Your job contains 1 sequence.
>047483
MMATFISSASSSFLILQPLKPPKHSRLSKAKTLTSTIKATSSQPKPNNANARKPTPRNRR
RSSYGSSRRSALKKTFAQEQVTFTAPVSSDPHVGIIGGGMAGLACALSLDKRGVKSTVFD
TGNHGLGGRMGTRMIGPQPLIFDHAAQFFTVNDSRFHELVDGWLERGLVRPWEGVIGELE
VGGQFTPFPSSPPKYIGVNGMRPLADSLLAQTSMVSIVRPCWISNLQPFNGMWHLSENVK
LRGQFDVVVIAHN
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 047483
(253 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2084903 - symbol:AT3G04650 species:3702 "Arabi... 759 2.7e-75 1
TAIR|locus:2012030 - symbol:AT1G56000 species:3702 "Arabi... 210 1.2e-16 1
TAIR|locus:2012005 - symbol:AT1G55980 species:3702 "Arabi... 210 2.2e-16 1
UNIPROTKB|Q48MT7 - symbol:PSPPH_1014 "Uncharacterized pro... 166 5.8e-12 1
UNIPROTKB|Q4K6B1 - symbol:PFL_5143 "FAD dependent oxidore... 164 9.7e-12 1
>TAIR|locus:2084903 [details] [associations]
symbol:AT3G04650 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0009507 "chloroplast"
evidence=IDA] GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AC011437 eggNOG:COG3380 EMBL:AY050342 EMBL:BT004515
IPI:IPI00525811 RefSeq:NP_566235.1 UniGene:At.26589
ProteinModelPortal:Q9SR09 SMR:Q9SR09 PaxDb:Q9SR09 PRIDE:Q9SR09
EnsemblPlants:AT3G04650.1 GeneID:819623 KEGG:ath:AT3G04650
TAIR:At3g04650 HOGENOM:HOG000244162 InParanoid:Q9SR09 OMA:QARIASW
PhylomeDB:Q9SR09 ProtClustDB:CLSN2688068 Genevestigator:Q9SR09
Uniprot:Q9SR09
Length = 486
Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
Identities = 149/244 (61%), Positives = 181/244 (74%)
Query: 17 QPLK-----PPKHSRLSKAKTLTSTIKATSSQPKPNNANARKPT-PXXXXXXXXXXXXXX 70
QPLK P+++ LS + + +T + ++ K +N ++R P
Sbjct: 14 QPLKLKTLAQPRNTDLSTTRKIITTCDSQNNTGK-SNPSSRNPNFQKRRNSSKYGTSRRS 72
Query: 71 ALKKTFAQEQVTFTAPVSSDPHVGIIGGGMAGLACALSLDKRGVKSTVFDTGNHGLGGRM 130
LKK+F QEQVTFTA VS DPHV IIGGGMAGL CAL+L+ RGV+STVFDTG HGLGGR+
Sbjct: 73 ILKKSFLQEQVTFTARVSDDPHVAIIGGGMAGLVCALNLEARGVQSTVFDTGIHGLGGRL 132
Query: 131 GTRMIGPQPLIFDHAAQFFTVNDSRFHELVDGWLERGLVRPWEGVIGELEVGGQFTPFPS 190
GTR+I PQ LIFDHAAQFFT +DSRF +LVDGWLE+GLVR W+G +GELE+GG F+ FPS
Sbjct: 133 GTRIIEPQGLIFDHAAQFFTADDSRFIKLVDGWLEKGLVREWKGAVGELEIGGSFSQFPS 192
Query: 191 S-PPKYIGVNGMRPLADSLLAQTSMVSIVRPCWISNLQPFNGMWHLSENVKLRGQFDVVV 249
S PP+YI NGMR LADSLL ++ MV++VRPCWIS L+P NGMWHLSEN RGQFDV+V
Sbjct: 193 SSPPRYIAANGMRSLADSLLLESQMVNLVRPCWISKLEPLNGMWHLSENGTPRGQFDVIV 252
Query: 250 IAHN 253
IAHN
Sbjct: 253 IAHN 256
>TAIR|locus:2012030 [details] [associations]
symbol:AT1G56000 species:3702 "Arabidopsis thaliana"
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] EMBL:CP002684
UniGene:At.48312 UniGene:At.71152 eggNOG:COG3380 UniGene:At.48311
EMBL:AY069897 EMBL:AY142026 EMBL:AK316780 IPI:IPI00533415
RefSeq:NP_175996.2 ProteinModelPortal:Q8VYV2 SMR:Q8VYV2
IntAct:Q8VYV2 PRIDE:Q8VYV2 EnsemblPlants:AT1G56000.1 GeneID:842051
KEGG:ath:AT1G56000 TAIR:At1g56000 InParanoid:Q8VYV2 KO:K06955
OMA:APCWTLM PhylomeDB:Q8VYV2 ProtClustDB:CLSN2690468
Genevestigator:Q8VYV2 Uniprot:Q8VYV2
Length = 384
Score = 210 (79.0 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 59/169 (34%), Positives = 87/169 (51%)
Query: 93 VGIIGGGMAGLACALSLDKRGVKSTVFDTGNHGLGGRMGTRM-IGP--QPLIFDHAAQFF 149
V +IG G++G CA +L + GV T+FD+G G GGRM R IG + L+FDH A FF
Sbjct: 23 VAVIGSGISGAVCASTLARNGVSVTIFDSGR-GPGGRMSQRREIGEDGKELMFDHGAPFF 81
Query: 150 TVNDSRFHELVDGWLERGLVRPWEGVIGELE-VGGQFTPFPSS--PPKYIGVNGMRPLAD 206
V++S LV W RG V W+ V G + +F KY+GV GM ++
Sbjct: 82 CVSNSDAMALVHEWESRGFVSEWKQVFGSFDCASNKFLGIQQEGDAKKYVGVPGMNSISK 141
Query: 207 SLLAQTSMVS-----IVRPCWISNLQPFNGMWHLSENV-KLRGQFDVVV 249
+L ++ + S I + W+ P W L+++ + G+FD VV
Sbjct: 142 ALCNESGVKSMFGTGIAKMEWLEEEIP----WLLTDSKGENLGRFDGVV 186
>TAIR|locus:2012005 [details] [associations]
symbol:AT1G55980 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR016040 EMBL:CP002684 GO:GO:0000166
Gene3D:3.40.50.720 UniGene:At.71152 IPI:IPI00532476
RefSeq:NP_175994.2 UniGene:At.48311 ProteinModelPortal:F4I3I1
SMR:F4I3I1 EnsemblPlants:AT1G55980.1 GeneID:842049
KEGG:ath:AT1G55980 OMA:ENAFRCK PhylomeDB:F4I3I1 Uniprot:F4I3I1
Length = 466
Score = 210 (79.0 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 59/169 (34%), Positives = 87/169 (51%)
Query: 93 VGIIGGGMAGLACALSLDKRGVKSTVFDTGNHGLGGRMGTRM-IGP--QPLIFDHAAQFF 149
V +IG G++G CA +L + GV T+FD+G G GGRM R IG + L+FDH A FF
Sbjct: 161 VAVIGSGISGAVCASTLARNGVSVTIFDSGR-GPGGRMSQRREIGEDGKELMFDHGAPFF 219
Query: 150 TVNDSRFHELVDGWLERGLVRPWEGVIGELE-VGGQFTPFPSS--PPKYIGVNGMRPLAD 206
V++S LV W RG V W+ V G + +F KY+GV GM ++
Sbjct: 220 CVSNSDAMALVHEWESRGFVSEWKQVFGSFDCASNKFLGIQQEGDAKKYVGVPGMNSISK 279
Query: 207 SLLAQTSMVS-----IVRPCWISNLQPFNGMWHLSENV-KLRGQFDVVV 249
+L ++ + S I + W+ P W L+++ + G+FD VV
Sbjct: 280 ALCNESGVKSMFGTGIAKMEWLEEEIP----WLLTDSKGENLGRFDGVV 324
>UNIPROTKB|Q48MT7 [details] [associations]
symbol:PSPPH_1014 "Uncharacterized protein" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002937 Pfam:PF01593 GO:GO:0016491 EMBL:CP000058
GenomeReviews:CP000058_GR eggNOG:COG3380 KO:K06955 OMA:QARIASW
RefSeq:YP_273285.1 ProteinModelPortal:Q48MT7 SMR:Q48MT7
STRING:Q48MT7 GeneID:3560140 KEGG:psp:PSPPH_1014 PATRIC:19971120
HOGENOM:HOG000225370 ProtClustDB:CLSK868815 Uniprot:Q48MT7
Length = 328
Score = 166 (63.5 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 49/160 (30%), Positives = 77/160 (48%)
Query: 93 VGIIGGGMAGLACALSLDKRGVKSTVFDTGNHGLGGRMGTRMIGPQPLIFDHAAQFFTVN 152
+ IIG G+AGL+ A +L G + +FD + G GGRM ++ L D AQ+FT
Sbjct: 5 IAIIGTGIAGLSAAQALTSAGHQVHLFDK-SRGSGGRMSSKRSDAGSL--DMGAQYFTAR 61
Query: 153 DSRFHELVDGWLERGLVRPWEGVIGELEVGGQFTPFPSSPPKYIGVNGMRPLADSLLAQT 212
D RF V W +G V W ++ GG+ +P P +++G GM + ++
Sbjct: 62 DRRFATAVKQWQAQGHVSEWTPLLYNFH-GGRLSPSPDEQVRWVGEPGMSAITRAMRGDL 120
Query: 213 SMVSIVRPCWISNLQPFNGMWHLSE-NVKLRGQFDVVVIA 251
VS C I+++ W+L + + G F V+IA
Sbjct: 121 P-VSF--SCRITDVFRGEQHWNLLDAEGENHGPFSHVIIA 157
>UNIPROTKB|Q4K6B1 [details] [associations]
symbol:PFL_5143 "FAD dependent oxidoreductase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002937 Pfam:PF01593 GO:GO:0016491 EMBL:CP000076
GenomeReviews:CP000076_GR eggNOG:COG3380 KO:K06955 OMA:QARIASW
HOGENOM:HOG000225370 ProtClustDB:CLSK868815 RefSeq:YP_262222.1
ProteinModelPortal:Q4K6B1 SMR:Q4K6B1 STRING:Q4K6B1 GeneID:3479547
KEGG:pfl:PFL_5143 PATRIC:19879749
BioCyc:PFLU220664:GIX8-5184-MONOMER Uniprot:Q4K6B1
Length = 328
Score = 164 (62.8 bits), Expect = 9.7e-12, P = 9.7e-12
Identities = 50/160 (31%), Positives = 72/160 (45%)
Query: 93 VGIIGGGMAGLACALSLDKRGVKSTVFDTGNHGLGGRMGTRMIGPQPLIFDHAAQFFTVN 152
+ IIG G+AGL+ A +L G +FD + G GGRM ++ L D AQ+FT
Sbjct: 5 IAIIGTGIAGLSAAQALRDAGHTVHLFDK-SRGSGGRMSSKRSDAGSL--DLGAQYFTAR 61
Query: 153 DSRFHELVDGWLERGLVRPWEGVIGELEVGGQFTPFPSSPPKYIGVNGMRPLADSLLAQT 212
D RF V W +G V W + GGQ +P P +++G M + +L+
Sbjct: 62 DRRFVTEVQRWQAKGWVAEWTPQLYNSH-GGQLSPSPDEQTRWVGTPRMSAITRALIGD- 119
Query: 213 SMVSIVRPCWISNLQPFNGMWHLSENVKL-RGQFDVVVIA 251
+ C I+ + WHL + G F VVIA
Sbjct: 120 --LEAHFACRITEVFRGEQHWHLQDAEGFTHGPFSHVVIA 157
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 253 223 0.00098 112 3 11 22 0.40 33
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 602 (64 KB)
Total size of DFA: 176 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.06u 0.13s 19.19t Elapsed: 00:00:01
Total cpu time: 19.06u 0.13s 19.19t Elapsed: 00:00:01
Start: Sat May 11 09:53:19 2013 End: Sat May 11 09:53:20 2013