BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047480
(719 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 554 bits (1427), Expect = e-156, Method: Compositional matrix adjust.
Identities = 281/717 (39%), Positives = 447/717 (62%), Gaps = 11/717 (1%)
Query: 7 EHSSLLALLESCKSLKQALQIHGQIVHSG-LNHHISSSQLISFFALSGCKNGLFRSRILF 65
E S ++L+E C SL+Q Q HG ++ +G + S+S+L + ALS + L +R +F
Sbjct: 29 ERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFAS-LEYARKVF 87
Query: 66 SQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSF 125
+I PN F WNTL+R Y+ P ++ + M+S+ PN +TFPF++ + A +SS
Sbjct: 88 DEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSL 147
Query: 126 KSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGY 185
G +H +K + D+F+ N+LIH Y G +++A KVF +D+VS+N++ING+
Sbjct: 148 SLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGF 207
Query: 186 AQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGS 245
Q P AL LF+KM+ ++ T V + SAC ++ + G+Q + + +N V
Sbjct: 208 VQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR--VNV 265
Query: 246 NMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQM 305
N+ L A+++MY KCG + A+R+F M K W++M+ GY E AR++ + M
Sbjct: 266 NLTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDGYAISEDYEAAREVLNSM 324
Query: 306 DQRDLVSWTAMISGYSQVGGFSQALELFGKME-SLGIHPDEVTMVAVLRACVGLGALDFG 364
Q+D+V+W A+IS Y Q G ++AL +F +++ + +++T+V+ L AC +GAL+ G
Sbjct: 325 PQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG 384
Query: 365 KRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGL 424
+ +H YI+ N +T+A+I MY+KCG ++ + VF + K + V +++++I GL
Sbjct: 385 RWIHS-YIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEK--RDVFVWSAMIGGL 441
Query: 425 AQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESM-LNYGIKPQ 483
A HG G ++ +F +M+ +KP+GVTF V CACSH GLV+E + F M NYGI P+
Sbjct: 442 AMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPE 501
Query: 484 MEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIAGQKLL 543
+HY C+VD+L R G L++A I++MP ++ +W ALL AC++H N + E+A +LL
Sbjct: 502 EKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLL 561
Query: 544 DLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTLHRFLASK 603
+LEP + +VLLSN+ A+ +WE ++RK M +G++K PG S IE +G +H FL+
Sbjct: 562 ELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGD 621
Query: 604 KSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVVFDVDEEE-KETVVSYHSEKLALAFGLI 662
+HP ++++ L ++ KLKS GY P QV+ ++EEE KE ++ HSEKLA+ +GLI
Sbjct: 622 NAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLI 681
Query: 663 NSRSKETIRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKKGNCSCMDFW 719
++ + + IR+ KNLR+CGDCH KL+S++Y REI+VRD RFH F+ G CSC DFW
Sbjct: 682 STEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 529 bits (1362), Expect = e-149, Method: Compositional matrix adjust.
Identities = 289/743 (38%), Positives = 440/743 (59%), Gaps = 73/743 (9%)
Query: 12 LALLESCKSLKQALQIHGQIVHSGL-NHHISSSQLISFFALSGCKNGLFRSRILFSQIDN 70
L+LL +CK+L+ IH Q++ GL N + + S+LI F LS GL + +F I
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 71 PNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGCQ 130
PN+ IWNT+ RG++ S P AL LY M+S G++ PN++TFPFVL SCA+ +FK G Q
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLL-PNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 131 IHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSY------------ 178
IH H++K G + DL++ +LI Y G + +AHKVF+ S RD+VSY
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215
Query: 179 -------------------NTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSA 219
N +I+GYA+ AL LF+ M + ++PD T V + SA
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 220 CTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKST 279
C + +G+Q H ++ + GSN+ + A+I++Y+KCG
Sbjct: 276 CAQSGSIELGRQVH--LWIDDHGFGSNLKIVNALIDLYSKCG------------------ 315
Query: 280 AAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESL 339
++E A LF+++ +D++SW +I GY+ + + +AL LF +M
Sbjct: 316 --------------ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 361
Query: 340 GIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFG--RNIFLTTAVIDMYAKCGSI 397
G P++VTM+++L AC LGA+D G+ +H YI+ + G L T++IDMYAKCG I
Sbjct: 362 GETPNDVTMLSILPACAHLGAIDIGRWIHV-YIDKRLKGVTNASSLRTSLIDMYAKCGDI 420
Query: 398 DTALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLC 457
+ A VF I K++S +N++I G A HG + S +F M +G++PD +TFV +L
Sbjct: 421 EAAHQVFNSILH--KSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLS 478
Query: 458 ACSHGGLVEEGKQFFESML-NYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANS 516
ACSH G+++ G+ F +M +Y + P++EHYGCM+DLL G EA +I M + +
Sbjct: 479 ACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDG 538
Query: 517 VIWRALLAACRLHRNAKIGEIAGQKLLDLEPDHGAHYVLLSNMLAETYRWEEARQVRKLM 576
VIW +LL AC++H N ++GE + L+ +EP++ YVLLSN+ A RW E + R L+
Sbjct: 539 VIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALL 598
Query: 577 DDSGIQKPPGWSYIEHNGTLHRFLASKKSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVV 636
+D G++K PG S IE + +H F+ K HP+ +EI ML++M + L+ AG+VP+T +V+
Sbjct: 599 NDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVL 658
Query: 637 FDVDEEEKETVVSYHSEKLALAFGLINSRSKETIRITKNLRICGDCHLAFKLLSEIYRRE 696
+++EE KE + +HSEKLA+AFGLI+++ + I KNLR+C +CH A KL+S+IY+RE
Sbjct: 659 QEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKRE 718
Query: 697 IMVRDAIRFHLFKKGNCSCMDFW 719
I+ RD RFH F+ G CSC D+W
Sbjct: 719 IIARDRTRFHHFRDGVCSCNDYW 741
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 511 bits (1317), Expect = e-144, Method: Compositional matrix adjust.
Identities = 276/718 (38%), Positives = 422/718 (58%), Gaps = 15/718 (2%)
Query: 9 SSLLALLESCKSLKQALQIHGQIVHSGLNHHISSSQLISFFALSGCKNGLFRSRILFSQI 68
+++L L CKSL Q+H I+ + +NH ++S L + S N + + S
Sbjct: 13 NTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSF-LFNLSVSSSSINLSYALNVFSSIP 71
Query: 69 DNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSG 128
P ++N +R SRS P+ ++ Y + G + F+F +L + +++S+ G
Sbjct: 72 SPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVG-GRLDQFSFLPILKAVSKVSALFEG 130
Query: 129 CQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQV 188
++H K D F+ + Y+ G IN A VF+ RD+V++NT+I Y +
Sbjct: 131 MELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRF 190
Query: 189 KEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNML 248
A LF +M+DS + PD + SAC + R + + + +N + +++L
Sbjct: 191 GLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLL 250
Query: 249 LKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQR 308
TA++ MYA G M+MA F M + ++ ++M+SGY++ G+++ A+ +FDQ +++
Sbjct: 251 --TALVTMYAGAGCMDMAREFFRKMSV-RNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKK 307
Query: 309 DLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRLH 368
DLV WT MIS Y + +AL +F +M GI PD V+M +V+ AC LG LD K +H
Sbjct: 308 DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVH 367
Query: 369 QQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHG 428
N + + + A+I+MYAKCG +D VF K+P+ + V ++S+I+ L+ HG
Sbjct: 368 SCIHVNGL-ESELSINNALINMYAKCGGLDATRDVFEKMPR--RNVVSWSSMINALSMHG 424
Query: 429 LGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLN-YGIKPQMEHY 487
++++F M+ ++P+ VTFV VL CSH GLVEEGK+ F SM + Y I P++EHY
Sbjct: 425 EASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHY 484
Query: 488 GCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIAGQKLLDLEP 547
GCMVDL R L EA +I+SMP +N VIW +L++ACR+H ++G+ A +++L+LEP
Sbjct: 485 GCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEP 544
Query: 548 DHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTLHRFLASKKSHP 607
DH VL+SN+ A RWE+ R +R++M++ + K G S I+ NG H FL K H
Sbjct: 545 DHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHK 604
Query: 608 QTKEIELMLKDMTMKLKSAGYVPNTVQVVFDVDEEEKETVVSYHSEKLALAFGLINSRSK 667
Q+ EI L ++ KLK AGYVP+ V+ DV+EEEK+ +V +HSEKLAL FGL+N +
Sbjct: 605 QSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKE 664
Query: 668 E------TIRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKKGNCSCMDFW 719
E IRI KNLR+C DCHL FKL+S++Y REI+VRD RFH +K G CSC D+W
Sbjct: 665 EEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 508 bits (1307), Expect = e-143, Method: Compositional matrix adjust.
Identities = 272/695 (39%), Positives = 410/695 (58%), Gaps = 45/695 (6%)
Query: 30 QIVHSGLNHHISSSQLISFFALSGCKNGLFR----SRILFSQIDNPNIFIWNTLMRGYSR 85
QI S +NHH+ + L + FR S +LFS PNIF++N+L+ G+
Sbjct: 31 QIHVSLINHHLHHDTFLVNLLLK--RTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVN 88
Query: 86 SDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGCQIHCHIIKFGLEFDLF 145
+ E L L+ S+ G+ + FTFP VL +C R SS K G +H ++K G D+
Sbjct: 89 NHLFHETLDLFLSIRKHGLY-LHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVA 147
Query: 146 IRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVKEPCPALWLFRKMQDSC 205
+L+ YS G +N+AHK+F+ R +V++ L +GY A+ LF+KM +
Sbjct: 148 AMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMG 207
Query: 206 IQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNM 265
++PD++ V + SAC + D G+ V Y + N ++T ++N+YAKC
Sbjct: 208 VKPDSYFIVQVLSACVHVGDLDSGEWI--VKYMEEMEMQKNSFVRTTLVNLYAKC----- 260
Query: 266 AERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGG 325
GK+E+AR +FD M ++D+V+W+ MI GY+
Sbjct: 261 ---------------------------GKMEKARSVFDSMVEKDIVTWSTMIQGYASNSF 293
Query: 326 FSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRNIFLTT 385
+ +ELF +M + PD+ ++V L +C LGALD G+ I+ F N+F+
Sbjct: 294 PKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGE-WGISLIDRHEFLTNLFMAN 352
Query: 386 AVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFREMELMGL 445
A+IDMYAKCG++ VF ++ + K + + N+ ISGLA++G + S AVF + E +G+
Sbjct: 353 ALIDMYAKCGAMARGFEVFKEMKE--KDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGI 410
Query: 446 KPDGVTFVTVLCACSHGGLVEEGKQFFESM-LNYGIKPQMEHYGCMVDLLARDGRLDEAY 504
PDG TF+ +LC C H GL+++G +FF ++ Y +K +EHYGCMVDL R G LD+AY
Sbjct: 411 SPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAY 470
Query: 505 GLIQSMPYDANSVIWRALLAACRLHRNAKIGEIAGQKLLDLEPDHGAHYVLLSNMLAETY 564
LI MP N+++W ALL+ CRL ++ ++ E ++L+ LEP + +YV LSN+ +
Sbjct: 471 RLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGG 530
Query: 565 RWEEARQVRKLMDDSGIQKPPGWSYIEHNGTLHRFLASKKSHPQTKEIELMLKDMTMKLK 624
RW+EA +VR +M+ G++K PG+S+IE G +H FLA KSHP + +I L+D+ +++
Sbjct: 531 RWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMR 590
Query: 625 SAGYVPNTVQVVFDVDEEEKETVVSYHSEKLALAFGLINSRSKETIRITKNLRICGDCHL 684
G+VP T V FDV+EEEKE V+ YHSEKLA+A GLI++ + IR+ KNLR+CGDCH
Sbjct: 591 LMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHE 650
Query: 685 AFKLLSEIYRREIMVRDAIRFHLFKKGNCSCMDFW 719
KL+S+I RREI+VRD RFH F G+CSC D+W
Sbjct: 651 VMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 497 bits (1280), Expect = e-139, Method: Compositional matrix adjust.
Identities = 268/700 (38%), Positives = 419/700 (59%), Gaps = 12/700 (1%)
Query: 23 QALQIHGQIVHSGLNHHI-SSSQLISFFALSGCKNGLFRSRILFSQIDNPNIFIWNTLMR 81
+QIHG IV G + + L+ F+A G L +R +F ++ N+ W +++
Sbjct: 152 NGIQIHGLIVKMGYAKDLFVQNSLVHFYAECG---ELDSARKVFDEMSERNVVSWTSMIC 208
Query: 82 GYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGCQIHCHIIKFGLE 141
GY+R D ++A+ L+ M+ V+PN+ T V+++CA+L ++G +++ I G+E
Sbjct: 209 GYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIE 268
Query: 142 FDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVKEPCPALWLFRKM 201
+ + +AL+ Y I+ A ++F+ A +L N + + Y + AL +F M
Sbjct: 269 VNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM 328
Query: 202 QDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCG 261
DS ++PD + ++ S+C++L + GK H V +N N+ A+I+MY KC
Sbjct: 329 MDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC--NALIDMYMKCH 386
Query: 262 LMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYS 321
+ A R+F M +K+ W+S+++GY G+++ A + F+ M ++++VSW +ISG
Sbjct: 387 RQDTAFRIFDRMS-NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV 445
Query: 322 QVGGFSQALELFGKMESL-GIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRN 380
Q F +A+E+F M+S G++ D VTM+++ AC LGALD K ++ YIE +
Sbjct: 446 QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY-YIEKNGIQLD 504
Query: 381 IFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFREM 440
+ L T ++DM+++CG ++A+S+F + + VS + + I +A G E +I +F +M
Sbjct: 505 VRLGTTLVDMFSRCGDPESAMSIFNSLTN--RDVSAWTAAIGAMAMAGNAERAIELFDDM 562
Query: 441 ELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLN-YGIKPQMEHYGCMVDLLARDGR 499
GLKPDGV FV L ACSHGGLV++GK+ F SML +G+ P+ HYGCMVDLL R G
Sbjct: 563 IEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGL 622
Query: 500 LDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIAGQKLLDLEPDHGAHYVLLSNM 559
L+EA LI+ MP + N VIW +LLAACR+ N ++ A +K+ L P+ YVLLSN+
Sbjct: 623 LEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNV 682
Query: 560 LAETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTLHRFLASKKSHPQTKEIELMLKDM 619
A RW + +VR M + G++KPPG S I+ G H F + +SHP+ IE ML ++
Sbjct: 683 YASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEV 742
Query: 620 TMKLKSAGYVPNTVQVVFDVDEEEKETVVSYHSEKLALAFGLINSRSKETIRITKNLRIC 679
+ + G+VP+ V+ DVDE+EK ++S HSEKLA+A+GLI+S TIRI KNLR+C
Sbjct: 743 SQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVC 802
Query: 680 GDCHLAFKLLSEIYRREIMVRDAIRFHLFKKGNCSCMDFW 719
DCH K S++Y REI++RD RFH ++G CSC DFW
Sbjct: 803 SDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 223 bits (569), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 153/531 (28%), Positives = 271/531 (51%), Gaps = 73/531 (13%)
Query: 15 LESCKSLKQALQIHGQIVHSGLNHHISS-SQLISFFALSGCKNGLFRSRILFSQIDN-PN 72
L++CK++ + H + GL++ +S+ ++L++ G + L ++ +F ++
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 73 IFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGCQIH 132
F++N+L+RGY+ S EA++L+ M++ GI SP+ +TFPF L++CA+ + +G QIH
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGI-SPDKYTFPFGLSACAKSRAKGNGIQIH 157
Query: 133 CHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVKEPC 192
I+K G DLF++N+L+HFY+ G +++A KVF+ R++VS+ ++I GYA+
Sbjct: 158 GLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAK 217
Query: 193 PALWL-FRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKT 251
A+ L FR ++D + P++ T V + SAC +L D G++ +A + +N G + N L+ +
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI-RNSG-IEVNDLMVS 275
Query: 252 AVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQRDLV 311
A+++MY KC +++A+R+F G S ++M S Y R+G
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLC-NAMASNYVRQGLTR--------------- 319
Query: 312 SWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQY 371
+AL +F M G+ PD ++M++ + +C L + +GK H
Sbjct: 320 ----------------EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYV 363
Query: 372 IENVVFGRNIFLTTAVIDMYAKC-------------------------------GSIDTA 400
+ N F + A+IDMY KC G +D A
Sbjct: 364 LRN-GFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAA 422
Query: 401 LSVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFREMELM-GLKPDGVTFVTVLCAC 459
F +P+ K + +N+IISGL Q L E +I VF M+ G+ DGVT +++ AC
Sbjct: 423 WETFETMPE--KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASAC 480
Query: 460 SHGGLVEEGKQFFESMLNYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSM 510
H G ++ K + + GI+ + +VD+ +R G + A + S+
Sbjct: 481 GHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 496 bits (1276), Expect = e-139, Method: Compositional matrix adjust.
Identities = 268/719 (37%), Positives = 428/719 (59%), Gaps = 47/719 (6%)
Query: 4 LVLEHSSLLALLESCKSLKQALQIHGQIVHSGLNHHI-SSSQLISFFALSGCKNGLFRSR 62
L ++ + ++L++C+++ +IH + G + ++ LI ++ + +R
Sbjct: 149 LTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSR---YKAVGNAR 205
Query: 63 ILFSQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARL 122
ILF ++ ++ WN ++ GY +S + +EAL L S G+ + ++ T +L++C
Sbjct: 206 ILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEA 260
Query: 123 SSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLI 182
F G IH + IK GLE +LF+ N LI Y+ FG + + KVF+ RDL+S+N++I
Sbjct: 261 GDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSII 320
Query: 183 NGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGC 242
Y ++P A+ LF++M+ S IQPD T +++ S ++L D R + + G
Sbjct: 321 KAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRK-GW 379
Query: 243 VGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLF 302
++ + AV+ MYAK GL ++ AR +F
Sbjct: 380 FLEDITIGNAVVVMYAKLGL--------------------------------VDSARAVF 407
Query: 303 DQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLG-IHPDEVTMVAVLRACVGLGAL 361
+ + D++SW +ISGY+Q G S+A+E++ ME G I ++ T V+VL AC GAL
Sbjct: 408 NWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGAL 467
Query: 362 DFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSII 421
G +LH + ++N ++ ++F+ T++ DMY KCG ++ ALS+FY+IP+ + +V +N++I
Sbjct: 468 RQGMKLHGRLLKNGLY-LDVFVVTSLADMYGKCGRLEDALSLFYQIPR-VNSVP-WNTLI 524
Query: 422 SGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESM-LNYGI 480
+ HG GE ++ +F+EM G+KPD +TFVT+L ACSH GLV+EG+ FE M +YGI
Sbjct: 525 ACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGI 584
Query: 481 KPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIAGQ 540
P ++HYGCMVD+ R G+L+ A I+SM ++ IW ALL+ACR+H N +G+IA +
Sbjct: 585 TPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASE 644
Query: 541 KLLDLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTLHRFL 600
L ++EP+H ++VLLSNM A +WE ++R + G++K PGWS +E + + F
Sbjct: 645 HLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFY 704
Query: 601 ASKKSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVVFDVDEEEKETVVSYHSEKLALAFG 660
++HP +E+ L + KLK GYVP+ V+ DV+++EKE ++ HSE+LA+AF
Sbjct: 705 TGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFA 764
Query: 661 LINSRSKETIRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKKGNCSCMDFW 719
LI + +K TIRI KNLR+CGDCH K +S+I REI+VRD+ RFH FK G CSC D+W
Sbjct: 765 LIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 154/550 (28%), Positives = 276/550 (50%), Gaps = 53/550 (9%)
Query: 13 ALLESCKSLKQALQIHGQIVHSGLNHHIS-SSQLISFFALSGCKNGLFRSRILFSQIDNP 71
L C +L+ A +H ++V S ++ S++L++ + G + +R F I N
Sbjct: 59 TLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLG---NVALARHTFDHIQNR 115
Query: 72 NIFIWNTLMRGYSRSDSPQEALVLYT-SMLSKGIVSPNNFTFPFVLNSCARLSSFKSGCQ 130
+++ WN ++ GY R+ + E + ++ MLS G+ +P+ TFP VL +C + G +
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGL-TPDYRTFPSVLKAC---RTVIDGNK 171
Query: 131 IHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVKE 190
IHC +KFG +D+++ +LIH YS + + NA +F+ RD+ S+N +I+GY Q
Sbjct: 172 IHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGN 231
Query: 191 PCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLLK 250
AL L ++ D+ T V++ SACTE D G H+ K+ + S + +
Sbjct: 232 AKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKH--GLESELFVS 285
Query: 251 TAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQRDL 310
+I++YA+ G + ++VF M + + +W+S+I Y +++++ L
Sbjct: 286 NKLIDLYAEFGRLRDCQKVFDRMYV-RDLISWNSIIKAY--------------ELNEQPL 330
Query: 311 VSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQ 370
+A+ LF +M I PD +T++++ LG + + +
Sbjct: 331 -----------------RAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGF 373
Query: 371 YIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGLG 430
+ F +I + AV+ MYAK G +D+A +VF +P N +S +N+IISG AQ+G
Sbjct: 374 TLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP-NTDVIS-WNTIISGYAQNGFA 431
Query: 431 ETSIAVFREMELMG-LKPDGVTFVTVLCACSHGGLVEEGKQFFESMLNYGIKPQMEHYGC 489
+I ++ ME G + + T+V+VL ACS G + +G + +L G+ +
Sbjct: 432 SEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTS 491
Query: 490 MVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIAGQKLLD--LEP 547
+ D+ + GRL++A L +P NSV W L+A H + + + +++LD ++P
Sbjct: 492 LADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKP 550
Query: 548 DHGAHYVLLS 557
DH LLS
Sbjct: 551 DHITFVTLLS 560
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 480 bits (1236), Expect = e-134, Method: Compositional matrix adjust.
Identities = 252/710 (35%), Positives = 416/710 (58%), Gaps = 44/710 (6%)
Query: 13 ALLESCKSLKQALQIHGQIVHSGLNHHISSSQLISFFALSGCKNGLFRSRILFSQIDNPN 72
+L++S Q QIH +++ GL S + S + +R +F + P
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGL--QFSGFLITKLIHASSSFGDITFARQVFDDLPRPQ 83
Query: 73 IFIWNTLMRGYSRSDSPQEALVLYTSM-LSKGIVSPNNFTFPFVLNSCARLSSFKSGCQI 131
IF WN ++RGYSR++ Q+AL++Y++M L++ VSP++FTFP +L +C+ LS + G +
Sbjct: 84 IFPWNAIIRGYSRNNHFQDALLMYSNMQLAR--VSPDSFTFPHLLKACSGLSHLQMGRFV 141
Query: 132 HCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSL--ARDLVSYNTLINGYAQVK 189
H + + G + D+F++N LI Y+ + +A VFEG R +VS+ +++ YAQ
Sbjct: 142 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 201
Query: 190 EPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLL 249
EP AL +F +M+ ++PD V++ +A T L D + G+ HA V K + ++L+
Sbjct: 202 EPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 261
Query: 250 KTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQRD 309
++ MYAKCG ++ A+ LFD+M +
Sbjct: 262 --SLNTMYAKCG--------------------------------QVATAKILFDKMKSPN 287
Query: 310 LVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQ 369
L+ W AMISGY++ G +A+++F +M + + PD +++ + + AC +G+L+ + +++
Sbjct: 288 LILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYE 347
Query: 370 QYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGL 429
Y+ + ++F+++A+IDM+AKCGS++ A VF + + V +++++I G HG
Sbjct: 348 -YVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLD--RDVVVWSAMIVGYGLHGR 404
Query: 430 GETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLNYGIKPQMEHYGC 489
+I+++R ME G+ P+ VTF+ +L AC+H G+V EG FF M ++ I PQ +HY C
Sbjct: 405 AREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYAC 464
Query: 490 MVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIAGQKLLDLEPDH 549
++DLL R G LD+AY +I+ MP +W ALL+AC+ HR+ ++GE A Q+L ++P +
Sbjct: 465 VIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSN 524
Query: 550 GAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTLHRFLASKKSHPQT 609
HYV LSN+ A W+ +VR M + G+ K G S++E G L F KSHP+
Sbjct: 525 TGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRY 584
Query: 610 KEIELMLKDMTMKLKSAGYVPNTVQVVFDVDEEEKETVVSYHSEKLALAFGLINSRSKET 669
+EIE ++ + +LK G+V N + D+++EE E + HSE++A+A+GLI++
Sbjct: 585 EEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTP 644
Query: 670 IRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKKGNCSCMDFW 719
+RITKNLR C +CH A KL+S++ REI+VRD RFH FK G CSC D+W
Sbjct: 645 LRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 172/368 (46%), Gaps = 12/368 (3%)
Query: 10 SLLALLESCKSLKQALQIHGQIVHSGLNHHISSSQLISFFALSGCKNGLFRSRILFSQID 69
S+L + LKQ IH +V GL I LIS + + ++ILF ++
Sbjct: 227 SVLNAFTCLQDLKQGRSIHASVVKMGLE--IEPDLLISLNTMYAKCGQVATAKILFDKMK 284
Query: 70 NPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGC 129
+PN+ +WN ++ GY+++ +EA+ ++ M++K V P+ + +++CA++ S +
Sbjct: 285 SPNLILWNAMISGYAKNGYAREAIDMFHEMINKD-VRPDTISITSAISACAQVGSLEQAR 343
Query: 130 QIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVK 189
++ ++ + D+FI +ALI ++ G + A VF+ +L RD+V ++ +I GY
Sbjct: 344 SMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 190 EPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLL 249
A+ L+R M+ + P+ TF+ + AC R G F + + +
Sbjct: 404 RAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHK--INPQQQH 461
Query: 250 KTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIE----RARQLFDQM 305
VI++ + G ++ A V M + W +++S + +E A+QLF +
Sbjct: 462 YACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLF-SI 520
Query: 306 DQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGK 365
D + + + + Y+ + + E+ +M+ G++ D +R L A G
Sbjct: 521 DPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRG--RLEAFRVGD 578
Query: 366 RLHQQYIE 373
+ H +Y E
Sbjct: 579 KSHPRYEE 586
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 478 bits (1229), Expect = e-133, Method: Compositional matrix adjust.
Identities = 249/609 (40%), Positives = 381/609 (62%), Gaps = 11/609 (1%)
Query: 8 HSSLLALLESCKSLKQALQIHGQIVHSGLN-HHISSSQLISFFALSGCKNGLFRSRILFS 66
H+ LL+LLE CK L QI Q++ +GL +SS+LI+F ALS + + +IL
Sbjct: 53 HNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKIL-K 111
Query: 67 QIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVS--PNNFTFPFVLNSCARLSS 124
I+NPNIF WN +RG+S S++P+E+ +LY ML G P++FT+P + CA L
Sbjct: 112 GIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRL 171
Query: 125 FKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLING 184
G I H++K LE + NA IH ++ G + NA KVF+ S RDLVS+N LING
Sbjct: 172 SSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLING 231
Query: 185 YAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVG 244
Y ++ E A+++++ M+ ++PD T + + S+C+ L D GK+F+ V +N +
Sbjct: 232 YKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN--GLR 289
Query: 245 SNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQ 304
+ L A+++M++KCG ++ A R+F + ++ +W++MISGY R G ++ +R+LFD
Sbjct: 290 MTIPLVNALMDMFSKCGDIHEARRIFDNLE-KRTIVSWTTMISGYARCGLLDVSRKLFDD 348
Query: 305 MDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFG 364
M+++D+V W AMI G Q AL LF +M++ PDE+TM+ L AC LGALD G
Sbjct: 349 MEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVG 408
Query: 365 KRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGL 424
+H+ YIE N+ L T+++DMYAKCG+I ALSVF+ I + + +II GL
Sbjct: 409 IWIHR-YIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGI--QTRNSLTYTAIIGGL 465
Query: 425 AQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLN-YGIKPQ 483
A HG T+I+ F EM G+ PD +TF+ +L AC HGG+++ G+ +F M + + + PQ
Sbjct: 466 ALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQ 525
Query: 484 MEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIAGQKLL 543
++HY MVDLL R G L+EA L++SMP +A++ +W ALL CR+H N ++GE A +KLL
Sbjct: 526 LKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLL 585
Query: 544 DLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTLHRFLASK 603
+L+P YVLL M E WE+A++ R++M++ G++K PG S IE NG + F+
Sbjct: 586 ELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRD 645
Query: 604 KSHPQTKEI 612
KS P++++I
Sbjct: 646 KSRPESEKI 654
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 476 bits (1226), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/638 (36%), Positives = 405/638 (63%), Gaps = 11/638 (1%)
Query: 7 EHSSLLALLESCKSLKQALQIHGQIVHSGLNHHISSSQLISFFALSGCKNGLFRSRILFS 66
++S +++L CK+ Q Q+H Q + G+ + + + + F S + + LF
Sbjct: 33 DYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFV 92
Query: 67 QIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLS-SF 125
+I P++ +WN +++G+S+ D E + LY +ML +G V+P++ TFPF+LN R +
Sbjct: 93 KIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEG-VTPDSHTFPFLLNGLKRDGGAL 151
Query: 126 KSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGY 185
G ++HCH++KFGL +L+++NAL+ YS+ G ++ A VF+ D+ S+N +I+GY
Sbjct: 152 ACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGY 211
Query: 186 AQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGC-VG 244
++KE ++ L +M+ + + P + T + + SAC+++ D + K+ H V + C
Sbjct: 212 NRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSE---CKTE 268
Query: 245 SNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQ 304
++ L+ A++N YA CG M++A R+F +M ++ +W+S++ GY G ++ AR FDQ
Sbjct: 269 PSLRLENALVNAYAACGEMDIAVRIFRSMK-ARDVISWTSIVKGYVERGNLKLARTYFDQ 327
Query: 305 MDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFG 364
M RD +SWT MI GY + G F+++LE+F +M+S G+ PDE TMV+VL AC LG+L+ G
Sbjct: 328 MPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG 387
Query: 365 KRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGL 424
+ + + YI+ ++ + A+IDMY KCG + A VF+ + + K + +++ GL
Sbjct: 388 EWI-KTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFT--WTAMVVGL 444
Query: 425 AQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESML-NYGIKPQ 483
A +G G+ +I VF +M+ M ++PD +T++ VL AC+H G+V++ ++FF M ++ I+P
Sbjct: 445 ANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPS 504
Query: 484 MEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIAGQKLL 543
+ HYGCMVD+L R G + EAY +++ MP + NS++W ALL A RLH + + E+A +K+L
Sbjct: 505 LVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKIL 564
Query: 544 DLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTLHRFLASK 603
+LEPD+GA Y LL N+ A RW++ R+VR+ + D I+K PG+S IE NG H F+A
Sbjct: 565 ELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGD 624
Query: 604 KSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVVFDVDE 641
KSH Q++EI + L+++ + A Y+P+T +++F+ +
Sbjct: 625 KSHLQSEEIYMKLEELAQESTFAAYLPDTSELLFEAGD 662
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 474 bits (1220), Expect = e-133, Method: Compositional matrix adjust.
Identities = 264/764 (34%), Positives = 432/764 (56%), Gaps = 79/764 (10%)
Query: 26 QIHGQIVHSGLNHHIS--SSQLISFFALSGCKNGLFRSRILFSQIDNPNIFIWNTLMRGY 83
Q+H Q + G +S +S + ++ S K+G R +F ++ N+ W TL+ GY
Sbjct: 114 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDG----RKVFDEMKERNVVTWTTLISGY 169
Query: 84 SRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGCQIHCHIIKFGLEFD 143
+R+ E L L+ M ++G PN+FTF L A G Q+H ++K GL+
Sbjct: 170 ARNSMNDEVLTLFMRMQNEG-TQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT 228
Query: 144 LFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVKEPCPALWLFRKMQD 203
+ + N+LI+ Y G + A +F+ + + +V++N++I+GYA AL +F M+
Sbjct: 229 IPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRL 288
Query: 204 SCIQPDAFTFVAMFSACTELNDPRIGKQFHAVV--------------------------- 236
+ ++ +F ++ C L + R +Q H V
Sbjct: 289 NYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLD 348
Query: 237 ----YKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTM------------------- 273
+K +GCVG N++ TA+I+ + + A +FS M
Sbjct: 349 ALRLFKEIGCVG-NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL 407
Query: 274 ---------------GMSKSTAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMIS 318
+S+ ++++ Y + GK+E A ++F +D +D+V+W+AM++
Sbjct: 408 PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLA 467
Query: 319 GYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGA-LDFGKRLHQQYIENVVF 377
GY+Q G A+++FG++ GI P+E T ++L C A + GK+ H I++ +
Sbjct: 468 GYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRL- 526
Query: 378 GRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVF 437
++ +++A++ MYAK G+I++A VF + + K + +NS+ISG AQHG ++ VF
Sbjct: 527 DSSLCVSSALLTMYAKKGNIESAEEVFKR--QREKDLVSWNSMISGYAQHGQAMKALDVF 584
Query: 438 REMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESML-NYGIKPQMEHYGCMVDLLAR 496
+EM+ +K DGVTF+ V AC+H GLVEEG+++F+ M+ + I P EH CMVDL +R
Sbjct: 585 KEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSR 644
Query: 497 DGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIAGQKLLDLEPDHGAHYVLL 556
G+L++A +I++MP A S IWR +LAACR+H+ ++G +A +K++ ++P+ A YVLL
Sbjct: 645 AGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLL 704
Query: 557 SNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTLHRFLASKKSHPQTKEIELML 616
SNM AE+ W+E +VRKLM++ ++K PG+S+IE + FLA +SHP +I + L
Sbjct: 705 SNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKL 764
Query: 617 KDMTMKLKSAGYVPNTVQVVFDVDEEEKETVVSYHSEKLALAFGLINSRSKETIRITKNL 676
+D++ +LK GY P+T V+ D+D+E KE V++ HSE+LA+AFGLI + + I KNL
Sbjct: 765 EDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNL 824
Query: 677 RICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKK-GNCSCMDFW 719
R+CGDCHL KL+++I REI+VRD+ RFH F G CSC DFW
Sbjct: 825 RVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/469 (27%), Positives = 217/469 (46%), Gaps = 44/469 (9%)
Query: 58 LFRSRILFSQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLN 117
L+ + LF + + + +L+ G+SR QEA L+ ++ G+ + F VL
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGM-EMDCSIFSSVLK 101
Query: 118 SCARLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVS 177
A L G Q+HC IKFG D+ + +L+ Y + KVF+ R++V+
Sbjct: 102 VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVT 161
Query: 178 YNTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVY 237
+ TLI+GYA+ L LF +MQ+ QP++FTF A E G Q H VV
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVV 221
Query: 238 KNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIER 297
KN + + + ++IN+Y KCG + A +F + KS W+SMISGY G
Sbjct: 222 KN--GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEV-KSVVTWNSMISGYAANG---- 274
Query: 298 ARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVG 357
DL +AL +F M + E + +V++ C
Sbjct: 275 ----------LDL-----------------EALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Query: 358 LGALDFGKRLHQQYIE-NVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSL 416
L L F ++LH ++ +F +NI TA++ Y+KC ++ AL +F +I VS
Sbjct: 308 LKELRFTEQLHCSVVKYGFLFDQNI--RTALMVAYSKCTAMLDALRLFKEIGCVGNVVS- 364
Query: 417 FNSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESML 476
+ ++ISG Q+ E ++ +F EM+ G++P+ T+ +L A E Q ++
Sbjct: 365 WTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKT-- 422
Query: 477 NYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAA 525
NY + ++D + G+++EA + + D + V W A+LA
Sbjct: 423 NYERSSTVGT--ALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAG 468
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 112/238 (47%), Gaps = 4/238 (1%)
Query: 288 GYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVT 347
G ++ A LFD+ RD S+ +++ G+S+ G +A LF + LG+ D
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 348 MVAVLRACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKI 407
+VL+ L FG++LH Q I+ F ++ + T+++D Y K + VF ++
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIK-FGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 408 PKNLKTVSLFNSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEE 467
+ + V + ++ISG A++ + + + +F M+ G +P+ TF L + G+
Sbjct: 155 KE--RNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGR 212
Query: 468 GKQFFESMLNYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAA 525
G Q ++ G+ + +++L + G + +A L + V W ++++
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKS-VVTWNSMISG 269
Score = 41.6 bits (96), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 20 SLKQALQIHGQIVHSGLNHHIS-SSQLISFFALSGCKNGLFRSRILFSQIDNPNIFIWNT 78
S+ Q Q HG + S L+ + SS L++ +A G + + +F + ++ WN+
Sbjct: 510 SMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKG---NIESAEEVFKRQREKDLVSWNS 566
Query: 79 LMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGCQIHCHIIKF 138
++ GY++ +AL ++ M K V + TF V +C H +++
Sbjct: 567 MISGYAQHGQAMKALDVFKEM-KKRKVKMDGVTFIGVFAACT-----------HAGLVEE 614
Query: 139 GLE-FDLFIRN-----------ALIHFYSIFGYINNAHKVFE 168
G + FD+ +R+ ++ YS G + A KV E
Sbjct: 615 GEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIE 656
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 468 bits (1203), Expect = e-131, Method: Compositional matrix adjust.
Identities = 255/629 (40%), Positives = 373/629 (59%), Gaps = 30/629 (4%)
Query: 112 FPFVLNSCARLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGY----INNAHKVF 167
FP + N+C + QIH IK G D ++ F + ++ AHK+F
Sbjct: 27 FPQI-NNCRTIRDLS---QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIF 82
Query: 168 EGSLARDLVSYNTLINGYAQVKEPCP--ALWLFRKM-QDSCIQPDAFTFVAMFSACTELN 224
R+ S+NT+I G+++ E A+ LF +M D ++P+ FTF ++ AC +
Sbjct: 83 NQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTG 142
Query: 225 DPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAA--- 281
+ GKQ H + K G + + + ++ MY CG M A +F + K
Sbjct: 143 KIQEGKQIHGLALKY--GFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTD 200
Query: 282 ----------WSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALE 331
W+ MI GY R G + AR LFD+M QR +VSW MISGYS G F A+E
Sbjct: 201 RRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVE 260
Query: 332 LFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMY 391
+F +M+ I P+ VT+V+VL A LG+L+ G+ LH Y E+ + L +A+IDMY
Sbjct: 261 VFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHL-YAEDSGIRIDDVLGSALIDMY 319
Query: 392 AKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFREMELMGLKPDGVT 451
+KCG I+ A+ VF ++P+ + V ++++I+G A HG +I F +M G++P V
Sbjct: 320 SKCGIIEKAIHVFERLPR--ENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 377
Query: 452 FVTVLCACSHGGLVEEGKQFFESMLNY-GIKPQMEHYGCMVDLLARDGRLDEAYGLIQSM 510
++ +L ACSHGGLVEEG+++F M++ G++P++EHYGCMVDLL R G LDEA I +M
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 511 PYDANSVIWRALLAACRLHRNAKIGEIAGQKLLDLEPDHGAHYVLLSNMLAETYRWEEAR 570
P + VIW+ALL ACR+ N ++G+ L+D+ P YV LSNM A W E
Sbjct: 438 PIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVS 497
Query: 571 QVRKLMDDSGIQKPPGWSYIEHNGTLHRFLASKKSHPQTKEIELMLKDMTMKLKSAGYVP 630
++R M + I+K PG S I+ +G LH F+ SHP+ KEI ML +++ KL+ AGY P
Sbjct: 498 EMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRP 557
Query: 631 NTVQVVFDVDEEEKETVVSYHSEKLALAFGLINSRSKETIRITKNLRICGDCHLAFKLLS 690
T QV+ +++EE+KE V+ YHSEK+A AFGLI++ + IRI KNLRIC DCH + KL+S
Sbjct: 558 ITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLIS 617
Query: 691 EIYRREIMVRDAIRFHLFKKGNCSCMDFW 719
++Y+R+I VRD RFH F+ G+CSCMD+W
Sbjct: 618 KVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 159 bits (403), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 124/509 (24%), Positives = 218/509 (42%), Gaps = 119/509 (23%)
Query: 11 LLALLESCKSLKQALQIHGQIVHSG-LNHHISSSQLISFFALSGCKN-GLFRSRILFSQI 68
L + +C++++ QIH + SG + +++++++ F A S + L + +F+Q+
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM 85
Query: 69 DNPNIFIWNTLMRGYSRSDSPQE--ALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFK 126
N F WNT++RG+S SD + A+ L+ M+S V PN FTFP VL +CA+ +
Sbjct: 86 PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145
Query: 127 SGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVF------------------E 168
G QIH +K+G D F+ + L+ Y + G++ +A +F +
Sbjct: 146 EGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRD 205
Query: 169 GSLA---------------------------RDLVSYNTLINGYAQVKEPCPALWLFRKM 201
G + R +VS+NT+I+GY+ A+ +FR+M
Sbjct: 206 GEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM 265
Query: 202 QDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCG 261
+ I+P+ T V++ A + L +G+ H +Y + + +L +A+I+MY+KCG
Sbjct: 266 KKGDIRPNYVTLVSVLPAISRLGSLELGEWLH--LYAEDSGIRIDDVLGSALIDMYSKCG 323
Query: 262 LMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYS 321
++ A VF + ++ WS+MI+G+ G
Sbjct: 324 IIEKAIHVFERLP-RENVITWSAMINGFAIHG---------------------------- 354
Query: 322 QVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRNI 381
Q G A++ F KM G+ P +V + +L AC G ++ G+R Q + I
Sbjct: 355 QAG---DAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRI 411
Query: 382 FLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFREME 441
++D+ + G +D A +P
Sbjct: 412 EHYGCMVDLLGRSGLLDEAEEFILNMP--------------------------------- 438
Query: 442 LMGLKPDGVTFVTVLCACSHGGLVEEGKQ 470
+KPD V + +L AC G VE GK+
Sbjct: 439 ---IKPDDVIWKALLGACRMQGNVEMGKR 464
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 154/330 (46%), Gaps = 20/330 (6%)
Query: 48 FFALSGCKNGLFRSRILFSQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSP 107
+ L CK +R+LF ++ ++ WNT++ GYS + ++A+ ++ M KG + P
Sbjct: 218 YMRLGDCKA----ARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM-KKGDIRP 272
Query: 108 NNFTFPFVLNSCARLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVF 167
N T VL + +RL S + G +H + G+ D + +ALI YS G I A VF
Sbjct: 273 NYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVF 332
Query: 168 EGSLARDLVSYNTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPR 227
E ++++++ +ING+A + A+ F KM+ + ++P ++ + +AC+
Sbjct: 333 ERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVE 392
Query: 228 IGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMIS 287
G+++ + + G + + ++++ + GL++ AE M + W +++
Sbjct: 393 EGRRYFSQMVSVDG-LEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLG 451
Query: 288 GYTREGKIE---RARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPD 344
+G +E R + M D ++ A+ + Y+ G +S+ E+ +M+ I D
Sbjct: 452 ACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKD 511
Query: 345 EVTMVAVLRACVGLGALDFGKRLHQQYIEN 374
G +D LH+ +E+
Sbjct: 512 P-----------GCSLIDIDGVLHEFVVED 530
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 467 bits (1202), Expect = e-130, Method: Compositional matrix adjust.
Identities = 250/609 (41%), Positives = 369/609 (60%), Gaps = 14/609 (2%)
Query: 116 LNSCARLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHF---YSIFGYINNAHKVFEGSLA 172
L C++ K QIH ++K GL D + + F + ++ A VF+G
Sbjct: 21 LQRCSKQEELK---QIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 173 RDLVSYNTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQF 232
D +N +I G++ EP +L L+++M S +A+TF ++ AC+ L+ Q
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 233 HAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTRE 292
HA + K LG +++ ++IN YA G +A +F + +W+S+I GY +
Sbjct: 138 HAQITK-LG-YENDVYAVNSLINSYAVTGNFKLAHLLFDRIP-EPDDVSWNSVIKGYVKA 194
Query: 293 GKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVL 352
GK++ A LF +M +++ +SWT MISGY Q +AL+LF +M++ + PD V++ L
Sbjct: 195 GKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANAL 254
Query: 353 RACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLK 412
AC LGAL+ GK +H Y+ + L +IDMYAKCG ++ AL VF I K K
Sbjct: 255 SACAQLGALEQGKWIHS-YLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK--K 311
Query: 413 TVSLFNSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFF 472
+V + ++ISG A HG G +I+ F EM+ MG+KP+ +TF VL ACS+ GLVEEGK F
Sbjct: 312 SVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF 371
Query: 473 ESM-LNYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRN 531
SM +Y +KP +EHYGC+VDLL R G LDEA IQ MP N+VIW ALL ACR+H+N
Sbjct: 372 YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKN 431
Query: 532 AKIGEIAGQKLLDLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIE 591
++GE G+ L+ ++P HG YV +N+ A +W++A + R+LM + G+ K PG S I
Sbjct: 432 IELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTIS 491
Query: 592 HNGTLHRFLASKKSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVVFD-VDEEEKETVVSY 650
GT H FLA +SHP+ ++I+ + M KL+ GYVP +++ D VD++E+E +V
Sbjct: 492 LEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQ 551
Query: 651 HSEKLALAFGLINSRSKETIRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKK 710
HSEKLA+ +GLI ++ IRI KNLR+C DCH KL+S+IY+R+I++RD RFH F+
Sbjct: 552 HSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRD 611
Query: 711 GNCSCMDFW 719
G CSC D+W
Sbjct: 612 GKCSCGDYW 620
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 462 bits (1189), Expect = e-129, Method: Compositional matrix adjust.
Identities = 274/787 (34%), Positives = 430/787 (54%), Gaps = 85/787 (10%)
Query: 10 SLLALLESCKSLKQ-----------ALQIHGQIVHSGLNHHIS-SSQLISFFALSGCKNG 57
SL LLE C +L Q A +H +++ SGL + + L++ ++ +G
Sbjct: 8 SLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYA-- 65
Query: 58 LFRSRILFSQIDNPNIFIWNTLMRGYSRS---DS--------PQEALVLYTSM------- 99
+R LF ++ F WNT++ YS+ DS PQ V +T+M
Sbjct: 66 -LHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNI 124
Query: 100 ------------LSKGIVSPNNFTFPFVLNSCARLSSFKSGCQIHCHIIKFGLEFDLFIR 147
+ K + P FT VL S A ++G ++H I+K GL ++ +
Sbjct: 125 GQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVS 184
Query: 148 NALIHFYS----------IF---------------------GYINNAHKVFEGSLARDLV 176
N+L++ Y+ +F G ++ A FE RD+V
Sbjct: 185 NSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIV 244
Query: 177 SYNTLINGYAQVKEPCPALWLFRKM-QDSCIQPDAFTFVAMFSACTELNDPRIGKQFHA- 234
++N++I+G+ Q AL +F KM +DS + PD FT ++ SAC L IGKQ H+
Sbjct: 245 TWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSH 304
Query: 235 VVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSK-STAAWSSMISGYTREG 293
+V G ++ A+I+MY++CG + A R+ G +++++ GY + G
Sbjct: 305 IVTTGFDISG---IVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLG 361
Query: 294 KIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLR 353
+ +A+ +F + RD+V+WTAMI GY Q G + +A+ LF M G P+ T+ A+L
Sbjct: 362 DMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLS 421
Query: 354 ACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKT 413
L +L GK++H +++ ++ ++ A+I MYAK G+I +A F I T
Sbjct: 422 VASSLASLSHGKQIHGSAVKSGEI-YSVSVSNALITMYAKAGNITSASRAFDLIRCERDT 480
Query: 414 VSLFNSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFE 473
VS + S+I LAQHG E ++ +F M + GL+PD +T+V V AC+H GLV +G+Q+F+
Sbjct: 481 VS-WTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFD 539
Query: 474 SMLNYG-IKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNA 532
M + I P + HY CMVDL R G L EA I+ MP + + V W +LL+ACR+H+N
Sbjct: 540 MMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNI 599
Query: 533 KIGEIAGQKLLDLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIEH 592
+G++A ++LL LEP++ Y L+N+ + +WEEA ++RK M D ++K G+S+IE
Sbjct: 600 DLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEV 659
Query: 593 NGTLHRFLASKKSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVVFDVDEEEKETVVSYHS 652
+H F +HP+ EI + +K + ++K GYVP+T V+ D++EE KE ++ +HS
Sbjct: 660 KHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHS 719
Query: 653 EKLALAFGLINSRSKETIRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKKGN 712
EKLA+AFGLI++ K T+RI KNLR+C DCH A K +S++ REI+VRD RFH FK G
Sbjct: 720 EKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGF 779
Query: 713 CSCMDFW 719
CSC D+W
Sbjct: 780 CSCRDYW 786
Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 159/339 (46%), Gaps = 42/339 (12%)
Query: 208 PDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGC--VGSNML----LKTAVINMYAKCG 261
P + + CT L + K + + C + S ++ L ++N+Y+K G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 262 LMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYS 321
A ++F M + ++ +W++++S Y++ G ++ + FDQ+ QRD VSWT MI GY
Sbjct: 64 YALHARKLFDEMPL-RTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYK 122
Query: 322 QVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRNI 381
+G + +A+ + G M GI P + T+ VL + ++ GK++H +I + N+
Sbjct: 123 NIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVH-SFIVKLGLRGNV 181
Query: 382 FLTTAVIDMYAKCGS-------------------------------IDTALSVFYKIPKN 410
++ ++++MYAKCG +D A++ F ++ +
Sbjct: 182 SVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE- 240
Query: 411 LKTVSLFNSIISGLAQHGLGETSIAVFREMELMG-LKPDGVTFVTVLCACSHGGLVEEGK 469
+ + +NS+ISG Q G ++ +F +M L PD T +VL AC++ + GK
Sbjct: 241 -RDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGK 299
Query: 470 QFFESMLNYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQ 508
Q ++ G ++ + +R G ++ A LI+
Sbjct: 300 QIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIE 338
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust.
Identities = 260/783 (33%), Positives = 419/783 (53%), Gaps = 75/783 (9%)
Query: 5 VLEHSSLLALLESCKSLKQALQIHGQIVHSGLNHHISS-SQLISFFALSGCKNGLFRSRI 63
++ ++ L + S+ Q H QI+ G + IS ++L + G ++ +R
Sbjct: 17 LISKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLG---AIYYARD 73
Query: 64 LFSQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLS 123
+F + P++F++N LMRG+S ++SP +L ++ + + PN+ T+ F +++ +
Sbjct: 74 IFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFR 133
Query: 124 SFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLIN 183
++G IH + G + +L + + ++ Y F + +A KVF+ +D + +NT+I+
Sbjct: 134 DDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMIS 193
Query: 184 GYAQVKEPCPALWLFRKM-QDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGC 242
GY + + ++ +FR + +SC + D T + + A EL + R+G Q H++ K GC
Sbjct: 194 GYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKT-GC 252
Query: 243 VGSNMLLK------------------------------TAVINMYAKCGLMNMAERVFST 272
+ +L A+I+ Y G ++ +F
Sbjct: 253 YSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKE 312
Query: 273 MGMSKSTAAWSSMIS-----------------------------------GYTREGKIER 297
+ +S + S+++S Y++ +IE
Sbjct: 313 LMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIES 372
Query: 298 ARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVG 357
AR+LFD+ ++ L SW AMISGY+Q G A+ LF +M+ P+ VT+ +L AC
Sbjct: 373 ARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQ 432
Query: 358 LGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLF 417
LGAL GK +H + + F +I+++TA+I MYAKCGSI A +F + K K +
Sbjct: 433 LGALSLGKWVHD-LVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTK--KNEVTW 489
Query: 418 NSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLN 477
N++ISG HG G+ ++ +F EM G+ P VTF+ VL ACSH GLV+EG + F SM++
Sbjct: 490 NTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIH 549
Query: 478 -YGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGE 536
YG +P ++HY CMVD+L R G L A I++M + S +W LL ACR+H++ +
Sbjct: 550 RYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLAR 609
Query: 537 IAGQKLLDLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTL 596
+KL +L+PD+ ++VLLSN+ + + +A VR+ + K PG++ IE T
Sbjct: 610 TVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETP 669
Query: 597 HRFLASKKSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVVFDVDEEEKETVVSYHSEKLA 656
H F + +SHPQ KEI L+ + K++ AGY P T + DV+EEE+E +V HSE+LA
Sbjct: 670 HVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLA 729
Query: 657 LAFGLINSRSKETIRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKKGNCSCM 716
+AFGLI + IRI KNLR+C DCH KL+S+I R I+VRDA RFH FK G CSC
Sbjct: 730 IAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCG 789
Query: 717 DFW 719
D+W
Sbjct: 790 DYW 792
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust.
Identities = 247/687 (35%), Positives = 383/687 (55%), Gaps = 28/687 (4%)
Query: 52 SGCKNGLFRSRILFSQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFT 111
S C++ L +R +F ++ ++ WN+++ Y++ P+ AL +++ M ++ P+N T
Sbjct: 173 SRCRS-LSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNIT 231
Query: 112 FPFVLNSCARLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSL 171
VL CA L + G Q+HC + + ++F+ N L+ Y+ G ++ A+ VF
Sbjct: 232 LVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMS 291
Query: 172 ARDLVSYNTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSA------------ 219
+D+VS+N ++ GY+Q+ A+ LF KMQ+ I+ D T+ A S
Sbjct: 292 VKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALG 351
Query: 220 -CTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKS 278
C ++ I ++ GC L+ I+ YA +++ + G
Sbjct: 352 VCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKN-----GHGDE 406
Query: 279 TAAWSSMISGYTREGKIERARQLFDQMD--QRDLVSWTAMISGYSQVGGFSQALELFGKM 336
+ +I Y + K++ AR +FD + +RD+V+WT MI GYSQ G ++ALEL +M
Sbjct: 407 NMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM 466
Query: 337 --ESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKC 394
E P+ T+ L AC L AL GK++H + N +F++ +IDMYAKC
Sbjct: 467 FEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKC 526
Query: 395 GSIDTALSVFYKI-PKNLKTVSLFNSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFV 453
GSI A VF + KN T + S+++G HG GE ++ +F EM +G K DGVT +
Sbjct: 527 GSISDARLVFDNMMAKNEVT---WTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLL 583
Query: 454 TVLCACSHGGLVEEGKQFFESMLN-YGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPY 512
VL ACSH G++++G ++F M +G+ P EHY C+VDLL R GRL+ A LI+ MP
Sbjct: 584 VVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPM 643
Query: 513 DANSVIWRALLAACRLHRNAKIGEIAGQKLLDLEPDHGAHYVLLSNMLAETYRWEEARQV 572
+ V+W A L+ CR+H ++GE A +K+ +L +H Y LLSN+ A RW++ ++
Sbjct: 644 EPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRI 703
Query: 573 RKLMDDSGIQKPPGWSYIEHNGTLHRFLASKKSHPQTKEIELMLKDMTMKLKSAGYVPNT 632
R LM G++K PG S++E F K+HP KEI +L D ++K GYVP T
Sbjct: 704 RSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPET 763
Query: 633 VQVVFDVDEEEKETVVSYHSEKLALAFGLINSRSKETIRITKNLRICGDCHLAFKLLSEI 692
+ DVD+EEK+ ++ HSEKLALA+G++ + IRITKNLR+CGDCH AF +S I
Sbjct: 764 GFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRI 823
Query: 693 YRREIMVRDAIRFHLFKKGNCSCMDFW 719
+I++RD+ RFH FK G+CSC +W
Sbjct: 824 IDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 261 bits (666), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 167/536 (31%), Positives = 278/536 (51%), Gaps = 32/536 (5%)
Query: 14 LLESCKSLKQALQIHGQIVHSGLNHHISSSQLISFFALSGCKNGLFRSRILFSQIDNPNI 73
+ CK++ Q IH +++ G+ +S LIS + GC + F D +
Sbjct: 34 FIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSD-AGV 92
Query: 74 FIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGCQIHC 133
+ WN+L+R Y + + L L+ M S +P+N+TFPFV +C +SS + G H
Sbjct: 93 YHWNSLIRSYGDNGCANKCLYLFGLMHSLSW-TPDNYTFPFVFKACGEISSVRCGESAHA 151
Query: 134 HIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVKEPCP 193
+ G ++F+ NAL+ YS +++A KVF+ D+VS+N++I YA++ +P
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV 211
Query: 194 ALWLFRKMQDS-CIQPDAFTFVAMFSACTELNDPRIGKQFH--AVVYKNLGCVGSNMLLK 250
AL +F +M + +PD T V + C L +GKQ H AV + + NM +
Sbjct: 212 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMI----QNMFVG 267
Query: 251 TAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQR-- 308
+++MYAKCG+M+ A VFS M + K +W++M++GY++ G+ E A +LF++M +
Sbjct: 268 NCLVDMYAKCGMMDEANTVFSNMSV-KDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKI 326
Query: 309 --DLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKR 366
D+V+W+A ISGY+Q G +AL + +M S GI P+EVT+++VL C +GAL GK
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386
Query: 367 LHQQYIENVV------FGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSI 420
+H I+ + G + +IDMYAKC +DTA ++F + + V + +
Sbjct: 387 IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVM 446
Query: 421 ISGLAQHGLGETSIAVFREM--ELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLNY 478
I G +QHG ++ + EM E +P+ T L AC+ + GKQ Y
Sbjct: 447 IGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHA----Y 502
Query: 479 GIKPQMEHY-----GCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLH 529
++ Q C++D+ A+ G + +A + +M N V W +L+ +H
Sbjct: 503 ALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMH 557
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 456 bits (1172), Expect = e-127, Method: Compositional matrix adjust.
Identities = 247/649 (38%), Positives = 374/649 (57%), Gaps = 51/649 (7%)
Query: 76 WNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGCQIHCHI 135
WN +R + E++ LY SML G SP+ F+FPF+L SCA LS SG Q+HCH+
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSG-SSPDAFSFPFILKSCASLSLPVSGQQLHCHV 79
Query: 136 IKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVS--YNTLINGYAQVKEPCP 193
K G E + F+ ALI Y G + +A KVFE + +S YN LI+GY +
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 194 ALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAV 253
A ++FR+M+++ + D+ T + + CT +G+ H K G + S + + +
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVK--GGLDSEVAVLNSF 197
Query: 254 INMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQRDLVSW 313
I MY KC G +E R+LFD+M + L++W
Sbjct: 198 ITMYMKC--------------------------------GSVEAGRRLFDEMPVKGLITW 225
Query: 314 TAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIE 373
A+ISGYSQ G LEL+ +M+S G+ PD T+V+VL +C LGA G + + +E
Sbjct: 226 NAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEV-GKLVE 284
Query: 374 NVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETS 433
+ F N+F++ A I MYA+CG++ A +VF +P +K++ + ++I HG+GE
Sbjct: 285 SNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP--VKSLVSWTAMIGCYGMHGMGEIG 342
Query: 434 IAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESM-LNYGIKPQMEHYGCMVD 492
+ +F +M G++PDG FV VL ACSH GL ++G + F +M Y ++P EHY C+VD
Sbjct: 343 LMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVD 402
Query: 493 LLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIAGQKLLDLEPDHGAH 552
LL R GRLDEA I+SMP + + +W ALL AC++H+N + E+A K+++ EP++ +
Sbjct: 403 LLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGY 462
Query: 553 YVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTLHRFLASKKSHPQTKEI 612
YVL+SN+ +++ E ++R +M + +K PG+SY+EH G +H FLA +SH QT+E+
Sbjct: 463 YVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEV 522
Query: 613 ELMLKDM-TMKLKSAGYVPNTVQVVFDVDE-EEKETVVSYHSEKLALAFGLINSRSKETI 670
ML ++ T ++ AG + D D EE + HSE+LA+AFG++NS I
Sbjct: 523 HRMLDELETSVMELAGNM--------DCDRGEEVSSTTREHSERLAIAFGILNSIPGTEI 574
Query: 671 RITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKKGNCSCMDFW 719
+ KNLR+C DCH+ K +S+I R+ +VRDA RFH FK G CSC D+W
Sbjct: 575 LVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 123/279 (44%), Gaps = 4/279 (1%)
Query: 27 IHGQIVHSGLNHHISSSQLISFFALSGCKNGLFRSRILFSQIDNPNIFIWNTLMRGYSRS 86
+HGQ V GL+ ++ L SF + + R LF ++ + WN ++ GYS++
Sbjct: 178 LHGQCVKGGLDSEVAV--LNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQN 235
Query: 87 DSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGCQIHCHIIKFGLEFDLFI 146
+ L LY M S G V P+ FT VL+SCA L + K G ++ + G ++F+
Sbjct: 236 GLAYDVLELYEQMKSSG-VCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFV 294
Query: 147 RNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVKEPCPALWLFRKMQDSCI 206
NA I Y+ G + A VF+ + LVS+ +I Y L LF M I
Sbjct: 295 SNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGI 354
Query: 207 QPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMA 266
+PD FV + SAC+ G + + + + + ++++ + G ++ A
Sbjct: 355 RPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYK-LEPGPEHYSCLVDLLGRAGRLDEA 413
Query: 267 ERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQM 305
+M + A W +++ ++ A F ++
Sbjct: 414 MEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKV 452
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 454 bits (1169), Expect = e-127, Method: Compositional matrix adjust.
Identities = 253/728 (34%), Positives = 410/728 (56%), Gaps = 56/728 (7%)
Query: 10 SLLALLESCKSLK--QALQIHGQIVHSGLNHHISSSQLI-SFFALSGCKNGLFRSRILFS 66
+L++++ +C +L + L + Q+ GL +S +I + A+ G L S++L
Sbjct: 201 TLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLG 260
Query: 67 QIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFK 126
++ WNT++ +++ EAL M+ +G V P+ FT VL +C+ L +
Sbjct: 261 SFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG-VEPDEFTISSVLPACSHLEMLR 319
Query: 127 SGCQIHCHIIKFG-LEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGY 185
+G ++H + +K G L+ + F+ +AL+ Y + + +VF+G R + +N +I GY
Sbjct: 320 TGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGY 379
Query: 186 AQVKEPCPALWLFRKMQDSC-IQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVG 244
+Q + AL LF M++S + ++ T + AC + H V K
Sbjct: 380 SQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR----- 434
Query: 245 SNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQ 304
G+ + ++++ Y+R GKI+ A ++F +
Sbjct: 435 -----------------------------GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGK 465
Query: 305 MDQRDLVSWTAMISGYSQVGGFSQALELFGKMESL-----------GIHPDEVTMVAVLR 353
M+ RDLV+W MI+GY AL L KM++L + P+ +T++ +L
Sbjct: 466 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 525
Query: 354 ACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKT 413
+C L AL GK +H I+N + ++ + +A++DMYAKCG + + VF +IP+ K
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNL-ATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQ--KN 582
Query: 414 VSLFNSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFE 473
V +N II HG G+ +I + R M + G+KP+ VTF++V ACSH G+V+EG + F
Sbjct: 583 VITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFY 642
Query: 474 SM-LNYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSV-IWRALLAACRLHRN 531
M +YG++P +HY C+VDLL R GR+ EAY L+ MP D N W +LL A R+H N
Sbjct: 643 VMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNN 702
Query: 532 AKIGEIAGQKLLDLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIE 591
+IGEIA Q L+ LEP+ +HYVLL+N+ + W++A +VR+ M + G++K PG S+IE
Sbjct: 703 LEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIE 762
Query: 592 HNGTLHRFLASKKSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVVFDVDEEEKETVVSYH 651
H +H+F+A SHPQ++++ L+ + +++ GYVP+T V+ +V+E+EKE ++ H
Sbjct: 763 HGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGH 822
Query: 652 SEKLALAFGLINSRSKETIRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKKG 711
SEKLA+AFG++N+ IR+ KNLR+C DCHLA K +S+I REI++RD RFH FK G
Sbjct: 823 SEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNG 882
Query: 712 NCSCMDFW 719
CSC D+W
Sbjct: 883 TCSCGDYW 890
Score = 179 bits (455), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 221/468 (47%), Gaps = 52/468 (11%)
Query: 71 PNIFI--------WNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARL 122
P+IFI W L+R RS+ +EA++ Y M+ GI P+N+ FP +L + A L
Sbjct: 52 PSIFISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGI-KPDNYAFPALLKAVADL 110
Query: 123 SSFKSGCQIHCHIIKFGLEFD-LFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTL 181
+ G QIH H+ KFG D + + N L++ Y G +KVF+ R+ VS+N+L
Sbjct: 111 QDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSL 170
Query: 182 INGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPR---IGKQFHAVVYK 238
I+ ++ AL FR M D ++P +FT V++ +AC+ L P +GKQ HA +
Sbjct: 171 ISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR 230
Query: 239 NLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERA 298
G L + +IN ++++ Y + GK+ +
Sbjct: 231 K----GE---LNSFIIN----------------------------TLVAMYGKLGKLASS 255
Query: 299 RQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGL 358
+ L RDLV+W ++S Q +ALE +M G+ PDE T+ +VL AC L
Sbjct: 256 KVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHL 315
Query: 359 GALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFN 418
L GK LH ++N N F+ +A++DMY C + + VF + + + L+N
Sbjct: 316 EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFD--RKIGLWN 373
Query: 419 SIISGLAQHGLGETSIAVFREM-ELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLN 477
++I+G +Q+ + ++ +F M E GL + T V+ AC G + ++
Sbjct: 374 AMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVK 433
Query: 478 YGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAA 525
G+ ++D+ +R G++D A + M D + V W ++
Sbjct: 434 RGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITG 480
Score = 62.8 bits (151), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 114/242 (47%), Gaps = 9/242 (3%)
Query: 313 WTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYI 372
W ++ + +A+ + M LGI PD A+L+A L ++ GK++H
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 373 ENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGLGET 432
+ ++ + ++++Y KCG VF +I + VS +NS+IS L E
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISER-NQVS-WNSLISSLCSFEKWEM 182
Query: 433 SIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLNYGI-KPQMEHY--GC 489
++ FR M ++P T V+V+ ACS+ + EG + + YG+ K ++ +
Sbjct: 183 ALEAFRCMLDENVEPSSFTLVSVVTACSNLPM-PEGLMMGKQVHAYGLRKGELNSFIINT 241
Query: 490 MVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAA-CRLHRNAKIGEIAGQKLLD-LEP 547
+V + + G+L + L+ S + V W +L++ C+ + + E + +L+ +EP
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFG-GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 300
Query: 548 DH 549
D
Sbjct: 301 DE 302
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 453 bits (1166), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/615 (38%), Positives = 379/615 (61%), Gaps = 20/615 (3%)
Query: 115 VLNSCARLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHFY---SIFGYINN----AHKVF 167
+L SC+ S K IH +++ L D+F+ + L+ S F N A+ +F
Sbjct: 18 LLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIF 74
Query: 168 EGSLARDLVSYNTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPR 227
+L +N LI ++ EP A + +M S I PD TF + A +E+
Sbjct: 75 SQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVL 134
Query: 228 IGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMIS 287
+G+Q H+ + + G +++ ++ ++++MYA CG + A R+F MG + +W+SM++
Sbjct: 135 VGEQTHSQIVR-FG-FQNDVYVENSLVHMYANCGFIAAAGRIFGQMGF-RDVVSWTSMVA 191
Query: 288 GYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVT 347
GY + G +E AR++FD+M R+L +W+ MI+GY++ F +A++LF M+ G+ +E
Sbjct: 192 GYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETV 251
Query: 348 MVAVLRACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKI 407
MV+V+ +C LGAL+FG+R ++ Y+ N+ L TA++DM+ +CG I+ A+ VF +
Sbjct: 252 MVSVISSCAHLGALEFGERAYE-YVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGL 310
Query: 408 PKNLKTVSL-FNSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVE 466
P+ T SL ++SII GLA HG ++ F +M +G P VTF VL ACSHGGLVE
Sbjct: 311 PE---TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVE 367
Query: 467 EGKQFFESML-NYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAA 525
+G + +E+M ++GI+P++EHYGC+VD+L R G+L EA I M N+ I ALL A
Sbjct: 368 KGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGA 427
Query: 526 CRLHRNAKIGEIAGQKLLDLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPP 585
C++++N ++ E G L+ ++P+H +YVLLSN+ A +W++ +R +M + ++KPP
Sbjct: 428 CKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPP 487
Query: 586 GWSYIEHNGTLHRF-LASKKSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVVFDVDEEEK 644
GWS IE +G +++F + + HP+ +I +++ K++ GY NT FDVDEEEK
Sbjct: 488 GWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEK 547
Query: 645 ETVVSYHSEKLALAFGLINSRSKETIRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIR 704
E+ + HSEKLA+A+G++ ++ TIRI KNLR+C DCH KL+SE+Y RE++VRD R
Sbjct: 548 ESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNR 607
Query: 705 FHLFKKGNCSCMDFW 719
FH F+ G CSC D+W
Sbjct: 608 FHHFRNGVCSCRDYW 622
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 202/408 (49%), Gaps = 23/408 (5%)
Query: 12 LALLESCKSLKQALQIHGQIVHSGLNHHISSSQLISFFALSGC---------KNGLFRSR 62
LALL+SC S IHG ++ + H+ S ++ L+ C N L +
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRT----HLISDVFVASRLLALCVDDSTFNKPTNLLGYAY 71
Query: 63 ILFSQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARL 122
+FSQI NPN+F++N L+R +S P +A YT ML K + P+N TFPF++ + + +
Sbjct: 72 GIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQML-KSRIWPDNITFPFLIKASSEM 130
Query: 123 SSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLI 182
G Q H I++FG + D+++ N+L+H Y+ G+I A ++F RD+VS+ +++
Sbjct: 131 ECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMV 190
Query: 183 NGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGC 242
GY + C + R+M D + FT+ M + + N K +
Sbjct: 191 AGYCK----CGMVENAREMFDEMPHRNLFTWSIMINGYAKNN--CFEKAIDLFEFMKREG 244
Query: 243 VGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAW---SSMISGYTREGKIERAR 299
V +N + +VI+ A G + ER + + S T ++++ + R G IE+A
Sbjct: 245 VVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAI 304
Query: 300 QLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLG 359
+F+ + + D +SW+++I G + G +A+ F +M SLG P +VT AVL AC G
Sbjct: 305 HVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGG 364
Query: 360 ALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKI 407
++ G +++ ++ + ++DM + G + A + K+
Sbjct: 365 LVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKM 412
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 450 bits (1158), Expect = e-125, Method: Compositional matrix adjust.
Identities = 251/739 (33%), Positives = 402/739 (54%), Gaps = 80/739 (10%)
Query: 19 KSLKQALQIHGQIVHSGLNHHISSSQLISFFALSGCKNGLFRSRILFSQIDNPNIFIWNT 78
KS QA Q+H Q + + H S+S +IS + L + +LF + +P + W +
Sbjct: 19 KSKSQAKQLHAQFIRTQSLSHTSASIVISIYT---NLKLLHEALLLFKTLKSPPVLAWKS 75
Query: 79 LMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGCQIHCHIIKF 138
++R ++ +AL + M + G P++ FP VL SC + + G +H I++
Sbjct: 76 VIRCFTDQSLFSKALASFVEMRASG-RCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRL 134
Query: 139 GLEFDLFIRNALIHFYS-------------------------------------IFGYIN 161
G++ DL+ NAL++ Y+ FG I+
Sbjct: 135 GMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFG-ID 193
Query: 162 NAHKVFEGSLARDLVSYNTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACT 221
+ +VFE +D+VSYNT+I GYAQ AL + R+M + ++PD+FT ++ +
Sbjct: 194 SVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFS 253
Query: 222 ELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAA 281
E D GK+ H V + + S++ + +++++MYAK
Sbjct: 254 EYVDVIKGKEIHGYVIRK--GIDSDVYIGSSLVDMYAK---------------------- 289
Query: 282 WSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGI 341
+IE + ++F ++ RD +SW ++++GY Q G +++AL LF +M + +
Sbjct: 290 ----------SARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKV 339
Query: 342 HPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTAL 401
P V +V+ AC L L GK+LH Y+ FG NIF+ +A++DMY+KCG+I A
Sbjct: 340 KPGAVAFSSVIPACAHLATLHLGKQLHG-YVLRGGFGSNIFIASALVDMYSKCGNIKAAR 398
Query: 402 SVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSH 461
+F ++ N+ + +II G A HG G ++++F EM+ G+KP+ V FV VL ACSH
Sbjct: 399 KIFDRM--NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSH 456
Query: 462 GGLVEEGKQFFESMLN-YGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWR 520
GLV+E +F SM YG+ ++EHY + DLL R G+L+EAY I M + +W
Sbjct: 457 VGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWS 516
Query: 521 ALLAACRLHRNAKIGEIAGQKLLDLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSG 580
LL++C +H+N ++ E +K+ ++ ++ YVL+ NM A RW+E ++R M G
Sbjct: 517 TLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKG 576
Query: 581 IQKPPGWSYIEHNGTLHRFLASKKSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVVFDVD 640
++K P S+IE H F++ +SHP +I LK + +++ GYV +T V+ DVD
Sbjct: 577 LRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVD 636
Query: 641 EEEKETVVSYHSEKLALAFGLINSRSKETIRITKNLRICGDCHLAFKLLSEIYRREIMVR 700
EE K ++ HSE+LA+AFG+IN+ TIR+TKN+RIC DCH+A K +S+I REI+VR
Sbjct: 637 EEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVR 696
Query: 701 DAIRFHLFKKGNCSCMDFW 719
D RFH F +GNCSC D+W
Sbjct: 697 DNSRFHHFNRGNCSCGDYW 715
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 449 bits (1156), Expect = e-125, Method: Compositional matrix adjust.
Identities = 248/608 (40%), Positives = 370/608 (60%), Gaps = 49/608 (8%)
Query: 122 LSSFKSGCQIHCHIIKFGLEF-DLFIRNALIHFYSIF----GYINNAHKVFEG-SLARDL 175
+SS QIH I+ G+ D + LI FY + ++ AHKVF ++
Sbjct: 27 VSSITKLRQIHAFSIRHGVSISDAELGKHLI-FYLVSLPSPPPMSYAHKVFSKIEKPINV 85
Query: 176 VSYNTLINGYAQVKEPCPALWLFRKMQDS-CIQPDAFTFVAMFSACTELNDPRIGKQFHA 234
+NTLI GYA++ A L+R+M+ S ++PD T+ + A T + D R+G+ H+
Sbjct: 86 FIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHS 145
Query: 235 VVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGK 294
VV ++ GS + ++ +++++YA CG
Sbjct: 146 VVIRS--GFGSLIYVQNSLLHLYANCG--------------------------------D 171
Query: 295 IERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRA 354
+ A ++FD+M ++DLV+W ++I+G+++ G +AL L+ +M S GI PD T+V++L A
Sbjct: 172 VASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSA 231
Query: 355 CVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYK-IPKNLKT 413
C +GAL GKR+H Y+ V RN+ + ++D+YA+CG ++ A ++F + + KN +
Sbjct: 232 CAKIGALTLGKRVHV-YMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKN--S 288
Query: 414 VSLFNSIISGLAQHGLGETSIAVFREME-LMGLKPDGVTFVTVLCACSHGGLVEEGKQFF 472
VS + S+I GLA +G G+ +I +F+ ME GL P +TFV +L ACSH G+V+EG ++F
Sbjct: 289 VS-WTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYF 347
Query: 473 ESMLN-YGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRN 531
M Y I+P++EH+GCMVDLLAR G++ +AY I+SMP N VIWR LL AC +H +
Sbjct: 348 RRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGD 407
Query: 532 AKIGEIAGQKLLDLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIE 591
+ + E A ++L LEP+H YVLLSNM A RW + +++RK M G++K PG S +E
Sbjct: 408 SDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVE 467
Query: 592 HNGTLHRFLASKKSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVVFDVDEEEKETVVSYH 651
+H FL KSHPQ+ I LK+MT +L+S GYVP V DV+EEEKE V YH
Sbjct: 468 VGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYH 527
Query: 652 SEKLALAFGLINSRSKETIRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKKG 711
SEK+A+AF LI++ + I + KNLR+C DCHLA KL+S++Y REI+VRD RFH FK G
Sbjct: 528 SEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNG 587
Query: 712 NCSCMDFW 719
+CSC D+W
Sbjct: 588 SCSCQDYW 595
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/461 (28%), Positives = 239/461 (51%), Gaps = 70/461 (15%)
Query: 11 LLALLESCKSLKQAL---------QIHGQIVHSGLNHHISSSQL---ISFFALS-GCKNG 57
LL ++E C +L Q QIH + G++ IS ++L + F+ +S
Sbjct: 11 LLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVS--ISDAELGKHLIFYLVSLPSPPP 68
Query: 58 LFRSRILFSQIDNP-NIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVL 116
+ + +FS+I+ P N+FIWNTL+RGY+ + A LY M G+V P+ T+PF++
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 117 NSCARLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLV 176
+ ++ + G IH +I+ G ++++N+L+H Y+ G + +A+KVF+ +DLV
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 177 SYNTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVV 236
++N++ING+A+ +P AL L+ +M I+PD FT V++ SAC ++ +GK+ H +
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 237 YKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIE 296
K +G + N+ ++++YA+CG + A+ +F M + K++ +W+S+I G
Sbjct: 249 IK-VG-LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLA------ 299
Query: 297 RARQLFDQMDQRDLVSWTAMISGYSQVGGF-SQALELFGKMESL-GIHPDEVTMVAVLRA 354
V GF +A+ELF MES G+ P E+T V +L A
Sbjct: 300 --------------------------VNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
Query: 355 CVGLG----ALDFGKRLHQQY-IENVV--FGRNIFLTTAVIDMYAKCGSIDTALSVFYKI 407
C G ++ +R+ ++Y IE + FG ++D+ A+ G + A +
Sbjct: 334 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFG-------CMVDLLARAGQVKKAYEYIKSM 386
Query: 408 PKNLKTVSLFNSIISGLAQHGLGETSIAVFREMELMGLKPD 448
P V ++ +++ H G++ +A F ++++ L+P+
Sbjct: 387 PMQ-PNVVIWRTLLGACTVH--GDSDLAEFARIQILQLEPN 424
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 449 bits (1154), Expect = e-125, Method: Compositional matrix adjust.
Identities = 249/663 (37%), Positives = 386/663 (58%), Gaps = 24/663 (3%)
Query: 58 LFRSRILFSQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLN 117
L ++R LF + ++ WNT++ GY+++ +A ++ M K VS N +V N
Sbjct: 142 LGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQN 201
Query: 118 SCARLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVS 177
S + C + K + L N L+ + I A + F+ RD+VS
Sbjct: 202 S---------KMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVS 252
Query: 178 YNTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVY 237
+NT+I GYAQ + A LF +S +Q D FT+ AM S + R+ ++ +
Sbjct: 253 WNTIITGYAQSGKIDEARQLF---DESPVQ-DVFTWTAMVSGYIQ---NRMVEEARELFD 305
Query: 238 KNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIER 297
K N + A++ Y + M MA+ +F M ++ + W++MI+GY + GKI
Sbjct: 306 K---MPERNEVSWNAMLAGYVQGERMEMAKELFDVMP-CRNVSTWNTMITGYAQCGKISE 361
Query: 298 ARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVG 357
A+ LFD+M +RD VSW AMI+GYSQ G +AL LF +ME G + + + L C
Sbjct: 362 AKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCAD 421
Query: 358 LGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLF 417
+ AL+ GK+LH + ++ + F+ A++ MY KCGSI+ A +F ++ K + +
Sbjct: 422 VVALELGKQLHGRLVKGG-YETGCFVGNALLLMYCKCGSIEEANDLFKEMAG--KDIVSW 478
Query: 418 NSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESML- 476
N++I+G ++HG GE ++ F M+ GLKPD T V VL ACSH GLV++G+Q+F +M
Sbjct: 479 NTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQ 538
Query: 477 NYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGE 536
+YG+ P +HY CMVDLL R G L++A+ L+++MP++ ++ IW LL A R+H N ++ E
Sbjct: 539 DYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAE 598
Query: 537 IAGQKLLDLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTL 596
A K+ +EP++ YVLLSN+ A + RW + ++R M D G++K PG+S+IE
Sbjct: 599 TAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKT 658
Query: 597 HRFLASKKSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVVFDVDEEEKETVVSYHSEKLA 656
H F + HP+ EI L+++ +++K AGYV T V+ DV+EEEKE +V YHSE+LA
Sbjct: 659 HTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLA 718
Query: 657 LAFGLINSRSKETIRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKKGNCSCM 716
+A+G++ S IR+ KNLR+C DCH A K ++ I R I++RD RFH FK G+CSC
Sbjct: 719 VAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCG 778
Query: 717 DFW 719
D+W
Sbjct: 779 DYW 781
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 134/501 (26%), Positives = 228/501 (45%), Gaps = 56/501 (11%)
Query: 70 NPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGC 129
+ +I WN + Y R+ EAL ++ M VS N ++ N L+
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELAR----- 115
Query: 130 QIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVK 189
+ E DL N +I Y + A ++FE RD+ S+NT+++GYAQ
Sbjct: 116 ----KLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNG 171
Query: 190 EPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYK---NLGCVGSN 246
A +F +M + + ++ A+ SA + + + +++K N V N
Sbjct: 172 CVDDARSVFDRMP----EKNDVSWNALLSAYVQNSK----MEEACMLFKSRENWALVSWN 223
Query: 247 MLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMD 306
LL + K + A + F +M + + +W+++I+GY + GKI+ ARQLFD+
Sbjct: 224 CLLGG-----FVKKKKIVEARQFFDSMNV-RDVVSWNTIITGYAQSGKIDEARQLFDESP 277
Query: 307 QRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKR 366
+D+ +WTAM+SGY Q +A ELF KM +EV+ A+L V ++ K
Sbjct: 278 VQDVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKE 333
Query: 367 LHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQ 426
L +V+ RN+ +I YA+CG I A ++F K+PK + + ++I+G +Q
Sbjct: 334 LF-----DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPK--RDPVSWAAMIAGYSQ 386
Query: 427 HGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLNYGIKPQMEH 486
G ++ +F +ME G + + +F + L C+ +E GKQ ++ G +
Sbjct: 387 SGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET---- 442
Query: 487 YGCMVD-----LLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIA--- 538
GC V + + G ++EA L + M + V W ++A H GE+A
Sbjct: 443 -GCFVGNALLLMYCKCGSIEEANDLFKEMA-GKDIVSWNTMIAGYSRH---GFGEVALRF 497
Query: 539 --GQKLLDLEPDHGAHYVLLS 557
K L+PD +LS
Sbjct: 498 FESMKREGLKPDDATMVAVLS 518
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 148/343 (43%), Gaps = 68/343 (19%)
Query: 240 LGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERAR 299
L C S++ I+ Y + G N A RVF M S+ +++ MISGY R G+ E AR
Sbjct: 57 LKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMP-RWSSVSYNGMISGYLRNGEFELAR 115
Query: 300 QLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLG 359
+LFD+M +RDLVSW MI GY + +A ELF I P+
Sbjct: 116 KLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF------EIMPE--------------- 154
Query: 360 ALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNS 419
R++ ++ YA+ G +D A SVF ++P+ K +N+
Sbjct: 155 -------------------RDVCSWNTMLSGYAQNGCVDDARSVFDRMPE--KNDVSWNA 193
Query: 420 IISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVE-----EGKQFFES 474
++S Q+ E + +F+ E + V C GG V+ E +QFF+S
Sbjct: 194 LLSAYVQNSKMEEACMLFKSRE---------NWALVSWNCLLGGFVKKKKIVEARQFFDS 244
Query: 475 MLNYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKI 534
M + + ++ A+ G++DEA L P + W A+++ +R +
Sbjct: 245 MNVRDVVS----WNTIITGYAQSGKIDEARQLFDESPVQ-DVFTWTAMVSGYIQNRMVE- 298
Query: 535 GEIAGQKLLDLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMD 577
++L D P+ + V + MLA + E ++L D
Sbjct: 299 ---EARELFDKMPER--NEVSWNAMLAGYVQGERMEMAKELFD 336
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 448 bits (1153), Expect = e-125, Method: Compositional matrix adjust.
Identities = 248/716 (34%), Positives = 400/716 (55%), Gaps = 57/716 (7%)
Query: 14 LLESC---KSLKQALQIHGQIVHSGLNHHISSSQLISFFALSGCKN------GLFRSRIL 64
LL+ C L+ +IHG +V SG + + FA++G +N + +R +
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFS--------LDLFAMTGLENMYAKCRQVNEARKV 192
Query: 65 FSQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSS 124
F ++ ++ WNT++ GYS++ + AL + SM + + P+ T VL + + L
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENL-KPSFITIVSVLPAVSALRL 251
Query: 125 FKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLING 184
G +IH + ++ G + + I AL+ Y+ G + A ++F+G L R++VS+N++I+
Sbjct: 252 ISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDA 311
Query: 185 YAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVG 244
Y Q + P A+ +F+KM D ++P + + AC +L D G+ H
Sbjct: 312 YVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIH----------- 360
Query: 245 SNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQ 304
++ +G+ ++ + +S+IS Y + +++ A +F +
Sbjct: 361 -----------------------KLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK 397
Query: 305 MDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFG 364
+ R LVSW AMI G++Q G AL F +M S + PD T V+V+ A L
Sbjct: 398 LQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA 457
Query: 365 KRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGL 424
K +H + + + +N+F+TTA++DMYAKCG+I A +F + + + V+ +N++I G
Sbjct: 458 KWIHGVVMRSCL-DKNVFVTTALVDMYAKCGAIMIARLIFDMMSE--RHVTTWNAMIDGY 514
Query: 425 AQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEG-KQFFESMLNYGIKPQ 483
HG G+ ++ +F EM+ +KP+GVTF++V+ ACSH GLVE G K F+ NY I+
Sbjct: 515 GTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELS 574
Query: 484 MEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIAGQKLL 543
M+HYG MVDLL R GRL+EA+ I MP ++ A+L AC++H+N E A ++L
Sbjct: 575 MDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLF 634
Query: 544 DLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTLHRFLASK 603
+L PD G ++VLL+N+ WE+ QVR M G++K PG S +E +H F +
Sbjct: 635 ELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGS 694
Query: 604 KSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVVFDVDEEEKETVVSYHSEKLALAFGLIN 663
+HP +K+I L+ + +K AGYVP+T +V V+ + KE ++S HSEKLA++FGL+N
Sbjct: 695 TAHPDSKKIYAFLEKLICHIKEAGYVPDT-NLVLGVENDVKEQLLSTHSEKLAISFGLLN 753
Query: 664 SRSKETIRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKKGNCSCMDFW 719
+ + TI + KNLR+C DCH A K +S + REI+VRD RFH FK G CSC D+W
Sbjct: 754 TTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 135/262 (51%), Gaps = 4/262 (1%)
Query: 283 SSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIH 342
+ ++S + R G ++ A ++F+ +D + V + M+ G+++V +AL+ F +M +
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 343 PDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALS 402
P +L+ C L GK +H +++ F ++F T + +MYAKC ++ A
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKS-GFSLDLFAMTGLENMYAKCRQVNEARK 191
Query: 403 VFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHG 462
VF ++P+ + + +N+I++G +Q+G+ ++ + + M LKP +T V+VL A S
Sbjct: 192 VFDRMPE--RDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249
Query: 463 GLVEEGKQFFESMLNYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRAL 522
L+ GK+ + G + +VD+ A+ G L+ A L M + N V W ++
Sbjct: 250 RLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWNSM 308
Query: 523 LAACRLHRNAKIGEIAGQKLLD 544
+ A + N K + QK+LD
Sbjct: 309 IDAYVQNENPKEAMLIFQKMLD 330
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 447 bits (1150), Expect = e-124, Method: Compositional matrix adjust.
Identities = 259/713 (36%), Positives = 400/713 (56%), Gaps = 47/713 (6%)
Query: 11 LLALLESCKSLKQALQIHGQIVHSGLNHHIS-SSQLISFFALSGCKNGLFR-SRILFSQI 68
+LA SL Q+H + GL+ ++ S+ LI+ + CK F +R +F +
Sbjct: 321 MLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMY----CKLRKFGFARTVFDNM 376
Query: 69 DNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKS- 127
++ WN+++ G +++ EA+ L+ +L G+ P+ +T VL + + L S
Sbjct: 377 SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGL-KPDQYTMTSVLKAASSLPEGLSL 435
Query: 128 GCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQ 187
Q+H H IK D F+ ALI YS + A +FE DLV++N ++ GY Q
Sbjct: 436 SKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERH-NFDLVAWNAMMAGYTQ 494
Query: 188 VKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNM 247
+ L LF M + D FT +F C L GKQ HA K+ ++
Sbjct: 495 SHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKS--GYDLDL 552
Query: 248 LLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQ 307
+ + +++MY KCG M+ A+ F D +
Sbjct: 553 WVSSGILDMYVKCGDMSAAQFAF--------------------------------DSIPV 580
Query: 308 RDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRL 367
D V+WT MISG + G +A +F +M +G+ PDE T+ + +A L AL+ G+++
Sbjct: 581 PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQI 640
Query: 368 HQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQH 427
H ++ + + F+ T+++DMYAKCGSID A +F +I + ++ +N+++ GLAQH
Sbjct: 641 HANALK-LNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRI--EMMNITAWNAMLVGLAQH 697
Query: 428 GLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESML-NYGIKPQMEH 486
G G+ ++ +F++M+ +G+KPD VTF+ VL ACSH GLV E + SM +YGIKP++EH
Sbjct: 698 GEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEH 757
Query: 487 YGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIAGQKLLDLE 546
Y C+ D L R G + +A LI+SM +A++ ++R LLAACR+ + + G+ KLL+LE
Sbjct: 758 YSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELE 817
Query: 547 PDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTLHRFLASKKSH 606
P + YVLLSNM A +W+E + R +M ++K PG+S+IE +H F+ +S+
Sbjct: 818 PLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSN 877
Query: 607 PQTKEIELMLKDMTMKLKSAGYVPNTVQVVFDVDEEEKETVVSYHSEKLALAFGLINSRS 666
QT+ I +KDM +K GYVP T + DV+EEEKE + YHSEKLA+AFGL+++
Sbjct: 878 RQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPP 937
Query: 667 KETIRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKKGNCSCMDFW 719
IR+ KNLR+CGDCH A K ++++Y REI++RDA RFH FK G CSC D+W
Sbjct: 938 STPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 141/529 (26%), Positives = 239/529 (45%), Gaps = 54/529 (10%)
Query: 105 VSPNNFTFPFVLNSCARLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAH 164
V + TF +L + ++ S G Q+HC +K GL+ L + N+LI+ Y A
Sbjct: 311 VECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFAR 370
Query: 165 KVFEGSLARDLVSYNTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELN 224
VF+ RDL+S+N++I G AQ A+ LF ++ ++PD +T ++ A + L
Sbjct: 371 TVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLP 430
Query: 225 DP-RIGKQ--FHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAA 281
+ + KQ HA+ N+ S+ + TA+I+ Y++ M AE +F A
Sbjct: 431 EGLSLSKQVHVHAIKINNV----SDSFVSTALIDAYSRNRCMKEAEILFERHNF--DLVA 484
Query: 282 WSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGI 341
W++M++GYT Q + L+LF M G
Sbjct: 485 WNAMMAGYT-------------------------------QSHDGHKTLKLFALMHKQGE 513
Query: 342 HPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTAL 401
D+ T+ V + C L A++ GK++H I++ + ++++++ ++DMY KCG + A
Sbjct: 514 RSDDFTLATVFKTCGFLFAINQGKQVHAYAIKS-GYDLDLWVSSGILDMYVKCGDMSAAQ 572
Query: 402 SVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSH 461
F IP + + ++ISG ++G E + VF +M LMG+ PD T T+ A S
Sbjct: 573 FAFDSIP--VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSC 630
Query: 462 GGLVEEGKQFFESMLNYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRA 521
+E+G+Q + L +VD+ A+ G +D+AY L + + N W A
Sbjct: 631 LTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNA 689
Query: 522 LLAACRLHRNAK--IGEIAGQKLLDLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDS 579
+L H K + K L ++PD +LS E + +R + D
Sbjct: 690 MLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDY 749
Query: 580 GIQKPPGWSYIEHNGTLHRFLASKKSHPQTKEIELMLKDMTMKLKSAGY 628
GI KP IEH L L K+ E +++ M+M+ ++ Y
Sbjct: 750 GI-KPE----IEHYSCLADALGRA---GLVKQAENLIESMSMEASASMY 790
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 126/532 (23%), Positives = 239/532 (44%), Gaps = 64/532 (12%)
Query: 43 SQLISFFALSGCKNGLFRSRILFSQIDNPNIFIWNTLMRGYSRS-----DSPQEALVLYT 97
+ LIS ++ G L +R +F ++ + ++ WN+++ Y++S ++ Q+A +L+
Sbjct: 78 NNLISMYSKCG---SLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLF- 133
Query: 98 SMLSKGIVSPNNFTFPFVLNSCARLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIF 157
+L + +V + T +L C + H + K GL+ D F+ AL++ Y F
Sbjct: 134 RILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKF 193
Query: 158 GYINNAHKVFEGSLARDLVSYNTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMF 217
G + +FE RD+V +N ++ Y ++ A+ L S + P+ T +
Sbjct: 194 GKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLA 253
Query: 218 SACTELNDPRIGKQF---------HAVVYKNLGC-------------------VGSN--- 246
+ +D K F ++++N G V S+
Sbjct: 254 RISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVEC 313
Query: 247 ------MLLKTAVINMYAKCGLMNMAERVFS---TMGMSKSTAAWSSMISGYTREGKIER 297
++L TAV K + + ++V +G+ +S+I+ Y + K
Sbjct: 314 DQVTFILMLATAV-----KVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGF 368
Query: 298 ARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVG 357
AR +FD M +RDL+SW ++I+G +Q G +A+ LF ++ G+ PD+ TM +VL+A
Sbjct: 369 ARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS 428
Query: 358 LG-ALDFGKRLHQQYIE--NVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTV 414
L L K++H I+ NV + F++TA+ID Y++ + A +F + N V
Sbjct: 429 LPEGLSLSKQVHVHAIKINNV---SDSFVSTALIDAYSRNRCMKEAEILFER--HNFDLV 483
Query: 415 SLFNSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFES 474
+ +N++++G Q G ++ +F M G + D T TV C + +GKQ
Sbjct: 484 A-WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAY 542
Query: 475 MLNYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAAC 526
+ G + ++D+ + G + A S+P + V W +++ C
Sbjct: 543 AIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGC 593
Score = 106 bits (264), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 116/463 (25%), Positives = 191/463 (41%), Gaps = 63/463 (13%)
Query: 112 FPFVLNSCARLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSL 171
F F+ N+ S G H I+ F + F+ N LI YS G + A +VF+
Sbjct: 43 FGFLRNAITS-SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 172 ARDLVSYNTLINGYAQVKEPC-----PALWLFRKMQDSCIQPDAFTFVAMFSACTELNDP 226
RDLVS+N+++ YAQ E A LFR ++ + T M C
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 227 RIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMI 286
+ FH K +G G + A++N+Y K G + + +F M + W+ M+
Sbjct: 162 WASESFHGYACK-IGLDGDE-FVAGALVNIYLKFGKVKEGKVLFEEMPY-RDVVLWNLML 218
Query: 287 SGYTREGKIERARQLFDQMDQRDL------VSWTAMISG--------------------- 319
Y G E A L L + A ISG
Sbjct: 219 KAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVS 278
Query: 320 -----------YSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRLH 368
Y G +S L+ F M + D+VT + +L V + +L G+++H
Sbjct: 279 EIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVH 338
Query: 369 QQYIENVVFGRNIFLTT--AVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQ 426
++ G ++ LT ++I+MY K A +VF + + + + +NS+I+G+AQ
Sbjct: 339 CMALK---LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSE--RDLISWNSVIAGIAQ 393
Query: 427 HGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLNYGIKPQMEH 486
+GL ++ +F ++ GLKPD T +VL A S + EG + + + IK
Sbjct: 394 NGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGLSLSKQVHVHAIKINNVS 450
Query: 487 YG----CMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAA 525
++D +R+ + EA L + +D V W A++A
Sbjct: 451 DSFVSTALIDAYSRNRCMKEAEILFERHNFDL--VAWNAMMAG 491
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 446 bits (1148), Expect = e-124, Method: Compositional matrix adjust.
Identities = 250/668 (37%), Positives = 388/668 (58%), Gaps = 51/668 (7%)
Query: 64 LFSQ-IDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARL 122
LF++ +D ++F WN+++ +RS EAL+ ++SM K + P +FP + +C+ L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSM-RKLSLYPTRSSFPCAIKACSSL 89
Query: 123 SSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLI 182
SG Q H FG + D+F+ +ALI YS G + +A KVF+ R++VS+ ++I
Sbjct: 90 FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149
Query: 183 NGYAQVKEPCPALWLFRKM------QDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVV 236
GY A+ LF+ + D + D+ V++ SAC+ + + + H+ V
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209
Query: 237 YK---NLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREG 293
K + G N LL + YAK G EG
Sbjct: 210 IKRGFDRGVSVGNTLL-----DAYAKGG------------------------------EG 234
Query: 294 KIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKM-ESLGIHPDEVTMVAVL 352
+ AR++FDQ+ +D VS+ +++S Y+Q G ++A E+F ++ ++ + + +T+ VL
Sbjct: 235 GVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVL 294
Query: 353 RACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLK 412
A GAL GK +H Q I + ++ + T++IDMY KCG ++TA F ++ KN K
Sbjct: 295 LAVSHSGALRIGKCIHDQVIR-MGLEDDVIVGTSIIDMYCKCGRVETARKAFDRM-KN-K 351
Query: 413 TVSLFNSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFF 472
V + ++I+G HG ++ +F M G++P+ +TFV+VL ACSH GL EG ++F
Sbjct: 352 NVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWF 411
Query: 473 ESMLN-YGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRN 531
+M +G++P +EHYGCMVDLL R G L +AY LIQ M +S+IW +LLAACR+H+N
Sbjct: 412 NAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKN 471
Query: 532 AKIGEIAGQKLLDLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIE 591
++ EI+ +L +L+ + +Y+LLS++ A+ RW++ +VR +M + G+ KPPG+S +E
Sbjct: 472 VELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLE 531
Query: 592 HNGTLHRFLASKKSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVVFDVDEEEKETVVSYH 651
NG +H FL + HPQ ++I L ++ KL AGYV NT V DVDEEEKE + H
Sbjct: 532 LNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVH 591
Query: 652 SEKLALAFGLINSRSKETIRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKKG 711
SEKLA+AFG++N+ T+ + KNLR+C DCH KL+S+I RE +VRDA RFH FK G
Sbjct: 592 SEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDG 651
Query: 712 NCSCMDFW 719
CSC D+W
Sbjct: 652 GCSCGDYW 659
Score = 115 bits (289), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 177/381 (46%), Gaps = 67/381 (17%)
Query: 1 MKRLVL--EHSSLLALLESCKSLKQAL---QIHGQIVHSGLNHHI-SSSQLISFFALSGC 54
M++L L SS +++C SL Q H Q G I SS LI ++ G
Sbjct: 67 MRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCG- 125
Query: 55 KNGLFRSRILFSQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSML-------------S 101
L +R +F +I NI W +++RGY + + +A+ L+ +L S
Sbjct: 126 --KLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDS 183
Query: 102 KGIVSPNNFTFPFVLNSCARLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGY-- 159
G+VS V+++C+R+ + IH +IK G + + + N L+ Y+ G
Sbjct: 184 MGLVS--------VISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGG 235
Query: 160 INNAHKVFEGSLARDLVSYNTLINGYAQVKEPCPALWLFRKM-QDSCIQPDAFTFVAMFS 218
+ A K+F+ + +D VSYN++++ YAQ A +FR++ ++ + +A T +
Sbjct: 236 VAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLL 295
Query: 219 ACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKS 278
A + RIGK H V + +G + ++++ T++I+MY KCG + A + F M +K+
Sbjct: 296 AVSHSGALRIGKCIHDQVIR-MG-LEDDVIVGTSIIDMYCKCGRVETARKAFDRM-KNKN 352
Query: 279 TAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMES 338
+W++MI+GY G ++ALELF M
Sbjct: 353 VRSWTAMIAGYGMHGHA-------------------------------AKALELFPAMID 381
Query: 339 LGIHPDEVTMVAVLRACVGLG 359
G+ P+ +T V+VL AC G
Sbjct: 382 SGVRPNYITFVSVLAACSHAG 402
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 140/300 (46%), Gaps = 8/300 (2%)
Query: 4 LVLEHSSLLALLESC-----KSLKQALQIHGQIVHSGLNHHISSSQLISFFALSGCKNGL 58
+ L+ L++++ +C K L ++ IH ++ G + +S + G + G+
Sbjct: 179 MFLDSMGLVSVISACSRVPAKGLTES--IHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGV 236
Query: 59 FRSRILFSQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNS 118
+R +F QI + + +N++M Y++S EA ++ ++ +V+ N T VL +
Sbjct: 237 AVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLA 296
Query: 119 CARLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSY 178
+ + + G IH +I+ GLE D+ + ++I Y G + A K F+ +++ S+
Sbjct: 297 VSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSW 356
Query: 179 NTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYK 238
+I GY AL LF M DS ++P+ TFV++ +AC+ G ++ +
Sbjct: 357 TAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKG 416
Query: 239 NLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERA 298
G V + ++++ + G + A + M M + WSS+++ +E A
Sbjct: 417 RFG-VEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELA 475
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 444 bits (1142), Expect = e-123, Method: Compositional matrix adjust.
Identities = 259/743 (34%), Positives = 413/743 (55%), Gaps = 53/743 (7%)
Query: 18 CKS--LKQALQIHGQIVHSGLNHHISSSQLISFFALSGCKNGLFRSRILFSQIDNPNIFI 75
CKS L A Q+ +I I+ + ++S + SG L R + + + +
Sbjct: 60 CKSSELNYARQLFDEISEP---DKIARTTMVSGYCASG-DITLARGVFEKAPVCMRDTVM 115
Query: 76 WNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGC-QIHCH 134
+N ++ G+S ++ A+ L+ M +G P+NFTF VL A ++ + C Q H
Sbjct: 116 YNAMITGFSHNNDGYSAINLFCKMKHEGF-KPDNFTFASVLAGLALVADDEKQCVQFHAA 174
Query: 135 IIKFGLEFDLFIRNALIHFYSIFG----YINNAHKVFEGSLARD---------------- 174
+K G + + NAL+ YS +++A KVF+ L +D
Sbjct: 175 ALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGY 234
Query: 175 ----------------LVSYNTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFS 218
LV+YN +I+GY AL + R+M S I+ D FT+ ++
Sbjct: 235 FDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIR 294
Query: 219 ACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKS 278
AC ++GKQ HA V + + +++++Y KCG + A +F M +K
Sbjct: 295 ACATAGLLQLGKQVHAYVLRR---EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMP-AKD 350
Query: 279 TAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMES 338
+W++++SGY G I A+ +F +M +++++SW MISG ++ G + L+LF M+
Sbjct: 351 LVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKR 410
Query: 339 LGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSID 398
G P + +++C LGA G++ H Q ++ + F ++ A+I MYAKCG ++
Sbjct: 411 EGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLK-IGFDSSLSAGNALITMYAKCGVVE 469
Query: 399 TALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCA 458
A VF +P L +VS +N++I+ L QHG G ++ V+ EM G++PD +T +TVL A
Sbjct: 470 EARQVFRTMP-CLDSVS-WNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTA 527
Query: 459 CSHGGLVEEGKQFFESMLN-YGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSV 517
CSH GLV++G+++F+SM Y I P +HY ++DLL R G+ +A +I+S+P+ +
Sbjct: 528 CSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAE 587
Query: 518 IWRALLAACRLHRNAKIGEIAGQKLLDLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMD 577
IW ALL+ CR+H N ++G IA KL L P+H Y+LLSNM A T +WEE +VRKLM
Sbjct: 588 IWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMR 647
Query: 578 DSGIQKPPGWSYIEHNGTLHRFLASKKSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVVF 637
D G++K S+IE +H FL SHP+ + + + L+D+ +++ GYVP+T V+
Sbjct: 648 DRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLH 707
Query: 638 DVDEE-EKETVVSYHSEKLALAFGLINSRSKETIRITKNLRICGDCHLAFKLLSEIYRRE 696
DV+ + KE +++ HSEK+A+AFGL+ TIRI KNLR CGDCH F+ LS + +R+
Sbjct: 708 DVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRD 767
Query: 697 IMVRDAIRFHLFKKGNCSCMDFW 719
I++RD RFH F+ G CSC +FW
Sbjct: 768 IILRDRKRFHHFRNGECSCGNFW 790
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 142/308 (46%), Gaps = 18/308 (5%)
Query: 9 SSLLALLESCKSLKQALQIHGQIVHSGLNHHISSSQLISFFALSGCKNGLFRSRILFSQI 68
+SL++L C +A I ++ L +S + L+S + SG + ++++F ++
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPAKDL---VSWNALLSGYVSSG---HIGEAKLIFKEM 377
Query: 69 DNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSG 128
NI W ++ G + + +E L L++ M +G P ++ F + SCA L ++ +G
Sbjct: 378 KEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGF-EPCDYAFSGAIKSCAVLGAYCNG 436
Query: 129 CQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQV 188
Q H ++K G + L NALI Y+ G + A +VF D VS+N LI Q
Sbjct: 437 QQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQH 496
Query: 189 KEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFH---AVVYKNLGCVGS 245
A+ ++ +M I+PD T + + +AC+ G+++ VY+ +
Sbjct: 497 GHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYR----IPP 552
Query: 246 NMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIE----RARQL 301
+I++ + G + AE V ++ + W +++SG G +E A +L
Sbjct: 553 GADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKL 612
Query: 302 FDQMDQRD 309
F + + D
Sbjct: 613 FGLIPEHD 620
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 176/417 (42%), Gaps = 88/417 (21%)
Query: 272 TMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQVG------- 324
T G + +I Y + ++ ARQLFD++ + D ++ T M+SGY G
Sbjct: 42 TFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARG 101
Query: 325 --------------------GFSQ------ALELFGKMESLGIHPDEVTMVAVLRACVGL 358
GFS A+ LF KM+ G PD T +VL A + L
Sbjct: 102 VFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL-AGLAL 160
Query: 359 GALDFGK--RLHQQYIENVVFGRNIFLTTAVIDMYAKCGS----IDTALSVFYKI----- 407
A D + + H +++ G ++ A++ +Y+KC S + +A VF +I
Sbjct: 161 VADDEKQCVQFHAAALKSGA-GYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDE 219
Query: 408 --------------------------PKNLKTVSLFNSIISGLAQHGLGETSIAVFREME 441
N+K V+ +N++ISG G + ++ + R M
Sbjct: 220 RSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVA-YNAMISGYVNRGFYQEALEMVRRMV 278
Query: 442 LMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLNYGIKPQMEHY-GCMVDLLARDGRL 500
G++ D T+ +V+ AC+ GL++ GKQ +L + H+ +V L + G+
Sbjct: 279 SSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR--EDFSFHFDNSLVSLYYKCGKF 336
Query: 501 DEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIAGQKLL--DLEPDHGAHYVLLSN 558
DEA + + MP + V W ALL+ G I KL+ +++ + ++++ +
Sbjct: 337 DEARAIFEKMPAK-DLVSWNALLSG-----YVSSGHIGEAKLIFKEMKEKNILSWMIMIS 390
Query: 559 MLAETYRWEEARQVRKLMDDSGIQKPPGWSY---IEHNGTLHRFLASKKSHPQTKEI 612
LAE EE ++ M G + P +++ I+ L + ++ H Q +I
Sbjct: 391 GLAENGFGEEGLKLFSCMKREGFE-PCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKI 446
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 69/161 (42%), Gaps = 17/161 (10%)
Query: 329 ALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVI 388
A + G + + G P + ++ L++ ++L + E R T ++
Sbjct: 33 ARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIAR-----TTMV 87
Query: 389 DMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFREMELMGLKPD 448
Y G I A VF K P ++ ++N++I+G + + G ++I +F +M+ G KPD
Sbjct: 88 SGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPD 147
Query: 449 GVTFVTVL------------CACSHGGLVEEGKQFFESMLN 477
TF +VL C H ++ G + S+ N
Sbjct: 148 NFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSN 188
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 439 bits (1128), Expect = e-122, Method: Compositional matrix adjust.
Identities = 259/707 (36%), Positives = 395/707 (55%), Gaps = 48/707 (6%)
Query: 21 LKQALQIHGQIVHSGLNHHISS--SQLISFFALSGCKNGLFRSRILFSQIDNPNIFIWNT 78
LK+ ++HG ++ +GL + + L++ +A G + +R +F + + + WN+
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCG---SIADARRVFYFMTDKDSVSWNS 385
Query: 79 LMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGCQIHCHIIKF 138
++ G ++ EA+ Y SM I+ P +FT L+SCA L K G QIH +K
Sbjct: 386 MITGLDQNGCFIEAVERYKSMRRHDIL-PGSFTLISSLSSCASLKWAKLGQQIHGESLKL 444
Query: 139 GLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVKEPCP-ALWL 197
G++ ++ + NAL+ Y+ GY+N K+F D VS+N++I A+ + P A+
Sbjct: 445 GIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVC 504
Query: 198 FRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMY 257
F Q + + + TF ++ SA + L+ +GKQ H + KN + + A+I Y
Sbjct: 505 FLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKN--NIADEATTENALIACY 562
Query: 258 AKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMI 317
KCG M+ E++FS M ++RD V+W +MI
Sbjct: 563 GKCGEMDGCEKIFSRMA-------------------------------ERRDNVTWNSMI 591
Query: 318 SGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVF 377
SGY ++AL+L M G D VL A + L+ G +H +
Sbjct: 592 SGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVR-ACL 650
Query: 378 GRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVF 437
++ + +A++DMY+KCG +D AL F +P ++ +NS+ISG A+HG GE ++ +F
Sbjct: 651 ESDVVVGSALVDMYSKCGRLDYALRFFNTMP--VRNSYSWNSMISGYARHGQGEEALKLF 708
Query: 438 REMELMG-LKPDGVTFVTVLCACSHGGLVEEGKQFFESMLN-YGIKPQMEHYGCMVDLLA 495
M+L G PD VTFV VL ACSH GL+EEG + FESM + YG+ P++EH+ CM D+L
Sbjct: 709 ETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLG 768
Query: 496 RDGRLDEAYGLIQSMPYDANSVIWRALLAAC-RLH-RNAKIGEIAGQKLLDLEPDHGAHY 553
R G LD+ I+ MP N +IWR +L AC R + R A++G+ A + L LEP++ +Y
Sbjct: 769 RAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNY 828
Query: 554 VLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTLHRFLASKKSHPQTKEIE 613
VLL NM A RWE+ + RK M D+ ++K G+S++ +H F+A KSHP I
Sbjct: 829 VLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIY 888
Query: 614 LMLKDMTMKLKSAGYVPNTVQVVFDVDEEEKETVVSYHSEKLALAFGLINSRSKE-TIRI 672
LK++ K++ AGYVP T ++D+++E KE ++SYHSEKLA+AF L RS IRI
Sbjct: 889 KKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRI 948
Query: 673 TKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKKGNCSCMDFW 719
KNLR+CGDCH AFK +S+I R+I++RD+ RFH F+ G CSC DFW
Sbjct: 949 MKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 215/470 (45%), Gaps = 39/470 (8%)
Query: 61 SRILFSQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCA 120
+R +F ++ N W ++ GYSR+ +EALV M+ +GI S N + F VL +C
Sbjct: 55 ARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFS-NQYAFVSVLRACQ 113
Query: 121 RLSSFKS--GCQIHCHIIKFGLEFDLFIRNALIHFY-SIFGYINNAHKVFEGSLARDLVS 177
+ S G QIH + K D + N LI Y G + A F ++ VS
Sbjct: 114 EIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVS 173
Query: 178 YNTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDP--RIGKQFHAV 235
+N++I+ Y+Q + A +F MQ +P +TF ++ + L +P R+ +Q
Sbjct: 174 WNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCT 233
Query: 236 VYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKI 295
+ K+ G + +++ + + +++ +AK G ++ A +VF+ M +++ + ++ G R+
Sbjct: 234 IQKS-GLL-TDLFVGSGLVSAFAKSGSLSYARKVFNQM-ETRNAVTLNGLMVGLVRQKWG 290
Query: 296 ERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRAC 355
E A +LF M+ VS + + S +S A E+
Sbjct: 291 EEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEV----------------------- 327
Query: 356 VGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVS 415
L G+ +H I + + + +++MYAKCGSI A VFY + K
Sbjct: 328 ----GLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTD--KDSV 381
Query: 416 LFNSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESM 475
+NS+I+GL Q+G ++ ++ M + P T ++ L +C+ + G+Q
Sbjct: 382 SWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGES 441
Query: 476 LNYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAA 525
L GI + ++ L A G L+E + SMP + + V W +++ A
Sbjct: 442 LKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 131/532 (24%), Positives = 240/532 (45%), Gaps = 58/532 (10%)
Query: 10 SLLALLESCKSLKQALQIHGQIVHSGLNHHIS-------SSQLISFFALSGCKNGLFRSR 62
+ +++L +C+ + + G+ +H GL +S S+ LIS + C + +
Sbjct: 104 AFVSVLRACQEIGSVGILFGRQIH-GLMFKLSYAVDAVVSNVLISMYW--KCIGSVGYAL 160
Query: 63 ILFSQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARL 122
F I+ N WN+++ YS++ + A +++SM G P +TF ++ + L
Sbjct: 161 CAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDG-SRPTEYTFGSLVTTACSL 219
Query: 123 S--SFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNT 180
+ + QI C I K GL DLF+ + L+ ++ G ++ A KVF R+ V+ N
Sbjct: 220 TEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNG 279
Query: 181 LINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELN-----DPRIGKQFHAV 235
L+ G + K A LF M +S I ++V + S+ E + + G++ H
Sbjct: 280 LMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGH 338
Query: 236 VYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKI 295
V G V + + ++NMYAKCG + A RVF M K + +W+SMI+G
Sbjct: 339 VITT-GLVDFMVGIGNGLVNMYAKCGSIADARRVFYFM-TDKDSVSWNSMITG------- 389
Query: 296 ERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRAC 355
+DQ G F +A+E + M I P T+++ L +C
Sbjct: 390 ---------LDQN---------------GCFIEAVERYKSMRRHDILPGSFTLISSLSSC 425
Query: 356 VGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVS 415
L G+++H + ++ + N+ ++ A++ +YA+ G ++ +F +P++ +
Sbjct: 426 ASLKWAKLGQQIHGESLK-LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVS- 483
Query: 416 LFNSIISGLA--QHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFE 473
+NSII LA + L E ++ F + G K + +TF +VL A S E GKQ
Sbjct: 484 -WNSIIGALARSERSLPE-AVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHG 541
Query: 474 SMLNYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAA 525
L I + ++ + G +D + M ++V W ++++
Sbjct: 542 LALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 154/317 (48%), Gaps = 30/317 (9%)
Query: 283 SSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIH 342
+++I+ Y G AR++FD+M R+ VSW ++SGYS+ G +AL M GI
Sbjct: 40 NNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIF 99
Query: 343 PDEVTMVAVLRACVGLGALD--FGKRLHQQYIENVVFGRNIFLTTAVIDMYAKC-GSIDT 399
++ V+VLRAC +G++ FG+++H + + + + ++ +I MY KC GS+
Sbjct: 100 SNQYAFVSVLRACQEIGSVGILFGRQIHGLMFK-LSYAVDAVVSNVLISMYWKCIGSVGY 158
Query: 400 ALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVT-VLCA 458
AL F I +K +NSIIS +Q G ++ +F M+ G +P TF + V A
Sbjct: 159 ALCAFGDI--EVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTA 216
Query: 459 CSHGGLVEEGKQFFESML----NYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDA 514
CS L E + E ++ G+ + +V A+ G L A + M
Sbjct: 217 CS---LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQME-TR 272
Query: 515 NSVIWRALLAACRLHRNAKIGEIAGQ------KLLDLEPDHGAHYVLLSNM----LAETY 564
N+V L+ L R K GE A + ++D+ P+ ++ +LLS+ LAE
Sbjct: 273 NAVTLNGLMVG--LVRQ-KWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEV 327
Query: 565 RWEEARQVRKLMDDSGI 581
++ R+V + +G+
Sbjct: 328 GLKKGREVHGHVITTGL 344
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 438 bits (1126), Expect = e-122, Method: Compositional matrix adjust.
Identities = 245/738 (33%), Positives = 416/738 (56%), Gaps = 51/738 (6%)
Query: 23 QALQIHGQIVHSGL-NHHISSSQLISFFALSGCKNGLFRSRILFSQIDNPNIFIWNTLMR 81
+ Q H +I+ SG N S++LI+ ++ C N + ++ I +P I+ +++L+
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFND---ADLVLQSIPDPTIYSFSSLIY 89
Query: 82 GYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGCQIHCHIIKFGLE 141
+++ +++ +++ M S G++ P++ P + CA LS+FK G QIHC GL+
Sbjct: 90 ALTKAKLFTQSIGVFSRMFSHGLI-PDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLD 148
Query: 142 FDLFIRNALIHFYSIFGYINNAHKVFE--------------------------------- 168
D F++ ++ H Y G + +A KVF+
Sbjct: 149 MDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEM 208
Query: 169 --GSLARDLVSYNTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDP 226
+ ++VS+N +++G+ + A+ +F+K+ PD T ++ + +
Sbjct: 209 ESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEML 268
Query: 227 RIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMI 286
+G+ H V K G + ++ +A+I+MY K G + +F+ M ++ ++ I
Sbjct: 269 NMGRLIHGYVIKQ-GLLKDKCVI-SAMIDMYGKSGHVYGIISLFNQFEMMEAGVC-NAYI 325
Query: 287 SGYTREGKIERARQLFD----QMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIH 342
+G +R G +++A ++F+ Q + ++VSWT++I+G +Q G +ALELF +M+ G+
Sbjct: 326 TGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVK 385
Query: 343 PDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALS 402
P+ VT+ ++L AC + AL G+ H + V N+ + +A+IDMYAKCG I+ +
Sbjct: 386 PNHVTIPSMLPACGNIAALGHGRSTHG-FAVRVHLLDNVHVGSALIDMYAKCGRINLSQI 444
Query: 403 VFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHG 462
VF +P K + +NS+++G + HG + +++F + LKPD ++F ++L AC
Sbjct: 445 VFNMMPT--KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQV 502
Query: 463 GLVEEGKQFFESMLN-YGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRA 521
GL +EG ++F+ M YGIKP++EHY CMV+LL R G+L EAY LI+ MP++ +S +W A
Sbjct: 503 GLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGA 562
Query: 522 LLAACRLHRNAKIGEIAGQKLLDLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGI 581
LL +CRL N + EIA +KL LEP++ YVLLSN+ A W E +R M+ G+
Sbjct: 563 LLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGL 622
Query: 582 QKPPGWSYIEHNGTLHRFLASKKSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVVFDVDE 641
+K PG S+I+ ++ LA KSHPQ +I + +++ +++ +G+ PN + DV+E
Sbjct: 623 KKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEE 682
Query: 642 EEKETVVSYHSEKLALAFGLINSRSKETIRITKNLRICGDCHLAFKLLSEIYRREIMVRD 701
+E+E ++ HSEKLA+ FGL+N+ +++ KNLRICGDCH K +S REI +RD
Sbjct: 683 QEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRD 742
Query: 702 AIRFHLFKKGNCSCMDFW 719
RFH FK G CSC DFW
Sbjct: 743 TNRFHHFKDGICSCGDFW 760
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 438 bits (1126), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/659 (36%), Positives = 360/659 (54%), Gaps = 40/659 (6%)
Query: 63 ILFSQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARL 122
+LF +I + +NTL+ GY + E++ L+ M G P++FTF VL + L
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGH-QPSDFTFSGVLKAVVGL 263
Query: 123 SSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLI 182
F G Q+H + G D + N ++ FYS + +F+ D VSYN +I
Sbjct: 264 HDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVI 323
Query: 183 NGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGC 242
+ Y+Q + +L FR+MQ F F M S L+ ++G+Q H L
Sbjct: 324 SSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL--LAT 381
Query: 243 VGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLF 302
S + + ++++MYAKC + AE +F +
Sbjct: 382 ADSILHVGNSLVDMYAKCEMFEEAELIFKS------------------------------ 411
Query: 303 DQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALD 362
+ QR VSWTA+ISGY Q G L+LF KM + D+ T VL+A +L
Sbjct: 412 --LPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLL 469
Query: 363 FGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIIS 422
GK+LH I + N+F + ++DMYAKCGSI A+ VF ++P + +N++IS
Sbjct: 470 LGKQLHAFIIRSGNL-ENVFSGSGLVDMYAKCGSIKDAVQVFEEMPD--RNAVSWNALIS 526
Query: 423 GLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLN-YGIK 481
A +G GE +I F +M GL+PD V+ + VL ACSH G VE+G ++F++M YGI
Sbjct: 527 AHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGIT 586
Query: 482 PQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIAGQK 541
P+ +HY CM+DLL R+GR EA L+ MP++ + ++W ++L ACR+H+N + E A +K
Sbjct: 587 PKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEK 646
Query: 542 LLDLEP-DHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTLHRFL 600
L +E A YV +SN+ A WE+ R V+K M + GI+K P +S++E N +H F
Sbjct: 647 LFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFS 706
Query: 601 ASKKSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVVFDVDEEEKETVVSYHSEKLALAFG 660
++ ++HP EI + ++T +++ GY P+T VV DVDE+ K + YHSE+LA+AF
Sbjct: 707 SNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFA 766
Query: 661 LINSRSKETIRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKKGNCSCMDFW 719
LI++ I + KNLR C DCH A KL+S+I +REI VRD RFH F +G CSC D+W
Sbjct: 767 LISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 154/324 (47%), Gaps = 13/324 (4%)
Query: 26 QIHGQIVHSGLNHHIS-SSQLISFFALSGCKNGLFRSRILFSQIDNPNIFIWNTLMRGYS 84
Q+H V +G + S +Q++ F++ + + +R+LF ++ + +N ++ YS
Sbjct: 271 QLHALSVTTGFSRDASVGNQILDFYSK---HDRVLETRMLFDEMPELDFVSYNVVISSYS 327
Query: 85 RSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGCQIHCHIIKFGLEFDL 144
++D + +L + M G NF F +L+ A LSS + G Q+HC + + L
Sbjct: 328 QADQYEASLHFFREMQCMGF-DRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSIL 386
Query: 145 FIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVKEPCPALWLFRKMQDS 204
+ N+L+ Y+ A +F+ R VS+ LI+GY Q L LF KM+ S
Sbjct: 387 HVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGS 446
Query: 205 CIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMN 264
++ D TF + A +GKQ HA + ++ N+ + +++MYAKCG +
Sbjct: 447 NLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNL--ENVFSGSGLVDMYAKCGSIK 504
Query: 265 MAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMD----QRDLVSWTAMISGY 320
A +VF M ++ +W+++IS + G E A F +M Q D VS +++
Sbjct: 505 DAVQVFEEMP-DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTAC 563
Query: 321 SQVGGFSQALELFGKMESL-GIHP 343
S G Q E F M + GI P
Sbjct: 564 SHCGFVEQGTEYFQAMSPIYGITP 587
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 171/385 (44%), Gaps = 50/385 (12%)
Query: 148 NALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVKEPCPALWLFRKM--QDSC 205
N +I + G +++A +F+ R +V++ L+ YA+ A LFR+M SC
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 206 IQPDAFTFVAMFSACTELNDPRIGKQFHAVVYK-----NLGCVGSNMLLKTAVINMYAKC 260
PD TF + C + Q HA K N SN+LLK+
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKS--------- 193
Query: 261 GLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGY 320
Y +++ A LF+++ ++D V++ +I+GY
Sbjct: 194 ----------------------------YCEVRRLDLACVLFEEIPEKDSVTFNTLITGY 225
Query: 321 SQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRN 380
+ G +++++ LF KM G P + T VL+A VGL G++LH + F R+
Sbjct: 226 EKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSV-TTGFSRD 284
Query: 381 IFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFREM 440
+ ++D Y+K + +F ++P+ L VS +N +IS +Q E S+ FREM
Sbjct: 285 ASVGNQILDFYSKHDRVLETRMLFDEMPE-LDFVS-YNVVISSYSQADQYEASLHFFREM 342
Query: 441 ELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLNYGIKPQMEHYG-CMVDLLARDGR 499
+ MG F T+L ++ ++ G+Q L + H G +VD+ A+
Sbjct: 343 QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL-LATADSILHVGNSLVDMYAKCEM 401
Query: 500 LDEAYGLIQSMPYDANSVIWRALLA 524
+EA + +S+P +V W AL++
Sbjct: 402 FEEAELIFKSLP-QRTTVSWTALIS 425
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 121/255 (47%), Gaps = 8/255 (3%)
Query: 261 GLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGY 320
G ++ A +V+ M K+T + ++MISG+ + G + AR LFD M R +V+WT ++ Y
Sbjct: 62 GQVSAARKVYDEMP-HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWY 120
Query: 321 SQVGGFSQALELFGKM--ESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFG 378
++ F +A +LF +M S PD VT +L C + ++H + + F
Sbjct: 121 ARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVH-AFAVKLGFD 179
Query: 379 RNIFLTTA--VIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAV 436
N FLT + ++ Y + +D A +F +IP+ K FN++I+G + GL SI +
Sbjct: 180 TNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE--KDSVTFNTLITGYEKDGLYTESIHL 237
Query: 437 FREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLNYGIKPQMEHYGCMVDLLAR 496
F +M G +P TF VL A G+Q + G ++D ++
Sbjct: 238 FLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSK 297
Query: 497 DGRLDEAYGLIQSMP 511
R+ E L MP
Sbjct: 298 HDRVLETRMLFDEMP 312
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/602 (38%), Positives = 371/602 (61%), Gaps = 13/602 (2%)
Query: 124 SFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSI--FGYINNAHKVFEGSLARDLVSYNTL 181
+FK QIH + G D + + ++ Y++ A+++ + S L + N++
Sbjct: 18 TFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSM 77
Query: 182 INGYAQVKEPCPALWLFRKMQDSC--IQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKN 239
I + + P + +R++ S ++PD +T + ACT L G Q H + +
Sbjct: 78 IRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRR 137
Query: 240 LGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERAR 299
++ ++T +I++YA+ G ++ +VF+++ ++M++ R G + AR
Sbjct: 138 --GFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCR-TAMVTACARCGDVVFAR 194
Query: 300 QLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLG 359
+LF+ M +RD ++W AMISGY+QVG +AL +F M+ G+ + V M++VL AC LG
Sbjct: 195 KLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLG 254
Query: 360 ALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNS 419
ALD G+ H YIE + L T ++D+YAKCG ++ A+ VF+ + + K V ++S
Sbjct: 255 ALDQGRWAHS-YIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEE--KNVYTWSS 311
Query: 420 IISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLN-Y 478
++GLA +G GE + +F M+ G+ P+ VTFV+VL CS G V+EG++ F+SM N +
Sbjct: 312 ALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEF 371
Query: 479 GIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIA 538
GI+PQ+EHYGC+VDL AR GRL++A +IQ MP ++ +W +LL A R+++N ++G +A
Sbjct: 372 GIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLA 431
Query: 539 GQKLLDLE-PDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTLH 597
+K+L+LE +HGA YVLLSN+ A++ W+ VR+ M G++K PG S +E NG +H
Sbjct: 432 SKKMLELETANHGA-YVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVH 490
Query: 598 RFLASKKSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVVFDVDEEEKETVVSYHSEKLAL 657
F KSHP+ +I+ + KD++ +L+ AGY +T V+FD+DEEEKE + HSEK A+
Sbjct: 491 EFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAI 550
Query: 658 AFGLINSRSKETIRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKKGNCSCMD 717
AFG+++ + IRI KNLR+CGDCH ++S+I+ REI+VRD RFH FK G+CSC
Sbjct: 551 AFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNG 610
Query: 718 FW 719
FW
Sbjct: 611 FW 612
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 205/435 (47%), Gaps = 78/435 (17%)
Query: 12 LALLESCKSLKQALQIHGQIVHSGLNHHISSSQLISFF----ALSGCKNGLFRSRILFSQ 67
+ALL+S + K+ QIH ++ G + L+ F ALS K + ++IL +
Sbjct: 10 IALLDSGITFKEVRQIHAKLYVDGT---LKDDHLVGHFVKAVALSDHKYLDYANQIL-DR 65
Query: 68 IDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKG-IVSPNNFTFPFVLNSCARLSSFK 126
+ P +F N+++R + +S P+++ Y +LS G + P+N+T F++ +C L +
Sbjct: 66 SEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRE 125
Query: 127 SGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKV-------------------- 166
+G Q+H I+ G + D ++ LI Y+ G +++ HKV
Sbjct: 126 TGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACA 185
Query: 167 -----------FEGSLARDLVSYNTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVA 215
FEG RD +++N +I+GYAQV E AL +F MQ ++ + ++
Sbjct: 186 RCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMIS 245
Query: 216 MFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGM 275
+ SACT+L G+ H+ + +N + + L T ++++YAKCG M A VF M
Sbjct: 246 VLSACTQLGALDQGRWAHSYIERNK--IKITVRLATTLVDLYAKCGDMEKAMEVFWGM-E 302
Query: 276 SKSTAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGK 335
K+ WSS ++G G E+ +LF M Q
Sbjct: 303 EKNVYTWSSALNGLAMNGFGEKCLELFSLMKQD--------------------------- 335
Query: 336 MESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRNIFLT--TAVIDMYAK 393
G+ P+ VT V+VLR C +G +D G+R H + N FG L ++D+YA+
Sbjct: 336 ----GVTPNAVTFVSVLRGCSVVGFVDEGQR-HFDSMRN-EFGIEPQLEHYGCLVDLYAR 389
Query: 394 CGSIDTALSVFYKIP 408
G ++ A+S+ ++P
Sbjct: 390 AGRLEDAVSIIQQMP 404
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 435 bits (1119), Expect = e-121, Method: Compositional matrix adjust.
Identities = 248/707 (35%), Positives = 392/707 (55%), Gaps = 46/707 (6%)
Query: 17 SCKSLKQALQIHGQIVHSGLNHHIS-SSQLISFFALSGCKNGLFRS-RILFSQIDNPNIF 74
S +S+ Q+HG I+ SG S + L++F+ KN S R +F ++ ++
Sbjct: 207 SLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYL----KNQRVDSARKVFDEMTERDVI 262
Query: 75 IWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGCQIHCH 134
WN+++ GY + ++ L ++ ML GI + T V CA G +H
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQMLVSGI-EIDLATIVSVFAGCADSRLISLGRAVHSI 321
Query: 135 IIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVKEPCPA 194
+K + N L+ YS G +++A VF R +VSY ++I GYA+ A
Sbjct: 322 GVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEA 381
Query: 195 LWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVI 254
+ LF +M++ I PD +T A+ + C GK+ H + +N +G ++ + A++
Sbjct: 382 VKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEND--LGFDIFVSNALM 439
Query: 255 NMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWT 314
+MYAKCG M AE V F +M +D++SW
Sbjct: 440 DMYAKCGSMQEAELV--------------------------------FSEMRVKDIISWN 467
Query: 315 AMISGYSQVGGFSQALELFGKM-ESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIE 373
+I GYS+ ++AL LF + E PDE T+ VL AC L A D G+ +H +
Sbjct: 468 TIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMR 527
Query: 374 NVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETS 433
N F + + +++DMYAKCG++ A +F I K + + +I+G HG G+ +
Sbjct: 528 NGYFS-DRHVANSLVDMYAKCGALLLAHMLFDDIAS--KDLVSWTVMIAGYGMHGFGKEA 584
Query: 434 IAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLNY-GIKPQMEHYGCMVD 492
IA+F +M G++ D ++FV++L ACSH GLV+EG +FF M + I+P +EHY C+VD
Sbjct: 585 IALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVD 644
Query: 493 LLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIAGQKLLDLEPDHGAH 552
+LAR G L +AY I++MP ++ IW ALL CR+H + K+ E +K+ +LEP++ +
Sbjct: 645 MLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGY 704
Query: 553 YVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTLHRFLASKKSHPQTKEI 612
YVL++N+ AE +WE+ +++RK + G++K PG S+IE G ++ F+A S+P+T+ I
Sbjct: 705 YVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENI 764
Query: 613 ELMLKDMTMKLKSAGYVPNTVQVVFDVDEEEKETVVSYHSEKLALAFGLINSRSKETIRI 672
E L+ + ++ GY P T + D +E EKE + HSEKLA+A G+I+S + IR+
Sbjct: 765 EAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRV 824
Query: 673 TKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKKGNCSCMDFW 719
TKNLR+CGDCH K +S++ RREI++RD+ RFH FK G+CSC FW
Sbjct: 825 TKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 150/523 (28%), Positives = 253/523 (48%), Gaps = 46/523 (8%)
Query: 10 SLLALLESCKSLKQALQIHGQIVHSGLNHHISSSQLISFFAL--SGCKNGLFRSRILFSQ 67
S+L L KSLK ++ I +G + S L S +L + C + SR+ F +
Sbjct: 99 SVLQLCADSKSLKDGKEVDNFIRGNGF---VIDSNLGSKLSLMYTNCGDLKEASRV-FDE 154
Query: 68 IDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKS 127
+ WN LM ++S ++ L+ M+S G V +++TF V S + L S
Sbjct: 155 VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSG-VEMDSYTFSCVSKSFSSLRSVHG 213
Query: 128 GCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQ 187
G Q+H I+K G + N+L+ FY +++A KVF+ RD++S+N++INGY
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273
Query: 188 VKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNM 247
L +F +M S I+ D T V++F+ C + +G+ H++ K C
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVK--ACFSRED 331
Query: 248 LLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQ 307
+++MY+KCG ++ A+ VF M +S +++SMI+GY REG A +LF++M++
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMS-DRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 308 RDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRL 367
GI PD T+ AVL C LD GKR+
Sbjct: 391 E-------------------------------GISPDVYTVTAVLNCCARYRLLDEGKRV 419
Query: 368 HQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQH 427
H+ EN + G +IF++ A++DMYAKCGS+ A VF ++ +K + +N+II G +++
Sbjct: 420 HEWIKENDL-GFDIFVSNALMDMYAKCGSMQEAELVFSEM--RVKDIISWNTIIGGYSKN 476
Query: 428 GLGETSIAVFR-EMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLNYGIKPQMEH 486
++++F +E PD T VL AC+ ++G++ ++ G
Sbjct: 477 CYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHV 536
Query: 487 YGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLH 529
+VD+ A+ G L A+ L + + V W ++A +H
Sbjct: 537 ANSLVDMYAKCGALLLAHMLFDDIA-SKDLVSWTVMIAGYGMH 578
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 166/342 (48%), Gaps = 11/342 (3%)
Query: 10 SLLALLESC---KSLKQALQIHGQIVHSGLNHHI-SSSQLISFFALSGCKNGLFRSRILF 65
++ A+L C + L + ++H I + L I S+ L+ +A G + + ++F
Sbjct: 399 TVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCG---SMQEAELVF 455
Query: 66 SQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSF 125
S++ +I WNT++ GYS++ EAL L+ +L + SP+ T VL +CA LS+F
Sbjct: 456 SEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAF 515
Query: 126 KSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGY 185
G +IH +I++ G D + N+L+ Y+ G + AH +F+ ++DLVS+ +I GY
Sbjct: 516 DKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGY 575
Query: 186 AQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGS 245
A+ LF +M+ + I+ D +FV++ AC+ G +F ++ +
Sbjct: 576 GMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECK-IEP 634
Query: 246 NMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFD-- 303
+ +++M A+ G + A R M + W +++ G ++ A ++ +
Sbjct: 635 TVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKV 694
Query: 304 -QMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPD 344
+++ + + M + Y++ + Q L ++ G+ +
Sbjct: 695 FELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKN 736
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 435 bits (1118), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/614 (38%), Positives = 362/614 (58%), Gaps = 22/614 (3%)
Query: 116 LNSCARLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINN--AHKVFEGSLAR 173
L+ C L+ K QIH H+++ GL+ +I LI + G + A +V E R
Sbjct: 56 LDDCINLNQIK---QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFR 112
Query: 174 DLVSYNTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFH 233
+ + +I GYA + A+ ++ M+ I P +FTF A+ AC + D +G+QFH
Sbjct: 113 NPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFH 172
Query: 234 AVVYKNLG-C---VGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGY 289
A ++ G C VG+ M I+MY KC ++ A +VF M + +W+ +I+ Y
Sbjct: 173 AQTFRLRGFCFVYVGNTM------IDMYVKCESIDCARKVFDEMP-ERDVISWTELIAAY 225
Query: 290 TREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMV 349
R G +E A +LF+ + +D+V+WTAM++G++Q +ALE F +ME GI DEVT+
Sbjct: 226 ARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVA 285
Query: 350 AVLRACVGLGALDFGKRLHQ-QYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIP 408
+ AC LGA + R Q ++ + +A+IDMY+KCG+++ A++VF +
Sbjct: 286 GYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSM- 344
Query: 409 KNLKTVSLFNSIISGLAQHGLGETSIAVFREMELMG-LKPDGVTFVTVLCACSHGGLVEE 467
N K V ++S+I GLA HG + ++ +F M +KP+ VTFV L ACSH GLV++
Sbjct: 345 -NNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQ 403
Query: 468 GKQFFESML-NYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAAC 526
G+Q F+SM +G++P +HY CMVDLL R GRL EA LI++M + + +W ALL AC
Sbjct: 404 GRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGAC 463
Query: 527 RLHRNAKIGEIAGQKLLDLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPG 586
R+H N +I EIA + L +LEPD +Y+LLSN+ A W +VRKL+ + G++K P
Sbjct: 464 RIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPA 523
Query: 587 WSYI-EHNGTLHRFLASKKSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVVFDVDEEEKE 645
S++ + NG +H+F +HP + +I+ L+++ +L GY P+ V +DV + K
Sbjct: 524 VSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKR 583
Query: 646 TVVSYHSEKLALAFGLINSRSKETIRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRF 705
++ H+EKLALAF L+ + TI I KNLR+C DCH +L SE+ + I++RD +RF
Sbjct: 584 LILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRF 643
Query: 706 HLFKKGNCSCMDFW 719
H F+ G+CSC DFW
Sbjct: 644 HHFRSGDCSCGDFW 657
Score = 132 bits (333), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 184/429 (42%), Gaps = 67/429 (15%)
Query: 9 SSLLALLESCKSLKQALQIHGQIVHSGLNHHISS-SQLISFFALSGCKNGLFRSRILFS- 66
SSL++ L+ C +L Q QIHG ++ GL+ ++LI G + R++
Sbjct: 50 SSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPV 109
Query: 67 QIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFK 126
Q NP F+W ++RGY+ EA+ +Y M K ++P +FTF +L +C +
Sbjct: 110 QFRNP--FLWTAVIRGYAIEGKFDEAIAMYGCM-RKEEITPVSFTFSALLKACGTMKDLN 166
Query: 127 SGCQIH---------CHIIKFGLEFDLFIR----------------------NALIHFYS 155
G Q H C + D++++ LI Y+
Sbjct: 167 LGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYA 226
Query: 156 IFGYINNAHKVFEGSLARDLVSYNTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVA 215
G + A ++FE +D+V++ ++ G+AQ +P AL F +M+ S I+ D T
Sbjct: 227 RVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAG 286
Query: 216 MFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGM 275
SAC +L + + + K+ ++++ +A+I+MY+KCG + A VF +M
Sbjct: 287 YISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMN- 345
Query: 276 SKSTAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGK 335
+K+ +SSMI G G+ + A LF M V+ T
Sbjct: 346 NKNVFTYSSMILGLATHGRAQEALHLFHYM-----VTQTE-------------------- 380
Query: 336 MESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCG 395
I P+ VT V L AC G +D G+++ + T ++D+ + G
Sbjct: 381 -----IKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTG 435
Query: 396 SIDTALSVF 404
+ AL +
Sbjct: 436 RLQEALELI 444
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 106/253 (41%), Gaps = 41/253 (16%)
Query: 10 SLLALLESCKSLKQALQIHGQIVHSGLNHHISSSQLISFFALSGCKNGLFRSRILFSQID 69
S A L + K +A+QI + +S +H + S LI + S C N + + +F ++
Sbjct: 289 SACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMY--SKCGN-VEEAVNVFMSMN 345
Query: 70 NPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGC 129
N N+F +++++ G + QEAL L+ M+++ + PN TF L +C+ G
Sbjct: 346 NKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGR 405
Query: 130 QIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVK 189
Q+ FD Y FG RD Y +++ +
Sbjct: 406 QV----------FD--------SMYQTFGV----------QPTRD--HYTCMVDLLGRTG 435
Query: 190 EPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYK-NLGCVGSNML 248
AL L + M ++P + A+ AC N+P I + +++ +G+ +L
Sbjct: 436 RLQEALELIKTMS---VEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYIL 492
Query: 249 LKTAVINMYAKCG 261
L N+YA G
Sbjct: 493 LS----NVYASAG 501
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 434 bits (1116), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/637 (36%), Positives = 352/637 (55%), Gaps = 47/637 (7%)
Query: 89 PQEALVLYTSM--LSKGIVSPNNFTFPFVLNSCARLSSFKSGCQIHCHIIKFGLEFDLFI 146
P L+L TS L + + + +L C G +H HI++ D+ +
Sbjct: 38 PSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVM 97
Query: 147 RNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVKEPCPALWLFRKMQDSCI 206
N L++ Y+ G + A KVFE RD V++ TLI+GY+Q PC AL F +M
Sbjct: 98 GNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGY 157
Query: 207 QPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMA 266
P+ FT ++ A G Q H CV KCG
Sbjct: 158 SPNEFTLSSVIKAAAAERRGCCGHQLHGF------CV---------------KCGF---- 192
Query: 267 ERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGF 326
+ S+++ YTR G ++ A+ +FD ++ R+ VSW A+I+G+++ G
Sbjct: 193 ---------DSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243
Query: 327 SQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIEN----VVFGRNIF 382
+ALELF M G P + ++ AC G L+ GK +H I++ V F N
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 303
Query: 383 LTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFREMEL 442
L DMYAK GSI A +F ++ K + V +NS+++ AQHG G+ ++ F EM
Sbjct: 304 L-----DMYAKSGSIHDARKIFDRLAK--RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRR 356
Query: 443 MGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLNYGIKPQMEHYGCMVDLLARDGRLDE 502
+G++P+ ++F++VL ACSH GL++EG ++E M GI P+ HY +VDLL R G L+
Sbjct: 357 VGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNR 416
Query: 503 AYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIAGQKLLDLEPDHGAHYVLLSNMLAE 562
A I+ MP + + IW+ALL ACR+H+N ++G A + + +L+PD +V+L N+ A
Sbjct: 417 ALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYAS 476
Query: 563 TYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTLHRFLASKKSHPQTKEIELMLKDMTMK 622
RW +A +VRK M +SG++K P S++E +H F+A+ + HPQ +EI +++ K
Sbjct: 477 GGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAK 536
Query: 623 LKSAGYVPNTVQVVFDVDEEEKETVVSYHSEKLALAFGLINSRSKETIRITKNLRICGDC 682
+K GYVP+T V+ VD++E+E + YHSEK+ALAF L+N+ TI I KN+R+CGDC
Sbjct: 537 IKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDC 596
Query: 683 HLAFKLLSEIYRREIMVRDAIRFHLFKKGNCSCMDFW 719
H A KL S++ REI+VRD RFH FK GNCSC D+W
Sbjct: 597 HTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/478 (25%), Positives = 220/478 (46%), Gaps = 53/478 (11%)
Query: 14 LLESCKSLKQALQ---IHGQIVHSGLNHHIS-SSQLISFFALSGCKNGLFRSRILFSQID 69
LL+ C K +Q +H I+ S H I + L++ +A G L +R +F ++
Sbjct: 66 LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG---SLEEARKVFEKMP 122
Query: 70 NPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGC 129
+ W TL+ GYS+ D P +AL+ + ML G SPN FT V+ + A G
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFG-YSPNEFTLSSVIKAAAAERRGCCGH 181
Query: 130 QIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVK 189
Q+H +K G + ++ + +AL+ Y+ +G +++A VF+ +R+ VS+N LI G+A+
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241
Query: 190 EPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKN---LGCVGSN 246
AL LF+ M +P F++ ++F AC+ GK HA + K+ L N
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 301
Query: 247 MLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMD 306
LL +MYAK G ++ A ++F + + +W+S+++
Sbjct: 302 TLL-----DMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLT------------------- 336
Query: 307 QRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKR 366
Y+Q G +A+ F +M +GI P+E++ ++VL AC G LD G
Sbjct: 337 ------------AYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWH 384
Query: 367 LHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQ 426
++ ++ + T V+D+ + G ++ AL ++P T +++ ++++
Sbjct: 385 YYELMKKDGIVPEAWHYVT-VVDLLGRAGDLNRALRFIEEMPIE-PTAAIWKALLNACRM 442
Query: 427 HGLGETSIAVFREMELMGLKPDGV-TFVTVLCACSHGGLVEEGKQFFESMLNYGIKPQ 483
H T + + + L PD V + + GG + + + M G+K +
Sbjct: 443 H--KNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKE 498
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust.
Identities = 241/661 (36%), Positives = 365/661 (55%), Gaps = 58/661 (8%)
Query: 106 SPNNFTFPF--VLNSCARLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNA 163
SP F VL++ + + ++ +H II L + + L+ Y+ + +A
Sbjct: 37 SPQETVFLLGQVLDTYPDIRTLRT---VHSRIILEDLRCNSSLGVKLMRAYASLKDVASA 93
Query: 164 HKVFEGSLARDLVSYNTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTEL 223
KVF+ R+++ N +I Y + +F M ++PD +TF + AC+
Sbjct: 94 RKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCS 153
Query: 224 NDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWS 283
IG++ H K +G + S + + +++MY KCG ++ A V M + +W+
Sbjct: 154 GTIVIGRKIHGSATK-VG-LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS-RRDVVSWN 210
Query: 284 SMISGYTREGKIERA-------------------------------------RQLFDQMD 306
S++ GY + + + A + +F +M
Sbjct: 211 SLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMG 270
Query: 307 QRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKR 366
++ LVSW MI Y + +A+EL+ +ME+ G PD V++ +VL AC AL GK+
Sbjct: 271 KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKK 330
Query: 367 LHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKT--VSLFNSIISGL 424
+H YIE N+ L A+IDMYAKCG ++ A VF +N+K+ V + ++IS
Sbjct: 331 IHG-YIERKKLIPNLLLENALIDMYAKCGCLEKARDVF----ENMKSRDVVSWTAMISAY 385
Query: 425 AQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLN-YGIKPQ 483
G G ++A+F +++ GL PD + FVT L ACSH GL+EEG+ F+ M + Y I P+
Sbjct: 386 GFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPR 445
Query: 484 MEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIAGQKLL 543
+EH CMVDLL R G++ EAY IQ M + N +W ALL ACR+H + IG +A KL
Sbjct: 446 LEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLF 505
Query: 544 DLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTLHRFLASK 603
L P+ +YVLLSN+ A+ RWEE +R +M G++K PG S +E N +H FL
Sbjct: 506 QLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGD 565
Query: 604 KSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVVFDVDEEEKETVVSYHSEKLALAFGLIN 663
+SHPQ+ EI L + K+K GYVP++ + DV+EE+KET ++ HSEKLA+ F L+N
Sbjct: 566 RSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMN 625
Query: 664 SRSKE-----TIRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKKGNCSCMDF 718
++ +E TIRITKNLRICGDCH+A KL+S+I REI++RD RFH+F+ G CSC D+
Sbjct: 626 TKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDY 685
Query: 719 W 719
W
Sbjct: 686 W 686
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 188/422 (44%), Gaps = 39/422 (9%)
Query: 14 LLESCKSLKQALQIHGQIVHSGLNHHISSSQLISFFALSGCKNGLFRSRILFSQIDNPNI 73
+L++ ++ +H +I+ L +SS + + +R +F +I N+
Sbjct: 48 VLDTYPDIRTLRTVHSRIILEDL--RCNSSLGVKLMRAYASLKDVASARKVFDEIPERNV 105
Query: 74 FIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGCQIHC 133
I N ++R Y + E + ++ +M V P+++TFP VL +C+ + G +IH
Sbjct: 106 IIINVMIRSYVNNGFYGEGVKVFGTMCGCN-VRPDHYTFPCVLKACSCSGTIVIGRKIHG 164
Query: 134 HIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVKEPCP 193
K GL LF+ N L+ Y G+++ A V + RD+VS+N+L+ GYAQ +
Sbjct: 165 SATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDD 224
Query: 194 ALWLFRKMQDSCIQPDAFTFVAMFSACTELNDP----------RIGKQFHAVVYKNLGCV 243
AL + R+M+ I DA T ++ A + ++GK+ +G
Sbjct: 225 ALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVY 284
Query: 244 GSNMLLKTAVINMYAKC---GLMNMAERVFSTMGMSKSTAAWS----------------- 283
N + AV +Y++ G A + S + T+A S
Sbjct: 285 MKNAMPVEAV-ELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPN 343
Query: 284 -----SMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMES 338
++I Y + G +E+AR +F+ M RD+VSWTAMIS Y G A+ LF K++
Sbjct: 344 LLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQD 403
Query: 339 LGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSID 398
G+ PD + V L AC G L+ G+ + ++ + ++D+ + G +
Sbjct: 404 SGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVK 463
Query: 399 TA 400
A
Sbjct: 464 EA 465
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 138/289 (47%), Gaps = 10/289 (3%)
Query: 2 KRLVLEHSSLLALLESCKSLKQALQIHGQIVHSGLNHHISS-SQLISFFALSGCKNGLFR 60
+R V+ +SL+ + AL++ ++ ++H + + L+ + + +N ++
Sbjct: 203 RRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYV 262
Query: 61 SRILFSQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCA 120
+ F ++ ++ WN ++ Y ++ P EA+ LY+ M + G P+ + VL +C
Sbjct: 263 KDMFF-KMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGF-EPDAVSITSVLPACG 320
Query: 121 RLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNT 180
S+ G +IH +I + L +L + NALI Y+ G + A VFE +RD+VS+
Sbjct: 321 DTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTA 380
Query: 181 LINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTE---LNDPRIGKQFHAVVY 237
+I+ Y C A+ LF K+QDS + PD+ FV +AC+ L + R + Y
Sbjct: 381 MISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHY 440
Query: 238 KNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMI 286
K + + ++++ + G + A R M M + W +++
Sbjct: 441 K----ITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALL 485
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 428 bits (1101), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/596 (39%), Positives = 366/596 (61%), Gaps = 16/596 (2%)
Query: 130 QIHCHIIKFGLEFD--LFIRNALIH-FYSIFGYINNAHKVFEGSLARDLVSYNTLINGYA 186
QIH I++ L + N +H Y+ G I ++ +F ++ DL + IN +
Sbjct: 47 QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 106
Query: 187 QVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSN 246
A L+ ++ S I P+ FTF ++ +C+ + GK H V K G +G +
Sbjct: 107 INGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIHTHVLK-FG-LGID 160
Query: 247 MLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMD 306
+ T ++++YAK G + A++VF M +S + ++MI+ Y ++G +E AR LFD M
Sbjct: 161 PYVATGLVDVYAKGGDVVSAQKVFDRMP-ERSLVSSTAMITCYAKQGNVEAARALFDSMC 219
Query: 307 QRDLVSWTAMISGYSQVGGFSQALELFGKMESLG-IHPDEVTMVAVLRACVGLGALDFGK 365
+RD+VSW MI GY+Q G + AL LF K+ + G PDE+T+VA L AC +GAL+ G+
Sbjct: 220 ERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGR 279
Query: 366 RLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLA 425
+H ++++ N+ + T +IDMY+KCGS++ A+ VF P+ K + +N++I+G A
Sbjct: 280 WIHV-FVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPR--KDIVAWNAMIAGYA 336
Query: 426 QHGLGETSIAVFREME-LMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESM-LNYGIKPQ 483
HG + ++ +F EM+ + GL+P +TF+ L AC+H GLV EG + FESM YGIKP+
Sbjct: 337 MHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPK 396
Query: 484 MEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIAGQKLL 543
+EHYGC+V LL R G+L AY I++M DA+SV+W ++L +C+LH + +G+ + L+
Sbjct: 397 IEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLI 456
Query: 544 DLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTLHRFLASK 603
L + YVLLSN+ A +E +VR LM + GI K PG S IE +H F A
Sbjct: 457 GLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGD 516
Query: 604 KSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVVFDVDEEEKETVVSYHSEKLALAFGLIN 663
+ H ++KEI ML+ ++ ++KS GYVPNT V+ D++E EKE + HSE+LA+A+GLI+
Sbjct: 517 REHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLIS 576
Query: 664 SRSKETIRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKKGNCSCMDFW 719
++ ++I KNLR+C DCH KL+S+I R+I++RD RFH F G+CSC DFW
Sbjct: 577 TKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 205/452 (45%), Gaps = 74/452 (16%)
Query: 11 LLALLESCKSLKQALQIHGQIVHSGLNHHISSSQLISFFALSGCKNGLFR-SRILFSQID 69
L L++ +S+ + LQIH I+ L H L + +G R S LF Q
Sbjct: 32 LAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTI 91
Query: 70 NPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGC 129
+P++F++ + S + +A +LY +LS I +PN FTF +L SC S KSG
Sbjct: 92 DPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEI-NPNEFTFSSLLKSC----STKSGK 146
Query: 130 QIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVF----EGSLA------------- 172
IH H++KFGL D ++ L+ Y+ G + +A KVF E SL
Sbjct: 147 LIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQG 206
Query: 173 --------------RDLVSYNTLINGYAQVKEPCPALWLFRK-MQDSCIQPDAFTFVAMF 217
RD+VS+N +I+GYAQ P AL LF+K + + +PD T VA
Sbjct: 207 NVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAAL 266
Query: 218 SACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSK 277
SAC+++ G+ H V + + N+ + T +I+MY+KCG + A VF+ K
Sbjct: 267 SACSQIGALETGRWIHVFVKSSR--IRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTP-RK 323
Query: 278 STAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKME 337
AW++MI+GY + GYSQ AL LF +M+
Sbjct: 324 DIVAWNAMIAGYA--------------------------MHGYSQ-----DALRLFNEMQ 352
Query: 338 SL-GIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGS 396
+ G+ P ++T + L+AC G ++ G R+ + + I ++ + + G
Sbjct: 353 GITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQ 412
Query: 397 IDTALSVFYKIPKNLKTVSLFNSIISGLAQHG 428
+ A + + +V L++S++ HG
Sbjct: 413 LKRAYETIKNMNMDADSV-LWSSVLGSCKLHG 443
Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 134/299 (44%), Gaps = 46/299 (15%)
Query: 40 ISSSQLISFFALSGCKNGLFRSRILFSQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSM 99
+SS+ +I+ +A G + +R LF + +I WN ++ GY++ P +AL+L+ +
Sbjct: 193 VSSTAMITCYAKQG---NVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 100 LSKGIVSPNNFTFPFVLNSCARLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGY 159
L++G P+ T L++C+++ + ++G IH + + ++ + LI YS G
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS 309
Query: 160 INNAHKVFEGSLARDLVSYNTLINGYAQVKEPCPALWLFRKMQD-SCIQPDAFTFVAMFS 218
+ A VF + +D+V++N +I GYA AL LF +MQ + +QP TF+
Sbjct: 310 LEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQ 369
Query: 219 ACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTM----G 274
AC A GL+N R+F +M G
Sbjct: 370 AC-------------------------------------AHAGLVNEGIRIFESMGQEYG 392
Query: 275 MSKSTAAWSSMISGYTREGKIERARQLFDQMD-QRDLVSWTAMISGYSQVGGFSQALEL 332
+ + ++S R G+++RA + M+ D V W++++ G F E+
Sbjct: 393 IKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEI 451
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 424 bits (1091), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/642 (36%), Positives = 365/642 (56%), Gaps = 56/642 (8%)
Query: 97 TSMLSKGI----------VSPNNFTFPF--------VLNSCARLSSFKSGCQIHCHIIKF 138
TS LS+ I VSP ++ F +L CAR + H II+
Sbjct: 31 TSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRI 90
Query: 139 GLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVKEPCPALWLF 198
LE D+ + N LI+ YS G++ A +VF+G L R LVS+NT+I Y + + AL +F
Sbjct: 91 DLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIF 150
Query: 199 RKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYA 258
+M++ + FT ++ SAC D K+ H + K C+ N+ + TA++++YA
Sbjct: 151 LEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKT--CIDLNLYVGTALLDLYA 208
Query: 259 KCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMIS 318
KCG+ I+ A Q+F+ M + V+W++M++
Sbjct: 209 KCGM--------------------------------IKDAVQVFESMQDKSSVTWSSMVA 236
Query: 319 GYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFG 378
GY Q + +AL L+ + + + + ++ T+ +V+ AC L AL GK++H I FG
Sbjct: 237 GYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHA-VICKSGFG 295
Query: 379 RNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFR 438
N+F+ ++ +DMYAKCGS+ + +F ++ + K + L+N+IISG A+H + + +F
Sbjct: 296 SNVFVASSAVDMYAKCGSLRESYIIFSEVQE--KNLELWNTIISGFAKHARPKEVMILFE 353
Query: 439 EMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESM-LNYGIKPQMEHYGCMVDLLARD 497
+M+ G+ P+ VTF ++L C H GLVEEG++FF+ M YG+ P + HY CMVD+L R
Sbjct: 354 KMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRA 413
Query: 498 GRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIAGQKLLDLEPDHGAHYVLLS 557
G L EAY LI+S+P+D + IW +LLA+CR+++N ++ E+A +KL +LEP++ ++VLLS
Sbjct: 414 GLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLS 473
Query: 558 NMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTLHRFLASKKSHPQTKEIELMLK 617
N+ A +WEE + RKL+ D ++K G S+I+ +H F + HP+ +EI L
Sbjct: 474 NIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLD 533
Query: 618 DMTMKLKSAGYVPNTVQVVFDVDEEEKETVVSYHSEKLALAFGLINSRSKETIRITKNLR 677
++ +K + GY P+ + DV+ +KE ++ HSEKLAL FGL+ +RI KNLR
Sbjct: 534 NLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLR 593
Query: 678 ICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKKGNCSCMDFW 719
IC DCH K S RR I+VRD RFH F G+CSC DFW
Sbjct: 594 ICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 207/433 (47%), Gaps = 50/433 (11%)
Query: 11 LLALLESCKSLKQALQIHGQIVHSGLNHHISSSQLISFFALSGCKNGLFR-SRILFSQID 69
+L L ++ +A HG+I+ L ++ L++ + K G +R +F +
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVT---LLNVLINAYSKCGFVELARQVFDGML 123
Query: 70 NPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGC 129
++ WNT++ Y+R+ EAL ++ M ++G + FT VL++C
Sbjct: 124 ERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGF-KFSEFTISSVLSACGVNCDALECK 182
Query: 130 QIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVK 189
++HC +K ++ +L++ AL+ Y+ G I +A +VFE + V++++++ GY Q K
Sbjct: 183 KLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNK 242
Query: 190 EPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLL 249
AL L+R+ Q ++ + FT ++ AC+ L GKQ HAV+ K+ GSN+ +
Sbjct: 243 NYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKS--GFGSNVFV 300
Query: 250 KTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQRD 309
++ ++MYAKCG + + +FS + K+ W+++ISG+ + + + LF++M Q
Sbjct: 301 ASSAVDMYAKCGSLRESYIIFSEV-QEKNLELWNTIISGFAKHARPKEVMILFEKMQQD- 358
Query: 310 LVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQ 369
G+HP+EVT ++L C G ++ G+R +
Sbjct: 359 ------------------------------GMHPNEVTFSSLLSVCGHTGLVEEGRRFFK 388
Query: 370 QYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGL 429
N+ + ++D+ + G + A + IP + T S++ S+++
Sbjct: 389 LMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFD-PTASIWGSLLA------- 440
Query: 430 GETSIAVFREMEL 442
S V++ +EL
Sbjct: 441 ---SCRVYKNLEL 450
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 10/133 (7%)
Query: 2 KRLVLEH-----SSLLALLESCKSLKQALQIHGQIVHSGLNHHI-SSSQLISFFALSGCK 55
+R+ LE SS++ + +L + Q+H I SG ++ +S + +A G
Sbjct: 255 QRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCG-- 312
Query: 56 NGLFRSRILFSQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFV 115
L S I+FS++ N+ +WNT++ G+++ P+E ++L+ M G+ PN TF +
Sbjct: 313 -SLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGM-HPNEVTFSSL 370
Query: 116 LNSCARLSSFKSG 128
L+ C + G
Sbjct: 371 LSVCGHTGLVEEG 383
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/530 (41%), Positives = 337/530 (63%), Gaps = 12/530 (2%)
Query: 197 LFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINM 256
++ +M++ + PD TF + + +G++ HA + L + + ++T+++NM
Sbjct: 49 VYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQIL--LFGLDKDPFVRTSLLNM 106
Query: 257 YAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAM 316
Y+ CG + A+RVF G SK AW+S+++ Y + G I+ AR+LFD+M +R+++SW+ +
Sbjct: 107 YSSCGDLRSAQRVFDDSG-SKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCL 165
Query: 317 ISGYSQVGGFSQALELFGKME-----SLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQY 371
I+GY G + +AL+LF +M+ + P+E TM VL AC LGAL+ GK +H Y
Sbjct: 166 INGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHA-Y 224
Query: 372 IENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGLGE 431
I+ +I L TA+IDMYAKCGS++ A VF + K V ++++I LA +GL +
Sbjct: 225 IDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSK-KDVKAYSAMICCLAMYGLTD 283
Query: 432 TSIAVFREMELM-GLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLN-YGIKPQMEHYGC 489
+F EM + P+ VTFV +L AC H GL+ EGK +F+ M+ +GI P ++HYGC
Sbjct: 284 ECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGC 343
Query: 490 MVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIAGQKLLDLEPDH 549
MVDL R G + EA I SMP + + +IW +LL+ R+ + K E A ++L++L+P +
Sbjct: 344 MVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMN 403
Query: 550 GAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTLHRFLASKKSHPQT 609
YVLLSN+ A+T RW E + +R M+ GI K PG SY+E G +H F+ +S ++
Sbjct: 404 SGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQES 463
Query: 610 KEIELMLKDMTMKLKSAGYVPNTVQVVFDVDEEEKETVVSYHSEKLALAFGLINSRSKET 669
+ I ML ++ +L+ AGYV +T +V+ D++E++KE +SYHSEKLA+AF L+ +R
Sbjct: 464 ERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTP 523
Query: 670 IRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKKGNCSCMDFW 719
+RI KNLRICGDCHL K++S+++ REI+VRD RFH F+ G+CSC DFW
Sbjct: 524 VRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 180/389 (46%), Gaps = 73/389 (18%)
Query: 74 FIWNTLMRGYSRS-DSPQE--ALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGCQ 130
F+WN ++R + SPQ + +Y M + VSP+ TFPF+L S G +
Sbjct: 25 FLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHR-VSPDFHTFPFLLPSFHNPLHLPLGQR 83
Query: 131 IHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQ--- 187
H I+ FGL+ D F+R +L++ YS G + +A +VF+ S ++DL ++N+++N YA+
Sbjct: 84 THAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGL 143
Query: 188 ----------------VKEPC------------PALWLFRKMQ-----DSCIQPDAFTFV 214
+ C AL LFR+MQ ++ ++P+ FT
Sbjct: 144 IDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMS 203
Query: 215 AMFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMG 274
+ SAC L GK HA + K V +++L TA+I+MYAKCG + A+RVF+ +G
Sbjct: 204 TVLSACGRLGALEQGKWVHAYIDKYH--VEIDIVLGTALIDMYAKCGSLERAKRVFNALG 261
Query: 275 MSKSTAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFG 334
K A+S+MI G + QLF +M D
Sbjct: 262 SKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSD------------------------- 296
Query: 335 KMESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKC 394
I+P+ VT V +L ACV G ++ GK + IE +I ++D+Y +
Sbjct: 297 -----NINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRS 351
Query: 395 GSIDTALSVFYKIPKNLKTVSLFNSIISG 423
G I A S +P V ++ S++SG
Sbjct: 352 GLIKEAESFIASMPME-PDVLIWGSLLSG 379
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 165/343 (48%), Gaps = 16/343 (4%)
Query: 9 SSLLALLESCKSLKQALQIHGQIVHSGLNHHISSSQLISFFALSGCKNGLFRSRILFSQI 68
+SLL + SC L+ A ++ SG + + +++ +A +G + +R LF ++
Sbjct: 101 TSLLNMYSSCGDLRSAQRVFDD---SGSKDLPAWNSVVNAYAKAGLIDD---ARKLFDEM 154
Query: 69 DNPNIFIWNTLMRGYSRSDSPQEALVLYTSM----LSKGIVSPNNFTFPFVLNSCARLSS 124
N+ W+ L+ GY +EAL L+ M ++ V PN FT VL++C RL +
Sbjct: 155 PERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGA 214
Query: 125 FKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEG-SLARDLVSYNTLIN 183
+ G +H +I K+ +E D+ + ALI Y+ G + A +VF +D+ +Y+ +I
Sbjct: 215 LEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMIC 274
Query: 184 GYAQVKEPCPALWLFRKMQDS-CIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGC 242
A LF +M S I P++ TFV + AC GK + ++ + G
Sbjct: 275 CLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFG- 333
Query: 243 VGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKI---ERAR 299
+ ++ ++++Y + GL+ AE ++M M W S++SG G I E A
Sbjct: 334 ITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGAL 393
Query: 300 QLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIH 342
+ ++D + ++ + + Y++ G + + + +ME GI+
Sbjct: 394 KRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGIN 436
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/611 (36%), Positives = 361/611 (59%), Gaps = 40/611 (6%)
Query: 112 FPFVLNSCARLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSL 171
+ +LN+C + + G ++H H+IK ++R L+ FY + +A KV +
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 172 ARDLVSYNTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQ 231
+++VS+ +I+ Y+Q AL +F +M S +P+ FTF + ++C + +GKQ
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 232 FHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTR 291
H ++ K S++ + +++++MYAK
Sbjct: 175 IHGLIVK--WNYDSHIFVGSSLLDMYAKA------------------------------- 201
Query: 292 EGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAV 351
G+I+ AR++F+ + +RD+VS TA+I+GY+Q+G +ALE+F ++ S G+ P+ VT ++
Sbjct: 202 -GQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASL 260
Query: 352 LRACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNL 411
L A GL LD GK+ H + + + L ++IDMY+KCG++ A +F +P+
Sbjct: 261 LTALSGLALLDHGKQAHCHVLRRELPFYAV-LQNSLIDMYSKCGNLSYARRLFDNMPE-- 317
Query: 412 KTVSLFNSIISGLAQHGLGETSIAVFREM-ELMGLKPDGVTFVTVLCACSHGGLVEEGKQ 470
+T +N+++ G ++HGLG + +FR M + +KPD VT + VL CSHG + + G
Sbjct: 318 RTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLN 377
Query: 471 FFESML--NYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRL 528
F+ M+ YG KP EHYGC+VD+L R GR+DEA+ I+ MP + + +LL ACR+
Sbjct: 378 IFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRV 437
Query: 529 HRNAKIGEIAGQKLLDLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWS 588
H + IGE G++L+++EP++ +YV+LSN+ A RW + VR +M + K PG S
Sbjct: 438 HLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRS 497
Query: 589 YIEHNGTLHRFLASKKSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVVFDVDEEEKETVV 648
+I+H TLH F A+ ++HP+ +E+ +K++++K+K AGYVP+ V++DVDEE+KE ++
Sbjct: 498 WIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKML 557
Query: 649 SYHSEKLALAFGLINSRSKETIRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLF 708
HSEKLAL FGLI + IR+ KNLRIC DCH K+ S+++ RE+ +RD RFH
Sbjct: 558 LGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQI 617
Query: 709 KKGNCSCMDFW 719
G CSC D+W
Sbjct: 618 VDGICSCGDYW 628
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 205/425 (48%), Gaps = 53/425 (12%)
Query: 13 ALLESC---KSLKQALQIHGQIVHSG-LNHHISSSQLISFFALSGCKNGLFRSRILFSQI 68
ALL +C ++L+ ++H ++ + L ++L+ F+ C L +R + ++
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDC---LEDARKVLDEM 113
Query: 69 DNPNIFIWNTLMRGYSRSDSPQEALVLYTSML-SKGIVSPNNFTFPFVLNSCARLSSFKS 127
N+ W ++ YS++ EAL ++ M+ S G PN FTF VL SC R S
Sbjct: 114 PEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDG--KPNEFTFATVLTSCIRASGLGL 171
Query: 128 GCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQ 187
G QIH I+K+ + +F+ ++L+ Y+ G I A ++FE RD+VS +I GYAQ
Sbjct: 172 GKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQ 231
Query: 188 VKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNM 247
+ AL +F ++ + P+ T+ ++ +A + L GKQ H V + +
Sbjct: 232 LGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRE--LPFYA 289
Query: 248 LLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQM-D 306
+L+ ++I+MY+KCG ++ A R+F M ++ +W++M+ GY++ G +LF M D
Sbjct: 290 VLQNSLIDMYSKCGNLSYARRLFDNMP-ERTAISWNAMLVGYSKHGLGREVLELFRLMRD 348
Query: 307 QR----DLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALD 362
++ D V+ A++SG S G+ME G++ + G+ A +
Sbjct: 349 EKRVKPDAVTLLAVLSGCSH-----------GRMEDTGLNIFD-----------GMVAGE 386
Query: 363 FGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIIS 422
+G + ++ +G ++DM + G ID A ++P T + S++
Sbjct: 387 YGTKPGTEH-----YG-------CIVDMLGRAGRIDEAFEFIKRMPSK-PTAGVLGSLLG 433
Query: 423 GLAQH 427
H
Sbjct: 434 ACRVH 438
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 422 bits (1085), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/659 (34%), Positives = 357/659 (54%), Gaps = 45/659 (6%)
Query: 65 FSQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSS 124
F + + N+ +WN ++ Y D + + ++ M + IV PN +T+P +L +C RL
Sbjct: 447 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV-PNQYTYPSILKTCIRLGD 505
Query: 125 FKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLING 184
+ G QIH IIK + + ++ + LI Y+ G ++ A + +D+VS+ T+I G
Sbjct: 506 LELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAG 565
Query: 185 YAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVG 244
Y Q AL FR+M D I+ D SAC L + G+Q HA CV
Sbjct: 566 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHA-----QACVS 620
Query: 245 ---SNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQL 301
S++ + A++ +Y++C GKIE +
Sbjct: 621 GFSSDLPFQNALVTLYSRC--------------------------------GKIEESYLA 648
Query: 302 FDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGAL 361
F+Q + D ++W A++SG+ Q G +AL +F +M GI + T + ++A +
Sbjct: 649 FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANM 708
Query: 362 DFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSII 421
GK++H I + + A+I MYAKCGSI A F ++ + K +N+II
Sbjct: 709 KQGKQVHA-VITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEV--STKNEVSWNAII 765
Query: 422 SGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESM-LNYGI 480
+ ++HG G ++ F +M ++P+ VT V VL ACSH GLV++G +FESM YG+
Sbjct: 766 NAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGL 825
Query: 481 KPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIAGQ 540
P+ EHY C+VD+L R G L A IQ MP ++++WR LL+AC +H+N +IGE A
Sbjct: 826 SPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAH 885
Query: 541 KLLDLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTLHRFL 600
LL+LEP+ A YVLLSN+ A + +W+ R+ M + G++K PG S+IE ++H F
Sbjct: 886 HLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFY 945
Query: 601 ASKKSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVVFDVDEEEKETVVSYHSEKLALAFG 660
++HP EI +D+T + GYV + ++ ++ E+K+ ++ HSEKLA++FG
Sbjct: 946 VGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFG 1005
Query: 661 LINSRSKETIRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKKGNCSCMDFW 719
L++ + I + KNLR+C DCH K +S++ REI+VRDA RFH F+ G CSC D+W
Sbjct: 1006 LLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 209 bits (531), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 140/519 (26%), Positives = 252/519 (48%), Gaps = 49/519 (9%)
Query: 13 ALLESCKSLKQAL----QIHGQIVHSGL-NHHISSSQLISFFALSGCKNGLFR-SRILFS 66
+LE+C+ A QIH +I++ GL + + + LI ++ +NG +R +F
Sbjct: 191 GVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYS----RNGFVDLARRVFD 246
Query: 67 QIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFK 126
+ + W ++ G S+++ EA+ L+ M GI+ P + F VL++C ++ S +
Sbjct: 247 GLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM-PTPYAFSSVLSACKKIESLE 305
Query: 127 SGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYA 186
G Q+H ++K G D ++ NAL+ Y G + +A +F RD V+YNTLING +
Sbjct: 306 IGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLS 365
Query: 187 QVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSN 246
Q A+ LF++M ++PD+ T ++ AC+ G+Q HA K LG SN
Sbjct: 366 QCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTK-LG-FASN 423
Query: 247 MLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMD 306
++ A++N+YAKC IE A F + +
Sbjct: 424 NKIEGALLNLYAKC--------------------------------ADIETALDYFLETE 451
Query: 307 QRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKR 366
++V W M+ Y + + +F +M+ I P++ T ++L+ C+ LG L+ G++
Sbjct: 452 VENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQ 511
Query: 367 LHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQ 426
+H Q I+ F N ++ + +IDMYAK G +DTA + + K V + ++I+G Q
Sbjct: 512 IHSQIIK-TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG--KDVVSWTTMIAGYTQ 568
Query: 427 HGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLNYGIKPQMEH 486
+ + ++ FR+M G++ D V + AC+ ++EG+Q G +
Sbjct: 569 YNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPF 628
Query: 487 YGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAA 525
+V L +R G+++E+Y L +++ W AL++
Sbjct: 629 QNALVTLYSRCGKIEESY-LAFEQTEAGDNIAWNALVSG 666
Score = 143 bits (361), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 220/467 (47%), Gaps = 55/467 (11%)
Query: 84 SRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLS-SFKSGCQIHCHIIKFGLEF 142
S +S QE + S+ ++GI PN+ T ++L C + + S G ++H I+K GL+
Sbjct: 62 SEDESFQEKRI--DSVENRGI-RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDS 118
Query: 143 DLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVKEPCPALWLFRKMQ 202
+ + L FY G + A KVF+ R + ++N +I A LF +M
Sbjct: 119 NGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMV 178
Query: 203 DSCIQPDAFTFVAMFSACTELNDP-RIGKQFHA-VVYKNLGCVGSNMLLKTAVINMYAKC 260
+ P+ TF + AC + + +Q HA ++Y+ L + ++ +I++Y++
Sbjct: 179 SENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL---RDSTVVCNPLIDLYSRN 235
Query: 261 GLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGY 320
G +++A RVF + + K ++W +MISG ++ + E
Sbjct: 236 GFVDLARRVFDGLRL-KDHSSWVAMISGLSK-NECE------------------------ 269
Query: 321 SQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRN 380
++A+ LF M LGI P +VL AC + +L+ G++LH ++ + F +
Sbjct: 270 ------AEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK-LGFSSD 322
Query: 381 IFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFREM 440
++ A++ +Y G++ +A +F + + + +N++I+GL+Q G GE ++ +F+ M
Sbjct: 323 TYVCNALVSLYFHLGNLISAEHIFSNMSQ--RDAVTYNTLINGLSQCGYGEKAMELFKRM 380
Query: 441 ELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLNYGIKPQMEHYGCMVDLLARDGRL 500
L GL+PD T +++ ACS G + G+Q G + G +++L A+ +
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADI 440
Query: 501 DEAYGLIQSMPYDANSVIWRALLAAC----------RLHRNAKIGEI 537
+ A + N V+W +L A R+ R +I EI
Sbjct: 441 ETALDYFLETEVE-NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEI 486
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 130/281 (46%), Gaps = 11/281 (3%)
Query: 273 MGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALEL 332
+G+ + + Y +G + A ++FD+M +R + +W MI + + L
Sbjct: 114 LGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGL 173
Query: 333 FGKMESLGIHPDEVTMVAVLRACVGLG-ALDFGKRLHQQYIENVVFGRNIFLTTAVIDMY 391
F +M S + P+E T VL AC G A D +++H + + + + + +ID+Y
Sbjct: 174 FVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTV-VCNPLIDLY 232
Query: 392 AKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFREMELMGLKPDGVT 451
++ G +D A VF + LK S + ++ISGL+++ +I +F +M ++G+ P
Sbjct: 233 SRNGFVDLARRVFDGL--RLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYA 290
Query: 452 FVTVLCACSHGGLVEEGKQFFESMLNYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMP 511
F +VL AC +E G+Q +L G +V L G L A + +M
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 512 YDANSVIWRAL---LAACRLHRNAKIGEIAGQKLLD-LEPD 548
++V + L L+ C A E+ + LD LEPD
Sbjct: 351 -QRDAVTYNTLINGLSQCGYGEKAM--ELFKRMHLDGLEPD 388
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 419 bits (1078), Expect = e-116, Method: Compositional matrix adjust.
Identities = 236/640 (36%), Positives = 358/640 (55%), Gaps = 42/640 (6%)
Query: 115 VLNSCARLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHF--YSIFGYINNAHKVFEGSLA 172
+LNSC L + QIH IK+G++ D + LI SI + A ++
Sbjct: 11 LLNSCKNLRALT---QIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPE 67
Query: 173 RDLVSYNTLINGYAQVKEPCPALWLFRKM-QDSCIQPDAFTFVAMFSACTELNDPRIGKQ 231
D +NTL+ GY++ EP ++ +F +M + + PD+F+F + A R G Q
Sbjct: 68 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 232 FHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMG----------------- 274
H K+ + S++ + T +I MY CG + A +VF M
Sbjct: 128 MHCQALKH--GLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRG 185
Query: 275 -------------MSKSTAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYS 321
+ ++ +W+ M++GY + G++E A+++F +M RD VSW+ MI G +
Sbjct: 186 NDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIA 245
Query: 322 QVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRNI 381
G F+++ F +++ G+ P+EV++ VL AC G+ +FGK LH ++E + +
Sbjct: 246 HNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHG-FVEKAGYSWIV 304
Query: 382 FLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFREME 441
+ A+IDMY++CG++ A VF + + VS + S+I+GLA HG GE ++ +F EM
Sbjct: 305 SVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVS-WTSMIAGLAMHGQGEEAVRLFNEMT 363
Query: 442 LMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLN-YGIKPQMEHYGCMVDLLARDGRL 500
G+ PDG++F+++L ACSH GL+EEG+ +F M Y I+P++EHYGCMVDL R G+L
Sbjct: 364 AYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKL 423
Query: 501 DEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIAGQKLLDLEPDHGAHYVLLSNML 560
+AY I MP +++WR LL AC H N ++ E Q+L +L+P++ VLLSN
Sbjct: 424 QKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAY 483
Query: 561 AETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTLHRFLASKKSHPQTKEIELMLKDMT 620
A +W++ +RK M I+K WS +E T+++F A +K E LK++
Sbjct: 484 ATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEII 543
Query: 621 MKLKS-AGYVPNTVQVVFDVDEEEKETVVSYHSEKLALAFGLINSRSKETIRITKNLRIC 679
++LK AGY P ++DV+EEEKE VS HSEKLALAF L IRI KNLRIC
Sbjct: 544 LRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRIC 603
Query: 680 GDCHLAFKLLSEIYRREIMVRDAIRFHLFKKGNCSCMDFW 719
DCH KL S++Y EI+VRD RFH FK G+CSC D+W
Sbjct: 604 RDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 119/482 (24%), Positives = 206/482 (42%), Gaps = 102/482 (21%)
Query: 12 LALLESCKSLKQALQIHGQIVHSGLN-HHISSSQLISFFALSGCKNGLFRSRILFSQIDN 70
L+LL SCK+L+ QIHG + G++ + +LI A+S + L +R L
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAIS-ISDALPYARRLLLCFPE 67
Query: 71 PNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGCQ 130
P+ F++NTL+RGYS SD P ++ ++ M+ KG V P++F+F FV+ + S ++G Q
Sbjct: 68 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 131 IHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKV------------------------ 166
+HC +K GLE LF+ LI Y G + A KV
Sbjct: 128 MHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGND 187
Query: 167 -------FEGSLARDLVSYNTLINGYAQVKEPCPALWLF--------------------- 198
F+ L R+ S+N ++ GY + E A +F
Sbjct: 188 VAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHN 247
Query: 199 ----------RKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNML 248
R++Q + + P+ + + SAC++ GK H V K G + +
Sbjct: 248 GSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEK----AGYSWI 303
Query: 249 --LKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMD 306
+ A+I+MY++CG + MA VF M + +W+SMI+G G+ E A +LF++M
Sbjct: 304 VSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMT 363
Query: 307 QRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKR 366
+ G+ PD ++ +++L AC G ++ G+
Sbjct: 364 -------------------------------AYGVTPDGISFISLLHACSHAGLIEEGED 392
Query: 367 LHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQ 426
+ I ++D+Y + G + A ++P T ++ +++ +
Sbjct: 393 YFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIP-PTAIVWRTLLGACSS 451
Query: 427 HG 428
HG
Sbjct: 452 HG 453
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 126/250 (50%), Gaps = 3/250 (1%)
Query: 61 SRILFSQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCA 120
++ +FS++ + + W+T++ G + + S E+ LY L + +SPN + VL++C+
Sbjct: 222 AKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESF-LYFRELQRAGMSPNEVSLTGVLSACS 280
Query: 121 RLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEG-SLARDLVSYN 179
+ SF+ G +H + K G + + + NALI YS G + A VFEG R +VS+
Sbjct: 281 QSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWT 340
Query: 180 TLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKN 239
++I G A + A+ LF +M + PD +F+++ AC+ G+ + + + K
Sbjct: 341 SMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEM-KR 399
Query: 240 LGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERAR 299
+ + + ++++Y + G + A M + + W +++ + G IE A
Sbjct: 400 VYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAE 459
Query: 300 QLFDQMDQRD 309
Q+ ++++ D
Sbjct: 460 QVKQRLNELD 469
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 418 bits (1074), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/621 (37%), Positives = 351/621 (56%), Gaps = 44/621 (7%)
Query: 106 SPNNFTFPFVLNSCARLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHK 165
SP+ T+ ++ C SS ++H HI+ G + D F+ LI YS G ++ A K
Sbjct: 74 SPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARK 133
Query: 166 VFEGSLARDLVSYNTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACT---- 221
VF+ + R + +N L L L+ KM ++ D FT+ + AC
Sbjct: 134 VFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASEC 193
Query: 222 ELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAA 281
+N GK+ HA + + S++ + T +++MYA
Sbjct: 194 TVNHLMKGKEIHAHLTRR--GYSSHVYIMTTLVDMYA----------------------- 228
Query: 282 WSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKM--ESL 339
R G ++ A +F M R++VSW+AMI+ Y++ G +AL F +M E+
Sbjct: 229 ---------RFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETK 279
Query: 340 GIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDT 399
P+ VTMV+VL+AC L AL+ GK +H YI + + +A++ MY +CG ++
Sbjct: 280 DSSPNSVTMVSVLQACASLAALEQGKLIHG-YILRRGLDSILPVISALVTMYGRCGKLEV 338
Query: 400 ALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCAC 459
VF ++ + + V +NS+IS HG G+ +I +F EM G P VTFV+VL AC
Sbjct: 339 GQRVFDRM--HDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGAC 396
Query: 460 SHGGLVEEGKQFFESML-NYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVI 518
SH GLVEEGK+ FE+M ++GIKPQ+EHY CMVDLL R RLDEA ++Q M + +
Sbjct: 397 SHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV 456
Query: 519 WRALLAACRLHRNAKIGEIAGQKLLDLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDD 578
W +LL +CR+H N ++ E A ++L LEP + +YVLL+++ AE W+E ++V+KL++
Sbjct: 457 WGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEH 516
Query: 579 SGIQKPPGWSYIEHNGTLHRFLASKKSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVVFD 638
G+QK PG ++E ++ F++ + +P ++I L + +K GY+P T V+++
Sbjct: 517 RGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYE 576
Query: 639 VDEEEKETVVSYHSEKLALAFGLINSRSKETIRITKNLRICGDCHLAFKLLSEIYRREIM 698
++ EEKE +V HSEKLALAFGLIN+ E IRITKNLR+C DCHL K +S+ +EI+
Sbjct: 577 LETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEIL 636
Query: 699 VRDAIRFHLFKKGNCSCMDFW 719
VRD RFH FK G CSC D+W
Sbjct: 637 VRDVNRFHRFKNGVCSCGDYW 657
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 137/288 (47%), Gaps = 10/288 (3%)
Query: 21 LKQALQIHGQIVHSGLNHHIS-SSQLISFFALSGCKNGLFRSRILFSQIDNPNIFIWNTL 79
L + +IH + G + H+ + L+ +A GC + + +F + N+ W+ +
Sbjct: 198 LMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVD---YASYVFGGMPVRNVVSWSAM 254
Query: 80 MRGYSRSDSPQEALVLYTSMLSKGI-VSPNNFTFPFVLNSCARLSSFKSGCQIHCHIIKF 138
+ Y+++ EAL + M+ + SPN+ T VL +CA L++ + G IH +I++
Sbjct: 255 IACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR 314
Query: 139 GLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVKEPCPALWLF 198
GL+ L + +AL+ Y G + +VF+ RD+VS+N+LI+ Y A+ +F
Sbjct: 315 GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIF 374
Query: 199 RKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYA 258
+M + P TFV++ AC+ GK+ ++++ G + + ++++
Sbjct: 375 EEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHG-IKPQIEHYACMVDLLG 433
Query: 259 KCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERA----RQLF 302
+ ++ A ++ M W S++ G +E A R+LF
Sbjct: 434 RANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLF 481
Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 12/218 (5%)
Query: 311 VSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQ 370
+S +I + G QA+ + + S P + T ++ C +L R+H+
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESS----PSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 371 YIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGLG 430
++N ++ FL T +I MY+ GS+D A VF K K +T+ ++N++ L G G
Sbjct: 103 ILDNGS-DQDPFLATKLIGMYSDLGSVDYARKVFDKTRK--RTIYVWNALFRALTLAGHG 159
Query: 431 ETSIAVFREMELMGLKPDGVTFVTVLCACSHG----GLVEEGKQFFESMLNYGIKPQMEH 486
E + ++ +M +G++ D T+ VL AC + +GK+ + G +
Sbjct: 160 EEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYI 219
Query: 487 YGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLA 524
+VD+ AR G +D A + MP N V W A++A
Sbjct: 220 MTTLVDMYARFGCVDYASYVFGGMPV-RNVVSWSAMIA 256
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 92/192 (47%), Gaps = 26/192 (13%)
Query: 10 SLLALLESCKSL---KQALQIHGQIVHSGLNHHISS-SQLISFFALSGCKNGLFRSRILF 65
+++++L++C SL +Q IHG I+ GL+ + S L++ + G L + +F
Sbjct: 287 TMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCG---KLEVGQRVF 343
Query: 66 SQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSF 125
++ + ++ WN+L+ Y ++A+ ++ ML+ G SP TF VL +C+
Sbjct: 344 DRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANG-ASPTPVTFVSVLGACSHEGLV 402
Query: 126 KSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGS-LARDLVSYNTLING 184
+ G ++ + + D I+ + H+ + + A+++ E + + +D+ +
Sbjct: 403 EEGKRLFETMWR-----DHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRT------- 450
Query: 185 YAQVKEPCPALW 196
EP P +W
Sbjct: 451 -----EPGPKVW 457
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/638 (35%), Positives = 368/638 (57%), Gaps = 46/638 (7%)
Query: 83 YSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGCQIHCHIIKFGLEF 142
Y R D P+ A+ S+ S G+ + ++ T+ ++ C + G I H+ G
Sbjct: 38 YQR-DLPR-AMKAMDSLQSHGLWA-DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRP 94
Query: 143 DLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVKEPCPALWLFRKMQ 202
+F+ N LI+ Y F +N+AH++F+ R+++S+ T+I+ Y++ K AL L M
Sbjct: 95 MMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLML 154
Query: 203 DSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGL 262
++P+ +T+ ++ +C ++D R+ H + K + S++ +++A+I+++AK G
Sbjct: 155 RDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKE--GLESDVFVRSALIDVFAKLG- 208
Query: 263 MNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQ 322
+ E A +FD+M D + W ++I G++Q
Sbjct: 209 -------------------------------EPEDALSVFDEMVTGDAIVWNSIIGGFAQ 237
Query: 323 VGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRNIF 382
ALELF +M+ G ++ T+ +VLRAC GL L+ G + H + V + +++
Sbjct: 238 NSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAH---VHIVKYDQDLI 294
Query: 383 LTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFREMEL 442
L A++DMY KCGS++ AL VF ++ + + V ++++ISGLAQ+G + ++ +F M+
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMKE--RDVITWSTMISGLAQNGYSQEALKLFERMKS 352
Query: 443 MGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLN-YGIKPQMEHYGCMVDLLARDGRLD 501
G KP+ +T V VL ACSH GL+E+G +F SM YGI P EHYGCM+DLL + G+LD
Sbjct: 353 SGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLD 412
Query: 502 EAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIAGQKLLDLEPDHGAHYVLLSNMLA 561
+A L+ M + ++V WR LL ACR+ RN + E A +K++ L+P+ Y LLSN+ A
Sbjct: 413 DAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYA 472
Query: 562 ETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTLHRFLASKKSHPQTKEIELMLKDMTM 621
+ +W+ ++R M D GI+K PG S+IE N +H F+ SHPQ E+ L +
Sbjct: 473 NSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIH 532
Query: 622 KLKSAGYVPNTVQVVFDVDEEEKETVVSYHSEKLALAFGLINSRSKETIRITKNLRICGD 681
+L GYVP T V+ D++ E+ E + +HSEKLALAFGL+ ++ IRI KNLRICGD
Sbjct: 533 RLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGD 592
Query: 682 CHLAFKLLSEIYRREIMVRDAIRFHLFKKGNCSCMDFW 719
CH+ KL S++ R I++RD IR+H F+ G CSC D+W
Sbjct: 593 CHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 156 bits (394), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 123/400 (30%), Positives = 187/400 (46%), Gaps = 84/400 (21%)
Query: 64 LFSQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLS 123
LF Q+ N+ W T++ YS+ Q+AL L ML V PN +T+ VL SC +S
Sbjct: 118 LFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN-VRPNVYTYSSVLRSCNGMS 176
Query: 124 SFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLIN 183
+ +HC IIK GLE D+F+R+ALI ++ G +A VF+ + D + +N++I
Sbjct: 177 DVR---MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIG 233
Query: 184 GYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCV 243
G+AQ AL LF++M+ + + T ++ ACT L +G Q H + K
Sbjct: 234 GFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK----Y 289
Query: 244 GSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFD 303
+++L A+++MY KCG + A RVF+ M + WS+MISG +
Sbjct: 290 DQDLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMISGLAQ------------ 336
Query: 304 QMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDF 363
+GYSQ +AL+LF +M+S G P+ +T+V VL AC G L+
Sbjct: 337 --------------NGYSQ-----EALKLFERMKSSGTKPNYITIVGVLFACSHAGLLED 377
Query: 364 G----KRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNS 419
G + + + Y + V R + +ID+ K G +D A V L N
Sbjct: 378 GWYYFRSMKKLYGIDPV--REHY--GCMIDLLGKAGKLDDA-------------VKLLN- 419
Query: 420 IISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCAC 459
EME +PD VT+ T+L AC
Sbjct: 420 -------------------EME---CEPDAVTWRTLLGAC 437
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust.
Identities = 237/718 (33%), Positives = 404/718 (56%), Gaps = 47/718 (6%)
Query: 9 SSLLALLESC---KSLKQALQIHGQIVHSGLNHH-ISSSQLISFFALSGCKNGLFRSRIL 64
++L+ +L C + + +HG V L+ + ++ L+ ++ GC + ++++
Sbjct: 293 ATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGC---ITNAQMI 349
Query: 65 FSQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKG-IVSPNNFTFPFVLNSCARLS 123
F +N N+ WNT++ G+S + ML+ G V + T + C S
Sbjct: 350 FKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHES 409
Query: 124 SFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLIN 183
S ++HC+ +K ++ + NA + Y+ G ++ A +VF G ++ + S+N LI
Sbjct: 410 FLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIG 469
Query: 184 GYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCV 243
G+AQ +P +L +M+ S + PD+FT ++ SAC++L R+GK+ H + +N +
Sbjct: 470 GHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW--L 527
Query: 244 GSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFD 303
++ + +V+++Y CG ++ + LFD
Sbjct: 528 ERDLFVYLSVLSLYIHCG--------------------------------ELCTVQALFD 555
Query: 304 QMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDF 363
M+ + LVSW +I+GY Q G +AL +F +M GI ++M+ V AC L +L
Sbjct: 556 AMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRL 615
Query: 364 GKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISG 423
G+ H +++++ + F+ ++IDMYAK GSI + VF + + K+ + +N++I G
Sbjct: 616 GREAHAYALKHLL-EDDAFIACSLIDMYAKNGSITQSSKVFNGLKE--KSTASWNAMIMG 672
Query: 424 LAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLN-YGIKP 482
HGL + +I +F EM+ G PD +TF+ VL AC+H GL+ EG ++ + M + +G+KP
Sbjct: 673 YGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKP 732
Query: 483 QMEHYGCMVDLLARDGRLDEAYGLI-QSMPYDANSVIWRALLAACRLHRNAKIGEIAGQK 541
++HY C++D+L R G+LD+A ++ + M +A+ IW++LL++CR+H+N ++GE K
Sbjct: 733 NLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAK 792
Query: 542 LLDLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTLHRFLA 601
L +LEP+ +YVLLSN+ A +WE+ R+VR+ M++ ++K G S+IE N + F+
Sbjct: 793 LFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVV 852
Query: 602 SKKSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVVFDVDEEEKETVVSYHSEKLALAFGL 661
++ +EI+ + + MK+ GY P+T+ V D+ EEEK + HSEKLAL +GL
Sbjct: 853 GERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGL 912
Query: 662 INSRSKETIRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKKGNCSCMDFW 719
I + TIR+ KNLRIC DCH A KL+S++ REI+VRD RFH FK G CSC D+W
Sbjct: 913 IKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 142/595 (23%), Positives = 277/595 (46%), Gaps = 92/595 (15%)
Query: 19 KSLKQALQIHGQIVHSGL---NHHISSSQLISFFALSGCKNGLFRSRILFSQIDNPNIFI 75
K ++ +IH Q+V N + +++I+ +A+ G + SR +F + + N+F
Sbjct: 98 KDIEMGRKIH-QLVSGSTRLRNDDVLCTRIITMYAMCGSPDD---SRFVFDALRSKNLFQ 153
Query: 76 WNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGCQIHCHI 135
WN ++ YSR++ E L + M+S + P++FT+P V+ +CA +S G +H +
Sbjct: 154 WNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLV 213
Query: 136 IKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVKEPCPAL 195
+K GL D+F+ NAL+ FY G++ +A ++F+ R+LVS+N++I ++ +
Sbjct: 214 VKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESF 273
Query: 196 WLFRKMQ----DSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKT 251
L +M D PD T V + C + +GK H K + ++L
Sbjct: 274 LLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLR--LDKELVLNN 331
Query: 252 AVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQM------ 305
A+++MY+KCG + A+ +F M +K+ +W++M+ G++ EG + QM
Sbjct: 332 ALMDMYSKCGCITNAQMIFK-MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGED 390
Query: 306 ---DQ---------------------------------RDLVSWTAMISGYSQVGGFSQA 329
D+ +LV+ A ++ Y++ G S A
Sbjct: 391 VKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVA-NAFVASYAKCGSLSYA 449
Query: 330 LELFGKMES---------LGIH----------------------PDEVTMVAVLRACVGL 358
+F + S +G H PD T+ ++L AC L
Sbjct: 450 QRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL 509
Query: 359 GALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFN 418
+L GK +H I N + R++F+ +V+ +Y CG + T ++F + K++ +N
Sbjct: 510 KSLRLGKEVHGFIIRNWL-ERDLFVYLSVLSLYIHCGELCTVQALFDAMED--KSLVSWN 566
Query: 419 SIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLNY 478
++I+G Q+G + ++ VFR+M L G++ G++ + V ACS + G++ L +
Sbjct: 567 TVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKH 626
Query: 479 GIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAK 533
++ ++D+ A++G + ++ + + + ++ W A++ +H AK
Sbjct: 627 LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKSTASWNAMIMGYGIHGLAK 680
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 224/456 (49%), Gaps = 55/456 (12%)
Query: 8 HSSLLALLES--CKSLKQALQIHGQIVHSGLNHHISSSQLISFFALSGCKNGLFRSRILF 65
H S L L+ C SLKQ ++ ++V ++ ++ +A G L ++ +F
Sbjct: 407 HESFLPSLKELHCYSLKQEF-VYNELV---------ANAFVASYAKCG---SLSYAQRVF 453
Query: 66 SQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSF 125
I + + WN L+ G+++S+ P+ +L + M G++ P++FT +L++C++L S
Sbjct: 454 HGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLL-PDSFTVCSLLSACSKLKSL 512
Query: 126 KSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGY 185
+ G ++H II+ LE DLF+ +++ Y G + +F+ + LVS+NT+I GY
Sbjct: 513 RLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGY 572
Query: 186 AQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGS 245
Q P AL +FR+M IQ + + +F AC+ L R+G++ HA K+L +
Sbjct: 573 LQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHL--LED 630
Query: 246 NMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQM 305
+ + ++I+MYAK G + + +VF+ + KSTA+W++MI GY
Sbjct: 631 DAFIACSLIDMYAKNGSITQSSKVFNGL-KEKSTASWNAMIMGYG--------------- 674
Query: 306 DQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGK 365
I G ++ +A++LF +M+ G +PD++T + VL AC G + G
Sbjct: 675 -----------IHGLAK-----EAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGL 718
Query: 366 RLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLA 425
R Q + N+ VIDM + G +D AL V + V ++ S++S
Sbjct: 719 RYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCR 778
Query: 426 QHG---LGETSIAVFREMELMGLKPDGVTFVTVLCA 458
H +GE A E+E KP+ ++ L A
Sbjct: 779 IHQNLEMGEKVAAKLFELE--PEKPENYVLLSNLYA 812
>sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920
OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1
Length = 606
Score = 414 bits (1064), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/562 (38%), Positives = 332/562 (59%), Gaps = 39/562 (6%)
Query: 160 INNAHKVFEGSLARDLVSYNTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSA 219
+N A +F G +NT+I GY V AL + +M +PD FT+ + A
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 141
Query: 220 CTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKST 279
CT L R GKQ H V+K LG + +++ ++ ++INMY +C
Sbjct: 142 CTRLKSIREGKQIHGQVFK-LG-LEADVFVQNSLINMYGRC------------------- 180
Query: 280 AAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELF-GKMES 338
G++E + +F++++ + SW++M+S + +G +S+ L LF G
Sbjct: 181 -------------GEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSE 227
Query: 339 LGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSID 398
+ +E MV+ L AC GAL+ G +H + N+ NI + T+++DMY KCG +D
Sbjct: 228 TNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNIS-ELNIIVQTSLVDMYVKCGCLD 286
Query: 399 TALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCA 458
AL +F K+ K + ++++ISGLA HG GE+++ +F +M GL+PD V +V+VL A
Sbjct: 287 KALHIFQKMEK--RNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNA 344
Query: 459 CSHGGLVEEGKQFFESMLNYG-IKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSV 517
CSH GLV+EG++ F ML G ++P EHYGC+VDLL R G L+EA IQS+P + N V
Sbjct: 345 CSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDV 404
Query: 518 IWRALLAACRLHRNAKIGEIAGQKLLDLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMD 577
IWR L+ CR+ +N ++G+IA Q+LL L + Y+L+SN+ ++ W++ + R +
Sbjct: 405 IWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIA 464
Query: 578 DSGIQKPPGWSYIEHNGTLHRFLASKKSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVVF 637
G+++ PG+S +E G HRF++ +SHP+ KEI ML M +LK GY P+ Q++
Sbjct: 465 IKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILL 524
Query: 638 DVDEEEKETVVSYHSEKLALAFGLINSRSKETIRITKNLRICGDCHLAFKLLSEIYRREI 697
+VDEEEK+ + HS+K+A+AFGL+ + I+I +NLR+C DCH K +S IY REI
Sbjct: 525 NVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREI 584
Query: 698 MVRDAIRFHLFKKGNCSCMDFW 719
+VRD RFHLFK G CSC D+W
Sbjct: 585 VVRDRNRFHLFKGGTCSCKDYW 606
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 197/400 (49%), Gaps = 38/400 (9%)
Query: 12 LALLESCKSLKQALQIHGQIVHSGLNHHISSSQ--LISFFALSGCKNGLFRSRILFSQID 69
L LL+ C ++ + Q+H + + L + S S +++ A SG +N + + +F ID
Sbjct: 34 LYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGID 93
Query: 70 NPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGC 129
+P F +NT++RGY S +EAL Y M+ +G P+NFT+P +L +C RL S + G
Sbjct: 94 DPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRG-NEPDNFTYPCLLKACTRLKSIREGK 152
Query: 130 QIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVK 189
QIH + K GLE D+F++N+LI+ Y G + + VFE ++ S++++++ A +
Sbjct: 153 QIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMG 212
Query: 190 EPCPALWLFRKM-QDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNML 248
L LFR M ++ ++ + V+ AC +G H + +N+ + N++
Sbjct: 213 MWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISEL--NII 270
Query: 249 LKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQR 308
++T++++MY KCG ++ A +F M ++ +S+MISG G+ E
Sbjct: 271 VQTSLVDMYVKCGCLDKALHIFQKME-KRNNLTYSAMISGLALHGEGE------------ 317
Query: 309 DLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRLH 368
AL +F KM G+ PD V V+VL AC G + G+R+
Sbjct: 318 -------------------SALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVF 358
Query: 369 QQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIP 408
+ ++ ++D+ + G ++ AL IP
Sbjct: 359 AEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIP 398
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 146/308 (47%), Gaps = 12/308 (3%)
Query: 292 EGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAV 351
E + A +F +D + MI GY V F +AL + +M G PD T +
Sbjct: 79 ENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCL 138
Query: 352 LRACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNL 411
L+AC L ++ GK++H Q + + ++F+ ++I+MY +CG ++ + +VF K+
Sbjct: 139 LKACTRLKSIREGKQIHGQVFK-LGLEADVFVQNSLINMYGRCGEMELSSAVFEKLES-- 195
Query: 412 KTVSLFNSIISGLAQHGLGETSIAVFREM-ELMGLKPDGVTFVTVLCACSHGGLVEEGKQ 470
KT + ++S++S A G+ + +FR M LK + V+ L AC++ G + G
Sbjct: 196 KTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMS 255
Query: 471 FFESMLNYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHR 530
+L + + +VD+ + G LD+A + Q M N++ + A+++ LH
Sbjct: 256 IHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKME-KRNNLTYSAMISGLALHG 314
Query: 531 NAKIGEIAGQKLLD--LEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWS 588
+ K++ LEPDH YV + N + + +E R+V M G +P
Sbjct: 315 EGESALRMFSKMIKEGLEPDHVV-YVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTA-- 371
Query: 589 YIEHNGTL 596
EH G L
Sbjct: 372 --EHYGCL 377
Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 153/350 (43%), Gaps = 33/350 (9%)
Query: 14 LLESC---KSLKQALQIHGQIVHSGLNHHI-SSSQLISFFALSGCKNGLFRSRILFSQID 69
LL++C KS+++ QIHGQ+ GL + + LI+ + G + S +F +++
Sbjct: 138 LLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCG---EMELSSAVFEKLE 194
Query: 70 NPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGC 129
+ W++++ + E L+L+ M S+ + L +CA + G
Sbjct: 195 SKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGM 254
Query: 130 QIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVK 189
IH +++ E ++ ++ +L+ Y G ++ A +F+ R+ ++Y+ +I+G A
Sbjct: 255 SIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHG 314
Query: 190 EPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLL 249
E AL +F KM ++PD +V++ +AC+ + G++ A + K G V
Sbjct: 315 EGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKE-GKVEPTAEH 373
Query: 250 KTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERAR---------- 299
++++ + GL+ A ++ + K+ W + +S IE +
Sbjct: 374 YGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLS 433
Query: 300 -----------QLFDQMDQRDLVSWTAM---ISGYSQVGGFSQALELFGK 335
L+ Q D V+ T I G Q GFS +EL GK
Sbjct: 434 SHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFS-IVELKGK 482
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 414 bits (1063), Expect = e-114, Method: Compositional matrix adjust.
Identities = 235/686 (34%), Positives = 367/686 (53%), Gaps = 68/686 (9%)
Query: 65 FSQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSS 124
F ++ + + WN L+ GYS S A+ Y +M+ + T +L +
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGH 154
Query: 125 FKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTL--- 181
G QIH +IK G E L + + L++ Y+ G I++A KVF G R+ V YN+L
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 182 ---------------------------INGYAQVKEPCPALWLFRKMQDSCIQPDAFTFV 214
I G AQ A+ FR+M+ ++ D + F
Sbjct: 215 LLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFG 274
Query: 215 AMFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMG 274
++ AC L GKQ HA + + ++ + +A+I+MY KC ++ A+ VF
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIRT--NFQDHIYVGSALIDMYCKCKCLHYAKTVF---- 328
Query: 275 MSKSTAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFG 334
D+M Q+++VSWTAM+ GY Q G +A+++F
Sbjct: 329 ----------------------------DRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFL 360
Query: 335 KMESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKC 394
M+ GI PD T+ + AC + +L+ G + H + I + + + ++ +++ +Y KC
Sbjct: 361 DMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLI-HYVTVSNSLVTLYGKC 419
Query: 395 GSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVT 454
G ID + +F ++ N++ + +++S AQ G +I +F +M GLKPDGVT
Sbjct: 420 GDIDDSTRLFNEM--NVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTG 477
Query: 455 VLCACSHGGLVEEGKQFFESMLN-YGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYD 513
V+ ACS GLVE+G+++F+ M + YGI P + HY CM+DL +R GRL+EA I MP+
Sbjct: 478 VISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFP 537
Query: 514 ANSVIWRALLAACRLHRNAKIGEIAGQKLLDLEPDHGAHYVLLSNMLAETYRWEEARQVR 573
+++ W LL+ACR N +IG+ A + L++L+P H A Y LLS++ A +W+ Q+R
Sbjct: 538 PDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLR 597
Query: 574 KLMDDSGIQKPPGWSYIEHNGTLHRFLASKKSHPQTKEIELMLKDMTMKLKSAGYVPNTV 633
+ M + ++K PG S+I+ G LH F A +S P +I L+++ K+ GY P+T
Sbjct: 598 RGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTS 657
Query: 634 QVVFDVDEEEKETVVSYHSEKLALAFGLINSRSKETIRITKNLRICGDCHLAFKLLSEIY 693
V DV+E K +++YHSE+LA+AFGLI S + IR+ KNLR+C DCH A K +S +
Sbjct: 658 FVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVT 717
Query: 694 RREIMVRDAIRFHLFKKGNCSCMDFW 719
REI+VRDA+RFH FK G CSC DFW
Sbjct: 718 GREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 129/435 (29%), Positives = 219/435 (50%), Gaps = 17/435 (3%)
Query: 96 YTSMLSKGIVS----PNNFTFPFVLNSCARLSSFKSGCQIHCHIIKFGLEFDLFIRNALI 151
Y M+ I+ P F + ++++ A + S ++ I + +LF N L+
Sbjct: 24 YVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIP----QPNLFSWNNLL 79
Query: 152 HFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVKEPCPALWLFRK-MQDSCIQPDA 210
YS G I+ FE RD V++N LI GY+ A+ + M+D
Sbjct: 80 LAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTR 139
Query: 211 FTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVF 270
T + M + +GKQ H V K LG S +L+ + ++ MYA G ++ A++VF
Sbjct: 140 VTLMTMLKLSSSNGHVSLGKQIHGQVIK-LG-FESYLLVGSPLLYMYANVGCISDAKKVF 197
Query: 271 STMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQAL 330
+ ++T ++S++ G G IE A QLF M ++D VSW AMI G +Q G +A+
Sbjct: 198 YGLD-DRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAI 255
Query: 331 ELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDM 390
E F +M+ G+ D+ +VL AC GLGA++ GK++H I F +I++ +A+IDM
Sbjct: 256 ECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIR-TNFQDHIYVGSALIDM 314
Query: 391 YAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFREMELMGLKPDGV 450
Y KC + A +VF ++ + K V + +++ G Q G E ++ +F +M+ G+ PD
Sbjct: 315 YCKCKCLHYAKTVFDRMKQ--KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHY 372
Query: 451 TFVTVLCACSHGGLVEEGKQFFESMLNYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSM 510
T + AC++ +EEG QF + G+ + +V L + G +D++ L M
Sbjct: 373 TLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM 432
Query: 511 PYDANSVIWRALLAA 525
++V W A+++A
Sbjct: 433 NV-RDAVSWTAMVSA 446
Score = 140 bits (353), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 121/532 (22%), Positives = 220/532 (41%), Gaps = 106/532 (19%)
Query: 10 SLLALLESCKSLKQALQIHGQIVHSGLNHHI-SSSQLISFFALSGCKNGLFRSRILFSQI 68
++L L S + QIHGQ++ G ++ S L+ +A GC + ++ +F +
Sbjct: 144 TMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC---ISDAKKVFYGL 200
Query: 69 DNPNIFIWNTLMRGYSRSDSPQEALVLYTSM---------LSKGIVSP------------ 107
D+ N ++N+LM G ++AL L+ M + KG+
Sbjct: 201 DDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFRE 260
Query: 108 --------NNFTFPFVLNSCARLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGY 159
+ + F VL +C L + G QIH II+ + +++ +ALI Y
Sbjct: 261 MKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKC 320
Query: 160 INNAHKVFEGSLARDLVSYNTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSA 219
++ A VF+ +++VS+ ++ GY Q A+ +F MQ S I PD +T SA
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISA 380
Query: 220 CTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKST 279
C ++ G QFH + G + + + +++ +Y KCG ++ + R+F+ M + +
Sbjct: 381 CANVSSLEEGSQFHGKAITS-GLI-HYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV-RDA 437
Query: 280 AAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESL 339
+W++M+S Y + G+ QLFD+M Q
Sbjct: 438 VSWTAMVSAYAQFGRAVETIQLFDKMVQH------------------------------- 466
Query: 340 GIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDT 399
G+ PD VT+ V+ AC G ++ G+R + +I + +ID++++ G ++
Sbjct: 467 GLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEE 526
Query: 400 ALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCAC 459
A+ +P PD + + T+L AC
Sbjct: 527 AMRFINGMP------------------------------------FPPDAIGWTTLLSAC 550
Query: 460 SHGGLVEEGKQFFESMLNYGIKPQMEH-YGCMVDLLARDGRLDEAYGLIQSM 510
+ G +E GK ES++ + P Y + + A G+ D L + M
Sbjct: 551 RNKGNLEIGKWAAESLIE--LDPHHPAGYTLLSSIYASKGKWDSVAQLRRGM 600
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 154/362 (42%), Gaps = 46/362 (12%)
Query: 224 NDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWS 283
N R K H + + L L +++ YA A RVF + + +W+
Sbjct: 20 NQSRYVKMIHGNIIRALPY--PETFLYNNIVHAYALMKSSTYARRVFDRIP-QPNLFSWN 76
Query: 284 SMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGK-MESLGIH 342
+++ Y++ G I F+++ RD V+W +I GYS G A++ + M +
Sbjct: 77 NLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSAN 136
Query: 343 PDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALS 402
VT++ +L+ G + GK++H Q I+ + F + + + ++ MYA G I A
Sbjct: 137 LTRVTLMTMLKLSSSNGHVSLGKQIHGQVIK-LGFESYLLVGSPLLYMYANVGCISDAKK 195
Query: 403 VFYKIPKNLKTVSLFNSI------------------------------ISGLAQHGLGET 432
VFY + + ++NS+ I GLAQ+GL +
Sbjct: 196 VFYGLDD--RNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKE 253
Query: 433 SIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLNYGIKPQMEHYGCMVD 492
+I FREM++ GLK D F +VL AC G + EGKQ ++ + + ++D
Sbjct: 254 AIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALID 313
Query: 493 LLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIAGQKLLDL-----EP 547
+ + L A + M N V W A++ + E A + LD+ +P
Sbjct: 314 MYCKCKCLHYAKTVFDRMK-QKNVVSWTAMVVG---YGQTGRAEEAVKIFLDMQRSGIDP 369
Query: 548 DH 549
DH
Sbjct: 370 DH 371
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 409 bits (1052), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/609 (36%), Positives = 364/609 (59%), Gaps = 11/609 (1%)
Query: 116 LNSCARLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDL 175
L CAR + + +H HI+K G+ + N L++ Y G ++A +VF+ RD
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 176 VSYNTLINGYAQVKEPCPALWLFRKMQDSC-IQPDAFTFVAMFSACTELNDPRIGKQFHA 234
+++ +++ Q L +F + S ++PD F F A+ AC L G+Q H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 235 VVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGK 294
+ + ++ ++K+++++MYAKCGL+N A+ VF ++ + K+T +W++M+SGY + G+
Sbjct: 130 --HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRV-KNTISWTAMVSGYAKSGR 186
Query: 295 IERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHP-DEVTMVAVLR 353
E A +LF + ++L SWTA+ISG+ Q G +A +F +M + D + + +++
Sbjct: 187 KEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVG 246
Query: 354 ACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKT 413
AC L A G+++H I + F +F++ A+IDMYAKC + A +F ++ +
Sbjct: 247 ACANLAASIAGRQVHGLVIA-LGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRH--RD 303
Query: 414 VSLFNSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFE 473
V + S+I G+AQHG E ++A++ +M G+KP+ VTFV ++ ACSH G VE+G++ F+
Sbjct: 304 VVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQ 363
Query: 474 SML-NYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNA 532
SM +YGI+P ++HY C++DLL R G LDEA LI +MP+ + W ALL+AC+
Sbjct: 364 SMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRG 423
Query: 533 KIG-EIAGQKLLDLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIE 591
++G IA + + + Y+LLSN+ A W + + R+ + + ++K PG S +E
Sbjct: 424 QMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVE 483
Query: 592 HNGTLHRFLASKKSHPQTKEIELMLKDMTMKLK-SAGYVPNTVQVVFDVDEEEKETVVSY 650
F A + SHP ++I +LK + +++ GYVP+T ++ D+DE+EKE ++ +
Sbjct: 484 VRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFW 543
Query: 651 HSEKLALAFGLINSRSKETIRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKK 710
HSE+ A+A+GL+ + IRI KNLR+CGDCH+ K +SEI REI+VRDA R+H FK
Sbjct: 544 HSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKG 603
Query: 711 GNCSCMDFW 719
G CSC DFW
Sbjct: 604 GKCSCNDFW 612
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/458 (21%), Positives = 203/458 (44%), Gaps = 71/458 (15%)
Query: 12 LALLESCKSLKQALQIHGQIVHSGLNHHIS-SSQLISFFALSGCKNGLFRSRILFSQIDN 70
L L ++L A +H IV G+ ++ L++ + G + + +F ++ +
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQ---VFDEMPH 66
Query: 71 PNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGCQ 130
+ W +++ ++++ + L +++S+ S + P++F F ++ +CA L S G Q
Sbjct: 67 RDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQ 126
Query: 131 IHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVKE 190
+HCH I D ++++L+ Y+ G +N+A VF+ ++ +S+ +++GYA+
Sbjct: 127 VHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGR 186
Query: 191 PCPALWLFRKM--------------------------------QDSCIQPDAFTFVAMFS 218
AL LFR + ++ D ++
Sbjct: 187 KEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVG 246
Query: 219 ACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKS 278
AC L G+Q H +V LG S + + A+I+MYAKC + A+ +FS M +
Sbjct: 247 ACANLAASIAGRQVHGLVIA-LG-FDSCVFISNALIDMYAKCSDVIAAKDIFSRM-RHRD 303
Query: 279 TAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMES 338
+W+S+I G + G+ E+A L+D M S
Sbjct: 304 VVSWTSLIVGMAQHGQAEKALALYDD-------------------------------MVS 332
Query: 339 LGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSID 398
G+ P+EVT V ++ AC +G ++ G+ L Q ++ ++ T ++D+ + G +D
Sbjct: 333 HGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLD 392
Query: 399 TALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAV 436
A ++ + +P + + +++S + G G+ I +
Sbjct: 393 EAENLIHTMPFPPDEPT-WAALLSACKRQGRGQMGIRI 429
Score = 119 bits (299), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 159/336 (47%), Gaps = 14/336 (4%)
Query: 9 SSLLALLESCKSLKQALQIHGQIVHSGLNHHISSSQLISFFALSGCKNGLFRSRILFSQI 68
SSL+ + C L A + I + + IS + ++S +A SG K LF +
Sbjct: 144 SSLVDMYAKCGLLNSAKAVFDSI---RVKNTISWTAMVSGYAKSGRKEEALE---LFRIL 197
Query: 69 DNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSG 128
N++ W L+ G+ +S EA ++T M + + + ++ +CA L++ +G
Sbjct: 198 PVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAG 257
Query: 129 CQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQV 188
Q+H +I G + +FI NALI Y+ + A +F RD+VS+ +LI G AQ
Sbjct: 258 RQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQH 317
Query: 189 KEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNML 248
+ AL L+ M ++P+ TFV + AC+ + G++ + K+ G + ++
Sbjct: 318 GQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYG-IRPSLQ 376
Query: 249 LKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGK----IERARQLFDQ 304
T ++++ + GL++ AE + TM W++++S R+G+ I A L
Sbjct: 377 HYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSS 436
Query: 305 MDQRDLVSWTAMISGYSQV---GGFSQALELFGKME 337
+D ++ + + Y+ G S+A G+ME
Sbjct: 437 FKLKDPSTYILLSNIYASASLWGKVSEARRKLGEME 472
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 244/666 (36%), Positives = 366/666 (54%), Gaps = 44/666 (6%)
Query: 61 SRILFSQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCA 120
+R LF +I P+ +NTL+ GY+ + A+VL+ M G + FT ++ +C
Sbjct: 93 ARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGF-EVDGFTLSGLIAACC 151
Query: 121 -RLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEG-SLARDLVSY 178
R+ K Q+HC + G + + NA + +YS G + A VF G RD VS+
Sbjct: 152 DRVDLIK---QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSW 208
Query: 179 NTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYK 238
N++I Y Q KE AL L+++M + D FT ++ +A T L+ G+QFH + K
Sbjct: 209 NSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIK 268
Query: 239 NLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERA 298
N + + +I+ Y+KCG + GM S
Sbjct: 269 --AGFHQNSHVGSGLIDFYSKCGGCD---------GMYDS-------------------- 297
Query: 299 RQLFDQMDQRDLVSWTAMISGYSQVGGFSQ-ALELFGKMESLGIHPDEVTMVAVLRACVG 357
++F ++ DLV W MISGYS S+ A++ F +M+ +G PD+ + V V AC
Sbjct: 298 EKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSN 357
Query: 358 LGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLF 417
L + K++H I++ + I + A+I +Y K G++ A VF ++P+ L VS F
Sbjct: 358 LSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPE-LNAVS-F 415
Query: 418 NSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESML- 476
N +I G AQHG G ++ +++ M G+ P+ +TFV VL AC+H G V+EG+++F +M
Sbjct: 416 NCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKE 475
Query: 477 NYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGE 536
+ I+P+ EHY CM+DLL R G+L+EA I +MPY SV W ALL ACR H+N + E
Sbjct: 476 TFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAE 535
Query: 537 IAGQKLLDLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTL 596
A +L+ ++P YV+L+NM A+ +WEE VRK M I+K PG S+IE
Sbjct: 536 RAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKK 595
Query: 597 HRFLASKKSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVVFDVDEEEKETV---VSYHSE 653
H F+A SHP +E+ L++M K+K GYV + + DE + + +HSE
Sbjct: 596 HVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSE 655
Query: 654 KLALAFGLINSRSKETIRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKKGNC 713
KLA+AFGL+++R E + + KNLRICGDCH A K +S + REI+VRD +RFH FK G C
Sbjct: 656 KLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKC 715
Query: 714 SCMDFW 719
SC D+W
Sbjct: 716 SCGDYW 721
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 209/447 (46%), Gaps = 50/447 (11%)
Query: 18 CKSLKQALQIHGQIVHSGLNHHIS-SSQLISFFALSGCKNGLFRSRI-LFSQIDNPNIFI 75
C + Q+H V G + + S ++ +++++ K GL R + +F +D +
Sbjct: 151 CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYS----KGGLLREAVSVFYGMDELRDEV 206
Query: 76 -WNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFKSGCQIHCH 134
WN+++ Y + +AL LY M+ KG + FT VLN+ L G Q H
Sbjct: 207 SWNSMIVAYGQHKEGAKALALYKEMIFKGF-KIDMFTLASVLNALTSLDHLIGGRQFHGK 265
Query: 135 IIKFGLEFDLFIRNALIHFYSIFGYIN---NAHKVFEGSLARDLVSYNTLINGYAQVKEP 191
+IK G + + + LI FYS G + ++ KVF+ L+ DLV +NT+I+GY+ +E
Sbjct: 266 LIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEEL 325
Query: 192 C-PALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNML-L 249
A+ FR+MQ +PD +FV + SAC+ L+ P KQ H + K+ + SN + +
Sbjct: 326 SEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSH--IPSNRISV 383
Query: 250 KTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQRD 309
A+I++Y K G + A VF D+M + +
Sbjct: 384 NNALISLYYKSGNLQDARWVF--------------------------------DRMPELN 411
Query: 310 LVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQ 369
VS+ MI GY+Q G ++AL L+ +M GI P+++T VAVL AC G +D G+
Sbjct: 412 AVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFN 471
Query: 370 QYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGL 429
E + +ID+ + G ++ A +P +V+ + +++ +H
Sbjct: 472 TMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVA-WAALLGACRKH-- 528
Query: 430 GETSIAVFREMELMGLKPDGVTFVTVL 456
++A ELM ++P T +L
Sbjct: 529 KNMALAERAANELMVMQPLAATPYVML 555
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 151/300 (50%), Gaps = 5/300 (1%)
Query: 9 SSLLALLESCKSLKQALQIHGQIVHSGL--NHHISSSQLISFFALSGCKNGLFRSRILFS 66
+S+L L S L Q HG+++ +G N H+ S LI F++ G +G++ S +F
Sbjct: 244 ASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSG-LIDFYSKCGGCDGMYDSEKVFQ 302
Query: 67 QIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSFK 126
+I +P++ +WNT++ GYS ++ E V + + P++ +F V ++C+ LSS
Sbjct: 303 EILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPS 362
Query: 127 SGCQIHCHIIKFGLEFD-LFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGY 185
QIH IK + + + + NALI Y G + +A VF+ + VS+N +I GY
Sbjct: 363 QCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGY 422
Query: 186 AQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGS 245
AQ AL L+++M DS I P+ TFVA+ SAC G+++ + + +
Sbjct: 423 AQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFK-IEP 481
Query: 246 NMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQM 305
+ +I++ + G + AER M + AW++++ + + A + +++
Sbjct: 482 EAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANEL 541
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 144/294 (48%), Gaps = 9/294 (3%)
Query: 212 TFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFS 271
TF + D GK HA+ K++ V S+ L +N+Y+KCG ++ A F
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSI--VASSTYLSNHFVNLYSKCGRLSYARAAFY 67
Query: 272 TMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALE 331
+ + +++ ++ Y ++ KI ARQLFD++ Q D VS+ +ISGY+ A+
Sbjct: 68 STE-EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMV 126
Query: 332 LFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMY 391
LF +M LG D T+ ++ AC +D K+LH + F + A + Y
Sbjct: 127 LFKRMRKLGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSG-GFDSYSSVNNAFVTYY 183
Query: 392 AKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFREMELMGLKPDGVT 451
+K G + A+SVFY + + VS +NS+I QH G ++A+++EM G K D T
Sbjct: 184 SKGGLLREAVSVFYGMDELRDEVS-WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFT 242
Query: 452 FVTVLCACSHGGLVEEGKQFFESMLNYGIKPQMEHYGC-MVDLLARDGRLDEAY 504
+VL A + + G+QF ++ G Q H G ++D ++ G D Y
Sbjct: 243 LASVLNALTSLDHLIGGRQFHGKLIKAGFH-QNSHVGSGLIDFYSKCGGCDGMY 295
Score = 109 bits (273), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 196/467 (41%), Gaps = 76/467 (16%)
Query: 114 FVLNSCARLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLAR 173
+L S A F +G +H +K + ++ N ++ YS G ++ A F +
Sbjct: 14 LLLKSVAERDLF-TGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEP 72
Query: 174 DLVSYNTLI-------------------------------NGYAQVKEPCPALWLFRKMQ 202
++ SYN ++ +GYA +E A+ LF++M+
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 203 DSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGL 262
+ D FT + +AC + D + KQ H + G S + A + Y+K GL
Sbjct: 133 KLGFEVDGFTLSGLIAACCDRVD--LIKQLHC--FSVSGGFDSYSSVNNAFVTYYSKGGL 188
Query: 263 MNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGYSQ 322
+ A VF M + +W+SMI Y G +
Sbjct: 189 LREAVSVFYGMDELRDEVSWNSMIVAY-----------------------------GQHK 219
Query: 323 VGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRNIF 382
G ++AL L+ +M G D T+ +VL A L L G++ H + I+ F +N
Sbjct: 220 EG--AKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIK-AGFHQNSH 276
Query: 383 LTTAVIDMYAKCGSID---TALSVFYKIPKNLKTVSLFNSIISGLA-QHGLGETSIAVFR 438
+ + +ID Y+KCG D + VF +I + ++N++ISG + L E ++ FR
Sbjct: 277 VGSGLIDFYSKCGGCDGMYDSEKVFQEILS--PDLVVWNTMISGYSMNEELSEEAVKSFR 334
Query: 439 EMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLNYGIKP-QMEHYGCMVDLLARD 497
+M+ +G +PD +FV V ACS+ + KQ + I ++ ++ L +
Sbjct: 335 QMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKS 394
Query: 498 GRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIAGQKLLD 544
G L +A + MP + N+V + ++ H + + Q++LD
Sbjct: 395 GNLQDARWVFDRMP-ELNAVSFNCMIKGYAQHGHGTEALLLYQRMLD 440
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 250/717 (34%), Positives = 406/717 (56%), Gaps = 49/717 (6%)
Query: 10 SLLALLESCKSLKQALQIHGQIVHSGLNHHISSSQLISFFAL----SGCKNGLFRSRILF 65
++++ L +C A ++ +I S L SS+L AL + C RIL
Sbjct: 286 TIVSALTACDGFSYA-KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERIL- 343
Query: 66 SQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSF 125
Q++N ++ WN+L++GY ++ +EAL ++ M++ G S + + ++ + RLS+
Sbjct: 344 RQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKS-DEVSMTSIIAASGRLSNL 402
Query: 126 KSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGY 185
+G ++H ++IK G + +L + N LI YS + F +DL+S+ T+I GY
Sbjct: 403 LAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGY 462
Query: 186 AQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHA-VVYKNLGCVG 244
AQ AL LFR + ++ D ++ A + L I K+ H ++ K L
Sbjct: 463 AQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL---- 518
Query: 245 SNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQ 304
+ +++ ++++Y KC M A RVF ++ +GK
Sbjct: 519 LDTVIQNELVDVYGKCRNMGYATRVFESI------------------KGK---------- 550
Query: 305 MDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFG 364
D+VSWT+MIS + G S+A+ELF +M G+ D V ++ +L A L AL+ G
Sbjct: 551 ----DVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKG 606
Query: 365 KRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGL 424
+ +H Y+ F + AV+DMYA CG + +A +VF +I + K + + S+I+
Sbjct: 607 REIHC-YLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIER--KGLLQYTSMINAY 663
Query: 425 AQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLN-YGIKPQ 483
HG G+ ++ +F +M + PD ++F+ +L ACSH GL++EG+ F + M + Y ++P
Sbjct: 664 GMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPW 723
Query: 484 MEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGEIAGQKLL 543
EHY C+VD+L R + EA+ ++ M + + +W ALLAACR H +IGEIA Q+LL
Sbjct: 724 PEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLL 783
Query: 544 DLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTLHRFLASK 603
+LEP + + VL+SN+ AE RW + +VR M SG++K PG S+IE +G +H+F A
Sbjct: 784 ELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARD 843
Query: 604 KSHPQTKEIELMLKDMTMKL-KSAGYVPNTVQVVFDVDEEEKETVVSYHSEKLALAFGLI 662
KSHP++KEI L ++T KL + GYV +T V+ +VDE EK ++ HSE++A+A+GL+
Sbjct: 844 KSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLL 903
Query: 663 NSRSKETIRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKKGNCSCMDFW 719
+ + +RITKNLR+C DCH KL+S+++RR+I++RDA RFH F+ G CSC D W
Sbjct: 904 RTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 218/454 (48%), Gaps = 48/454 (10%)
Query: 14 LLESC---KSLKQALQIHGQIVHSGLNHHIS--SSQLISFFALSGCKNGLFRSRILFSQI 68
+LE C +++ Q Q+H +I + + + + +L+ + G L + +F ++
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCG---SLDDAEKVFDEM 142
Query: 69 DNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFT-FPFVLNSCARLSSFKS 127
+ F WNT++ Y + P AL LY +M +G+ P + FP +L +CA+L +S
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGV--PLGLSSFPALLKACAKLRDIRS 200
Query: 128 GCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLAR-DLVSYNTLINGYA 186
G ++H ++K G FI NAL+ Y+ ++ A ++F+G + D V +N++++ Y+
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 187 QVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSN 246
+ L LFR+M + P+++T V+ +AC + ++GK+ HA V K+ S
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKS-STHSSE 319
Query: 247 MLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMD 306
+ + A+I MY +CG M AER+ M + W+S+I GY
Sbjct: 320 LYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLIKGYV---------------- 362
Query: 307 QRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKR 366
Q + +ALE F M + G DEV+M +++ A L L G
Sbjct: 363 ---------------QNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGME 407
Query: 367 LHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQ 426
LH I++ + N+ + +IDMY+KC F ++ K + + ++I+G AQ
Sbjct: 408 LHAYVIKH-GWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD--KDLISWTTVIAGYAQ 464
Query: 427 HGLGETSIAVFREMELMGLKPDGVTFVTVLCACS 460
+ ++ +FR++ ++ D + ++L A S
Sbjct: 465 NDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 185/416 (44%), Gaps = 43/416 (10%)
Query: 89 PQEALVLYTSMLSKGI----VSPNNF---TFPFVLNSCARLSSFKSGCQIHCHIIKFGLE 141
P L + +L++ VS NN F +VL C + + G Q+H I K
Sbjct: 53 PSPKLACFDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPS 112
Query: 142 FDL-FIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGYAQVKEPCPALWLFRK 200
F+L F+ L+ Y G +++A KVF+ R ++NT+I Y EP AL L+
Sbjct: 113 FELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWN 172
Query: 201 MQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCVGSNMLLKTAVINMYAKC 260
M+ + +F A+ AC +L D R G + H+++ K LG S + A+++MYAK
Sbjct: 173 MRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVK-LG-YHSTGFIVNALVSMYAKN 230
Query: 261 GLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQLFDQMDQRDLVSWTAMISGY 320
++ A R+F W+S++S Y+ GK
Sbjct: 231 DDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGK-------------------------- 264
Query: 321 SQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGALDFGKRLHQQYIENVVFGRN 380
+ LELF +M G P+ T+V+ L AC G GK +H +++
Sbjct: 265 -----SLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 319
Query: 381 IFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFREM 440
+++ A+I MY +CG + A + ++ N V +NS+I G Q+ + + ++ F +M
Sbjct: 320 LYVCNALIAMYTRCGKMPQAERILRQM--NNADVVTWNSLIKGYVQNLMYKEALEFFSDM 377
Query: 441 ELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLNYGIKPQMEHYGCMVDLLAR 496
G K D V+ +++ A + G + ++ +G ++ ++D+ ++
Sbjct: 378 IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSK 433
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 144/348 (41%), Gaps = 51/348 (14%)
Query: 188 VKEPCPALWLFRKMQDSCIQP----------DAFTFVAMFSACTELNDPRIGKQFHAVVY 237
V+ P P L F + Q +AF +V C + G+Q H+ ++
Sbjct: 50 VQVPSPKLACFDGVLTEAFQRLDVSENNSPVEAFAYV--LELCGKRRAVSQGRQLHSRIF 107
Query: 238 KNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIER 297
K + L V MY KCG ++ AE+V
Sbjct: 108 KTFPSFELDFLAGKLVF-MYGKCGSLDDAEKV---------------------------- 138
Query: 298 ARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVG 357
FD+M R +W MI Y G + AL L+ M G+ + A+L+AC
Sbjct: 139 ----FDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAK 194
Query: 358 LGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLF 417
L + G LH ++ + + F+ A++ MYAK + A +F + V L+
Sbjct: 195 LRDIRSGSELHSLLVK-LGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAV-LW 252
Query: 418 NSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESMLN 477
NSI+S + G ++ +FREM + G P+ T V+ L AC + GK+ S+L
Sbjct: 253 NSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLK 312
Query: 478 YGIKPQMEHYGC--MVDLLARDGRLDEAYGLIQSMPYDANSVIWRALL 523
E Y C ++ + R G++ +A +++ M +A+ V W +L+
Sbjct: 313 SSTHSS-ELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 2/175 (1%)
Query: 351 VLRACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKN 410
VL C A+ G++LH + + FL ++ MY KCGS+D A VF ++P
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPD- 144
Query: 411 LKTVSLFNSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQ 470
+T +N++I +G +++A++ M + G+ +F +L AC+ + G +
Sbjct: 145 -RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSE 203
Query: 471 FFESMLNYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAA 525
++ G +V + A++ L A L ++V+W ++L++
Sbjct: 204 LHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSS 258
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust.
Identities = 246/728 (33%), Positives = 390/728 (53%), Gaps = 58/728 (7%)
Query: 7 EHSSLLALLESCKSLKQALQIHGQIVH-------SGLNHHISSSQLISFFALSGCKNGLF 59
+ +L+++L C ++ L G VH SGLN I+S+ LI + C+ L
Sbjct: 5 QRQNLVSILRVCT--RKGLSDQGGQVHCYLLKSGSGLNL-ITSNYLIDMYC--KCREPLM 59
Query: 60 RSRILFSQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSC 119
++ F + N+ W+ LM G+ + + +L L++ M +GI PN FTF L +C
Sbjct: 60 AYKV-FDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIY-PNEFTFSTNLKAC 117
Query: 120 ARLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYN 179
L++ + G QIH +K G E + + N+L+ YS G IN A KVF + R L+S+N
Sbjct: 118 GLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWN 177
Query: 180 TLINGYAQVKEPCPALWLFRKMQDSCIQ--PDAFTFVAMFSACTELNDPRIGKQFHAVVY 237
+I G+ AL F MQ++ I+ PD FT ++ AC+ GKQ H +
Sbjct: 178 AMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLV 237
Query: 238 KNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIER 297
++ S+ + +++++Y KCG + A + F + K+ +WSS+I GY +EG+
Sbjct: 238 RSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQI-KEKTMISWSSLILGYAQEGE--- 293
Query: 298 ARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVG 357
F +A+ LF +++ L D + +++
Sbjct: 294 ----------------------------FVEAMGLFKRLQELNSQIDSFALSSIIGVFAD 325
Query: 358 LGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLF 417
L GK++ Q + G + +V+DMY KCG +D A F ++ LK V +
Sbjct: 326 FALLRQGKQM-QALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEM--QLKDVISW 382
Query: 418 NSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFFESML- 476
+I+G +HGLG+ S+ +F EM ++PD V ++ VL ACSH G+++EG++ F +L
Sbjct: 383 TVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLE 442
Query: 477 NYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNAKIGE 536
+GIKP++EHY C+VDLL R GRL EA LI +MP N IW+ LL+ CR+H + ++G+
Sbjct: 443 THGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGK 502
Query: 537 IAGQKLLDLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPGWSYIEHNGTL 596
G+ LL ++ + A+YV++SN+ + W E R+L + G++K G S++E +
Sbjct: 503 EVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREV 562
Query: 597 HRFLASKKSHPQTKEIELMLKDMTMKLKSA-GYVPNTVQVVFDVDEEEKETVVSYHSEK- 654
H F + + SHP T I+ LK+ +L+ GYV + D+D+E KE + HSEK
Sbjct: 563 HFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKL 622
Query: 655 ---LALAFGLINSRSKETIRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFHLFKKG 711
LALA G +N + K TIR+ KNLR+C DCH K LS+I + +VRDA+RFH F+ G
Sbjct: 623 AIGLALATGGLNQKGK-TIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDG 681
Query: 712 NCSCMDFW 719
CSC D+W
Sbjct: 682 CCSCGDYW 689
>sp|Q9LXE8|PP386_ARATH Pentatricopeptide repeat-containing protein At5g15340,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H91 PE=2
SV=1
Length = 623
Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/619 (36%), Positives = 372/619 (60%), Gaps = 19/619 (3%)
Query: 114 FVLNSCARLSSFKSGCQIHCHIIKFGLEF--DLFIRNALIHFYSIFGYINNAHKVF-EGS 170
+L CA S + G ++H + GL+ ++ NAL FY+ G + A K+F E
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIP 70
Query: 171 LA-RDLVSYNTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIG 229
L+ +D V + TL++ +++ ++ LF +M+ ++ D + V +F C +L D
Sbjct: 71 LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 230 KQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGY 289
+Q H V K +G V +++ + A+++MY KCGL++ +R+F + KS +W+ ++
Sbjct: 131 QQGHGVAVK-MG-VLTSVKVCNALMDMYGKCGLVSEVKRIFEELE-EKSVVSWTVVLDTV 187
Query: 290 TREGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKME-SLGIHPDEVTM 348
+ +ER R++F +M +R+ V+WT M++GY G + LEL +M G + VT+
Sbjct: 188 VKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTL 247
Query: 349 VAVLRACVGLGALDFGKRLHQQYIEN-VVFGR-----NIFLTTAVIDMYAKCGSIDTALS 402
++L AC G L G+ +H ++ ++ G ++ + TA++DMYAKCG+ID++++
Sbjct: 248 CSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMN 307
Query: 403 VFYKIPKNLKTVSLFNSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHG 462
VF + K + V +N++ SGLA HG G I +F +M + +KPD +TF VL ACSH
Sbjct: 308 VFRLMRK--RNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHS 364
Query: 463 GLVEEGKQFFESMLNYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRAL 522
G+V+EG + F S+ YG++P+++HY CMVDLL R G ++EA L++ MP N V+ +L
Sbjct: 365 GIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSL 424
Query: 523 LAACRLHRNAKIGEIAGQKLLDLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQ 582
L +C +H +I E ++L+ + P + + +L+SNM R + A +R + GI+
Sbjct: 425 LGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIR 484
Query: 583 KPPGWSYIEHNGTLHRFLASKKSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVV--FDVD 640
K PG S I N ++HRF + +SHP+TKEI L L ++ +++SAGYVP+ +V + D
Sbjct: 485 KIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGD 544
Query: 641 EEEKETVVSYHSEKLALAFGLINSRSKETIRITKNLRICGDCHLAFKLLSEIYRREIMVR 700
EEKE + HSEKLA+ FGL+ ++ + + KNLRIC DCH A K++S++Y REI++R
Sbjct: 545 LEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIR 604
Query: 701 DAIRFHLFKKGNCSCMDFW 719
D RFH FK G+CSC D+W
Sbjct: 605 DRNRFHQFKGGSCSCSDYW 623
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 121/260 (46%), Gaps = 12/260 (4%)
Query: 56 NGLFRSRILFSQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFV 115
GL R R +F ++ N W ++ GY + +E L L M+ + N T +
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSM 250
Query: 116 LNSCARLSSFKSGCQIHCHIIK----FGLEF---DLFIRNALIHFYSIFGYINNAHKVFE 168
L++CA+ + G +H + +K G E D+ + AL+ Y+ G I+++ VF
Sbjct: 251 LSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFR 310
Query: 169 GSLARDLVSYNTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRI 228
R++V++N L +G A + + +F +M ++PD TF A+ SAC+
Sbjct: 311 LMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDE 369
Query: 229 G-KQFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMIS 287
G + FH++ + L + ++++ + GL+ AE + M + + S++
Sbjct: 370 GWRCFHSLRFYGL---EPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLG 426
Query: 288 GYTREGKIERARQLFDQMDQ 307
+ GK+E A ++ ++ Q
Sbjct: 427 SCSVHGKVEIAERIKRELIQ 446
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 232/673 (34%), Positives = 367/673 (54%), Gaps = 56/673 (8%)
Query: 64 LFSQIDNP-------------NIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNF 110
++S++D+P N+ W +L+ G +++ ALV + M +G+V PN+F
Sbjct: 51 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVV-PNDF 109
Query: 111 TFPFVLNSCARLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGS 170
TFP + A L +G QIH +K G D+F+ + Y ++A K+F+
Sbjct: 110 TFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEI 169
Query: 171 LARDLVSYNTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGK 230
R+L ++N I+ P A+ F + + P++ TF A +AC++ +G
Sbjct: 170 PERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGM 229
Query: 231 QFHAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYT 290
Q H +V ++ +++ + +I+ Y KC + +E +F+ MG +K+ +W S+++ Y
Sbjct: 230 QLHGLVLRS--GFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMG-TKNAVSWCSLVAAYV 286
Query: 291 REGKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVA 350
+ + E+A L+ + ++D+V + + + +
Sbjct: 287 QNHEDEKASVLYLR-SRKDIVETS------------------------------DFMISS 315
Query: 351 VLRACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIP-K 409
VL AC G+ L+ G+ +H ++ V R IF+ +A++DMY KCG I+ + F ++P K
Sbjct: 316 VLSACAGMAGLELGRSIHAHAVKACV-ERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK 374
Query: 410 NLKTVSLFNSIISGLAQHGLGETSIAVFREMELMGL--KPDGVTFVTVLCACSHGGLVEE 467
NL T NS+I G A G + ++A+F EM G P+ +TFV++L ACS G VE
Sbjct: 375 NLVTR---NSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVEN 431
Query: 468 GKQFFESMLN-YGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAAC 526
G + F+SM + YGI+P EHY C+VD+L R G ++ AY I+ MP +W AL AC
Sbjct: 432 GMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNAC 491
Query: 527 RLHRNAKIGEIAGQKLLDLEPDHGAHYVLLSNMLAETYRWEEARQVRKLMDDSGIQKPPG 586
R+H ++G +A + L L+P ++VLLSN A RW EA VR+ + GI+K G
Sbjct: 492 RMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAG 551
Query: 587 WSYIEHNGTLHRFLASKKSHPQTKEIELMLKDMTMKLKSAGYVPNTVQVVFDVDEEEKET 646
+S+I +H F A +SH KEI+ L + ++++AGY P+ ++D++EEEK
Sbjct: 552 YSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAA 611
Query: 647 VVSYHSEKLALAFGLINSRSKETIRITKNLRICGDCHLAFKLLSEIYRREIMVRDAIRFH 706
VS+HSEKLALAFGL++ IRITKNLRICGDCH FK +S +REI+VRD RFH
Sbjct: 612 EVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFH 671
Query: 707 LFKKGNCSCMDFW 719
FK G CSC D+W
Sbjct: 672 RFKDGICSCKDYW 684
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 179/422 (42%), Gaps = 37/422 (8%)
Query: 61 SRILFSQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCA 120
+R LF +I N+ WN + P+EA+ + + PN+ TF LN+C+
Sbjct: 162 ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIE-FRRIDGHPNSITFCAFLNACS 220
Query: 121 RLSSFKSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNT 180
G Q+H +++ G + D+ + N LI FY I ++ +F ++ VS+ +
Sbjct: 221 DWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCS 280
Query: 181 LINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNL 240
L+ Y Q E A L+ + + ++ F ++ SAC + +G+ HA K
Sbjct: 281 LVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVK-- 338
Query: 241 GCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIERARQ 300
CV + + +A+++MY KCG + +E+ F M K+ +S+I GY +G+++ A
Sbjct: 339 ACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDMALA 397
Query: 301 LFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVLRACVGLGA 360
LF++M R G P+ +T V++L AC GA
Sbjct: 398 LFEEMAPR-----------------------------GCGPTPNYMTFVSLLSACSRAGA 428
Query: 361 LDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLKTVSLFNSI 420
++ G ++ + ++DM + G ++ A K+P T+S++ ++
Sbjct: 429 VENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQ-PTISVWGAL 487
Query: 421 ISGLAQHGLGETSIAVFREMELMGLKP-DGVTFVTVLCACSHGGLVEEGKQFFESMLNYG 479
+ H G+ + + L L P D V + + G E E + G
Sbjct: 488 QNACRMH--GKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVG 545
Query: 480 IK 481
IK
Sbjct: 546 IK 547
Score = 116 bits (290), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 186/433 (42%), Gaps = 50/433 (11%)
Query: 114 FVLNSCARLSSFKSGCQIHCHIIK-FGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLA 172
+L + SS + G +H I+K F+ N LI+ YS + +A V + A
Sbjct: 11 LLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPA 70
Query: 173 RDLVSYNTLINGYAQVKEPCPALWLFRKMQDSCIQPDAFTFVAMFSACTELNDPRIGKQF 232
R++VS+ +LI+G AQ AL F +M+ + P+ FTF F A L P GKQ
Sbjct: 71 RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 130
Query: 233 HAVVYKNLGCVGSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTRE 292
HA+ K C +++++ C +M Y +
Sbjct: 131 HALAVK---C--------GRILDVFVGCSAFDM-----------------------YCKT 156
Query: 293 GKIERARQLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGIHPDEVTMVAVL 352
+ AR+LFD++ +R+L +W A IS G +A+E F + + HP+ +T A L
Sbjct: 157 RLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFL 216
Query: 353 RACVGLGALDFGKRLHQQYIENVVFGRNIFLTTAVIDMYAKCGSIDTALSVFYKIPKNLK 412
AC L+ G +LH + + F ++ + +ID Y KC I ++ +F ++ K
Sbjct: 217 NACSDWLHLNLGMQLHGLVLRS-GFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM--GTK 273
Query: 413 TVSLFNSIISGLAQHGLGETSIAVFREMELMGLKPDGVTFVTVLCACSHGGLVEEGKQFF 472
+ S+++ Q+ E + ++ ++ +VL AC+ +E G+
Sbjct: 274 NAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIH 333
Query: 473 ESMLNYGIKPQMEHYGCMVDLLARDGRLDEAYGLIQSMPYDANSVIWRALLAACRLHRNA 532
+ ++ + +VD+ + G ++++ MP + N V RN+
Sbjct: 334 AHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVT-----------RNS 381
Query: 533 KIGEIAGQKLLDL 545
IG A Q +D+
Sbjct: 382 LIGGYAHQGQVDM 394
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 167/342 (48%), Gaps = 16/342 (4%)
Query: 10 SLLALLESCKS---LKQALQIHGQIVHSGLNHHIS-SSQLISFFALSGCKNGLFRSRILF 65
+ A L +C L +Q+HG ++ SG + +S + LI F+ CK + S I+F
Sbjct: 211 TFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYG--KCKQ-IRSSEIIF 267
Query: 66 SQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSMLSKGIVSPNNFTFPFVLNSCARLSSF 125
+++ N W +L+ Y ++ ++A VLY K IV ++F VL++CA ++
Sbjct: 268 TEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRS-RKDIVETSDFMISSVLSACAGMAGL 326
Query: 126 KSGCQIHCHIIKFGLEFDLFIRNALIHFYSIFGYINNAHKVFEGSLARDLVSYNTLINGY 185
+ G IH H +K +E +F+ +AL+ Y G I ++ + F+ ++LV+ N+LI GY
Sbjct: 327 ELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGY 386
Query: 186 AQVKEPCPALWLFRKM--QDSCIQPDAFTFVAMFSACTELNDPRIGKQFHAVVYKNLGCV 243
A + AL LF +M + P+ TFV++ SAC+ G + + G +
Sbjct: 387 AHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYG-I 445
Query: 244 GSNMLLKTAVINMYAKCGLMNMAERVFSTMGMSKSTAAWSSMISGYTREGKIE----RAR 299
+ +++M + G++ A M + + + W ++ + GK + A
Sbjct: 446 EPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAE 505
Query: 300 QLFDQMDQRDLVSWTAMISGYSQVGGFSQALELFGKMESLGI 341
LF ++D +D + + + ++ G +++A + +++ +GI
Sbjct: 506 NLF-KLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGI 546
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 251,571,062
Number of Sequences: 539616
Number of extensions: 10216131
Number of successful extensions: 43807
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 265
Number of HSP's that attempted gapping in prelim test: 32470
Number of HSP's gapped (non-prelim): 2583
length of query: 719
length of database: 191,569,459
effective HSP length: 125
effective length of query: 594
effective length of database: 124,117,459
effective search space: 73725770646
effective search space used: 73725770646
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 65 (29.6 bits)