKTNFVYGSDYQLG 115
Query: 138 ARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLKADIC 197
A EY V+ ++R L R R +GR+ D+ T +Q++YP MQ DI L DI
Sbjct: 116 A---EYMLNVLKLSRSVTLNRARRSMDEVGRA-MDDPTVSQMVYPLMQAIDIAMLGVDIA 171
Query: 198 QLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYMEDEEA 257
G+DQRK+++LARE ++ + PI + +L GL + SK + I ++D E
Sbjct: 172 VGGIDQRKIHMLARENLKNLGFET-PICIHTPILLGLDGTKMASSKEN---FISVDDTEE 227
Query: 258 EVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKT---FETMKN 312
E+ K+KKAYC E NP L +Y IFP + V+ER E GGN T +E M+N
Sbjct: 228 EIYRKLKKAYCKIGDTEENPILALFRYHIFPRYETIVIERPEKFGGNITYTSYEEMEN 285
>sp|A5UKJ0|SYY_METS3 Tyrosine--tRNA ligase OS=Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861) GN=tyrS PE=3 SV=1
Length = 319
Score = 155 bits (391), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 161/291 (55%), Gaps = 19/291 (6%)
Query: 18 MSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKL 77
MS+EEK +L+ E I +EL +L KK QPI Y G+EPSG++H+ A++V KL
Sbjct: 1 MSIEEKIQLIEKGTLEVIDTEELKEVL-KKEQPIAYTGYEPSGKIHLGH----AVTVQKL 55
Query: 78 TSA---GCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEF-LWSS 133
+ G K+KI +AD+ A LN K G +++I Y ++ + A+G+ E EF L SS
Sbjct: 56 KTLQKLGFKIKILLADFHAFLNGK--GSIEEIAETAEYNMKCFKALGL-DETTEFILGSS 112
Query: 134 EEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLK 193
++N ++Y V +A L R R + R +++ A ++YP MQ D+ L
Sbjct: 113 FQLN---EDYASKVYKLATLTTLKRARRSMDQVSRHDENP-KVASVVYPIMQTVDMVALD 168
Query: 194 ADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYME 253
D+ GM+QRK+ +LARE + I K P+ + +L GL G KMS S + I ++
Sbjct: 169 VDVALGGMEQRKIQMLARENLEKIDEK-VPVCIHTPLLHGLD-GDAKMSSS-KGNYIAVD 225
Query: 254 DEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGN 304
D E+ KIKK+YCP EGNP +E + ++P + +++R E GG+
Sbjct: 226 DSVEEITKKIKKSYCPQGETEGNPMIEIAETFVYPNQETLLIKRPEKFGGD 276
>sp|Q8TSI1|SYY_METAC Tyrosine--tRNA ligase OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=tyrS PE=3 SV=1
Length = 317
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 162/292 (55%), Gaps = 18/292 (6%)
Query: 22 EKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKLTS-- 79
++ L+R +E + E+EL LL K P Y G+EPSG++H+ ++VNKL
Sbjct: 2 DRLELIRRNVQEIVTEEELEGLLKNKEAPRAYVGYEPSGKIHMGH----VLTVNKLIDLQ 57
Query: 80 -AGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSE-EIN 137
AG K+ + +AD A LN K G L++++ + Y +IA+G+ E+ +F++ S+ ++
Sbjct: 58 KAGFKITVLLADVHAYLNKK--GTLEEVRKIADYNRRCFIALGLDEEQTDFVYGSDFQLG 115
Query: 138 ARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLKADIC 197
A EY V+ ++R L R R +GR+ D+ T +Q++YP MQ DI L+ D+
Sbjct: 116 A---EYMLNVLKLSRAVTLNRAKRSMDEVGRA-MDDPTVSQMVYPLMQAIDIALLEVDVA 171
Query: 198 QLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYMEDEEA 257
G+DQRK+++LARE + + PI + +L GL G + S D + I ++D
Sbjct: 172 VGGIDQRKIHMLARENLKSLGFET-PICIHTPILLGL-DGTKMASSKD--NFISIDDTGE 227
Query: 258 EVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFET 309
++ K KKA+C VE NP L +Y IFP + V+ER E GG+ T+ +
Sbjct: 228 DIYRKFKKAFCKIGDVEENPILALFRYHIFPRYETVVIERPEKFGGDITYHS 279
>sp|Q8TXZ2|SYY_METKA Tyrosine--tRNA ligase OS=Methanopyrus kandleri (strain AV19 / DSM
6324 / JCM 9639 / NBRC 100938) GN=tyrS PE=3 SV=1
Length = 324
Score = 152 bits (385), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/297 (35%), Positives = 167/297 (56%), Gaps = 11/297 (3%)
Query: 18 MSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKL 77
M VEE+ +LV E + E+EL LL +K +P+ Y GFEPSG++H+ ++ ++ L
Sbjct: 1 MDVEERLKLVTRNAVEVVTEEELRQLLEEKEEPVAYVGFEPSGKVHLGHKLVIDKMID-L 59
Query: 78 TSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEIN 137
AG V I +AD A LN K G L++++ + Y ++A+G+ + EF+ SE
Sbjct: 60 QEAGFHVIILLADLHAYLNEK--GTLEEVRELADYNRRCFLAMGLDPNKTEFVLGSE--- 114
Query: 138 ARADEYWPL-VMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLKADI 196
+ DE + L V +AR + R R ++ RSE++ +Q++YP MQ DI L D+
Sbjct: 115 FQLDEDYALDVYRMARHTTMRRARRSMDMIARSEENP-PVSQVVYPLMQALDIVHLNVDL 173
Query: 197 CQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYMEDEE 256
G++QRK+++LAR+ + + P L ++ GL G EKMS S ++ I ++DE
Sbjct: 174 AVGGLEQRKIHMLARDVLPKLG-YDSPTCLHTPIIHGLD-GDEKMSSSK-NNFIAVDDEP 230
Query: 257 AEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFETMKNL 313
+ K++KAYCP + EGNP LE +Y IF + +ER E GG+ T+ + + L
Sbjct: 231 EVIREKLRKAYCPAREAEGNPILEIYRYFIFREYDEVTIERPEKYGGDVTYTSYEEL 287
>sp|Q2NHE1|SYY_METST Tyrosine--tRNA ligase OS=Methanosphaera stadtmanae (strain DSM
3091) GN=tyrS PE=3 SV=1
Length = 318
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/275 (36%), Positives = 149/275 (54%), Gaps = 19/275 (6%)
Query: 33 ECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNK---LTSAGCKVKIWVA 89
E I+ +EL LL KK + Y GFEPSG++H+ A+++ K L AG K+ I++A
Sbjct: 16 EIIEVEELKELL-KKDEKRAYVGFEPSGKVHLGH----ALTIKKMKTLQDAGFKITIFIA 70
Query: 90 DWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEINARADEYWPLVMD 149
+ A LNNK G L ++ V +Y I+ + A+G+ +E F+ S+ + EY V
Sbjct: 71 NLHAYLNNK--GTLDELNEVAKYNIKCFKALGL-SEDTNFILGSDRMTP---EYITEVFK 124
Query: 150 IARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLKADICQLGMDQRKVNVL 209
A+ + R R ++ R+E ++ AQ LYP MQ DI L ADI GM+QRK+++L
Sbjct: 125 AAKLTTIQRAQRSMALVSRNETHDV--AQTLYPIMQALDIHDLDADIAVGGMEQRKIHML 182
Query: 210 AREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCP 269
ARE + + P + H L G +KMS S + I ++D E+ KI K++CP
Sbjct: 183 AREILPRLGYR--PPVCIHIPLIHGTDGSDKMSSS-KGNFIAIDDTPKEIKNKINKSFCP 239
Query: 270 PKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGN 304
+ E NP +E Y IF +K ++ER E GGN
Sbjct: 240 IGVSEDNPVMEIAHYYIFDTHEKILIERPEKFGGN 274
>sp|Q57834|SYY_METJA Tyrosine--tRNA ligase OS=Methanocaldococcus jannaschii (strain ATCC
43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=tyrS PE=1 SV=1
Length = 306
Score = 144 bits (363), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 172/304 (56%), Gaps = 25/304 (8%)
Query: 22 EKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKLTSAG 81
++F +++ E I E+EL +L KK + Y GFEPSG++H+ ++ + L +AG
Sbjct: 2 DEFEMIKRNTSEIISEEELREVL-KKDEKSAYIGFEPSGKIHLGH-YLQIKKMIDLQNAG 59
Query: 82 CKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEINARAD 141
+ I +AD A LN K G+L +I+ +G Y +++ A+G++ + +++ SE + D
Sbjct: 60 FDIIILLADLHAYLNQK--GELDEIRKIGDYNKKVFEAMGLKAK---YVYGSE---FQLD 111
Query: 142 EYWPL-VMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLKADICQLG 200
+ + L V +A + L R R +++ R +++ A+++YP MQ DI +L D+ G
Sbjct: 112 KDYTLNVYRLALKTTLKRARRSMELIAREDENP-KVAEVIYPIMQVNDIHYLGVDVAVGG 170
Query: 201 MDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYMEDEEAEVN 260
M+QRK+++LARE K + + + +L GL G+ KMS S + I ++D E+
Sbjct: 171 MEQRKIHMLARELL-----PKKVVCIHNPVLTGLD-GEGKMS-SSKGNFIAVDDSPEEIR 223
Query: 261 VKIKKAYCPPKIVEGNPCLEYIKYII-FPWDKKFVVERSEANGGNKTFETMKNLLLIMK- 318
KIKKAYCP +VEGNP +E KY + +P ++R E GG+ T + + L + K
Sbjct: 224 AKIKKAYCPAGVVEGNPIMEIAKYFLEYP----LTIKRPEKFGGDLTVNSYEELESLFKN 279
Query: 319 KEIY 322
KE++
Sbjct: 280 KELH 283
>sp|Q8ZW77|SYY2_PYRAE Tyrosine--tRNA ligase 2 OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=tyrS2 PE=3 SV=1
Length = 316
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 152/296 (51%), Gaps = 31/296 (10%)
Query: 25 RLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKLTSAGCKV 84
RL+ ++ EE + +E L L Y GFEP +HI ++ A + +L AG V
Sbjct: 3 RLLMNV-EEVVTREEFLRLKGGS----AYLGFEPLWPIHIGW-LIWAYKLAELKEAGFDV 56
Query: 85 KIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEINARADEYW 144
+ VA W A +N+K G +++++ G + + +G +F + + A+ +YW
Sbjct: 57 IVLVATWHAWINDK--GSIEELRAHGERVRAVLDRIG------KFKYVYGDDVAKDPKYW 108
Query: 145 PLVMDIARRNKLPRIMRCCQIMGR-SEQDELTAAQILYPCMQCADIFFLKADICQLGMDQ 203
LV+ IA+ L R+ R +MGR +E+ EL ++++YP MQ ADIF+L D+ GMDQ
Sbjct: 109 ELVVKIAKETSLARVKRATPVMGRRAEEVELDFSKLMYPLMQVADIFYLGVDVAVGGMDQ 168
Query: 204 RKVNVLAREYCDDIKRKNKPIILSHHMLPGLQ-----QGQE----------KMSKSDPSS 248
R+ ++LAR+ + + K KPI L ++ L +G KMSKS P S
Sbjct: 169 RRAHMLARDVAEKLGLK-KPIALHTPIITSLSGTGRMEGTHREIDEVYAMYKMSKSKPQS 227
Query: 249 AIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGN 304
AI + D E +V KI AYCPP+ + NP E Y++ P+ ++ GN
Sbjct: 228 AILITDSEEDVRKKIWAAYCPPRETKFNPVFEIAAYLLIPYHGPLEIKGRRYEEGN 283
>sp|Q2FNA1|SYY_METHJ Tyrosine--tRNA ligase OS=Methanospirillum hungatei (strain JF-1 /
DSM 864) GN=tyrS PE=3 SV=1
Length = 313
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/286 (34%), Positives = 156/286 (54%), Gaps = 21/286 (7%)
Query: 25 RLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKLTS---AG 81
R++R+ E + DE L L +P Y G+EPSG +H+ +++NKL AG
Sbjct: 6 RVIRNTVE--VVTDEELRSLLDRPVRKVYAGYEPSGEIHLGH----LVTINKLIDLRDAG 59
Query: 82 CKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEINARAD 141
+V + +AD A LN K G +++++ + Y + +G+ T+ L SS +++
Sbjct: 60 FEVTVLLADLHAFLNRK--GTMEEVKKLAEYNRRCFEGLGL-TDIKYVLGSSFQLSP--- 113
Query: 142 EYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLKADICQLGM 201
EY LV ++++ L R R +GR + D T +Q++YP MQ ADI L D G+
Sbjct: 114 EYQILVHELSQAITLNRAKRSMDEVGR-QMDNPTVSQMVYPIMQMADIAMLGVDAALGGI 172
Query: 202 DQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYMEDEEAEVNV 261
DQRK+++LAREY + KN P + H +P LQ K S + I + + E ++
Sbjct: 173 DQRKIHMLAREY---LPSKNYPSPVCIH-VPILQGLDGKKMSSSQGNYISVAESEEDIRK 228
Query: 262 KIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTF 307
K+KKA+CPP+ VE NP L+ +++ IFP +ER E GGN+TF
Sbjct: 229 KMKKAFCPPE-VEDNPVLQVLQHHIFPRLDTVTIERPEKFGGNRTF 273
>sp|Q5V4J1|SYY_HALMA Tyrosine--tRNA ligase OS=Haloarcula marismortui (strain ATCC 43049
/ DSM 3752 / JCM 8966 / VKM B-1809) GN=tyrS PE=3 SV=1
Length = 346
Score = 137 bits (346), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 150/302 (49%), Gaps = 21/302 (6%)
Query: 18 MSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQ-GVMKAISVNK 76
M E+ LV E + EDEL L ++ P Y G+ P+G MHI M+ ++
Sbjct: 1 MDTAERLDLVTRHTTEVVTEDELRTLF-EESDPSAYIGYAPTGEMHIGHFTTMRKLA--D 57
Query: 77 LTSAGCKVKIWVADWFAQLN-NKMGGDLKKIQTVG-RYLIEIWI-AVGMRTERVEFLWSS 133
AG V + +AD A L+ NK DL ++ IE I A G E V F+ +
Sbjct: 58 FLRAGVDVTVLIADLHAHLDDNKSPFDLLDARSAYYETAIEGMIEAAGADPEDVTFVRGT 117
Query: 134 EEINARADEYWPLVM-DIARRNKLPRIMRCC-QIMGRSEQDELTAAQILYPCMQCADIFF 191
+ + DE + L M +A + R R +++ SE L ++YP MQ D+
Sbjct: 118 ---DFQLDEEYTLEMYRMAAETTISRTQRAASEVVRESESPNL--GGLIYPLMQTLDVKA 172
Query: 192 LKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIY 251
L ADI G+DQR + +L+RE D PI L +L GL G KMS SD +S +
Sbjct: 173 LDADIAYGGVDQRGIYMLSREILPD-HGGESPICLFAPLLSGLSGG--KMSASDEASKVN 229
Query: 252 MEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPW----DKKFVVERSEANGGNKTF 307
+ D EV+ KI +AYCP VE N LEY+++++FP FVVER E GG+ T+
Sbjct: 230 LTDSPDEVDEKINQAYCPAGEVEENGVLEYLQHLVFPVLDVRGDSFVVERPEEYGGDLTY 289
Query: 308 ET 309
E+
Sbjct: 290 ES 291
>sp|Q6M0K7|SYY_METMP Tyrosine--tRNA ligase OS=Methanococcus maripaludis (strain S2 / LL)
GN=tyrS PE=3 SV=1
Length = 319
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 156/284 (54%), Gaps = 22/284 (7%)
Query: 33 ECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQ--GVMKAISVNKLTSAGCKVKIWVAD 90
E + +EL LL KK + I Y GFEPSGR+H+ + K I + K AG K+ I +AD
Sbjct: 21 EIVSIEELTELL-KKEEKIAYIGFEPSGRIHMGHYLQIRKMIDLQK---AGFKIVILLAD 76
Query: 91 WFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEINARADEYWPLVMDI 150
A LN K G + +++ +G +++ A+G+ + +++ SE DEY V +
Sbjct: 77 LHAYLNQK--GTMDEVRALGEENRKVFEAMGLVAD---YVYGSE--FQLKDEYTIDVYKL 129
Query: 151 ARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLKADICQLGMDQRKVNVLA 210
A L R R +++ R +++ A ++YP MQ DI L AD+ GM+QRK+++L+
Sbjct: 130 ALSTTLNRARRSMEVIAREDENP-KVASVVYPLMQVNDIKHLNADVAVGGMEQRKIHMLS 188
Query: 211 REYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPP 270
RE + K P+ + + +L GL G+ KMS S + I ++D+EA + K+K A+CP
Sbjct: 189 REILPSMGYK-APVCIHNPVLTGLD-GEGKMSSSK-GNFIAVDDDEATIKKKMKNAFCPM 245
Query: 271 KIVEGNPCLEYIKYII-FPWDKKFVVERSEANGGNKTFETMKNL 313
K V GNP LE KY + +P V+R E GG+ E+ + L
Sbjct: 246 KEVSGNPVLEIAKYYLKYPA----TVKRPEKFGGDLVLESYEAL 285
>sp|Q12W06|SYY_METBU Tyrosine--tRNA ligase OS=Methanococcoides burtonii (strain DSM
6242) GN=tyrS PE=3 SV=1
Length = 317
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 153/286 (53%), Gaps = 16/286 (5%)
Query: 22 EKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKLTS-- 79
E L++ +E + E+EL LL K P Y G+EPSG++H+ ++VNKL
Sbjct: 2 ENMDLIKRNVQEIVTEEELTKLLETKKHPSAYTGYEPSGKIHMGH----VLTVNKLLDLQ 57
Query: 80 -AGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEINA 138
AG ++ + +AD A LN K G + +++ Y + ++A+G+ E F++ S+
Sbjct: 58 KAGFEITVLLADVHAYLNQK--GTMDEVRKTADYNKKCFLALGLDPEMTNFVYGSD--FQ 113
Query: 139 RADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLKADICQ 198
+ EY V+ + + L R R +GR +D +Q++YP MQ DI L D+
Sbjct: 114 LSPEYMLNVLKLTQATSLNRAKRSMDEVGRKMEDP-KVSQMVYPIMQAVDIALLGVDVAV 172
Query: 199 LGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYMEDEEAE 258
G+DQRK+++LARE + K P+ + +L GL KMS S+ + I ++D+EA
Sbjct: 173 GGIDQRKIHMLAREGLPGLGFK-APLCIHTPILLGLDG--TKMSSSN-ENYISVDDDEAA 228
Query: 259 VNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGN 304
+ K KKA+CP + +E NP LE KY I P + V ER E GG+
Sbjct: 229 LKKKFKKAFCPAEDIENNPVLELFKYHITPRYDEMVFERPEKFGGD 274
>sp|A3CYG9|SYY_METMJ Tyrosine--tRNA ligase OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=tyrS PE=3 SV=1
Length = 315
Score = 135 bits (339), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 146/279 (52%), Gaps = 19/279 (6%)
Query: 38 DELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKLTS---AGCKVKIWVADWFAQ 94
DE L L +P Y G+EPSG +H+ ++VNKL AG +V + +AD A
Sbjct: 17 DEELRALIDRPVRRVYTGYEPSGEIHLGH----MVTVNKLMDLQQAGFEVTVLIADLHAF 72
Query: 95 LNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEINARADEYWPLVMDIARRN 154
LN K G +++I+ Y + +G+R L S ++ EY V+++++
Sbjct: 73 LNRK--GTMEEIRETAEYNRRCFEGLGLRGANY-VLGSDVQLTP---EYELAVLELSQAI 126
Query: 155 KLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLKADICQLGMDQRKVNVLAREYC 214
L R R +GR + D T +Q++YP MQ DI L D G+DQRK+++LARE+
Sbjct: 127 TLNRAKRSMDEVGR-QMDNPTVSQMVYPIMQMVDIATLGVDAAVGGIDQRKIHMLAREHL 185
Query: 215 DDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVE 274
I P+ + ++ GL +KMS S + I + D E ++ K+KKA+CPP+ VE
Sbjct: 186 PSIGYP-APVCIHTPIINGLD--GKKMSSS-AGNVISVADSEEDIKKKMKKAFCPPE-VE 240
Query: 275 GNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFETMKNL 313
NP LE ++Y +FP + R E GG++ F ++L
Sbjct: 241 NNPVLEILRYHVFPRAGAVAIRRPEKFGGDREFAAYEDL 279
>sp|Q3IQU8|SYY_NATPD Tyrosine--tRNA ligase OS=Natronomonas pharaonis (strain DSM 2160 /
ATCC 35678) GN=tyrS PE=3 SV=1
Length = 345
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 149/309 (48%), Gaps = 26/309 (8%)
Query: 18 MSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQ-GVMKAISVNK 76
M E+ LV EE I+ DE+ L ++ +P Y G+ P+G MHI M+ ++
Sbjct: 1 MDTVERTDLVARFTEEVIERDEIETLFEEQDEPTAYIGYAPTGEMHIGHFTTMRKLA--D 58
Query: 77 LTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYL---IEIWIAV-GMRTERVEFLWS 132
AG V + VAD A L++ + ++ Y IE IA G + + F+
Sbjct: 59 FIDAGLDVTVLVADLHAHLDDAKS-PFELLEARSEYYERAIEGMIAAAGADPDGISFIRG 117
Query: 133 SEEINARADEYWPLVMDIAR---RNKLPRIMRC-CQIMGRSEQDELTAAQILYPCMQCAD 188
+ + + DE P +D+ R L R R +++ +SE L ++Y MQ D
Sbjct: 118 T---DFQLDE--PYTLDLYRLLADTTLSRAQRAGSEVVRQSENPSL--GSLVYTLMQALD 170
Query: 189 IFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSS 248
+ L ADI G+DQR + +LARE D +KP + +L GL G KMS S+ S
Sbjct: 171 VAALDADIAYGGIDQRGIYMLAREQLPD-HGYDKPACVFAPLLSGLSGG--KMSASEAGS 227
Query: 249 AIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPW----DKKFVVERSEANGGN 304
I + D+ ++ KI AYCP E N LEY++Y++FP D FVVER E GG+
Sbjct: 228 KINLTDDGEAIDEKIGGAYCPAGETEENGVLEYLEYLVFPVFDQRDTSFVVERPEKYGGD 287
Query: 305 KTFETMKNL 313
+ T L
Sbjct: 288 LEYGTYDEL 296
>sp|A2SU89|SYY_METLZ Tyrosine--tRNA ligase OS=Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z) GN=tyrS PE=3 SV=1
Length = 317
Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 150/295 (50%), Gaps = 20/295 (6%)
Query: 22 EKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKLT--- 78
+ + LV E + EDEL LL K P Y G+EPSG +H+ +++NKL
Sbjct: 2 DAYELVTRNTAEIVTEDELRALLNK-PTKRVYTGYEPSGEIHLGH----LVTINKLMDMK 56
Query: 79 SAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEINA 138
+AG V + +A+ A LN K G ++I+ + Y AVG++ EF+ ++
Sbjct: 57 AAGFDVVVLIANLHAYLNRK--GTFEQIKELADYNKACIEAVGLKG--AEFVLGTDV--Q 110
Query: 139 RADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLKADICQ 198
+Y V+ + ++ L R R +GR+ D +Q++YP MQ DI L D
Sbjct: 111 LTPKYQTEVLTLCQQITLNRATRSMDEVGRA-MDNPMVSQMVYPVMQVVDIPTLNVDAAV 169
Query: 199 LGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYMEDEEAE 258
G+DQRK+++LARE+ + K P+ + ++ GL EKMS S + + + D E
Sbjct: 170 GGIDQRKIHMLAREHLPTLGYK-PPVCIHTPIVNGLD--GEKMSSSK-GNVVSVADSPEE 225
Query: 259 VNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFETMKNL 313
+ K+KKA+CPP+ EGNP L+ +Y +FP + R E GG+ F + L
Sbjct: 226 IKKKMKKAFCPPE-TEGNPILQIFRYNVFPRMDTIAIRRPEKFGGDLEFHSYAEL 279
>sp|A6URQ1|SYY_METVS Tyrosine--tRNA ligase OS=Methanococcus vannielii (strain SB / ATCC
35089 / DSM 1224) GN=tyrS PE=3 SV=1
Length = 319
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 157/291 (53%), Gaps = 21/291 (7%)
Query: 17 QMSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQ--GVMKAISV 74
Q+S E + E + +E+ LL K+ + I Y GFEPSG++H+ + K I +
Sbjct: 5 QVSGENMLESILKNTSEIVSIEEMNELLKKEGEKIAYIGFEPSGKIHLGHYLQIKKMIDL 64
Query: 75 NKLTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSE 134
K AG K+ I +AD A LN K G +++I+ +G + + ++G+ + +++ SE
Sbjct: 65 QK---AGFKIIILLADLHAYLNQK--GTMEEIRALGEENKKAFESMGLIAD---YVYGSE 116
Query: 135 -EINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLK 193
++N +EY V +A L R R +++ R +++ A ++YP MQ DI L
Sbjct: 117 FQLN---EEYTIDVYKLALATTLNRAKRSMEVIAREDENP-KVASVVYPLMQVNDIKHLN 172
Query: 194 ADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYME 253
D+ GM+QRK+++L+RE ++ K PI + + +L GL G+ KMS S + I ++
Sbjct: 173 VDVAVGGMEQRKIHMLSREILPNMGYK-APICIHNPILTGL-DGEGKMSSSK-GNLIAVD 229
Query: 254 DEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGN 304
D+E + K+K A+CP K V GNP LE +Y + D + R E GGN
Sbjct: 230 DDEVTIKNKLKNAFCPMKEVFGNPVLEIARYYL---DYPVNINRPEKYGGN 277
>sp|Q9HN62|SYY_HALSA Tyrosine--tRNA ligase OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=tyrS PE=3 SV=1
Length = 327
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 140/267 (52%), Gaps = 15/267 (5%)
Query: 52 CYDGFEPSGRMHIAQGVMKAISVNKLTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGR 111
Y G+EPSG +H+ ++ A + L AG +V + +AD A LN+K G ++I+
Sbjct: 32 VYVGYEPSGVLHLGH-LLTANKLMDLQDAGMEVVVLLADVHAYLNDK--GSFEEIRATAD 88
Query: 112 YLIEIWIAVGMRTERVEFLWSSEEINARADEYWPLVMDIAR-RNKLPRIMRCCQIMGRSE 170
+ ++A G+ ++ EF+ S + + DE + L + + L R R + E
Sbjct: 89 QMKAQFLAYGLDEDQTEFVLGS---SFQLDEDYELDLHAMQVETSLKRAQRAMAEIQSGE 145
Query: 171 QDELTAAQILYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHM 230
+++ ++YP MQ DI +L D+ GMDQRKV++LARE + + +P +L +
Sbjct: 146 TPKVS--HVVYPLMQALDIEYLDLDLAIGGMDQRKVHMLAREELPSVGYEKRP-VLHTPI 202
Query: 231 LPGLQQGQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCP----PKIVEGNPCLEYIKYII 286
+ L G KMS S+ I MED A++ K+ A+CP P+ NP LE +Y +
Sbjct: 203 IGDLGSGDGKMSSSE-GVTISMEDSTADIEEKVTGAFCPQTRDPEGETVNPVLELFQYHV 261
Query: 287 FPWDKKFVVERSEANGGNKTFETMKNL 313
FP + VV+R + GG+ +E+ ++L
Sbjct: 262 FPRFDEVVVQRPDEYGGDLVYESYEDL 288
>sp|B0R7E0|SYY_HALS3 Tyrosine--tRNA ligase OS=Halobacterium salinarum (strain ATCC 29341
/ DSM 671 / R1) GN=tyrS PE=3 SV=1
Length = 327
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 140/267 (52%), Gaps = 15/267 (5%)
Query: 52 CYDGFEPSGRMHIAQGVMKAISVNKLTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGR 111
Y G+EPSG +H+ ++ A + L AG +V + +AD A LN+K G ++I+
Sbjct: 32 VYVGYEPSGVLHLGH-LLTANKLMDLQDAGMEVVVLLADVHAYLNDK--GSFEEIRATAD 88
Query: 112 YLIEIWIAVGMRTERVEFLWSSEEINARADEYWPLVMDIAR-RNKLPRIMRCCQIMGRSE 170
+ ++A G+ ++ EF+ S + + DE + L + + L R R + E
Sbjct: 89 QMKAQFLAYGLDEDQTEFVLGS---SFQLDEDYELDLHAMQVETSLKRAQRAMAEIQSGE 145
Query: 171 QDELTAAQILYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHM 230
+++ ++YP MQ DI +L D+ GMDQRKV++LARE + + +P +L +
Sbjct: 146 TPKVS--HVVYPLMQALDIEYLDLDLAIGGMDQRKVHMLAREELPSVGYEKRP-VLHTPI 202
Query: 231 LPGLQQGQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCP----PKIVEGNPCLEYIKYII 286
+ L G KMS S+ I MED A++ K+ A+CP P+ NP LE +Y +
Sbjct: 203 IGDLGSGDGKMSSSE-GVTISMEDSTADIEEKVTGAFCPQTRDPEGETVNPVLELFQYHV 261
Query: 287 FPWDKKFVVERSEANGGNKTFETMKNL 313
FP + VV+R + GG+ +E+ ++L
Sbjct: 262 FPRFDEVVVQRPDEYGGDLVYESYEDL 288
>sp|B9LTA6|SYY_HALLT Tyrosine--tRNA ligase OS=Halorubrum lacusprofundi (strain ATCC
49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=tyrS PE=3 SV=1
Length = 328
Score = 125 bits (314), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 148/299 (49%), Gaps = 21/299 (7%)
Query: 25 RLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKLTSAGCKV 84
R+ R+ E + E+E+ + Y G+EPSG +HI ++ A + L AG +V
Sbjct: 6 RITRNAAE-VVTEEEIEAMADDPDGKRAYVGYEPSGVLHIGH-MLTANKLIDLQEAGFEV 63
Query: 85 KIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSE-EINARADEY 143
+ +AD A LN+K G ++I+ + + +IA G+ +F+ S+ +++ D+Y
Sbjct: 64 TVLLADVHAYLNDK--GSFEEIRHTAERMRDQFIAYGLDESNTQFVLGSDFQLD---DDY 118
Query: 144 WPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLKADICQLGMDQ 203
+ + L R R + + D + +Q +YP MQ DI +L D+ GM+Q
Sbjct: 119 TLDLHSLELETTLARAERAMAEI--TSGDSVKVSQAVYPLMQALDIPYLGVDLAVGGMEQ 176
Query: 204 RKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYMEDEEAEVNVKI 263
RKV++LAR+ I R+ P L ++ L G+ KMS S+ I MED ++ K+
Sbjct: 177 RKVHMLARDVLPSIDRE-PPTSLHTPLIADLGTGRGKMSSSE-GVTISMEDSREDIESKV 234
Query: 264 KKAYCP----PKIVEG-----NPCLEYIKYIIFPWDKKFVVERSEANGGNKTFETMKNL 313
AYCP P+ + NP L+ +Y +FP VVER E GG+ +++ L
Sbjct: 235 NDAYCPRTADPEPTDDGQSRENPVLQVFEYHVFPRFDTVVVERPEEYGGDLEYDSYDAL 293
>sp|Q7ZX51|SYYC_XENLA Tyrosine--tRNA ligase, cytoplasmic OS=Xenopus laevis GN=yars PE=2
SV=1
Length = 528
Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 159/305 (52%), Gaps = 23/305 (7%)
Query: 18 MSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKL 77
+++E K +L+ +E + ED++ +L ++P I Y G +G+ H+A V + +
Sbjct: 5 LTLEGKAQLITRNLQELLGEDKMKEILKERPLRI-YWGTATTGKPHVAYFVPMS-KIADF 62
Query: 78 TSAGCKVKIWVADWFAQLNN-KMGGDLKKIQTVGRYLIEIWIA----VGMRTERVEFLWS 132
AGC+V I AD A L+N K DL +++T RY ++ A +G+ ER+ F+
Sbjct: 63 LKAGCEVTILFADLHAYLDNMKAPWDLLELRT--RYYEQVIQAMLQSIGVPLERLRFIRG 120
Query: 133 SEEINARADEYWPLVMDIARRNKLPRIMRC----CQIMGRSEQDELTAAQILYPCMQCAD 188
+E + EY +D+ R + + +++ + E L+ +LYP +Q D
Sbjct: 121 TE--FQLSKEY---TLDVYRLSSVVTQHDAKKAGAEVVKQVEHPLLSG--LLYPGLQALD 173
Query: 189 IFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSS 248
+LK D G+DQRK+ A +Y + + I L + M+PGL KMS S+ S
Sbjct: 174 EEYLKVDAQFGGVDQRKIFTFAEKYLPALGYAKR-IHLMNPMVPGLTGA--KMSSSEEES 230
Query: 249 AIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFE 308
I + D A+V K+KKA+C P VE N L ++++++FP +FVV R E GGNKT+
Sbjct: 231 KIDLLDSPADVKKKLKKAFCEPGNVENNGVLSFVRHVLFPLKSEFVVLRDEKFGGNKTYT 290
Query: 309 TMKNL 313
+ L
Sbjct: 291 DFETL 295
>sp|Q6DIJ1|SYYC_XENTR Tyrosine--tRNA ligase, cytoplasmic OS=Xenopus tropicalis GN=yars
PE=2 SV=1
Length = 528
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 158/305 (51%), Gaps = 23/305 (7%)
Query: 18 MSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKL 77
++ E K +L+ +E + ED++ +L ++P I Y G +G+ H+A V + +
Sbjct: 5 LTPEGKAQLITRNLQEVLGEDKMKEILKERPLRI-YWGTATTGKPHVAYFVPMS-KIADF 62
Query: 78 TSAGCKVKIWVADWFAQLNN-KMGGDLKKIQTVGRYLIEIWIA----VGMRTERVEFLWS 132
AGC+V I AD A L+N K DL +++T RY ++ A +G+ ER+ F+
Sbjct: 63 LKAGCEVTILFADLHAYLDNMKAPWDLLELRT--RYYEQVIQAMLQSIGVPLERLRFIRG 120
Query: 133 SEEINARADEYWPLVMDIARRNKLPRIMRC----CQIMGRSEQDELTAAQILYPCMQCAD 188
+E + EY +D+ R + + +++ + E L+ +LYP +Q D
Sbjct: 121 TE--FQLSKEY---TLDVYRLSSVVTQHDAKKAGAEVVKQVEHPLLSG--LLYPGLQALD 173
Query: 189 IFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSS 248
+LK D G+DQRK+ A +Y + + I L + M+PGL KMS S+ S
Sbjct: 174 EEYLKVDAQFGGVDQRKIFTFAEKYLPALGYAKR-IHLMNPMVPGLTGA--KMSSSEEES 230
Query: 249 AIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFE 308
I + D A+V K+KKA+C P +E N L ++++++FP +FVV R E GGNKT+
Sbjct: 231 KIDLLDSPADVKKKLKKAFCEPGNIENNGVLSFVRHVLFPLKSEFVVLRDEKFGGNKTYT 290
Query: 309 TMKNL 313
+ L
Sbjct: 291 DFETL 295
>sp|Q5ZJ08|SYYC_CHICK Tyrosine--tRNA ligase, cytoplasmic OS=Gallus gallus GN=YARS PE=2
SV=1
Length = 527
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 161/311 (51%), Gaps = 27/311 (8%)
Query: 12 STSTPQMSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKA 71
+ S PQ EK++L+ +E + ED+L+ +L ++ I Y G +G+ H+A V +
Sbjct: 3 TASGPQ----EKYQLITRNLQEVLGEDKLMAILKEREVKI-YWGTATTGKPHVAYFVPMS 57
Query: 72 ISVNKLTSAGCKVKIWVADWFAQLNN-KMGGDLKKIQTVGRYLIEIWIA----VGMRTER 126
+ AGC+V I AD A L+N K +L +++T RY + A +G+ E+
Sbjct: 58 -KIADFLKAGCEVTILFADLHAYLDNMKAPWELLELRT--RYYEHVIKAMLESIGVPLEK 114
Query: 127 VEFLWSSEEINARADEYWPLVMDIARRNKLPRIMRC----CQIMGRSEQDELTAAQILYP 182
++F+ ++ + EY +D+ R + + +++ + E L+ +LYP
Sbjct: 115 LKFIRGTD--YQLSKEY---TLDVYRLSSVVTQHDAKKAGAEVVKQVEHPLLSG--LLYP 167
Query: 183 CMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMS 242
+Q D +LK D G+DQRK+ A +Y + + I L + M+PGL KMS
Sbjct: 168 GLQALDEEYLKVDAQFGGVDQRKIFTFAEKYLPSLGYAKR-IHLMNPMVPGLTGS--KMS 224
Query: 243 KSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANG 302
S+ S I + D + +V K+KKA+C P +E N L +IK+++FP +FV+ R E G
Sbjct: 225 SSEEDSKIDLLDRKEDVKKKLKKAFCEPGNIENNGVLSFIKHVLFPLKSEFVILREEKWG 284
Query: 303 GNKTFETMKNL 313
GNKT+ + L
Sbjct: 285 GNKTYTAYETL 295
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,894,024
Number of Sequences: 539616
Number of extensions: 4794162
Number of successful extensions: 10874
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 209
Number of HSP's that attempted gapping in prelim test: 10503
Number of HSP's gapped (non-prelim): 322
length of query: 326
length of database: 191,569,459
effective HSP length: 118
effective length of query: 208
effective length of database: 127,894,771
effective search space: 26602112368
effective search space used: 26602112368
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)