Query 047479
Match_columns 84
No_of_seqs 126 out of 761
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 20:11:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047479.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047479hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ws8_A Mavicyanin; oxidized fo 99.9 1.2E-22 4.2E-27 132.5 2.9 57 22-82 1-57 (109)
2 1jer_A Cucumber stellacyanin; 99.8 7E-22 2.4E-26 133.7 2.2 58 22-82 2-60 (138)
3 1x9u_A Umecyanin; cupredoxin, 99.8 8E-21 2.7E-25 125.1 2.5 55 24-82 2-57 (116)
4 2cbp_A Cucumber basic protein; 99.8 7.3E-20 2.5E-24 116.8 3.2 51 24-82 1-51 (96)
5 1f56_A Plantacyanin; cupredoxi 99.6 1.1E-15 3.8E-20 96.6 4.3 46 24-82 1-46 (91)
6 3iuw_A Activating signal coint 87.1 0.38 1.3E-05 29.5 2.3 16 49-64 36-52 (83)
7 4i1k_A B3 domain-containing tr 79.9 1.4 4.8E-05 29.0 2.9 27 46-72 112-138 (146)
8 1yel_A AT1G16640; CESG, protei 74.5 1.7 5.7E-05 26.5 2.0 24 46-71 73-96 (104)
9 1bxv_A Plastocyanin; copper pr 70.1 3.4 0.00011 23.6 2.5 22 49-70 21-43 (91)
10 1xne_A Hypothetical protein PF 67.0 1.9 6.5E-05 27.6 1.0 14 47-60 31-44 (113)
11 4he6_A Peptidase family U32; u 65.7 4.5 0.00015 23.9 2.5 20 46-65 25-44 (89)
12 2z0t_A Putative uncharacterize 63.3 1.8 6.2E-05 27.5 0.4 12 48-59 31-42 (109)
13 2vb2_X Copper protein, cation 56.5 6 0.0002 23.9 1.9 23 43-65 54-76 (88)
14 2qcp_X Cation efflux system pr 55.1 5.9 0.0002 23.4 1.7 19 46-64 49-67 (80)
15 1pmy_A Pseudoazurin; electron 54.1 7.2 0.00025 24.5 2.1 22 49-70 23-44 (123)
16 1paz_A Pseudoazurin precursor; 53.9 8.2 0.00028 24.2 2.3 22 49-70 23-44 (123)
17 1plc_A Plastocyanin; electron 49.9 11 0.00037 21.9 2.3 24 48-71 18-42 (99)
18 3ef4_A Pseudoazurin, blue copp 48.9 8.7 0.0003 24.4 1.8 23 48-70 23-45 (124)
19 3tu6_A Pseudoazurin (blue copp 48.6 8.9 0.0003 24.4 1.8 23 48-70 24-46 (127)
20 2hzs_I RNA polymerase II media 45.3 0.28 9.5E-06 23.9 -4.4 18 48-65 4-21 (27)
21 2k75_A Uncharacterized protein 44.7 9.4 0.00032 23.4 1.5 29 25-60 41-69 (106)
22 4doo_A Chalcone-flavanone isom 44.0 19 0.00064 24.4 3.0 27 44-70 133-159 (205)
23 1iuz_A Plastocyanin; electron 42.3 17 0.00057 21.2 2.3 22 49-70 20-42 (98)
24 1wid_A DNA-binding protein RAV 40.1 22 0.00075 22.4 2.7 19 46-64 87-105 (130)
25 2plt_A Plastocyanin; electron 40.0 19 0.00065 20.6 2.3 22 49-70 20-42 (98)
26 3erx_A Pseudoazurin; copper pr 39.4 14 0.00049 23.2 1.7 23 48-70 22-44 (123)
27 2cal_A Rusticyanin; iron respi 39.0 17 0.0006 23.5 2.2 23 49-71 63-89 (154)
28 2gim_A Plastocyanin; beta shee 39.0 21 0.00073 20.7 2.4 23 49-71 22-45 (106)
29 2kbn_A Conserved protein; nucl 38.4 19 0.00065 22.0 2.2 31 25-60 38-70 (109)
30 1byp_A Protein (plastocyanin); 37.9 18 0.00061 20.8 1.9 22 49-70 19-41 (99)
31 2vgd_A Enxyn11A; glycoside hyd 37.3 5.3 0.00018 28.4 -0.6 11 43-53 62-72 (218)
32 1b3i_A PETE protein, protein ( 36.7 25 0.00084 20.1 2.4 23 49-71 21-44 (97)
33 2hd9_A UPF0310 protein PH1033; 36.7 12 0.0004 24.4 1.0 24 40-63 24-47 (145)
34 4dny_A Metalloprotease STCE; m 35.9 8.5 0.00029 25.2 0.2 16 49-64 100-115 (126)
35 2l8d_A Lamin-B receptor; DNA b 33.6 36 0.0012 19.9 2.7 27 42-71 17-43 (66)
36 1kdj_A Plastocyanin; electron 33.4 23 0.00077 20.5 1.8 22 49-70 19-41 (102)
37 2z0b_A GDE5, KIAA1434, putativ 32.2 27 0.00091 22.1 2.2 41 23-63 23-75 (131)
38 2l55_A SILB,silver efflux prot 30.7 25 0.00084 20.8 1.7 23 43-65 40-62 (82)
39 2ux6_A Pseudoazurin; type-1 co 30.5 27 0.00093 21.7 1.9 22 49-70 23-44 (122)
40 1pcs_A Plastocyanin; electron 30.4 35 0.0012 19.5 2.3 22 49-70 21-43 (98)
41 2laa_A Beta/alpha-amylase; SBD 30.4 27 0.00093 21.7 1.9 34 32-65 27-66 (104)
42 2x11_B Ephrin-A5; receptor-sig 27.9 20 0.00069 24.6 1.1 58 20-82 28-91 (177)
43 1wjj_A Hypothetical protein F2 27.8 15 0.0005 24.2 0.3 33 25-62 65-98 (145)
44 3udc_A Small-conductance mecha 27.6 22 0.00075 25.1 1.2 14 47-60 125-138 (285)
45 1qhq_A Protein (auracyanin); e 27.5 40 0.0014 20.7 2.4 42 22-71 15-62 (140)
46 4dol_A AT1G53520, 94270-95700, 27.0 39 0.0013 22.9 2.4 23 49-71 146-168 (217)
47 2c3v_A Alpha-amylase G-6; carb 26.8 36 0.0012 21.1 2.0 39 26-65 27-71 (102)
48 2dig_A Lamin-B receptor; tudor 26.8 56 0.0019 19.1 2.7 27 42-71 20-46 (68)
49 2ftc_K 39S ribosomal protein L 26.3 30 0.001 21.5 1.5 13 50-62 3-15 (98)
50 2ov0_A Amicyanin; beta-sandwic 26.1 44 0.0015 19.7 2.3 21 49-69 35-56 (105)
51 3r8s_P 50S ribosomal protein L 25.0 30 0.001 22.2 1.4 14 49-62 17-30 (114)
52 4gb7_A 6-aminohexanoate-dimer 24.4 15 0.00053 26.9 -0.1 11 33-46 46-56 (422)
53 4dok_A Similarity to chalcone- 23.7 54 0.0018 22.5 2.6 20 48-67 135-154 (208)
54 2vv5_A MSCS, small-conductance 23.3 24 0.00083 24.9 0.8 15 46-60 125-139 (286)
55 1ed7_A Chitinase A1, (CHBD-CHI 22.9 23 0.00078 18.5 0.5 16 44-59 1-16 (45)
56 2p5d_A UPF0310 protein mjecl36 22.7 55 0.0019 21.1 2.4 20 41-60 28-47 (147)
57 3czu_B Ephrin-A1; ATP-binding, 22.3 57 0.0019 22.4 2.5 59 19-82 25-90 (182)
58 3v2d_T 50S ribosomal protein L 22.1 36 0.0012 22.7 1.4 14 49-62 20-33 (146)
59 4db5_A Tumor necrosis factor l 21.4 42 0.0015 21.9 1.6 17 49-65 88-104 (125)
60 3es4_A Uncharacterized protein 20.7 48 0.0017 20.8 1.7 28 49-78 82-109 (116)
No 1
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=99.85 E-value=1.2e-22 Score=132.45 Aligned_cols=57 Identities=30% Similarity=0.521 Sum_probs=51.7
Q ss_pred cceEEEecCCCCCcccCCCCcccccCCCceeeCCEEEEeecCCCcceEEeccccchhhhcc
Q 047479 22 AATTYTVGDNAGWTTQGKVDYYSWVDGKEFKVGDTLGESLKLRKNEKFYLQNEKSKRNYLA 82 (84)
Q Consensus 22 ~a~~~~VG~~~gW~~~~~~~Y~~Wa~~~~F~vGD~L~F~Y~~~~~sV~~v~~ev~k~~Y~~ 82 (84)
+|++|+|||+.||++|++.+|++||++++|+|||+|+|+|+++.|+|+| |+|++|++
T Consensus 1 ~a~~~~VG~~~GW~~~~~~~Y~~Wa~~~~F~vGD~LvF~y~~~~hsV~~----V~~~~y~~ 57 (109)
T 1ws8_A 1 MATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQ----VDQEQFKS 57 (109)
T ss_dssp CCCEEETTGGGCSCSSSCCCHHHHHHTSCBCTTCEEEEECCTTTCCEEE----ECHHHHHH
T ss_pred CCcEEEeCCCCCccCCCCcChhHhhcCCcCcCCCEEEEeecCCCceEEE----EChHHCCc
Confidence 4789999999999996668999999999999999999999999999965 58999975
No 2
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=99.83 E-value=7e-22 Score=133.70 Aligned_cols=58 Identities=31% Similarity=0.599 Sum_probs=51.5
Q ss_pred cceEEEecCCCCCcccCC-CCcccccCCCceeeCCEEEEeecCCCcceEEeccccchhhhcc
Q 047479 22 AATTYTVGDNAGWTTQGK-VDYYSWVDGKEFKVGDTLGESLKLRKNEKFYLQNEKSKRNYLA 82 (84)
Q Consensus 22 ~a~~~~VG~~~gW~~~~~-~~Y~~Wa~~~~F~vGD~L~F~Y~~~~~sV~~v~~ev~k~~Y~~ 82 (84)
+|++|+|||+.||+++++ .+|++||++|+|+|||+|+|+|.++.|+|+||. +|++|++
T Consensus 2 ~a~~~~VGg~~GW~~~~~~~~Y~~Wa~~~~F~vGD~LvF~y~~~~HsV~~V~---~~~~y~~ 60 (138)
T 1jer_A 2 QSTVHIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEME---TKQSFDA 60 (138)
T ss_dssp CCCEEETTGGGCSSCCSSTTHHHHHHHTCCEETTCEEEECCCTTTCCCEEES---CHHHHHH
T ss_pred CceEEEECCcCcCcCCCCccchhhhhcCCcCcCCCEEEEeecCCCceEEEeC---chhhcCc
Confidence 578999999999999543 689999999999999999999999999996542 8999975
No 3
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=99.80 E-value=8e-21 Score=125.09 Aligned_cols=55 Identities=25% Similarity=0.500 Sum_probs=49.6
Q ss_pred eEEEecCCCCCccc-CCCCcccccCCCceeeCCEEEEeecCCCcceEEeccccchhhhcc
Q 047479 24 TTYTVGDNAGWTTQ-GKVDYYSWVDGKEFKVGDTLGESLKLRKNEKFYLQNEKSKRNYLA 82 (84)
Q Consensus 24 ~~~~VG~~~gW~~~-~~~~Y~~Wa~~~~F~vGD~L~F~Y~~~~~sV~~v~~ev~k~~Y~~ 82 (84)
++|+|||+.||++| ++.+|++|+++++|+|||+|+|+|.++.|+|+| |+|++|++
T Consensus 2 ~~~~VG~~~GW~~~~~~~~Y~~Wa~~~~f~vGD~L~F~y~~~~HsV~~----V~~~~y~~ 57 (116)
T 1x9u_A 2 EDYDVGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAV----VTKDAFDN 57 (116)
T ss_dssp CEEETTGGGCSSCCSSTTHHHHHHTTCCEETTCEEEECCCTTTCCEEE----ECHHHHHT
T ss_pred eEEEECCcCcCcCCCCCcchhhccccccCcCCCEEEEEecCCCCeEEE----EChhhcCc
Confidence 57999999999986 356899999999999999999999999999965 58999986
No 4
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1
Probab=99.78 E-value=7.3e-20 Score=116.81 Aligned_cols=51 Identities=27% Similarity=0.530 Sum_probs=46.3
Q ss_pred eEEEecCCCCCcccCCCCcccccCCCceeeCCEEEEeecCCCcceEEeccccchhhhcc
Q 047479 24 TTYTVGDNAGWTTQGKVDYYSWVDGKEFKVGDTLGESLKLRKNEKFYLQNEKSKRNYLA 82 (84)
Q Consensus 24 ~~~~VG~~~gW~~~~~~~Y~~Wa~~~~F~vGD~L~F~Y~~~~~sV~~v~~ev~k~~Y~~ 82 (84)
++|+|||+.||++ +|++||++++|++||+|+|+|+++.|+|+| |+|++|++
T Consensus 1 ~~~~VG~~~GW~~----~y~~Wa~~~~f~vGD~L~F~y~~~~hsV~~----v~~~~y~~ 51 (96)
T 2cbp_A 1 AVYVVGGSGGWTF----NTESWPKGKRFRAGDILLFNYNPSMHNVVV----VNQGGFST 51 (96)
T ss_dssp CEEETTGGGCSCS----SCTTTTTTCCBCTTCEEEEECCTTTCCEEE----ECHHHHHH
T ss_pred CEEEECCcCCCcc----ChhhhccCceEcCCCEEEEEecCCCCEEEE----ECHHHCCc
Confidence 4799999999997 499999999999999999999999999965 58999975
No 5
>1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1
Probab=99.58 E-value=1.1e-15 Score=96.60 Aligned_cols=46 Identities=24% Similarity=0.450 Sum_probs=41.2
Q ss_pred eEEEecCCCCCcccCCCCcccccCCCceeeCCEEEEeecCCCcceEEeccccchhhhcc
Q 047479 24 TTYTVGDNAGWTTQGKVDYYSWVDGKEFKVGDTLGESLKLRKNEKFYLQNEKSKRNYLA 82 (84)
Q Consensus 24 ~~~~VG~~~gW~~~~~~~Y~~Wa~~~~F~vGD~L~F~Y~~~~~sV~~v~~ev~k~~Y~~ 82 (84)
++|+| ||++ + ++|+++++|++||+|+|+|.++.|+|+| |+|++|++
T Consensus 1 ~~y~V----gW~~--~---~~Wa~~~~f~vGD~L~F~y~~~~hsV~~----v~~~~y~~ 46 (91)
T 1f56_A 1 AVYNI----GWSF--N---VNGARGKSFRAGDVLVFKYIKGQHNVVA----VNGRGYAS 46 (91)
T ss_dssp CEEEE----ECSS--S---CBSCTTCCBCTTCEEEEECCBTTBCEEE----ECHHHHHT
T ss_pred CEEEE----eCCC--C---CcCcCCccEeCCCEEEEEccCCCCeEEE----ECHHHcCC
Confidence 46899 8998 3 8999999999999999999999999965 58999975
No 6
>3iuw_A Activating signal cointegrator; NP_814290.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.58A {Enterococcus faecalis V583}
Probab=87.09 E-value=0.38 Score=29.54 Aligned_cols=16 Identities=31% Similarity=0.370 Sum_probs=12.5
Q ss_pred CceeeCCEEEEe-ecCC
Q 047479 49 KEFKVGDTLGES-LKLR 64 (84)
Q Consensus 49 ~~F~vGD~L~F~-Y~~~ 64 (84)
+.|++||.|.|. |+++
T Consensus 36 r~~~vGD~l~l~E~~~g 52 (83)
T 3iuw_A 36 RNFQVGDILILEEYMNG 52 (83)
T ss_dssp SCCCTTCEEEEEEEETT
T ss_pred cCCCCCCEEEEEEccCC
Confidence 459999999995 6544
No 7
>4i1k_A B3 domain-containing transcription factor VRN1; B3 domain beta-barrel, DNA binding protein; 1.60A {Arabidopsis thaliana}
Probab=79.92 E-value=1.4 Score=28.97 Aligned_cols=27 Identities=11% Similarity=-0.007 Sum_probs=21.3
Q ss_pred cCCCceeeCCEEEEeecCCCcceEEec
Q 047479 46 VDGKEFKVGDTLGESLKLRKNEKFYLQ 72 (84)
Q Consensus 46 a~~~~F~vGD~L~F~Y~~~~~sV~~v~ 72 (84)
+..+..++||.++|.+.....-+++|.
T Consensus 112 v~dn~L~~GD~cvFeli~~~~~~f~V~ 138 (146)
T 4i1k_A 112 TLENNLGEGDVCVFELLRTRDFVLKVT 138 (146)
T ss_dssp HHHTTCCTTCEEEEEECSSSSCEEEEE
T ss_pred HHHcCCCCCCEEEEEEecCCceEEEEE
Confidence 567899999999999987654566664
No 8
>1yel_A AT1G16640; CESG, protein structure initiative, structural genomics, center for eukaryotic structural genomics, unknown function; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=74.48 E-value=1.7 Score=26.55 Aligned_cols=24 Identities=21% Similarity=0.329 Sum_probs=18.8
Q ss_pred cCCCceeeCCEEEEeecCCCcceEEe
Q 047479 46 VDGKEFKVGDTLGESLKLRKNEKFYL 71 (84)
Q Consensus 46 a~~~~F~vGD~L~F~Y~~~~~sV~~v 71 (84)
+..+..++||.|+|+|... +.+.|
T Consensus 73 v~~~~L~~GD~lvF~~~~~--~~f~V 96 (104)
T 1yel_A 73 VKDNNLEDGKYLQFIYDRD--RTFYV 96 (104)
T ss_dssp HHHHTCCTTCEEEEEECSS--SEEEE
T ss_pred HHHcCCCCCCEEEEEEcCC--CeEEE
Confidence 5678999999999999754 44554
No 9
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=70.11 E-value=3.4 Score=23.58 Aligned_cols=22 Identities=18% Similarity=0.113 Sum_probs=17.7
Q ss_pred CceeeCCEEEEeecC-CCcceEE
Q 047479 49 KEFKVGDTLGESLKL-RKNEKFY 70 (84)
Q Consensus 49 ~~F~vGD~L~F~Y~~-~~~sV~~ 70 (84)
.++++||++.|++.. ..|+|..
T Consensus 21 i~v~~Gd~V~~~n~~~~~H~v~~ 43 (91)
T 1bxv_A 21 IEIQAGDTVQWVNNKLAPHNVVV 43 (91)
T ss_dssp EEECTTCEEEEEECSSCCEEEEE
T ss_pred EEECCCCEEEEEECCCCCcEEEE
Confidence 479999999999864 5688764
No 10
>1xne_A Hypothetical protein PF0469; GFT structural genomics, protein structure initiative, NESG, PFR14, alpha and beta protein; NMR {Pyrococcus furiosus} SCOP: b.122.1.6
Probab=67.04 E-value=1.9 Score=27.58 Aligned_cols=14 Identities=29% Similarity=0.271 Sum_probs=11.4
Q ss_pred CCCceeeCCEEEEe
Q 047479 47 DGKEFKVGDTLGES 60 (84)
Q Consensus 47 ~~~~F~vGD~L~F~ 60 (84)
..+.+++||.|+|+
T Consensus 31 ~~~~i~vGD~I~f~ 44 (113)
T 1xne_A 31 QLKDIKRGDKIIFN 44 (113)
T ss_dssp TTTTCCTTCEEEET
T ss_pred hhhccCCCCEEEEc
Confidence 34678999999994
No 11
>4he6_A Peptidase family U32; ultra-tight crystal packing, unknown function; 1.10A {Geobacillus thermoleovorans} PDB: 4he5_A
Probab=65.70 E-value=4.5 Score=23.92 Aligned_cols=20 Identities=15% Similarity=0.069 Sum_probs=16.3
Q ss_pred cCCCceeeCCEEEEeecCCC
Q 047479 46 VDGKEFKVGDTLGESLKLRK 65 (84)
Q Consensus 46 a~~~~F~vGD~L~F~Y~~~~ 65 (84)
..+++|.+||.|.+--+.+.
T Consensus 25 e~rN~f~~GD~iEi~~P~g~ 44 (89)
T 4he6_A 25 QQRNHFRPGDEVEFFGPEIE 44 (89)
T ss_dssp EESSCBCTTCEEEEESTTSC
T ss_pred EEcCCcCCCCEEEEEcCCCC
Confidence 45899999999998876653
No 12
>2z0t_A Putative uncharacterized protein PH0355; alpha/beta protein, RNA binding protein, structural genomics, NPPSFA; 1.80A {Pyrococcus horikoshii} PDB: 1s04_A
Probab=63.34 E-value=1.8 Score=27.53 Aligned_cols=12 Identities=25% Similarity=0.304 Sum_probs=10.6
Q ss_pred CCceeeCCEEEE
Q 047479 48 GKEFKVGDTLGE 59 (84)
Q Consensus 48 ~~~F~vGD~L~F 59 (84)
.+++++||.|.|
T Consensus 31 ~~~ikvGD~I~f 42 (109)
T 2z0t_A 31 RRQIKPGDIIIF 42 (109)
T ss_dssp GGGCCTTCEEEE
T ss_pred hhcCCCCCEEEE
Confidence 457899999999
No 13
>2vb2_X Copper protein, cation efflux system protein CUSF; cation PI, metal-binding, metal transport, copper tolerance, transport; 1.70A {Escherichia coli} PDB: 2vb3_X
Probab=56.54 E-value=6 Score=23.87 Aligned_cols=23 Identities=17% Similarity=0.154 Sum_probs=17.2
Q ss_pred ccccCCCceeeCCEEEEeecCCC
Q 047479 43 YSWVDGKEFKVGDTLGESLKLRK 65 (84)
Q Consensus 43 ~~Wa~~~~F~vGD~L~F~Y~~~~ 65 (84)
.+.+.-..+++||.+.|.+....
T Consensus 54 ~~~~~l~~lk~Gd~V~F~~~~~~ 76 (88)
T 2vb2_X 54 TPQTKMSEIKTGDKVAFNFVQQG 76 (88)
T ss_dssp CTTCEECCCCTTCEEEEEEEEET
T ss_pred CChhhhhcCCCCCEEEEEEEEeC
Confidence 34444578999999999997543
No 14
>2qcp_X Cation efflux system protein CUSF; silver-binding, copper-binding, beta barrel, OB-fold, metall metal resistance, metal-binding; 1.00A {Escherichia coli str} PDB: 1zeq_X 3e6z_X
Probab=55.09 E-value=5.9 Score=23.43 Aligned_cols=19 Identities=21% Similarity=0.279 Sum_probs=15.3
Q ss_pred cCCCceeeCCEEEEeecCC
Q 047479 46 VDGKEFKVGDTLGESLKLR 64 (84)
Q Consensus 46 a~~~~F~vGD~L~F~Y~~~ 64 (84)
+.-..|++||.+.|.+...
T Consensus 49 ~~l~~lk~Gd~V~F~~~~~ 67 (80)
T 2qcp_X 49 TKMSEIKTGDKVAFNFVQQ 67 (80)
T ss_dssp CEECCCCTTCEEEEEEEEE
T ss_pred hhhhcCCCCCEEEEEEEEe
Confidence 3347899999999999754
No 15
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=54.07 E-value=7.2 Score=24.51 Aligned_cols=22 Identities=14% Similarity=0.012 Sum_probs=17.8
Q ss_pred CceeeCCEEEEeecCCCcceEE
Q 047479 49 KEFKVGDTLGESLKLRKNEKFY 70 (84)
Q Consensus 49 ~~F~vGD~L~F~Y~~~~~sV~~ 70 (84)
-++.+||++.|......|+|..
T Consensus 23 i~V~~GdtV~f~n~~~~H~v~~ 44 (123)
T 1pmy_A 23 VRLKPGDSIKFLPTDKGHNVET 44 (123)
T ss_dssp EEECTTCEEEEECSSSSCCCEE
T ss_pred EEECCCCEEEEEECCCCcEEEE
Confidence 4678999999998776788764
No 16
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=53.90 E-value=8.2 Score=24.24 Aligned_cols=22 Identities=14% Similarity=-0.106 Sum_probs=17.9
Q ss_pred CceeeCCEEEEeecCCCcceEE
Q 047479 49 KEFKVGDTLGESLKLRKNEKFY 70 (84)
Q Consensus 49 ~~F~vGD~L~F~Y~~~~~sV~~ 70 (84)
-++++||++.|......|+|..
T Consensus 23 i~V~~GdtV~f~~~~~~H~v~~ 44 (123)
T 1paz_A 23 IKANPGDTVTFIPVDKGHNVES 44 (123)
T ss_dssp EEECTTCEEEEEESSSSCCCEE
T ss_pred EEECCCCEEEEEECCCCeEEEE
Confidence 4788999999999776788754
No 17
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=49.92 E-value=11 Score=21.90 Aligned_cols=24 Identities=4% Similarity=-0.043 Sum_probs=18.1
Q ss_pred CCceeeCCEEEEeecCC-CcceEEe
Q 047479 48 GKEFKVGDTLGESLKLR-KNEKFYL 71 (84)
Q Consensus 48 ~~~F~vGD~L~F~Y~~~-~~sV~~v 71 (84)
.-++++||++.|+.... .|++...
T Consensus 18 ~i~v~~G~tV~~~n~~~~~H~v~~~ 42 (99)
T 1plc_A 18 EFSISPGEKIVFKNNAGFPHNIVFD 42 (99)
T ss_dssp EEEECTTCEEEEEECSSCCBCCEEC
T ss_pred EEEECCCCEEEEEECCCCceEEEEe
Confidence 35788999999987664 6887543
No 18
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=48.91 E-value=8.7 Score=24.44 Aligned_cols=23 Identities=13% Similarity=-0.029 Sum_probs=18.7
Q ss_pred CCceeeCCEEEEeecCCCcceEE
Q 047479 48 GKEFKVGDTLGESLKLRKNEKFY 70 (84)
Q Consensus 48 ~~~F~vGD~L~F~Y~~~~~sV~~ 70 (84)
.-+.++||++.|......|+|..
T Consensus 23 ~i~V~~GDTV~f~n~~~~Hnv~~ 45 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPTDKSHNAES 45 (124)
T ss_dssp EEEECTTCEEEEECSSSSCCCEE
T ss_pred EEEECCCCEEEEEECCCCccEEE
Confidence 34678999999999877888854
No 19
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=48.55 E-value=8.9 Score=24.38 Aligned_cols=23 Identities=17% Similarity=0.024 Sum_probs=18.3
Q ss_pred CCceeeCCEEEEeecCCCcceEE
Q 047479 48 GKEFKVGDTLGESLKLRKNEKFY 70 (84)
Q Consensus 48 ~~~F~vGD~L~F~Y~~~~~sV~~ 70 (84)
.-+.++||++.|......|+|..
T Consensus 24 ~i~V~~GDtVtf~n~~~~H~v~~ 46 (127)
T 3tu6_A 24 VIRAQPGDTVTFVAKDKGHNSAL 46 (127)
T ss_dssp EEEECTTCEEEEECSSSSCCCEE
T ss_pred EEEECCCCEEEEEECCCCceEEE
Confidence 34788999999999776788753
No 20
>2hzs_I RNA polymerase II mediator complex subunit 8; beta barrel, channel, helix, transcription; 2.70A {Saccharomyces cerevisiae}
Probab=45.33 E-value=0.28 Score=23.93 Aligned_cols=18 Identities=33% Similarity=0.388 Sum_probs=13.2
Q ss_pred CCceeeCCEEEEeecCCC
Q 047479 48 GKEFKVGDTLGESLKLRK 65 (84)
Q Consensus 48 ~~~F~vGD~L~F~Y~~~~ 65 (84)
+|+|.|.|.|-|.|....
T Consensus 4 skpfnvddvlkftftgek 21 (27)
T 2hzs_I 4 SKPFNVDDVLKFTFTGEK 21 (27)
T ss_dssp --CCCHHHHHHHHHHCCC
T ss_pred CCCcChhheEEEEecccc
Confidence 478999999999986543
No 21
>2k75_A Uncharacterized protein TA0387; closed beta barrel, OB fold, structural genomics, PSI-2, protein structure initiative; NMR {Thermoplasma acidophilum}
Probab=44.71 E-value=9.4 Score=23.37 Aligned_cols=29 Identities=10% Similarity=0.083 Sum_probs=23.5
Q ss_pred EEEecCCCCCcccCCCCcccccCCCceeeCCEEEEe
Q 047479 25 TYTVGDNAGWTTQGKVDYYSWVDGKEFKVGDTLGES 60 (84)
Q Consensus 25 ~~~VG~~~gW~~~~~~~Y~~Wa~~~~F~vGD~L~F~ 60 (84)
+.++||+.| .+ ..+-|... |..||.+.++
T Consensus 41 ~~~l~DeTG-~I----~~tlW~~~--l~~Gdvv~i~ 69 (106)
T 2k75_A 41 QGYIEDDTA-RI----RISSFGKQ--LQDSDVVRID 69 (106)
T ss_dssp EEEEECSSC-EE----EEEEESSC--CCTTEEEEEE
T ss_pred EEEEEcCCC-eE----EEEEEcCc--cCCCCEEEEE
Confidence 467888888 33 57888777 9999999998
No 22
>4doo_A Chalcone-flavanone isomerase family protein; chalcone-isomerase like fold, fatty-acid binding; HET: DAO; 1.90A {Arabidopsis thaliana}
Probab=43.98 E-value=19 Score=24.40 Aligned_cols=27 Identities=7% Similarity=-0.060 Sum_probs=20.0
Q ss_pred cccCCCceeeCCEEEEeecCCCcceEE
Q 047479 44 SWVDGKEFKVGDTLGESLKLRKNEKFY 70 (84)
Q Consensus 44 ~Wa~~~~F~vGD~L~F~Y~~~~~sV~~ 70 (84)
-|....+|..||.|.|.|.++..-.+.
T Consensus 133 ~F~~~~~~~kGd~i~~~~~p~~~l~~~ 159 (205)
T 4doo_A 133 LFKDEYKIPRNSTIDLTKDPGHVLSVA 159 (205)
T ss_dssp GGTTCCCCCTTCEEEEEEETTTEEEEE
T ss_pred HhccCCCCCCCCEEEEEEcCCCcEEEE
Confidence 355566899999999999987544333
No 23
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=42.28 E-value=17 Score=21.17 Aligned_cols=22 Identities=5% Similarity=0.046 Sum_probs=16.9
Q ss_pred CceeeCCEEEEeecC-CCcceEE
Q 047479 49 KEFKVGDTLGESLKL-RKNEKFY 70 (84)
Q Consensus 49 ~~F~vGD~L~F~Y~~-~~~sV~~ 70 (84)
-+.++||++.|.... ..|+|..
T Consensus 20 i~v~~GdtV~~~n~~~~~H~v~~ 42 (98)
T 1iuz_A 20 ISVAAGEAIEFVNNAGFPHNIVF 42 (98)
T ss_dssp EEECTTCEEEEEECSSCCEEEEE
T ss_pred EEECCCCEEEEEECCCCCEEEEE
Confidence 467889999998765 3788754
No 24
>1wid_A DNA-binding protein RAV1; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=40.11 E-value=22 Score=22.45 Aligned_cols=19 Identities=26% Similarity=0.312 Sum_probs=16.1
Q ss_pred cCCCceeeCCEEEEeecCC
Q 047479 46 VDGKEFKVGDTLGESLKLR 64 (84)
Q Consensus 46 a~~~~F~vGD~L~F~Y~~~ 64 (84)
+..+..+.||.++|.....
T Consensus 87 V~~~~L~~GD~~~F~~~~~ 105 (130)
T 1wid_A 87 VKEKNLRAGDVVSFSRSNG 105 (130)
T ss_dssp HHHTTCCTTCEEEEEECCS
T ss_pred HHHcCCCCCCEEEEEEecC
Confidence 5678899999999998764
No 25
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=40.03 E-value=19 Score=20.62 Aligned_cols=22 Identities=14% Similarity=0.158 Sum_probs=16.8
Q ss_pred CceeeCCEEEEeecCC-CcceEE
Q 047479 49 KEFKVGDTLGESLKLR-KNEKFY 70 (84)
Q Consensus 49 ~~F~vGD~L~F~Y~~~-~~sV~~ 70 (84)
-+.++||++.|+.... .|++..
T Consensus 20 i~v~~G~~V~~~n~~~~~H~~~~ 42 (98)
T 2plt_A 20 LTIKSGETVNFVNNAGFPHNIVF 42 (98)
T ss_dssp EEECTTCEEEEEECSSCCEEEEE
T ss_pred EEECCCCEEEEEECCCCceEEEE
Confidence 4688999999987654 677754
No 26
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=39.37 E-value=14 Score=23.21 Aligned_cols=23 Identities=9% Similarity=-0.126 Sum_probs=18.2
Q ss_pred CCceeeCCEEEEeecCCCcceEE
Q 047479 48 GKEFKVGDTLGESLKLRKNEKFY 70 (84)
Q Consensus 48 ~~~F~vGD~L~F~Y~~~~~sV~~ 70 (84)
.-+.++||++.|......|+|..
T Consensus 22 ~i~V~~GdtV~f~~~~~~H~v~~ 44 (123)
T 3erx_A 22 FVRAEPGDVINFVPTDKSHNVEA 44 (123)
T ss_dssp EEEECTTEEEEEEESSTTCCCEE
T ss_pred EEEECCCCEEEEEECCCCceEEE
Confidence 34688999999999776788753
No 27
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=39.03 E-value=17 Score=23.47 Aligned_cols=23 Identities=13% Similarity=-0.005 Sum_probs=17.6
Q ss_pred CceeeCCEEEEeecCC----CcceEEe
Q 047479 49 KEFKVGDTLGESLKLR----KNEKFYL 71 (84)
Q Consensus 49 ~~F~vGD~L~F~Y~~~----~~sV~~v 71 (84)
-++++||++.|++.+. .|++..+
T Consensus 63 i~V~~GD~V~~~~tN~~~~~~H~~~i~ 89 (154)
T 2cal_A 63 LEIPAGATVDVTFINTNKGFGHSFDIT 89 (154)
T ss_dssp EEECTTCEEEEEEEECCTTCCCCCEEE
T ss_pred EEEeCCCEEEEEEEcCCCCeeeEEEEe
Confidence 4778999999999642 5777665
No 28
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=38.95 E-value=21 Score=20.71 Aligned_cols=23 Identities=17% Similarity=0.072 Sum_probs=17.2
Q ss_pred CceeeCCEEEEeecC-CCcceEEe
Q 047479 49 KEFKVGDTLGESLKL-RKNEKFYL 71 (84)
Q Consensus 49 ~~F~vGD~L~F~Y~~-~~~sV~~v 71 (84)
-++++||++.|.... ..|++...
T Consensus 22 i~v~~Gd~V~~~n~~~~~H~~~~~ 45 (106)
T 2gim_A 22 LTIKPGDTVEFLNNKVPPHNVVFD 45 (106)
T ss_dssp EEECTTCEEEEEECSSSCCCBEEC
T ss_pred EEECCCCEEEEEECCCCCceEEEe
Confidence 478899999999765 46777543
No 29
>2kbn_A Conserved protein; nucleic acid binding protein, beta barrel, structural genomics, PSI-2, protein structure initiative; NMR {Methanosarcina mazei} PDB: 2ken_A
Probab=38.44 E-value=19 Score=22.01 Aligned_cols=31 Identities=16% Similarity=0.354 Sum_probs=24.1
Q ss_pred EEEecCCCCCcccCCCCccccc--CCCceeeCCEEEEe
Q 047479 25 TYTVGDNAGWTTQGKVDYYSWV--DGKEFKVGDTLGES 60 (84)
Q Consensus 25 ~~~VG~~~gW~~~~~~~Y~~Wa--~~~~F~vGD~L~F~ 60 (84)
.-++||+.| . ..++.|. ....|..||++.++
T Consensus 38 ~~~l~DeTG-~----I~~t~W~~~~~~~~~~G~~V~i~ 70 (109)
T 2kbn_A 38 VGLLGDETG-I----IKFTIWKNAELPLLEQGESYLLR 70 (109)
T ss_dssp EEEEECTTC-C----EEEEEEGGGCCCCCCTTCEEEEE
T ss_pred EEEEECCCC-e----EEEEEECcccccccCCCCEEEEE
Confidence 457889888 2 3578887 44699999999998
No 30
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=37.89 E-value=18 Score=20.85 Aligned_cols=22 Identities=5% Similarity=0.149 Sum_probs=16.9
Q ss_pred CceeeCCEEEEeecCC-CcceEE
Q 047479 49 KEFKVGDTLGESLKLR-KNEKFY 70 (84)
Q Consensus 49 ~~F~vGD~L~F~Y~~~-~~sV~~ 70 (84)
-++++||++.|+.... .|++..
T Consensus 19 i~v~~G~tV~~~n~~~~~H~~~~ 41 (99)
T 1byp_A 19 LSIASGEKITFKNNAGFPHNDLF 41 (99)
T ss_dssp EEECTTEEEEEEECSSCCBCCEE
T ss_pred EEECCCCEEEEEECCCCcceEEE
Confidence 3688999999987654 688754
No 31
>2vgd_A Enxyn11A; glycoside hydrolase, xylanase, beta jelly roll, hydrolase; HET: XYP FX3; 1.8A {Escherichia coli} PDB: 2vuj_A 2vul_A*
Probab=37.34 E-value=5.3 Score=28.43 Aligned_cols=11 Identities=9% Similarity=0.247 Sum_probs=5.3
Q ss_pred ccccCCCceee
Q 047479 43 YSWVDGKEFKV 53 (84)
Q Consensus 43 ~~Wa~~~~F~v 53 (84)
..|.....|..
T Consensus 62 ~~W~n~gnfv~ 72 (218)
T 2vgd_A 62 SNWSGINNWVG 72 (218)
T ss_dssp EEEESCSEEEE
T ss_pred EEEcCCCcEEe
Confidence 34555545543
No 32
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=36.73 E-value=25 Score=20.13 Aligned_cols=23 Identities=13% Similarity=0.170 Sum_probs=17.2
Q ss_pred CceeeCCEEEEeecC-CCcceEEe
Q 047479 49 KEFKVGDTLGESLKL-RKNEKFYL 71 (84)
Q Consensus 49 ~~F~vGD~L~F~Y~~-~~~sV~~v 71 (84)
-++++||++.|.... ..|++...
T Consensus 21 i~v~~G~~V~~~n~~~~~H~~~~~ 44 (97)
T 1b3i_A 21 LSISAGDTVEFVMNKVGPHNVIFD 44 (97)
T ss_dssp EEECTTCEEEEEECSSCCCCBEEE
T ss_pred EEECCCCEEEEEECCCCCeEEEEe
Confidence 478899999999765 36787543
No 33
>2hd9_A UPF0310 protein PH1033; pyrococcus horikoshii OT3, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: CIT; 1.35A {Pyrococcus horikoshii} SCOP: b.122.1.8 PDB: 1wmm_A* 2zbn_A
Probab=36.70 E-value=12 Score=24.39 Aligned_cols=24 Identities=21% Similarity=0.011 Sum_probs=19.8
Q ss_pred CCcccccCCCceeeCCEEEEeecC
Q 047479 40 VDYYSWVDGKEFKVGDTLGESLKL 63 (84)
Q Consensus 40 ~~Y~~Wa~~~~F~vGD~L~F~Y~~ 63 (84)
.||.+-..-++.++||.+.|-...
T Consensus 24 Vn~~arn~lr~mk~GD~~~fYhs~ 47 (145)
T 2hd9_A 24 VPKKHKNTLSRVKPGDKLVIYVRQ 47 (145)
T ss_dssp ECGGGHHHHTTCCTTCEEEEEECC
T ss_pred cCHHHHHHHHhCCCCCEEEEEEcc
Confidence 478888777899999999998764
No 34
>4dny_A Metalloprotease STCE; metzincin, bacterial zinc metalloprotease, O-linked glycoPro hydrolase; 1.61A {Escherichia coli}
Probab=35.92 E-value=8.5 Score=25.19 Aligned_cols=16 Identities=25% Similarity=0.108 Sum_probs=13.3
Q ss_pred CceeeCCEEEEeecCC
Q 047479 49 KEFKVGDTLGESLKLR 64 (84)
Q Consensus 49 ~~F~vGD~L~F~Y~~~ 64 (84)
.++.-||++.|+|..+
T Consensus 100 vtl~rG~t~~F~y~~g 115 (126)
T 4dny_A 100 VTLSVGNTLLFKYVNG 115 (126)
T ss_dssp EEECTTCEEEEEEETT
T ss_pred EEecCCCEEEEEEcCC
Confidence 4778899999999654
No 35
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=33.63 E-value=36 Score=19.88 Aligned_cols=27 Identities=4% Similarity=0.041 Sum_probs=17.5
Q ss_pred cccccCCCceeeCCEEEEeecCCCcceEEe
Q 047479 42 YYSWVDGKEFKVGDTLGESLKLRKNEKFYL 71 (84)
Q Consensus 42 Y~~Wa~~~~F~vGD~L~F~Y~~~~~sV~~v 71 (84)
...|+..+-|+..-...|. ..+.++.|
T Consensus 17 maRW~Gd~~yYparI~Si~---s~~~~Y~V 43 (66)
T 2l8d_A 17 MGRWPGSVLYYEVQVTSYD---DASHLYTV 43 (66)
T ss_dssp EEECTTSSCEEEEEEEEEE---TTTTEEEE
T ss_pred EEEcCCCccceEEEEEEec---cCCceEEE
Confidence 5677666778877777776 33445444
No 36
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=33.38 E-value=23 Score=20.50 Aligned_cols=22 Identities=9% Similarity=0.129 Sum_probs=16.7
Q ss_pred CceeeCCEEEEeecC-CCcceEE
Q 047479 49 KEFKVGDTLGESLKL-RKNEKFY 70 (84)
Q Consensus 49 ~~F~vGD~L~F~Y~~-~~~sV~~ 70 (84)
-++++||++.|.... ..|++..
T Consensus 19 i~v~~G~tV~~~n~~~~~H~~~~ 41 (102)
T 1kdj_A 19 ITVSAGEAVEFTLVGETGHNIVF 41 (102)
T ss_dssp EEECTTCCEEEEECSSSCBCCEE
T ss_pred EEECCCCEEEEEECCCCCeEEEE
Confidence 478899999999765 3688754
No 37
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=32.20 E-value=27 Score=22.10 Aligned_cols=41 Identities=12% Similarity=0.166 Sum_probs=30.5
Q ss_pred ceEEEecCC---CCCcccCC-----C----CcccccCCCceeeCCEEEEeecC
Q 047479 23 ATTYTVGDN---AGWTTQGK-----V----DYYSWVDGKEFKVGDTLGESLKL 63 (84)
Q Consensus 23 a~~~~VG~~---~gW~~~~~-----~----~Y~~Wa~~~~F~vGD~L~F~Y~~ 63 (84)
-..|+||+. ..|++... . .+..|...-.+..|..+.|||-.
T Consensus 23 e~v~vvGs~~~LG~W~p~~av~L~~~~~~~~~~~W~~~v~lp~~~~~eYKyvi 75 (131)
T 2z0b_A 23 EVFAICGSCDALGNWNPQNAVALLPENDTGESMLWKATIVLSRGVSVQYRYFK 75 (131)
T ss_dssp CEEEEEESSGGGTTTCGGGCEECEECCTTCCSSEEEEEEEECTTCCEEEEEEE
T ss_pred CEEEEEeCCCcCCCCCccccccccccccCCCCCeEEEEEEcCCCCcEEEEEEE
Confidence 356889984 46986311 2 67889988888889999999943
No 38
>2l55_A SILB,silver efflux protein, MFP component of the components proton antiporter metal...; APO form, AG(I)-binding site; NMR {Cupriavidus metallidurans}
Probab=30.69 E-value=25 Score=20.79 Aligned_cols=23 Identities=22% Similarity=0.151 Sum_probs=17.8
Q ss_pred ccccCCCceeeCCEEEEeecCCC
Q 047479 43 YSWVDGKEFKVGDTLGESLKLRK 65 (84)
Q Consensus 43 ~~Wa~~~~F~vGD~L~F~Y~~~~ 65 (84)
.+-+.-+.+++||.+.|.+....
T Consensus 40 ~~~~~l~~lk~Gd~V~F~~~~~~ 62 (82)
T 2l55_A 40 PPAGLPQGLKAGDRVAFSFRLDP 62 (82)
T ss_dssp CTTCCCSSCSTTCEEEEEEEEET
T ss_pred CChhHhhcCCCCCEEEEEEEECC
Confidence 34455678999999999997643
No 39
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=30.45 E-value=27 Score=21.67 Aligned_cols=22 Identities=14% Similarity=-0.061 Sum_probs=16.7
Q ss_pred CceeeCCEEEEeecCCCcceEE
Q 047479 49 KEFKVGDTLGESLKLRKNEKFY 70 (84)
Q Consensus 49 ~~F~vGD~L~F~Y~~~~~sV~~ 70 (84)
-+.++||++.|......|+|..
T Consensus 23 i~V~~GdtV~f~n~d~~H~v~~ 44 (122)
T 2ux6_A 23 LKVAPGDTVTFIPTDKGHNVET 44 (122)
T ss_dssp EEECTTEEEEEEESSSSCCCEE
T ss_pred EEECCCCEEEEEECCCCcEEEE
Confidence 3677899999988665777754
No 40
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=30.42 E-value=35 Score=19.50 Aligned_cols=22 Identities=9% Similarity=0.111 Sum_probs=16.5
Q ss_pred CceeeCCEEEEeecC-CCcceEE
Q 047479 49 KEFKVGDTLGESLKL-RKNEKFY 70 (84)
Q Consensus 49 ~~F~vGD~L~F~Y~~-~~~sV~~ 70 (84)
-+.++||++.|.... ..|++..
T Consensus 21 i~v~~G~~V~~~n~~~~~H~~~~ 43 (98)
T 1pcs_A 21 VTIKAGEEVKWVNNKLSPHNIVF 43 (98)
T ss_dssp EEECTTCEEEEEECSSCCEEEEE
T ss_pred EEECCCCEEEEEECCCCCcEEEE
Confidence 478899999998754 3677754
No 41
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=30.39 E-value=27 Score=21.70 Aligned_cols=34 Identities=9% Similarity=0.188 Sum_probs=23.5
Q ss_pred CCCcccCC-----CCccccc-CCCceeeCCEEEEeecCCC
Q 047479 32 AGWTTQGK-----VDYYSWV-DGKEFKVGDTLGESLKLRK 65 (84)
Q Consensus 32 ~gW~~~~~-----~~Y~~Wa-~~~~F~vGD~L~F~Y~~~~ 65 (84)
..|+..+. ..|+.|. ..-+...|..|.|+|..+.
T Consensus 27 g~Wt~~~~v~M~~~~~~gw~~~TI~l~~g~~~~~~F~dG~ 66 (104)
T 2laa_A 27 GSWTAAPGVKMQDAEISGYAKITVDIGSASQLEAAFNDGN 66 (104)
T ss_dssp SCCCSSSCEECEEETTTTEEEEEEECTTCSCEEEEEECSS
T ss_pred CCCCcCCccccccccCCCeEEEEEECCCCCEEEEEEeCCC
Confidence 47987554 2477885 5555556899999997654
No 42
>2x11_B Ephrin-A5; receptor-signaling protein complex, developmental protein, signaling platform, kinase, transferase, neurogenesis, receptor, cataract; 4.83A {Homo sapiens}
Probab=27.93 E-value=20 Score=24.57 Aligned_cols=58 Identities=16% Similarity=0.133 Sum_probs=29.6
Q ss_pred hccceEEEecCCCCCcccCCCCcccccCCCceeeCCEEEEeecCCCcce------EEeccccchhhhcc
Q 047479 20 SVAATTYTVGDNAGWTTQGKVDYYSWVDGKEFKVGDTLGESLKLRKNEK------FYLQNEKSKRNYLA 82 (84)
Q Consensus 20 ~~~a~~~~VG~~~gW~~~~~~~Y~~Wa~~~~F~vGD~L~F~Y~~~~~sV------~~v~~ev~k~~Y~~ 82 (84)
.+.+..+.| -|+..++. +..=.-....++||.|.+--+...+++ ..+-=.|+|++|++
T Consensus 28 ~~~~~r~~V----yWNSsNp~-F~~~~~~i~V~i~D~LDIiCP~y~~~~~~~~~E~y~LY~Vs~e~y~~ 91 (177)
T 2x11_B 28 AAVADRYAV----YWNSSNPR-FQRGDYHIDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSA 91 (177)
T ss_dssp --CCSEEEE----ECSTTCHH-HHTSCCEEEECTTCEEEEECCCCCSSSCSSSCCCEEEEEECHHHHHH
T ss_pred eccCccCce----EcCCCCcC-ccCCCceEEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhcc
Confidence 355666666 69862111 110001135778999999765432211 11112578999875
No 43
>1wjj_A Hypothetical protein F20O9.120; DNA-binding protein-related, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: b.40.4.3
Probab=27.77 E-value=15 Score=24.23 Aligned_cols=33 Identities=21% Similarity=0.224 Sum_probs=24.6
Q ss_pred EEEecCCCCCcccCCCCcccccCC-CceeeCCEEEEeec
Q 047479 25 TYTVGDNAGWTTQGKVDYYSWVDG-KEFKVGDTLGESLK 62 (84)
Q Consensus 25 ~~~VG~~~gW~~~~~~~Y~~Wa~~-~~F~vGD~L~F~Y~ 62 (84)
+..|||+.| ...++.|... ..++.||++.+...
T Consensus 65 ~~lVgDeTG-----~I~ftlW~e~~~~l~~Gd~v~i~na 98 (145)
T 1wjj_A 65 ECLIGDETG-----CILFTARNDQVDLMKPGATVILRNS 98 (145)
T ss_dssp EEEEECSSC-----EEEEEECTTHHHHTCTTCEEEEEEE
T ss_pred EEEEEcCCc-----EEEEEEecCCcCcCCCCCEEEEecc
Confidence 468899888 2357888764 45889999998764
No 44
>3udc_A Small-conductance mechanosensitive channel, C-TER peptide from small-conductance...; membrane protein; 3.35A {Thermoanaerobacter tengcongensis} PDB: 3t9n_A*
Probab=27.57 E-value=22 Score=25.07 Aligned_cols=14 Identities=29% Similarity=0.375 Sum_probs=11.4
Q ss_pred CCCceeeCCEEEEe
Q 047479 47 DGKEFKVGDTLGES 60 (84)
Q Consensus 47 ~~~~F~vGD~L~F~ 60 (84)
-.++|++||.+...
T Consensus 125 ~~~pf~vGD~I~i~ 138 (285)
T 3udc_A 125 FEDQFSVGDYVTIN 138 (285)
T ss_dssp HTTSCCTTCEEEET
T ss_pred hhCCccCCCEEEEC
Confidence 35899999999873
No 45
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=27.48 E-value=40 Score=20.74 Aligned_cols=42 Identities=7% Similarity=-0.008 Sum_probs=27.1
Q ss_pred cceEEEecCC-CCCcccCCCCcccccCCCceeeCCEEEEeecC-----CCcceEEe
Q 047479 22 AATTYTVGDN-AGWTTQGKVDYYSWVDGKEFKVGDTLGESLKL-----RKNEKFYL 71 (84)
Q Consensus 22 ~a~~~~VG~~-~gW~~~~~~~Y~~Wa~~~~F~vGD~L~F~Y~~-----~~~sV~~v 71 (84)
...++.|+-. .+|...| ..-+++.||++.|.+.+ ..|++...
T Consensus 15 ~~~~v~V~~~~~~~~F~P--------~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~ 62 (140)
T 1qhq_A 15 PAQTVEVRAAPDALAFAQ--------TSLSLPANTVVRLDFVNQNNLGVQHNWVLV 62 (140)
T ss_dssp CSEEEEEEBCSSSSSBSC--------SEEEEETTCEEEEEEEECCSSCCCBCCEEE
T ss_pred CCEEEEEEEeCCCceEeC--------CeEEECCCCEEEEEEECCCCCCCceeEEEe
Confidence 4456777654 3466521 34678999999988754 46776554
No 46
>4dol_A AT1G53520, 94270-95700, chalcon; chalcone-isomerase like fold, fatty-acid binding, isomerase; HET: PLM; 1.70A {Arabidopsis thaliana}
Probab=27.01 E-value=39 Score=22.89 Aligned_cols=23 Identities=9% Similarity=0.021 Sum_probs=17.8
Q ss_pred CceeeCCEEEEeecCCCcceEEe
Q 047479 49 KEFKVGDTLGESLKLRKNEKFYL 71 (84)
Q Consensus 49 ~~F~vGD~L~F~Y~~~~~sV~~v 71 (84)
+.|..||.|.|.|.++..-.+.+
T Consensus 146 ~~v~kGd~i~~~~~p~~~l~i~~ 168 (217)
T 4dol_A 146 RPLNKGSVILLTWINTSNMLVSV 168 (217)
T ss_dssp CCBCTTCEEEEEEEETTEEEEEE
T ss_pred CcCCCCCEEEEEEcCCCCEEEEE
Confidence 58999999999999876444433
No 47
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=26.81 E-value=36 Score=21.09 Aligned_cols=39 Identities=23% Similarity=0.297 Sum_probs=23.4
Q ss_pred EEecCCCCCcccCCCC-----ccccc-CCCceeeCCEEEEeecCCC
Q 047479 26 YTVGDNAGWTTQGKVD-----YYSWV-DGKEFKVGDTLGESLKLRK 65 (84)
Q Consensus 26 ~~VG~~~gW~~~~~~~-----Y~~Wa-~~~~F~vGD~L~F~Y~~~~ 65 (84)
|.+|+ ..|+..|... ...|. ..-+..-++.|.|.|..+.
T Consensus 27 y~~~~-g~Wt~vpgv~M~~~~~~Gw~~~TI~~~~~~~l~~~F~dG~ 71 (102)
T 2c3v_A 27 YSLNQ-GAWTTLPGVPLTKSEXEGXVKVTIEAEEGSQLRAAFNNGS 71 (102)
T ss_dssp EEETT-CCBCCTTCEECEECSSTTEEEEEECCCTTCEEEEEEECSS
T ss_pred EeCCC-CCcccCCCcCccccccCCceEEEEecCCCceEEEEEeCCC
Confidence 34454 4698765532 45562 2223334689999998765
No 48
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=26.76 E-value=56 Score=19.14 Aligned_cols=27 Identities=7% Similarity=0.185 Sum_probs=18.5
Q ss_pred cccccCCCceeeCCEEEEeecCCCcceEEe
Q 047479 42 YYSWVDGKEFKVGDTLGESLKLRKNEKFYL 71 (84)
Q Consensus 42 Y~~Wa~~~~F~vGD~L~F~Y~~~~~sV~~v 71 (84)
...|...+-|+..-...|. ..+.++.|
T Consensus 20 maRW~Gd~~yYparItSit---s~~~~Y~V 46 (68)
T 2dig_A 20 RGRWPGSSLYYEVEILSHD---STSQLYTV 46 (68)
T ss_dssp EEECTTTCCEEEEEEEEEE---TTTTEEEE
T ss_pred EEEccCCccceEEEEEEec---cCCceEEE
Confidence 6778877888887777777 34455554
No 49
>2ftc_K 39S ribosomal protein L19, mitochondrial; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus}
Probab=26.25 E-value=30 Score=21.54 Aligned_cols=13 Identities=38% Similarity=0.496 Sum_probs=11.4
Q ss_pred ceeeCCEEEEeec
Q 047479 50 EFKVGDTLGESLK 62 (84)
Q Consensus 50 ~F~vGD~L~F~Y~ 62 (84)
.|++||++...|.
T Consensus 3 ~f~~GDtv~V~~~ 15 (98)
T 2ftc_K 3 EFYVGSILRVTTA 15 (98)
T ss_pred ccCCCCEEEEEEE
Confidence 5999999998885
No 50
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=26.11 E-value=44 Score=19.65 Aligned_cols=21 Identities=24% Similarity=0.151 Sum_probs=15.6
Q ss_pred CceeeCCEEEEeecCC-CcceE
Q 047479 49 KEFKVGDTLGESLKLR-KNEKF 69 (84)
Q Consensus 49 ~~F~vGD~L~F~Y~~~-~~sV~ 69 (84)
-+.++||++.|..... .|++.
T Consensus 35 i~v~~Gd~V~~~N~d~~~H~v~ 56 (105)
T 2ov0_A 35 LHVKVGDTVTWINREAMPHNVH 56 (105)
T ss_dssp EEECTTCEEEEEECSSSCBCCE
T ss_pred EEECCCCEEEEEECCCCCEEEE
Confidence 4778899999986543 57765
No 51
>3r8s_P 50S ribosomal protein L19; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_N 1p86_N 2awb_P 2gya_N 2gyc_N 2aw4_P 2i2v_P 2j28_P 2i2t_P* 2qao_P* 2qba_P* 2qbc_P* 2qbe_P 2qbg_P 2qbi_P* 2qbk_P* 2qov_P 2qox_P 2qoz_P* 2qp1_P* ...
Probab=25.04 E-value=30 Score=22.15 Aligned_cols=14 Identities=29% Similarity=0.449 Sum_probs=12.2
Q ss_pred CceeeCCEEEEeec
Q 047479 49 KEFKVGDTLGESLK 62 (84)
Q Consensus 49 ~~F~vGD~L~F~Y~ 62 (84)
-.|++||++...|.
T Consensus 17 P~f~~GDtv~V~~~ 30 (114)
T 3r8s_P 17 PSFRPGDTVEVKVW 30 (114)
T ss_dssp CCCCTTCEEEEEEE
T ss_pred CccCCCCEEEEEEE
Confidence 47999999999884
No 52
>4gb7_A 6-aminohexanoate-dimer hydrolase; structural genomics, IDP05595, national institute of allergy and infectious diseases; HET: MSE; 1.60A {Bacillus anthracis}
Probab=24.44 E-value=15 Score=26.92 Aligned_cols=11 Identities=27% Similarity=1.039 Sum_probs=5.9
Q ss_pred CCcccCCCCccccc
Q 047479 33 GWTTQGKVDYYSWV 46 (84)
Q Consensus 33 gW~~~~~~~Y~~Wa 46 (84)
+|.-+ .|+.|+
T Consensus 46 nw~~~---p~~~ws 56 (422)
T 4gb7_A 46 NWLDD---PYLRWS 56 (422)
T ss_dssp TTTST---THHHHH
T ss_pred HhcCC---chHHHH
Confidence 46542 366665
No 53
>4dok_A Similarity to chalcone-flavonone isomerase; chalcone-isomerase like protein, chalcone-isomerase like FOL isomerase; 1.70A {Arabidopsis thaliana}
Probab=23.70 E-value=54 Score=22.53 Aligned_cols=20 Identities=15% Similarity=0.214 Sum_probs=16.6
Q ss_pred CCceeeCCEEEEeecCCCcc
Q 047479 48 GKEFKVGDTLGESLKLRKNE 67 (84)
Q Consensus 48 ~~~F~vGD~L~F~Y~~~~~s 67 (84)
++.|..||++.|.+.++...
T Consensus 135 ~~~~~~G~~I~~~~~p~~G~ 154 (208)
T 4dok_A 135 SKYFKANSVITYHFSAKDGI 154 (208)
T ss_dssp TCEECTTCEEEEEECSSSCC
T ss_pred cCCCCCCCEEEEEEeCCCCe
Confidence 46899999999999877543
No 54
>2vv5_A MSCS, small-conductance mechanosensitive channel; ION transport, transmembrane, inner membrane, membrane struc membrane protein, membrane; 3.45A {Escherichia coli} SCOP: b.38.1.3 d.58.43.1 f.34.1.1 PDB: 2oau_A
Probab=23.28 E-value=24 Score=24.91 Aligned_cols=15 Identities=20% Similarity=0.315 Sum_probs=12.2
Q ss_pred cCCCceeeCCEEEEe
Q 047479 46 VDGKEFKVGDTLGES 60 (84)
Q Consensus 46 a~~~~F~vGD~L~F~ 60 (84)
.-.++|++||.+.+.
T Consensus 125 ~~~~pf~vGD~I~i~ 139 (286)
T 2vv5_A 125 VMFRPFRAGEYVDLG 139 (286)
T ss_dssp HTTCSSCTTCEEESS
T ss_pred HhcCCccCCCEEEEC
Confidence 356899999999874
No 55
>1ed7_A Chitinase A1, (CHBD-CHIA1); twisted beta-sandwich, hydrolase; NMR {Bacillus circulans} SCOP: b.72.2.1
Probab=22.90 E-value=23 Score=18.55 Aligned_cols=16 Identities=13% Similarity=0.437 Sum_probs=13.2
Q ss_pred cccCCCceeeCCEEEE
Q 047479 44 SWVDGKEFKVGDTLGE 59 (84)
Q Consensus 44 ~Wa~~~~F~vGD~L~F 59 (84)
.|+.+....+||.+.+
T Consensus 1 ~W~~~~~Y~~Gd~Vty 16 (45)
T 1ed7_A 1 AWQVNTAYTAGQLVTY 16 (45)
T ss_dssp CCCSSEEECTTCCEEE
T ss_pred CccCCceEcCCCEEEE
Confidence 4888999999999654
No 56
>2p5d_A UPF0310 protein mjecl36; NPPSFA, national project on protein structural and functional analyses; 1.70A {Methanocaldococcus jannaschii}
Probab=22.73 E-value=55 Score=21.09 Aligned_cols=20 Identities=25% Similarity=-0.029 Sum_probs=15.9
Q ss_pred CcccccCCCceeeCCEEEEe
Q 047479 41 DYYSWVDGKEFKVGDTLGES 60 (84)
Q Consensus 41 ~Y~~Wa~~~~F~vGD~L~F~ 60 (84)
||.+-.--++.++||.+.|-
T Consensus 28 n~~arn~lr~Mk~GD~~~fY 47 (147)
T 2p5d_A 28 AERYKNTINKVKVGDKLIIY 47 (147)
T ss_dssp CGGGHHHHTTCCTTCEEEEE
T ss_pred CHHHHHHHHhCCCCCEEEEE
Confidence 56665555799999999998
No 57
>3czu_B Ephrin-A1; ATP-binding, kinase, nucleotide-binding, receptor, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG MAN; 2.65A {Homo sapiens} PDB: 3mbw_B*
Probab=22.26 E-value=57 Score=22.41 Aligned_cols=59 Identities=15% Similarity=0.044 Sum_probs=29.4
Q ss_pred hhccceEEEecCCCCCcccCCCCcccccCCCceeeCCEEEEeecCCCc-ce------EEeccccchhhhcc
Q 047479 19 ASVAATTYTVGDNAGWTTQGKVDYYSWVDGKEFKVGDTLGESLKLRKN-EK------FYLQNEKSKRNYLA 82 (84)
Q Consensus 19 ~~~~a~~~~VG~~~gW~~~~~~~Y~~Wa~~~~F~vGD~L~F~Y~~~~~-sV------~~v~~ev~k~~Y~~ 82 (84)
+.+++..+.| -|+..++.-... --....++||.|.+--+.... ++ ..+-=.|+|++|++
T Consensus 25 ~~~sa~rh~V----yWNSsNp~F~~~-~y~i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~e~y~s 90 (182)
T 3czu_B 25 AMDAADRHTV----FWNSSNPKFRNE-DYTIHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQL 90 (182)
T ss_dssp ----CCEEEE----ECSTTCGGGTTS-CCEEEECTTCEEEEECCCCC--CCCGGGSCCEEEEEECHHHHHH
T ss_pred hhhhccccce----EEcCCCccccCC-CceEEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhhh
Confidence 3445667776 698622111111 122466899999998654321 11 11112578999875
No 58
>3v2d_T 50S ribosomal protein L19; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 2hgq_S 2hgj_S 2hgu_S 2j03_T 2jl6_T 2jl8_T 2v47_T 2v49_T 2wdi_T 2wdj_T 2wdl_T 2wdn_T 2wh2_T 2wh4_T 2wrj_T 2wrl_T 2wro_T 2wrr_T 2x9s_T 2x9u_T ...
Probab=22.14 E-value=36 Score=22.73 Aligned_cols=14 Identities=50% Similarity=0.691 Sum_probs=12.2
Q ss_pred CceeeCCEEEEeec
Q 047479 49 KEFKVGDTLGESLK 62 (84)
Q Consensus 49 ~~F~vGD~L~F~Y~ 62 (84)
-.|++||+|...|.
T Consensus 20 P~F~~GDtV~V~~~ 33 (146)
T 3v2d_T 20 PEFRPGDTVRVSYK 33 (146)
T ss_dssp CCCCTTCEEEEEEE
T ss_pred CCcCCCCEEEEEEE
Confidence 47999999999885
No 59
>4db5_A Tumor necrosis factor ligand superfamily member 1; gitrl, glucocorticoid-induced TNF receptor ligand, immune SY tnfrsf18; HET: B3P; 1.52A {Oryctolagus cuniculus} PDB: 4e4s_A 2r30_A 3b93_A 3b94_A 2q1m_A
Probab=21.38 E-value=42 Score=21.85 Aligned_cols=17 Identities=24% Similarity=0.388 Sum_probs=13.9
Q ss_pred CceeeCCEEEEeecCCC
Q 047479 49 KEFKVGDTLGESLKLRK 65 (84)
Q Consensus 49 ~~F~vGD~L~F~Y~~~~ 65 (84)
-.|+.||+|.++++..+
T Consensus 88 feL~~GD~Ifv~vn~~~ 104 (125)
T 4db5_A 88 YEFDAGDIIELRFNSDD 104 (125)
T ss_dssp EEECTTCEEEEEESCGG
T ss_pred EEecCCCEEEEEECChh
Confidence 36889999999998654
No 60
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=20.70 E-value=48 Score=20.81 Aligned_cols=28 Identities=7% Similarity=-0.003 Sum_probs=21.4
Q ss_pred CceeeCCEEEEeecCCCcceEEeccccchh
Q 047479 49 KEFKVGDTLGESLKLRKNEKFYLQNEKSKR 78 (84)
Q Consensus 49 ~~F~vGD~L~F~Y~~~~~sV~~v~~ev~k~ 78 (84)
.+|..||.++| +++..-..+|.+.|.|-
T Consensus 82 ~~l~aGD~~~~--P~G~~gtWev~e~vrK~ 109 (116)
T 3es4_A 82 VKIGPGSIVSI--AKGVPSRLEILSSFRKL 109 (116)
T ss_dssp EEECTTEEEEE--CTTCCEEEEECSCEEEE
T ss_pred EEECCCCEEEE--CCCCeEEEEEeEEEeEE
Confidence 58999999665 66777888887777663
Done!