Query 047489
Match_columns 288
No_of_seqs 113 out of 1166
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 20:23:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047489.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047489hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 4.4E-67 1.5E-71 480.5 30.9 286 1-288 22-307 (490)
2 3rh9_A Succinate-semialdehyde 100.0 4E-64 1.4E-68 463.0 34.6 283 2-288 28-311 (506)
3 3ed6_A Betaine aldehyde dehydr 100.0 5.2E-64 1.8E-68 463.6 33.4 283 2-288 49-334 (520)
4 2o2p_A Formyltetrahydrofolate 100.0 5E-64 1.7E-68 463.4 32.7 286 2-288 53-343 (517)
5 3ifg_A Succinate-semialdehyde 100.0 3.9E-64 1.3E-68 461.4 31.4 283 2-288 29-312 (484)
6 1bxs_A Aldehyde dehydrogenase; 100.0 6.5E-64 2.2E-68 461.4 32.8 286 2-288 37-324 (501)
7 3ros_A NAD-dependent aldehyde 100.0 3.6E-64 1.2E-68 461.3 30.6 283 1-288 4-286 (484)
8 3b4w_A Aldehyde dehydrogenase; 100.0 1E-63 3.6E-68 459.8 33.2 285 2-288 25-309 (495)
9 1a4s_A ALDH, betaine aldehyde 100.0 2E-63 6.8E-68 458.7 33.7 281 3-288 38-318 (503)
10 3u4j_A NAD-dependent aldehyde 100.0 1.7E-63 5.8E-68 461.0 33.2 283 2-288 39-325 (528)
11 3ek1_A Aldehyde dehydrogenase; 100.0 6.3E-64 2.1E-68 461.5 29.5 283 2-288 49-332 (504)
12 3qan_A 1-pyrroline-5-carboxyla 100.0 4.3E-63 1.5E-67 459.2 33.9 283 2-288 52-342 (538)
13 3k2w_A Betaine-aldehyde dehydr 100.0 2.1E-63 7E-68 458.4 31.1 282 2-287 29-311 (497)
14 3iwj_A Putative aminoaldehyde 100.0 4.4E-63 1.5E-67 456.8 33.2 285 2-288 24-315 (503)
15 4f3x_A Putative aldehyde dehyd 100.0 3.4E-63 1.2E-67 456.3 32.4 283 2-288 41-324 (498)
16 1o04_A Aldehyde dehydrogenase, 100.0 1.9E-63 6.4E-68 458.3 30.5 286 2-288 36-323 (500)
17 2d4e_A 5-carboxymethyl-2-hydro 100.0 2.2E-63 7.6E-68 459.6 31.0 283 2-288 43-326 (515)
18 3prl_A NADP-dependent glyceral 100.0 4.2E-63 1.4E-67 456.5 30.6 281 2-288 28-314 (505)
19 1wnd_A Putative betaine aldehy 100.0 7.6E-63 2.6E-67 453.7 32.0 283 2-288 39-322 (495)
20 3r31_A BADH, betaine aldehyde 100.0 3.4E-63 1.2E-67 457.9 29.5 279 2-288 31-313 (517)
21 2imp_A Lactaldehyde dehydrogen 100.0 6.9E-63 2.3E-67 453.6 31.4 283 2-288 23-306 (479)
22 3i44_A Aldehyde dehydrogenase; 100.0 1.1E-62 3.7E-67 452.9 32.1 282 2-288 42-324 (497)
23 2w8n_A Succinate-semialdehyde 100.0 4.3E-63 1.5E-67 455.2 28.8 283 2-288 27-313 (487)
24 4e4g_A Methylmalonate-semialde 100.0 1.1E-62 3.7E-67 454.9 30.7 282 2-288 43-326 (521)
25 1uzb_A 1-pyrroline-5-carboxyla 100.0 1.1E-62 3.9E-67 455.4 30.7 283 2-288 52-343 (516)
26 2ve5_A BADH, betaine aldehyde 100.0 1.9E-62 6.6E-67 452.0 32.0 283 2-287 23-306 (490)
27 3jz4_A Succinate-semialdehyde 100.0 1.2E-62 4E-67 452.3 30.2 283 2-288 26-309 (481)
28 3pqa_A Lactaldehyde dehydrogen 100.0 1.8E-62 6.2E-67 450.3 30.5 279 3-288 14-296 (486)
29 3etf_A Putative succinate-semi 100.0 3.6E-62 1.2E-66 447.5 31.2 282 2-288 8-289 (462)
30 1euh_A NADP dependent non phos 100.0 4.7E-62 1.6E-66 447.6 30.1 281 2-288 19-305 (475)
31 4dng_A Uncharacterized aldehyd 100.0 5.5E-62 1.9E-66 448.5 29.9 282 2-287 23-307 (485)
32 2j6l_A Aldehyde dehydrogenase 100.0 1.6E-61 5.5E-66 446.1 32.9 282 2-288 38-324 (500)
33 3ju8_A Succinylglutamic semial 100.0 2.6E-61 8.9E-66 444.0 32.1 282 2-288 21-304 (490)
34 3r64_A NAD dependent benzaldeh 100.0 1.9E-61 6.4E-66 446.4 30.9 282 2-287 29-314 (508)
35 1uxt_A Glyceraldehyde-3-phosph 100.0 1.8E-61 6E-66 445.6 30.0 281 2-288 33-318 (501)
36 3ty7_A Putative aldehyde dehyd 100.0 1.1E-61 3.9E-66 445.7 28.6 280 2-288 24-303 (478)
37 1t90_A MMSDH, probable methylm 100.0 2.3E-61 7.8E-66 444.0 30.1 280 2-287 22-303 (486)
38 3lns_A Benzaldehyde dehydrogen 100.0 1.6E-60 5.6E-65 435.5 32.3 281 2-288 7-291 (457)
39 1ez0_A ALDH, aldehyde dehydrog 100.0 1.8E-60 6.3E-65 440.3 29.0 283 2-288 8-311 (510)
40 4h7n_A Aldehyde dehydrogenase; 100.0 1.2E-60 4.2E-65 438.1 27.4 279 1-287 6-286 (474)
41 4f9i_A Proline dehydrogenase/d 100.0 1.1E-59 3.8E-64 459.7 30.3 284 2-288 546-836 (1026)
42 4e3x_A Delta-1-pyrroline-5-car 100.0 1.7E-59 5.9E-64 436.0 27.8 282 3-288 79-369 (563)
43 3v4c_A Aldehyde dehydrogenase 100.0 2.5E-59 8.4E-64 434.4 28.4 280 5-288 44-345 (528)
44 2y53_A Aldehyde dehydrogenase 100.0 6.2E-58 2.1E-62 425.6 25.2 279 2-288 23-320 (534)
45 3sza_A Aldehyde dehydrogenase, 100.0 4.1E-56 1.4E-60 406.8 31.9 264 19-288 14-281 (469)
46 3haz_A Proline dehydrogenase; 100.0 4E-56 1.4E-60 433.8 29.2 268 17-288 544-815 (1001)
47 2h5g_A Delta 1-pyrroline-5-car 100.0 4.6E-56 1.6E-60 405.5 18.6 267 4-281 10-294 (463)
48 3my7_A Alcohol dehydrogenase/a 100.0 6E-54 2E-58 391.6 26.4 262 17-288 1-267 (452)
49 3k9d_A LMO1179 protein, aldehy 100.0 3.3E-53 1.1E-57 387.9 23.2 264 15-288 4-272 (464)
50 4ghk_A Gamma-glutamyl phosphat 100.0 5.1E-52 1.7E-56 377.8 23.0 257 22-288 25-300 (444)
51 1o20_A Gamma-glutamyl phosphat 100.0 1.1E-51 3.8E-56 373.9 23.0 257 21-287 12-287 (427)
52 1vlu_A Gamma-glutamyl phosphat 100.0 4.8E-52 1.6E-56 379.5 20.0 253 24-287 15-289 (468)
53 4gic_A HDH, histidinol dehydro 94.1 2.8 9.7E-05 36.9 21.0 223 40-278 26-280 (423)
54 1kae_A HDH, histidinol dehydro 88.2 13 0.00045 32.8 17.1 178 86-278 87-274 (434)
55 3v42_A Folliculin; tumor suppr 64.3 9.7 0.00033 30.5 4.9 45 141-188 21-65 (226)
56 3v4g_A Arginine repressor; vib 63.8 21 0.00073 27.4 6.6 39 148-189 114-152 (180)
57 3fxd_A Protein ICMQ; helix bun 59.3 27 0.00091 21.1 6.3 47 20-72 5-51 (57)
58 1b93_A Protein (methylglyoxal 57.0 23 0.00077 26.5 5.5 114 125-264 12-135 (152)
59 2yvq_A Carbamoyl-phosphate syn 47.6 29 0.00099 25.4 4.9 62 170-233 60-131 (143)
60 2i2c_A Probable inorganic poly 43.2 43 0.0015 27.4 5.8 60 201-260 34-95 (272)
61 2xw6_A MGS, methylglyoxal synt 42.2 9.2 0.00032 28.0 1.3 86 136-232 16-110 (134)
62 1vmd_A MGS, methylglyoxal synt 41.3 1E+02 0.0035 23.6 7.1 118 121-264 23-151 (178)
63 3pzy_A MOG; ssgcid, seattle st 40.5 36 0.0012 25.6 4.5 51 165-216 28-80 (164)
64 2qv7_A Diacylglycerol kinase D 40.4 1.1E+02 0.0037 25.7 8.1 103 154-261 29-143 (337)
65 2zfz_A Arginine repressor; DNA 40.2 51 0.0017 21.4 4.6 36 150-189 20-55 (79)
66 2bon_A Lipid kinase; DAG kinas 39.2 1.7E+02 0.0058 24.5 10.6 103 154-260 34-146 (332)
67 1b4b_A Arginine repressor; cor 38.7 49 0.0017 21.0 4.3 56 150-222 12-67 (71)
68 1y5e_A Molybdenum cofactor bio 38.0 35 0.0012 25.7 4.1 52 164-215 31-85 (169)
69 1use_A VAsp, vasodilator-stimu 37.7 36 0.0012 19.5 3.0 27 50-76 14-40 (45)
70 3iwt_A 178AA long hypothetical 35.6 59 0.002 24.5 5.1 52 164-215 40-94 (178)
71 2p5m_A Arginine repressor; alp 35.5 49 0.0017 21.7 4.0 56 150-222 24-79 (83)
72 1xxa_A ARGR, arginine represso 35.3 42 0.0014 21.7 3.6 37 150-189 14-50 (78)
73 2ioj_A Hypothetical protein AF 34.4 27 0.00092 25.3 2.8 44 181-224 53-96 (139)
74 3rfq_A Pterin-4-alpha-carbinol 31.0 41 0.0014 25.9 3.4 53 164-216 49-103 (185)
75 3fgh_A Transcription factor A, 30.1 51 0.0018 20.2 3.3 36 31-68 29-64 (67)
76 1u0t_A Inorganic polyphosphate 28.3 1.7E+02 0.0057 24.3 7.1 60 201-261 74-134 (307)
77 3s40_A Diacylglycerol kinase; 27.1 2.6E+02 0.0089 22.9 9.8 103 154-259 13-124 (304)
78 3lap_A Arginine repressor; arg 27.0 2E+02 0.007 21.7 8.2 39 147-189 108-146 (170)
79 1wu2_A MOEA protein, molybdopt 25.7 15 0.00053 32.1 0.2 53 165-217 212-265 (396)
80 2eqz_A High mobility group pro 23.6 71 0.0024 20.8 3.2 36 31-68 48-83 (86)
81 1v63_A Nucleolar transcription 23.1 99 0.0034 20.9 4.0 39 31-71 37-75 (101)
82 3u3x_A Oxidoreductase; structu 22.6 3.4E+02 0.012 22.7 10.6 41 194-235 80-120 (361)
83 1b4a_A Arginine repressor; hel 22.2 1.1E+02 0.0037 22.6 4.2 56 150-222 90-145 (149)
84 2co9_A Thymus high mobility gr 21.8 1.4E+02 0.0047 20.1 4.5 37 33-71 50-86 (102)
85 2ixa_A Alpha-N-acetylgalactosa 21.8 3.9E+02 0.013 23.1 10.9 99 127-234 23-122 (444)
86 3ufx_B Succinyl-COA synthetase 21.8 3.9E+02 0.013 23.1 9.8 94 166-259 260-374 (397)
87 2pjk_A 178AA long hypothetical 21.4 72 0.0024 24.2 3.2 54 163-216 39-95 (178)
88 3kbq_A Protein TA0487; structu 20.5 66 0.0023 24.4 2.8 53 164-216 23-76 (172)
89 1mkz_A Molybdenum cofactor bio 20.5 65 0.0022 24.3 2.8 49 165-213 29-80 (172)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=4.4e-67 Score=480.54 Aligned_cols=286 Identities=42% Similarity=0.714 Sum_probs=272.7
Q ss_pred CceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchh
Q 047489 1 KTFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHS 80 (288)
Q Consensus 1 ~~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~ 80 (288)
++++++||.||+++++++.++.+|+++|++.|++||. .|+.++..+|.++|+++++.|++++++|+++++.|+|||..
T Consensus 22 ~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 99 (490)
T 2wme_A 22 ATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLA 99 (490)
T ss_dssp CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred CEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 3688999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHhhccHHHHHHHHHHHHHhhhhhcCccccccCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCC
Q 047489 81 WAKAVDVPAVAENVRYFAGAADKIHGEVLKMSRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAE 160 (288)
Q Consensus 81 ~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~ 160 (288)
+++..|+..+++.++||+.+.++..+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 100 ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse 179 (490)
T 2wme_A 100 ETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 179 (490)
T ss_dssp HHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCc
Confidence 99876799999999999999988877777766677789999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCCCce
Q 047489 161 QTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGKSPL 240 (288)
Q Consensus 161 ~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~~~~ 240 (288)
.+|.++..+++++.++|+|+|++|++++++.+.++.|..||+++.|.||||+.+|+.+.+..+.+++||+++|+|||||+
T Consensus 180 ~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~v~lELGGk~p~ 259 (490)
T 2wme_A 180 VTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPL 259 (490)
T ss_dssp TSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEE
T ss_pred CCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhccCCceEEEEcCCcCeE
Confidence 99999999999999999999999999998889999999999999999999999999987755554789999999999999
Q ss_pred eecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 241 LIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 241 iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 260 iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~ 307 (490)
T 2wme_A 260 IIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVL 307 (490)
T ss_dssp EECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHH
T ss_pred EEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999873
No 2
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=4e-64 Score=462.96 Aligned_cols=283 Identities=32% Similarity=0.553 Sum_probs=270.2
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhH
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSW 81 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~ 81 (288)
+++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 28 ~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 105 (506)
T 3rh9_A 28 TFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR--LTNPWPIETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKE 105 (506)
T ss_dssp EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCC--SSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred EEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 578999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCccccccCCceeEEEe-ecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCC
Q 047489 82 AKAVDVPAVAENVRYFAGAADKIHGEVLKMSRELQAYTLR-EPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAE 160 (288)
Q Consensus 82 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~ 160 (288)
++. |+..+++.++|++..+++..+...+...+...++.+ +|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 106 a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~ 184 (506)
T 3rh9_A 106 AQG-EVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPAS 184 (506)
T ss_dssp HHH-HHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCT
T ss_pred HHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCC
Confidence 984 999999999999999988876655544456678888 999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCCCce
Q 047489 161 QTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGKSPL 240 (288)
Q Consensus 161 ~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~~~~ 240 (288)
.+|.++..+++++.++|+|+|+++++++++.+.++.|+.||++|.|.||||+.+|+.|.+.++. +++|+++|+|||||+
T Consensus 185 ~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~-~l~~v~lElGGk~p~ 263 (506)
T 3rh9_A 185 ETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAE-QVKKLALELGGNAPF 263 (506)
T ss_dssp TSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTT-TTCEEEEECCCCCEE
T ss_pred ccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhh-cCCceEEecCCCCce
Confidence 9999999999999999999999999999777899999999999999999999999999999987 889999999999999
Q ss_pred eecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 241 LIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 241 iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 264 iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 311 (506)
T 3rh9_A 264 IVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLA 311 (506)
T ss_dssp EECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999873
No 3
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=5.2e-64 Score=463.64 Aligned_cols=283 Identities=39% Similarity=0.682 Sum_probs=269.8
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhc--ccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCch
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAF--DHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLH 79 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~--~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~ 79 (288)
+++++||.||+++++++.++.+|++++++.|++|| . .|+.++..+|.++|+++++.|+++.++|+++++.|+|||.
T Consensus 49 ~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 126 (520)
T 3ed6_A 49 TRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG--EWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTL 126 (520)
T ss_dssp EEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHT--TTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH
T ss_pred EEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence 57899999999999999999999999999999999 8 9999999999999999999999999999999999999999
Q ss_pred hHHhhccHHHHHHHHHHHHHhhhhhcCcccccc-CCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeC
Q 047489 80 SWAKAVDVPAVAENVRYFAGAADKIHGEVLKMS-RELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKP 158 (288)
Q Consensus 80 ~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkp 158 (288)
.+++. |+..+++.++|++...++..+...+.. .+...++.++|+|||++|+|||||+...++.+++||++||+||+||
T Consensus 127 ~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKP 205 (520)
T 3ed6_A 127 EESYA-DMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKP 205 (520)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEc
Confidence 99986 999999999999999888766544433 4566789999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCCC
Q 047489 159 AEQTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGKS 238 (288)
Q Consensus 159 s~~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~~ 238 (288)
|+.+|.++..+++++.++|+|+|+++++++++.+.++.|..||++|.|.||||+.+|+.|.+.++. +++|+++|+||||
T Consensus 206 s~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa~-~l~~v~lELGGk~ 284 (520)
T 3ed6_A 206 SEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAAN-NVTNIALELGGKN 284 (520)
T ss_dssp CTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCC
T ss_pred CCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhh-cCCCEEEEcCCCC
Confidence 999999999999999999999999999999778899999999999999999999999999999988 7899999999999
Q ss_pred ceeecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 239 PLLIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 239 ~~iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
|+||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 285 p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 334 (520)
T 3ed6_A 285 PNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALI 334 (520)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHH
T ss_pred eeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999873
No 4
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=5e-64 Score=463.43 Aligned_cols=286 Identities=41% Similarity=0.755 Sum_probs=268.7
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhH
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSW 81 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~ 81 (288)
+++++||.||+++++++.++.+|++++++.|++||..|.|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 53 ~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 132 (517)
T 2o2p_A 53 TYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTL 132 (517)
T ss_dssp EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred eEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Confidence 47899999999999999999999999999999999855699999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCccccc----cCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEe
Q 047489 82 AKAVDVPAVAENVRYFAGAADKIHGEVLKM----SRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVK 157 (288)
Q Consensus 82 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilk 157 (288)
+...|+..+++.++|++.++++..+...+. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 133 a~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlK 212 (517)
T 2o2p_A 133 ALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIK 212 (517)
T ss_dssp HHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEE
Confidence 874599999999999999988876654443 2233568999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhh-cCCCcceEEeCCC
Q 047489 158 PAEQTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAAS-TSNLKPVSLEFGG 236 (288)
Q Consensus 158 ps~~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~-~~~~~~~~~e~gg 236 (288)
||+.+|.++..+++++.++|+|+|+++++++++.+.++.|..|++++.|.||||+.+|+.|.+.++ . +++|+++|+||
T Consensus 213 ps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~aa~~-~lk~v~lELGG 291 (517)
T 2o2p_A 213 PAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALS-NVKKVSLELGG 291 (517)
T ss_dssp CCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHH-TCCEEEEECCC
T ss_pred CCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhHHh-cCCeEEEECCC
Confidence 999999999999999999999999999999977788999999999999999999999999999988 6 78999999999
Q ss_pred CCceeecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 237 KSPLLIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 237 ~~~~iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
|||+||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 292 k~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~ 343 (517)
T 2o2p_A 292 KSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVV 343 (517)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHH
T ss_pred cCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999873
No 5
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=3.9e-64 Score=461.44 Aligned_cols=283 Identities=35% Similarity=0.636 Sum_probs=268.8
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhH
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSW 81 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~ 81 (288)
+++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 29 ~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 106 (484)
T 3ifg_A 29 TFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA--GWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAE 106 (484)
T ss_dssp EEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred EEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 578999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCcccccc-CCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCC
Q 047489 82 AKAVDVPAVAENVRYFAGAADKIHGEVLKMS-RELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAE 160 (288)
Q Consensus 82 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~ 160 (288)
++. |+..+++.++|++...++..+...+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 107 a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~ 185 (484)
T 3ifg_A 107 AKG-EIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAE 185 (484)
T ss_dssp HHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCT
T ss_pred HHH-HHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHHHHHcCCEEEEECCC
Confidence 986 999999999999998877665544432 356678999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCCCce
Q 047489 161 QTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGKSPL 240 (288)
Q Consensus 161 ~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~~~~ 240 (288)
.+|.++..+++++.++|+|+|+++++++++.+.++.|..||+++.|.||||+.+|+.|.+.++. +++|+++|+|||||+
T Consensus 186 ~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~-~~k~v~lElGGk~p~ 264 (484)
T 3ifg_A 186 STPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAP-TVKKLTLELGGNAPF 264 (484)
T ss_dssp TSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGG-GTCEEEEECCCCCEE
T ss_pred CCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhc-cCCceEEecCCCCeE
Confidence 9999999999999999999999999998777899999999999999999999999999999987 789999999999999
Q ss_pred eecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 241 LIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 241 iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 265 iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 312 (484)
T 3ifg_A 265 IVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLA 312 (484)
T ss_dssp EECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999873
No 6
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=6.5e-64 Score=461.45 Aligned_cols=286 Identities=49% Similarity=0.850 Sum_probs=269.4
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccC-CCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchh
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHG-PWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHS 80 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~-~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~ 80 (288)
+++++||.||+++++++.++.+|++++++.|++||..| .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..
T Consensus 37 ~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 116 (501)
T 1bxs_A 37 KFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFS 116 (501)
T ss_dssp EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHH
T ss_pred eEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 47899999999999999999999999999999999843 59999999999999999999999999999999999999999
Q ss_pred HHhhccHHHHHHHHHHHHHhhhhhcCccccccCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCC
Q 047489 81 WAKAVDVPAVAENVRYFAGAADKIHGEVLKMSRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAE 160 (288)
Q Consensus 81 ~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~ 160 (288)
++...|+..+++.++|++..+++..+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 117 e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~ 196 (501)
T 1bxs_A 117 NAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAE 196 (501)
T ss_dssp HHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCC
Confidence 87666999999999999999888766544433455668999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhh-cCCCcceEEeCCCCCc
Q 047489 161 QTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAAS-TSNLKPVSLEFGGKSP 239 (288)
Q Consensus 161 ~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~-~~~~~~~~~e~gg~~~ 239 (288)
.+|.++..+++++.++|+|+|+++++++++.+.++.|..|+++|.|.||||+.+|+.|.+.++ . +++|+++|+|||||
T Consensus 197 ~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~-~l~~v~lELGGk~p 275 (501)
T 1bxs_A 197 QTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKS-NLKRVSLELGGKSP 275 (501)
T ss_dssp TCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCCCCE
T ss_pred ccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhc-cCCcEEEecCCcCe
Confidence 999999999999999999999999999977788999999999999999999999999999988 6 88999999999999
Q ss_pred eeecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 240 LLIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 240 ~iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
+||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 276 ~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 324 (501)
T 1bxs_A 276 CIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSV 324 (501)
T ss_dssp EEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999873
No 7
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=3.6e-64 Score=461.33 Aligned_cols=283 Identities=27% Similarity=0.422 Sum_probs=269.6
Q ss_pred CceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchh
Q 047489 1 KTFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHS 80 (288)
Q Consensus 1 ~~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~ 80 (288)
++++++||.||+++++++.++.++++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..
T Consensus 4 ~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 81 (484)
T 3ros_A 4 SKYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYK--KWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLS 81 (484)
T ss_dssp CCCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred CccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 3578999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHhhccHHHHHHHHHHHHHhhhhhcCccccccCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCC
Q 047489 81 WAKAVDVPAVAENVRYFAGAADKIHGEVLKMSRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAE 160 (288)
Q Consensus 81 ~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~ 160 (288)
+++. |+..+++.++|++..+++..+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 82 ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~ 160 (484)
T 3ros_A 82 ESKE-EVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAH 160 (484)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCT
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 9985 999999999999999988877655544566789999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCCCce
Q 047489 161 QTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGKSPL 240 (288)
Q Consensus 161 ~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~~~~ 240 (288)
.+|.++..+++++.++|+|+|+++++++++.+.++ |+.||++|.|.||||+.+|+.|.+.++. +++|+++|+|||||+
T Consensus 161 ~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~ 238 (484)
T 3ros_A 161 NVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAF 238 (484)
T ss_dssp TCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCCEE
T ss_pred CChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhc-cCCceEeecCCCCcc
Confidence 99999999999999999999999999997666777 9999999999999999999999999998 889999999999999
Q ss_pred eecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 241 LIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 241 iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 239 iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 286 (484)
T 3ros_A 239 IVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELK 286 (484)
T ss_dssp EECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHH
T ss_pred eeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999873
No 8
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1e-63 Score=459.79 Aligned_cols=285 Identities=37% Similarity=0.604 Sum_probs=269.6
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhH
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSW 81 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~ 81 (288)
+++++||.||+++++++.++.+|++++++.|++||..|.|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 25 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 104 (495)
T 3b4w_A 25 VIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTI 104 (495)
T ss_dssp EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred eEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 47899999999999999999999999999999999855699999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCccccccCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCCC
Q 047489 82 AKAVDVPAVAENVRYFAGAADKIHGEVLKMSRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAEQ 161 (288)
Q Consensus 82 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~~ 161 (288)
+...|+..+++.++|++..+++..+...+.+.+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 105 a~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~ 184 (495)
T 3b4w_A 105 IETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAE 184 (495)
T ss_dssp HHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCc
Confidence 87459999999999999988887765544433446689999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCCCcee
Q 047489 162 TPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGKSPLL 241 (288)
Q Consensus 162 ~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~~~~i 241 (288)
+|.++..+++++.++|+|+|+++++++ +.+.++.|+.|+++|.|.||||+.+|+.|.+.++. +++|+++|+|||||+|
T Consensus 185 tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~-~l~pv~lELGGk~p~i 262 (495)
T 3b4w_A 185 TPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAE-MLKPCTLELGGKSAAI 262 (495)
T ss_dssp SCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHH-TTCCEEEECCCCEEEE
T ss_pred cHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhh-cCCceeecCCCcceEE
Confidence 999999999999999999999999999 88899999999999999999999999999999987 7899999999999999
Q ss_pred ecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 242 IFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 242 v~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
|++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 263 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 309 (495)
T 3b4w_A 263 ILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVT 309 (495)
T ss_dssp ECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999873
No 9
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=2e-63 Score=458.74 Aligned_cols=281 Identities=35% Similarity=0.645 Sum_probs=266.9
Q ss_pred eecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhHH
Q 047489 3 FETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSWA 82 (288)
Q Consensus 3 ~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~a 82 (288)
++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..++
T Consensus 38 ~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea 115 (503)
T 1a4s_A 38 EPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEA 115 (503)
T ss_dssp EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH
T ss_pred EEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence 78999999999999999999999999999999999 9999999999999999999999999999999999999999998
Q ss_pred hhccHHHHHHHHHHHHHhhhhhcCccccccCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCCCC
Q 047489 83 KAVDVPAVAENVRYFAGAADKIHGEVLKMSRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAEQT 162 (288)
Q Consensus 83 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~~~ 162 (288)
.. |+..+++.++|++..+++..+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 116 ~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~t 194 (503)
T 1a4s_A 116 EY-DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMT 194 (503)
T ss_dssp HH-HHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTS
T ss_pred HH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCC
Confidence 75 99999999999999988876544333334466899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCCCceee
Q 047489 163 PLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGKSPLLI 242 (288)
Q Consensus 163 ~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~~~~iv 242 (288)
|.++..+++++.++|+|+|+++++++++ +.++.|..||++|.|.||||+.+|+.|.+.++. +++|+++|+|||||+||
T Consensus 195 p~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~-~~~~v~lELGGk~p~IV 272 (503)
T 1a4s_A 195 PVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAK-TVKHVTLELGGKSPLLI 272 (503)
T ss_dssp CHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCCEEEE
T ss_pred hHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhh-cCCceEEecCCcCeEEE
Confidence 9999999999999999999999999977 889999999999999999999999999999987 88999999999999999
Q ss_pred cCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 243 FDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 243 ~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 273 ~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 318 (503)
T 1a4s_A 273 FKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVV 318 (503)
T ss_dssp CTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999873
No 10
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.7e-63 Score=460.98 Aligned_cols=283 Identities=41% Similarity=0.676 Sum_probs=269.5
Q ss_pred ceecccCCC-CceeEEEcCCCHHHHHHHHHHHHhhc--ccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCc
Q 047489 2 TFETIDPRT-GEAIARIAEGDKEDIDNAVKAARHAF--DHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKL 78 (288)
Q Consensus 2 ~~~~~~p~~-g~~~~~~~~~~~~~~~~a~~~a~~a~--~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~ 78 (288)
+++++||.| |+++++++.++.++++++++.|++|| . .|+.++..+|.++|+++++.|+++.++|+++++.|+|||
T Consensus 39 ~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 116 (528)
T 3u4j_A 39 TIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAG--PWPRMSGAERSRLMFKVADLILARQEELALIESLEVGKP 116 (528)
T ss_dssp EEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTS--SGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred EEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 578999999 99999999999999999999999999 7 899999999999999999999999999999999999999
Q ss_pred hhHHhhccHHHHHHHHHHHHHhhhhhcCcccccc-CCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEe
Q 047489 79 HSWAKAVDVPAVAENVRYFAGAADKIHGEVLKMS-RELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVK 157 (288)
Q Consensus 79 ~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilk 157 (288)
..++. .|+..+++.++|++..+++..+...+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 117 ~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlK 195 (528)
T 3u4j_A 117 IAQAR-GEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLK 195 (528)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEE
Confidence 99995 5999999999999999888765554443 456678999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCC
Q 047489 158 PAEQTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGK 237 (288)
Q Consensus 158 ps~~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~ 237 (288)
||+.+|.++..+++++.++|+|+|+++++++++.+.++.|+.||++|.|.||||+.+|+.|.+.++. +++|+++|+|||
T Consensus 196 ps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~-~lk~v~lELGGk 274 (528)
T 3u4j_A 196 PSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAAR-TVKRVGLELGGK 274 (528)
T ss_dssp CCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCC
T ss_pred cCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHHh-cCCceEEecCCC
Confidence 9999999999999999999999999999999888899999999999999999999999999999987 889999999999
Q ss_pred CceeecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 238 SPLLIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 238 ~~~iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
||+||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 275 ~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 325 (528)
T 3u4j_A 275 GPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLL 325 (528)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHH
T ss_pred CeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999873
No 11
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=6.3e-64 Score=461.47 Aligned_cols=283 Identities=35% Similarity=0.634 Sum_probs=268.9
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhH
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSW 81 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~ 81 (288)
+++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 49 ~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 126 (504)
T 3ek1_A 49 TIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAE 126 (504)
T ss_dssp EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred EEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 578999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCcccccc-CCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCC
Q 047489 82 AKAVDVPAVAENVRYFAGAADKIHGEVLKMS-RELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAE 160 (288)
Q Consensus 82 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~ 160 (288)
++. |+..+++.++|++.+.++..+...+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 127 a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~ 205 (504)
T 3ek1_A 127 ARG-EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPAD 205 (504)
T ss_dssp HHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCT
T ss_pred HHH-HHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCC
Confidence 886 999999999999998887665544432 346678999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCCCce
Q 047489 161 QTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGKSPL 240 (288)
Q Consensus 161 ~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~~~~ 240 (288)
.+|.++..+++++.++|+|+|+++++++++.+.++.|..||++|.|.||||+.+|+.|.+.++. +++|+++|+|||||+
T Consensus 206 ~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~ 284 (504)
T 3ek1_A 206 LTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAP-TIKRISLELGGNAPF 284 (504)
T ss_dssp TSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGG-GTCEEEEECCCCEEE
T ss_pred cChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhh-hcCCeEecCCCCCee
Confidence 9999999999999999999999999998778899999999999999999999999999999988 889999999999999
Q ss_pred eecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 241 LIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 241 iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 285 IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 332 (504)
T 3ek1_A 285 IVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLA 332 (504)
T ss_dssp EECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHH
T ss_pred EEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999873
No 12
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=4.3e-63 Score=459.20 Aligned_cols=283 Identities=28% Similarity=0.454 Sum_probs=268.0
Q ss_pred ceecccCCC-CceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchh
Q 047489 2 TFETIDPRT-GEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHS 80 (288)
Q Consensus 2 ~~~~~~p~~-g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~ 80 (288)
+++++||.| |+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..
T Consensus 52 ~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 129 (538)
T 3qan_A 52 KIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWK 129 (538)
T ss_dssp EEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHH
T ss_pred eEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 578999999 999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHhhccHHHHHHHHHHHHHh-hhhhcCccccccCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCC
Q 047489 81 WAKAVDVPAVAENVRYFAGA-ADKIHGEVLKMSRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPA 159 (288)
Q Consensus 81 ~a~~~ev~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps 159 (288)
+++. |+..+++.++|++.. .+...+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 130 ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps 208 (538)
T 3qan_A 130 EADA-DTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPA 208 (538)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 9987 999999999999998 45555544443346678899999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCC------CcceEEe
Q 047489 160 EQTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSN------LKPVSLE 233 (288)
Q Consensus 160 ~~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~------~~~~~~e 233 (288)
+.+|.++..+++++.++|+|+|+++++++++.+.++.|..||++|.|.||||+.+|+.|.+.++. + ++|+++|
T Consensus 209 ~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~-~~~~~~~lkpv~lE 287 (538)
T 3qan_A 209 STTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAV-VRPGQNHLKRVIVE 287 (538)
T ss_dssp TTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTS-CCTTCCSCCEEEEE
T ss_pred CccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhh-ccccccccccEEEe
Confidence 99999999999999999999999999999778899999999999999999999999999999987 5 8999999
Q ss_pred CCCCCceeecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 234 FGGKSPLLIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 234 ~gg~~~~iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
+|||||+||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 288 LGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 342 (538)
T 3qan_A 288 MGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTV 342 (538)
T ss_dssp CCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHH
T ss_pred cCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999873
No 13
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=2.1e-63 Score=458.39 Aligned_cols=282 Identities=34% Similarity=0.581 Sum_probs=269.2
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhH
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSW 81 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~ 81 (288)
+++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 29 ~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~ 106 (497)
T 3k2w_A 29 TIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK--AWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSV 106 (497)
T ss_dssp EEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHH
T ss_pred EEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 578999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCccccc-cCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCC
Q 047489 82 AKAVDVPAVAENVRYFAGAADKIHGEVLKM-SRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAE 160 (288)
Q Consensus 82 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~ 160 (288)
++. |+..+++.++|++..+++..+...+. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 107 a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~ 185 (497)
T 3k2w_A 107 AEM-EVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQ 185 (497)
T ss_dssp HHH-HHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred HHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 985 99999999999999988876654443 2456678999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCCCce
Q 047489 161 QTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGKSPL 240 (288)
Q Consensus 161 ~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~~~~ 240 (288)
.+|.++..+++++.++|+|+|+++++++++.+.++.|+.||++|.|.||||+.+|+.|.+.++. +++|+++|+|||||+
T Consensus 186 ~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~-~l~pv~lElGGk~p~ 264 (497)
T 3k2w_A 186 ETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAE-YMTPVMLELGGKAPM 264 (497)
T ss_dssp SSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTT-TTCCEEEECCCCEEE
T ss_pred CChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhh-cCCCeEEEcCCCCce
Confidence 9999999999999999999999999999778899999999999999999999999999999988 789999999999999
Q ss_pred eecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhh
Q 047489 241 LIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAA 287 (288)
Q Consensus 241 iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l 287 (288)
||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|
T Consensus 265 iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 311 (497)
T 3k2w_A 265 VVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKF 311 (497)
T ss_dssp EECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHH
T ss_pred EEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999987
No 14
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=4.4e-63 Score=456.77 Aligned_cols=285 Identities=41% Similarity=0.691 Sum_probs=267.9
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccC---CCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCc
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHG---PWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKL 78 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~---~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~ 78 (288)
+++++||.||+++++++.++.+|++++++.|++||..| .|+.++..+|.++|+++++.|+++.++|+++++.|+|||
T Consensus 24 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 103 (503)
T 3iwj_A 24 RIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKP 103 (503)
T ss_dssp EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred eEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 57899999999999999999999999999999999743 699999999999999999999999999999999999999
Q ss_pred hhHHhhccHHHHHHHHHHHHHhhhhhcCccc-cc---cCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeE
Q 047489 79 HSWAKAVDVPAVAENVRYFAGAADKIHGEVL-KM---SRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTM 154 (288)
Q Consensus 79 ~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~v 154 (288)
..++.. |+..+++.++|++.+.++..+... +. ..+...++.++|+|||++|+|||||+...++++++||++||+|
T Consensus 104 ~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~V 182 (503)
T 3iwj_A 104 LDEAAW-DIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAA 182 (503)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeE
Confidence 999976 999999999999998887655432 11 1345678999999999999999999999999999999999999
Q ss_pred EEeCCCCChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeC
Q 047489 155 VVKPAEQTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEF 234 (288)
Q Consensus 155 ilkps~~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~ 234 (288)
|+|||+.+|.++..+++++.++|+|+|+++++++++.+.++.|..|+++|.|.||||+.+|+.|.+.++. +++|+++|+
T Consensus 183 VlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~-~l~~v~lEl 261 (503)
T 3iwj_A 183 ILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQ-LVKPVSLEL 261 (503)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHHHHHHGG-GTCCEEEEC
T ss_pred EEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHHHHHHhc-CCCCEEEEC
Confidence 9999999999999999999999999999999999777889999999999999999999999999999988 889999999
Q ss_pred CCCCceeecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 235 GGKSPLLIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 235 gg~~~~iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
|||||+||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 262 GGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 315 (503)
T 3iwj_A 262 GGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIV 315 (503)
T ss_dssp CCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHH
T ss_pred CCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999873
No 15
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=3.4e-63 Score=456.35 Aligned_cols=283 Identities=37% Similarity=0.622 Sum_probs=268.2
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhH
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSW 81 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~ 81 (288)
+++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 41 ~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 118 (498)
T 4f3x_A 41 EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINA 118 (498)
T ss_dssp EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 478999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCccccc-cCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCC
Q 047489 82 AKAVDVPAVAENVRYFAGAADKIHGEVLKM-SRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAE 160 (288)
Q Consensus 82 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~ 160 (288)
+...|+..+++.++|++..+++..+...+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 119 a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~ 198 (498)
T 4f3x_A 119 VKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSE 198 (498)
T ss_dssp HHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCc
Confidence 934599999999999999988766554432 2456678999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCCCce
Q 047489 161 QTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGKSPL 240 (288)
Q Consensus 161 ~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~~~~ 240 (288)
.+|.++..+++++.++ +|+|+++++++++.+.++.|+.||++|.|.||||+.+|+.|.+.++. +++|+++|+|||||+
T Consensus 199 ~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~-~~k~v~lElGGk~p~ 276 (498)
T 4f3x_A 199 QTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAK-TVKRTHLELGGKAPV 276 (498)
T ss_dssp TCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCEEE
T ss_pred ccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHh-hCCceeecCCCCCcE
Confidence 9999999999999999 99999999999888899999999999999999999999999999988 889999999999999
Q ss_pred eecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 241 LIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 241 iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 277 IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 324 (498)
T 4f3x_A 277 IVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLT 324 (498)
T ss_dssp EECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999873
No 16
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=1.9e-63 Score=458.29 Aligned_cols=286 Identities=50% Similarity=0.830 Sum_probs=268.7
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccC-CCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchh
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHG-PWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHS 80 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~-~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~ 80 (288)
+++++||.||+++++++.++.+|++++++.|++||..| .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..
T Consensus 36 ~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 115 (500)
T 1o04_A 36 TFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYV 115 (500)
T ss_dssp EEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred eEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 47899999999999999999999999999999999731 49999999999999999999999999999999999999999
Q ss_pred HHhhccHHHHHHHHHHHHHhhhhhcCccccccCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCC
Q 047489 81 WAKAVDVPAVAENVRYFAGAADKIHGEVLKMSRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAE 160 (288)
Q Consensus 81 ~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~ 160 (288)
++...|+..+++.++|++..+++..+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 116 ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~ 195 (500)
T 1o04_A 116 ISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAE 195 (500)
T ss_dssp HHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCc
Confidence 87666999999999999998887766544433445668999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhh-cCCCcceEEeCCCCCc
Q 047489 161 QTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAAS-TSNLKPVSLEFGGKSP 239 (288)
Q Consensus 161 ~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~-~~~~~~~~~e~gg~~~ 239 (288)
.+|.++..+++++.++|+|+|+++++++++.+.++.|..||++|.|.||||+.+|+.|.+.++ . +++|+++|+|||||
T Consensus 196 ~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~-~l~pv~lELGGk~p 274 (500)
T 1o04_A 196 QTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSS-NLKRVTLELGGKSP 274 (500)
T ss_dssp TSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCCCEE
T ss_pred cChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhh-cCceEEEEcCCcCe
Confidence 999999999999999999999999999877789999999999999999999999999999998 6 88999999999999
Q ss_pred eeecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 240 LLIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 240 ~iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
+||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 275 ~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 323 (500)
T 1o04_A 275 NIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSV 323 (500)
T ss_dssp EEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999873
No 17
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=2.2e-63 Score=459.65 Aligned_cols=283 Identities=39% Similarity=0.647 Sum_probs=268.7
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhH
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSW 81 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~ 81 (288)
+++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 43 ~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 120 (515)
T 2d4e_A 43 TFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRI 120 (515)
T ss_dssp EEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred eEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 478999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCccccc-cCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCC
Q 047489 82 AKAVDVPAVAENVRYFAGAADKIHGEVLKM-SRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAE 160 (288)
Q Consensus 82 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~ 160 (288)
++ .|+..+++.++|++.++++..+...+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 121 a~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~ 199 (515)
T 2d4e_A 121 VR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAE 199 (515)
T ss_dssp HH-HHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHHHHTTCCEEEECCT
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhhHHHHcCCeeeecCCC
Confidence 98 599999999999999888876654443 2345678999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCCCce
Q 047489 161 QTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGKSPL 240 (288)
Q Consensus 161 ~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~~~~ 240 (288)
.+|.++..+++++.++|+|+|+++++++++.+.++.|..|+++|.|.||||+.+|+.|.+.++. +++|+++|+|||||+
T Consensus 200 ~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~-~l~~v~lELGGk~p~ 278 (515)
T 2d4e_A 200 WSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAAD-HLKRLSPELGGKSPA 278 (515)
T ss_dssp TSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGG-GTCEEEEECCCCCEE
T ss_pred CcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhh-cCCceEecCCCcCeE
Confidence 9999999999999999999999999999777889999999999999999999999999999998 889999999999999
Q ss_pred eecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 241 LIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 241 iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 279 iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 326 (515)
T 2d4e_A 279 LVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVV 326 (515)
T ss_dssp EECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHH
T ss_pred EEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999873
No 18
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=4.2e-63 Score=456.47 Aligned_cols=281 Identities=31% Similarity=0.496 Sum_probs=265.9
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhH
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSW 81 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~ 81 (288)
+++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 28 ~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 105 (505)
T 3prl_A 28 RISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK--IWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKS 105 (505)
T ss_dssp EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHH
T ss_pred EEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 578999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCcccccc--C----CceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEE
Q 047489 82 AKAVDVPAVAENVRYFAGAADKIHGEVLKMS--R----ELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMV 155 (288)
Q Consensus 82 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vi 155 (288)
++. |+..+++.++|++...++..+...+.. . +...++.++|+|||++|+|||||+...++++++||++||+||
T Consensus 106 a~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VV 184 (505)
T 3prl_A 106 AIG-EVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVV 184 (505)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEE
T ss_pred HHH-HHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEE
Confidence 986 999999999999999887665544322 1 345688999999999999999999999999999999999999
Q ss_pred EeCCCCChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCC
Q 047489 156 VKPAEQTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFG 235 (288)
Q Consensus 156 lkps~~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~g 235 (288)
+|||+.+|.++..+++++.++|+|+|+++++++++.+.++.|..||++|.|.||||+.+|+.|.+.++ ++|+++|+|
T Consensus 185 lKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa---l~~v~lELG 261 (505)
T 3prl_A 185 FKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK---MIPVVLELG 261 (505)
T ss_dssp EEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHCC---SSCEEEECC
T ss_pred EECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHcc---CCcEEEECC
Confidence 99999999999999999999999999999999977888999999999999999999999999998876 699999999
Q ss_pred CCCceeecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 236 GKSPLLIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 236 g~~~~iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
||||+||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 262 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 314 (505)
T 3prl_A 262 GKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIK 314 (505)
T ss_dssp CCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHH
T ss_pred CCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999873
No 19
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=7.6e-63 Score=453.72 Aligned_cols=283 Identities=36% Similarity=0.581 Sum_probs=267.2
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhH
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSW 81 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~ 81 (288)
+++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 39 ~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 116 (495)
T 1wnd_A 39 KQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHS 116 (495)
T ss_dssp EEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred eEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 578999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCcccccc-CCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCC
Q 047489 82 AKAVDVPAVAENVRYFAGAADKIHGEVLKMS-RELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAE 160 (288)
Q Consensus 82 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~ 160 (288)
+...|+..+++.++|++..+++..+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 117 a~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~ 196 (495)
T 1wnd_A 117 AFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSE 196 (495)
T ss_dssp HHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCC
Confidence 8755899999999999998887765544432 344568899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCCCce
Q 047489 161 QTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGKSPL 240 (288)
Q Consensus 161 ~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~~~~ 240 (288)
.+|.++..+++++.++ +|+|+++++++++.+.++.|+.||++|.|.||||+.+|+.|.+.+++ +++|+++|+|||||+
T Consensus 197 ~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~-~l~~v~lELGGk~p~ 274 (495)
T 1wnd_A 197 ITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAS-SIKRTHMELGGKAPV 274 (495)
T ss_dssp TCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGG-GTCEEEEECCCCCEE
T ss_pred CChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHh-cCCccccccCCCCeE
Confidence 9999999999999999 99999999999777889999999999999999999999999999988 789999999999999
Q ss_pred eecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 241 LIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 241 iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 275 iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 322 (495)
T 1wnd_A 275 IVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLG 322 (495)
T ss_dssp EECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHH
T ss_pred EECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999873
No 20
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3.4e-63 Score=457.89 Aligned_cols=279 Identities=38% Similarity=0.626 Sum_probs=266.2
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhH
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSW 81 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~ 81 (288)
+++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 31 ~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 108 (517)
T 3r31_A 31 PFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK--EWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQE 108 (517)
T ss_dssp EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred EEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 578999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHHhhhh----hcCccccccCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEe
Q 047489 82 AKAVDVPAVAENVRYFAGAADK----IHGEVLKMSRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVK 157 (288)
Q Consensus 82 a~~~ev~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilk 157 (288)
+ |+..+++.++|++.+.++ ..+...+...+. .+..++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 109 a---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlK 184 (517)
T 3r31_A 109 T---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFK 184 (517)
T ss_dssp H---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEE
T ss_pred H---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEE
Confidence 7 899999999999998887 555554443445 88999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCC
Q 047489 158 PAEQTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGK 237 (288)
Q Consensus 158 ps~~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~ 237 (288)
||+.+|.++..+++++.++|+|+|+++++++ +.+.++.|+.||++|.|.||||+.+|+.|.+.++. +++|+++|+|||
T Consensus 185 ps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~-~lk~v~lElGGk 262 (517)
T 3r31_A 185 PSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAG-HLKHVTMELGGK 262 (517)
T ss_dssp CCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCC
T ss_pred cCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHhhc-CCCcEEEEcCCc
Confidence 9999999999999999999999999999999 88899999999999999999999999999999998 789999999999
Q ss_pred CceeecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 238 SPLLIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 238 ~~~iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
||+||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 263 ~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 313 (517)
T 3r31_A 263 SPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLK 313 (517)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHH
T ss_pred CeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999873
No 21
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=6.9e-63 Score=453.60 Aligned_cols=283 Identities=31% Similarity=0.555 Sum_probs=267.5
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhH
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSW 81 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~ 81 (288)
+++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 23 ~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 100 (479)
T 2imp_A 23 WIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP--EWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQL 100 (479)
T ss_dssp EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred eEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 478999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCcccccc-CCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCC
Q 047489 82 AKAVDVPAVAENVRYFAGAADKIHGEVLKMS-RELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAE 160 (288)
Q Consensus 82 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~ 160 (288)
++. |+..+++.++|++..+++..+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 101 a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~ 179 (479)
T 2imp_A 101 AEV-EVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSE 179 (479)
T ss_dssp HHH-HHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHH-HHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCc
Confidence 875 999999999999998877666543322 244678999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCCCce
Q 047489 161 QTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGKSPL 240 (288)
Q Consensus 161 ~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~~~~ 240 (288)
.+|.++..+++++.++|+|+|+++++++++.+.++.|..|+++|.|.||||+.+|+.|.+.++. +++|+++|+|||||+
T Consensus 180 ~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~p~ 258 (479)
T 2imp_A 180 FTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK-NITKVCLELGGKAPA 258 (479)
T ss_dssp TSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCCEE
T ss_pred cchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhc-cCCcEEEEcCCcCeE
Confidence 9999999999999999999999999999666789999999999999999999999999999987 889999999999999
Q ss_pred eecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 241 LIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 241 iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 259 iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~ 306 (479)
T 2imp_A 259 IVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLG 306 (479)
T ss_dssp EECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999873
No 22
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=1.1e-62 Score=452.93 Aligned_cols=282 Identities=34% Similarity=0.521 Sum_probs=264.2
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhH
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSW 81 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~ 81 (288)
+++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 42 ~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 119 (497)
T 3i44_A 42 DLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDM 119 (497)
T ss_dssp EEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred eEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 578999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCccccccCCceeEEE-eecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCC
Q 047489 82 AKAVDVPAVAENVRYFAGAADKIHGEVLKMSRELQAYTL-REPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAE 160 (288)
Q Consensus 82 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~ 160 (288)
++..|+..+++.+++++............ ..+...++. ++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 120 a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~ 198 (497)
T 3i44_A 120 ALNAQTATGSSHIRNFIKAYKEFSFQEAL-IEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSE 198 (497)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHCCSEEES-STTCSSCEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccccccc-cCCceeEEEeecCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCc
Confidence 98459999999999999877654332211 113445677 9999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCCCce
Q 047489 161 QTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGKSPL 240 (288)
Q Consensus 161 ~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~~~~ 240 (288)
.+|.++..+++++.++|+|+|++|++++++.+.++.|..||++|.|.||||+.+|+.|.+.++. +++|+++|+|||||+
T Consensus 199 ~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~-~~k~v~lElGGk~p~ 277 (497)
T 3i44_A 199 IAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASN-TLKRVCLELGGKGAN 277 (497)
T ss_dssp TSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCCEE
T ss_pred ccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhh-cCCceeeccCCCCce
Confidence 9999999999999999999999999999888899999999999999999999999999999987 889999999999999
Q ss_pred eecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 241 LIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 241 iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
||++||| |.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 278 IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 324 (497)
T 3i44_A 278 IIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAK 324 (497)
T ss_dssp EECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHH
T ss_pred EECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHH
Confidence 9999999 9999999999999999999999999999999999999873
No 23
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=4.3e-63 Score=455.19 Aligned_cols=283 Identities=35% Similarity=0.611 Sum_probs=267.4
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhH
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSW 81 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~ 81 (288)
+++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 27 ~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 104 (487)
T 2w8n_A 27 TFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC--RWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKE 104 (487)
T ss_dssp EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred eEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 578999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCccccc-cCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCC
Q 047489 82 AKAVDVPAVAENVRYFAGAADKIHGEVLKM-SRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAE 160 (288)
Q Consensus 82 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~ 160 (288)
+.. |+..+++.++|++...++..+...+. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 105 a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~ 183 (487)
T 2w8n_A 105 AHG-EILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAE 183 (487)
T ss_dssp HHH-HHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCT
T ss_pred HHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCC
Confidence 986 99999999999999888765554333 2345678999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCceEEEe---CCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCC
Q 047489 161 QTPLTALYCAHLAKLAGIPDGVLNVVP---GFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGK 237 (288)
Q Consensus 161 ~~~~~~~~l~~~l~~ag~p~~~v~~i~---~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~ 237 (288)
.+|.++..+++++.++|+|+|++++++ +++.+.++.|+.|+++|.|.||||+.+|+.|.+.++. +++|+++|+|||
T Consensus 184 ~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~-~~~pv~lElGGk 262 (487)
T 2w8n_A 184 DTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAAN-SVKRVSMELGGL 262 (487)
T ss_dssp TCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHT-TTCEEEEEECEE
T ss_pred cchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhc-cCCcEEEecCCC
Confidence 999999999999999999999999999 7566788999999999999999999999999999987 889999999999
Q ss_pred CceeecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 238 SPLLIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 238 ~~~iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
||+||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 263 ~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 313 (487)
T 2w8n_A 263 APFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFA 313 (487)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHH
T ss_pred CeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999873
No 24
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.1e-62 Score=454.89 Aligned_cols=282 Identities=30% Similarity=0.457 Sum_probs=265.7
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhH
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSW 81 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~ 81 (288)
+++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 43 ~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 120 (521)
T 4e4g_A 43 VSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP--KWAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDD 120 (521)
T ss_dssp EEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHH
T ss_pred EEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 578999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCccccc-cCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCC
Q 047489 82 AKAVDVPAVAENVRYFAGAADKIHGEVLKM-SRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAE 160 (288)
Q Consensus 82 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~ 160 (288)
++. |+..+++.++|++...+...+...+. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 121 a~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse 199 (521)
T 4e4g_A 121 AKG-DIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSE 199 (521)
T ss_dssp HHH-HHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCC
Confidence 986 99999999999998777665543322 2355678999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCCCce
Q 047489 161 QTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGKSPL 240 (288)
Q Consensus 161 ~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~~~~ 240 (288)
.+|.++..+++++.++|+|+|+++++++ +.+..+.|+.||++|.|.||||+.+|+.|.+.++. +++|+++|+|||||+
T Consensus 200 ~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~ 277 (521)
T 4e4g_A 200 RDPSVPIRLAELMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAM-NGKRAQCFGGAKNHM 277 (521)
T ss_dssp TSTHHHHHHHHHHHHTTCCTTSEEECCC-CHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCEEE
T ss_pred cchHHHHHHHHHHHHhCCCcCeEEEEeC-ChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhh-cCCCeeecCCCCCeE
Confidence 9999999999999999999999999999 56677999999999999999999999999999988 789999999999999
Q ss_pred eecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCC-chHHHHHhhC
Q 047489 241 LIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIK-WPSRWSKAAI 288 (288)
Q Consensus 241 iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~-~~~~f~~~l~ 288 (288)
||++|||+|.|++.+++++|.|+||.|++++++|||++ +||+|+++|+
T Consensus 278 IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~ 326 (521)
T 4e4g_A 278 IIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLV 326 (521)
T ss_dssp EECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHH
T ss_pred EEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 9999999873
No 25
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=1.1e-62 Score=455.37 Aligned_cols=283 Identities=28% Similarity=0.434 Sum_probs=266.9
Q ss_pred ceecccCC-CCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchh
Q 047489 2 TFETIDPR-TGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHS 80 (288)
Q Consensus 2 ~~~~~~p~-~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~ 80 (288)
+++++||. ||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..
T Consensus 52 ~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 129 (516)
T 1uzb_A 52 RMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWV 129 (516)
T ss_dssp EEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred eEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 47899999 6999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHhhccHHHHHHHHHHHHHhhhhhcCcccc--ccCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeC
Q 047489 81 WAKAVDVPAVAENVRYFAGAADKIHGEVLK--MSRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKP 158 (288)
Q Consensus 81 ~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkp 158 (288)
+++. |+..+++.++||+..+++..+...+ ...+...++.++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 130 ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKp 208 (516)
T 1uzb_A 130 EASA-DVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKP 208 (516)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeC
Confidence 9985 9999999999999988887765432 223456689999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhh------cCCCcceEE
Q 047489 159 AEQTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAAS------TSNLKPVSL 232 (288)
Q Consensus 159 s~~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~------~~~~~~~~~ 232 (288)
|+.+|+++..+++++.++|+|+|+++++++++.+.++.|+.|+++|.|.||||+.+|+.|.+.++ . +++|+++
T Consensus 209 s~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~-~~~~v~l 287 (516)
T 1uzb_A 209 AEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQT-WFKRAYV 287 (516)
T ss_dssp CGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCC-SCCEEEE
T ss_pred CCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhcccccc-ccceeEE
Confidence 99999999999999999999999999999977788999999999999999999999999999887 4 7899999
Q ss_pred eCCCCCceeecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 233 EFGGKSPLLIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 233 e~gg~~~~iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
|+|||||+||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 288 ElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 343 (516)
T 1uzb_A 288 ETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVL 343 (516)
T ss_dssp ECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHH
T ss_pred ecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999873
No 26
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=1.9e-62 Score=452.05 Aligned_cols=283 Identities=42% Similarity=0.716 Sum_probs=270.1
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhH
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSW 81 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~ 81 (288)
+++++||.||+.+++++.++.++++++++.|++|+. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 23 ~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~e 100 (490)
T 2ve5_A 23 TFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAE 100 (490)
T ss_dssp EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred eEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 578999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCccccccCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCCC
Q 047489 82 AKAVDVPAVAENVRYFAGAADKIHGEVLKMSRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAEQ 161 (288)
Q Consensus 82 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~~ 161 (288)
++..|+..+++.++|++...++..+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 101 a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~vVlKps~~ 180 (490)
T 2ve5_A 101 TRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEV 180 (490)
T ss_dssp HTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred HhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeeEeeccccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 87559999999999999988876655555445667789999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHh-hcCCCcceEEeCCCCCce
Q 047489 162 TPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAA-STSNLKPVSLEFGGKSPL 240 (288)
Q Consensus 162 ~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~-~~~~~~~~~~e~gg~~~~ 240 (288)
+|.++..+++++.++|+|+|+++++++++.+.++.|..||++|.|.||||+.+|+.|.+.+ +. +++|+++|+|||||+
T Consensus 181 tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~~a~a~-~l~~v~lElGGk~p~ 259 (490)
T 2ve5_A 181 TPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSS-SLKEVTMELGGKSPL 259 (490)
T ss_dssp SCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHH-HCCEEEEECCCCCEE
T ss_pred chHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHHhchhc-cccceEEEcCCCcee
Confidence 9999999999999999999999999998888999999999999999999999999999998 76 789999999999999
Q ss_pred eecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhh
Q 047489 241 LIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAA 287 (288)
Q Consensus 241 iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l 287 (288)
||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|
T Consensus 260 iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 306 (490)
T 2ve5_A 260 IIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKV 306 (490)
T ss_dssp EECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999987
No 27
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=1.2e-62 Score=452.31 Aligned_cols=283 Identities=35% Similarity=0.642 Sum_probs=268.2
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhH
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSW 81 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~ 81 (288)
+++++||.||+++++++.++.++++++++.|++|+. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 26 ~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~ 103 (481)
T 3jz4_A 26 AIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAE 103 (481)
T ss_dssp EEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred eEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 578999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCccccc-cCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCC
Q 047489 82 AKAVDVPAVAENVRYFAGAADKIHGEVLKM-SRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAE 160 (288)
Q Consensus 82 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~ 160 (288)
++. |+..+++.++|++....+..+...+. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 104 a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~ 182 (481)
T 3jz4_A 104 AKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPAS 182 (481)
T ss_dssp HHH-HHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCT
T ss_pred HHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCC
Confidence 986 99999999999998877665544432 2355678999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCCCce
Q 047489 161 QTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGKSPL 240 (288)
Q Consensus 161 ~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~~~~ 240 (288)
.+|.++..+++++.++|+|+|+++++++++.+.++.|+.||++|.|.||||+.+|+.|.+.++. +++|+++|+|||||+
T Consensus 183 ~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~p~ 261 (481)
T 3jz4_A 183 QTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAK-DIKKVSLELGGNAPF 261 (481)
T ss_dssp TSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTT-TTCEEEEECCCCEEE
T ss_pred CCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhh-cCCceEEecCCCCeE
Confidence 9999999999999999999999999999778899999999999999999999999999999987 889999999999999
Q ss_pred eecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 241 LIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 241 iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 262 iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 309 (481)
T 3jz4_A 262 IVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQ 309 (481)
T ss_dssp EECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHH
T ss_pred EEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999873
No 28
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=1.8e-62 Score=450.28 Aligned_cols=279 Identities=28% Similarity=0.506 Sum_probs=265.1
Q ss_pred eecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhHH
Q 047489 3 FETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSWA 82 (288)
Q Consensus 3 ~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~a 82 (288)
++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..++
T Consensus 14 ~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea 91 (486)
T 3pqa_A 14 MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPITKRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQA 91 (486)
T ss_dssp EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHH--HHHTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH
T ss_pred eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence 68999999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred hhccHHHHHHHHHHHHHhhhhhcCccccccCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCCCC
Q 047489 83 KAVDVPAVAENVRYFAGAADKIHGEVLKMSRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAEQT 162 (288)
Q Consensus 83 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~~~ 162 (288)
+. |+..+++.++|++..+++..+...+.+ +...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 92 ~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~t 169 (486)
T 3pqa_A 92 RV-EVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKA 169 (486)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECTTS
T ss_pred HH-HHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCc
Confidence 85 999999999999999888765544433 5567899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHc----CCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCCC
Q 047489 163 PLTALYCAHLAKLA----GIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGKS 238 (288)
Q Consensus 163 ~~~~~~l~~~l~~a----g~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~~ 238 (288)
|.++..+++++.++ |+|+|+++++++++.+.++.|+.||++|.|.||||+.+|+.|.+.++ ++|+++|+||||
T Consensus 170 p~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa---~~~v~lELGGk~ 246 (486)
T 3pqa_A 170 PLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG---FKKIALELGGVN 246 (486)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC---SSEEEEECCCCE
T ss_pred hHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC---CCceeeccCCcC
Confidence 99999999999998 99999999999977788999999999999999999999999998876 699999999999
Q ss_pred ceeecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 239 PLLIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 239 ~~iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
|+||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 247 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 296 (486)
T 3pqa_A 247 PNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFV 296 (486)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHH
T ss_pred cEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999873
No 29
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=3.6e-62 Score=447.47 Aligned_cols=282 Identities=26% Similarity=0.415 Sum_probs=267.2
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhH
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSW 81 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~ 81 (288)
+++++||.||+++++++.++.++++++++.|++|+. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 8 ~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 85 (462)
T 3etf_A 8 QALSVNPATGQTLAAMPWANAQEIEHALSLAASGFK--KWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQ 85 (462)
T ss_dssp CSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred ccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 578999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCccccccCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCCC
Q 047489 82 AKAVDVPAVAENVRYFAGAADKIHGEVLKMSRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAEQ 161 (288)
Q Consensus 82 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~~ 161 (288)
++. |+..+++.++|++...++..+.......+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 86 a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~ 164 (462)
T 3etf_A 86 ARA-EVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPN 164 (462)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred HHH-HHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCC
Confidence 986 9999999999999988877665532223556789999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCCCcee
Q 047489 162 TPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGKSPLL 241 (288)
Q Consensus 162 ~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~~~~i 241 (288)
+|.++..+.+++.++|+|+|+++++++ +.+.+..|+.|++++.|.||||+.+|+.|.+.++. +++|+++|+|||||+|
T Consensus 165 tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~p~i 242 (462)
T 3etf_A 165 VTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSDPFI 242 (462)
T ss_dssp CHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCCEEEECCCCEEEE
T ss_pred CcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhc-cCCceEEEcCCCCccE
Confidence 999999999999999999999999998 66788999999999999999999999999999998 7899999999999999
Q ss_pred ecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 242 IFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 242 v~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
|++|||+|.|++.+++++|+|+||.|++++++|||+++||+|+++|+
T Consensus 243 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 289 (462)
T 3etf_A 243 VLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFV 289 (462)
T ss_dssp ECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999873
No 30
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=4.7e-62 Score=447.62 Aligned_cols=281 Identities=28% Similarity=0.462 Sum_probs=264.0
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhH
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSW 81 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~ 81 (288)
+++++||.||+++++++.++.++++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 19 ~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 96 (475)
T 1euh_A 19 EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKS 96 (475)
T ss_dssp EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHH
T ss_pred ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 468999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCcccccc-CC----cee-EEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEE
Q 047489 82 AKAVDVPAVAENVRYFAGAADKIHGEVLKMS-RE----LQA-YTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMV 155 (288)
Q Consensus 82 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~----~~~-~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vi 155 (288)
++. |+..+++.++|++..+++..+...+.+ .+ ... +..++|+|||++|+|||||+...++++++||++||+||
T Consensus 97 a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vV 175 (475)
T 1euh_A 97 AVS-EVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIA 175 (475)
T ss_dssp HHH-HHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEE
T ss_pred HHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHHHHHHHHHHHHcCCEEE
Confidence 875 999999999999998877655543322 23 355 89999999999999999999999999999999999999
Q ss_pred EeCCCCChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCC
Q 047489 156 VKPAEQTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFG 235 (288)
Q Consensus 156 lkps~~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~g 235 (288)
+|||+.+|.++..+++++.++|+|+|+++++++++.+.++.|+.|+++|.|.||||+.+|+.|.+.++ ++|+++|+|
T Consensus 176 lKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa---~~~v~lElG 252 (475)
T 1euh_A 176 FKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG---MRPIMLELG 252 (475)
T ss_dssp EECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT---TSCEEEECC
T ss_pred EeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHhcC---CCcEEEEcC
Confidence 99999999999999999999999999999999866678899999999999999999999999999876 699999999
Q ss_pred CCCceeecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 236 GKSPLLIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 236 g~~~~iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
||||+||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 253 Gk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~ 305 (475)
T 1euh_A 253 GKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIR 305 (475)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHH
T ss_pred CcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999873
No 31
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=5.5e-62 Score=448.50 Aligned_cols=282 Identities=24% Similarity=0.396 Sum_probs=264.2
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhH
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSW 81 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~ 81 (288)
+++++||.||+++++++.++.++++++++.|++|+. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 23 ~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 100 (485)
T 4dng_A 23 TEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK--EWAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIK 100 (485)
T ss_dssp EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred eEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 578999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCccccc--cCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCC
Q 047489 82 AKAVDVPAVAENVRYFAGAADKIHGEVLKM--SRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPA 159 (288)
Q Consensus 82 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps 159 (288)
++. |+..+++.+++++...++..+...+. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 101 a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps 179 (485)
T 4dng_A 101 STI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPD 179 (485)
T ss_dssp HHH-HHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHH-HHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECC
Confidence 987 99999999999999888766554442 234667899999999999999999999999999999999999999999
Q ss_pred CCChHHH-HHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCCC
Q 047489 160 EQTPLTA-LYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGKS 238 (288)
Q Consensus 160 ~~~~~~~-~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~~ 238 (288)
+.+|.++ ..+.+++.++|+|+|+++++++++.+.++.|+.||+++.|.||||+.+|+.|.+.++. +++|+++|+||||
T Consensus 180 ~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~ 258 (485)
T 4dng_A 180 IQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGR-AFKRMALELGGNN 258 (485)
T ss_dssp GGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHH-HTCEEEEEECCCE
T ss_pred CcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhh-hccchhhhcCCCC
Confidence 9999999 9999999999999999999999776788999999999999999999999999999987 7899999999999
Q ss_pred ceeecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhh
Q 047489 239 PLLIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAA 287 (288)
Q Consensus 239 ~~iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l 287 (288)
|+||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|
T Consensus 259 p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l 307 (485)
T 4dng_A 259 PFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKF 307 (485)
T ss_dssp EEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHH
T ss_pred ceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999987
No 32
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=1.6e-61 Score=446.08 Aligned_cols=282 Identities=24% Similarity=0.406 Sum_probs=263.1
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhH
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSW 81 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~ 81 (288)
+++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 38 ~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 115 (500)
T 2j6l_A 38 VITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVE 115 (500)
T ss_dssp EEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHH
T ss_pred eEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 478999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCcccccc-CCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCC
Q 047489 82 AKAVDVPAVAENVRYFAGAADKIHGEVLKMS-RELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAE 160 (288)
Q Consensus 82 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~ 160 (288)
+. .|+...++.++|++...+++.+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 116 a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~ 194 (500)
T 2j6l_A 116 GV-GEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAP 194 (500)
T ss_dssp HH-HHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCG
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCC
Confidence 86 4999999999999988877655443322 234457889999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHH----HcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCC
Q 047489 161 QTPLTALYCAHLAK----LAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGG 236 (288)
Q Consensus 161 ~~~~~~~~l~~~l~----~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg 236 (288)
.+|.++..+++++. ++|+|+|+++++++ +.+.++.|..|+++|.|.||||+.+|+.|.+.++. +++|+++|+||
T Consensus 195 ~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~~aa~-~l~~v~lELGG 272 (500)
T 2j6l_A 195 TTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQE-RFGRSLLELGG 272 (500)
T ss_dssp GGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHH-TTCEEEEECCC
T ss_pred ccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHhcc-CCCceEEEcCC
Confidence 99999999888765 56999999999999 78889999999999999999999999999999988 78999999999
Q ss_pred CCceeecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 237 KSPLLIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 237 ~~~~iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
|||+||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 273 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 324 (500)
T 2j6l_A 273 NNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLK 324 (500)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHH
T ss_pred CCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999873
No 33
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.6e-61 Score=443.98 Aligned_cols=282 Identities=29% Similarity=0.419 Sum_probs=265.3
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhH
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSW 81 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~ 81 (288)
.++++||.||+++++++.++.++++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 21 ~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 98 (490)
T 3ju8_A 21 TLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWE 98 (490)
T ss_dssp EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred eEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 467889999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCccccccCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCCC
Q 047489 82 AKAVDVPAVAENVRYFAGAADKIHGEVLKMSRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAEQ 161 (288)
Q Consensus 82 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~~ 161 (288)
++. |+..+++.++|++...++..+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 99 a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~ 177 (490)
T 3ju8_A 99 SAT-EVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSEL 177 (490)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTT
T ss_pred HHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCC
Confidence 985 9999999999999888777665543223445677899999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcce-EEeCCCCCce
Q 047489 162 TPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPV-SLEFGGKSPL 240 (288)
Q Consensus 162 ~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~-~~e~gg~~~~ 240 (288)
+|.++..+++++.++|+|+|+++++++ +.+.++.|+.|+++|.|.||||+.+|+.|.+.++. +++|+ ++|+|||||+
T Consensus 178 tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~-~~~~v~~lElGGk~p~ 255 (490)
T 3ju8_A 178 TPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGG-QPQKILALEMGGNNPL 255 (490)
T ss_dssp CHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTT-CTTSEEEEECCCCEEE
T ss_pred CcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhc-cCCCcEEeecCCCCeE
Confidence 999999999999999999999999999 77899999999999999999999999999999887 77998 7999999999
Q ss_pred eecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCc-hHHHHHhhC
Q 047489 241 LIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKW-PSRWSKAAI 288 (288)
Q Consensus 241 iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~-~~~f~~~l~ 288 (288)
||++|||+|.|++.+++++|+|+||.|++++++|||+++ ||+|+++|+
T Consensus 256 iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~ 304 (490)
T 3ju8_A 256 VVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLV 304 (490)
T ss_dssp EECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHH
Confidence 999999999999999999999999999999999999996 999999873
No 34
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.9e-61 Score=446.42 Aligned_cols=282 Identities=32% Similarity=0.525 Sum_probs=266.5
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhH
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSW 81 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~ 81 (288)
+++++||.||+++++++.++.++++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 29 ~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 106 (508)
T 3r64_A 29 ISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA--EWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSK 106 (508)
T ss_dssp EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCCHHH
T ss_pred EEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Confidence 578999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCccccc--cCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCC
Q 047489 82 AKAVDVPAVAENVRYFAGAADKIHGEVLKM--SRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPA 159 (288)
Q Consensus 82 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps 159 (288)
++. |+..+++.++|++...++..+ ..+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 107 a~~-Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps 184 (508)
T 3r64_A 107 ANL-EITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPA 184 (508)
T ss_dssp HHH-HHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHH-HHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCEEEEECC
Confidence 987 999999999999988877655 3332 234667899999999999999999999999999999999999999999
Q ss_pred CCChHHH-HHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcC-CCcceEEeCCCC
Q 047489 160 EQTPLTA-LYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTS-NLKPVSLEFGGK 237 (288)
Q Consensus 160 ~~~~~~~-~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~-~~~~~~~e~gg~ 237 (288)
+.+|.++ ..+.+++.++|+|+|+++++++++.+.++.|+.||++|.|.||||+.+|+.|.+.++.+ +++|+++|+|||
T Consensus 185 ~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~v~lElGGk 264 (508)
T 3r64_A 185 SDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGN 264 (508)
T ss_dssp TTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHSSSSCCEEEEECCCC
T ss_pred CCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhcccCCCceEeecCCc
Confidence 9999999 99999999999999999999997788999999999999999999999999999888752 569999999999
Q ss_pred CceeecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhh
Q 047489 238 SPLLIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAA 287 (288)
Q Consensus 238 ~~~iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l 287 (288)
||+||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|
T Consensus 265 ~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 314 (508)
T 3r64_A 265 APFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKF 314 (508)
T ss_dssp CEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHH
T ss_pred CceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987
No 35
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=1.8e-61 Score=445.61 Aligned_cols=281 Identities=27% Similarity=0.400 Sum_probs=263.5
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhH
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSW 81 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~ 81 (288)
+++++||.||+++++++.++.+|++++++.|++||.. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 33 ~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 111 (501)
T 1uxt_A 33 EIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSA 111 (501)
T ss_dssp EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred eEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhh-hhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 5789999999999999999999999999999999862 399999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCccccc---cC--CceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEE
Q 047489 82 AKAVDVPAVAENVRYFAGAADKIHGEVLKM---SR--ELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVV 156 (288)
Q Consensus 82 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vil 156 (288)
+.. |+..+++.++|++..+++..+...+. +. +...+..++|+|||++|+|||||+...++++++||++||+||+
T Consensus 112 a~~-Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 190 (501)
T 1uxt_A 112 AVG-EVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVV 190 (501)
T ss_dssp HHH-HHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHH-HHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEE
Confidence 984 99999999999999888876554443 22 3367899999999999999999999999999999999999999
Q ss_pred eCCCCChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCC
Q 047489 157 KPAEQTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGG 236 (288)
Q Consensus 157 kps~~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg 236 (288)
|||+.+|.++..+++++.++|+|+|+++++++++ +.++.|..|+++|.|.||||+.+|+.|.+.++ ++|+++|+||
T Consensus 191 Kps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~aa---l~~v~lELGG 266 (501)
T 1uxt_A 191 KPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVVKVGG---VKQYVMELGG 266 (501)
T ss_dssp ECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHHHHHC---SSEEEEECCC
T ss_pred eCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHHHhcC---CCeEEEEcCC
Confidence 9999999999999999999999999999999966 88999999999999999999999999999876 6999999999
Q ss_pred CCceeecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 237 KSPLLIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 237 ~~~~iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
|||+||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 267 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 318 (501)
T 1uxt_A 267 GDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVA 318 (501)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHH
T ss_pred cCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999873
No 36
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=1.1e-61 Score=445.68 Aligned_cols=280 Identities=32% Similarity=0.501 Sum_probs=264.1
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhH
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSW 81 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~ 81 (288)
+++++||.||+++++++.++.+|++++++.|++|+. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 24 ~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~e 101 (478)
T 3ty7_A 24 TIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL--EFRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSL 101 (478)
T ss_dssp EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred eEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 578999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCccccccCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCCC
Q 047489 82 AKAVDVPAVAENVRYFAGAADKIHGEVLKMSRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAEQ 161 (288)
Q Consensus 82 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~~ 161 (288)
+...|+..+++.+++++..+++..+.. .....+..++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 102 a~~~ev~~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~ 177 (478)
T 3ty7_A 102 SERVHYQMGLNHFVAARDALDNYEFEE----RRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEE 177 (478)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHCCSEE----EETTEEEEEEECCCEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTT
T ss_pred HhHHHHHHHHHHHHHHHHHHHHhhccc----CCccceEEecCceEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCc
Confidence 955699999999999999888765533 1235678999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCCCcee
Q 047489 162 TPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGKSPLL 241 (288)
Q Consensus 162 ~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~~~~i 241 (288)
+|.++..+++++.++|+|+|+++++++++.+.++.|..||++|.|.||||+.+|+.|.+.++. +++|+++|+|||||+|
T Consensus 178 tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~-~~~~v~lElGGk~p~i 256 (478)
T 3ty7_A 178 TPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAK-DFKKVSLELGGKSPYI 256 (478)
T ss_dssp SCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTT-TTCEEECCCCCCCEEE
T ss_pred chHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHh-cCCceEEecCCCCCcc
Confidence 999999999999999999999999999778899999999999999999999999999999887 7899999999999999
Q ss_pred ecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 242 IFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 242 v~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
|++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 257 V~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~ 303 (478)
T 3ty7_A 257 VLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELK 303 (478)
T ss_dssp ECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999873
No 37
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=2.3e-61 Score=443.95 Aligned_cols=280 Identities=33% Similarity=0.509 Sum_probs=263.3
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhH
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSW 81 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~ 81 (288)
+++++||.||+++++++.++.++++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 22 ~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 99 (486)
T 1t90_A 22 YEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TWSKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKE 99 (486)
T ss_dssp EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHH
T ss_pred eEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 478999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCcccc-ccCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCC
Q 047489 82 AKAVDVPAVAENVRYFAGAADKIHGEVLK-MSRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAE 160 (288)
Q Consensus 82 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~ 160 (288)
+.. |+..+++.++|++...+...+...+ ...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 100 a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~ 178 (486)
T 1t90_A 100 ALG-EVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSE 178 (486)
T ss_dssp HHH-HHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCS
T ss_pred HHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCC
Confidence 875 9999999999998766665544332 22345668899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCCCce
Q 047489 161 QTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGKSPL 240 (288)
Q Consensus 161 ~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~~~~ 240 (288)
.+|.++..+++++.++|+|+|+++++++ +.+.++.|+.|+++|.|.||||+.+|+.|.+.++. +++|+++|+|||||+
T Consensus 179 ~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~-~~~pv~lElGGk~p~ 256 (486)
T 1t90_A 179 RTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSE-NLKRVQSLTGAKNHT 256 (486)
T ss_dssp SSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCEEE
T ss_pred CChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhc-cCCcEEeccCCCCcE
Confidence 9999999999999999999999999998 66788999999999999999999999999999988 789999999999999
Q ss_pred eecCCCCHHHHHHHHHHHhhccCCcccccCce-EEEeCCchHHHHHhh
Q 047489 241 LIFDDADVNTTADTALLGNLFNKGEICVASSR-VYCQIKWPSRWSKAA 287 (288)
Q Consensus 241 iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~-v~V~~~~~~~f~~~l 287 (288)
||++|||+|.|++.+++++|.|+||.|+++++ ++||++ ||+|+++|
T Consensus 257 iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l 303 (486)
T 1t90_A 257 IVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKL 303 (486)
T ss_dssp EECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHH
Confidence 99999999999999999999999999999999 999999 99999987
No 38
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=1.6e-60 Score=435.46 Aligned_cols=281 Identities=24% Similarity=0.386 Sum_probs=248.9
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhH
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSW 81 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~ 81 (288)
..+++||+||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 7 ~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 84 (457)
T 3lns_A 7 HHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFA--TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDV 84 (457)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHH
T ss_pred cccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 357899999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCcc-ccc---cCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEe
Q 047489 82 AKAVDVPAVAENVRYFAGAADKIHGEV-LKM---SRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVK 157 (288)
Q Consensus 82 a~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilk 157 (288)
++..|+..+++.+++++...++..+.. .+. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 85 a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlK 164 (457)
T 3lns_A 85 VDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIK 164 (457)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEE
Confidence 875699999999999998887765432 111 1345678999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCC
Q 047489 158 PAEQTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGK 237 (288)
Q Consensus 158 ps~~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~ 237 (288)
||+.+|.++..+++++.++ +|+|+++++++ +.+.++.|+. +++|.|.||||+.+|+.|.+.+++ +++|+++|+|||
T Consensus 165 ps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~-~l~pv~lElGGk 240 (457)
T 3lns_A 165 PSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGGK 240 (457)
T ss_dssp CCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCC
T ss_pred CCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhh-ccCceEEECCCC
Confidence 9999999999999999998 99999999999 7788899988 799999999999999999999988 789999999999
Q ss_pred CceeecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 238 SPLLIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 238 ~~~iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
||+||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 241 ~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 291 (457)
T 3lns_A 241 CPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLV 291 (457)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHH
T ss_pred CCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999873
No 39
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=1.8e-60 Score=440.33 Aligned_cols=283 Identities=22% Similarity=0.322 Sum_probs=259.8
Q ss_pred ceecccCCCCcee-EEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchh
Q 047489 2 TFETIDPRTGEAI-ARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHS 80 (288)
Q Consensus 2 ~~~~~~p~~g~~~-~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~ 80 (288)
+++++||.||+++ ++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|++++++|+++++.|+|||..
T Consensus 8 ~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 85 (510)
T 1ez0_A 8 VFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEV 85 (510)
T ss_dssp EEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred eEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 5789999999999 79999999999999999999999 99999999999999999999999999999999999999998
Q ss_pred HHhhccHHHHHHHHHHHHHhhhh--hcCcccc----c--cCC-ceeEEEeecceeEEEEcCCCcchHhh--HHHHHHHHh
Q 047489 81 WAKAVDVPAVAENVRYFAGAADK--IHGEVLK----M--SRE-LQAYTLREPIGVVGHIVPWNFPTFIF--FMKVSPTLA 149 (288)
Q Consensus 81 ~a~~~ev~~~~~~l~~~~~~~~~--~~~~~~~----~--~~~-~~~~~~~~p~Gvv~~i~p~n~P~~~~--~~~~~~AL~ 149 (288)
++.. |+..+++.++||+..+++ ..+.... . +.+ ...+..++|+|||++|+|||||+... .+++++||+
T Consensus 86 ~a~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALa 164 (510)
T 1ez0_A 86 RLTG-EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALA 164 (510)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHH
T ss_pred HHHH-HHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHH
Confidence 8865 999999999999988875 3332211 1 111 13578999999999999999999985 499999999
Q ss_pred cCCeEEEeCCCCChHHHHHHHHHH----HHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcC
Q 047489 150 AGCTMVVKPAEQTPLTALYCAHLA----KLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTS 225 (288)
Q Consensus 150 aGN~vilkps~~~~~~~~~l~~~l----~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~ 225 (288)
+||+||+|||+.+|.++..+++++ .++|+|+|+++++++++.+.++.|+.|+++|.|.||||+.+|+.|.+.++.
T Consensus 165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~- 243 (510)
T 1ez0_A 165 AGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHE- 243 (510)
T ss_dssp HTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHH-
T ss_pred cCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhc-
Confidence 999999999999999999999987 568999999999999777889999999999999999999999999999987
Q ss_pred CC--cceEEeCCCCCceeecCCCCHH--HHHHHHHHHhhccCCcccccCceEEEeCC-chHHHHHhhC
Q 047489 226 NL--KPVSLEFGGKSPLLIFDDADVN--TTADTALLGNLFNKGEICVASSRVYCQIK-WPSRWSKAAI 288 (288)
Q Consensus 226 ~~--~~~~~e~gg~~~~iv~~~ad~~--~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~-~~~~f~~~l~ 288 (288)
++ +|+++|+|||||+||++|||+| .|++.+++++|.|+||.|++++++|||++ +||+|+++|+
T Consensus 244 ~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~ 311 (510)
T 1ez0_A 244 RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQ 311 (510)
T ss_dssp SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHH
T ss_pred cCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHH
Confidence 54 9999999999999999999999 99999999999999999999999999999 9999999873
No 40
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=1.2e-60 Score=438.13 Aligned_cols=279 Identities=27% Similarity=0.405 Sum_probs=259.0
Q ss_pred CceecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchh
Q 047489 1 KTFETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHS 80 (288)
Q Consensus 1 ~~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~ 80 (288)
++++++||.||+++++++.++.++++++++.|++||. .|+.++..+|.++|+++++.|++++++|+++++.|+||+..
T Consensus 6 ~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 83 (474)
T 4h7n_A 6 KTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQS--RWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLSI 83 (474)
T ss_dssp CCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHH--HHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSHH
T ss_pred CEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHH
Confidence 5799999999999999999999999999999999999 99999999999999999999999999999999999999854
Q ss_pred HHhhccHHHHHHHHHHHHHhhhhhcCcccc-c-cCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeC
Q 047489 81 WAKAVDVPAVAENVRYFAGAADKIHGEVLK-M-SRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKP 158 (288)
Q Consensus 81 ~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkp 158 (288)
. . .|+...++.+++++....+....... . .++......++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 84 ~-~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKp 161 (474)
T 4h7n_A 84 T-V-LEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKP 161 (474)
T ss_dssp H-H-HHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEE
T ss_pred H-H-HHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecc
Confidence 4 3 38999999999999888776544332 1 23445567889999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCCC
Q 047489 159 AEQTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGKS 238 (288)
Q Consensus 159 s~~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~~ 238 (288)
|+.+|.++..+.+++.++|+|+++++++++ +.+.+..|..| ++.|.||||+.+|+.|.+.++. +++|+++|+||||
T Consensus 162 s~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~-~~~~v~lElGGk~ 237 (474)
T 4h7n_A 162 SEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAAR-RFIPAYLELGGKD 237 (474)
T ss_dssp CTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHH-HTCCEEEECCCCE
T ss_pred cccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhc-ccccccccCCCcC
Confidence 999999999999999999999999999999 67888888865 9999999999999999999988 7899999999999
Q ss_pred ceeecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhh
Q 047489 239 PLLIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAA 287 (288)
Q Consensus 239 ~~iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l 287 (288)
|+||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|
T Consensus 238 p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l 286 (474)
T 4h7n_A 238 PAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQL 286 (474)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHH
T ss_pred ccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999886
No 41
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=1.1e-59 Score=459.67 Aligned_cols=284 Identities=29% Similarity=0.458 Sum_probs=268.6
Q ss_pred ceecccCCC-CceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchh
Q 047489 2 TFETIDPRT-GEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHS 80 (288)
Q Consensus 2 ~~~~~~p~~-g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~ 80 (288)
+++++||.| |+++++++.++.++++++++.|++|+. .|+.++..+|.++|+++++.|++++++|+++++.|+|||..
T Consensus 546 ~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eRa~iL~~~Adll~~~~~eLa~~~~~E~GK~~~ 623 (1026)
T 4f9i_A 546 LIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWD 623 (1026)
T ss_dssp EEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHH
T ss_pred cEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChh
Confidence 478999998 999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHhhccHHHHHHHHHHHHHhhhhhcCccccc-cCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCC
Q 047489 81 WAKAVDVPAVAENVRYFAGAADKIHGEVLKM-SRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPA 159 (288)
Q Consensus 81 ~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps 159 (288)
++.. |+..+++.++||+..++++.+...+. ..+...+..++|+|||++|+|||||+...++.+++||++||+||+|||
T Consensus 624 ea~~-Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPs 702 (1026)
T 4f9i_A 624 QAYA-DVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPS 702 (1026)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECC
T ss_pred hHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcC
Confidence 9986 99999999999999998876654432 345677899999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhc-----CCCcceEEeC
Q 047489 160 EQTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAAST-----SNLKPVSLEF 234 (288)
Q Consensus 160 ~~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~-----~~~~~~~~e~ 234 (288)
+.+|.++..+++++.++|+|+|++|++++++.+.++.|+.||+++.|.||||+.+|+.|.+.++. .+++|+++|+
T Consensus 703 e~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lEl 782 (1026)
T 4f9i_A 703 GITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEM 782 (1026)
T ss_dssp GGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEEC
T ss_pred ccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEec
Confidence 99999999999999999999999999999888899999999999999999999999999999873 3679999999
Q ss_pred CCCCceeecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 235 GGKSPLLIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 235 gg~~~~iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
|||||+||++|||+|.|++.+++|+|.|+||.|++++++|||+++||+|+++|+
T Consensus 783 GGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~ 836 (1026)
T 4f9i_A 783 GGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLV 836 (1026)
T ss_dssp CCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHH
T ss_pred CCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999873
No 42
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=1.7e-59 Score=436.04 Aligned_cols=282 Identities=24% Similarity=0.327 Sum_probs=261.1
Q ss_pred eecccCCC-CceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh-HHHHHHHHHHhcCCchh
Q 047489 3 FETIDPRT-GEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEH-LEELAVLEALDAGKLHS 80 (288)
Q Consensus 3 ~~~~~p~~-g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~-~~~l~~~~~~~~gk~~~ 80 (288)
+.++||.| |+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++ +++|+++++.|+||+..
T Consensus 79 ~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~~el~~~~~~e~Gk~~~ 156 (563)
T 4e3x_A 79 QYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARK--EWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVI 156 (563)
T ss_dssp EEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHCCCHH
T ss_pred eeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhccHHHHHHHHHHHcCCCHH
Confidence 46789998 799999999999999999999999999 999999999999999999999998 99999999999999999
Q ss_pred HHhhccHHHHHHHHHHHHHhhhhhcCcccc-ccCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCC
Q 047489 81 WAKAVDVPAVAENVRYFAGAADKIHGEVLK-MSRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPA 159 (288)
Q Consensus 81 ~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps 159 (288)
+++.+++..+++.++|++..+++..+.... .+.+...+.++.|+|||++|+|||||+....+.++||| +||+||+|||
T Consensus 157 ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs 235 (563)
T 4e3x_A 157 QAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPS 235 (563)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECC
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECC
Confidence 998745999999999999998887664332 22234456667778999999999999999999999999 6999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCc------ceEEe
Q 047489 160 EQTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLK------PVSLE 233 (288)
Q Consensus 160 ~~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~------~~~~e 233 (288)
+.+|.++..+++++.++|+|+|++|++++++.+.++.|+.||+++.|.||||+.+|+.|.+.++. +++ |+++|
T Consensus 236 ~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~aa~-~lk~~~~~prv~lE 314 (563)
T 4e3x_A 236 DTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQ-NLDRFRTFPRLAGE 314 (563)
T ss_dssp GGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHHHH-TTTTCSSCCEEEEE
T ss_pred CCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHh-hCCccccCCceecc
Confidence 99999999999999999999999999999777889999999999999999999999999999988 666 49999
Q ss_pred CCCCCceeecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 234 FGGKSPLLIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 234 ~gg~~~~iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
+|||||+||++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 315 lGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~ 369 (563)
T 4e3x_A 315 CGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLL 369 (563)
T ss_dssp CCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHH
T ss_pred CCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999873
No 43
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.5e-59 Score=434.45 Aligned_cols=280 Identities=23% Similarity=0.309 Sum_probs=257.8
Q ss_pred cccCCCCceeE-EEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhHHh
Q 047489 5 TIDPRTGEAIA-RIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSWAK 83 (288)
Q Consensus 5 ~~~p~~g~~~~-~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~a~ 83 (288)
++||.||++++ +++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+++
T Consensus 44 v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~ 121 (528)
T 3v4c_A 44 TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFW--TYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLN 121 (528)
T ss_dssp EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 78999999998 9999999999999999999999 99999999999999999999999999999999999999999987
Q ss_pred hccHHHHHHHHHHHHHhhhhh--cCcccc----c---cCCceeEEEeecceeEEEEcCCCcchHhhH--HHHHHHHhcCC
Q 047489 84 AVDVPAVAENVRYFAGAADKI--HGEVLK----M---SRELQAYTLREPIGVVGHIVPWNFPTFIFF--MKVSPTLAAGC 152 (288)
Q Consensus 84 ~~ev~~~~~~l~~~~~~~~~~--~~~~~~----~---~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~--~~~~~AL~aGN 152 (288)
. |+..+++.++|++..+++. .+.... . ..+...+..++|+|||++|+|||||+...+ +++++||++||
T Consensus 122 ~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN 200 (528)
T 3v4c_A 122 G-ERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGC 200 (528)
T ss_dssp H-HHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTC
T ss_pred H-HHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCC
Confidence 5 9999999999999988762 222211 0 023346789999999999999999999865 89999999999
Q ss_pred eEEEeCCCCChHHHHHHHHHH----HHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCC-
Q 047489 153 TMVVKPAEQTPLTALYCAHLA----KLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNL- 227 (288)
Q Consensus 153 ~vilkps~~~~~~~~~l~~~l----~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~- 227 (288)
+||+|||+.+|.++..+++++ .++|+|+|+++++++++.+.++.|+.||++|.|.||||+.+|+.|.+.++. ++
T Consensus 201 ~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~-~~~ 279 (528)
T 3v4c_A 201 PVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAA-RPE 279 (528)
T ss_dssp CEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHH-SSS
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhh-ccC
Confidence 999999999999999998865 568999999999999888899999999999999999999999999999988 77
Q ss_pred -cceEEeCCCCCceeecCCC---CHHHHHHHHHHHhhccCCcccccCceEEEeCC-chHHHHHhhC
Q 047489 228 -KPVSLEFGGKSPLLIFDDA---DVNTTADTALLGNLFNKGEICVASSRVYCQIK-WPSRWSKAAI 288 (288)
Q Consensus 228 -~~~~~e~gg~~~~iv~~~a---d~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~-~~~~f~~~l~ 288 (288)
+|+++|+|||||+||++|| |+|.|++.+++++|.|+||.|++++++|||++ +||+|+++|+
T Consensus 280 ~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~ 345 (528)
T 3v4c_A 280 PIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAV 345 (528)
T ss_dssp CCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHHHHHHHH
T ss_pred CCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHHHHHHHH
Confidence 8999999999999999999 88999999999999999999999999999998 9999999873
No 44
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=6.2e-58 Score=425.58 Aligned_cols=279 Identities=20% Similarity=0.287 Sum_probs=251.6
Q ss_pred ceecccCCCCceeEEEcCCCHHHHHHHHHHHHhh-cccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchh
Q 047489 2 TFETIDPRTGEAIARIAEGDKEDIDNAVKAARHA-FDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHS 80 (288)
Q Consensus 2 ~~~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a-~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~ 80 (288)
+++++||.||+++++++.++ +|++++++.|++| |. .|+.++..+|.++|+++++.|++++++|+++++.|+|||..
T Consensus 23 ~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 99 (534)
T 2y53_A 23 GITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGA--ALRALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRN 99 (534)
T ss_dssp CEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred eEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhh--hhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 47899999999999999987 9999999999999 58 89999999999999999999999999999999999999999
Q ss_pred HHhhccHHHHHHHHHHHHHhhhhhcCccc-------ccc--CCceeEEEeecc-eeEEEEcCCCcchHhhHHHHHHHHhc
Q 047489 81 WAKAVDVPAVAENVRYFAGAADKIHGEVL-------KMS--RELQAYTLREPI-GVVGHIVPWNFPTFIFFMKVSPTLAA 150 (288)
Q Consensus 81 ~a~~~ev~~~~~~l~~~~~~~~~~~~~~~-------~~~--~~~~~~~~~~p~-Gvv~~i~p~n~P~~~~~~~~~~AL~a 150 (288)
++.. |+...++.++||+...++..+... +.. .....+..++|+ |||++|+|||||+...++++++||++
T Consensus 100 ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaa 178 (534)
T 2y53_A 100 DSAV-DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLS 178 (534)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHT
T ss_pred HHHH-HHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHHHHHHHHHHHHHHc
Confidence 9875 999999999999988766543211 211 122357889997 99999999999999999999999999
Q ss_pred CCeEEEeCCCCChHHHHHHHHHHHHcC-CCCCceEEEeCCChhHHHHHHhC-CCCCEEEEeCCHHHHHHHHHHhh-cCCC
Q 047489 151 GCTMVVKPAEQTPLTALYCAHLAKLAG-IPDGVLNVVPGFGPTAGAAIASH-MDIDKVSFTGSTDVGRLVIQAAS-TSNL 227 (288)
Q Consensus 151 GN~vilkps~~~~~~~~~l~~~l~~ag-~p~~~v~~i~~~~~~~~~~l~~~-~~v~~v~f~Gs~~~~~~i~~~~~-~~~~ 227 (288)
||+||+|||+.+|.++..+++++.++| +|+|+++++++++.+ +..+ +++|.|.||||+.+|+.|.+.++ ..++
T Consensus 179 GN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~----l~~~l~~vd~V~FTGS~~~G~~i~~~aa~a~~~ 254 (534)
T 2y53_A 179 GVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAG----LLDQIRSFDVVSFTGSADTAATLRAHPAFVQRG 254 (534)
T ss_dssp TCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTT----SGGGCCTTCEEEEESCHHHHHHHHTSHHHHTTC
T ss_pred CCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHH----HHhcccccCEEEEECCHHHHHHHHHhhhhhcCC
Confidence 999999999999999999999999999 799999999985433 3332 57999999999999999998764 2278
Q ss_pred cceEEeCCCCCceeecCCC-----CHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 228 KPVSLEFGGKSPLLIFDDA-----DVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 228 ~~~~~e~gg~~~~iv~~~a-----d~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
+|+++|+|||||+||++|| |+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 255 k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 320 (534)
T 2y53_A 255 ARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALK 320 (534)
T ss_dssp CEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHH
T ss_pred CcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHHH
Confidence 9999999999999999999 999999999999999999999999999999999999999873
No 45
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=4.1e-56 Score=406.77 Aligned_cols=264 Identities=27% Similarity=0.383 Sum_probs=239.2
Q ss_pred CCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhHHhhccHHHHHHHHHHHH
Q 047489 19 EGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSWAKAVDVPAVAENVRYFA 98 (288)
Q Consensus 19 ~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~a~~~ev~~~~~~l~~~~ 98 (288)
..+.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..++...|+...++.+++++
T Consensus 14 ~~s~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 91 (469)
T 3sza_A 14 GSHMSKISEAVKRARAAFS--SGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMI 91 (469)
T ss_dssp ----CHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4567799999999999999 99999999999999999999999999999999999999999987669999999999887
Q ss_pred HhhhhhcCccc----cccCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCCCChHHHHHHHHHHH
Q 047489 99 GAADKIHGEVL----KMSRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAEQTPLTALYCAHLAK 174 (288)
Q Consensus 99 ~~~~~~~~~~~----~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~ 174 (288)
........... ....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~ 171 (469)
T 3sza_A 92 QKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIP 171 (469)
T ss_dssp HHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHH
T ss_pred HHHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH
Confidence 76655433221 11224467899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCCCceeecCCCCHHHHHHH
Q 047489 175 LAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGKSPLLIFDDADVNTTADT 254 (288)
Q Consensus 175 ~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~~~~iv~~~ad~~~a~~~ 254 (288)
++ +|+|+++++++ +.+....|+.| ++|.|.||||+.+|+.|.+.++. +++|+++|+|||||+||++|||+|.|++.
T Consensus 172 ~a-lP~gvv~vv~g-~~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~iV~~dADl~~Aa~~ 247 (469)
T 3sza_A 172 QY-LDKDLYPVING-GVPETTELLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRR 247 (469)
T ss_dssp HH-SCTTTSCBCCC-SHHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECTTSCHHHHHHH
T ss_pred Hh-CCcceEEEEEC-CHHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhh-ccCceEEecCCCCceEECCCCCHHHHHHH
Confidence 98 99999999998 55666778887 89999999999999999999988 88999999999999999999999999999
Q ss_pred HHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 255 ALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 255 i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 248 i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 281 (469)
T 3sza_A 248 IAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLK 281 (469)
T ss_dssp HHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHH
Confidence 9999999999999999999999999999999873
No 46
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=4e-56 Score=433.79 Aligned_cols=268 Identities=31% Similarity=0.426 Sum_probs=253.1
Q ss_pred EcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhHHhhccHHHHHHHHHH
Q 047489 17 IAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSWAKAVDVPAVAENVRY 96 (288)
Q Consensus 17 ~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~a~~~ev~~~~~~l~~ 96 (288)
++.++.++++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..++.. |+..+++.++|
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~ai~~lr~ 620 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFA--GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALS-ELREAADFCRY 620 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHH-HHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHH-HHHHHHHHHHH
Confidence 788999999999999999999 999999999999999999999999999999999999999999976 99999999999
Q ss_pred HHHhhhhhcCcc--ccccCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCCCChHHHHHHHHHHH
Q 047489 97 FAGAADKIHGEV--LKMSRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAEQTPLTALYCAHLAK 174 (288)
Q Consensus 97 ~~~~~~~~~~~~--~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~ 174 (288)
|+...++..+.. .+.+.+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.
T Consensus 621 ~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 621 YAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 999998876543 233456678899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcC--CCcceEEeCCCCCceeecCCCCHHHHH
Q 047489 175 LAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTS--NLKPVSLEFGGKSPLLIFDDADVNTTA 252 (288)
Q Consensus 175 ~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~--~~~~~~~e~gg~~~~iv~~~ad~~~a~ 252 (288)
++|+|+|+++++++++.. +..|+.||+|+.|.||||+.+|+.|.+.++++ +++|+++|+|||||+||++|||+|.|+
T Consensus 701 eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa 779 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA 779 (1001)
T ss_dssp HHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred HhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence 999999999999997666 99999999999999999999999999998863 479999999999999999999999999
Q ss_pred HHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 253 DTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 253 ~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
+.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 780 ~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~ 815 (1001)
T 3haz_A 780 DDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVA 815 (1001)
T ss_dssp HHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHH
Confidence 999999999999999999999999999999999873
No 47
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.6e-56 Score=405.52 Aligned_cols=267 Identities=16% Similarity=0.153 Sum_probs=222.2
Q ss_pred ecccCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhc-------C
Q 047489 4 ETIDPRTGEAIARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDA-------G 76 (288)
Q Consensus 4 ~~~~p~~g~~~~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~-------g 76 (288)
-++||.||+++++++.++.++++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+ |
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~G 87 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGR--MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLA 87 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSC
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCC
Confidence 3789999999999999999999999999999999 999999999999999999999999999999999999 6
Q ss_pred Cchh----HHhhccHHHHHHHHHHHHHhhhhhcCcccccc---CCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHh
Q 047489 77 KLHS----WAKAVDVPAVAENVRYFAGAADKIHGEVLKMS---RELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLA 149 (288)
Q Consensus 77 k~~~----~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~ 149 (288)
||.. ++. .|+..+++.++|++..+++..+...+.. .+...++.++|+|||++|+||| |.+.. +++++||+
T Consensus 88 k~~~~rl~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALa 164 (463)
T 2h5g_A 88 APLLKRLSLST-SKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIA 164 (463)
T ss_dssp HHHHHTTCCCH-HHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHH
T ss_pred CchhhhhhhhH-HHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHH
Confidence 9987 344 4999999999999988777666543321 3445689999999999999887 77776 89999999
Q ss_pred cCCeEEEeCCCCChHHHHHHHHHHHHc----CCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcC
Q 047489 150 AGCTMVVKPAEQTPLTALYCAHLAKLA----GIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTS 225 (288)
Q Consensus 150 aGN~vilkps~~~~~~~~~l~~~l~~a----g~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~ 225 (288)
+||+||+|||+.+|.++..+++++.++ | |+|+++++++ +.+.++.|..||++|.|.||||+.+|+.|.+.++
T Consensus 165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa-- 240 (463)
T 2h5g_A 165 SGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK-- 240 (463)
T ss_dssp HTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS--
T ss_pred cCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--
Confidence 999999999999999999999999998 9 9999999998 7778999999999999999999999999998876
Q ss_pred CCcceEEeCCCCCceeecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchH
Q 047489 226 NLKPVSLEFGGKSPLLIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPS 281 (288)
Q Consensus 226 ~~~~~~~e~gg~~~~iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~ 281 (288)
++|+++|+|||||+||++|||+|.|++.+++++|.| ||.|++++++|||+++||
T Consensus 241 -l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d 294 (463)
T 2h5g_A 241 -GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR 294 (463)
T ss_dssp -SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT
T ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc
Confidence 699999999999999999999999999999999999 999999999999999987
No 48
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=6e-54 Score=391.58 Aligned_cols=262 Identities=19% Similarity=0.256 Sum_probs=226.4
Q ss_pred EcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhHHhhccHHHHHHHH-H
Q 047489 17 IAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSWAKAVDVPAVAENV-R 95 (288)
Q Consensus 17 ~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~a~~~ev~~~~~~l-~ 95 (288)
++.++.++++++++.|++|++ .|+.++.++|.++|+++++.++++.++|+++++.|+||+..+++..++..+.+.+ +
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~ 78 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQE--EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN 78 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 456889999999999999999 9999999999999999999999999999999999999999998754666666666 3
Q ss_pred HHHHhhhhhcCccccccCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCCCChHHHHHHHHHHH-
Q 047489 96 YFAGAADKIHGEVLKMSRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAEQTPLTALYCAHLAK- 174 (288)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~- 174 (288)
++.. .+..+ ..+.+.+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.
T Consensus 79 ~~~~--~~~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~ 155 (452)
T 3my7_A 79 KYKD--EQTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD 155 (452)
T ss_dssp HHTT--CCCSE-EC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhh--ccccc-cccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHH
Confidence 3322 11111 1222234456889999999999999999999999999999999999999999999999998887765
Q ss_pred ---HcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCCCceeecCCCCHHHH
Q 047489 175 ---LAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGKSPLLIFDDADVNTT 251 (288)
Q Consensus 175 ---~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~~~~iv~~~ad~~~a 251 (288)
++|+|+|+++++++++.+.++.|+.||+++.|.||||+.+++ .++. +++|+++|+|||+|+||++|||+|.|
T Consensus 156 a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~-~~kp~~~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 156 AAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYS-SGKPAIGVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHT-SSSCEEECC--CEEEEECTTSCHHHH
T ss_pred HHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHh-cCCCEEecCCCCCeEEEeCCCCHHHH
Confidence 799999999999998888999999999999999999998654 3444 67999999999999999999999999
Q ss_pred HHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 252 ADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 252 ~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
++.+++++|+|+||.|++++++|||+++||+|+++|+
T Consensus 231 a~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~ 267 (452)
T 3my7_A 231 VASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFA 267 (452)
T ss_dssp HHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999873
No 49
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=3.3e-53 Score=387.90 Aligned_cols=264 Identities=20% Similarity=0.248 Sum_probs=227.9
Q ss_pred EEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchhHHhhccHHHHHHHH
Q 047489 15 ARIAEGDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHSWAKAVDVPAVAENV 94 (288)
Q Consensus 15 ~~~~~~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~~a~~~ev~~~~~~l 94 (288)
..++.++.++++++++.|++||. .|+.++..+|.++|+++++.|.++.++|+++++.|+||+..+++..+.....+.+
T Consensus 4 ~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~ 81 (464)
T 3k9d_A 4 EDKDLRSIQEVRNLIESANKAQK--ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHV 81 (464)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHH
Confidence 34566788999999999999999 9999999999999999999999999999999999999999887543444444444
Q ss_pred HHHHHhhhhhcCccccccCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCCCChHHHHHHHH---
Q 047489 95 RYFAGAADKIHGEVLKMSRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAEQTPLTALYCAH--- 171 (288)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~--- 171 (288)
..+....+. .+ ....+.+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++
T Consensus 82 ~~~~~~~~~-~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~ 159 (464)
T 3k9d_A 82 YNYIKDMKT-IG-MLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIIS 159 (464)
T ss_dssp HHHHTTCCC-SE-EEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHH
T ss_pred HHhhhcccc-cc-eeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHH
Confidence 433322211 11 1122345667889999999999999999999999999999999999999999999999997654
Q ss_pred -HHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCC-CCCceeecCCCCHH
Q 047489 172 -LAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFG-GKSPLLIFDDADVN 249 (288)
Q Consensus 172 -~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~g-g~~~~iv~~~ad~~ 249 (288)
++.++|+|+|+++++++++.+.++.|+.||++|.|.||||+.+ .+.++. +++|+ +|+| ||+|+||++|||++
T Consensus 160 ~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~-~~kpv-lelG~G~~p~iV~~dADl~ 233 (464)
T 3k9d_A 160 EAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYS-SGTPA-IGVGPGNGPAFIERSANIP 233 (464)
T ss_dssp HHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTT-SSSCE-EEBCCCCCEEEECTTSCHH
T ss_pred HHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHh-cCCcE-EeeCCCCCeEEECCCCCHH
Confidence 5688999999999999988889999999999999999999984 444555 77998 7787 99999999999999
Q ss_pred HHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 250 TTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 250 ~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
.|++.+++++|+|+||.|++++++|||+++||+|+++|+
T Consensus 234 ~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~ 272 (464)
T 3k9d_A 234 RAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFR 272 (464)
T ss_dssp HHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999873
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=5.1e-52 Score=377.81 Aligned_cols=257 Identities=19% Similarity=0.218 Sum_probs=219.5
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCchh----HHhh-------ccHHHH
Q 047489 22 KEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLHS----WAKA-------VDVPAV 90 (288)
Q Consensus 22 ~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~~----~a~~-------~ev~~~ 90 (288)
.++++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+||+.. ++.. .|+..+
T Consensus 25 ~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~ 102 (444)
T 4ghk_A 25 DQYMTDVGRRARRASR--SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTM 102 (444)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHH
Confidence 5789999999999999 99999999999999999999999999999999999999853 4332 378899
Q ss_pred HHHHHHHHHhhhhhcCccccc---cCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCCCChHHHH
Q 047489 91 AENVRYFAGAADKIHGEVLKM---SRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAEQTPLTAL 167 (288)
Q Consensus 91 ~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~ 167 (288)
++.+++++.+.+.. +...+. +.+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++.
T Consensus 103 ~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 179 (444)
T 4ghk_A 103 VEGLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNT 179 (444)
T ss_dssp HHHHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 99999999877543 333322 23556789999999999999998 8 688999999999999999999999999999
Q ss_pred HHHHHH----HHcCCCCCceEEEeCCCh-hHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCCCceee
Q 047489 168 YCAHLA----KLAGIPDGVLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGKSPLLI 242 (288)
Q Consensus 168 ~l~~~l----~~ag~p~~~v~~i~~~~~-~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~~~~iv 242 (288)
.+++++ .++|+|+|+++++++++. ..++.|..||++|.|.||||+.+++.+.+.+ ++|+++|+|||||+||
T Consensus 180 ~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV 255 (444)
T 4ghk_A 180 ALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYV 255 (444)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEE
Confidence 999987 789999999999998555 4677787899999999999999999998764 5899999999999999
Q ss_pred cCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhhC
Q 047489 243 FDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAAI 288 (288)
Q Consensus 243 ~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 288 (288)
++|||+|.|++.+++++|.|+| .|++++++|||+++||+|+++|+
T Consensus 256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~ 300 (444)
T 4ghk_A 256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLG 300 (444)
T ss_dssp CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHH
Confidence 9999999999999999999999 99999999999999999999873
No 51
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=1.1e-51 Score=373.86 Aligned_cols=257 Identities=16% Similarity=0.200 Sum_probs=228.9
Q ss_pred CHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCch----hHHhh-------ccHHH
Q 047489 21 DKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLH----SWAKA-------VDVPA 89 (288)
Q Consensus 21 ~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~----~~a~~-------~ev~~ 89 (288)
-.++++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+||+. .++.. .|+..
T Consensus 12 ~~~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~ 89 (427)
T 1o20_A 12 HMDELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDE 89 (427)
T ss_dssp --CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHH
Confidence 35789999999999999 9999999999999999999999999999999999999885 45431 48999
Q ss_pred HHHHHHHHHHhhhhhcCccccc---cCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCCCChHHH
Q 047489 90 VAENVRYFAGAADKIHGEVLKM---SRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAEQTPLTA 166 (288)
Q Consensus 90 ~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~ 166 (288)
+++.+++|+.+.++ .+...+. +.+...+..++|+|||++|+||| +...++++++||++||+||+|||+.+|.++
T Consensus 90 ~~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~ 166 (427)
T 1o20_A 90 MIKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSN 166 (427)
T ss_dssp HHHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHH
T ss_pred HHHHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHH
Confidence 99999999987765 3333221 22445688999999999999765 578899999999999999999999999999
Q ss_pred HHHHHHHH----HcCCCCCceEEEeCC-ChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCCCcee
Q 047489 167 LYCAHLAK----LAGIPDGVLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGKSPLL 241 (288)
Q Consensus 167 ~~l~~~l~----~ag~p~~~v~~i~~~-~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~~~~i 241 (288)
..+++++. ++|+|+|++++++++ ....++.|..||++|.|.||||+.+|+.|.+.+ .+|+++|+|||||+|
T Consensus 167 ~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~i 242 (427)
T 1o20_A 167 KAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIF 242 (427)
T ss_dssp HHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEE
Confidence 99999997 689999999999984 345678888899999999999999999999876 489999999999999
Q ss_pred ecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhh
Q 047489 242 IFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAA 287 (288)
Q Consensus 242 v~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l 287 (288)
|++|||+|.|++.+++++|.|+| .|++++++|||+++||+|+++|
T Consensus 243 V~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l 287 (427)
T 1o20_A 243 VDESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVI 287 (427)
T ss_dssp ECTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHH
Confidence 99999999999999999999999 9999999999999999999987
No 52
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=4.8e-52 Score=379.53 Aligned_cols=253 Identities=17% Similarity=0.217 Sum_probs=225.3
Q ss_pred HHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCch----hHHhhccHHH-HHHHHHHHH
Q 047489 24 DIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDAGKLH----SWAKAVDVPA-VAENVRYFA 98 (288)
Q Consensus 24 ~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~gk~~----~~a~~~ev~~-~~~~l~~~~ 98 (288)
.++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||. .++...|+.. +++.+++++
T Consensus 15 ~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a 92 (468)
T 1vlu_A 15 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML 92 (468)
T ss_dssp HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred hHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHH
Confidence 47899999999999 9999999999999999999999999999999999999998 7775458888 888899888
Q ss_pred Hhhhhhc------Cccccc---cCCceeEEEeecceeEEEEcCCCcchHhhHHHHHHHHhcCCeEEEeCCCCChHHHHHH
Q 047489 99 GAADKIH------GEVLKM---SRELQAYTLREPIGVVGHIVPWNFPTFIFFMKVSPTLAAGCTMVVKPAEQTPLTALYC 169 (288)
Q Consensus 99 ~~~~~~~------~~~~~~---~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l 169 (288)
...++.. +...+. +.+...+..++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..+
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 170 (468)
T 1vlu_A 93 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREM 170 (468)
T ss_dssp HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHH
Confidence 8777665 332221 12445689999999999999999 9 89999999999999999999999999999999
Q ss_pred HHHHH----H----cCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCCCCCcee
Q 047489 170 AHLAK----L----AGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFGGKSPLL 241 (288)
Q Consensus 170 ~~~l~----~----ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~gg~~~~i 241 (288)
++++. + +|+|+|++++++ ++.+.++.|..||++|.|.||||+.+|+.|.+.+ ++|+++|+|||||+|
T Consensus 171 ~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~i 245 (468)
T 1vlu_A 171 AKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIY 245 (468)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEE
T ss_pred HHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceE
Confidence 99995 8 999999999999 5667889999999999999999999999999865 589999999999999
Q ss_pred ecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCCchHHHHHhh
Q 047489 242 IFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIKWPSRWSKAA 287 (288)
Q Consensus 242 v~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l 287 (288)
|++|||+|.|++.+++++|.|+| .|++++++|||+++ |+|+++|
T Consensus 246 V~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l 289 (468)
T 1vlu_A 246 LDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVL 289 (468)
T ss_dssp ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHH
T ss_pred ECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHH
Confidence 99999999999999999999999 99999999999999 9999976
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=94.12 E-value=2.8 Score=36.86 Aligned_cols=223 Identities=15% Similarity=0.157 Sum_probs=117.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhc-CCc------hhHHhh--------------ccHHHHHHHHHHHH
Q 047489 40 PWPRFSGAQRRRIMLKFADIIEEHLEELAVLEALDA-GKL------HSWAKA--------------VDVPAVAENVRYFA 98 (288)
Q Consensus 40 ~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~~~-gk~------~~~a~~--------------~ev~~~~~~l~~~~ 98 (288)
.|+..+..+-.+.++.+.+.++++.++-....+... |.. +.-... ..+..+.+.++.|.
T Consensus 26 ~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs~~ei~~A~~~l~~~~~~ai~~A~~~I~~fh 105 (423)
T 4gic_A 26 AWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELPRDVLEAAWQALPAEQAKALREAAERIRAYA 105 (423)
T ss_dssp CCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEECHHHHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred cccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 345555566666677777777766665444443332 110 000000 12333444444443
Q ss_pred HhhhhhcCccccccCCceeEEEeecceeEEEEcCC---CcchHhhHHHHHHHHhcCCeE-EEeCCCCChHHHHHHHHHHH
Q 047489 99 GAADKIHGEVLKMSRELQAYTLREPIGVVGHIVPW---NFPTFIFFMKVSPTLAAGCTM-VVKPAEQTPLTALYCAHLAK 174 (288)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~---n~P~~~~~~~~~~AL~aGN~v-ilkps~~~~~~~~~l~~~l~ 174 (288)
.... ...-.....+|......+.|+-.|++..|+ .|| +++++..+||..+|..= |+..++......-.+..+..
T Consensus 106 ~~Q~-~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~AA~ 183 (423)
T 4gic_A 106 ERQK-LDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYP-SSVLMNAVPAKVAGVPELIMAVPAPRGELNALVLAAAY 183 (423)
T ss_dssp HHHC-CCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCH-HHHHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHHHHH
T ss_pred Hhcc-cCCcccccCCCCEEEEEEEEecceeEEeeCCCCchh-hHHHHhhccHHHhCCCeEEEecCCCCCCccHHHHHHHH
Confidence 2111 111111223456667889999999999995 355 44466789999999973 33333322223334444556
Q ss_pred HcCCCCCceEEEeCCChhHHHHHHh----CCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeC-CCCCc--eeecCCCC
Q 047489 175 LAGIPDGVLNVVPGFGPTAGAAIAS----HMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEF-GGKSP--LLIFDDAD 247 (288)
Q Consensus 175 ~ag~p~~~v~~i~~~~~~~~~~l~~----~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~-gg~~~--~iv~~~ad 247 (288)
.+|..+ |--+ | |.+.-.+|.- -|.+|.|+=.|..=+... .+...+ .+-+.+ .|.+= +|.++++|
T Consensus 184 l~Gv~e--Iy~v-G-GAQAIAAlAyGTetI~~VDkIvGPGN~yVa~A-Kr~v~g----~VgIDm~AGPSEilViAD~~a~ 254 (423)
T 4gic_A 184 ISGVDR--VFRI-G-GAQAVAALAYGTETVPRVDKIVGPGNIYVATA-KKLVFG----QVGIDMVAGPSEILVISDGRTD 254 (423)
T ss_dssp HHTCCE--EECC-C-HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH-HHHHBT----TBEECCCCCCCEEEEEECSCSC
T ss_pred hcCCcE--EEEc-C-ChhhhhhhccCCCcccceeEEecCCcHHHHHH-HHHhcC----CcCcccccccceEEEEeCCCCC
Confidence 677753 2212 2 4444444443 688999998898866433 333333 222222 23332 44455699
Q ss_pred HHHHHHHHHHHhhccCCcccccCceEEEeCC
Q 047489 248 VNTTADTALLGNLFNKGEICVASSRVYCQIK 278 (288)
Q Consensus 248 ~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~ 278 (288)
.+..+.+++-.+=.... .+.++|..+
T Consensus 255 p~~vAaDLlsQAEHd~~-----a~~iLvT~s 280 (423)
T 4gic_A 255 PDWIAMDLFSQAEHDED-----AQAILISPD 280 (423)
T ss_dssp HHHHHHHHHHHHTTCTT-----CEEEEEESC
T ss_pred HHHHHHHHHHhhccCCC-----CeEEEEeCc
Confidence 99999888866544333 455666444
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=88.19 E-value=13 Score=32.77 Aligned_cols=178 Identities=22% Similarity=0.236 Sum_probs=98.0
Q ss_pred cHHHHHHHHHHHHHhhhhhcCccccccCCceeEEEeecceeEEEEcCC---CcchHhhHHHHHHHHhcCCeEEEeCCCCC
Q 047489 86 DVPAVAENVRYFAGAADKIHGEVLKMSRELQAYTLREPIGVVGHIVPW---NFPTFIFFMKVSPTLAAGCTMVVKPAEQT 162 (288)
Q Consensus 86 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~---n~P~~~~~~~~~~AL~aGN~vilkps~~~ 162 (288)
.+..+.+.++.|-....+ .........|......+.|+..|++..|+ -|| +++++..+||-.+|..=|+-.+|..
T Consensus 87 ai~~A~~nI~~fH~~Q~~-~~~~~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~ 164 (434)
T 1kae_A 87 AMAVAVKNIETFHTAQKL-PPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLF-STVLMLATPASIAGCKKVVLCSPPP 164 (434)
T ss_dssp HHHHHHHHHHHHHHTTCC-CCEEEEEETTEEEEEEEEECSEEEEECCCSSSCCT-HHHHHHHHHHHHHTCSEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHhcC-CCceEEecCCcEEEEEEeehheEEEEecCCCCCch-hHHHHhhccHhhcCCCeEEEECCCC
Confidence 455566666655432211 11011122355567889999999999886 344 4457778999999998765444321
Q ss_pred hHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHH----hCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeC-CCC
Q 047489 163 PLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIA----SHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEF-GGK 237 (288)
Q Consensus 163 ~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~----~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~-gg~ 237 (288)
..-.+.-+.+.+|..+ |--+ | |.+.-.+|. +-|.+|.|+=.|..=+... .+.... .+..+-+.+ .|.
T Consensus 165 --i~p~iL~AA~l~Gv~e--Iy~v-G-GAQAIAAlAyGTetIp~VDkI~GPGN~yVa~A-Kr~Vs~-~~G~VgIDm~AGP 236 (434)
T 1kae_A 165 --IADEILYAAQLCGVQD--VFNV-G-GAQAIAALAFGTESVPKVDKIFGPGNAFVTEA-KRQVSQ-RLDGAAIDMPAGP 236 (434)
T ss_dssp --CCHHHHHHHHHTTCCE--EEEC-C-HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH-HHHHHH-CTTSCEESCCCCC
T ss_pred --CCHHHHHHHHHcCCCE--Eeec-c-cHHHHHHHHcCCCCCCCccEEECCCcHHHHHH-HHHhHh-hcCccccCCCCCC
Confidence 2223334456677753 2222 2 333333333 2588999988888765433 233311 111233332 233
Q ss_pred Cc--eeecCCCCHHHHHHHHHHHhhccCCcccccCceEEEeCC
Q 047489 238 SP--LLIFDDADVNTTADTALLGNLFNKGEICVASSRVYCQIK 278 (288)
Q Consensus 238 ~~--~iv~~~ad~~~a~~~i~~~~~~~~Gq~C~~~~~v~V~~~ 278 (288)
+= +|.+++||.+..+.+++-.+=.... .+.++|-.+
T Consensus 237 SEilViAD~tAnp~~vAaDLLsQAEHd~~-----a~aiLvT~s 274 (434)
T 1kae_A 237 SEVLVIADSGATPDFVASDLLSQAEHGPD-----SQVILLTPA 274 (434)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHHTTCTT-----CEEEEEESC
T ss_pred ceEEEEeCCCCCHHHHHHHHHHHhccCCC-----CcEEEEECC
Confidence 33 4445679999999888765543332 455666433
No 55
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=64.34 E-value=9.7 Score=30.54 Aligned_cols=45 Identities=13% Similarity=0.222 Sum_probs=33.1
Q ss_pred HHHHHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCceEEEeC
Q 047489 141 FMKVSPTLAAGCTMVVKPAEQTPLTALYCAHLAKLAGIPDGVLNVVPG 188 (288)
Q Consensus 141 ~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~v~~i~~ 188 (288)
+..++-.+.+||.||++.++. .....+..+|..- +|.+++.+...
T Consensus 21 F~~l~~~vl~GnQiIVrg~~~--~~~~s~~~~L~~l-LP~~c~~l~~~ 65 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRDV--DLVQSAFEVLRTM-LPVGCVRIIPY 65 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSCH--HHHHHHHHHHGGG-SCGGGCCEEEE
T ss_pred HHHHHHHHhcCCEEEEEcCCH--HHHHHHHHHHHHh-CCHHHHhcccc
Confidence 455666788999999996654 4555556666665 99999998854
No 56
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=63.85 E-value=21 Score=27.45 Aligned_cols=39 Identities=23% Similarity=0.291 Sum_probs=31.0
Q ss_pred HhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCceEEEeCC
Q 047489 148 LAAGCTMVVKPAEQTPLTALYCAHLAKLAGIPDGVLNVVPGF 189 (288)
Q Consensus 148 L~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~v~~i~~~ 189 (288)
-..||-+|+|-.|.. +..++.++...++|++++-.+.|+
T Consensus 114 ~~~~nlvVIkT~PG~---A~~vA~~ID~~~~~e~IlGTIAGD 152 (180)
T 3v4g_A 114 DHNQALVVIHTGPGA---AQLIARMLDSLGKSEGILGVVAGD 152 (180)
T ss_dssp EECSSCEEEEESTTC---HHHHHHHHHHHCGGGTEEEEEECS
T ss_pred eecCCEEEEEeCCCc---HHHHHHHHHhCCCCCCeEEEEecC
Confidence 347999999866654 678888888888988888888874
No 57
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=59.29 E-value=27 Score=21.10 Aligned_cols=47 Identities=15% Similarity=0.258 Sum_probs=35.8
Q ss_pred CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 047489 20 GDKEDIDNAVKAARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLEA 72 (288)
Q Consensus 20 ~~~~~~~~a~~~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~ 72 (288)
.+.++..+.+...-+|-+.|+|..- .+|+-++.-|.+-++.++..+.
T Consensus 5 lt~eq~~aILkaLdeaIe~GPWe~S------NFLRvIGKnL~eIRd~F~~~i~ 51 (57)
T 3fxd_A 5 LSDEQKETILKALNDAIEKGPWDKS------NFLRVIGKKLIAIRDRFLKRIG 51 (57)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCTTSC------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHcCCchHH------HHHHHHHHhHHHHHHHHHHHhc
Confidence 4667777777777778788899865 5588888888888888877653
No 58
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=57.02 E-value=23 Score=26.49 Aligned_cols=114 Identities=17% Similarity=0.139 Sum_probs=70.7
Q ss_pred eeEEEEc-CCCcchHhhHHHHHHHHhcCCeEEEeCCCCChHHHHHHHHHHHH-cCCCCCceEEEeC-CChhHHHHHHhCC
Q 047489 125 GVVGHIV-PWNFPTFIFFMKVSPTLAAGCTMVVKPAEQTPLTALYCAHLAKL-AGIPDGVLNVVPG-FGPTAGAAIASHM 201 (288)
Q Consensus 125 Gvv~~i~-p~n~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~-ag~p~~~v~~i~~-~~~~~~~~l~~~~ 201 (288)
|.++++. ...-+-...+..-...++.|..++-- .-|+ +.|.+ .|++-..++-++. -++++.+ ++...
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT-----~gTa----~~L~e~~Gl~v~~v~k~~eGG~p~I~d-~I~~g 81 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYAT-----GTTG----NLISRATGMNVNAMLSGPMGGDQQVGA-LISEG 81 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEE-----TTHH----HHHHHHHCCCCEEECCGGGTHHHHHHH-HHHTT
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEc-----cHHH----HHHHHHhCceeEEEEecCCCCCchHHH-HHHCC
Confidence 6454443 34445555566666677789987763 2333 44555 7998655543322 1233444 44557
Q ss_pred CCCEEEEeCC-------HHHHHHHHHHhhcCCCcceEEeCCCCCceeecCCCCHHHHHHHHHHHhhccCC
Q 047489 202 DIDKVSFTGS-------TDVGRLVIQAASTSNLKPVSLEFGGKSPLLIFDDADVNTTADTALLGNLFNKG 264 (288)
Q Consensus 202 ~v~~v~f~Gs-------~~~~~~i~~~~~~~~~~~~~~e~gg~~~~iv~~~ad~~~a~~~i~~~~~~~~G 264 (288)
+++.|+|+-. ...+..|.+.+.. +.+|+.-. -..++.++.+.+++..
T Consensus 82 eIdlVInt~~pl~~~~h~~D~~~IrR~A~~-~~IP~~T~---------------latA~a~v~ai~~~~~ 135 (152)
T 1b93_A 82 KIDVLIFFWDPLNAVPHDPDVKALLRLATV-WNIPVATN---------------VATADFIIQSPHFNDA 135 (152)
T ss_dssp CCCEEEEECCTTSCCTTHHHHHHHHHHHHH-TTCCEESS---------------HHHHHHHHTSGGGGSC
T ss_pred CccEEEEcCCcccCCcccccHHHHHHHHHH-cCCCEEeC---------------HHHHHHHHHHHhcccc
Confidence 9999999866 4567788888888 44677652 2455666777777665
No 59
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=47.61 E-value=29 Score=25.42 Aligned_cols=62 Identities=11% Similarity=0.028 Sum_probs=41.9
Q ss_pred HHHHHHcCCCCCceEEEeCC-C----hhHHHHHHhCCCCCEEEEeCCH-----HHHHHHHHHhhcCCCcceEEe
Q 047489 170 AHLAKLAGIPDGVLNVVPGF-G----PTAGAAIASHMDIDKVSFTGST-----DVGRLVIQAASTSNLKPVSLE 233 (288)
Q Consensus 170 ~~~l~~ag~p~~~v~~i~~~-~----~~~~~~l~~~~~v~~v~f~Gs~-----~~~~~i~~~~~~~~~~~~~~e 233 (288)
.+.|.+.|+|-..|.-++.. + ++..+.+. +.+++.|+++-+. ..+..|.|.+.. +.+|++-.
T Consensus 60 a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~-~g~i~lVInt~~~~~~~~~d~~~iRR~Av~-~~IP~~T~ 131 (143)
T 2yvq_A 60 SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIR-DGSIDLVINLPNNNTKFVHDNYVIRRTAVD-SGIPLLTN 131 (143)
T ss_dssp HHHHHHTTCCCEEECCGGGC-----CBCHHHHHH-TTSCCEEEECCCCCGGGHHHHHHHHHHHHH-TTCCEECS
T ss_pred HHHHHHcCCeEEEEEeccCCCcccccccHHHHHH-CCCceEEEECCCCCCcCCccHHHHHHHHHH-hCCCeEcC
Confidence 45567889997766655542 2 45555554 5689999997554 367778888888 55777753
No 60
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=43.19 E-value=43 Score=27.37 Aligned_cols=60 Identities=8% Similarity=0.035 Sum_probs=40.8
Q ss_pred CCCCEEEEeCCHHHHHHHHHHhhcC-CCcc-eEEeCCCCCceeecCCCCHHHHHHHHHHHhh
Q 047489 201 MDIDKVSFTGSTDVGRLVIQAASTS-NLKP-VSLEFGGKSPLLIFDDADVNTTADTALLGNL 260 (288)
Q Consensus 201 ~~v~~v~f~Gs~~~~~~i~~~~~~~-~~~~-~~~e~gg~~~~iv~~~ad~~~a~~~i~~~~~ 260 (288)
.+.|.|+..|++.+-....+.+... ..+| +-+.+|-.+.+-=....|++.+++.++.+.+
T Consensus 34 ~~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G~lgfl~~~~~~~~~~~l~~l~~g~~ 95 (272)
T 2i2c_A 34 VEPEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTGHLGFYADWRPAEADKLVKLLAKGEY 95 (272)
T ss_dssp SSCSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESSSCCSSCCBCGGGHHHHHHHHHTTCC
T ss_pred CCCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCCCCCcCCcCCHHHHHHHHHHHHcCCC
Confidence 5689999999999999888888652 1356 4455554442211134678999999887743
No 61
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=42.25 E-value=9.2 Score=27.97 Aligned_cols=86 Identities=16% Similarity=0.135 Sum_probs=50.5
Q ss_pred chHhhHHHHHHHHhcCCeEEEeCCCCChHHHHHHHHHHHH-cCCCCCceEEEe-CCChhHHHHHHhCCCCCEEEEeCC--
Q 047489 136 PTFIFFMKVSPTLAAGCTMVVKPAEQTPLTALYCAHLAKL-AGIPDGVLNVVP-GFGPTAGAAIASHMDIDKVSFTGS-- 211 (288)
Q Consensus 136 P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~-ag~p~~~v~~i~-~~~~~~~~~l~~~~~v~~v~f~Gs-- 211 (288)
+-...+..-...++.|..++-- .-|+ +.|.+ .|++-..+.-++ +-++++.+ ++...+++.|+||-.
T Consensus 16 ~~~v~~a~~~~~ll~Gf~l~AT-----~gTa----~~L~e~~Gl~v~~v~k~~~eG~p~I~d-~I~~geIdlVInt~~pl 85 (134)
T 2xw6_A 16 EEMVAFCQRHREVLARFPLVAT-----GTTG----RRIEEATGLTVEKLLSGPLGGDQQMGA-RVAEGRILAVIFFRDPL 85 (134)
T ss_dssp HHHHHHHHHTHHHHTTSCEEEC-----HHHH----HHHHHHHCCCCEECSCGGGTHHHHHHH-HHHTTCEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCEEEEc-----cHHH----HHHHHhhCceEEEEEecCCCCcchHHH-HHHCCCccEEEEccCcc
Confidence 3333344444455567766542 2333 44555 799876665444 31334444 445579999999877
Q ss_pred -----HHHHHHHHHHhhcCCCcceEE
Q 047489 212 -----TDVGRLVIQAASTSNLKPVSL 232 (288)
Q Consensus 212 -----~~~~~~i~~~~~~~~~~~~~~ 232 (288)
...+..|.+.+.. +.+|+.-
T Consensus 86 ~~~~h~~D~~~IrR~A~~-~~IP~~T 110 (134)
T 2xw6_A 86 TAQPHEPDVQALLRVCDV-HGVPLAT 110 (134)
T ss_dssp TCCTTSCCSHHHHHHHHH-HTCCEEC
T ss_pred cCCCccchHHHHHHHHHH-cCCCeEc
Confidence 2345668888877 4466664
No 62
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=41.32 E-value=1e+02 Score=23.57 Aligned_cols=118 Identities=17% Similarity=0.095 Sum_probs=72.0
Q ss_pred eecc-eeEEEEcC-CCcchHhhHHHHHHHHhcCCeEEEeCCCCChHHHHHHHHHHHH-cCCCCCceEEEeC-CChhHHHH
Q 047489 121 REPI-GVVGHIVP-WNFPTFIFFMKVSPTLAAGCTMVVKPAEQTPLTALYCAHLAKL-AGIPDGVLNVVPG-FGPTAGAA 196 (288)
Q Consensus 121 ~~p~-Gvv~~i~p-~n~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~-ag~p~~~v~~i~~-~~~~~~~~ 196 (288)
.-|. |.++++.. ..-+-...+..-...++.|..++-- .-|+ +.|.+ .|+|-..++-++. -++++.+
T Consensus 23 ~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~AT-----~gTa----~~L~e~~Gl~v~~v~k~~eGG~pqI~d- 92 (178)
T 1vmd_A 23 FMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYAT-----GTTG----ALLQEKLGLKVHRLKSGPLGGDQQIGA- 92 (178)
T ss_dssp EECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEEC-----HHHH----HHHHHHHCCCCEECSCGGGTHHHHHHH-
T ss_pred eCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEEc-----hHHH----HHHHHHhCceeEEEeecCCCCCchHHH-
Confidence 3343 75555544 4445555566666677789987752 3333 45555 7998655543322 1233444
Q ss_pred HHhCCCCCEEEEeCC-------HHHHHHHHHHhhcCCCcceEEeCCCCCceeecCCCCHHHHHHHHHHHhhccCC
Q 047489 197 IASHMDIDKVSFTGS-------TDVGRLVIQAASTSNLKPVSLEFGGKSPLLIFDDADVNTTADTALLGNLFNKG 264 (288)
Q Consensus 197 l~~~~~v~~v~f~Gs-------~~~~~~i~~~~~~~~~~~~~~e~gg~~~~iv~~~ad~~~a~~~i~~~~~~~~G 264 (288)
++....++.|+||-. ...+..|.+.+.. ..+|+.-. -..++.++.+.+++..
T Consensus 93 ~I~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~-~~IP~~Tn---------------latA~A~v~ail~~~~ 151 (178)
T 1vmd_A 93 MIAEGKIDVLIFFWDPLEPQAHDVDVKALIRIATV-YNIPVAIT---------------RSTADFLISSPLMNDV 151 (178)
T ss_dssp HHHTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHH-TTCCEESS---------------HHHHHHHHHSGGGGSC
T ss_pred HHHCCCccEEEEccCccCCCcccccHHHHHHHHHH-cCCCEEeC---------------HHHHHHHHHHHhcccc
Confidence 445579999999876 3346778888888 44677653 2345666777776665
No 63
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=40.50 E-value=36 Score=25.56 Aligned_cols=51 Identities=18% Similarity=0.214 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhC--CCCCEEEEeCCHHHHH
Q 047489 165 TALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASH--MDIDKVSFTGSTDVGR 216 (288)
Q Consensus 165 ~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~--~~v~~v~f~Gs~~~~~ 216 (288)
....+.+.+.+.|...-...+++.+ ....+.+... .+.|.|+.+|+...+.
T Consensus 28 n~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g~ 80 (164)
T 3pzy_A 28 CGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIAP 80 (164)
T ss_dssp HHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred HHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 4556778888888877667788775 5566555432 3689999999875543
No 64
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=40.36 E-value=1.1e+02 Score=25.73 Aligned_cols=103 Identities=12% Similarity=0.056 Sum_probs=60.0
Q ss_pred EEEeCCCCC---hHHHHHHHHHHHHcCCCCCceEEEeCCCh-hHH---HHHHhCCCCCEEEEeCCHHHHHHHHHHh--hc
Q 047489 154 MVVKPAEQT---PLTALYCAHLAKLAGIPDGVLNVVPGFGP-TAG---AAIASHMDIDKVSFTGSTDVGRLVIQAA--ST 224 (288)
Q Consensus 154 vilkps~~~---~~~~~~l~~~l~~ag~p~~~v~~i~~~~~-~~~---~~l~~~~~v~~v~f~Gs~~~~~~i~~~~--~~ 224 (288)
+|+.|.... ......+.+.|.+.|+. +.+...... +.. .... ..+.|.|+..|++.+...+.+.+ ..
T Consensus 29 vI~NP~sg~~~~~~~~~~i~~~L~~~g~~---~~~~~t~~~~~a~~~~~~~~-~~~~d~vvv~GGDGTv~~v~~~l~~~~ 104 (337)
T 2qv7_A 29 IIYNPTSGKEQFKRELPDALIKLEKAGYE---TSAYATEKIGDATLEAERAM-HENYDVLIAAGGDGTLNEVVNGIAEKP 104 (337)
T ss_dssp EEECTTSTTSCHHHHHHHHHHHHHHTTEE---EEEEECCSTTHHHHHHHHHT-TTTCSEEEEEECHHHHHHHHHHHTTCS
T ss_pred EEECCCCCCCchHHHHHHHHHHHHHcCCe---EEEEEecCcchHHHHHHHHh-hcCCCEEEEEcCchHHHHHHHHHHhCC
Confidence 555665542 13345667777877764 444433221 221 2222 25679999999999999988888 33
Q ss_pred CCCcc-eEEeCCCCCcee-ec-CCCCHHHHHHHHHHHhhc
Q 047489 225 SNLKP-VSLEFGGKSPLL-IF-DDADVNTTADTALLGNLF 261 (288)
Q Consensus 225 ~~~~~-~~~e~gg~~~~i-v~-~~ad~~~a~~~i~~~~~~ 261 (288)
.. .| .++-+|--|-+. .. -..|++.+++.++.+.+.
T Consensus 105 ~~-~pl~iIP~GT~N~lAr~Lg~~~~~~~al~~i~~g~~~ 143 (337)
T 2qv7_A 105 NR-PKLGVIPMGTVNDFGRALHIPNDIMGALDVIIEGHST 143 (337)
T ss_dssp SC-CEEEEEECSSCCHHHHHTTCCSSHHHHHHHHHHTCEE
T ss_pred CC-CcEEEecCCcHhHHHHHcCCCCCHHHHHHHHHcCCcE
Confidence 22 33 344444333222 21 245899999999887654
No 65
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=40.19 E-value=51 Score=21.37 Aligned_cols=36 Identities=25% Similarity=0.389 Sum_probs=27.7
Q ss_pred cCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCceEEEeCC
Q 047489 150 AGCTMVVKPAEQTPLTALYCAHLAKLAGIPDGVLNVVPGF 189 (288)
Q Consensus 150 aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~v~~i~~~ 189 (288)
++|-+|+|-.|. .+..++.++.+.++|+ ++-.+.|+
T Consensus 20 ~~n~vVikT~PG---~A~~vA~~iD~~~~~e-IlGTIAGD 55 (79)
T 2zfz_A 20 SGNLAVLRTPPG---AAHYLASAIDRAALPQ-VVGTIAGD 55 (79)
T ss_dssp ETTEEEEECSTT---CHHHHHHHHHHHCCTT-EEEEEECS
T ss_pred cCCEEEEEeCCC---cHHHHHHHHHhCCCCC-eEEEEecC
Confidence 799999986655 4678888888887765 77777773
No 66
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=39.19 E-value=1.7e+02 Score=24.45 Aligned_cols=103 Identities=13% Similarity=0.132 Sum_probs=60.3
Q ss_pred EEEeCCCCChHHHHHHHHHHHHcCCCCCceEEEeCCCh-hH---HHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcC---C
Q 047489 154 MVVKPAEQTPLTALYCAHLAKLAGIPDGVLNVVPGFGP-TA---GAAIASHMDIDKVSFTGSTDVGRLVIQAASTS---N 226 (288)
Q Consensus 154 vilkps~~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~-~~---~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~---~ 226 (288)
+|+.|..........+.+.|.+.|.. +.+...... +. ...... .+.|.|+..|++.+-..+.+.+..+ .
T Consensus 34 vi~Np~sg~~~~~~~i~~~l~~~g~~---~~~~~t~~~~~~~~~~~~~~~-~~~d~vvv~GGDGTl~~v~~~l~~~~~~~ 109 (332)
T 2bon_A 34 LILNGKSTDNLPLREAIMLLREEGMT---IHVRVTWEKGDAARYVEEARK-FGVATVIAGGGDGTINEVSTALIQCEGDD 109 (332)
T ss_dssp EEECSSSTTCHHHHHHHHHHHTTTCC---EEEEECCSTTHHHHHHHHHHH-HTCSEEEEEESHHHHHHHHHHHHHCCSSC
T ss_pred EEECCCCCCCchHHHHHHHHHHcCCc---EEEEEecCcchHHHHHHHHHh-cCCCEEEEEccchHHHHHHHHHhhcccCC
Confidence 45566554333445566777777764 444433211 11 122222 3578999999999999988888721 2
Q ss_pred CcceE-EeCCCCC-cee-ecCCCCHHHHHHHHHHHhh
Q 047489 227 LKPVS-LEFGGKS-PLL-IFDDADVNTTADTALLGNL 260 (288)
Q Consensus 227 ~~~~~-~e~gg~~-~~i-v~~~ad~~~a~~~i~~~~~ 260 (288)
..|+. +-+|--| ..- +.-..|++.+++.++.+.+
T Consensus 110 ~~plgiiP~Gt~N~fa~~l~i~~~~~~al~~i~~g~~ 146 (332)
T 2bon_A 110 IPALGILPLGTANDFATSVGIPEALDKALKLAIAGDA 146 (332)
T ss_dssp CCEEEEEECSSSCHHHHHTTCCSSHHHHHHHHHHSEE
T ss_pred CCeEEEecCcCHHHHHHhcCCCCCHHHHHHHHHcCCe
Confidence 24543 4355444 321 2224589999999887765
No 67
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=38.66 E-value=49 Score=20.96 Aligned_cols=56 Identities=11% Similarity=0.081 Sum_probs=38.0
Q ss_pred cCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHh
Q 047489 150 AGCTMVVKPAEQTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAA 222 (288)
Q Consensus 150 aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~ 222 (288)
.||-+|+|-.|. .+..++.++.+.++|+ ++-.+.|++ -.++..-+.+.+..+.+..
T Consensus 12 ~~n~vVikT~pG---~A~~va~~iD~~~~~e-I~GTIAGDD-------------TIlvi~r~~~~a~~l~~~i 67 (71)
T 1b4b_A 12 TGNLLVLRTLPG---NAHAIGVLLDNLDWDE-IVGTICGDD-------------TCLIICRTPKDAKKVSNQL 67 (71)
T ss_dssp ETTEEEEEESTT---CHHHHHHHHHHHCCTT-EEEEEECSS-------------EEEEEESSHHHHHHHHHHH
T ss_pred cCCEEEEEeCCC---cHHHHHHHHHhCCCCC-eEEEEeeCC-------------EEEEEECCHHHHHHHHHHH
Confidence 699999986655 4678888888887765 788887732 1344555555566655544
No 68
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=38.04 E-value=35 Score=25.74 Aligned_cols=52 Identities=21% Similarity=0.176 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHh---CCCCCEEEEeCCHHHH
Q 047489 164 LTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIAS---HMDIDKVSFTGSTDVG 215 (288)
Q Consensus 164 ~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~---~~~v~~v~f~Gs~~~~ 215 (288)
..+..+.+.|.+.|+......+++.+...+.+.+.. ..+.|.|+.||+...+
T Consensus 31 sn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 85 (169)
T 1y5e_A 31 KSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT 85 (169)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS
T ss_pred ChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 455667788888888655566666533344444433 1268999999987543
No 69
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=37.74 E-value=36 Score=19.53 Aligned_cols=27 Identities=7% Similarity=0.079 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhcC
Q 047489 50 RRIMLKFADIIEEHLEELAVLEALDAG 76 (288)
Q Consensus 50 ~~~l~~~~~~l~~~~~~l~~~~~~~~g 76 (288)
.++|..+...|.+-+++|++++..+..
T Consensus 14 qEIL~E~RkElqK~K~EIIeAi~~El~ 40 (45)
T 1use_A 14 QELLEEVKKELQKVKEEIIEAFVQELR 40 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467888888888888888888876643
No 70
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=35.60 E-value=59 Score=24.52 Aligned_cols=52 Identities=19% Similarity=0.015 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHH---HhCCCCCEEEEeCCHHHH
Q 047489 164 LTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAI---ASHMDIDKVSFTGSTDVG 215 (288)
Q Consensus 164 ~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l---~~~~~v~~v~f~Gs~~~~ 215 (288)
.....|.+.|.+.|+.--...+++.+.....+++ ....+.|.|+.||+...+
T Consensus 40 ~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~~ 94 (178)
T 3iwt_A 40 ESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred chHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcccC
Confidence 4556788889999987655666665333444444 334678999999987543
No 71
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=35.46 E-value=49 Score=21.68 Aligned_cols=56 Identities=13% Similarity=0.051 Sum_probs=37.5
Q ss_pred cCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHh
Q 047489 150 AGCTMVVKPAEQTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAA 222 (288)
Q Consensus 150 aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~ 222 (288)
.||-+|+|-.|. .+..++.++.+.++|+ ++-.+.|++ -.++..-+...+..+.+.+
T Consensus 24 ~~n~vVikT~PG---~A~~vA~~iD~~~~~e-IlGTIAGDD-------------TIlvi~r~~~~a~~l~~~l 79 (83)
T 2p5m_A 24 ASHMIVLKTMPG---NAQAIGALMDNLDWDE-MMGTICGDD-------------TILIICRTPEDTEGVKNRL 79 (83)
T ss_dssp ETTEEEEEESTT---CHHHHHHHHHTTTCTT-CCEEEECSS-------------EEEEECSSHHHHHHHHHHH
T ss_pred cCCEEEEEeCCC---cHHHHHHHHHhCCCCC-eEEEEecCC-------------EEEEEECCHHHHHHHHHHH
Confidence 799999986655 4678888888887765 788887732 1344445555555555544
No 72
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=35.27 E-value=42 Score=21.74 Aligned_cols=37 Identities=22% Similarity=0.354 Sum_probs=28.7
Q ss_pred cCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCceEEEeCC
Q 047489 150 AGCTMVVKPAEQTPLTALYCAHLAKLAGIPDGVLNVVPGF 189 (288)
Q Consensus 150 aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~v~~i~~~ 189 (288)
.||-+|+|-.|. .+..++.++.+.+.+++++-.+.|+
T Consensus 14 ~~n~vVikT~PG---~A~~va~~iD~~~~~~~I~GTIAGD 50 (78)
T 1xxa_A 14 NDAVVVIHTSPG---AAQLIARLLDSLGKAEGILGTIAGD 50 (78)
T ss_dssp CSSCEEEEESTT---THHHHHHHHTTTTTTTTEEEEEECS
T ss_pred cCCEEEEEeCCC---cHHHHHHHHHhcCCCCCeEEEEecC
Confidence 689999986655 4677888887776778888888874
No 73
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=34.37 E-value=27 Score=25.27 Aligned_cols=44 Identities=16% Similarity=0.095 Sum_probs=29.5
Q ss_pred CceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhhc
Q 047489 181 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAAST 224 (288)
Q Consensus 181 ~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~ 224 (288)
+.+++++|+..+..-..+..+++.++++||+......+.+.+.+
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~ 96 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEE 96 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHH
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHH
Confidence 46887777554443333322578899999998777777766655
No 74
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=30.96 E-value=41 Score=25.94 Aligned_cols=53 Identities=19% Similarity=0.087 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhC--CCCCEEEEeCCHHHHH
Q 047489 164 LTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASH--MDIDKVSFTGSTDVGR 216 (288)
Q Consensus 164 ~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~--~~v~~v~f~Gs~~~~~ 216 (288)
.....+.+.+.+.|.......+++.+...+.+.+... .+.|.|+.||+...+.
T Consensus 49 sn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~ 103 (185)
T 3rfq_A 49 HSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTP 103 (185)
T ss_dssp SHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred cHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 3556777888888876665667766434444554432 5689999999876544
No 75
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=30.11 E-value=51 Score=20.21 Aligned_cols=36 Identities=8% Similarity=0.175 Sum_probs=25.6
Q ss_pred HHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 047489 31 AARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELA 68 (288)
Q Consensus 31 ~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~ 68 (288)
.++.... .|..++..+|..+.......-..+..++.
T Consensus 29 i~k~lg~--~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~ 64 (67)
T 3fgh_A 29 KLKTVKE--NWKNLSDSEKELYIQHAKEDETRYHNEMK 64 (67)
T ss_dssp HHHHHHH--HHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444556 79999999999888877766666655543
No 76
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=28.29 E-value=1.7e+02 Score=24.26 Aligned_cols=60 Identities=10% Similarity=0.096 Sum_probs=38.9
Q ss_pred CCCCEEEEeCCHHHHHHHHHHhhcCCCcc-eEEeCCCCCceeecCCCCHHHHHHHHHHHhhc
Q 047489 201 MDIDKVSFTGSTDVGRLVIQAASTSNLKP-VSLEFGGKSPLLIFDDADVNTTADTALLGNLF 261 (288)
Q Consensus 201 ~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~-~~~e~gg~~~~iv~~~ad~~~a~~~i~~~~~~ 261 (288)
.+.|.|+..|++.+-....+.+.... +| +-+.+|-.+.+-=....|++.+++.++.+.+.
T Consensus 74 ~~~d~vi~~GGDGT~l~a~~~~~~~~-~pvlgi~~G~~gfl~~~~~~~~~~~~~~i~~g~~~ 134 (307)
T 1u0t_A 74 DGCELVLVLGGDGTFLRAAELARNAS-IPVLGVNLGRIGFLAEAEAEAIDAVLEHVVAQDYR 134 (307)
T ss_dssp --CCCEEEEECHHHHHHHHHHHHHHT-CCEEEEECSSCCSSCSEEGGGHHHHHHHHHHTCCE
T ss_pred cCCCEEEEEeCCHHHHHHHHHhccCC-CCEEEEeCCCCccCcccCHHHHHHHHHHHHcCCcE
Confidence 46789999999999888888776523 45 33444433322111246899999999987653
No 77
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=27.12 E-value=2.6e+02 Score=22.91 Aligned_cols=103 Identities=8% Similarity=-0.034 Sum_probs=57.2
Q ss_pred EEEeCCCCCh---HHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHh--CCCCCEEEEeCCHHHHHHHHHHhhcCC-C
Q 047489 154 MVVKPAEQTP---LTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIAS--HMDIDKVSFTGSTDVGRLVIQAASTSN-L 227 (288)
Q Consensus 154 vilkps~~~~---~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~--~~~v~~v~f~Gs~~~~~~i~~~~~~~~-~ 227 (288)
+|+.|..... .....+.+.|.+.|.. +.+........+..+.. ..+.|.|+..|++.+...+...+..+. .
T Consensus 13 vi~Np~sG~~~~~~~~~~i~~~l~~~~~~---~~~~~t~~~~~a~~~~~~~~~~~d~vv~~GGDGTl~~v~~~l~~~~~~ 89 (304)
T 3s40_A 13 LIVNPKAGQGDLHTNLTKIVPPLAAAFPD---LHILHTKEQGDATKYCQEFASKVDLIIVFGGDGTVFECTNGLAPLEIR 89 (304)
T ss_dssp EEECTTCSSSCHHHHHHHHHHHHHHHCSE---EEEEECCSTTHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHTTCSSC
T ss_pred EEECcccCCCchHHHHHHHHHHHHHcCCe---EEEEEccCcchHHHHHHHhhcCCCEEEEEccchHHHHHHHHHhhCCCC
Confidence 4566664432 2334566677887764 44443322222222211 247899999999999988887776521 1
Q ss_pred cce-EEeCC-CCCcee-ecCCCCHHHHHHHHHHHh
Q 047489 228 KPV-SLEFG-GKSPLL-IFDDADVNTTADTALLGN 259 (288)
Q Consensus 228 ~~~-~~e~g-g~~~~i-v~~~ad~~~a~~~i~~~~ 259 (288)
.|+ ++-+| ||+..- +.-..|++.+++.++.+.
T Consensus 90 ~~l~iiP~Gt~N~~ar~lg~~~~~~~a~~~i~~g~ 124 (304)
T 3s40_A 90 PTLAIIPGGTCNDFSRTLGVPQNIAEAAKLITKEH 124 (304)
T ss_dssp CEEEEEECSSCCHHHHHTTCCSSHHHHHHHHTTCC
T ss_pred CcEEEecCCcHHHHHHHcCCCccHHHHHHHHHhCC
Confidence 233 33334 333321 222458899988887543
No 78
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=27.03 E-value=2e+02 Score=21.65 Aligned_cols=39 Identities=26% Similarity=0.328 Sum_probs=29.1
Q ss_pred HHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCceEEEeCC
Q 047489 147 TLAAGCTMVVKPAEQTPLTALYCAHLAKLAGIPDGVLNVVPGF 189 (288)
Q Consensus 147 AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~v~~i~~~ 189 (288)
.=..||-+|+|-.|.. +..++.++...++| +++-.+.|+
T Consensus 108 v~~~~nlvVikT~PG~---A~~vA~~iD~~~~~-eIlGTIAGD 146 (170)
T 3lap_A 108 TDDSGNLAVLRTPPGA---AHYLASAIDRAALP-QVVGTIAGD 146 (170)
T ss_dssp EEEETTEEEEECSTTC---HHHHHHHHHHHTCT-TEEEEEECS
T ss_pred EeecCCEEEEEeCCCc---HHHHHHHHHhCCCC-CeEEEEecC
Confidence 3457999999966554 67888888888776 577777773
No 79
>1wu2_A MOEA protein, molybdopterin biosynthesis MOEA protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.30A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 1xi8_A
Probab=25.74 E-value=15 Score=32.11 Aligned_cols=53 Identities=15% Similarity=0.113 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHh-CCCCCEEEEeCCHHHHHH
Q 047489 165 TALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIAS-HMDIDKVSFTGSTDVGRL 217 (288)
Q Consensus 165 ~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~-~~~v~~v~f~Gs~~~~~~ 217 (288)
....+...+.+.|.......+++.+.....+.+.. ....|.|+.+|+..++..
T Consensus 212 n~~~L~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~DlvittGG~s~g~~ 265 (396)
T 1wu2_A 212 NSIMLQGLVEKFFGEPILYGVLPDDESIIKETLEKAKNECDIVLITGGSAFGDK 265 (396)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSCHHHHTTHHHHHHHCSEEEECC--------
T ss_pred hHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHhhCCCEEEEeCCCCCChh
Confidence 44567888888888655566666532233333322 124799999999987653
No 80
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.60 E-value=71 Score=20.75 Aligned_cols=36 Identities=11% Similarity=0.146 Sum_probs=25.3
Q ss_pred HHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 047489 31 AARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELA 68 (288)
Q Consensus 31 ~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~ 68 (288)
.++...+ .|..++.+++..+.......-..+..++.
T Consensus 48 isk~lg~--~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~ 83 (86)
T 2eqz_A 48 FSKKCSE--RWKTMSGKEKSKFDEMAKADKVRYDREMK 83 (86)
T ss_dssp HHHHHHH--HHHSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455 79999999998888777776666665543
No 81
>1v63_A Nucleolar transcription factor 1; DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: a.21.1.1
Probab=23.11 E-value=99 Score=20.94 Aligned_cols=39 Identities=13% Similarity=0.076 Sum_probs=29.2
Q ss_pred HHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 047489 31 AARHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLE 71 (288)
Q Consensus 31 ~a~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~ 71 (288)
.++...+ .|..++..++..+.......-..+..++..-.
T Consensus 37 isK~lge--~Wk~ls~~eK~~Y~~~A~~~k~~Y~~e~~~Y~ 75 (101)
T 1v63_A 37 RMVEIGS--RWQRISQSQKEHYKKLAEEQQRQYKVHLDLWV 75 (101)
T ss_dssp HHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555566 89999999999988888776667777665533
No 82
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=22.57 E-value=3.4e+02 Score=22.74 Aligned_cols=41 Identities=12% Similarity=0.010 Sum_probs=31.7
Q ss_pred HHHHHhCCCCCEEEEeCCHHHHHHHHHHhhcCCCcceEEeCC
Q 047489 194 GAAIASHMDIDKVSFTGSTDVGRLVIQAASTSNLKPVSLEFG 235 (288)
Q Consensus 194 ~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~g 235 (288)
.+.|+.++++|.|+....+..-..+...+.+ .+|.+++|-+
T Consensus 80 ~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~-aGkhVl~EKP 120 (361)
T 3u3x_A 80 AEEILEDENIGLIVSAAVSSERAELAIRAMQ-HGKDVLVDKP 120 (361)
T ss_dssp HHHHHTCTTCCEEEECCCHHHHHHHHHHHHH-TTCEEEEESC
T ss_pred HHHHhcCCCCCEEEEeCChHHHHHHHHHHHH-CCCeEEEeCC
Confidence 5677788899999988888777777777776 5578888754
No 83
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=22.16 E-value=1.1e+02 Score=22.60 Aligned_cols=56 Identities=11% Similarity=0.081 Sum_probs=38.2
Q ss_pred cCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCEEEEeCCHHHHHHHHHHh
Q 047489 150 AGCTMVVKPAEQTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRLVIQAA 222 (288)
Q Consensus 150 aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~v~f~Gs~~~~~~i~~~~ 222 (288)
.||-+|+|-.|.. +..++.++...++|+ ++-.+.|++ -.++..-+...+..+.+.+
T Consensus 90 ~~n~vVikT~PG~---A~~va~~iD~~~~~e-IlGTIAGDD-------------TIlvi~r~~~~a~~l~~~l 145 (149)
T 1b4a_A 90 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGDD-------------TCLIICRTPKDAKKVSNQL 145 (149)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHTCTT-EEEEEECSS-------------EEEEEESSHHHHHHHHHHH
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecCC-------------EEEEEeCCHHHHHHHHHHH
Confidence 7999999966554 678888888887865 788887742 1344455555555555544
No 84
>2co9_A Thymus high mobility group box protein TOX; TOX protein, HMG box domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=21.85 E-value=1.4e+02 Score=20.14 Aligned_cols=37 Identities=19% Similarity=0.231 Sum_probs=26.4
Q ss_pred HhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 047489 33 RHAFDHGPWPRFSGAQRRRIMLKFADIIEEHLEELAVLE 71 (288)
Q Consensus 33 ~~a~~~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~ 71 (288)
+.... .|..++.++|..+.......-..+..++..--
T Consensus 50 k~lg~--~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Y~ 86 (102)
T 2co9_A 50 KIVAS--MWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYR 86 (102)
T ss_dssp HHHHH--HHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH--HHccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445 79999999999888877776666666655433
No 85
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=21.84 E-value=3.9e+02 Score=23.15 Aligned_cols=99 Identities=17% Similarity=0.057 Sum_probs=56.0
Q ss_pred EEEEcCCCcchHhhHHHHHHHHhc-CCeEEEeCCCCChHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHhCCCCCE
Q 047489 127 VGHIVPWNFPTFIFFMKVSPTLAA-GCTMVVKPAEQTPLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIASHMDIDK 205 (288)
Q Consensus 127 v~~i~p~n~P~~~~~~~~~~AL~a-GN~vilkps~~~~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~~~~v~~ 205 (288)
+++|+..+.-. ..+++|.. .+.-|.-.....+..+..+.+.+.+.|+|. ..+..+ +.+..+.|+.++++|.
T Consensus 23 vgiIG~G~~g~-----~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~--~~~~~~-~~~~~~~ll~~~~vD~ 94 (444)
T 2ixa_A 23 IAFIAVGLRGQ-----THVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKP--AKVFGN-GNDDYKNMLKDKNIDA 94 (444)
T ss_dssp EEEECCSHHHH-----HHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCC--CEEECS-STTTHHHHTTCTTCCE
T ss_pred EEEEecCHHHH-----HHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCC--Cceecc-CCCCHHHHhcCCCCCE
Confidence 45666554322 12344433 343343334455666666666665667753 233332 2234677888889998
Q ss_pred EEEeCCHHHHHHHHHHhhcCCCcceEEeC
Q 047489 206 VSFTGSTDVGRLVIQAASTSNLKPVSLEF 234 (288)
Q Consensus 206 v~f~Gs~~~~~~i~~~~~~~~~~~~~~e~ 234 (288)
|+..-....-..+...+.+ ..|.+++|-
T Consensus 95 V~i~tp~~~h~~~~~~al~-aGkhV~~EK 122 (444)
T 2ixa_A 95 VFVSSPWEWHHEHGVAAMK-AGKIVGMEV 122 (444)
T ss_dssp EEECCCGGGHHHHHHHHHH-TTCEEEECC
T ss_pred EEEcCCcHHHHHHHHHHHH-CCCeEEEeC
Confidence 8887766665555555555 457777774
No 86
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=21.83 E-value=3.9e+02 Score=23.07 Aligned_cols=94 Identities=20% Similarity=0.244 Sum_probs=52.9
Q ss_pred HHHHHHHHHHcCCC-CCceEEEeCCChh----HHHHHHhCCCCCEEEE------eCCHHHHHHHHHHhhcC-CCcceEEe
Q 047489 166 ALYCAHLAKLAGIP-DGVLNVVPGFGPT----AGAAIASHMDIDKVSF------TGSTDVGRLVIQAASTS-NLKPVSLE 233 (288)
Q Consensus 166 ~~~l~~~l~~ag~p-~~~v~~i~~~~~~----~~~~l~~~~~v~~v~f------~Gs~~~~~~i~~~~~~~-~~~~~~~e 233 (288)
+.....++...|+. .+.+.+.-+.+.+ ..+.++.++++|.|+. +-...+++.|.+.+... ..+|++.-
T Consensus 260 ~~~t~D~i~~~G~~~aN~lD~gG~a~~e~~~~al~~~l~d~~v~~ilv~i~ggi~~~~~vA~~i~~a~~~~~~~kPvvv~ 339 (397)
T 3ufx_B 260 VMYTLDLVNRVGGKPANFLDIGGGAKADVVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVIRALEEGLLTKPVVMR 339 (397)
T ss_dssp HHHHHHHHHHTTCCBSEEEECCSCCCHHHHHHHHHHHHTCTTCCEEEEEEEEEEEESHHHHHHHHHHHTTTCCCSCEEEE
T ss_pred HHHHHHHHHHcCCCcCCcEecCCCCCHHHHHHHHHHHHcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHhhCCCCcEEEE
Confidence 33445566666653 3333322222221 2355777888887653 23467778887766542 14787777
Q ss_pred CCCCCce----e-----ecCCCCHHHHHHHHHHHh
Q 047489 234 FGGKSPL----L-----IFDDADVNTTADTALLGN 259 (288)
Q Consensus 234 ~gg~~~~----i-----v~~~ad~~~a~~~i~~~~ 259 (288)
+.|.+.- + |....+++.|++.++...
T Consensus 340 ~~G~~~~~~~~~l~~~gip~~~~~e~Aa~~~~~l~ 374 (397)
T 3ufx_B 340 VAGTAEEEAKKLLEGKPVYMYPTSIEAAKVTVAMK 374 (397)
T ss_dssp EEEECHHHHHHHTTTSSEEECSSHHHHHHHHHHSC
T ss_pred ccCCCHHHHHHHHHhCCCcccCCHHHHHHHHHHHH
Confidence 7664431 1 233458899999987654
No 87
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=21.36 E-value=72 Score=24.25 Aligned_cols=54 Identities=17% Similarity=0.006 Sum_probs=34.2
Q ss_pred hHHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHh---CCCCCEEEEeCCHHHHH
Q 047489 163 PLTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIAS---HMDIDKVSFTGSTDVGR 216 (288)
Q Consensus 163 ~~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~---~~~v~~v~f~Gs~~~~~ 216 (288)
-.....+.+.+.+.|.......+++.+-..+.+.+.. ..+.|.|+.||+...+.
T Consensus 39 Dsn~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g~ 95 (178)
T 2pjk_A 39 DESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYSP 95 (178)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSST
T ss_pred ehHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 3455677888888888655566676643444444433 22489999999865443
No 88
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=20.52 E-value=66 Score=24.42 Aligned_cols=53 Identities=17% Similarity=-0.047 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHh-CCCCCEEEEeCCHHHHH
Q 047489 164 LTALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIAS-HMDIDKVSFTGSTDVGR 216 (288)
Q Consensus 164 ~~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~-~~~v~~v~f~Gs~~~~~ 216 (288)
.-+..+.+.|.+.|+......+++.+...+.+.+.. ..+.|.|+.||+...+.
T Consensus 23 tN~~~l~~~L~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~~~DlVittGG~g~~~ 76 (172)
T 3kbq_A 23 TNAAFIGNFLTYHGYQVRRGFVVMDDLDEIGWAFRVALEVSDLVVSSGGLGPTF 76 (172)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHHCSEEEEESCCSSST
T ss_pred HHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCEEEEcCCCcCCc
Confidence 455677888888888766666776643444444432 12478899999776543
No 89
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=20.47 E-value=65 Score=24.30 Aligned_cols=49 Identities=22% Similarity=0.150 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHcCCCCCceEEEeCCChhHHHHHHh---CCCCCEEEEeCCHH
Q 047489 165 TALYCAHLAKLAGIPDGVLNVVPGFGPTAGAAIAS---HMDIDKVSFTGSTD 213 (288)
Q Consensus 165 ~~~~l~~~l~~ag~p~~~v~~i~~~~~~~~~~l~~---~~~v~~v~f~Gs~~ 213 (288)
.+..+.+.|.+.|+......+++.+...+.+.+.. ..+.|.|+.||+..
T Consensus 29 n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g 80 (172)
T 1mkz_A 29 SGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTG 80 (172)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCS
T ss_pred cHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCC
Confidence 44566777777777554455665533334444332 22478888888763
Done!