BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047490
(323 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5VRY0|RH39_ORYSJ DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp.
japonica GN=Os01g0184500 PE=2 SV=1
Length = 625
Score = 610 bits (1574), Expect = e-174, Method: Compositional matrix adjust.
Identities = 287/323 (88%), Positives = 307/323 (95%)
Query: 1 LLRHDEAMLGVLMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQ 60
LLR DEAMLG+ MKPRRPRAVVLCPTREL+EQVFRVAKSISHHARFRSTMVSGG R+RPQ
Sbjct: 171 LLRRDEAMLGMSMKPRRPRAVVLCPTRELTEQVFRVAKSISHHARFRSTMVSGGSRIRPQ 230
Query: 61 EDSLNNPIDMVVGTPGRILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLK 120
EDSLN P+DMVVGTPGRIL HI+DGNMVYGDIKYLVLDEADTMFD+GFGPDIRKFL PLK
Sbjct: 231 EDSLNMPVDMVVGTPGRILDHIKDGNMVYGDIKYLVLDEADTMFDQGFGPDIRKFLAPLK 290
Query: 121 NRASKPNGQGFQTVLVSATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKLSGS 180
NRA+KP QGFQTVLV+ATMTKAVQKL+DEE +GI HLRT+T K++A+ARHDFIKLSGS
Sbjct: 291 NRAAKPGDQGFQTVLVTATMTKAVQKLIDEEFEGIVHLRTTTFQKRVATARHDFIKLSGS 350
Query: 181 ENKLEALLQVLEPSLSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVEN 240
ENKLEALLQVLEPSL+KGNKVMVFCNTLNSSRAVDHFL ENQISTVNYHGEVPA+ERVEN
Sbjct: 351 ENKLEALLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLTENQISTVNYHGEVPAEERVEN 410
Query: 241 LNKFKNEDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVT 300
LNKF+NE+GDCPTLVCTDLAARGLDLDVDHVIMFDFP NSIDYLHRTGRTARMGAKGKVT
Sbjct: 411 LNKFRNEEGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 470
Query: 301 SLVAKKDVLLADRIEEAIRKNES 323
SLVAKKDV LA RIEEA++KNES
Sbjct: 471 SLVAKKDVTLATRIEEAMKKNES 493
>sp|Q56X76|RH39_ARATH DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana
GN=RH39 PE=2 SV=2
Length = 621
Score = 582 bits (1499), Expect = e-165, Method: Compositional matrix adjust.
Identities = 276/323 (85%), Positives = 298/323 (92%)
Query: 1 LLRHDEAMLGVLMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQ 60
L+R DEA LG KPRRPR VVLCPTRELSEQV+RVAKSISHHARFRS +VSGG R+RPQ
Sbjct: 173 LMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSILVSGGSRIRPQ 232
Query: 61 EDSLNNPIDMVVGTPGRILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLK 120
EDSLNN IDMVVGTPGRILQHIE+GNMVYGDI YLVLDEADTMFDRGFGP+IRKFL PL
Sbjct: 233 EDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFLAPLN 292
Query: 121 NRASKPNGQGFQTVLVSATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKLSGS 180
RA K N QGFQTVLV+ATMT AVQKLVDEE QGI HLRTSTLHKKIA+ARHDFIKLSG
Sbjct: 293 QRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKKIANARHDFIKLSGG 352
Query: 181 ENKLEALLQVLEPSLSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVEN 240
E+KLEALLQVLEPSL+KG+KVMVFCNTLNSSRAVDH+L+ENQISTVNYHGEVPA++RVEN
Sbjct: 353 EDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQRVEN 412
Query: 241 LNKFKNEDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVT 300
L KFK+E+GDCPTLVCTDLAARGLDLDVDHV+MFDFP NSIDYLHRTGRTARMGAKGKVT
Sbjct: 413 LKKFKDEEGDCPTLVCTDLAARGLDLDVDHVVMFDFPKNSIDYLHRTGRTARMGAKGKVT 472
Query: 301 SLVAKKDVLLADRIEEAIRKNES 323
SLV++KD +LA RIEEA+R NES
Sbjct: 473 SLVSRKDQMLAARIEEAMRNNES 495
>sp|Q9VHP0|DDX3_DROME ATP-dependent RNA helicase bel OS=Drosophila melanogaster GN=bel
PE=1 SV=1
Length = 798
Score = 162 bits (409), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 154/299 (51%), Gaps = 19/299 (6%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P +VL PTREL+ Q+F AK ++ +R R ++ GG Q L+ ++V TPGR
Sbjct: 379 PLGLVLAPTRELATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGR 438
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
+ I G + +I++LVLDEAD M D GF P IR+ + L P GQ QT++ S
Sbjct: 439 LEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLN---MPPTGQ-RQTLMFS 494
Query: 138 ATMTKAVQKLVDEECQGIAHL---RTSTLHKKIASARHDFIKLSGSENKLEALLQVLE-- 192
AT K +Q+L + L R + + I I +K LL +L
Sbjct: 495 ATFPKQIQELASDFLSNYIFLAVGRVGSTSENITQT----ILWVYEPDKRSYLLDLLSSI 550
Query: 193 ---PSLSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDG 249
P +K + ++F T + +++ FL + + HG+ +ER E L F++ G
Sbjct: 551 RDGPEYTKDSLTLIFVETKKGADSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRS--G 608
Query: 250 DCPTLVCTDLAARGLDLD-VDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKD 307
DCP LV T +AARGLD+ V HVI FD P + +Y+HR GRT RMG G TS +K+
Sbjct: 609 DCPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNEKN 667
>sp|Q5B0J9|DBP2_EMENI ATP-dependent RNA helicase dbp2 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=dbp2
PE=3 SV=1
Length = 563
Score = 162 bits (409), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 155/290 (53%), Gaps = 18/290 (6%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P ++L PTREL+ Q+ +R R+T V GG PQ L+ +++ + TPGR
Sbjct: 214 PIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGR 273
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
++ +E G + YLVLDEAD M D GF P IRK + + +P+ QT + S
Sbjct: 274 LIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQI-----RPD---RQTCMWS 325
Query: 138 ATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARH---DFIKLSGSENKLEALLQVLEPS 194
AT K V++L + + ++ SA H +++ K + +++ LE
Sbjct: 326 ATWPKEVRQLASDFLNNYIQVNIGSMD---LSANHRITQIVEVISEFEKRDRMIKHLEKI 382
Query: 195 L-SKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPT 253
+ ++GNK +VF T + + FL ++ ++ HG+ QER LN+FK G P
Sbjct: 383 MENRGNKCLVFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKT--GKSPI 440
Query: 254 LVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSL 302
+V TD+A+RG+D+ D+ HVI +D+P NS DY+HR GRT R GAKG +
Sbjct: 441 MVATDVASRGIDVRDITHVINYDYPNNSEDYVHRIGRTGRAGAKGTAITF 490
>sp|Q2U070|DBP2_ASPOR ATP-dependent RNA helicase dbp2 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=dbp2 PE=3 SV=1
Length = 554
Score = 161 bits (407), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 153/293 (52%), Gaps = 24/293 (8%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P +VL PTREL+ Q+ +R R+T V GG PQ L+ +++ + TPGR
Sbjct: 204 PIVLVLAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGR 263
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
++ +E G + YLVLDEAD M D GF P IRK + + +P+ QT + S
Sbjct: 264 LIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQI-----RPDR---QTCMWS 315
Query: 138 ATMTKAVQKLVDEECQ-----GIAHLRTSTLHK--KIASARHDFIKLSGSENKLEALLQV 190
AT K V++L + I + S H+ +I DF K LE +++
Sbjct: 316 ATWPKEVRQLASDFLNDYIQVNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIME- 374
Query: 191 LEPSLSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGD 250
++GNK ++F T + + FL ++ ++ HG+ QER LN+FK G
Sbjct: 375 -----NRGNKCLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKT--GK 427
Query: 251 CPTLVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSL 302
P +V TD+A+RG+D+ D+ HV+ +D+P NS DY+HR GRT R GAKG +
Sbjct: 428 SPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITF 480
>sp|A1DGZ7|DBP2_NEOFI ATP-dependent RNA helicase dbp2 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp2
PE=3 SV=1
Length = 545
Score = 161 bits (407), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 155/298 (52%), Gaps = 24/298 (8%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P ++L PTREL+ Q+ +R R+T V GG PQ L+ +++ + TPGR
Sbjct: 193 PIVLILAPTRELAVQIQTEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGR 252
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
++ +E G + YLVLDEAD M D GF P IRK + + +P+ QT + S
Sbjct: 253 LIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQI-----RPD---RQTCMWS 304
Query: 138 ATMTKAVQKLV-----DEECQGIAHLRTSTLHK--KIASARHDFIKLSGSENKLEALLQV 190
AT K V++L D I + S H+ +I DF K LE +++
Sbjct: 305 ATWPKEVRQLATDFLNDYIQVNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIME- 363
Query: 191 LEPSLSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGD 250
++GNK ++F T + + FL ++ ++ HG+ QER LN+FK G
Sbjct: 364 -----NRGNKCLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKT--GK 416
Query: 251 CPTLVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKD 307
P +V TD+A+RG+D+ D+ HV+ +D+P NS DY+HR GRT R GAKG + ++
Sbjct: 417 SPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTEN 474
>sp|A4RHF1|DED1_MAGO7 ATP-dependent RNA helicase DED1 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=DED1 PE=3 SV=2
Length = 671
Score = 160 bits (406), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 150/291 (51%), Gaps = 9/291 (3%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P +++L PTREL Q++ ++ ++ + R +V GG + Q + D++V TPGR
Sbjct: 275 PTSLILAPTRELVSQIYDESRKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGR 334
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
++ IE G + +IKYLVLDEAD M D GF P IR+ + PN Q QT++ S
Sbjct: 335 LVDLIERGRISLCNIKYLVLDEADRMLDMGFEPQIRRIV----EGEDMPNVQDRQTLMFS 390
Query: 138 ATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLSK 197
AT +Q+L + + L + + +++ ++K+ LL +L S
Sbjct: 391 ATFPGYIQQLARDFLKDYIFLSVGRVGSTSENITQRVMEVKHRDDKISHLLDLL--STHG 448
Query: 198 GNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPTLVCT 257
G ++F T ++ + FL + + HG+ +ER L F+ G CP LV T
Sbjct: 449 GGLTLIFVETKRNADELSDFLQNQNLPATSIHGDRTQRERERALEMFRT--GRCPILVAT 506
Query: 258 DLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKD 307
+AARGLD+ +V HVI +D P + DY+HR GRT R G G T+ KD
Sbjct: 507 AVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFDMKD 557
>sp|A1C6C4|DBP2_ASPCL ATP-dependent RNA helicase dbp2 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=dbp2 PE=3 SV=1
Length = 549
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 152/293 (51%), Gaps = 24/293 (8%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P +VL PTREL+ Q+ +R R+T V GG PQ L+ +++ + TPGR
Sbjct: 199 PIVLVLAPTRELAVQIQTEITKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGR 258
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
++ +E G + YLVLDEAD M D GF P IRK + + +P+ QT + S
Sbjct: 259 LIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQI-----RPD---RQTCMWS 310
Query: 138 ATMTKAVQKLVDEECQ-----GIAHLRTSTLHK--KIASARHDFIKLSGSENKLEALLQV 190
AT K V++L + I + S H+ +I DF K LE +++
Sbjct: 311 ATWPKEVRQLASDFLNDYIQVNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIME- 369
Query: 191 LEPSLSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGD 250
+ NK+++F T + + FL ++ ++ HG+ QER LN+FK G
Sbjct: 370 -----DRSNKILIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKA--GK 422
Query: 251 CPTLVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSL 302
P +V TD+A+RG+D+ D+ HV+ +D+P NS DY+HR GRT R GAKG +
Sbjct: 423 SPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITF 475
>sp|Q2R1M8|RH52C_ORYSJ DEAD-box ATP-dependent RNA helicase 52C OS=Oryza sativa subsp.
japonica GN=Os11g0599500 PE=3 SV=1
Length = 623
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 156/309 (50%), Gaps = 11/309 (3%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P A++L PTRELS Q+ A+ S+ R + GG + Q L +D++V TPGR
Sbjct: 236 PLALILSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATPGR 295
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
++ +E + I+YL LDEAD M D GF P +R+ + + P QT+L S
Sbjct: 296 LVDLLERARVSLQSIRYLALDEADRMLDMGFEPQVRRIV----EQMDMPPPGARQTMLFS 351
Query: 138 ATMTKAVQKLVDEECQGIAHLRTSTLHKK--IASARHDFIKLSGSENKLEALLQVLEPSL 195
AT K +Q++ + + L + + R +F++ + + L LL S
Sbjct: 352 ATFPKEIQRMASDFLENYIFLAVGRVGSSTDLIVQRVEFVQEADKRSHLMDLLHAQRDSA 411
Query: 196 SKGNK--VMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPT 253
+ G +VF T + +++H+L N + HG+ QER L FK+ G P
Sbjct: 412 TPGKPTLTLVFVETKRGADSLEHWLCMNGFPATSIHGDRNQQEREYALRSFKS--GHTPI 469
Query: 254 LVCTDLAARGLDLD-VDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDVLLAD 312
LV TD+AARGLD+ V HV+ FD P + DY+HR GRT R G G T+ + + +A
Sbjct: 470 LVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSSMAR 529
Query: 313 RIEEAIRKN 321
+ E ++++
Sbjct: 530 SLAELMQES 538
>sp|A2QC74|DBP2_ASPNC ATP-dependent RNA helicase dbp2 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=dbp2 PE=3 SV=1
Length = 565
Score = 159 bits (402), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 152/293 (51%), Gaps = 24/293 (8%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P ++L PTREL+ Q+ +R R+T V GG PQ L+ +++ + TPGR
Sbjct: 211 PIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGR 270
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
++ +E G + YLVLDEAD M D GF P IRK + + +P+ QT + S
Sbjct: 271 LIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQI-----RPDR---QTCMWS 322
Query: 138 ATMTKAVQKLVDEECQ-----GIAHLRTSTLHK--KIASARHDFIKLSGSENKLEALLQV 190
AT K V++L + I + S H+ +I DF K LE +++
Sbjct: 323 ATWPKEVRQLASDFLNDYIQVNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIME- 381
Query: 191 LEPSLSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGD 250
++ NK ++F T + + FL ++ ++ HG+ QER LN+FK G
Sbjct: 382 -----NRANKCLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKT--GK 434
Query: 251 CPTLVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSL 302
P +V TD+A+RG+D+ D+ HV+ +D+P NS DY+HR GRT R GAKG +
Sbjct: 435 SPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITF 487
>sp|Q4R6M5|DDX5_MACFA Probable ATP-dependent RNA helicase DDX5 OS=Macaca fascicularis
GN=DDX5 PE=2 SV=1
Length = 614
Score = 158 bits (400), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 156/296 (52%), Gaps = 18/296 (6%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P +VL PTREL++QV +VA R +ST + GG PQ L +++ + TPGR
Sbjct: 168 PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 227
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
++ +E G YLVLDEAD M D GF P IRK + + +P+ QT++ S
Sbjct: 228 LIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI-----RPD---RQTLMWS 279
Query: 138 ATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKL---SGSENKLEALLQVLEPS 194
AT K V++L ++ + H+ L SA H+ +++ K E L++++E
Sbjct: 280 ATWPKEVRQLAEDFLKDYIHINIGALE---LSANHNILQIVDVCHDVEKDEKLIRLMEEI 336
Query: 195 LS-KGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPT 253
+S K NK +VF T + + + + HG+ QER LN+FK+ G P
Sbjct: 337 MSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERGWVLNEFKH--GKAPI 394
Query: 254 LVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDV 308
L+ TD+A+RGLD+ DV VI +D+P +S DY+HR GRTAR G + ++
Sbjct: 395 LIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNI 450
>sp|Q5R4I9|DDX5_PONAB Probable ATP-dependent RNA helicase DDX5 OS=Pongo abelii GN=DDX5
PE=2 SV=1
Length = 614
Score = 158 bits (400), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 156/296 (52%), Gaps = 18/296 (6%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P +VL PTREL++QV +VA R +ST + GG PQ L +++ + TPGR
Sbjct: 168 PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 227
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
++ +E G YLVLDEAD M D GF P IRK + + +P+ QT++ S
Sbjct: 228 LIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI-----RPDR---QTLMWS 279
Query: 138 ATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKL---SGSENKLEALLQVLEPS 194
AT K V++L ++ + H+ L SA H+ +++ K E L++++E
Sbjct: 280 ATWPKEVRQLAEDFLKDYIHINIGALE---LSANHNILQIVDVCHDVEKDEKLIRLMEEI 336
Query: 195 LS-KGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPT 253
+S K NK +VF T + + + + HG+ QER LN+FK+ G P
Sbjct: 337 MSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKH--GKAPI 394
Query: 254 LVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDV 308
L+ TD+A+RGLD+ DV VI +D+P +S DY+HR GRTAR G + ++
Sbjct: 395 LIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNI 450
>sp|P17844|DDX5_HUMAN Probable ATP-dependent RNA helicase DDX5 OS=Homo sapiens GN=DDX5
PE=1 SV=1
Length = 614
Score = 158 bits (400), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 156/296 (52%), Gaps = 18/296 (6%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P +VL PTREL++QV +VA R +ST + GG PQ L +++ + TPGR
Sbjct: 168 PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 227
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
++ +E G YLVLDEAD M D GF P IRK + + +P+ QT++ S
Sbjct: 228 LIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI-----RPDR---QTLMWS 279
Query: 138 ATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKL---SGSENKLEALLQVLEPS 194
AT K V++L ++ + H+ L SA H+ +++ K E L++++E
Sbjct: 280 ATWPKEVRQLAEDFLKDYIHINIGALE---LSANHNILQIVDVCHDVEKDEKLIRLMEEI 336
Query: 195 LS-KGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPT 253
+S K NK +VF T + + + + HG+ QER LN+FK+ G P
Sbjct: 337 MSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKH--GKAPI 394
Query: 254 LVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDV 308
L+ TD+A+RGLD+ DV VI +D+P +S DY+HR GRTAR G + ++
Sbjct: 395 LIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNI 450
>sp|Q4X195|DBP2_ASPFU ATP-dependent RNA helicase dbp2 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=dbp2
PE=3 SV=2
Length = 547
Score = 158 bits (400), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 154/298 (51%), Gaps = 24/298 (8%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P ++L PTREL+ Q+ +R R+T V GG PQ L+ +++ + TPGR
Sbjct: 195 PIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGR 254
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
++ +E G + YLVLDEAD M D GF P IRK + + +P+ QT + S
Sbjct: 255 LIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQI-----RPD---RQTCMWS 306
Query: 138 ATMTKAVQKLV-----DEECQGIAHLRTSTLHK--KIASARHDFIKLSGSENKLEALLQV 190
AT K V++L D I + S H+ +I DF K LE +++
Sbjct: 307 ATWPKEVRQLATDFLNDYIQVNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIME- 365
Query: 191 LEPSLSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGD 250
++ NK ++F T + + FL ++ ++ HG+ QER LN+FK G
Sbjct: 366 -----NRSNKCLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKT--GK 418
Query: 251 CPTLVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKD 307
P +V TD+A+RG+D+ D+ HV+ +D+P NS DY+HR GRT R GAKG + ++
Sbjct: 419 SPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTEN 476
>sp|Q61656|DDX5_MOUSE Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus GN=Ddx5
PE=1 SV=2
Length = 614
Score = 158 bits (399), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 156/296 (52%), Gaps = 18/296 (6%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P +VL PTREL++QV +VA R +ST + GG PQ L +++ + TPGR
Sbjct: 168 PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 227
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
++ +E G YLVLDEAD M D GF P IRK + + +P+ QT++ S
Sbjct: 228 LIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI-----RPDR---QTLMWS 279
Query: 138 ATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKL---SGSENKLEALLQVLEPS 194
AT K V++L ++ + H+ L SA H+ +++ K E L++++E
Sbjct: 280 ATWPKEVRQLAEDFLKDYIHINIGALE---LSANHNILQIVDVCHDVEKDEKLIRLMEEI 336
Query: 195 LS-KGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPT 253
+S K NK +VF T + + + + HG+ QER LN+FK+ G P
Sbjct: 337 MSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKH--GKAPI 394
Query: 254 LVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDV 308
L+ TD+A+RGLD+ DV VI +D+P +S DY+HR GRTAR G + ++
Sbjct: 395 LIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNI 450
>sp|Q4IF76|DBP2_GIBZE ATP-dependent RNA helicase DBP2 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DBP2 PE=3
SV=1
Length = 555
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 153/287 (53%), Gaps = 12/287 (4%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P +VL PTREL+ Q+ K +R R+T V GG PQ L+ +++ + TPGR
Sbjct: 208 PIVLVLAPTRELAVQIQEEMKKFGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGR 267
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
++ +E G + YLVLDEAD M D GF P IRK + + +P+ QT++ S
Sbjct: 268 LIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQI-----RPDR---QTLMWS 319
Query: 138 ATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSL-S 196
AT K V+ L + Q + ++ +++ K + +++ +E + +
Sbjct: 320 ATWPKEVRALASDFLQDFIQVNIGSMELAANHRITQIVEVVTEMEKRDRMIKHMEKVMEN 379
Query: 197 KGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPTLVC 256
K NK+++F T + + FL ++ ++ HG+ ER L++FK G P +V
Sbjct: 380 KENKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKT--GKSPIMVA 437
Query: 257 TDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSL 302
TD+A+RG+D+ ++ HV+ +D+P NS DY+HR GRT R GA G +L
Sbjct: 438 TDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAMGTAITL 484
>sp|A5A6J2|DDX5_PANTR Probable ATP-dependent RNA helicase DDX5 OS=Pan troglodytes GN=DDX5
PE=2 SV=1
Length = 614
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 155/296 (52%), Gaps = 18/296 (6%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P +VL PTREL++QV +VA R +ST + GG PQ L ++ + TPGR
Sbjct: 168 PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVENCIATPGR 227
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
++ +E G YLVLDEAD M D GF P IRK + + +P+ QT++ S
Sbjct: 228 LIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI-----RPDR---QTLMWS 279
Query: 138 ATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKL---SGSENKLEALLQVLEPS 194
AT K V++L ++ + H+ L SA H+ +++ K E L++++E
Sbjct: 280 ATWPKEVRQLAEDFLKDYIHINIGALE---LSANHNILQIVDVCHDVEKDEKLIRLMEEI 336
Query: 195 LS-KGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPT 253
+S K NK +VF T + + + + HG+ QER LN+FK+ G P
Sbjct: 337 MSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKH--GKAPI 394
Query: 254 LVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDV 308
L+ TD+A+RGLD+ DV VI +D+P +S DY+HR GRTAR G + ++
Sbjct: 395 LIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNI 450
>sp|Q9P6N8|RRP3_SCHPO ATP-dependent rRNA helicase rrp3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rrp3 PE=3 SV=1
Length = 465
Score = 155 bits (393), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 160/307 (52%), Gaps = 23/307 (7%)
Query: 20 AVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGRIL 79
AVVL PTREL+ Q+ ++I RS ++ GG + Q +L+ ++V TPGR++
Sbjct: 117 AVVLAPTRELAYQISEQFEAIGGSIGVRSVVIVGGMDMVTQAVALSKKPHVLVCTPGRLM 176
Query: 80 QHIEDGN-MVYGDIKYLVLDEADTMFDRGFGPDIRKFL--VPLKNRASKPNGQGFQTVLV 136
H+E+ ++KYL++DEAD + D FGP I K L +P + R T+L
Sbjct: 177 DHLENTKGFSLKNLKYLIMDEADRLLDMDFGPIIDKILKIIPHERR----------TLLF 226
Query: 137 SATMTKAVQKLVDEECQGIAHLRTSTLHKKIAS--ARHDFIKLSGSENKLEALLQVLEPS 194
SATMT V+KL + S+ + + R+ F + L L+ L
Sbjct: 227 SATMTSKVEKLQRASLHQPVRVAVSSKFSTVDTLIQRYLFFPFKHKDTYLVYLVNEL--- 283
Query: 195 LSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPTL 254
GN +++F T+N ++ + L S + HG++ R+ LNKFK+ G TL
Sbjct: 284 --AGNSIIIFARTVNDTQRLAILLRTLGFSAIPLHGQLSQSNRLGALNKFKS--GARSTL 339
Query: 255 VCTDLAARGLDLD-VDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDVLLADR 313
V TD+AARGLD+ VD VI +D P +S Y+HR GRTAR G GK +LV + D+ R
Sbjct: 340 VATDVAARGLDIPLVDVVINYDIPTDSKAYIHRVGRTARAGRAGKSIALVTQYDLEPFLR 399
Query: 314 IEEAIRK 320
IE I K
Sbjct: 400 IEATIGK 406
>sp|Q088J2|RHLB_SHEFN ATP-dependent RNA helicase RhlB OS=Shewanella frigidimarina (strain
NCIMB 400) GN=rhlB PE=3 SV=1
Length = 434
Score = 155 bits (391), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 159/306 (51%), Gaps = 12/306 (3%)
Query: 14 KPRRPRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVG 73
K PRA+++ PTREL+ Q+ + AK ++ H + +V GG Q L+ +D+++G
Sbjct: 81 KATEPRAIIMAPTRELAIQIAKDAKLLAAHTGLKVGIVYGGESYETQRAVLDKGVDILIG 140
Query: 74 TPGRILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQT 133
T GRI+ ++ G + I+ +VLDEAD MFD GF DIR + + S+ N
Sbjct: 141 TTGRIIDYVRQGVISLSHIQAVVLDEADRMFDLGFIKDIRFLFRRMPDAKSRLN------ 194
Query: 134 VLVSATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEP 193
+L SAT++ VQ+L + + L K + + + S E+K+ LL ++E
Sbjct: 195 MLFSATLSMKVQELAYDHMNDPEKVEIEPLEKTSKNIKEEIFYPS-MEDKMRLLLSLIEE 253
Query: 194 SLSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPT 253
+K +VF NT +S + +L + G+VP ++R+ L +F + G+
Sbjct: 254 DWP--DKAIVFSNTKHSCEKLWSYLEGDGHRVGLLTGDVPQKKRIRILEQFTS--GEIDV 309
Query: 254 LVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDVLLAD 312
LV TD+AARGL + DV HV +D P + DY+HR GRT R G KG S ++ L
Sbjct: 310 LVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGISISFACEEYALNLP 369
Query: 313 RIEEAI 318
IE I
Sbjct: 370 EIETYI 375
>sp|Q12S35|RHLB_SHEDO ATP-dependent RNA helicase RhlB OS=Shewanella denitrificans (strain
OS217 / ATCC BAA-1090 / DSM 15013) GN=rhlB PE=3 SV=1
Length = 432
Score = 155 bits (391), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 161/303 (53%), Gaps = 12/303 (3%)
Query: 17 RPRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPG 76
+PRA+++ PTREL+ Q+ + A ++ H + +V GG Q + L+ +D+++GT G
Sbjct: 84 QPRAIIMAPTRELAIQIAKDANLLAKHTGLKVGIVYGGESYEVQREVLDKGVDILIGTTG 143
Query: 77 RILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLV 136
RI+ ++ G + I+ +VLDEAD MFD GF DIR + + +S+ N +L
Sbjct: 144 RIIDYVRQGVISLNSIQAVVLDEADRMFDLGFIKDIRFLFRRMPDASSRLN------MLF 197
Query: 137 SATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLS 196
SAT++ VQ+L + + + K + + + S +E+K+ LL ++E
Sbjct: 198 SATLSMKVQELAYDHMNDPEKVEVTPEEKTSKNIKEEIFYPS-TEDKMRLLLTLMEEDWP 256
Query: 197 KGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPTLVC 256
+ K +VF NT +S + +L + G+VP ++R+ L +F + GD LV
Sbjct: 257 E--KAIVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTS--GDLDVLVA 312
Query: 257 TDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDVLLADRIE 315
TD+AARGL + DV HV +D P + DY+HR GRT R G KG S + L IE
Sbjct: 313 TDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSVSFACETYALNLPAIE 372
Query: 316 EAI 318
+ I
Sbjct: 373 QYI 375
>sp|A4QSS5|DBP2_MAGO7 ATP-dependent RNA helicase DBP2 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=DBP2 PE=3 SV=1
Length = 548
Score = 154 bits (390), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 156/293 (53%), Gaps = 22/293 (7%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P ++L PTREL+ Q+ +R R+T V GG PQ L+ +++ + TPGR
Sbjct: 199 PIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGR 258
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
++ +E G + YLVLDEAD M D GF P IRK + + +P+ QT++ S
Sbjct: 259 LIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQI-----RPD---RQTLMWS 310
Query: 138 ATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKL----SGSENK---LEALLQV 190
AT K V+ + + Q + +L SA H ++ S SE + + + +V
Sbjct: 311 ATWPKEVRNMAADFLQDFIQVNIGSLD---LSANHRITQIVEVVSESEKRDRMIRHMEKV 367
Query: 191 LEPSLSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGD 250
++ SK NK+++F T + + FL ++ ++ HG+ ER L++FK G
Sbjct: 368 MDGKDSK-NKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKT--GK 424
Query: 251 CPTLVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSL 302
P +V TD+A+RG+D+ ++ HV+ +D+P NS DY+HR GRT R GAKG +
Sbjct: 425 SPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITF 477
>sp|P0CR00|RRP3_CRYNJ ATP-dependent rRNA helicase RRP3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=RRP3 PE=3 SV=1
Length = 484
Score = 154 bits (390), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 112/305 (36%), Positives = 159/305 (52%), Gaps = 19/305 (6%)
Query: 20 AVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGRIL 79
A+VL PTREL+ Q+ + S+ R+ ++ GG + Q +L+ ++V TPGR++
Sbjct: 109 ALVLAPTRELAYQISQQVTSLGSGIGVRTAVLVGGMDMMSQSIALSKRPHIIVATPGRLM 168
Query: 80 QHIEDGN-MVYGDIKYLVLDEADTMFDRGFGPDIRKFL--VPLKNRASKPNGQGFQTVLV 136
H+E+ +KYLV+DEAD + D FGP I K L +P K R T L
Sbjct: 169 DHLENTKGFSLKSLKYLVMDEADRLLDLDFGPIIDKILKVIP-KER---------NTYLF 218
Query: 137 SATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLS 196
SATMT V KL + S+ + + S L +NK +A L L LS
Sbjct: 219 SATMTTKVAKLQRASLNKPVRVEVSSKYSTV-STLLQHYLLLPLKNK-DAYLLYLANELS 276
Query: 197 KGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPTLVC 256
+ +M+F T+ S+ + L + HG++ R+ +LNKFK+ G LV
Sbjct: 277 SSS-MMIFTRTVADSQRLSIILRRLGFPAIPLHGQMTQSLRLASLNKFKS--GGRSILVA 333
Query: 257 TDLAARGLDLD-VDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDVLLADRIE 315
TD+A+RGLD+ VD VI +D P NS DY+HR GRTAR G GK +LV + DV + RIE
Sbjct: 334 TDVASRGLDIPLVDLVINYDMPTNSKDYVHRVGRTARAGRSGKSITLVTQYDVEILQRIE 393
Query: 316 EAIRK 320
I K
Sbjct: 394 SHIGK 398
>sp|P0CR01|RRP3_CRYNB ATP-dependent rRNA helicase RRP3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=RRP3 PE=3 SV=1
Length = 484
Score = 154 bits (390), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 112/305 (36%), Positives = 159/305 (52%), Gaps = 19/305 (6%)
Query: 20 AVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGRIL 79
A+VL PTREL+ Q+ + S+ R+ ++ GG + Q +L+ ++V TPGR++
Sbjct: 109 ALVLAPTRELAYQISQQVTSLGSGIGVRTAVLVGGMDMMSQSIALSKRPHIIVATPGRLM 168
Query: 80 QHIEDGN-MVYGDIKYLVLDEADTMFDRGFGPDIRKFL--VPLKNRASKPNGQGFQTVLV 136
H+E+ +KYLV+DEAD + D FGP I K L +P K R T L
Sbjct: 169 DHLENTKGFSLKSLKYLVMDEADRLLDLDFGPIIDKILKVIP-KER---------NTYLF 218
Query: 137 SATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLS 196
SATMT V KL + S+ + + S L +NK +A L L LS
Sbjct: 219 SATMTTKVAKLQRASLNKPVRVEVSSKYSTV-STLLQHYLLLPLKNK-DAYLLYLANELS 276
Query: 197 KGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPTLVC 256
+ +M+F T+ S+ + L + HG++ R+ +LNKFK+ G LV
Sbjct: 277 SSS-MMIFTRTVADSQRLSIILRRLGFPAIPLHGQMTQSLRLASLNKFKS--GGRSILVA 333
Query: 257 TDLAARGLDLD-VDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDVLLADRIE 315
TD+A+RGLD+ VD VI +D P NS DY+HR GRTAR G GK +LV + DV + RIE
Sbjct: 334 TDVASRGLDIPLVDLVINYDMPTNSKDYVHRVGRTARAGRSGKSITLVTQYDVEILQRIE 393
Query: 316 EAIRK 320
I K
Sbjct: 394 SHIGK 398
>sp|Q6YS30|RH5_ORYSJ DEAD-box ATP-dependent RNA helicase 5 OS=Oryza sativa subsp.
japonica GN=Os07g0301200 PE=2 SV=1
Length = 512
Score = 154 bits (389), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 160/314 (50%), Gaps = 29/314 (9%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
PR +VL PTREL++Q+ V S + GG PQ +L + +D+V+GTPGR
Sbjct: 168 PRVLVLSPTRELAQQIADVLCEAGAPCGISSVCLYGGTSKGPQISALKSGVDIVIGTPGR 227
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
+ IE G D+ ++VLDEAD M D GF P++R L QTV+ S
Sbjct: 228 MKDLIEMGICRLNDVSFVVLDEADRMLDMGFEPEVRAIL--------SQTASVRQTVMFS 279
Query: 138 ATMTKAVQKLVDEECQGIAHLRTSTLHKKIAS----ARHDFIKL------SGSENKLEAL 187
AT AV +L E + + + I S A HD +++ +++L AL
Sbjct: 280 ATWPPAVHQLAQE------FMDPNPIKVVIGSEDLAANHDVMQIVEVLDDRSRDSRLVAL 333
Query: 188 LQVLEPSLSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNE 247
L ++ N+V+VF + V+ L S V+ HG+ +R + L+ FK
Sbjct: 334 LDKYHK--AQRNRVLVFVLYKREATRVETMLQRRGWSAVSVHGDKAQHDRTKALSLFK-- 389
Query: 248 DGDCPTLVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKK 306
+G CP ++ TD+A+RGLD+ DV+ VI + +PL + DY+HR GRT R G KG + ++
Sbjct: 390 EGSCPLMIATDVASRGLDIPDVEVVINYSYPLTTEDYVHRIGRTGRAGKKGVAHTFFTQE 449
Query: 307 DVLLADRIEEAIRK 320
+ LA + +R+
Sbjct: 450 NKGLAGELVNVLRE 463
>sp|Q4P3U9|RRP3_USTMA ATP-dependent rRNA helicase RRP3 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=RRP3 PE=3 SV=1
Length = 551
Score = 154 bits (389), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 162/309 (52%), Gaps = 21/309 (6%)
Query: 15 PRRPRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGT 74
P+ A VL PTREL+ Q+ + +++ RS + GG + Q +L+ ++V T
Sbjct: 170 PKPFFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSIALSKRPHVIVAT 229
Query: 75 PGRILQHIED--GNMVYGDIKYLVLDEADTMFDRGFGPDIRKFL--VPLKNRASKPNGQG 130
PGR+ H+E+ G + G ++YLV+DEAD + D FGP I K L +P + R
Sbjct: 230 PGRLQDHLENTKGFSLRG-LQYLVMDEADRLLDMDFGPIIDKLLQSIPRERR-------- 280
Query: 131 FQTVLVSATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKLSGSENKLEALLQV 190
T+L SATMT V KL + + T + +++ + ++ + + +
Sbjct: 281 --TMLFSATMTTKVAKLQRASLKNPVRVEVDTKYTTVSTLKQHYMFMPFAHKDTYLVHLA 338
Query: 191 LEPSLSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGD 250
E + G+ ++VF T++ S+ + L + HG++ Q R+ LNKFK G
Sbjct: 339 NEQA---GHSIIVFTRTVHDSQRLSILLRLLGFPAIPLHGQLSQQARLGALNKFKT--GG 393
Query: 251 CPTLVCTDLAARGLDLD-VDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDVL 309
LV TD+A+RGLD+ VD V+ +D P NS DY+HR GRTAR G G+ +LV + DV
Sbjct: 394 RSILVATDVASRGLDIPAVDLVVNYDIPTNSKDYIHRVGRTARAGRSGRSVTLVTQYDVE 453
Query: 310 LADRIEEAI 318
L RIE I
Sbjct: 454 LLQRIEAVI 462
>sp|Q75HJ0|RH37_ORYSJ DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa subsp.
japonica GN=PL10A PE=2 SV=1
Length = 637
Score = 154 bits (389), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 106/313 (33%), Positives = 159/313 (50%), Gaps = 25/313 (7%)
Query: 15 PRRPR--------AVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNN 66
P+RPR A++L PTRELS Q+ A+ ++ R + GG + Q L
Sbjct: 242 PQRPRGSRTAYPLALILSPTRELSVQIHEEARKFAYQTGVRVVVAYGGAPIHQQLRELER 301
Query: 67 PIDMVVGTPGRILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKP 126
++++V TPGR++ +E + +KYL LDEAD M D GF P IRK + + P
Sbjct: 302 GVEILVATPGRLMDLLERARVSLQMVKYLALDEADRMLDMGFEPQIRKIV----EQMDMP 357
Query: 127 NGQGFQTVLVSATMTKAVQK-----LVDEECQGIAHLRTSTLHKKIASARHDFIKLSGSE 181
QT+L SAT K +Q+ L D + + +ST + + R +F+ +
Sbjct: 358 PRGVRQTMLFSATFPKEIQRMASDFLADYIFLAVGRVGSST---DLIAQRVEFVLEADKR 414
Query: 182 NKLEALLQVLEPSLSKGNKV--MVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVE 239
+ L LL + + + G + +VF T + A++++L N + HG+ QER
Sbjct: 415 SYLMDLLHAQKANGTHGKQALTLVFVETKRGADALENWLYTNGFPATSIHGDRTQQEREY 474
Query: 240 NLNKFKNEDGDCPTLVCTDLAARGLDLD-VDHVIMFDFPLNSIDYLHRTGRTARMGAKGK 298
L FK+ G P LV TD+AARGLD+ V HVI FD P + DY+HR GRT R G G
Sbjct: 475 ALRSFKS--GATPILVATDVAARGLDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKSGL 532
Query: 299 VTSLVAKKDVLLA 311
T+ + ++ LA
Sbjct: 533 ATAFFNEGNLSLA 545
>sp|Q6Z4K6|RH52B_ORYSJ DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa subsp.
japonica GN=PL10B PE=2 SV=1
Length = 638
Score = 154 bits (389), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 159/311 (51%), Gaps = 17/311 (5%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P A++L PTRELS Q+ A+ ++ + + GG + Q L ++++V TPGR
Sbjct: 248 PLALILSPTRELSVQIHEEARKFAYQTGVKVVVAYGGAPITQQLRELERGVEILVATPGR 307
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
++ +E + IKYL LDEAD M D GF P IRK ++ P G+ QT+L S
Sbjct: 308 LMDLLERARVSLQMIKYLALDEADRMLDMGFEPQIRKI---VEQMDMPPRGER-QTMLFS 363
Query: 138 ATMTKAVQK-----LVDEECQGIAHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLE 192
AT K +Q+ L D + + +ST + R +F+ + + L LL
Sbjct: 364 ATFPKEIQRMASDFLADYIFLAVGRVGSST---DLIVQRVEFVLDADKRSYLMDLLHAQR 420
Query: 193 PSLSKGNKV--MVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGD 250
+ + G + +VF T + A++++L N + HG+ QER L FK+ G
Sbjct: 421 ANGTHGKQALTLVFVETKRGADALENWLYNNGFPATSIHGDRTQQEREYALRSFKS--GA 478
Query: 251 CPTLVCTDLAARGLDLD-VDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDVL 309
P LV TD+AARGLD+ V HVI FD P + DY+HR GRT R G G T+ + +
Sbjct: 479 TPILVATDVAARGLDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNESNTP 538
Query: 310 LADRIEEAIRK 320
LA + E +++
Sbjct: 539 LARPLSELMQE 549
>sp|A6SFW7|DBP2_BOTFB ATP-dependent RNA helicase dbp2 OS=Botryotinia fuckeliana (strain
B05.10) GN=dbp2 PE=3 SV=2
Length = 514
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 148/293 (50%), Gaps = 24/293 (8%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P +VL PTREL+ Q+ + +R R+T V GG Q L +++ + TPGR
Sbjct: 176 PIVLVLAPTRELAVQIQQEITKFGKSSRIRNTCVYGGVPKGGQIRDLAKGVEVCIATPGR 235
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
++ IE G + YLVLDEAD M D GF P IRK L + +P+ QT + S
Sbjct: 236 LIDMIESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKILGQI-----RPDR---QTCMWS 287
Query: 138 ATMTKAVQKLVDEECQ-----GIAHLRTSTLHK--KIASARHDFIKLSGSENKLEALLQV 190
AT K V+ L + I L S H+ +I +F K LE +++
Sbjct: 288 ATWPKEVRALASDYLNEFIQVNIGSLELSANHRITQIVEVVSEFEKRDKMTKHLEKIME- 346
Query: 191 LEPSLSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGD 250
K NK+++F T + + FL ++ ++ HG+ ER LN+FK G
Sbjct: 347 -----DKDNKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKT--GK 399
Query: 251 CPTLVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSL 302
P +V TD+A+RG+D+ ++ HV +D+P NS DY+HR GRT R G KG +L
Sbjct: 400 SPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYIHRIGRTGRAGQKGTAITL 452
>sp|Q1DP69|DBP2_COCIM ATP-dependent RNA helicase DBP2 OS=Coccidioides immitis (strain RS)
GN=DBP2 PE=3 SV=2
Length = 545
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 150/293 (51%), Gaps = 24/293 (8%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P +VL PTREL+ Q+ +R R+T V GG PQ L+ +++ + TPGR
Sbjct: 202 PIVLVLAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVPRGPQIRDLSRGVEVCIATPGR 261
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
++ +E G + YLVLDEAD M D GF P IRK + + +P+ QT + S
Sbjct: 262 LIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQI-----RPD---RQTCMWS 313
Query: 138 ATMTKAVQKLVDEECQ-------GIAHLRTSTLHKKIASARHDFIKLSGSENKLEALLQV 190
AT K V++L + G L + +I DF K N LE ++
Sbjct: 314 ATWPKEVRQLAHDFLHDYIQVYIGSQDLSANHRITQIVEIVSDFEKRDRMINHLERIMD- 372
Query: 191 LEPSLSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGD 250
K +K+++F T + + FL ++ ++ HG+ ER LN+FK G
Sbjct: 373 -----DKKSKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKT--GK 425
Query: 251 CPTLVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSL 302
P +V TD+A+RG+D+ D+ HV+ +D+P NS DY+HR GRT R GAKG +L
Sbjct: 426 SPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITL 478
>sp|A6RGE3|DBP2_AJECN ATP-dependent RNA helicase DBP2 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=DBP2 PE=3 SV=1
Length = 542
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 152/293 (51%), Gaps = 23/293 (7%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P +VL PTREL+ Q+ +R R+T V GG PQ L +++ + TPGR
Sbjct: 199 PIVLVLAPTRELAVQIQTEITKFGKSSRIRNTCVYGGVPKGPQIRDLTRGVEVCIATPGR 258
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
++ +E G + YLVLDEAD M D GF P IRK + + +P+ QT + S
Sbjct: 259 LIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQI-----RPDR---QTCMWS 310
Query: 138 ATMTKAVQKLVDEECQ-----GIAHLRTSTLHK--KIASARHDFIKLSGSENKLEALLQV 190
AT K V++L + I + S H+ +I +F K L+ +++
Sbjct: 311 ATWPKDVRQLAQDFLHDYIQVNIGSMDLSANHRITQIVEIVSEFEKRDRMAKHLDRIMEA 370
Query: 191 LEPSLSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGD 250
+K +KV++F T + + FL ++ ++ HG+ ER LN+FK G
Sbjct: 371 -----NKHSKVLIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKT--GK 423
Query: 251 CPTLVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSL 302
P +V TD+A+RG+D+ D+ HV+ +D+P NS DY+HR GRT R GAKG +L
Sbjct: 424 SPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITL 476
>sp|A7E449|DBP2_SCLS1 ATP-dependent RNA helicase dbp2 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=dbp2 PE=3 SV=1
Length = 572
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 148/293 (50%), Gaps = 24/293 (8%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P +VL PTREL+ Q+ + +R R+T V GG Q L +++ + TPGR
Sbjct: 223 PIVLVLAPTRELAVQIQQEITKFGKSSRIRNTCVYGGVPKGGQIRDLAKGVEVCIATPGR 282
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
++ IE G + YLVLDEAD M D GF P IRK L + +P+ QT + S
Sbjct: 283 LIDMIESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKILGQI-----RPDR---QTCMWS 334
Query: 138 ATMTKAVQKLVDEECQ-----GIAHLRTSTLHK--KIASARHDFIKLSGSENKLEALLQV 190
AT K V+ L + I L S H+ +I +F K LE +++
Sbjct: 335 ATWPKEVRALASDYLNDFIQVNIGSLELSANHRITQIVEVVSEFEKRDKMTKHLEKIME- 393
Query: 191 LEPSLSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGD 250
K NK+++F T + + FL ++ ++ HG+ ER LN+FK G
Sbjct: 394 -----DKDNKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKT--GK 446
Query: 251 CPTLVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSL 302
P +V TD+A+RG+D+ ++ HV +D+P NS DY+HR GRT R G KG +L
Sbjct: 447 SPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYIHRIGRTGRAGQKGTAITL 499
>sp|Q5JKF2|RH40_ORYSJ DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa subsp.
japonica GN=Os01g0549400 PE=2 SV=2
Length = 792
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 150/298 (50%), Gaps = 18/298 (6%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P +VL PTREL+ Q+ A +R ST + GG PQ L+ +D+VV TPGR
Sbjct: 223 PTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRDLDRGVDVVVATPGR 282
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
+ +E + + YLVLDEAD M D GF P IRK + + R QT++ +
Sbjct: 283 LNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRR--------QTLMYT 334
Query: 138 ATMTKAVQKLVDEECQGIAHLRTSTLHKKIA-SARHDFIKLSGSENKLEALLQVLEPSLS 196
AT K V+++ ++ + ++ + +A SA ++L KL L Q+L S
Sbjct: 335 ATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQILR-SQD 393
Query: 197 KGNKVMVFCNTLNSSRAVDHFLN--ENQISTVNYHGEVPAQERVENLNKFKNEDGDCPTL 254
G+KV++FC T R D Q HG+ ER + L+ F++ G P L
Sbjct: 394 SGSKVLIFCTT---KRMCDQLARTLTRQFGASAIHGDKSQSEREKVLSHFRS--GRSPIL 448
Query: 255 VCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDVLLA 311
V TD+AARGLD+ D+ VI +DFP DY+HR GRT R GA G + +D A
Sbjct: 449 VATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFFCDQDSKYA 506
>sp|Q9H0S4|DDX47_HUMAN Probable ATP-dependent RNA helicase DDX47 OS=Homo sapiens GN=DDX47
PE=1 SV=1
Length = 455
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 167/314 (53%), Gaps = 17/314 (5%)
Query: 10 GVLMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPID 69
+L P+R A+VL PTREL+ Q+ +++ +S ++ GG Q +L
Sbjct: 85 ALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH 144
Query: 70 MVVGTPGRILQHIEDGN-MVYGDIKYLVLDEADTMFDRGFGPDIRKFL-VPLKNRASKPN 127
+++ TPGR++ H+E+ +KYLV+DEAD + + F ++ K L V ++R
Sbjct: 145 IIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDR----- 199
Query: 128 GQGFQTVLVSATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKLSGSENKLEAL 187
+T L SATMTK VQKL + S+ ++ + + +I + S+ K L
Sbjct: 200 ----KTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIP-SKFKDTYL 254
Query: 188 LQVLEPSLSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNE 247
+ +L GN M+FC+T N+++ L + + HG++ +R+ +LNKFK +
Sbjct: 255 VYILNEL--AGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAK 312
Query: 248 DGDCPTLVCTDLAARGLDLD-VDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKK 306
L+ TD+A+RGLD+ VD V+ FD P +S DY+HR GRTAR G GK + V +
Sbjct: 313 ARSI--LLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQY 370
Query: 307 DVLLADRIEEAIRK 320
DV L RIE I K
Sbjct: 371 DVELFQRIEHLIGK 384
>sp|Q2H720|DBP2_CHAGB ATP-dependent RNA helicase DBP2 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=DBP2 PE=3 SV=1
Length = 562
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 149/289 (51%), Gaps = 14/289 (4%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P +VL PTREL+ Q+ + +R R+T V GG PQ L+ +++ + TPGR
Sbjct: 210 PIVLVLAPTRELAVQIQQEITKFGKSSRIRNTCVYGGVPKGPQTRDLSRGVEVCIATPGR 269
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
++ +E G + YLVLDEAD M D GF P IRK + + +P+ QT + S
Sbjct: 270 LIDMLESGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQI-----RPD---RQTCMWS 321
Query: 138 ATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSL-- 195
AT K V+ L + + ++ +++ K + +++ LE +
Sbjct: 322 ATWPKEVRALASDFLTDFIQVNIGSMDLAANHRITQVVEVVNESEKRDKMIKHLEKIMED 381
Query: 196 -SKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPTL 254
NK+++F T + + FL ++ ++ HG+ ER L++FK G P +
Sbjct: 382 KESQNKILIFTGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKT--GKSPIM 439
Query: 255 VCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSL 302
V TD+A+RG+D+ ++ HV+ +D+P NS DY+HR GRT R GAKG +
Sbjct: 440 VATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITF 488
>sp|P0CQ76|DBP2_CRYNJ ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=DBP2 PE=3 SV=1
Length = 540
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 154/307 (50%), Gaps = 11/307 (3%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P ++L PTREL+ Q+ A +R R+T + GG PQ L +++ V TPGR
Sbjct: 184 PIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGVEICVATPGR 243
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
++ +E G + YLV+DEAD M D GF P IRK + + +P+ QT+L S
Sbjct: 244 LIDMLETGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQI-----RPDR---QTLLFS 295
Query: 138 ATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLSK 197
AT K VQ+L + + +L +++ +K LL LE +
Sbjct: 296 ATWPKEVQRLAMDFLHDFIQVNIGSLDLTANHNVAQHVEVCTDFDKRSKLLSHLEKISQE 355
Query: 198 GNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPTLVCT 257
KV++F T + + FL + + HG+ ER L +FK+ G P ++ T
Sbjct: 356 NGKVLIFVATKRVADDLTKFLRMDGWPALAIHGDKQQAERDWVLAEFKS--GRSPIMLAT 413
Query: 258 DLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDVLLADRIEE 316
D+A+RGLD+ D+ +VI +DFP N DY+HR GRT R G KG + + A + +
Sbjct: 414 DVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKAARELVQ 473
Query: 317 AIRKNES 323
+R++++
Sbjct: 474 ILRESKA 480
>sp|P0CQ77|DBP2_CRYNB ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=DBP2 PE=3 SV=1
Length = 540
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 154/307 (50%), Gaps = 11/307 (3%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P ++L PTREL+ Q+ A +R R+T + GG PQ L +++ V TPGR
Sbjct: 184 PIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGVEICVATPGR 243
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
++ +E G + YLV+DEAD M D GF P IRK + + +P+ QT+L S
Sbjct: 244 LIDMLETGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQI-----RPDR---QTLLFS 295
Query: 138 ATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLSK 197
AT K VQ+L + + +L +++ +K LL LE +
Sbjct: 296 ATWPKEVQRLAMDFLHDFIQVNIGSLDLTANHNVAQHVEVCTDFDKRSKLLSHLEKISQE 355
Query: 198 GNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPTLVCT 257
KV++F T + + FL + + HG+ ER L +FK+ G P ++ T
Sbjct: 356 NGKVLIFVATKRVADDLTKFLRMDGWPALAIHGDKQQAERDWVLAEFKS--GRSPIMLAT 413
Query: 258 DLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDVLLADRIEE 316
D+A+RGLD+ D+ +VI +DFP N DY+HR GRT R G KG + + A + +
Sbjct: 414 DVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKAARELVQ 473
Query: 317 AIRKNES 323
+R++++
Sbjct: 474 ILRESKA 480
>sp|Q9C551|RH5_ARATH DEAD-box ATP-dependent RNA helicase 5 OS=Arabidopsis thaliana
GN=RH5 PE=1 SV=1
Length = 537
Score = 152 bits (385), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 150/291 (51%), Gaps = 29/291 (9%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P +VL PTREL+ Q+ V + +S V GG PQ ++ + +D+V+GTPGR
Sbjct: 192 PTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGR 251
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
+ IE + D+ ++VLDEAD M D GF +R F++ N+ Q V+ S
Sbjct: 252 LRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVR-FILSNTNKVR-------QMVMFS 303
Query: 138 ATMTKAVQKLVDEECQGIAHLRTSTLHKKIAS----ARHDFIKL------SGSENKLEAL 187
AT V KL E + + + I S A HD +++ + +L AL
Sbjct: 304 ATWPLDVHKLAQE------FMDPNPIKVIIGSVDLAANHDVMQIIEVLDERARDQRLIAL 357
Query: 188 LQVLEPSLSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNE 247
L+ S+ N+V+VF + ++ FL + V+ HG ER +L+ FK
Sbjct: 358 LEKYHK--SQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFK-- 413
Query: 248 DGDCPTLVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKG 297
+G CP LV TD+AARGLD+ DV+ VI + FPL + DY+HR GRT R G KG
Sbjct: 414 EGSCPLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKG 464
>sp|Q755N4|DBP2_ASHGO ATP-dependent RNA helicase DBP2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DBP2
PE=3 SV=2
Length = 557
Score = 152 bits (385), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 158/305 (51%), Gaps = 12/305 (3%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P +VL PTREL+ Q+ + +R R+T V GG Q L +++++ TPGR
Sbjct: 188 PVVLVLAPTRELAVQIQKECSKFGRSSRIRNTCVYGGVPKSQQIRDLQRGVEILIATPGR 247
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
++ +E G + YLVLDEAD M D GF P IRK + + +P+ QT++ S
Sbjct: 248 LIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI-----RPD---RQTLMWS 299
Query: 138 ATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLE-PSLS 196
AT K VQ+L + + +L + +++ +K + L++ LE S
Sbjct: 300 ATWPKEVQQLARDYLHDPIQVNIGSLELAASHTITQLVEVVSDFDKRDRLVKHLEIASKD 359
Query: 197 KGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPTLVC 256
K +K+++F +T + + +L ++ + HG+ QER LN+F+ G P +V
Sbjct: 360 KDSKIIIFASTKRTCDEITSYLRQDGWPALAIHGDKQQQERDWVLNEFRT--GRSPIMVA 417
Query: 257 TDLAARGLDLD-VDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDVLLADRIE 315
TD+AARG+D+ ++ VI +D P N DY+HR GRT R GA G S + + L ++
Sbjct: 418 TDVAARGIDVKGINFVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEANKTLGAQLI 477
Query: 316 EAIRK 320
+R+
Sbjct: 478 SIMRE 482
>sp|Q2UMH8|DBP3_ASPOR ATP-dependent RNA helicase dbp3 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=dbp3 PE=3 SV=1
Length = 498
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/315 (34%), Positives = 153/315 (48%), Gaps = 27/315 (8%)
Query: 4 HDEAMLGVLMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDS 63
D AM KP RP AV++ PTREL+ Q++ S R V GG R Q ++
Sbjct: 143 QDSAM--TKQKPYRPLAVIISPTRELAMQIYDQLLKFSGSVGVRVACVFGGVRKEEQREA 200
Query: 64 LNNPIDMVVGTPGRILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRA 123
L +VV TPGR+ DG++ G +KYLVLDEAD M D+GF DI+ + P+
Sbjct: 201 LKT-AGVVVATPGRLKDLQNDGSVDLGKVKYLVLDEADRMLDKGFEQDIKDIIRPMP--V 257
Query: 124 SKPNGQGFQTVLVSATMTKAVQKLVDEECQG----------IAHLRTSTLHKKIASARHD 173
SK QT++ +AT +V+ L A R +T K++ +
Sbjct: 258 SK-----RQTIMFTATWPPSVRDLASTFMSSPVTVTIGGDPSADPRANTRIKQVV----E 308
Query: 174 FIKLSGSENKLEALLQVLEPSLSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVP 233
+K E++L LL + + + KV+ FC + ++ L HG++
Sbjct: 309 VVKPHEKESRLVQLLNRSQRGVPEPEKVLAFCLYKKEAMRIERLLRTKGFKVAGIHGDLS 368
Query: 234 AQERVENLNKFKNEDGDCPTLVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTAR 292
QER +L+ FK G LV TD+AARGLD+ V VI FPL DY+HR GRT R
Sbjct: 369 QQERFRSLDAFKT--GAATVLVATDVAARGLDIPSVKQVINVTFPLTVEDYVHRIGRTGR 426
Query: 293 MGAKGKVTSLVAKKD 307
GA+G +L + D
Sbjct: 427 AGAEGHAVTLFTETD 441
>sp|Q879Y6|RHLB_XYLFT ATP-dependent RNA helicase RhlB OS=Xylella fastidiosa (strain
Temecula1 / ATCC 700964) GN=rhlB PE=3 SV=1
Length = 543
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 156/308 (50%), Gaps = 13/308 (4%)
Query: 15 PRRPRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGT 74
P PRA++L PTREL+ Q++ A + R ++ GG Q + L D+V+ T
Sbjct: 82 PEDPRALILAPTRELAIQIYNDAVKFGGNLGLRFALIYGGVDYDRQREMLRKGADVVIAT 141
Query: 75 PGRILQHIEDGNMVYGDI-KYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQT 133
PGR++ +++ +V + + VLDEAD MFD GF DIR L L R S+ QT
Sbjct: 142 PGRLIDYLKQHEVVSLRVCEICVLDEADRMFDLGFIKDIRFILRRLPERCSR------QT 195
Query: 134 VLVSATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEP 193
+L SAT++ V +L E L T R I E K+ LL +L
Sbjct: 196 LLFSATLSHRVLELAYEYMNEPEKLVAETESVTTTRVRQR-IYFPAEEEKIPLLLGLL-- 252
Query: 194 SLSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPT 253
S ++G + MVF NT V L+E G+VP ++R LN+F+ G
Sbjct: 253 SRNEGMRTMVFVNTKVFVEGVARALDEAGYRVGVLSGDVPQRKRETLLNRFQK--GQLEI 310
Query: 254 LVCTDLAARGLDLD-VDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDVLLAD 312
LV TD+AARGL +D V++V +D P ++ DY+HR GRTAR+GA G S ++ +
Sbjct: 311 LVATDVAARGLHIDGVNYVYNYDLPFDAEDYVHRIGRTARLGADGDAISFACERYAMSLP 370
Query: 313 RIEEAIRK 320
IE I +
Sbjct: 371 DIEAYIEQ 378
>sp|B8CHZ1|RHLB_SHEPW ATP-dependent RNA helicase RhlB OS=Shewanella piezotolerans (strain
WP3 / JCM 13877) GN=rhlB PE=3 SV=1
Length = 437
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 159/307 (51%), Gaps = 12/307 (3%)
Query: 14 KPRRPRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVG 73
K +PRA+++ PTREL+ Q+ + A ++ H + +V GG Q L+ ID+++G
Sbjct: 81 KINQPRAIIMAPTRELAIQIAKDANLLAKHTGLKVGIVYGGEGYEAQRKVLDKGIDILIG 140
Query: 74 TPGRILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQT 133
T GRI+ ++ G + I+ +VLDEAD MFD GF DIR + + S+ N
Sbjct: 141 TTGRIIDYVRQGVIDVSAIQAVVLDEADRMFDLGFIKDIRFLFRRMPDAKSRLN------ 194
Query: 134 VLVSATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEP 193
+L SAT++ VQ+L + + + K + + + S E K+ LL +LE
Sbjct: 195 MLFSATLSMKVQELAYDHMNEPEKVEIAPNEKTSKNIKEEIFYPS-MEEKMPLLLSLLEE 253
Query: 194 SLSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPT 253
+ K +VF NT +S V +L + G+VP ++R+ L +F + GD
Sbjct: 254 DWPE--KAIVFSNTKHSCEKVWSWLEGDGHRVGLLTGDVPQKKRLRILEQFTS--GDIDV 309
Query: 254 LVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDVLLAD 312
LV TD+AARGL + DV HV +D P + DY+HR GRT R G KG S ++ L
Sbjct: 310 LVATDVAARGLHIADVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGVSVSFACEEYALNLP 369
Query: 313 RIEEAIR 319
IE I+
Sbjct: 370 AIESYIQ 376
>sp|Q75B50|DED1_ASHGO ATP-dependent RNA helicase DED1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DED1
PE=3 SV=2
Length = 623
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 153/313 (48%), Gaps = 14/313 (4%)
Query: 10 GVLMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPID 69
G M+ P AVVL PTREL+ Q+F AK ++ + + +V GG +R Q L D
Sbjct: 221 GYYMRKAYPTAVVLAPTRELATQIFDEAKKFTYRSWVKPCVVYGGADIRQQIRELERGCD 280
Query: 70 MVVGTPGRILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQ 129
++V TPGR+ +E G + +KYLVLDEAD M D GF P IR + P +
Sbjct: 281 LIVATPGRLNDLLERGKISLCSVKYLVLDEADRMLDMGFEPQIRHIV----EGCDMPTVE 336
Query: 130 GFQTVLVSATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKLSGSENKLEALLQ 189
QT++ SAT +Q L + + L + + + + + K LL
Sbjct: 337 NRQTLMFSATFPTDIQHLAADFLKDYIFLSVGRVGSTSENITQKVLHVEDID-KRSVLLD 395
Query: 190 VLEPSLSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDG 249
+L + S G +VF T + A+ FL +S HG+ ER L F+ G
Sbjct: 396 LL--AASDGGLTLVFVETKRMADALTDFLIMQNLSATAIHGDRTQAERERALAFFRT--G 451
Query: 250 DCPTLVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLV--AKK 306
LV T +AARGLD+ +V HVI +D P + DY+HR GRT R G G T+ K
Sbjct: 452 RANVLVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRIGRTGRAGNTGLATAFFNRGNK 511
Query: 307 DVL--LADRIEEA 317
+V+ L D +EEA
Sbjct: 512 NVVKELVDILEEA 524
>sp|Q8H136|RH14_ARATH DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana
GN=RH14 PE=1 SV=2
Length = 619
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 150/299 (50%), Gaps = 28/299 (9%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P +VL PTREL+ Q+ A +R T + GG PQ L D+VV TPGR
Sbjct: 231 PTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGR 290
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFL--VPLKNRASKPNGQGFQTVL 135
+ +E + I YLVLDEAD M D GF P IRK + +P K QT++
Sbjct: 291 LNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKR----------QTLM 340
Query: 136 VSATMTKAVQKLVDEECQGIAHLRTSTLHKKIAS---ARH-DFIKLSGSENKLEALLQVL 191
+AT K V+K+ + A + + + +A+ +H + + + +LE +L+
Sbjct: 341 YTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQ 400
Query: 192 EPSLSKGNKVMVFCNTLNSSRAVDHFLNE--NQISTVNYHGEVPAQERVENLNKFKNEDG 249
EP G+KV++FC+T R D Q HG+ ER LN+F++ G
Sbjct: 401 EP----GSKVIIFCST---KRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRS--G 451
Query: 250 DCPTLVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKD 307
P LV TD+AARGLD+ D+ V+ +DFP DY+HR GRT R GA G+ + +D
Sbjct: 452 RTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQD 510
>sp|P24782|DBP2_SCHPO ATP-dependent RNA helicase dbp2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dbp2 PE=2 SV=2
Length = 550
Score = 152 bits (383), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 147/282 (52%), Gaps = 12/282 (4%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P +VL PTREL+ Q+ + +R R+T V GG PQ L +++ + TPGR
Sbjct: 196 PIVLVLAPTRELAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQIRDLIRGVEICIATPGR 255
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
+L ++ + YLVLDEAD M D GF P IRK + + +P+ QTV+ S
Sbjct: 256 LLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQI-----RPD---RQTVMFS 307
Query: 138 ATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLS- 196
AT K VQ+L + + +L + +++ + +K L + +E L
Sbjct: 308 ATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIVEVVDNADKRARLGKDIEEVLKD 367
Query: 197 KGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPTLVC 256
+ NKV++F T + + FL ++ + HG+ ER LN+F+ G P +V
Sbjct: 368 RDNKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRT--GKSPIMVA 425
Query: 257 TDLAARGLDLD-VDHVIMFDFPLNSIDYLHRTGRTARMGAKG 297
TD+A+RG+D+ + HV +DFP N+ DY+HR GRT R GAKG
Sbjct: 426 TDVASRGIDVKGITHVFNYDFPGNTEDYVHRIGRTGRAGAKG 467
>sp|A6VKC3|RHLB_ACTSZ ATP-dependent RNA helicase RhlB OS=Actinobacillus succinogenes
(strain ATCC 55618 / 130Z) GN=rhlB PE=3 SV=1
Length = 413
Score = 152 bits (383), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 161/303 (53%), Gaps = 12/303 (3%)
Query: 17 RPRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPG 76
+PRA++L PTREL+ Q+ A+S++ + R + GG Q ++ N +D+++GT G
Sbjct: 82 QPRALILAPTRELAVQIAHDAESLAQTTKLRIALAYGGDGYDKQLKTIENGVDILIGTTG 141
Query: 77 RILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLV 136
R++ +++ G + + DI+ +VLDEAD MFD GF DIR L + P + T+L
Sbjct: 142 RVIDYVKQGIIRFNDIQVVVLDEADRMFDLGFIKDIRYLL----RKCPAPKSR--LTMLF 195
Query: 137 SATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLS 196
SAT++ V++L E+ ++ L K + + S + +K+ L+ +LE
Sbjct: 196 SATLSYKVRELAFEDMNDPEYIEIEPLQKTGHRIKEELFYPS-NRDKMALLMTLLEEEWP 254
Query: 197 KGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPTLVC 256
+ + ++F NT + + +L + G+V ++R+ L +F DG+ LV
Sbjct: 255 E--RCIIFANTKHRCEEIWGYLAADGQRVGLLTGDVAQKKRLALLKQFT--DGELDILVA 310
Query: 257 TDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDVLLADRIE 315
TD+AARGL + DV HV +D P + DY+HR GRT R G G S ++ + IE
Sbjct: 311 TDVAARGLHIPDVTHVFNYDLPDDREDYVHRIGRTGRAGESGMSISFACEQYAMNLPAIE 370
Query: 316 EAI 318
E I
Sbjct: 371 EYI 373
>sp|Q501J6|DDX17_MOUSE Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus GN=Ddx17
PE=2 SV=1
Length = 650
Score = 152 bits (383), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 153/290 (52%), Gaps = 18/290 (6%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P +VL PTREL++QV +VA +R +ST + GG PQ L +++ + TPGR
Sbjct: 166 PICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 225
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
++ +E G YLVLDEAD M D GF P IRK + + +P+ QT++ S
Sbjct: 226 LIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-----RPD---RQTLMWS 277
Query: 138 ATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKL---SGSENKLEALLQVLEPS 194
AT K V++L ++ + + L SA H+ +++ K L+Q++E
Sbjct: 278 ATWPKEVRQLAEDFLRDYTQINVGNLE---LSANHNILQIVDVCMESEKDHKLIQLMEEI 334
Query: 195 LS-KGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPT 253
++ K NK ++F T + + + + HG+ ER LN+F++ G P
Sbjct: 335 MAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRS--GKAPI 392
Query: 254 LVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSL 302
L+ TD+A+RGLD+ DV VI +D+P +S DY+HR GRTAR KG +
Sbjct: 393 LIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTF 442
>sp|Q8LA13|RH11_ARATH DEAD-box ATP-dependent RNA helicase 11 OS=Arabidopsis thaliana
GN=RH11 PE=2 SV=1
Length = 612
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 9/306 (2%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P AV+L PTREL+ Q+ AK S+ + + GG + Q L D++V TPGR
Sbjct: 230 PFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGR 289
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
+ +E + I++L LDEAD M D GF P IRK + + P QT+L S
Sbjct: 290 LNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIV----EQMDMPPRGVRQTMLFS 345
Query: 138 ATMTKAVQKLVDEECQGIAHLRTSTLHKK--IASARHDFIKLSGSENKLEALLQVLEPSL 195
AT +Q+L + L + + + R +F++ S + L LL +
Sbjct: 346 ATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMDLLHAQRETQ 405
Query: 196 SKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPTLV 255
K + +VF T + ++++L N+ + HG+ QER L FK G P LV
Sbjct: 406 DKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKT--GRTPILV 463
Query: 256 CTDLAARGLDLD-VDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDVLLADRI 314
TD+AARGLD+ V HV+ FD P + DY+HR GRT R G G T+ + + LA +
Sbjct: 464 ATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSL 523
Query: 315 EEAIRK 320
E +++
Sbjct: 524 AELMQE 529
>sp|Q6C4D4|DBP2_YARLI ATP-dependent RNA helicase DBP2 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=DBP2 PE=3 SV=1
Length = 552
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 150/282 (53%), Gaps = 12/282 (4%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P +VL PTREL+ Q+ + ++ R+T V GG Q L +++V+ TPGR
Sbjct: 190 PIVLVLAPTRELAVQIQQECSKFGKSSKIRNTCVYGGVPRGQQIRDLARGVEIVIATPGR 249
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
+L +E G + YLVLDEAD M D GF P IRK + + +P+ QT++ S
Sbjct: 250 LLDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQI-----RPDR---QTLMWS 301
Query: 138 ATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSL-S 196
AT K VQ+L + + + +L + +++ K + L++ LE + +
Sbjct: 302 ATWPKEVQRLAHDYLKDQIQVNIGSLELSASHNITQVVEVCTEYEKRDRLVKHLETVMEN 361
Query: 197 KGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPTLVC 256
K +K ++F T + + FL ++ + HG+ QER LN+F+ G P +V
Sbjct: 362 KESKCLIFTGTKRVADDITKFLRQDGWPALAIHGDKQQQERDWVLNEFRQ--GKSPIMVA 419
Query: 257 TDLAARGLDLD-VDHVIMFDFPLNSIDYLHRTGRTARMGAKG 297
TD+A+RG+D+ ++ VI +D+P NS DY+HR GRT R G KG
Sbjct: 420 TDVASRGIDVKGINFVINYDYPSNSEDYVHRIGRTGRAGTKG 461
>sp|Q2HBE7|DED1_CHAGB ATP-dependent RNA helicase DED1 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=DED1 PE=3 SV=1
Length = 688
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 145/294 (49%), Gaps = 16/294 (5%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P A++L PTREL Q++ A+ ++ + R +V GG + Q + D++V TPGR
Sbjct: 283 PTALILAPTRELVSQIYEEARKFAYRSWVRPCVVYGGADIGSQLRQMERGCDLLVATPGR 342
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
++ IE G + +IKYLVLDEAD M D GF P IR+ + P QT++ S
Sbjct: 343 LVDLIERGRISLCNIKYLVLDEADRMLDMGFEPQIRRIV----QGEDMPTTGQRQTLMFS 398
Query: 138 ATMTKAVQKLVDEECQGIAHL---RTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPS 194
AT + +Q L + L R + + I ++ +K LL +L
Sbjct: 399 ATFPRDIQMLAQDFLNDYVFLSVGRVGSTSENITQK----VEYVEDVDKRSVLLDILH-- 452
Query: 195 LSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPTL 254
G ++F T + ++ FL + HG+ +ER L F+N G CP L
Sbjct: 453 THAGGLTLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRERERALELFRN--GKCPIL 510
Query: 255 VCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKD 307
V T +AARGLD+ +V HVI +D P + DY+HR GRT R G G T+ + +
Sbjct: 511 VATAVAARGLDIPNVTHVINYDLPTDVDDYVHRIGRTGRAGNTGIATAFFNRGN 564
>sp|Q92841|DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17 OS=Homo sapiens GN=DDX17
PE=1 SV=2
Length = 729
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 153/290 (52%), Gaps = 18/290 (6%)
Query: 18 PRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGR 77
P +VL PTREL++QV +VA +R +ST + GG PQ L +++ + TPGR
Sbjct: 245 PICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 304
Query: 78 ILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVS 137
++ +E G YLVLDEAD M D GF P IRK + + +P+ QT++ S
Sbjct: 305 LIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-----RPD---RQTLMWS 356
Query: 138 ATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKL---SGSENKLEALLQVLEPS 194
AT K V++L ++ + + L SA H+ +++ K L+Q++E
Sbjct: 357 ATWPKEVRQLAEDFLRDYTQINVGNLE---LSANHNILQIVDVCMESEKDHKLIQLMEEI 413
Query: 195 LS-KGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPT 253
++ K NK ++F T + + + + HG+ ER LN+F++ G P
Sbjct: 414 MAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRS--GKAPI 471
Query: 254 LVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSL 302
L+ TD+A+RGLD+ DV VI +D+P +S DY+HR GRTAR KG +
Sbjct: 472 LIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTF 521
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,080,219
Number of Sequences: 539616
Number of extensions: 4960364
Number of successful extensions: 17650
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1193
Number of HSP's successfully gapped in prelim test: 397
Number of HSP's that attempted gapping in prelim test: 12363
Number of HSP's gapped (non-prelim): 1892
length of query: 323
length of database: 191,569,459
effective HSP length: 117
effective length of query: 206
effective length of database: 128,434,387
effective search space: 26457483722
effective search space used: 26457483722
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)