BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047492
(806 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GZA6|PP113_ARATH Pentatricopeptide repeat-containing protein At1g71210
OS=Arabidopsis thaliana GN=At1g71210 PE=2 SV=1
Length = 879
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/778 (46%), Positives = 511/778 (65%), Gaps = 27/778 (3%)
Query: 28 KIFQIL--STHDDEDSASRFAADQALSELGIRLTESFALQVLNYGKKTKDVLSCLKFFDW 85
+IF IL ++D +D A LS L +RLTE F L VL++ + D+L CLKFFDW
Sbjct: 82 RIFDILRAPSNDGDDRAFYLH----LSNLRLRLTEKFVLDVLSHTRY--DILCCLKFFDW 135
Query: 86 AGRQPHFHHTRATFHAIFKLLHCAKLTPLMVDFLE-NYKKDRYYHQVRFNDTLVMGYALA 144
A RQP FHHTRATFHAIFK+L AKL LM+DFL+ + + H +R D LV+GYA+A
Sbjct: 136 AARQPGFHHTRATFHAIFKILRGAKLVTLMIDFLDRSVGFESCRHSLRLCDALVVGYAVA 195
Query: 145 GKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRGFENDVTRT 204
G+ DIAL FG MRF+G+DLD + YHVLLNALVE+ CFD+ V+ QIS+RGF VT +
Sbjct: 196 GRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFVCAVTHS 255
Query: 205 IMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDR 264
I++K CKQ K+DEA +Y + L+ G +GI+VDALC +F++A KLL++ K
Sbjct: 256 ILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIK-L 314
Query: 265 DDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLM 324
V +++AY++W+R L++AG L+ +FL+ + LEG EVFR+N +V +LLKEN L
Sbjct: 315 VGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLD 374
Query: 325 EVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLI 384
V+D+ +M +SP+ TMN LCFFCKAG VD A+ELY+SRSE G +P + YNYLI
Sbjct: 375 GVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLI 434
Query: 385 NSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIK 444
++LC + S +AY+VLK +ID G F G KT S L +ALC GK + ++LVI A ER++
Sbjct: 435 HTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLL 494
Query: 445 LRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARL 504
+ + K ISALC KVE +I+ ++ S + LI+G R DIAA+L
Sbjct: 495 PKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKL 554
Query: 505 LVEMEENGHKPTRALHRAVIRCLCNMETPAKQFL-QLLNMQLSHQETNFQIYNFFIDGAG 563
++ M+E G+ PTR+L+R VI+C+C ME+ K F LL QLS E Q YN FI+GAG
Sbjct: 555 IIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAG 614
Query: 564 HVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLK--------------RKNGIPRK-L 608
+P LAR VY++M R G+ P + SNILMLQSYLK R+ G +K L
Sbjct: 615 FAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKKRL 674
Query: 609 YNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLE 668
Y +IVGLCKA K + A F+ EM+ G+ PS+ECYE I+ LC+ + YD VG++N
Sbjct: 675 YQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFR 734
Query: 669 GHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQSKISLLGQLIGVFSGCIKVSQ 728
GR++T+FIGN LL +A+K++ +YEAW R+R + ++ ++ LG+LIG+FSG I +
Sbjct: 735 KSGRRITAFIGNVLLHNAMKSKGVYEAWTRMRN-IEDKIPEMKSLGELIGLFSGRIDMEV 793
Query: 729 DIEGLQKMIEQCFPLDTYTYNILLRRLSVSEIDHACELFNRMRRKGYEPDQWTFDILK 786
+++ L ++IE+C+PLD YTYN+LLR + +++ + A E+ R+ R+GY P++ T IL+
Sbjct: 794 ELKRLDEVIEKCYPLDMYTYNMLLRMIVMNQAEDAYEMVERIARRGYVPNERTDMILE 851
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 189 bits (481), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 169/685 (24%), Positives = 283/685 (41%), Gaps = 58/685 (8%)
Query: 88 RQPHFHHTRATFHAIFKLLHCAKLTPLMVDFLENYKKDRYYHQVRFNDTLVMGYALAGKP 147
R+ F + + + + +M+ + ++ Y V TL+ G+A G+
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 148 DIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRGFEND-VTRTIM 206
D AL L +M+ +D D Y+V +++ + G D +I G + D VT T M
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 207 LKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRDD 266
+ LCK ++DEAVE F+ L R + ++ +F++A LLE + +
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 267 VV----------------KLEKA-----------------YDVWLRNLVRAGRLDLALEF 293
+ K+++A Y++ + L RAG+LD A E
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFE- 398
Query: 294 LKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFC 353
L+ G P V N +V RL K +L E +F +M +PD +T +++
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 458
Query: 354 KAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKK 413
K G VD A ++Y+ + N IVY LI + G + +++ K+ I+ P +
Sbjct: 459 KVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQ 518
Query: 414 TLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSEL 473
L+ D + + G+ E+ + + R +Y I L KA Y + +
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM 578
Query: 474 SRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETP 533
V Y +I GF K + + A +LL EM+ G +PT + +VI L ++
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638
Query: 534 AKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQL------ 587
+ ++ + E N IY+ IDG G V R D A + E + + GL P L
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSL 698
Query: 588 ----------GSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGM 637
++ QS + K + Y LI GLCK K N A+ F +EM+ GM
Sbjct: 699 LDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM 758
Query: 638 YPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLL------HALKTRD 691
PS Y +I L N + + + +G S N ++ A+
Sbjct: 759 KPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFS 818
Query: 692 LYEAWIRLRGMLINEQSKISLLGQL 716
L+E R RG+ I+ ++ + LL L
Sbjct: 819 LFEE-TRRRGLPIHNKTCVVLLDTL 842
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 165/785 (21%), Positives = 312/785 (39%), Gaps = 107/785 (13%)
Query: 46 AADQALSELGIRLTESFALQVLNYGKKTKDVLSCLKFFDWAGRQPHFHHTRATFHAIFKL 105
+A+ LS L + F + VL ++ KDV +++F W R+ H +++++ +
Sbjct: 51 SAENTLSALSFKPQPEFVIGVL---RRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLV 107
Query: 106 LHCAKLTPLMVDFLENYKKDRYYHQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLD 165
+ + + L + V +V+G A K + MR
Sbjct: 108 MARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPA 167
Query: 166 DYAYHVLLNALVEQGCFDAVAVVSKQISMRGFENDVTR-TIMLKCLCKQKKIDEAVEYFQ 224
AY L+ A D + + +Q+ G+E V T +++ K+ ++D A+
Sbjct: 168 FSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLD 227
Query: 225 QLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRA 284
++ S +DA D+V Y+V + + +
Sbjct: 228 EMKSSS-----------LDA---------------------DIV----LYNVCIDSFGKV 251
Query: 285 GRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVT 344
G++D+A +F + G P+ + ++ L K NRL E ++F +++ + P
Sbjct: 252 GKVDMAWKFFHEIEA-NGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310
Query: 345 MNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSI 404
NT++ + AG D A L + + G P+ I YN ++ L G EA +V + +
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFE-EM 369
Query: 405 DHGLFPGKKTLSILADALCRDGK----FEQMKDLVIFALERNIKLRDVTYDKFISALCKA 460
P T +IL D LCR GK FE + L N++ ++ D+ LCK+
Sbjct: 370 KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDR----LCKS 425
Query: 461 NKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALH 520
K++ + E+ E T+ LI G K R D A ++ +M ++ + ++
Sbjct: 426 QKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVY 485
Query: 521 RAVIRCLCN---METPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYEL 577
++I+ N E K + ++N S + Q+ N ++D P+ RA++E
Sbjct: 486 TSLIKNFFNHGRKEDGHKIYKDMINQNCS---PDLQLLNTYMDCMFKAGEPEKGRAMFEE 542
Query: 578 MQRSGLVPQLGSNILMLQSYLK--------------RKNG--IPRKLYNTLIVGLCKAMK 621
++ VP S +++ +K ++ G + + YN +I G CK K
Sbjct: 543 IKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK 602
Query: 622 ANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNT 681
N A+ + EM+ G P++ Y +I L D
Sbjct: 603 VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY-------------------- 642
Query: 682 LLLHALKTRDLYEAWIRLRGMLINEQSKISLLGQLIGVFSGCIKVSQDIEGLQKMIEQCF 741
+L K++ + + + + LI F ++ + L++++++
Sbjct: 643 MLFEEAKSKRI--------------ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Query: 742 PLDTYTYNILLRRL-SVSEIDHACELFNRMRRKGYEPDQWTFDILKCGLYNCLRTDEAER 800
+ YT+N LL L EI+ A F M+ P+Q T+ IL GL + ++A
Sbjct: 689 TPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFV 748
Query: 801 RLEEM 805
+EM
Sbjct: 749 FWQEM 753
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 155/646 (23%), Positives = 262/646 (40%), Gaps = 74/646 (11%)
Query: 50 ALSELGIRLTESFALQVLNYGKKTKDVLSCLKFFDWAGRQPHFHHTRATFHAIFKLLHCA 109
ALS ++L +S Q D + L+ F+ A ++P+F A + I L +
Sbjct: 45 ALSSTDVKLLDSLRSQ--------PDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRS 96
Query: 110 KLTPLMVDFLENYKKDRYYHQVRFNDTLVMGYALAGKPDIALHLFGKMRFQ-GMDLDDYA 168
M LE+ K R L+ YA D L + M + G+ D +
Sbjct: 97 GSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHF 156
Query: 169 YHVLLNALVEQGCFDAVAVVSKQISMRGFENDV-TRTIMLKCLCK--------------- 212
Y+ +LN LV+ V + ++S+ G + DV T +++K LC+
Sbjct: 157 YNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMP 216
Query: 213 --------------------QKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFE 252
+ +D A+ +Q+V S + ++V CK R E
Sbjct: 217 SYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVE 276
Query: 253 QAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNF 312
A +++ ++D + ++ + L +AG + A+E + EGY P+V+ +N
Sbjct: 277 DALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ-EGYDPDVYTYNS 335
Query: 313 LVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFG 372
++S L K + E ++ M SP+ VT NT++ CK V+ A EL + + G
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 373 LSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQ-- 430
+ P+ +N LI LC + A E+ + G P + T ++L D+LC GK ++
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 431 --MKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQL 488
+K + + R++ +TY+ I CKANK I E+ + TY L
Sbjct: 456 NMLKQMELSGCARSV----ITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 489 IHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQ 548
I G KS R + AA+L+ +M G KP + + +++ C K + M +
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 549 ETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKL 608
E + Y I G R ++A + +Q G+ N P
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI------------------NLTPHA- 612
Query: 609 YNTLIVGLCKAMKANLAWGFMREM-RHNGMYPSMECYEELIKLLCS 653
YN +I GL + K A REM N P Y + + LC+
Sbjct: 613 YNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCN 658
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 126/522 (24%), Positives = 217/522 (41%), Gaps = 24/522 (4%)
Query: 274 YDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDM 333
Y+ L LV L L +E +K S+ G P+V FN L+ L + ++L + DM
Sbjct: 157 YNRMLNLLVDGNSLKL-VEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDM 215
Query: 334 KEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGST 393
+ PD T TV+ + + G +D A+ + + EFG S + + N +++ C +G
Sbjct: 216 PSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRV 275
Query: 394 HEAYEVLKN-SIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDK 452
+A ++ S G FP + T + L + LC+ G + +++ L+ TY+
Sbjct: 276 EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNS 335
Query: 453 FISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENG 512
IS LCK +V+ + ++ + + TY LI K N+ + A L + G
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 513 HKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLAR 572
P ++I+ LC M+ E + YN ID + D A
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 573 AVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREM 632
+ + M+ SG + + YNTLI G CKA K A EM
Sbjct: 456 NMLKQMELSGCARSVIT-------------------YNTLIDGFCKANKTREAEEIFDEM 496
Query: 633 RHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDL 692
+G+ + Y LI LC ++ + +M+ + G++ + N+LL H + D+
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDI 556
Query: 693 YEAWIRLRGMLINE-QSKISLLGQLIGVFSGCIKVSQDIEGLQKMIEQCFPLDTYTYNIL 751
+A ++ M N + I G LI +V + L+ + + L + YN +
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPV 616
Query: 752 LRRL-SVSEIDHACELFNRM-RRKGYEPDQWTFDILKCGLYN 791
++ L + A LF M + PD ++ I+ GL N
Sbjct: 617 IQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCN 658
Score = 120 bits (300), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 177/417 (42%), Gaps = 40/417 (9%)
Query: 127 YYHQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQG-CFDAV 185
+ Q FN TLV G AG A+ + M +G D D Y Y+ +++ L + G +AV
Sbjct: 292 FPDQYTFN-TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350
Query: 186 AVVSKQISMRGFENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDAL 245
V+ + I+ N VT ++ LCK+ +++EA E + L S ++ L
Sbjct: 351 EVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 246 CKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVP 305
C A +L E+ + + E Y++ + +L G+LD AL LK + L G
Sbjct: 411 CLTRNHRVAMELFEEMRSK-GCEPDEFTYNMLIDSLCSKGKLDEALNMLK-QMELSGCAR 468
Query: 306 EVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELY 365
V +N L+ K N+ E ++F +M+ +S + VT NT++ CK+ V+ A +L
Sbjct: 469 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 528
Query: 366 KSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRD 425
G P+ YN L+ C G +A ++++ +G P T L LC+
Sbjct: 529 DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Query: 426 GKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTY 485
G+ E V L R+I+++ + + + Y
Sbjct: 589 GRVE-----VASKLLRSIQMKGINL------------------------------TPHAY 613
Query: 486 IQLIHGFNKSNRADIAARLLVEM-EENGHKPTRALHRAVIRCLCNMETPAKQFLQLL 541
+I G + + A L EM E+N P +R V R LCN P ++ + L
Sbjct: 614 NPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFL 670
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 141/314 (44%), Gaps = 13/314 (4%)
Query: 135 DTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISM 194
++L+ G L +A+ LF +MR +G + D++ Y++L+++L +G D + KQ+ +
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463
Query: 195 RGFENDV-TRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQ 253
G V T ++ CK K EA E F ++ + ++D LCK+ R E
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 254 AGKLLEDFKDRDDVVKLEK----AYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFR 309
A +L++ +++ +K Y+ L + R G + A + +++ S G P++
Sbjct: 524 AAQLMDQM-----IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS-NGCEPDIVT 577
Query: 310 FNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRS 369
+ L+S L K R+ L ++ I+ N V+ + AI L++
Sbjct: 578 YGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREML 637
Query: 370 EFG-LSPNGIVYNYLINSLC-GDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGK 427
E P+ + Y + LC G G EA + L ++ G P +L +LA+ L
Sbjct: 638 EQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSM 697
Query: 428 FEQMKDLVIFALER 441
E + LV +++
Sbjct: 698 EETLVKLVNMVMQK 711
Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 137/320 (42%), Gaps = 25/320 (7%)
Query: 508 MEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGA--GHV 565
++E G KP + ++ L + + + M + + + +N I H
Sbjct: 145 IDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQ 204
Query: 566 KRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKN--GIPR--------------KLY 609
RP A + E M GLVP + ++Q Y++ + G R
Sbjct: 205 LRP--AILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSV 262
Query: 610 NTLIVGLCKAMKANLAWGFMREMRH-NGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLE 668
N ++ G CK + A F++EM + +G +P + L+ LC + + +M+ +
Sbjct: 263 NVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVML 322
Query: 669 GHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQSKISLL-GQLIGVFSGCIKVS 727
G + N+++ K ++ EA L M+ + S ++ LI +V
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVE 382
Query: 728 QDIEGLQKMIEQCFPLDTYTYNILLRRLSVSEIDH--ACELFNRMRRKGYEPDQWTFDIL 785
+ E + + + D T+N L++ L ++ +H A ELF MR KG EPD++T+++L
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTR-NHRVAMELFEEMRSKGCEPDEFTYNML 441
Query: 786 KCGLYNCLRTDEAERRLEEM 805
L + + DEA L++M
Sbjct: 442 IDSLCSKGKLDEALNMLKQM 461
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/444 (20%), Positives = 165/444 (37%), Gaps = 102/444 (22%)
Query: 370 EFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFE 429
EFGL P+ YN ++N L DG++ + E I H
Sbjct: 147 EFGLKPDTHFYNRMLNLLV-DGNSLKLVE-----ISHA---------------------- 178
Query: 430 QMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLI 489
+ ++ ++ ++ T++ I ALC+A+++ L+ ++ V E T+ ++
Sbjct: 179 ---KMSVWGIKPDVS----TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVM 231
Query: 490 HGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQE 549
G+ + D A R+ +M E G C+ S+
Sbjct: 232 QGYIEEGDLDGALRIREQMVEFG---------------CSW---------------SNVS 261
Query: 550 TNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLY 609
N ++ F +G + D + E+ + G P + +
Sbjct: 262 VNVIVHGFCKEG----RVEDALNFIQEMSNQDGFFPD-------------------QYTF 298
Query: 610 NTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEG 669
NTL+ GLCKA A M M G P + Y +I LC V V++ +
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT 358
Query: 670 HGRQVTSFIGNTLLLHALKTRDLYEAW-----IRLRGMLINEQSKISLLGQLIGVFSGCI 724
+ NTL+ K + EA + +G+L + + SL+ L C+
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL------CL 412
Query: 725 KVSQDI--EGLQKMIEQCFPLDTYTYNILLRRL-SVSEIDHACELFNRMRRKGYEPDQWT 781
+ + E ++M + D +TYN+L+ L S ++D A + +M G T
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472
Query: 782 FDILKCGLYNCLRTDEAERRLEEM 805
++ L G +T EAE +EM
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEM 496
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/466 (25%), Positives = 206/466 (44%), Gaps = 15/466 (3%)
Query: 118 FLENYKKDRYYHQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALV 177
FLEN + TL+ G+ GK A + + G D Y+V+++
Sbjct: 124 FLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYC 183
Query: 178 EQGCFDAVAVVSKQISMRGFENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFM 237
+ G + V ++S+ + VT +L+ LC K+ +A+E +++ R+C +
Sbjct: 184 KAGEINNALSVLDRMSVS--PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ-RDCYPDVI 240
Query: 238 I-GIVVDALCKNSRFEQAGKLLEDFKDR---DDVVKLEKAYDVWLRNLVRAGRLDLALEF 293
I+++A C++S A KLL++ +DR DVV Y+V + + + GRLD A++F
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVV----TYNVLVNGICKEGRLDEAIKF 296
Query: 294 LKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFC 353
L S G P V N ++ + R M+ L DM SP VT N ++ F C
Sbjct: 297 LNDMPS-SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 354 KAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKK 413
+ G++ AI++ + + G PN + YN L++ C + A E L+ + G +P
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415
Query: 414 TLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSEL 473
T + + ALC+DGK E +++ + +TY+ I L KA K + E+
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 474 SRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETP 533
+ TY L+ G ++ + D A + E E G +P +++ LC
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535
Query: 534 AKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQ 579
+ L+ M + N Y I+G + +A+ EL+
Sbjct: 536 DRAIDFLVFMINRGCKPNETSYTILIEGLAY---EGMAKEALELLN 578
Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 183/448 (40%), Gaps = 24/448 (5%)
Query: 204 TIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKD 263
T +++ C+ K +A + + L +++ CK A +L+
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV 200
Query: 264 RDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRL 323
DVV Y+ LR+L +G+L A+E L + Y P+V + L+ +++ +
Sbjct: 201 SPDVV----TYNTILRSLCDSGKLKQAMEVLDRMLQRDCY-PDVITYTILIEATCRDSGV 255
Query: 324 MEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYL 383
L +M++ +PD VT N ++ CK G +D AI+ G PN I +N +
Sbjct: 256 GHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNII 315
Query: 384 INSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNI 443
+ S+C G +A ++L + + G P T +IL + LCR G + D++ +
Sbjct: 316 LRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC 375
Query: 444 KLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAAR 503
+ ++Y+ + CK K++ + TY ++ K + + A
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 504 LLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAG 563
+L ++ G P + VI L K L M+ + + Y+ + G
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 564 HVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKAN 623
+ D A + +R G+ P N + +N++++GLCK+ + +
Sbjct: 496 REGKVDEAIKFFHEFERMGIRP----------------NAVT---FNSIMLGLCKSRQTD 536
Query: 624 LAWGFMREMRHNGMYPSMECYEELIKLL 651
A F+ M + G P+ Y LI+ L
Sbjct: 537 RAIDFLVFMINRGCKPNETSYTILIEGL 564
Score = 119 bits (299), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 125/530 (23%), Positives = 209/530 (39%), Gaps = 109/530 (20%)
Query: 278 LRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLV---SRLLKENRLMEVFDLFMDMK 334
LR +VR G L+ +FL++ G VP++ L+ RL K + ++ ++
Sbjct: 109 LRQMVRTGELEEGFKFLENM-VYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEIL---- 163
Query: 335 EGQIS-PDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGST 393
EG + PD +T N ++ +CKAG ++ A+ + S +SP+ + YN ++ SLC G
Sbjct: 164 EGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKL 220
Query: 394 HEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKF 453
+A EVL + +P T +IL +A CRD L+ +R VTY+
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 454 ISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGH 513
++ +C K R D A + L +M +G
Sbjct: 281 VNGIC-----------------------------------KEGRLDEAIKFLNDMPSSGC 305
Query: 514 KPTRALHRAVIRCLCNME---TPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDL 570
+P H ++R +C+ K +L S F I F+ ++ L
Sbjct: 306 QPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL-----CRKGLL 360
Query: 571 ARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKL-YNTLIVGLCKAMKANLAWGFM 629
RA+ +++++ +PQ G P L YN L+ G CK K + A ++
Sbjct: 361 GRAI-DILEK---MPQHGCQ--------------PNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 630 REMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKT 689
M G YP + Y ++ LC + V ++N L G NT
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT-------- 454
Query: 690 RDLYEAWIRLRGMLINEQSKISLLGQLIGVFSGCIKVSQDIEGLQKMIEQCFPLDTYTYN 749
+I+ +K G+ I + L +M + DT TY+
Sbjct: 455 -------------VIDGLAKAGKTGKAIKL-------------LDEMRAKDLKPDTITYS 488
Query: 750 ILLRRLS-VSEIDHACELFNRMRRKGYEPDQWTFDILKCGLYNCLRTDEA 798
L+ LS ++D A + F+ R G P+ TF+ + GL +TD A
Sbjct: 489 SLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRA 538
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 121/262 (46%), Gaps = 5/262 (1%)
Query: 150 ALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRGFE-NDVTRTIMLK 208
A L M +G +++L+N L +G + +++ G + N ++ +L
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH 387
Query: 209 CLCKQKKIDEAVEYFQQLVSGRECVSGFMI-GIVVDALCKNSRFEQAGKLLEDFKDRDDV 267
CK+KK+D A+EY +++VS R C + ++ ALCK+ + E A ++L +
Sbjct: 388 GFCKEKKMDRAIEYLERMVS-RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG-C 445
Query: 268 VKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVF 327
+ Y+ + L +AG+ A++ L + + P+ ++ LV L +E ++ E
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD-LKPDTITYSSLVGGLSREGKVDEAI 504
Query: 328 DLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSL 387
F + + I P+ VT N+++ CK+ D AI+ G PN Y LI L
Sbjct: 505 KFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Query: 388 CGDGSTHEAYEVLKNSIDHGLF 409
+G EA E+L + GL
Sbjct: 565 AYEGMAKEALELLNELCNKGLM 586
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 154 bits (388), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 134/545 (24%), Positives = 236/545 (43%), Gaps = 42/545 (7%)
Query: 116 VDFLENYKKDRYYHQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNA 175
VD + K R + + + L+ A K ++ + L +M+ G+ D Y Y + +N
Sbjct: 68 VDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINC 127
Query: 176 LVEQGCFD-AVAVVSKQISMRGFEND-VTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECV 233
+ A+AV++K + + G+E D VT + +L C K+I +AV Q+V
Sbjct: 128 FCRRSQLSLALAVLAKMMKL-GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 234 SGFMIGIVVDALCKNSRFEQAGKLLEDFKDR---DDVVKLEKAYDVWLRNLVRAGRLDLA 290
F ++ L +++ +A L++ R D+V Y + L + G +DLA
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV----TYGTVVNGLCKRGDIDLA 242
Query: 291 LEFLK--SKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTV 348
L LK K +E +V +N ++ L K + + +LF +M I PD T +++
Sbjct: 243 LSLLKKMEKGKIEA---DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Query: 349 LCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAY----EVLKNSI 404
+ C G A L E ++PN + ++ LI++ +G EA E++K SI
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 405 DHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVE 464
D +F T S L + C + ++ K + + ++ VTY I CKA +VE
Sbjct: 360 DPDIF----TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVE 415
Query: 465 VGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVI 524
G + E+S+ V + TY LIHGF ++ D A + +M G P + ++
Sbjct: 416 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 475
Query: 525 RCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLV 584
LC AK + +Q S E + YN I+G + + ++ + G+
Sbjct: 476 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVS 535
Query: 585 PQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECY 644
P + + YNT+I G C+ A +++M+ +G P+ Y
Sbjct: 536 PNVIA-------------------YNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTY 576
Query: 645 EELIK 649
LI+
Sbjct: 577 NTLIR 581
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 128/539 (23%), Positives = 204/539 (37%), Gaps = 51/539 (9%)
Query: 203 RTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFK 262
R I+ L K+D+AV+ F +V R S ++ A+ K ++FE L E +
Sbjct: 51 REILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQ 110
Query: 263 DRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLE--------------------- 301
L Y +++ R +L LAL L L
Sbjct: 111 TLGISHDL-YTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 302 -------------GYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTV 348
GY P+ F F L+ L N+ E L M + PD VT TV
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 349 LCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGL 408
+ CK G +D+A+ L K + + + ++YN +I+ LC +A + + G+
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
Query: 409 FPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYL 468
P T S L LC G++ L+ +ER I VT+ I A K K+
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 349
Query: 469 IHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLC 528
++ E+ + + TY LI+GF +R D A + M P + +I+ C
Sbjct: 350 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC 409
Query: 529 NMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQ-L 587
+ + M N Y I G + D A+ V++ M G+ P L
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 588 GSNILM--------------LQSYLKRKNGIPR-KLYNTLIVGLCKAMKANLAWGFMREM 632
NIL+ + YL+R P YN +I G+CKA K W +
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 633 RHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRD 691
G+ P++ Y +I C + + ++ ++ G S NTL+ L+ D
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 121/566 (21%), Positives = 223/566 (39%), Gaps = 45/566 (7%)
Query: 246 CKNSRFEQA-GKLLEDFKDR-DDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGY 303
C F A G E ++R D++K++ A +DL + +KS+
Sbjct: 38 CWERSFASASGDYREILRNRLSDIIKVDDA-------------VDLFGDMVKSRP----- 79
Query: 304 VPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIE 363
P + FN L+S + K N+ V L M+ IS D T + + FC+ + +A+
Sbjct: 80 FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139
Query: 364 LYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALC 423
+ + G P+ + + L+N C +A ++ ++ G P T + L L
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 424 RDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASEN 483
K + LV ++R + VTY ++ LCK +++ + ++ + A
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 259
Query: 484 TYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNM 543
Y +I G K D A L EM+ G +P + ++I CLCN + L +M
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319
Query: 544 QLSHQETNFQIYNFFIDGAGHVKRPDLARA--VYELMQRSGLVPQLGSNILMLQSYLKRK 601
N ++ ID VK L A +Y+ M + + P + +
Sbjct: 320 IERKINPNVVTFSALIDA--FVKEGKLVEAEKLYDEMIKRSIDPDIFT------------ 365
Query: 602 NGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVV 661
Y++LI G C + + A M +P++ Y LIK C K + +
Sbjct: 366 -------YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418
Query: 662 GVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGML-INEQSKISLLGQLIGVF 720
+ + G + TL+ + RD A + + M+ + I L+
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478
Query: 721 SGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRL-SVSEIDHACELFNRMRRKGYEPDQ 779
K+++ + + + D YTYNI++ + +++ ELF + KG P+
Sbjct: 479 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNV 538
Query: 780 WTFDILKCGLYNCLRTDEAERRLEEM 805
++ + G +EA+ L++M
Sbjct: 539 IAYNTMISGFCRKGSKEEADSLLKKM 564
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 155/360 (43%), Gaps = 42/360 (11%)
Query: 114 LMVDFLENYKKDRYYHQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLL 173
L + L+ +K + V +T++ G D AL+LF +M +G+ D + Y L+
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 174 NALVEQGCF-DAVAVVSKQISMRGFENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGREC 232
+ L G + DA ++S I + N VT + ++ K+ K+ EA + + +++
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360
Query: 233 VSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRD---DVVKLEKAYDVWLRNLVRAGRLDL 289
F +++ C + R ++A + E +D +VV Y ++ +A R++
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV----TYSTLIKGFCKAKRVEE 416
Query: 290 ALEFLK--SKNSLEGYV--------------------------------PEVFRFNFLVS 315
+E + S+ L G P + +N L+
Sbjct: 417 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 476
Query: 316 RLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSP 375
L K +L + +F ++ + PD T N ++ CKAG V+ EL+ + S G+SP
Sbjct: 477 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSP 536
Query: 376 NGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLV 435
N I YN +I+ C GS EA +LK + G P T + L A RDG E +L+
Sbjct: 537 NVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELI 596
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 174/429 (40%), Gaps = 47/429 (10%)
Query: 122 YKKDRYYHQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGC 181
YK D + TL+ G L K A+ L +M +G D Y ++N L ++G
Sbjct: 184 YKPDTFTFT-----TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 182 FDAVAVVSKQISMRGFENDVT-RTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGI 240
D + K++ E DV ++ LCK K +D+A+ F ++ + F
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 241 VVDALCKNSRFEQAGKLLEDFKDRD-------------------DVVKLEKAYDVWLRNL 281
++ LC R+ A +LL D +R +V+ EK YD ++
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 282 VRAG---------------RLDLA---LEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRL 323
+ RLD A E + SK+ P V ++ L+ K R+
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF----PNVVTYSTLIKGFCKAKRV 414
Query: 324 MEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYL 383
E +LF +M + + + VT T++ F +A D A ++K G+ PN + YN L
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 474
Query: 384 INSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNI 443
++ LC +G +A V + + P T +I+ + +C+ GK E +L + +
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV 534
Query: 444 KLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAAR 503
+ Y+ IS C+ E + ++ + + TY LI + + +A
Sbjct: 535 SPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAE 594
Query: 504 LLVEMEENG 512
L+ EM G
Sbjct: 595 LIKEMRSCG 603
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 142/304 (46%), Gaps = 20/304 (6%)
Query: 136 TLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFD-AVAVVSKQISM 194
L+ + GK A L+ +M + +D D + Y L+N D A + IS
Sbjct: 333 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 392
Query: 195 RGFENDVTRTIMLKCLCKQKKIDEAVEYFQQ-----LVSGRECVSGFMIGIVVDALCKNS 249
F N VT + ++K CK K+++E +E F++ LV + + G C N+
Sbjct: 393 DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 452
Query: 250 RFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLAL---EFLKSKNSLEGYVPE 306
+ K + +++ Y++ L L + G+L A+ E+L+ ++++E P+
Sbjct: 453 --QMVFKQMVSVGVHPNIL----TYNILLDGLCKNGKLAKAMVVFEYLQ-RSTME---PD 502
Query: 307 VFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYK 366
++ +N ++ + K ++ + ++LF ++ +SP+ + NT++ FC+ G + A L K
Sbjct: 503 IYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLK 562
Query: 367 SRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDG 426
E G PN YN LI + DG + E++K G T+ ++ + L DG
Sbjct: 563 KMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDG 621
Query: 427 KFEQ 430
+ ++
Sbjct: 622 RLDK 625
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/544 (24%), Positives = 233/544 (42%), Gaps = 40/544 (7%)
Query: 116 VDFLENYKKDRYYHQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNA 175
V+ + K R + + L+ A K D+ + L +M+ G+ + Y Y +L+N
Sbjct: 66 VNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINC 125
Query: 176 LVEQGCFD-AVAVVSKQISMRGFEND-VTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECV 233
+ A+AV++K + + G+E D VT +L C +I +AV Q+V
Sbjct: 126 FCRRSQLSLALAVLAKMMKL-GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 234 SGFMIGIVVDALCKNSRFEQAGKLLEDFKDR---DDVVKLEKAYDVWLRNLVRAGRLDLA 290
F ++ L +++R +A L++ + D+V Y + + L + G +DLA
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLV----TYGIVVNGLCKRGDIDLA 240
Query: 291 LEFLKSKNSLEGYV-PEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVL 349
L LK +G + P V +N ++ L + + +LF +M I P+ VT N+++
Sbjct: 241 LSLLKKME--QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 350 CFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAY----EVLKNSID 405
C G A L E ++PN + ++ LI++ +G EA E++K SID
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 406 HGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEV 465
+F T S L + C + ++ K + + ++ VTY+ I CKA +V+
Sbjct: 359 PDIF----TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 466 GYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIR 525
G + E+S+ V + TY LIHGF ++ D A + +M +G P + ++
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 526 CLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVP 585
LCN + +Q S E + YN I+G + + ++ + G+ P
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534
Query: 586 QLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYE 645
+ + Y T++ G C+ A REM+ G P Y
Sbjct: 535 NVVT-------------------YTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYN 575
Query: 646 ELIK 649
LI+
Sbjct: 576 TLIR 579
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 135/599 (22%), Positives = 233/599 (38%), Gaps = 31/599 (5%)
Query: 145 GKPDIALHLFGKMRFQGMDLDDYAY---HVLLNALVEQGCFDAVAVVSKQISMRGFENDV 201
GK A F F D Y + +N L + DAV + + R F + V
Sbjct: 23 GKCGTAPPSFSHCSFWVRDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIV 82
Query: 202 TRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDF 261
+ +L + K K D + +Q+ + + + I+++ C+ S+ A +L
Sbjct: 83 EFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKM 142
Query: 262 KD---RDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLL 318
D+V L L R+ A+ + + GY P+ F FN L+ L
Sbjct: 143 MKLGYEPDIVTLNS----LLNGFCHGNRISDAVSLVGQMVEM-GYQPDSFTFNTLIHGLF 197
Query: 319 KENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGI 378
+ NR E L M PD VT V+ CK G +D+A+ L K + + P +
Sbjct: 198 RHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVV 257
Query: 379 VYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFA 438
+YN +I++LC + ++A + + G+ P T + L LC G++ L+
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 439 LERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRA 498
+ER I VT+ I A K K+ ++ E+ + + TY LI+GF +R
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 499 DIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFF 558
D A + M P + +I+ C + + M N Y
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 559 IDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQS---------------YLKRKNG 603
I G + D A+ V++ M G++P + + ++L YL+R
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497
Query: 604 IPR-KLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVG 662
P YN +I G+CKA K W + G+ P++ Y ++ C +
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557
Query: 663 VMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGM----LINEQSKISLLGQLI 717
+ ++ G S NTL+ L+ D + +R M + + S I L+ ++
Sbjct: 558 LFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNML 616
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/505 (20%), Positives = 196/505 (38%), Gaps = 25/505 (4%)
Query: 305 PEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIEL 364
P + F+ L+S + K N+ V L M+ IS + T + ++ FC+ + +A+ +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 365 YKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCR 424
+ G P+ + N L+N C +A ++ ++ G P T + L L R
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 425 DGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENT 484
+ + LV + + + VTY ++ LCK +++ + ++ +
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 485 YIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQ 544
Y +I + A L EM+ G +P + ++IRCLCN + L +M
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 545 LSHQETNFQIYNFFIDGAGHVKRPDLARA--VYELMQRSGLVPQLGSNILMLQSYLKRKN 602
N ++ ID VK L A +Y+ M + + P + +
Sbjct: 319 ERKINPNVVTFSALIDA--FVKEGKLVEAEKLYDEMIKRSIDPDIFT------------- 363
Query: 603 GIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVG 662
Y++LI G C + + A M +P++ Y LIK C K D +
Sbjct: 364 ------YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 663 VMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQ-SKISLLGQLIGVFS 721
+ + G + TL+ + R+ A I + M+ + I L+
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477
Query: 722 GCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRL-SVSEIDHACELFNRMRRKGYEPDQW 780
KV + + + D YTYNI++ + +++ +LF + KG +P+
Sbjct: 478 NNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV 537
Query: 781 TFDILKCGLYNCLRTDEAERRLEEM 805
T+ + G +EA+ EM
Sbjct: 538 TYTTMMSGFCRKGLKEEADALFREM 562
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 84/190 (44%), Gaps = 4/190 (2%)
Query: 609 YNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLE 668
Y + + +K + A +M + +PS+ + +L+ + +D+V+ + ++
Sbjct: 49 YRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ 108
Query: 669 GHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGML-INEQSKISLLGQLIGVFSGCIKVS 727
G + + L+ + L A L M+ + + I L L+ F ++S
Sbjct: 109 NLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 168
Query: 728 QDIEGLQKMIEQCFPLDTYTYNILLRRL-SVSEIDHACELFNRMRRKGYEPDQWTFDILK 786
+ + +M+E + D++T+N L+ L + A L +RM KG +PD T+ I+
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 228
Query: 787 CGLYNCLRTD 796
GL C R D
Sbjct: 229 NGL--CKRGD 236
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 84/193 (43%), Gaps = 4/193 (2%)
Query: 136 TLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMR 195
TL+ G+ A + D A +F +M G+ D Y +LL+ L G + VV + +
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 196 GFENDV-TRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQA 254
E D+ T IM++ +CK K+++ + F L + ++ C+ E+A
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 555
Query: 255 GKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLV 314
L + K+ + Y+ +R +R G + E ++ S +V + LV
Sbjct: 556 DALFREMKEEGPLPD-SGTYNTLIRAHLRDGDKAASAELIREMRSCR-FVGDASTIG-LV 612
Query: 315 SRLLKENRLMEVF 327
+ +L + RL + F
Sbjct: 613 TNMLHDGRLDKSF 625
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/507 (23%), Positives = 225/507 (44%), Gaps = 30/507 (5%)
Query: 148 DIALHLFGKMRFQGMDLDDYAYHVLLNALVE--QGCFDAVAVVSKQISMRGFENDVTRTI 205
D+ L L +M +G+ + Y +++N + C A + + K I + N +T +
Sbjct: 105 DLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCL-AFSAMGKIIKLGYEPNTITFST 163
Query: 206 MLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLE---DFK 262
++ LC + ++ EA+E ++V I +V+ LC + + +A L++ ++
Sbjct: 164 LINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG 223
Query: 263 DRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENR 322
+ + V Y L + ++G+ LA+E L+ K + +++ ++ L K
Sbjct: 224 CQPNAV----TYGPVLNVMCKSGQTALAMELLR-KMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 323 LMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNY 382
L F+LF +M+ I+ + +T N ++ FC AG D +L + + ++PN + ++
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 383 LINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERN 442
LI+S +G EA E+ K I G+ P T + L D C++ ++ +V + +
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 443 IKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAA 502
T++ I+ CKAN+++ G + ++S VA TY LI GF + + ++A
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 503 RLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGA 562
L EM P ++ ++ LC+ K ++ S E + IYN I G
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518
Query: 563 GHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKA 622
+ + D A ++ + G+ P + K YN +I GLCK
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKPGV-------------------KTYNIMIGGLCKKGPL 559
Query: 623 NLAWGFMREMRHNGMYPSMECYEELIK 649
+ A R+M +G P Y LI+
Sbjct: 560 SEAELLFRKMEEDGHAPDGWTYNILIR 586
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 129/578 (22%), Positives = 238/578 (41%), Gaps = 33/578 (5%)
Query: 215 KIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRDDVVKLEKAY 274
K D+A++ F+ ++ R + + A+ K +++ L + + + L
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNL-YTL 126
Query: 275 DVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMK 334
+ + R +L LA + L GY P F+ L++ L E R+ E +L M
Sbjct: 127 SIMINCFCRCRKLCLAFSAMGKIIKL-GYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 335 EGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTH 394
E PD +T+NT++ C +G A+ L E+G PN + Y ++N +C G T
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 395 EAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFI 454
A E+L+ + + SI+ D LC+ G + +L + I +TY+ I
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 455 SALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHK 514
C A + + G + ++ + + T+ LI F K + A L EM G
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Query: 515 PTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQ-ETNFQIYNFFIDGAGHVKRPDLARA 573
P + ++I C E + Q++++ +S + N + +N I+G R D
Sbjct: 366 PDTITYTSLIDGFCK-ENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE 424
Query: 574 VYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMR 633
++ M G+V + YNTLI G C+ K N+A +EM
Sbjct: 425 LFRKMSLRGVVADTVT-------------------YNTLIQGFCELGKLNVAKELFQEMV 465
Query: 634 HNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLY 693
+ P++ Y+ L+ LC + + + +E ++ I N ++ +
Sbjct: 466 SRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 525
Query: 694 EAW-----IRLRGMLINEQSKISLLGQLIGVFSGCIKVSQDIEGLQKMIEQCFPLDTYTY 748
+AW + L+G+ + + +IG +S+ +KM E D +TY
Sbjct: 526 DAWDLFCSLPLKGV----KPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 581
Query: 749 NILLR-RLSVSEIDHACELFNRMRRKGYEPDQWTFDIL 785
NIL+R L + + +L ++R G+ D T ++
Sbjct: 582 NILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 619
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 171/395 (43%), Gaps = 9/395 (2%)
Query: 135 DTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISM 194
+TLV G L+GK A+ L KM G + Y +LN + + G + +++
Sbjct: 197 NTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 195 RGFENDVTR-TIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQ 253
R + D + +I++ LCK +D A F ++ + I++ C R++
Sbjct: 257 RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDD 316
Query: 254 AGKLLEDFKDR---DDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRF 310
KLL D R +VV + V + + V+ G+L A E K G P+ +
Sbjct: 317 GAKLLRDMIKRKINPNVV----TFSVLIDSFVKEGKLREAEELHKEMIH-RGIAPDTITY 371
Query: 311 NFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSE 370
L+ KEN L + + M P+ T N ++ +CKA +D +EL++ S
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSL 431
Query: 371 FGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQ 430
G+ + + YN LI C G + A E+ + + + P T IL D LC +G+ E+
Sbjct: 432 RGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK 491
Query: 431 MKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIH 490
++ + ++L Y+ I +C A+KV+ + + L TY +I
Sbjct: 492 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIG 551
Query: 491 GFNKSNRADIAARLLVEMEENGHKPTRALHRAVIR 525
G K A L +MEE+GH P + +IR
Sbjct: 552 GLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIR 586
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 183/452 (40%), Gaps = 11/452 (2%)
Query: 136 TLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGC-FDAVAVVSKQISM 194
TL+ G L G+ AL L +M G D + L+N L G +A+ ++ K +
Sbjct: 163 TLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY 222
Query: 195 RGFENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQA 254
N VT +L +CK + A+E +++ + I++D LCK+ + A
Sbjct: 223 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282
Query: 255 GKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKS--KNSLEGYVPEVFRFNF 312
L + + + + Y++ + AGR D + L+ K + P V F+
Sbjct: 283 FNLFNEMEMKGITTNI-ITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN---PNVVTFSV 338
Query: 313 LVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFG 372
L+ +KE +L E +L +M I+PD +T +++ FCK +D A ++ G
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 373 LSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMK 432
PN +N LIN C + E+ + G+ T + L C GK K
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 433 DLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGF 492
+L + R + VTY + LC + E I ++ + Y +IHG
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518
Query: 493 NKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNF 552
+++ D A L + G KP + +I LC ++ L M+ +
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 578
Query: 553 QIYNFFIDGAGHVKRPDLARAV--YELMQRSG 582
YN I H+ D ++V E ++R G
Sbjct: 579 WTYNILI--RAHLGDGDATKSVKLIEELKRCG 608
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 121/530 (22%), Positives = 215/530 (40%), Gaps = 62/530 (11%)
Query: 281 LVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISP 340
+ + + DL L K + L+G ++ + +++ + +L F + + P
Sbjct: 98 IAKTKQYDLVLALCK-QMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEP 156
Query: 341 DGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVL 400
+ +T +T++ C G V A+EL E G P+ I N L+N LC G EA ++
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 401 KNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKA 460
+++G P T + + +C+ G+ +L+ ERNIKL V Y I LCK
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKH 276
Query: 461 NKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALH 520
++ + + +E+ + TY LI GF + R D A+LL +M + P
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 336
Query: 521 RAVIRCLCNMETPAKQFLQLLNMQLSHQ--ETNFQIYNFFIDGAGHVKRPDLARAVYELM 578
+I ++ + + L+ ++ H+ + Y IDG D A + +LM
Sbjct: 337 SVLIDSF--VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 579 QRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMY 638
G P + + +N LI G CKA + + R+M G+
Sbjct: 395 VSKGCDPNI-------------------RTFNILINGYCKANRIDDGLELFRKMSLRGVV 435
Query: 639 PSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIR 698
Y LI+ C ++ + + R+V ++ I
Sbjct: 436 ADTVTYNTLIQGFCELGKLNVAKELFQEMVS--RKVPP--------------NIVTYKIL 479
Query: 699 LRGMLINEQSKISLLGQLIGVFSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRL-SV 757
L G+ N +S+ +L E +K+ + LD YNI++ + +
Sbjct: 480 LDGLCDNGESEKAL------------------EIFEKIEKSKMELDIGIYNIIIHGMCNA 521
Query: 758 SEIDHACELFNRMRRKGYEPDQWTFDILKCGLYNCLRTDEAE---RRLEE 804
S++D A +LF + KG +P T++I+ GL EAE R++EE
Sbjct: 522 SKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEE 571
Score = 110 bits (275), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 178/406 (43%), Gaps = 16/406 (3%)
Query: 144 AGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRGFE-NDVT 202
+G+ +A+ L KM + + LD Y ++++ L + G D + ++ M+G N +T
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIIT 300
Query: 203 RTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFK 262
I++ C + D+ + + ++ + + +++D+ K + +A +L ++
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI 360
Query: 263 DRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENR 322
R + Y + + LD A + + S +G P + FN L++ K NR
Sbjct: 361 HRG-IAPDTITYTSLIDGFCKENHLDKANQMVDLMVS-KGCDPNIRTFNILINGYCKANR 418
Query: 323 LMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNY 382
+ + +LF M + D VT NT++ FC+ G ++VA EL++ + PN + Y
Sbjct: 419 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 478
Query: 383 LINSLCGDGSTHEAYEVL------KNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVI 436
L++ LC +G + +A E+ K +D G++ +I+ +C K + DL
Sbjct: 479 LLDGLCDNGESEKALEIFEKIEKSKMELDIGIY------NIIIHGMCNASKVDDAWDLFC 532
Query: 437 FALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSN 496
+ +K TY+ I LCK + L+ ++ TY LI
Sbjct: 533 SLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDG 592
Query: 497 RADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLN 542
A + +L+ E++ G + + VI L + K FL +L+
Sbjct: 593 DATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRL-KKSFLDMLS 637
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 132/296 (44%), Gaps = 39/296 (13%)
Query: 136 TLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMR 195
+L+ G+ D A + M +G D + +++L+N + D + +++S+R
Sbjct: 373 SLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR 432
Query: 196 GFEND-VTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQA 254
G D VT +++ C+ K++ A E FQ++VS + + I++D LC N E+A
Sbjct: 433 GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKA 492
Query: 255 GKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLV 314
++ E K+EK+ LD+ + +N ++
Sbjct: 493 LEIFE---------KIEKS----------KMELDIGI------------------YNIII 515
Query: 315 SRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLS 374
+ +++ + +DLF + + P T N ++ CK G + A L++ E G +
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA 575
Query: 375 PNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQ 430
P+G YN LI + GDG ++ ++++ G T+ ++ D L DG+ ++
Sbjct: 576 PDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML-SDGRLKK 630
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 4/208 (1%)
Query: 603 GIPRKLY--NTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMV 660
GI LY + +I C+ K LA+ M ++ G P+ + LI LC
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 177
Query: 661 VGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGML-INEQSKISLLGQLIGV 719
+ +++ + G + NTL+ + EA + + M+ Q G ++ V
Sbjct: 178 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 237
Query: 720 FSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRLSV-SEIDHACELFNRMRRKGYEPD 778
+ + +E L+KM E+ LD Y+I++ L +D+A LFN M KG +
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297
Query: 779 QWTFDILKCGLYNCLRTDEAERRLEEMF 806
T++IL G N R D+ + L +M
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDMI 325
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 76/184 (41%), Gaps = 37/184 (20%)
Query: 620 MKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIG 679
+KA+ A R+M H+ P++ + L + TK YD+V+ + +E G
Sbjct: 67 IKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKG-------- 118
Query: 680 NTLLLHALKTRDLYEAWIRLRGMLINEQSKISLLGQLIGVFSGCIKVSQDIEGLQKMIEQ 739
+ H L T L +I F C K+ + K+I+
Sbjct: 119 ---IAHNLYT-----------------------LSIMINCFCRCRKLCLAFSAMGKIIKL 152
Query: 740 CFPLDTYTYNILLRRLSV-SEIDHACELFNRMRRKGYEPDQWTFDILKCGLYNCLRTDEA 798
+ +T T++ L+ L + + A EL +RM G++PD T + L GL CL EA
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGL--CLSGKEA 210
Query: 799 ERRL 802
E L
Sbjct: 211 EAML 214
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 87/216 (40%), Gaps = 38/216 (17%)
Query: 135 DTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISM 194
+TL+ G+ GK ++A LF +M + + + Y +LL+ L + G + + ++I
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Query: 195 RGFENDV-TRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQ 253
E D+ I++ +C K+D+A + F L + G G+
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP-----LKGVKPGV------------- 543
Query: 254 AGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFL 313
K Y++ + L + G L A E L K +G+ P+ + +N L
Sbjct: 544 ------------------KTYNIMIGGLCKKGPLSEA-ELLFRKMEEDGHAPDGWTYNIL 584
Query: 314 VSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVL 349
+ L + + L ++K S D T+ V+
Sbjct: 585 IRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 63/327 (19%), Positives = 123/327 (37%), Gaps = 29/327 (8%)
Query: 485 YIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQ 544
+ +L K+ + D+ L +ME G +I C C F + +
Sbjct: 91 FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII 150
Query: 545 LSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGI 604
E N ++ I+G R A + + M G P L +
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLIT--------------- 195
Query: 605 PRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVM 664
NTL+ GLC + K A + +M G P+ Y ++ ++C + + + ++
Sbjct: 196 ----INTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 665 NHLEGHGRQVTSFIGNTLLLHALKTRDLYEAW-----IRLRGMLINEQSKISLLGQLIGV 719
+E ++ + + ++ K L A+ + ++G+ N I LIG
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN----IITYNILIGG 307
Query: 720 FSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRR-LSVSEIDHACELFNRMRRKGYEPD 778
F + + L+ MI++ + T+++L+ + ++ A EL M +G PD
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 779 QWTFDILKCGLYNCLRTDEAERRLEEM 805
T+ L G D+A + ++ M
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLM 394
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 180/392 (45%), Gaps = 3/392 (0%)
Query: 135 DTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISM 194
+TL+ G L GK A+ L +M G D Y+ ++N + G + +++
Sbjct: 162 NTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEE 221
Query: 195 RGFENDV-TRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQ 253
R + DV T + ++ LC+ ID A+ F+++ + S +V LCK ++
Sbjct: 222 RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWND 281
Query: 254 AGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFL 313
LL+D R+ +V ++V L V+ G+L A E K + G P + +N L
Sbjct: 282 GALLLKDMVSRE-IVPNVITFNVLLDVFVKEGKLQEANELYKEMIT-RGISPNIITYNTL 339
Query: 314 VSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGL 373
+ +NRL E ++ M + SPD VT +++ +C VD ++++++ S+ GL
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399
Query: 374 SPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKD 433
N + Y+ L+ C G A E+ + + HG+ P T IL D LC +GK E+ +
Sbjct: 400 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE 459
Query: 434 LVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFN 493
+ + + L V Y I +CK KVE + + L + TY +I G
Sbjct: 460 IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519
Query: 494 KSNRADIAARLLVEMEENGHKPTRALHRAVIR 525
K A LL +MEE+G+ P + +IR
Sbjct: 520 KKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/516 (20%), Positives = 218/516 (42%), Gaps = 33/516 (6%)
Query: 183 DAVAVVSKQISMRGFENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVV 242
DA+A+ + I R + V + + + K+ + +++ +QL + + + I++
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 243 DALCKNSR----FEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKN 298
+ C+ + + GK+++ + D ++ ++ L G++ A+ L +
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTT-----TFNTLIKGLFLEGKVSEAV-VLVDRM 184
Query: 299 SLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMV 358
G P+V +N +V+ + + DL M+E + D T +T++ C+ G +
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 359 DVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSIL 418
D AI L+K G+ + + YN L+ LC G ++ +LK+ + + P T ++L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 419 ADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNK 478
D ++GK ++ +L + R I +TY+ + C N++ + + R NK
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR-NK 363
Query: 479 VASE-NTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQF 537
+ + T+ LI G+ R D ++ + + G + +++ C K
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ-SGKIKLA 422
Query: 538 LQLLNMQLSHQE-TNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQS 596
+L +SH + Y +DG + + A ++E +Q+S + LG I+M
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM--DLG--IVM--- 475
Query: 597 YLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKN 656
Y T+I G+CK K AW + G+ P++ Y +I LC +
Sbjct: 476 ------------YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 523
Query: 657 YDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDL 692
++ +E G NTL+ L+ DL
Sbjct: 524 LSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 120/522 (22%), Positives = 213/522 (40%), Gaps = 56/522 (10%)
Query: 146 KPDIALHLFGKM-RFQGM-DLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRGFENDV-T 202
K D A+ LF +M R + + L D++ +A+ F+ V KQ+ + G +++ T
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSR--FFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125
Query: 203 RTIMLKCLCKQKKI---------------DEAVEYFQQLVSGRECVSGFMIGIVVDALCK 247
IM+ C C+ K + F L+ G F+ G V +A+
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGL-----FLEGKVSEAVVL 180
Query: 248 NSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEV 307
R + G + DVV Y+ + + R+G LAL+ L+ K +V
Sbjct: 181 VDRMVENGC-------QPDVV----TYNSIVNGICRSGDTSLALDLLR-KMEERNVKADV 228
Query: 308 FRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKS 367
F ++ ++ L ++ + LF +M+ I VT N+++ CKAG + L K
Sbjct: 229 FTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKD 288
Query: 368 RSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGK 427
+ PN I +N L++ +G EA E+ K I G+ P T + L D C +
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR 348
Query: 428 FEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQ 487
+ +++ + VT+ I C +V+ G + +S+ VA+ TY
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 488 LIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSH 547
L+ GF +S + +A L EM +G P + ++ LC+ K ++Q S
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468
Query: 548 QETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRK 607
+ +Y I+G + + A ++ + G+ P + +
Sbjct: 469 MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT------------------ 510
Query: 608 LYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIK 649
Y +I GLCK + A +R+M +G P+ Y LI+
Sbjct: 511 -YTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/510 (22%), Positives = 210/510 (41%), Gaps = 28/510 (5%)
Query: 281 LVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISP 340
+ R + +L L+F K + L G ++ N +++ + + + + + + P
Sbjct: 98 IARTKQFNLVLDFCK-QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP 156
Query: 341 DGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVL 400
D T NT++ G V A+ L E G P+ + YN ++N +C G T A ++L
Sbjct: 157 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLL 216
Query: 401 KNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKA 460
+ + + T S + D+LCRDG + L + IK VTY+ + LCKA
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276
Query: 461 NKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALH 520
K G L+ ++ V + T+ L+ F K + A L EM G P +
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 336
Query: 521 RAVIR--CLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELM 578
++ C+ N + A L L M + + + I G VKR D V+ +
Sbjct: 337 NTLMDGYCMQNRLSEANNMLDL--MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 579 QRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMY 638
+ GLV N + Y+ L+ G C++ K LA +EM +G+
Sbjct: 395 SKRGLVA----------------NAVT---YSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Query: 639 PSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIR 698
P + Y L+ LC + + + L+ + + T++ K + +AW
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW-N 494
Query: 699 LRGMLINEQSKISLLGQLIGVFSGCIK--VSQDIEGLQKMIEQCFPLDTYTYNILLR-RL 755
L L + K +++ + + C K +S+ L+KM E + TYN L+R L
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554
Query: 756 SVSEIDHACELFNRMRRKGYEPDQWTFDIL 785
++ + +L M+ G+ D + ++
Sbjct: 555 RDGDLTASAKLIEEMKSCGFSADASSIKMV 584
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 142/359 (39%), Gaps = 21/359 (5%)
Query: 449 TYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEM 508
T + I+ C+ K Y + ++ ++ T+ LI G + A L+ M
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 509 EENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRP 568
ENG +P + +++ +C + L M+ + + + Y+ ID
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 569 DLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGF 628
D A ++++ M+ G+ + + YN+L+ GLCKA K N
Sbjct: 245 DAAISLFKEMETKGIKSSVVT-------------------YNSLVRGLCKAGKWNDGALL 285
Query: 629 MREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALK 688
+++M + P++ + L+ + + + G NTL+
Sbjct: 286 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM 345
Query: 689 TRDLYEAWIRLRGMLINEQSK-ISLLGQLIGVFSGCIKVSQDIEGLQKMIEQCFPLDTYT 747
L EA L M+ N+ S I LI + +V ++ + + ++ + T
Sbjct: 346 QNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVT 405
Query: 748 YNILLRRLSVS-EIDHACELFNRMRRKGYEPDQWTFDILKCGLYNCLRTDEAERRLEEM 805
Y+IL++ S +I A ELF M G PD T+ IL GL + + ++A E++
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 146 bits (368), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 152/645 (23%), Positives = 258/645 (40%), Gaps = 74/645 (11%)
Query: 137 LVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRG 196
LV GY AG D L L M G+ + Y+ ++++ +G D + +++ G
Sbjct: 188 LVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEG 247
Query: 197 FEND-VTRTIMLKCLCKQKKIDEAVEYFQQL----VSGRECVSGFMIGIVVDALCKNSRF 251
D VT + LCK+ K+ +A F + G + +++ CK
Sbjct: 248 LVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLL 307
Query: 252 EQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFN 311
E A L E ++ DD+ L+ +Y++WL+ LVR G+ A LK +G P ++ +N
Sbjct: 308 EDAKTLFESIRENDDLASLQ-SYNIWLQGLVRHGKFIEAETVLKQMTD-KGIGPSIYSYN 365
Query: 312 FLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEF 371
L+ L K L + + MK + PD VT +L +C G VD A L +
Sbjct: 366 ILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRN 425
Query: 372 GLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQM 431
PN N L++SL G EA E+L+ + G T +I+ D LC G+ ++
Sbjct: 426 NCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKA 485
Query: 432 KDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHG 491
++V + +++ +AL +G L+ L N + TY L++G
Sbjct: 486 IEIV-----KGMRVHGS------AALGNLGNSYIG-LVDDSLIENNCLPDLITYSTLLNG 533
Query: 492 FNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETN 551
K+ R A L EM +P + I C + F L +M+ +
Sbjct: 534 LCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKS 593
Query: 552 FQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNT 611
+ YN I G G + + + M+ G+ P + + YNT
Sbjct: 594 LETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICT-------------------YNT 634
Query: 612 LIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHG 671
I LC+ K A + EM + P++ ++ LI+ C ++DM V
Sbjct: 635 AIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF------- 687
Query: 672 RQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQSKISLLGQLIGVFSGCIKVSQDIE 731
S G L++L +L A GQL+ + E
Sbjct: 688 ETAVSICGQKEGLYSLMFNELLAA------------------GQLL----------KATE 719
Query: 732 GLQKMIEQCFPLDTYTYNILLRRL-SVSEIDHACELFNRMRRKGY 775
L+ ++++ F L T+ Y L+ L E++ A + ++M +GY
Sbjct: 720 LLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGY 764
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 116/491 (23%), Positives = 192/491 (39%), Gaps = 45/491 (9%)
Query: 305 PEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIEL 364
P V+ +N L+ +KE R+ V L+ DM I+P T N ++ C + VD A EL
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 365 YKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCR 424
+ E G PN + L+ C G T + E+L G+ P K + + + CR
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 425 DGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSE--------LSRM 476
+G+ + + +V E + VT++ ISALCK KV I S+ L R
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 477 NKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQ 536
N + TY ++ GF K + A L + EN + + ++ L +
Sbjct: 290 NSI----TYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEA 345
Query: 537 FLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQS 596
L M + YN +DG + A+ + LM+R+G+ P +
Sbjct: 346 ETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVT------- 398
Query: 597 YLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKN 656
Y L+ G C K + A ++EM N P+ L+ L
Sbjct: 399 ------------YGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGR 446
Query: 657 YDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQSKISLLGQL 716
++ + G + + N ++ + +L +A ++GM ++ + LG L
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAA---LGNL 503
Query: 717 IGVFSGCIKVSQDIEGLQKMIE-QCFPLDTYTYNILLRRL-SVSEIDHACELFNRMRRKG 774
+ G + S +IE C P D TY+ LL L A LF M +
Sbjct: 504 GNSYIGLVDDS--------LIENNCLP-DLITYSTLLNGLCKAGRFAEAKNLFAEMMGEK 554
Query: 775 YEPDQWTFDIL 785
+PD ++I
Sbjct: 555 LQPDSVAYNIF 565
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 153/379 (40%), Gaps = 41/379 (10%)
Query: 116 VDFLENYKKDRYYHQVRFNDTL---------VMGYALAGKPDIALHLFGKMRFQGMDLDD 166
V LE+ K + +R ND L + G GK A + +M +G+
Sbjct: 304 VGLLEDAKT--LFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSI 361
Query: 167 YAYHVLLNALVEQGCFDAVAVVSKQISMRGFEND-VTRTIMLKCLCKQKKIDEAVEYFQQ 225
Y+Y++L++ L + G + + G D VT +L C K+D A Q+
Sbjct: 362 YSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQE 421
Query: 226 LVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRD---DVVKLEKAYDVWLRNLV 282
++ + + I++ +L K R +A +LL ++ D V ++ + L
Sbjct: 422 MMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTC----NIIVDGLC 477
Query: 283 RAGRLDLALEFLKS------------KNSLEGYV----------PEVFRFNFLVSRLLKE 320
+G LD A+E +K NS G V P++ ++ L++ L K
Sbjct: 478 GSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKA 537
Query: 321 NRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVY 380
R E +LF +M ++ PD V N + FCK G + A + K + G + Y
Sbjct: 538 GRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETY 597
Query: 381 NYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALE 440
N LI L E + ++ + G+ P T + LC K E +L+ ++
Sbjct: 598 NSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQ 657
Query: 441 RNIKLRDVTYDKFISALCK 459
+NI ++ I A CK
Sbjct: 658 KNIAPNVFSFKYLIEAFCK 676
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 103/463 (22%), Positives = 181/463 (39%), Gaps = 68/463 (14%)
Query: 347 TVLCFFCKAGMVDVAIELYK-SRSEFGLS-PNGIVYNYLINSLCGDGSTHEAYEVLKNSI 404
+V+ F K+ +D A ++ RS F + P+ +YN L+ S + + K+ +
Sbjct: 80 SVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMV 139
Query: 405 DHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVE 464
G+ P T ++L ALC + ++L E+ K + T+ + CKA +
Sbjct: 140 LCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTD 199
Query: 465 VGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVI 524
G + + + + ++ Y ++ F + R D + +++ +M E G P + I
Sbjct: 200 KGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRI 259
Query: 525 RCLCN---METPAKQFLQL-LNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQR 580
LC + ++ F + L+ L N YN + G V + A+ ++E ++
Sbjct: 260 SALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRE 319
Query: 581 SGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPS 640
+ ++ LQSY N + GL + K A +++M G+ PS
Sbjct: 320 N-------DDLASLQSY------------NIWLQGLVRHGKFIEAETVLKQMTDKGIGPS 360
Query: 641 MECYEELIKLLCST---KNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWI 697
+ Y L+ LC + +VG+M N + A+
Sbjct: 361 IYSYNILMDGLCKLGMLSDAKTIVGLMKR-------------NGVCPDAVT--------- 398
Query: 698 RLRGMLINEQSKISLLGQLIGVFSGCIKVSQDIEGLQKMI-EQCFPLDTYTYNILLRRL- 755
G L+ + KV LQ+M+ C P + YT NILL L
Sbjct: 399 ---------------YGCLLHGYCSVGKVDAAKSLLQEMMRNNCLP-NAYTCNILLHSLW 442
Query: 756 SVSEIDHACELFNRMRRKGYEPDQWTFDILKCGLYNCLRTDEA 798
+ I A EL +M KGY D T +I+ GL D+A
Sbjct: 443 KMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKA 485
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 147/397 (37%), Gaps = 102/397 (25%)
Query: 137 LVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRG 196
L+ GY GK D A L +M + Y ++LL++L + G + ++++ +G
Sbjct: 402 LLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG 461
Query: 197 FEND-VTRTIMLKCLCKQKKIDEAVEYFQQL-VSGRECVSGF---MIGIVVDAL------ 245
+ D VT I++ LC ++D+A+E + + V G + IG+V D+L
Sbjct: 462 YGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCL 521
Query: 246 -------------CKNSRFEQAGKLLEDF---KDRDDVVKLEKAYDVWLRNLVRAGRLDL 289
CK RF +A L + K + D V AY++++ + + G++
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSV----AYNIFIHHFCKQGKISS 577
Query: 290 ALEFLK------------SKNSL----------------------EGYVPEVFRFNFLVS 315
A LK + NSL +G P + +N +
Sbjct: 578 AFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQ 637
Query: 316 RLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCK--------------------- 354
L + ++ + +L +M + I+P+ + ++ FCK
Sbjct: 638 YLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQK 697
Query: 355 -------------AGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLK 401
AG + A EL ++ + G +Y L+ SLC A +L
Sbjct: 698 EGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILH 757
Query: 402 NSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFA 438
ID G L + D L GK K+ FA
Sbjct: 758 KMIDRGYGFDPAALMPVIDGL---GKMGNKKEANSFA 791
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 128/364 (35%), Gaps = 62/364 (17%)
Query: 450 YDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEME 509
Y+ + + K +VE ++ ++ T+ LI S+ D A L EM
Sbjct: 115 YNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMP 174
Query: 510 ENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPD 569
E G KP ++R C K L+LLN
Sbjct: 175 EKGCKPNEFTFGILVRGYCKAGLTDKG-LELLNA-------------------------- 207
Query: 570 LARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFM 629
M+ G++P + +YNT++ C+ + + + +
Sbjct: 208 --------MESFGVLPN-------------------KVIYNTIVSSFCREGRNDDSEKMV 240
Query: 630 REMRHNGMYPSMECYEELIKLLCSTK---NYDMVVGVMNHLEGHGRQVTSFIGNTLLLHA 686
+MR G+ P + + I LC + + M E G + I L+L
Sbjct: 241 EKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKG 300
Query: 687 LKTRDLYEAWIRLRGMLINEQSKISLLGQLIGVFSGCIKVSQDIEG---LQKMIEQCFPL 743
L E L I E ++ L G ++ + IE L++M ++
Sbjct: 301 FCKVGLLEDAKTLFES-IRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGP 359
Query: 744 DTYTYNILLRRL-SVSEIDHACELFNRMRRKGYEPDQWTFDILKCGLYNCLRTDEAERRL 802
Y+YNIL+ L + + A + M+R G PD T+ L G + + D A+ L
Sbjct: 360 SIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLL 419
Query: 803 EEMF 806
+EM
Sbjct: 420 QEMM 423
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 133/544 (24%), Positives = 232/544 (42%), Gaps = 43/544 (7%)
Query: 116 VDFLENYKKDRYYHQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNA 175
VD + K R + + + L+ A K ++ + L +M+ G+ D Y Y + +N
Sbjct: 68 VDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINC 127
Query: 176 LVEQGCFD-AVAVVSKQISMRGFEND-VTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECV 233
+ A+AV++K + + G+E D VT + +L C K+I +AV Q+V
Sbjct: 128 FCRRSQLSLALAVLAKMMKL-GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 234 SGFMIGIVVDALCKNSRFEQAGKLLEDFKDR---DDVVKLEKAYDVWLRNLVRAGRLDLA 290
F ++ L +++ +A L++ R D+V Y + L + G +DLA
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV----TYGTVVNGLCKRGDIDLA 242
Query: 291 LEFLKSKNSLEG--YVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTV 348
L L N +E V FN ++ L K + DLF +M+ I P+ VT N++
Sbjct: 243 LNLL---NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 349 LCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGL 408
+ C G A L + E ++PN + +N LI++ +G EA ++ + I +
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Query: 409 FPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYL 468
P T ++L + C + ++ K + F + ++ TY+ I+ CK +VE G
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 469 IHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLC 528
+ E+S+ V + TY +I GF ++ D A + +M N + ++ LC
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLC 479
Query: 529 NMETPAKQFLQLLNMQLSHQETNFQIYNFFIDG---AGHVKRPDLARAVYELMQRSGLVP 585
+ + +Q S E N IYN I+G AG V ++L + P
Sbjct: 480 SYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGE------AWDLFCSLSIKP 533
Query: 586 QLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYE 645
+ + YNT+I GLC A R+M+ +G P+ Y
Sbjct: 534 DVVT-------------------YNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYN 574
Query: 646 ELIK 649
LI+
Sbjct: 575 TLIR 578
Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 148/656 (22%), Positives = 257/656 (39%), Gaps = 111/656 (16%)
Query: 146 KPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRGFENDV-TRT 204
K D A+ LFG M ++ LL+A+ + F+ V + +Q+ G +D+ T +
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 205 IMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDR 264
I + C C++ ++ A+ +++ + +++ C + R A L+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV------ 176
Query: 265 DDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLM 324
D +V++ GY P+ F F L+ L N+
Sbjct: 177 DQMVEM-------------------------------GYKPDTFTFTTLIHGLFLHNKAS 205
Query: 325 EVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLI 384
E L M + PD VT TV+ CK G +D+A+ L + N +++N +I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 385 NSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIK 444
+SLC A ++ G+ P T + L + LC G++ L+ LE+ I
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325
Query: 445 LRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARL 504
VT++ I A K K+ +H E+ + + TY LI+GF NR D A ++
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385
Query: 505 LVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGH 564
M P N Q YN I+G
Sbjct: 386 FKFMVSKDCLP-----------------------------------NIQTYNTLINGFCK 410
Query: 565 VKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANL 624
KR + ++ M + GLV G+ + Y T+I G +A +
Sbjct: 411 CKRVEDGVELFREMSQRGLV---GNTV----------------TYTTIIQGFFQAGDCDS 451
Query: 625 AWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLL 684
A ++M N + + Y L+ LCS D + + +L+ ++ FI NT++
Sbjct: 452 AQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIE 511
Query: 685 HALKTRDLYEAW-----IRLRGMLINEQSKISLLGQLIGVFSGCIK-VSQDIEGL-QKMI 737
K + EAW + ++ ++ + IS L C K + Q+ + L +KM
Sbjct: 512 GMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGL---------CSKRLLQEADDLFRKMK 562
Query: 738 EQCFPLDTYTYNILLRRLSVSEIDHA--CELFNRMRRKGYEPDQWTFDILKCGLYN 791
E ++ TYN L+R ++ + D A EL MR G+ D T ++ L++
Sbjct: 563 EDGTLPNSGTYNTLIRA-NLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHD 617
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 129/328 (39%), Gaps = 35/328 (10%)
Query: 487 QLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLS 546
+L+ K N+ ++ L +M+ G + I C C + L M
Sbjct: 88 KLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL 147
Query: 547 HQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPR 606
E + + ++G H KR A A+ + M G P +
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFT----------------- 190
Query: 607 KLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNH 666
+ TLI GL KA+ A + +M G P + Y ++ LC + D+ + ++N
Sbjct: 191 --FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNK 248
Query: 667 LEGHGRQVTSFIGNTLLLHALKTR------DLYEAWIRLRGMLINEQSKISLLGQLI--G 718
+E + I NT++ K R DL+ + +G+ N + SL+ L G
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTE-METKGIRPNVVTYNSLINCLCNYG 307
Query: 719 VFSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRL-SVSEIDHACELFNRMRRKGYEP 777
+S ++ L M+E+ + T+N L+ ++ A +L M ++ +P
Sbjct: 308 RWSDASRL------LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 778 DQWTFDILKCGLYNCLRTDEAERRLEEM 805
D T+++L G R DEA++ + M
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFM 389
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 168/730 (23%), Positives = 292/730 (40%), Gaps = 70/730 (9%)
Query: 65 QVLNYGKKTKDVLSCLKFFDWAGRQPHFHHTRATFHAIFKLLHCAKLTPLMVDFLENYKK 124
VL K K+ + FD A R P + H+ +H I + L ++ + +E +
Sbjct: 12 HVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRS 71
Query: 125 DRYYHQVRFNDTLVMGYALAGKPDIALHLFGKMR-FQGMDLDDYAYHVLLNALVEQGCFD 183
+++ Y PD AL +F +MR G + +Y+ LLNA VE +
Sbjct: 72 QECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWV 131
Query: 184 AVAVVSKQISMRGFENDV-TRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVV 242
V + G ++ T +++K CK+K+ ++A GF+
Sbjct: 132 KVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA--------------RGFL----- 172
Query: 243 DALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEG 302
D + K E FK DV +Y + +L +AG+LD ALE + S G
Sbjct: 173 DWMWK-----------EGFK--PDVF----SYSTVINDLAKAGKLDDALELF-DEMSERG 214
Query: 303 YVPEVFRFNFLVSRLLKE---NRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVD 359
P+V +N L+ LKE ME++D ++ + + P+ T N ++ K G VD
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLE--DSSVYPNVKTHNIMISGLSKCGRVD 272
Query: 360 VAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILA 419
+++++ + + Y+ LI+ LC G+ +A V + T + +
Sbjct: 273 DCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTML 332
Query: 420 DALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKV 479
CR GK ++ +L +N + V+Y+ I L + K++ +I +
Sbjct: 333 GGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYA 391
Query: 480 ASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQ 539
A + TY IHG + + A ++ E+E +G + ++I CLC + +
Sbjct: 392 ADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNL 451
Query: 540 LLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLK 599
+ M E N + N I G R A M ++G P + S
Sbjct: 452 VKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVS---------- 501
Query: 600 RKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDM 659
YN LI GLCKA K A F++EM NG P ++ Y L+ LC + D+
Sbjct: 502 ---------YNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDL 552
Query: 660 VVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQSKISLLGQLIGV 719
+ + + G + + N L+ L +A + M ++ + L +
Sbjct: 553 ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANM--EHRNCTANLVTYNTL 610
Query: 720 FSGCIKVSQDIEG---LQKMIEQCFPLDTYTYNILLRRLSVSE-IDHACELFNRMRRKGY 775
G KV M + D +YN +++ L + + +A E F+ R G
Sbjct: 611 MEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGI 670
Query: 776 EPDQWTFDIL 785
P +T++IL
Sbjct: 671 FPTVYTWNIL 680
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 124/588 (21%), Positives = 240/588 (40%), Gaps = 40/588 (6%)
Query: 70 GKKTKDVLSCLKFFDWAGRQPHFHHTRATFHAIFKLLHCAKLTPLMVDFLENYKKDRYYH 129
K+ V S +F+ AG P+ T++ + K+ K FL+ K+ +
Sbjct: 127 AKQWVKVESLFAYFETAGVAPNLQ----TYNVLIKMSCKKKEFEKARGFLDWMWKEGFKP 182
Query: 130 QVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVS 189
V T++ A AGK D AL LF +M +G+ D Y++L++ +++ +
Sbjct: 183 DVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELW 242
Query: 190 KQI--SMRGFENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCK 247
++ + N T IM+ L K ++D+ ++ ++++ + ++ LC
Sbjct: 243 DRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCD 302
Query: 248 NSRFEQAGKLLEDFKDRD---DVVKLEKAYDVWLRNLVRAGRLDLALEF---LKSKNSLE 301
++A + + +R DVV Y+ L R G++ +LE ++ KNS+
Sbjct: 303 AGNVDKAESVFNELDERKASIDVV----TYNTMLGGFCRCGKIKESLELWRIMEHKNSVN 358
Query: 302 GYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVA 361
+ +N L+ LL+ ++ E ++ M + D T + C G V+ A
Sbjct: 359 -----IVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKA 413
Query: 362 IELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADA 421
+ + + G + Y +I+ LC EA ++K HG+ + L
Sbjct: 414 LGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGG 473
Query: 422 LCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVAS 481
L RD + + + + + V+Y+ I LCKA K E+
Sbjct: 474 LIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPD 533
Query: 482 ENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLL 541
TY L+ G + + D+A L + ++G + +H +I LC++ +
Sbjct: 534 LKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMA 593
Query: 542 NMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRK 601
NM+ + N YN ++G V + A ++ M + GL P + S
Sbjct: 594 NMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIIS------------ 641
Query: 602 NGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIK 649
YNT++ GLC + A F + R++G++P++ + L++
Sbjct: 642 -------YNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVR 682
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 121/521 (23%), Positives = 210/521 (40%), Gaps = 23/521 (4%)
Query: 288 DLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNT 347
D AL+ K + G P + +N L++ ++ + ++V LF + ++P+ T N
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154
Query: 348 VLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHG 407
++ CK + A + G P+ Y+ +IN L G +A E+ + G
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214
Query: 408 LFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDV-TYDKFISALCKANKVEVG 466
+ P +IL D ++ + +L LE + +V T++ IS L K +V+
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDC 274
Query: 467 YLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRC 526
I + + + TY LIHG + D A + E++E + ++
Sbjct: 275 LKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGG 334
Query: 527 LCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQ 586
C K+ L+L + N YN I G + D A ++ LM G
Sbjct: 335 FCRC-GKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAAD 393
Query: 587 LGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEE 646
+ Y I GLC N A G M+E+ +G + + Y
Sbjct: 394 -------------------KTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYAS 434
Query: 647 LIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINE 706
+I LC K + ++ + HG ++ S + N L+ ++ L EA LR M N
Sbjct: 435 IIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNG 494
Query: 707 -QSKISLLGQLIGVFSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRLSVS-EIDHAC 764
+ + LI K + +++M+E + D TY+ILL L +ID A
Sbjct: 495 CRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLAL 554
Query: 765 ELFNRMRRKGYEPDQWTFDILKCGLYNCLRTDEAERRLEEM 805
EL+++ + G E D +IL GL + + D+A + M
Sbjct: 555 ELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANM 595
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 152/396 (38%), Gaps = 39/396 (9%)
Query: 135 DTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISM 194
+T++ G+ GK +L L+ M + ++ +Y++L+ L+E G D ++ + +
Sbjct: 329 NTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPA 387
Query: 195 RGFEND-VTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQ 253
+G+ D T I + LC +++A+ Q++ S + + ++D LCK R E+
Sbjct: 388 KGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEE 447
Query: 254 AGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFL 313
A L++ E K L +V N L
Sbjct: 448 ASNLVK--------------------------------EMSKHGVELNSHV-----CNAL 470
Query: 314 VSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGL 373
+ L++++RL E +M + P V+ N ++C CKAG A K E G
Sbjct: 471 IGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGW 530
Query: 374 SPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKD 433
P+ Y+ L+ LC D A E+ + GL +IL LC GK +
Sbjct: 531 KPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMT 590
Query: 434 LVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFN 493
++ RN VTY+ + K +I + +M +Y ++ G
Sbjct: 591 VMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLC 650
Query: 494 KSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCN 529
A + +G PT ++R + N
Sbjct: 651 MCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVN 686
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 155/661 (23%), Positives = 262/661 (39%), Gaps = 53/661 (8%)
Query: 146 KPDIALHLFGKMRFQGMD---LDDYAYHVLLNALVEQGCFDAVAVVSKQISMRGFEND-V 201
P A+ + +M G D D Y +L+ G D + +GF D +
Sbjct: 64 SPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAI 123
Query: 202 TRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSG-FMIGIVVDALCKNSRFEQAGKLLED 260
T +LK LC K+ +A++ + ++ C+ F I++ LC +R ++A +LL
Sbjct: 124 AFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHM 183
Query: 261 FKD------RDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLV 314
D DVV +Y + + G D A G +P+V +N ++
Sbjct: 184 MADDRGGGSPPDVV----SYTTVINGFFKEGDSDKAYSTYHEMLD-RGILPDVVTYNSII 238
Query: 315 SRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLS 374
+ L K + + ++ M + + PD +T N++L +C +G AI K G+
Sbjct: 239 AALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVE 298
Query: 375 PNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDL 434
P+ + Y+ L++ LC +G EA ++ + GL P T L G +M L
Sbjct: 299 PDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 358
Query: 435 VIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNK 494
+ + I + I A K KV+ L+ S++ + + TY +I K
Sbjct: 359 LDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCK 418
Query: 495 SNRADIAARLLVEMEENGHKPTRALHRAVIR--CLCNMETPAKQF-LQLLNMQLSHQETN 551
S R + A +M + G P ++ ++I C CN A++ L++L+ + N
Sbjct: 419 SGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC---LN 475
Query: 552 FQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNT 611
+N ID R + ++ELM R G+ P N++ YNT
Sbjct: 476 TIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKP----NVIT---------------YNT 516
Query: 612 LIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHG 671
LI G C A K + A + M G+ P+ Y LI C + + + +E G
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576
Query: 672 RQVTSFIGNTLLLHALKTRDLYEA---WIRLRGMLINEQSKISLLGQLIGVFSGCIKVSQ 728
N +L +TR A ++R I E L + G K
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVR-----ITESGTQIELSTYNIILHGLCKNKL 631
Query: 729 DIEGLQKMIEQCF---PLDTYTYNILLRRL-SVSEIDHACELFNRMRRKGYEPDQWTFDI 784
+ LQ C L+ T+NI++ L V D A +LF G P+ WT+ +
Sbjct: 632 TDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 691
Query: 785 L 785
+
Sbjct: 692 M 692
Score = 110 bits (274), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 183/461 (39%), Gaps = 40/461 (8%)
Query: 98 TFHAIFKLLHCAKLTPLMVDFLENYKKDRYYHQVRFNDTLVMGYALAGKPDIALHLFGKM 157
T+++I L A+ ++ L K+ ++++ GY +G+P A+ KM
Sbjct: 233 TYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKM 292
Query: 158 RFQGMDLDDYAYHVLLNALVEQG-CFDAVAVVSKQISMRGFENDVTR------------- 203
R G++ D Y +L++ L + G C +A + ++ RG + ++T
Sbjct: 293 RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFD-SMTKRGLKPEITTYGTLLQGYATKGA 351
Query: 204 -----------------------TIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGI 240
+I++ KQ K+D+A+ F ++ + G
Sbjct: 352 LVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411
Query: 241 VVDALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSL 300
V+ LCK+ R E A E D + + Y+ + L + + A E +
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMID-EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLD- 469
Query: 301 EGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDV 360
G FN ++ KE R++E LF M + P+ +T NT++ +C AG +D
Sbjct: 470 RGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDE 529
Query: 361 AIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILAD 420
A++L GL PN + Y+ LIN C +A + K G+ P T +I+
Sbjct: 530 AMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ 589
Query: 421 ALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVA 480
L + + K+L + E ++ TY+ + LCK + + L M+
Sbjct: 590 GLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKL 649
Query: 481 SENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHR 521
T+ +I K R D A L V NG P +R
Sbjct: 650 EARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYR 690
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 116/556 (20%), Positives = 217/556 (39%), Gaps = 65/556 (11%)
Query: 304 VPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIE 363
P++ + L+ + RL F ++ + D + +L C A++
Sbjct: 84 TPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 143
Query: 364 LYKSR-SEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDH---GLFPGKKTLSILA 419
+ R +E G PN YN L+ LC + + EA E+L D G P + + +
Sbjct: 144 IVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVI 203
Query: 420 DALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKV 479
+ ++G ++ L+R I VTY+ I+ALCKA ++ + + + + +
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVM 263
Query: 480 ASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCN----METPAK 535
TY ++HG+ S + A L +M +G +P + ++ LC ME K
Sbjct: 264 PDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEA-RK 322
Query: 536 QFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQ 595
F + L + T Y + G + +LM R+G+ P +++
Sbjct: 323 IFDSMTKRGLKPEITT---YGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379
Query: 596 SYLK--------------RKNGI-PRKLYNTLIVG-LCKAMKANLAWGFMREMRHNGMYP 639
+Y K R+ G+ P + ++G LCK+ + A + +M G+ P
Sbjct: 380 AYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Query: 640 SMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLL------LHALKTRDLY 693
Y LI LC+ ++ ++ + G + + N+++ +++ L+
Sbjct: 440 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 499
Query: 694 EAWIRLR--------GMLINEQSKISLLGQLIGVFSGCIKV---------SQDIEG---- 732
E +R+ LIN + + + + SG + V S I G
Sbjct: 500 ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKI 559
Query: 733 ---------LQKMIEQCFPLDTYTYNILLRRL-SVSEIDHACELFNRMRRKGYEPDQWTF 782
++M D TYNI+L+ L A EL+ R+ G + + T+
Sbjct: 560 SRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTY 619
Query: 783 DILKCGLYNCLRTDEA 798
+I+ GL TD+A
Sbjct: 620 NIILHGLCKNKLTDDA 635
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/371 (20%), Positives = 154/371 (41%), Gaps = 39/371 (10%)
Query: 449 TYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNR-ADIAARLLVE 507
TY I C+A ++++G+ + + + L+ G R +D +L
Sbjct: 89 TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 148
Query: 508 MEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQ----ETNFQIYNFFIDGAG 563
M E G P + +++ LC+ E +++ L+LL+M + + Y I+G
Sbjct: 149 MTELGCIPNVFSYNILLKGLCD-ENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFF 207
Query: 564 HVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKAN 623
D A + Y M G++P + + YN++I LCKA +
Sbjct: 208 KEGDSDKAYSTYHEMLDRGILPDVVT-------------------YNSIIAALCKAQAMD 248
Query: 624 LAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLL 683
A + M NG+ P Y ++ CS+ +G + + G + + +LL
Sbjct: 249 KAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVE-PDVVTYSLL 307
Query: 684 L-------HALKTRDLYEAWIRLRGMLINEQSKISLLGQLIGVFSGCIKVSQDIEGLQKM 736
+ ++ R ++++ + RG+ + +I+ G L+ ++ + + L M
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTK-RGL----KPEITTYGTLLQGYATKGALVEMHGLLDLM 362
Query: 737 IEQCFPLDTYTYNILLRRLS-VSEIDHACELFNRMRRKGYEPDQWTFDILKCGLYNCLRT 795
+ D Y ++IL+ + ++D A +F++MR++G P+ T+ + L R
Sbjct: 363 VRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRV 422
Query: 796 DEAERRLEEMF 806
++A E+M
Sbjct: 423 EDAMLYFEQMI 433
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/391 (18%), Positives = 143/391 (36%), Gaps = 71/391 (18%)
Query: 137 LVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRG 196
L+ YA GK D A+ +F KMR QG++ + Y ++ L + G + + +Q+ G
Sbjct: 377 LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436
Query: 197 FE-NDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAG 255
++ ++ LC K + A E +++ C++ ++D+ CK R ++
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496
Query: 256 KLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSL--------------- 300
KL E R V Y+ + AG++D A++ L S+
Sbjct: 497 KLFE-LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLING 555
Query: 301 -------------------EGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPD 341
G P++ +N ++ L + R +L++ + E +
Sbjct: 556 YCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIE 615
Query: 342 GVTMNTVLCFFCKAGMVDVAIELYKSR--------------------------------- 368
T N +L CK + D A++++++
Sbjct: 616 LSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFV 675
Query: 369 --SEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDG 426
S GL PN Y + ++ G G E ++ + D+G L+ + L + G
Sbjct: 676 AFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 735
Query: 427 KFEQMKDLVIFALERNIKLRDVTYDKFISAL 457
+ + + E++ L T FI L
Sbjct: 736 EITRAGTYLSMIDEKHFSLEASTASLFIDLL 766
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 123/532 (23%), Positives = 222/532 (41%), Gaps = 32/532 (6%)
Query: 124 KDRYYHQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFD 183
K R + + L+ A K D+ + L +M+ G+ + Y Y +L+N +
Sbjct: 74 KSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLP 133
Query: 184 -AVAVVSKQISMRGFENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVV 242
A+AV+ K + + N VT + +L C K+I EAV Q+ + ++
Sbjct: 134 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 193
Query: 243 DALCKNSRFEQAGKLLEDFKDR---DDVVKLEKAYDVWLRNLVRAGRLDLALEFLK--SK 297
L +++ +A L++ + D+V Y V + L + G DLA L +
Sbjct: 194 HGLFLHNKASEAMALIDRMVAKGCQPDLV----TYGVVVNGLCKRGDTDLAFNLLNKMEQ 249
Query: 298 NSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGM 357
LE P V +N ++ L K + + +LF +M+ I P+ VT ++++ C G
Sbjct: 250 GKLE---PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306
Query: 358 VDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSI 417
A L E ++P+ ++ LI++ +G EA ++ + + P T S
Sbjct: 307 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 366
Query: 418 LADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMN 477
L + C + ++ K + F + ++ VTY+ I CK +VE G + E+S+
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 426
Query: 478 KVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQF 537
V + TY LI G ++ D+A + EM +G P + ++ LC K
Sbjct: 427 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486
Query: 538 LQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSY 597
+ +Q S E YN I+G + + ++ + G+ P + +
Sbjct: 487 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA-------- 538
Query: 598 LKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIK 649
YNT+I G C+ A +EM+ +G P+ CY LI+
Sbjct: 539 -----------YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579
Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 135/575 (23%), Positives = 223/575 (38%), Gaps = 28/575 (4%)
Query: 137 LVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRG 196
+V G A P + F + F G DY + N L E DAVA+ + + R
Sbjct: 20 VVRGNAATVSP--SFSFFWRRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRP 77
Query: 197 FENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQA-- 254
F + + + +L + K K D + +Q+ + + + I+++ C+ S+ A
Sbjct: 78 FPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALA 137
Query: 255 --GKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNF 312
GK+++ ++V L L + R+ A+ L + + GY P FN
Sbjct: 138 VLGKMMK-LGYEPNIVTLSS----LLNGYCHSKRISEAVA-LVDQMFVTGYQPNTVTFNT 191
Query: 313 LVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFG 372
L+ L N+ E L M PD VT V+ CK G D+A L +
Sbjct: 192 LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK 251
Query: 373 LSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMK 432
L P ++YN +I+ LC +A + K G+ P T S L LC G++
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311
Query: 433 DLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGF 492
L+ +ER I T+ I A K K+ ++ E+ + + S TY LI+GF
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Query: 493 NKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNF 552
+R D A ++ M P + +I+ C + + M N
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431
Query: 553 QIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQS---------------Y 597
YN I G D+A+ +++ M G+ P + + +L Y
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 598 LKRKNGIPR-KLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKN 656
L+R P YN +I G+CKA K W + G+ P + Y +I C +
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551
Query: 657 YDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRD 691
+ + ++ G S NTL+ L+ D
Sbjct: 552 KEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 586
Score = 113 bits (282), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 164/381 (43%), Gaps = 9/381 (2%)
Query: 136 TLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMR 195
+V G G D+A +L KM ++ Y+ +++ L + D + K++ +
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285
Query: 196 GFE-NDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQA 254
G N VT + ++ CLC + +A ++ + F ++DA K + +A
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 255 GKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLA---LEFLKSKNSLEGYVPEVFRFN 311
KL ++ R + Y + RLD A EF+ SK+ P+V +N
Sbjct: 346 EKLYDEMVKRS-IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF----PDVVTYN 400
Query: 312 FLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEF 371
L+ K R+ E ++F +M + + + VT N ++ +AG D+A E++K
Sbjct: 401 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 460
Query: 372 GLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQM 431
G+ PN + YN L++ LC +G +A V + + P T +I+ + +C+ GK E
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 432 KDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHG 491
DL + +K V Y+ IS C+ E + E+ + + Y LI
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Query: 492 FNKSNRADIAARLLVEMEENG 512
+ + +A L+ EM G
Sbjct: 581 RLRDGDREASAELIKEMRSCG 601
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 111/522 (21%), Positives = 199/522 (38%), Gaps = 59/522 (11%)
Query: 305 PEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIEL 364
P + F+ L+S + K N+ V L M+ I + T + ++ FC+ + +A+ +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 365 YKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCR 424
+ G PN + + L+N C EA ++ G P T + L L
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 425 DGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENT 484
K + L+ + + + VTY ++ LCK ++ + + +++ +
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 485 YIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNME--TPAKQFLQLLN 542
Y +I G K D A L EME G +P + ++I CLCN + A + L
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS--- 315
Query: 543 MQLSHQETNFQIYNFFIDGAGHVKRPDLARA--VYELMQRSGLVPQLGSNILMLQSY--- 597
+ ++ N ++ F VK L A +Y+ M + + P + + ++ +
Sbjct: 316 -DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 374
Query: 598 ------------LKRKNGIPRKL-YNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECY 644
+ K+ P + YNTLI G CK + REM G+ + Y
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 434
Query: 645 EELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLI 704
LI+ L + DM + + G NTLL K L +A M++
Sbjct: 435 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA------MVV 488
Query: 705 NEQSKISLLGQLIGVFSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRL-SVSEIDHA 763
E + S + I YTYNI++ + +++
Sbjct: 489 FEYLQRSKMEPTI----------------------------YTYNIMIEGMCKAGKVEDG 520
Query: 764 CELFNRMRRKGYEPDQWTFDILKCGLYNCLRTDEAERRLEEM 805
+LF + KG +PD ++ + G +EA+ +EM
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 168/387 (43%), Gaps = 15/387 (3%)
Query: 48 DQALSELGIRLTESFALQVLNYGKKTKDVLSCLKFFDWAGRQPHFHHTRATFHAIFKLLH 107
+Q E G+ + + + Y K D L+ K + G +P+ + +
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKY-KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306
Query: 108 CAKLTPLMVDFLENYKKDRYYHQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDY 167
+ + L+ D +E + V L+ + GK A L+ +M + +D
Sbjct: 307 WSDASRLLSDMIER----KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 168 AYHVLLNALVEQGCFD-AVAVVSKQISMRGFENDVTRTIMLKCLCKQKKIDEAVEYFQQL 226
Y L+N D A + +S F + VT ++K CK K+++E +E F+++
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Query: 227 VSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGR 286
+ I++ L + + A ++ ++ D V Y+ L L + G+
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS-DGVPPNIMTYNTLLDGLCKNGK 481
Query: 287 LDLAL---EFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGV 343
L+ A+ E+L+ ++ +E P ++ +N ++ + K ++ + +DLF ++ + PD V
Sbjct: 482 LEKAMVVFEYLQ-RSKME---PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 537
Query: 344 TMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNS 403
NT++ FC+ G + A L+K E G PN YN LI + DG + E++K
Sbjct: 538 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Query: 404 IDHGLFPGKKTLSILADALCRDGKFEQ 430
G T+ ++ + L DG+ ++
Sbjct: 598 RSCGFAGDASTIGLVTNML-HDGRLDK 623
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 93/423 (21%), Positives = 180/423 (42%), Gaps = 31/423 (7%)
Query: 409 FPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRD----VTYDKFISALCKANKVE 464
F GK + + L R+G E D + +K R + + K +SA+ K NK +
Sbjct: 40 FSGKTSYD-YREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFD 98
Query: 465 VGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVI 524
V + ++ + + TY LI+ F + ++ +A +L +M + G++P +++
Sbjct: 99 VVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLL 158
Query: 525 RCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLV 584
C+ + ++ + M ++ + N +N I G + A A+ + M G
Sbjct: 159 NGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQ 218
Query: 585 PQLGSNILMLQSYLKRKN------------------GIPRKLYNTLIVGLCKAMKANLAW 626
P L + +++ KR + G+ +YNT+I GLCK + A
Sbjct: 219 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGV--LIYNTIIDGLCKYKHMDDAL 276
Query: 627 GFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHA 686
+EM G+ P++ Y LI LC+ + +++ + F + L+
Sbjct: 277 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336
Query: 687 LKTRDLYEAWIRLRGMLINEQSKISLL--GQLIGVFSGCIKVSQDIEGLQKMIEQ-CFPL 743
+K L EA +L ++ S++ LI F ++ + + + M+ + CFP
Sbjct: 337 VKEGKLVEAE-KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP- 394
Query: 744 DTYTYNILLRRL-SVSEIDHACELFNRMRRKGYEPDQWTFDILKCGLYNCLRTDEAERRL 802
D TYN L++ ++ E+F M ++G + T++IL GL+ D A+
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 803 EEM 805
+EM
Sbjct: 455 KEM 457
Score = 34.3 bits (77), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 734 QKMIEQCFPLDTYTYNILL----RRLSVSEIDHACELFNRMRRKGYEPDQWTFDILKCGL 789
++M P + YTY+IL+ RR S++ A + +M + GYEP+ T L G
Sbjct: 105 EQMQNLGIPHNHYTYSILINCFCRR---SQLPLALAVLGKMMKLGYEPNIVTLSSLLNGY 161
Query: 790 YNCLRTDEAERRLEEMF 806
+ R EA +++MF
Sbjct: 162 CHSKRISEAVALVDQMF 178
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 163/769 (21%), Positives = 299/769 (38%), Gaps = 82/769 (10%)
Query: 80 LKFFDWAGRQPHFHHTRATFHAIFKLLHCAKLTPLMVDFLENYKKDRYYHQVRFNDTLVM 139
LKF W +QP H +L + L + R Y R L
Sbjct: 54 LKFLKWVVKQPGLETD-----------HIVQLVCITTHILV---RARMYDPAR--HILKE 97
Query: 140 GYALAGKPDIALHLFGKM--RFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRGF 197
++GK +FG + ++ + + Y +L+ + +G + + + + GF
Sbjct: 98 LSLMSGKSSF---VFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGF 154
Query: 198 ENDV-TRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGK 256
V T +L + K + + ++++ + C I+++ LC FE++
Sbjct: 155 NPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSY 214
Query: 257 LLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSR 316
L++ ++ Y+ L + GR A+E L S +G +V +N L+
Sbjct: 215 LMQKM-EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS-KGVDADVCTYNMLIHD 272
Query: 317 LLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPN 376
L + NR+ + + L DM++ I P+ VT NT++ F G V +A +L FGLSPN
Sbjct: 273 LCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN 332
Query: 377 GIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVI 436
+ +N LI+ +G+ EA ++ GL P + + +L D LC++ +F+ + +
Sbjct: 333 HVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYM 392
Query: 437 FALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSN 496
+ + +TY I LCK ++ ++ +E+S+ TY LI+GF K
Sbjct: 393 RMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVG 452
Query: 497 RADIAARLLVEMEENGHKPTRALHRAVIRCLCNME------------------------- 531
R A ++ + G P ++ +I C M
Sbjct: 453 RFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFN 512
Query: 532 ------------TPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQ 579
A++F++ M N ++ I+G G+ A +V++ M
Sbjct: 513 VLVTSLCKAGKVAEAEEFMRC--MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 570
Query: 580 RSGLVPQL------------GSNILMLQSYLKRKNGIPRK----LYNTLIVGLCKAMKAN 623
+ G P G ++ + +LK + +P +YNTL+ +CK+
Sbjct: 571 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 630
Query: 624 LAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLL 683
A EM + P Y LI LC + + E G + + + T
Sbjct: 631 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 690
Query: 684 LHALKTRDLYEAWIRLRGMLIN--EQSKISLLGQLIGVFSGCIKVSQDIEGLQKMIEQCF 741
+ + ++A I R + N I +I +S K+ + + L +M Q
Sbjct: 691 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG 750
Query: 742 PLDTYTYNILLRRLSV-SEIDHACELFNRMRRKGYEPDQWTFDILKCGL 789
+ TYNILL S ++ + L+ + G PD+ T L G+
Sbjct: 751 GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGI 799
Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 167/757 (22%), Positives = 295/757 (38%), Gaps = 105/757 (13%)
Query: 129 HQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVV 188
++V +N TL+ G++ GK IA L +M G+ + ++ L++ + +G F +
Sbjct: 297 NEVTYN-TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355
Query: 189 SKQISMRGF-ENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCK 247
+ +G ++V+ ++L LCK + D A ++ ++ CV ++D LCK
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 415
Query: 248 NSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFL-------KSKNS- 299
N ++A LL + +D + Y + + GR A E + S N
Sbjct: 416 NGFLDEAVVLLNEM-SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 474
Query: 300 --------------------------LEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDM 333
LEG+ + F FN LV+ L K ++ E + M
Sbjct: 475 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 534
Query: 334 KEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGST 393
I P+ V+ + ++ + +G A ++ ++ G P Y L+ LC G
Sbjct: 535 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 594
Query: 394 HEAYEVLKNSIDHGLFPGKKTL--SILADALCRDGKFEQMKDLVIFALERNIKLRDVTYD 451
EA + LK+ H + T+ + L A+C+ G + L ++R+I TY
Sbjct: 595 REAEKFLKSL--HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYT 652
Query: 452 KFISALCKANKVEVGYLIHSEL-SRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEE 510
IS LC+ K + L E +R N + ++ Y + G K+ + +M+
Sbjct: 653 SLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN 712
Query: 511 NGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDL 570
GH P A+I M K L M + N YN + G+ KR D+
Sbjct: 713 LGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH--GYSKRKDV 770
Query: 571 ARA--VYELMQRSGLVPQ--------LG---SNIL-----MLQSYLKRKNGIPRKLYNTL 612
+ + +Y + +G++P LG SN+L +L++++ R + R +N L
Sbjct: 771 STSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNML 830
Query: 613 IVGLCKAMKANLAWGFMR-----------------------------------EMRHNGM 637
I C + N A+ ++ EM G+
Sbjct: 831 ISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGI 890
Query: 638 YPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHAL-KTRDLYEAW 696
P Y LI LC + V + H + + + ++ AL K EA
Sbjct: 891 SPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH-KICPPNVAESAMVRALAKCGKADEAT 949
Query: 697 IRLRGMLINEQSKISLLGQLIGVFSGCIKVSQDIEGLQ--KMIEQC-FPLDTYTYNILLR 753
+ LR ML + + + + C K IE L+ ++ C LD +YN+L+
Sbjct: 950 LLLRFML--KMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLIT 1007
Query: 754 RLSV-SEIDHACELFNRMRRKGYEPDQWTFDILKCGL 789
L ++ A EL+ M+ G+ + T+ L GL
Sbjct: 1008 GLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 129/544 (23%), Positives = 228/544 (41%), Gaps = 40/544 (7%)
Query: 281 LVRAGRLDLALEFLKSKNSLEGYVPEVFR---------------FNFLVSRLLKENRLME 325
LVRA D A LK + + G VF ++ L+ L+E + +
Sbjct: 82 LVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQD 141
Query: 326 VFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAI-ELYKSRSEFGLSPNGIVYNYLI 384
++F M +P T N +L K+G DV++ K + + P+ +N LI
Sbjct: 142 SLEIFRLMGLYGFNPSVYTCNAILGSVVKSGE-DVSVWSFLKEMLKRKICPDVATFNILI 200
Query: 385 NSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIK 444
N LC +GS ++ +++ G P T + + C+ G+F+ +L+ + +
Sbjct: 201 NVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVD 260
Query: 445 LRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARL 504
TY+ I LC++N++ GYL+ ++ + +E TY LI+GF+ + IA++L
Sbjct: 261 ADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQL 320
Query: 505 LVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQI-YNFFIDGAG 563
L EM G P A+I + E K+ L++ M + T ++ Y +DG
Sbjct: 321 LNEMLSFGLSPNHVTFNALIDGHIS-EGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 379
Query: 564 HVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKAN 623
DLAR Y M+R+G+ + R Y +I GLCK +
Sbjct: 380 KNAEFDLARGFYMRMKRNGVC-------------------VGRITYTGMIDGLCKNGFLD 420
Query: 624 LAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLL 683
A + EM +G+ P + Y LI C + ++ + G I +TL+
Sbjct: 421 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480
Query: 684 LHALKTRDLYEAWIRLRGMLINEQSKISL-LGQLIGVFSGCIKVSQDIEGLQKMIEQCFP 742
+ + L EA M++ ++ L+ KV++ E ++ M
Sbjct: 481 YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540
Query: 743 LDTYTYNILLRRLSVS-EIDHACELFNRMRRKGYEPDQWTFDILKCGLYNCLRTDEAERR 801
+T +++ L+ S E A +F+ M + G+ P +T+ L GL EAE+
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600
Query: 802 LEEM 805
L+ +
Sbjct: 601 LKSL 604
Score = 109 bits (273), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 127/566 (22%), Positives = 223/566 (39%), Gaps = 33/566 (5%)
Query: 94 HTRA--TFHAIFKLLHCAKLTPLMVDFLENYKKDRYYHQVRFNDTLVMGYALAGKPDIAL 151
HTR TF+ + L A +F+ D D L+ GY +G+ A
Sbjct: 504 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAF 563
Query: 152 HLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQI-SMRGFENDVTRTIMLKCL 210
+F +M G + Y LL L + G K + ++ + V +L +
Sbjct: 564 SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 623
Query: 211 CKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRDDVVKL 270
CK + +AV F ++V + ++ LC+ + A ++ + R +V+
Sbjct: 624 CKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 683
Query: 271 EKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLF 330
+ Y ++ + +AG+ + F + ++L G+ P++ N ++ + ++ + DL
Sbjct: 684 KVMYTCFVDGMFKAGQWKAGIYFREQMDNL-GHTPDIVTTNAMIDGYSRMGKIEKTNDLL 742
Query: 331 MDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGD 390
+M P+ T N +L + K V + LY+S G+ P+ + + L+ +C
Sbjct: 743 PEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICES 802
Query: 391 GSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTY 450
++LK I G+ + T ++L C +G+ DLV I L T
Sbjct: 803 NMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTC 862
Query: 451 DKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEE 510
D +S L + ++ + ++ E+S+ YI LI+G + DI +V+ E
Sbjct: 863 DAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRV--GDIKTAFVVKEEM 920
Query: 511 NGHK--PTRALHRAVIRCL--CNMETPAKQFLQ-LLNMQLSHQETNFQIYNFFIDGAGHV 565
HK P A++R L C A L+ +L M+L +F G+V
Sbjct: 921 IAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNV 980
Query: 566 KRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLA 625
R V M GL L S YN LI GLC LA
Sbjct: 981 IEALELRVV---MSNCGLKLDLVS-------------------YNVLITGLCAKGDMALA 1018
Query: 626 WGFMREMRHNGMYPSMECYEELIKLL 651
+ EM+ +G + Y+ LI+ L
Sbjct: 1019 FELYEEMKGDGFLANATTYKALIRGL 1044
Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 105/507 (20%), Positives = 184/507 (36%), Gaps = 78/507 (15%)
Query: 59 TESFALQVLNYGKKTKDVLSCLKFFDWAGRQPHFHHTRATFHAIFKLLHCAKLTPLMVDF 118
T SF + YG + + L FD + H H T T+ ++ K L F
Sbjct: 543 TVSFDCLINGYGN-SGEGLKAFSVFDEMTKVGH-HPTFFTYGSLLKGLCKGGHLREAEKF 600
Query: 119 LENYKKDRYYHQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVE 178
L++ +TL+ +G A+ LFG+M + + D Y Y L++ L
Sbjct: 601 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 660
Query: 179 QGCFDAVAVVSKQISMRG--FENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGF 236
+G + +K+ RG N V T + + K + + + +Q+ +
Sbjct: 661 KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIV 720
Query: 237 MIGIVVDALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKS 296
++D + + E+ LL + +++ L Y++ L + R D++ FL
Sbjct: 721 TTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLT-TYNILLHGYSK--RKDVSTSFLLY 777
Query: 297 KNS-LEGYVPEV-----------------------------------FRFNFLVSRLLKE 320
++ L G +P+ + FN L+S+
Sbjct: 778 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 837
Query: 321 NRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVY 380
+ FDL M IS D T + ++ + + + S+ G+SP Y
Sbjct: 838 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 897
Query: 381 NYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDL------ 434
LIN LC G A+ V + I H + P S + AL + GK ++ L
Sbjct: 898 IGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK 957
Query: 435 ----------------------VIFALERNI-------KLRDVTYDKFISALCKANKVEV 465
VI ALE + KL V+Y+ I+ LC + +
Sbjct: 958 MKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAL 1017
Query: 466 GYLIHSELSRMNKVASENTYIQLIHGF 492
+ ++ E+ +A+ TY LI G
Sbjct: 1018 AFELYEEMKGDGFLANATTYKALIRGL 1044
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 143 bits (361), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/503 (23%), Positives = 220/503 (43%), Gaps = 22/503 (4%)
Query: 148 DIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRGFEND-VTRTIM 206
D+ L L +M +G+ + Y +++N +I G+E D VT + +
Sbjct: 89 DLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTL 148
Query: 207 LKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRDD 266
+ LC + ++ EA+E ++V + + +V+ LC N + A LL D
Sbjct: 149 INGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA-VLLIDRMVETG 207
Query: 267 VVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEV 326
E Y L+ + ++G+ LA+E L+ + + V +++ ++ L K+ L
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAV-KYSIIIDGLCKDGSLDNA 266
Query: 327 FDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINS 386
F+LF +M+ D + T++ FC AG D +L + + ++P+ + ++ LI+
Sbjct: 267 FNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC 326
Query: 387 LCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLR 446
+G EA E+ K I G+ P T + L D C++ + ++ ++ + +
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN 386
Query: 447 DVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLV 506
T++ I+ CKAN ++ G + ++S VA TY LI GF + + ++A L
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 507 EMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVK 566
EM +P ++ ++ LC+ P K ++ S E + IYN I G +
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Query: 567 RPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAW 626
+ D A ++ + G+ P + K YN +I GLCK + A
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDV-------------------KTYNIMIGGLCKKGSLSEAD 547
Query: 627 GFMREMRHNGMYPSMECYEELIK 649
R+M +G P+ Y LI+
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIR 570
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 179/409 (43%), Gaps = 22/409 (5%)
Query: 144 AGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRGFENDVT- 202
+G+ +A+ L KM + + LD Y ++++ L + G D + ++ ++GF+ D+
Sbjct: 225 SGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIII 284
Query: 203 RTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFK 262
T +++ C + D+ + + ++ + ++D K + +A +L ++
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI 344
Query: 263 DRDDVVKLEKAYDVWLRNLVRAGRLDLA---LEFLKSKNSLEGYVPEVFRFNFLVSRLLK 319
R + Y + + +LD A L+ + SK G P + FN L++ K
Sbjct: 345 QRG-ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK----GCGPNIRTFNILINGYCK 399
Query: 320 ENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIV 379
N + + +LF M + D VT NT++ FC+ G ++VA EL++ + P+ +
Sbjct: 400 ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459
Query: 380 YNYLINSLCGDGSTHEAYEVL------KNSIDHGLFPGKKTLSILADALCRDGKFEQMKD 433
Y L++ LC +G +A E+ K +D G++ +I+ +C K + D
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIY------NIIIHGMCNASKVDDAWD 513
Query: 434 LVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFN 493
L + +K TY+ I LCK + L+ ++ + TY LI
Sbjct: 514 LFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHL 573
Query: 494 KSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLN 542
A +A+L+ E++ G + + V+ L + K FL +L+
Sbjct: 574 GEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRL-KKSFLDMLS 621
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 123/541 (22%), Positives = 216/541 (39%), Gaps = 67/541 (12%)
Query: 305 PEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIEL 364
P + F+ L S + + + V DL M+ I+ + T++ ++ C+ + +A
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 365 YKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCR 424
+ G P+ + ++ LIN LC +G EA E++ ++ G P TL+ L + LC
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 425 DGKFEQMKDLV----------------------------IFAL-------ERNIKLRDVT 449
+GK L+ A+ ER IKL V
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 450 YDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEME 509
Y I LCK ++ + + +E+ A Y LI GF + R D A+LL +M
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 510 ENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQ-ETNFQIYNFFIDGAGHVKRP 568
+ P A+I C E ++ +L + + Y IDG +
Sbjct: 310 KRKITPDVVAFSALIDCFVK-EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
Query: 569 DLARAVYELMQRSGLVPQLGSNILMLQSYLKRK---NGIP--RKL-----------YNTL 612
D A + +LM G P + + +++ Y K +G+ RK+ YNTL
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Query: 613 IVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGR 672
I G C+ K +A +EM + P + Y+ L+ LC + + + +E
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488
Query: 673 QVTSFIGNTLLLHALKTRDLYEAW-----IRLRGMLINEQSKISLLGQLIGVFSGCIKVS 727
++ I N ++ + +AW + L+G+ + ++ ++G L C K S
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGL------CKKGS 542
Query: 728 QDIEGL--QKMIEQCFPLDTYTYNILLR-RLSVSEIDHACELFNRMRRKGYEPDQWTFDI 784
L +KM E + TYNIL+R L + + +L ++R G+ D T +
Sbjct: 543 LSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKM 602
Query: 785 L 785
+
Sbjct: 603 V 603
Score = 93.2 bits (230), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 114/508 (22%), Positives = 209/508 (41%), Gaps = 35/508 (6%)
Query: 325 EVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLI 384
+ DLF +M + P + + + + D+ ++L K G++ N + +I
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 385 NSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIK 444
N C A+ + I G P T S L + LC +G+ + +LV +E K
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 445 LRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARL 504
+T + ++ LC KV L+ + +E TY ++ KS + +A L
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 505 LVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGH 564
L +MEE K + +I LC + F M++ + + IY I G +
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 565 VKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKR----------KNGIPRKL------ 608
R D + M + + P + + ++ ++K K I R +
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354
Query: 609 YNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLE 668
Y +LI G CK + + A + M G P++ + LI C D + + +
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 669 GHGRQVTSFIGNTLL-----LHALKT-RDLYEAWI--RLRGMLINEQSKISLLGQLIGVF 720
G + NTL+ L L+ ++L++ + R+R +++ KI L G
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS--YKILLDG-----L 467
Query: 721 SGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRL-SVSEIDHACELFNRMRRKGYEPDQ 779
+ + +E +K+ + LD YNI++ + + S++D A +LF + KG +PD
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDV 527
Query: 780 WTFDILKCGLYNCLRTDEAE---RRLEE 804
T++I+ GL EA+ R++EE
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 153/383 (39%), Gaps = 38/383 (9%)
Query: 89 QPHFHHTRATFHAIFKLLHCAKLTPLMVDFLENYKKDRYYHQVRFNDTLVMGYALAGKPD 148
+ F T+ + K++ + T L ++ L ++ + ++ G G D
Sbjct: 205 ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLD 264
Query: 149 IALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRGFENDVTR-TIML 207
A +LF +M +G D Y L+ G +D A + + + R DV + ++
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324
Query: 208 KCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRDDV 267
C K+ K+ EA E ++++ ++D CK ++ ++A +L+ +
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384
Query: 268 VKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVF 327
+ + +++ + +A +D LE + K SL G V + +N L+ + +L
Sbjct: 385 PNI-RTFNILINGYCKANLIDDGLELFR-KMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 328 DLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELY----KSRSEF------------ 371
+LF +M ++ PD V+ +L C G + A+E++ KS+ E
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 372 -------------------GLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGK 412
G+ P+ YN +I LC GS EA + + + G P
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562
Query: 413 KTLSILADALCRDGKFEQMKDLV 435
T +IL A +G + L+
Sbjct: 563 CTYNILIRAHLGEGDATKSAKLI 585
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 149/339 (43%), Gaps = 55/339 (16%)
Query: 136 TLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMR 195
TL+ G+ AG+ D L M + + D A+ L++ V++G + K++ R
Sbjct: 287 TLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR 346
Query: 196 GFEND-VTRTIMLKCLCKQKKIDEAVEYFQQLVSGREC----------VSGF-------- 236
G D VT T ++ CK+ ++D+A +VS + C ++G+
Sbjct: 347 GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS-KGCGPNIRTFNILINGYCKANLIDD 405
Query: 237 ---------MIGIVVDAL---------CKNSRFEQAGKLLEDF---KDRDDVVKLEKAYD 275
+ G+V D + C+ + E A +L ++ + R D+V +Y
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV----SYK 461
Query: 276 VWLRNLVRAGRLDLALEFL----KSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFM 331
+ L L G + ALE KSK L+ + +N ++ + +++ + +DLF
Sbjct: 462 ILLDGLCDNGEPEKALEIFEKIEKSKMELD-----IGIYNIIIHGMCNASKVDDAWDLFC 516
Query: 332 DMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDG 391
+ + PD T N ++ CK G + A L++ E G SPNG YN LI + G+G
Sbjct: 517 SLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEG 576
Query: 392 STHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQ 430
++ ++++ G T+ ++ D L DG+ ++
Sbjct: 577 DATKSAKLIEEIKRCGFSVDASTVKMVVDML-SDGRLKK 614
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 4/208 (1%)
Query: 603 GIPRKLY--NTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMV 660
GI LY + +I C+ K +LA+ M ++ G P + LI LC
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEA 161
Query: 661 VGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGML-INEQSKISLLGQLIGV 719
+ +++ + G + T N L+ + +A + + M+ Q G ++ V
Sbjct: 162 LELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKV 221
Query: 720 FSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRLSV-SEIDHACELFNRMRRKGYEPD 778
+ + +E L+KM E+ LD Y+I++ L +D+A LFN M KG++ D
Sbjct: 222 MCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 281
Query: 779 QWTFDILKCGLYNCLRTDEAERRLEEMF 806
+ L G R D+ + L +M
Sbjct: 282 IIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Score = 37.7 bits (86), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 74/165 (44%), Gaps = 2/165 (1%)
Query: 620 MKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIG 679
+K + A +EM + P + + L ++ TK YD+V+ + +E G +
Sbjct: 51 IKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTL 110
Query: 680 NTLLLHALKTRDLYEAWIRLRGML-INEQSKISLLGQLIGVFSGCIKVSQDIEGLQKMIE 738
+ ++ + R L A+ + ++ + + LI +VS+ +E + +M+E
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170
Query: 739 QCFPLDTYTYNILLRRLSVS-EIDHACELFNRMRRKGYEPDQWTF 782
T N L+ L ++ ++ A L +RM G++P++ T+
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 130/527 (24%), Positives = 229/527 (43%), Gaps = 37/527 (7%)
Query: 131 VRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFD-AVAVVS 189
V FN L+ A K D+ + L +M+ + D Y+Y++L+N + A+AV+
Sbjct: 81 VEFN-KLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLG 139
Query: 190 KQISMRGFEND-VTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKN 248
K + + G+E D VT + +L C K+I EAV Q+ + ++ L +
Sbjct: 140 KMMKL-GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLH 198
Query: 249 SRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLK--SKNSLEGYVPE 306
++ +A L++ R L Y + L + G +DLAL LK K +E +
Sbjct: 199 NKASEAVALIDRMVARGCQPDLF-TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA---D 254
Query: 307 VFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYK 366
V + ++ L + + +LF +M I P+ VT N+++ C G A L
Sbjct: 255 VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 314
Query: 367 SRSEFGLSPNGIVYNYLINSLCGDGSTHEAY----EVLKNSIDHGLFPGKKTLSILADAL 422
E ++PN + ++ LI++ +G EA E++K SID +F T S L +
Sbjct: 315 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF----TYSSLINGF 370
Query: 423 CRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASE 482
C + ++ K + + ++ VTY+ I CKA +VE G + E+S+ V +
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430
Query: 483 NTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLN 542
TY LI G ++ D+A ++ +M +G P + ++ LC K +
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 490
Query: 543 MQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKN 602
+Q S E + YN I+G + + ++ + G+ P N++
Sbjct: 491 LQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP----NVI---------- 536
Query: 603 GIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIK 649
+Y T+I G C+ A REM+ +G P+ Y LI+
Sbjct: 537 -----IYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 578
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 176/422 (41%), Gaps = 43/422 (10%)
Query: 129 HQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVV 188
+ V FN TL+ G L K A+ L +M +G D + Y ++N L ++G D +
Sbjct: 184 NTVTFN-TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 189 SKQISMRGFENDVT-RTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCK 247
K++ E DV T ++ LC K +++A+ F ++ + + ++ LC
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 248 NSRFEQAGKLLEDFKDRD-------------------DVVKLEKAYDVWLRNLVRAG--- 285
R+ A +LL D +R +V+ EK YD ++ +
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362
Query: 286 ------------RLDLA---LEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLF 330
RLD A E + SK+ P V +N L+ K R+ E +LF
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCF----PNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 331 MDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGD 390
+M + + + VT NT++ +AG D+A +++K G+ P+ I Y+ L++ LC
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 391 GSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTY 450
G +A V + + P T +I+ + +C+ GK E DL + +K + Y
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538
Query: 451 DKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEE 510
IS C+ E + E+ + + TY LI + +A L+ EM
Sbjct: 539 TTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRS 598
Query: 511 NG 512
G
Sbjct: 599 CG 600
Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 105/489 (21%), Positives = 192/489 (39%), Gaps = 58/489 (11%)
Query: 304 VPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIE 363
+P + FN L+S + K N+ V L M+ +IS D + N ++ FC+ + +A+
Sbjct: 77 LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALA 136
Query: 364 LYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALC 423
+ + G P+ + + L+N C EA ++ P T + L L
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF 196
Query: 424 RDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASEN 483
K + L+ + R + TY ++ LCK +++ + ++ + A
Sbjct: 197 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 256
Query: 484 TYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNM 543
Y +I + A L EM+ G +P + ++IRCLCN + L +M
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 544 QLSHQETNFQIYNFFIDGAGHVKRPDLARA--VYELMQRSGLVPQLGSNILMLQSYLKRK 601
N ++ ID VK L A +Y+ M + + P + +
Sbjct: 317 IERKINPNVVTFSALID--AFVKEGKLVEAEKLYDEMIKRSIDPDIFT------------ 362
Query: 602 NGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVV 661
Y++LI G C + + A M +P++ Y LIK C K + +
Sbjct: 363 -------YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Query: 662 GVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQSKISLLGQLIGVFS 721
+ + G +GNT+ + L + L++A
Sbjct: 416 ELFREMSQRG-----LVGNTVTYNTL-IQGLFQA-------------------------- 443
Query: 722 GCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRL-SVSEIDHACELFNRMRRKGYEPDQW 780
G ++Q I +KM+ P D TY+ILL L +++ A +F +++ EPD +
Sbjct: 444 GDCDMAQKI--FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 501
Query: 781 TFDILKCGL 789
T++I+ G+
Sbjct: 502 TYNIMIEGM 510
Score = 36.2 bits (82), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 744 DTYTYNILL----RRLSVSEIDHACELFNRMRRKGYEPDQWTFDILKCGLYNCLRTDEAE 799
D Y+YNIL+ RR S++ A + +M + GYEPD T L G + R EA
Sbjct: 114 DLYSYNILINCFCRR---SQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 170
Query: 800 RRLEEMF 806
+++MF
Sbjct: 171 ALVDQMF 177
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/535 (22%), Positives = 229/535 (42%), Gaps = 22/535 (4%)
Query: 116 VDFLENYKKDRYYHQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNA 175
VD + + R V + L A + ++ L L +M +G+ Y +++N
Sbjct: 73 VDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINC 132
Query: 176 LVEQGCFDAVAVVSKQISMRGFEND-VTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVS 234
+I G+E D V +L LC + ++ EA+E ++V +
Sbjct: 133 FCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPT 192
Query: 235 GFMIGIVVDALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFL 294
+ +V+ LC N + A L++ + E Y L + ++G+ LA+E L
Sbjct: 193 LITLNTLVNGLCLNGKVSDAVVLIDRMVETG-FQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 295 KSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCK 354
+ K + +++ ++ L K+ L F+LF +M+ D +T NT++ FC
Sbjct: 252 R-KMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310
Query: 355 AGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKT 414
AG D +L + + +SPN + ++ LI+S +G EA ++LK + G+ P T
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTIT 370
Query: 415 LSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELS 474
+ L D C++ + E+ +V + + +T++ I+ CKAN+++ G + E+S
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430
Query: 475 RMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPA 534
+A+ TY L+ GF +S + ++A +L EM +P ++ ++ LC+
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELE 490
Query: 535 KQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILML 594
K ++ S E + IY I G + + D A ++ + G+
Sbjct: 491 KALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGV----------- 539
Query: 595 QSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIK 649
+ + YN +I LC+ + A R+M G P Y LI+
Sbjct: 540 --------KLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIR 586
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 191/406 (47%), Gaps = 16/406 (3%)
Query: 144 AGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRGFENDV-T 202
+G+ +A+ L KM + + LD Y ++++ L + G D + ++ ++GF+ D+ T
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIT 300
Query: 203 RTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFK 262
++ C + D+ + + ++ + + +++D+ K + +A +LL++
Sbjct: 301 YNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM 360
Query: 263 DRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENR 322
R + Y+ + + RL+ A++ + S +G P++ FN L++ K NR
Sbjct: 361 QRG-IAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS-KGCDPDIMTFNILINGYCKANR 418
Query: 323 LMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNY 382
+ + +LF +M + + VT NT++ FC++G ++VA +L++ + P+ + Y
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 383 LINSLCGDGSTHEAYEVL------KNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVI 436
L++ LC +G +A E+ K +D G++ I+ +C K + DL
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIY------MIIIHGMCNASKVDDAWDLFC 532
Query: 437 FALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSN 496
+ +KL Y+ IS LC+ + + ++ +++ E TY LI +
Sbjct: 533 SLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDD 592
Query: 497 RADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLN 542
A AA L+ EM+ +G + + VI L + E K FL +L+
Sbjct: 593 DATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELD-KSFLDMLS 637
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 124/586 (21%), Positives = 233/586 (39%), Gaps = 59/586 (10%)
Query: 215 KIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRDDVVKLEKAY 274
K D+AV+ F+ ++ R + + A+ K ++E L + + + +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKG-IAHSIYTL 126
Query: 275 DVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMK 334
+ + R +L A + L GY P+ FN L++ L E R+ E +L M
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKL-GYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185
Query: 335 EGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTH 394
E P +T+NT++ C G V A+ L E G PN + Y ++N +C G T
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 395 EAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFI 454
A E+L+ + + SI+ D LC+DG + +L + K +TY+ I
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 455 SALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHK 514
C A + + G + ++ + + T+ LI F K + A +LL EM + G
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 515 PTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQ-ETNFQIYNFFIDGAGHVKRPDLARA 573
P + ++I C E ++ +Q++++ +S + + +N I+G R D
Sbjct: 366 PNTITYNSLIDGFCK-ENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE 424
Query: 574 VYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMR 633
++ M G++ + YNTL+ G C++ K +A +EM
Sbjct: 425 LFREMSLRGVIANTVT-------------------YNTLVQGFCQSGKLEVAKKLFQEMV 465
Query: 634 HNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLY 693
+ P + Y+ L+ LC + + + +E ++ I ++ +
Sbjct: 466 SRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVD 525
Query: 694 EAW-----IRLRG---------MLINEQSKISLLGQ----------------------LI 717
+AW + L+G ++I+E + L + LI
Sbjct: 526 DAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILI 585
Query: 718 GVFSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRLSVSEIDHA 763
G + E +++M FP D T +++ LS E+D +
Sbjct: 586 RAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKS 631
Score = 116 bits (290), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 130/596 (21%), Positives = 235/596 (39%), Gaps = 79/596 (13%)
Query: 279 RNLVRAGRLDLALEFLKSKNSLEGY--------VPEVFRFNFLVSRLLKENRLMEVFDLF 330
RNL +L L +K+ ++++ + +P V FN L S + K + V L
Sbjct: 52 RNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALC 111
Query: 331 MDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGD 390
M+ I+ T++ ++ FC+ + A + G P+ +++N L+N LC +
Sbjct: 112 KQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLE 171
Query: 391 GSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTY 450
EA E++ ++ G P TL+ L + LC +GK L+ +E + +VTY
Sbjct: 172 CRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTY 231
Query: 451 DKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEE 510
++ +CK+ + + + ++ N Y +I G K D A L EME
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 291
Query: 511 NGHKPTRALHRAVIRCLCNM---ETPAKQFLQLLNMQLSHQETNFQI------------- 554
G K + +I CN + AK ++ ++S F +
Sbjct: 292 KGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLRE 351
Query: 555 -------------------YNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQ 595
YN IDG R + A + +LM G P + + +++
Sbjct: 352 ADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILIN 411
Query: 596 SYLKRKNGIPRKL-----------------YNTLIVGLCKAMKANLAWGFMREMRHNGMY 638
Y K N I L YNTL+ G C++ K +A +EM +
Sbjct: 412 GYCK-ANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR 470
Query: 639 PSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAW-- 696
P + Y+ L+ LC + + + +E ++ I ++ + +AW
Sbjct: 471 PDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDL 530
Query: 697 ---IRLRGMLINEQSKISLLGQLIGVFSGCIKVSQDIEGL--QKMIEQCFPLDTYTYNIL 751
+ L+G+ ++ ++ ++ +L C K S + +KM E+ D TYNIL
Sbjct: 531 FCSLPLKGVKLDARAYNIMISEL------CRKDSLSKADILFRKMTEEGHAPDELTYNIL 584
Query: 752 LR-RLSVSEIDHACELFNRMRRKGYEPDQWTFDILKCGLYNCLRTDEAERRLEEMF 806
+R L + A EL M+ G+ D T + + N L + E ++ +M
Sbjct: 585 IRAHLGDDDATTAAELIEEMKSSGFPADVSTVKM----VINMLSSGELDKSFLDML 636
Score = 76.6 bits (187), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 138/290 (47%), Gaps = 7/290 (2%)
Query: 135 DTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISM 194
+TL+ G+ AG+ D L M + + + + VL+++ V++G + K++
Sbjct: 302 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 361
Query: 195 RGF-ENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMI-GIVVDALCKNSRFE 252
RG N +T ++ CK+ +++EA++ ++S + C M I+++ CK +R +
Sbjct: 362 RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS-KGCDPDIMTFNILINGYCKANRID 420
Query: 253 QAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNF 312
+L + R V+ Y+ ++ ++G+L++A + + S P++ +
Sbjct: 421 DGLELFREMSLRG-VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS-RRVRPDIVSYKI 478
Query: 313 LVSRLLKENRLMEVFDLFMDMKEGQISPD-GVTMNTVLCFFCKAGMVDVAIELYKSRSEF 371
L+ L L + ++F +++ ++ D G+ M ++ C A VD A +L+ S
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYM-IIIHGMCNASKVDDAWDLFCSLPLK 537
Query: 372 GLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADA 421
G+ + YN +I+ LC S +A + + + G P + T +IL A
Sbjct: 538 GVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA 587
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 140 bits (352), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 157/706 (22%), Positives = 273/706 (38%), Gaps = 110/706 (15%)
Query: 80 LKFFDWAGRQPHFHHTRATFHAIFKLLHCAKLTPLMVDFLENYKKDRYYHQVRFNDTLVM 139
KFF W+ + F H+ ++ + +L CA++ YY +V+
Sbjct: 126 FKFFKWSMTRNGFKHSVESYCIVAHILFCARM---------------YYDANSVLKEMVL 170
Query: 140 GYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLN-ALVEQGCFDAVAVVSKQISMRGFE 198
A D+ L + G + D + VL++ ++E+ A+ SK R F
Sbjct: 171 SKADCDVFDV-LWSTRNVCVPGFGVFDALFSVLIDLGMLEE----AIQCFSKMKRFRVFP 225
Query: 199 NDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLL 258
+ +L K K D+ +F+ ++ + F I++D +CK E A L
Sbjct: 226 KTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLF 285
Query: 259 EDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLL 318
E+ K R G VP+ +N ++
Sbjct: 286 EEMKFR-------------------------------------GLVPDTVTYNSMIDGFG 308
Query: 319 KENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGI 378
K RL + F +MK+ PD +T N ++ FCK G + + +E Y+ GL PN +
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 368
Query: 379 VYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFA 438
Y+ L+++ C +G +A + + GL P + T + L DA C+ G L
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428
Query: 439 LERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRA 498
L+ ++ VTY I LC A +++ + ++ + + +Y LIHGF K+
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488
Query: 499 DIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFF 558
D A LL E++ G KP L+ I LC++E + + M+ + N IY
Sbjct: 489 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 548
Query: 559 IDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRK---------NGIPR--- 606
+D P + + M+ + + + +++ K K N I
Sbjct: 549 MDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG 608
Query: 607 -----KLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVV 661
++ +I GLCK + A +M G+ P Y L
Sbjct: 609 LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSL-------------- 654
Query: 662 GVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQSKISLLGQLIGVFS 721
++G+ +Q GN +L AL RD GM ++ + SL+ L S
Sbjct: 655 -----MDGNFKQ-----GN--VLEALALRDKMAE----IGMKLDLLAYTSLVWGL----S 694
Query: 722 GCIKVSQDIEGLQKMI-EQCFPLDTYTYNILLRRLSVSEIDHACEL 766
C ++ + L++MI E P + ++L + + ID A EL
Sbjct: 695 HCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 123/508 (24%), Positives = 201/508 (39%), Gaps = 62/508 (12%)
Query: 304 VPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIE 363
VP F+ L S L+ L E F MK ++ P + N +L F K G D
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 364 LYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALC 423
+K G P YN +I+ +C +G A + + GL P T + + D
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308
Query: 424 RDGK-------FEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRM 476
+ G+ FE+MKD+ E ++ +TY+ I+ CK K+ +G + E+
Sbjct: 309 KVGRLDDTVCFFEEMKDM---CCEPDV----ITYNALINCFCKFGKLPIGLEFYREMKGN 361
Query: 477 NKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQ 536
+ +Y L+ F K A + V+M G P + ++I C + +
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 421
Query: 537 FLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQS 596
F M E N Y IDG +R A ++ M +G++P L S
Sbjct: 422 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS------- 474
Query: 597 YLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKN 656
YN LI G KA + A + E++ G+ P + Y I LCS +
Sbjct: 475 ------------YNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEK 522
Query: 657 YDMVVGVMNHLEGHGRQVTSFIGNTL---------------LLHALKTRDLYEAWIRLRG 701
+ VMN ++ G + S I TL LL +K D+ E +
Sbjct: 523 IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDI-EVTVVTFC 581
Query: 702 MLINEQSKISLLGQLIGVFSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRLSV-SEI 760
+LI+ K L+ + + F+ ++S D GLQ + + ++ L +++
Sbjct: 582 VLIDGLCKNKLVSKAVDYFN---RISNDF-GLQA--------NAAIFTAMIDGLCKDNQV 629
Query: 761 DHACELFNRMRRKGYEPDQWTFDILKCG 788
+ A LF +M +KG PD+ + L G
Sbjct: 630 EAATTLFEQMVQKGLVPDRTAYTSLMDG 657
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 139 bits (351), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 123/540 (22%), Positives = 222/540 (41%), Gaps = 32/540 (5%)
Query: 116 VDFLENYKKDRYYHQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNA 175
VD K R + + L+ A K D+ + KM G+ + Y Y++++N
Sbjct: 50 VDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINC 109
Query: 176 LVEQGCFD-AVAVVSKQISMRGFENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVS 234
L + A+A++ K + + + VT +L C +I EAV Q+V
Sbjct: 110 LCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPD 169
Query: 235 GFMIGIVVDALCKNSRFEQAGKLLEDFKDR---DDVVKLEKAYDVWLRNLVRAGRLDLAL 291
+V L ++++ +A L+E + D+V Y + L + G DLAL
Sbjct: 170 TVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV----TYGAVINGLCKRGEPDLAL 225
Query: 292 EFLK--SKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVL 349
L K +E +V ++ ++ L K + + +LF +M I PD T ++++
Sbjct: 226 NLLNKMEKGKIEA---DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 350 CFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLF 409
C G A L E ++PN + +N LI++ +G EA ++ I +
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 410 PGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLI 469
P T + L + C + ++ + + + ++ VTY+ I+ CKA KV G +
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 470 HSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCN 529
++SR V + TY LIHGF +++ D A + +M +G P + ++ LC
Sbjct: 403 FRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462
Query: 530 METPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGS 589
K + +Q S E + YN +G + + ++ + G+ P + +
Sbjct: 463 NGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIA 522
Query: 590 NILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIK 649
YNT+I G CK A+ +M+ +G P Y LI+
Sbjct: 523 -------------------YNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIR 563
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 168/380 (44%), Gaps = 15/380 (3%)
Query: 136 TLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMR 195
++ G G+PD+AL+L KM ++ D Y ++++L + D + ++ +
Sbjct: 210 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK 269
Query: 196 GFENDV-TRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQA 254
G DV T + ++ CLC + +A ++ + + ++DA K + +A
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 255 GKLLEDFKDRD---DVVKLEKAYDVWLRNLVRAGRLDLA---LEFLKSKNSLEGYVPEVF 308
KL ++ R ++V Y+ + RLD A + SK+ L P+V
Sbjct: 330 EKLFDEMIQRSIDPNIV----TYNSLINGFCMHDRLDEAQQIFTLMVSKDCL----PDVV 381
Query: 309 RFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSR 368
+N L++ K ++++ +LF DM + + VT T++ F +A D A ++K
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 369 SEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKF 428
G+ PN + YN L++ LC +G +A V + + P T +I+++ +C+ GK
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501
Query: 429 EQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQL 488
E DL + +K + Y+ IS CK E Y + ++ + TY L
Sbjct: 502 EDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTL 561
Query: 489 IHGFNKSNRADIAARLLVEM 508
I + +A L+ EM
Sbjct: 562 IRAHLRDGDKAASAELIKEM 581
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 121/525 (23%), Positives = 186/525 (35%), Gaps = 96/525 (18%)
Query: 322 RLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYN 381
+L E DLF +M + + P V + +L K D+ I + G+S N YN
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 382 YLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALER 441
+IN LC A +L + G P TL+ L + C + + LV +E
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 442 NIKLRDVTYDKFISAL--------------------CKANKVEVGYLIHS---------E 472
+ VT+ + L C+ + V G +I+
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 473 LSRMNKV------ASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRC 526
L+ +NK+ A Y +I K D A L EM+ G +P + ++I C
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 527 LCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDG-AGHVKRPDLARAVYELMQRSGLVP 585
LCN + L +M N +N ID A K + + E++QRS
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS---- 340
Query: 586 QLGSNILMLQSYLK-------------------RKNGIPRKL-YNTLIVGLCKAMKANLA 625
+ NI+ S + K+ +P + YNTLI G CKA K
Sbjct: 341 -IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399
Query: 626 WGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLH 685
R+M G+ + Y LI + D V + G NTLL
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 459
Query: 686 ALKTRDLYEAWIRLRGMLINEQSKISLLGQLIGVFSGCIKVSQDIEGLQKMIEQCFPLDT 745
K L +A + VF E LQK + P D
Sbjct: 460 LCKNGKLEKAMV---------------------VF----------EYLQK--SKMEP-DI 485
Query: 746 YTYNILLRRL-SVSEIDHACELFNRMRRKGYEPDQWTFDILKCGL 789
YTYNI+ + +++ +LF + KG +PD ++ + G
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGF 530
Score = 73.2 bits (178), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 98/458 (21%), Positives = 178/458 (38%), Gaps = 38/458 (8%)
Query: 362 IELYKSRSEF---GLSPNGIVYNYLINSLCGDGSTH----EAYEVLKNSIDHGLFPGKKT 414
+ L K+ F G+ +G+ Y+ L + H EA ++ + FP
Sbjct: 8 VHLRKASPSFCLRGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVE 67
Query: 415 LSILADALCRDGKFEQMKDLVIFALER----NIKLRDVTYDKFISALCKANKVEVGYLIH 470
S L A+ + KF DLVI E+ + TY+ I+ LC+ +++ I
Sbjct: 68 FSKLLSAIAKMKKF----DLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAIL 123
Query: 471 SELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNM 530
++ ++ S T L++GF NR A L+ +M E G++P ++ L
Sbjct: 124 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 183
Query: 531 ETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSN 590
++ + M + + + Y I+G PDLA + M++ ++ ++
Sbjct: 184 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG----KIEAD 239
Query: 591 ILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKL 650
++ +Y+T+I LCK + A EM + G+ P + Y LI
Sbjct: 240 VV---------------IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 651 LCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINE-QSK 709
LC+ + +++ + N+L+ K L EA M+
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 710 ISLLGQLIGVFSGCIKVSQDIEGLQKMIEQ-CFPLDTYTYNILLRRL-SVSEIDHACELF 767
I LI F ++ + + M+ + C P D TYN L+ ++ ELF
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP-DVVTYNTLINGFCKAKKVVDGMELF 403
Query: 768 NRMRRKGYEPDQWTFDILKCGLYNCLRTDEAERRLEEM 805
M R+G + T+ L G + D A+ ++M
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 13/272 (4%)
Query: 135 DTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVE-QGCFDAVAVVSKQIS 193
++L+ G+ + + D A +F M + D Y+ L+N + + D + + + +S
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF-RDMS 407
Query: 194 MRGF-ENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFE 252
RG N VT T ++ + D A F+Q+VS + ++D LCKN + E
Sbjct: 408 RRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 467
Query: 253 QAGKLLEDFKDRDDVVKLEK---AYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFR 309
+A + E + K+E Y++ + +AG+++ + S SL+G P+V
Sbjct: 468 KAMVVFEYLQKS----KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL-SLKGVKPDVIA 522
Query: 310 FNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRS 369
+N ++S K+ E + LF+ MKE PD T NT++ + G + EL K
Sbjct: 523 YNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMR 582
Query: 370 EFGLSPNGIVYNYLINSLCGDGSTHEAY-EVL 400
+ + Y L+ + DG + + EVL
Sbjct: 583 SCRFAGDASTYG-LVTDMLHDGRLDKGFLEVL 613
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 154/707 (21%), Positives = 304/707 (42%), Gaps = 55/707 (7%)
Query: 124 KDRYYHQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFD 183
+D+ + + +V GY G + A K+ G+D D + Y L+ ++ D
Sbjct: 211 EDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLD 270
Query: 184 AVAVVSKQISMRGF-ENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGF-MIGIV 241
+ V ++ ++G N+V T ++ LC ++IDEA++ F ++ EC ++
Sbjct: 271 SAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKM-KDDECFPTVRTYTVL 329
Query: 242 VDALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLE 301
+ +LC + R +A L+++ ++ + Y V + +L + + A E L + +
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIH-TYTVLIDSLCSQCKFEKARELL-GQMLEK 387
Query: 302 GYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVA 361
G +P V +N L++ K + + D+ M+ ++SP+ T N ++ +CK+ V A
Sbjct: 388 GLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKA 446
Query: 362 IELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADA 421
+ + E + P+ + YN LI+ C G+ AY +L D GL P + T + + D+
Sbjct: 447 MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDS 506
Query: 422 LCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVAS 481
LC+ + E+ DL ++ + V Y I CKA KV+ +L+ ++ N + +
Sbjct: 507 LCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 566
Query: 482 ENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLC---NMETPAKQFL 538
T+ LIHG + A L +M + G +PT + +I L + + +F
Sbjct: 567 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 626
Query: 539 QLLNMQL---SHQETNFQ-----------------------------IYNFFIDGAGHVK 566
Q+L+ +H T F Y+ I G G +
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG 686
Query: 567 RPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAW 626
+ + A V + M+ +G P + + +++ L+ K G +K + + M+ +
Sbjct: 687 QTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYG-KQKGSEPELCAMSNMMEFDTVV 745
Query: 627 GFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLE-GHGRQVTSFIGNTLLLH 685
+ +M + + P+ + YE+LI +C N + V +H++ G + + N LL
Sbjct: 746 ELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSC 805
Query: 686 ALKTRDLYEAWIRLRGMLINEQSKISLLGQLIG---VFSGCIKVSQDIEG---LQKMIEQ 739
K + EA ++++ + L QL + G K + G Q +++
Sbjct: 806 CCKLKKHNEA-----AKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQC 860
Query: 740 CFPLDTYTYNILLRRLSVSEIDHA-CELFNRMRRKGYEPDQWTFDIL 785
+ D + I++ + + A ELFN M + G + T+ +L
Sbjct: 861 GYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLL 907
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 168/728 (23%), Positives = 271/728 (37%), Gaps = 139/728 (19%)
Query: 75 DVLSCLKFFDWAGRQPHFHHTRATFHAIFKLLHCAKLTPLMVDFLENYKKDRYYHQVRFN 134
D + L F W + P + H+ ++ ++ LL + Y V F
Sbjct: 102 DPKTALNFSHWISQNPRYKHSVYSYASLLTLL-----------------INNGYVGVVFK 144
Query: 135 DTLVMGYAL--AGKPDIALHLFGKM----RFQ-GMDLDDYAYHVLLNALVEQGCFDAVAV 187
L+M + G L L KM RF+ L Y+ LLN+L G D +
Sbjct: 145 IRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEM-- 202
Query: 188 VSKQISMRGFENDVTRTI-----MLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVV 242
KQ+ M E+ V I M+ CK ++EA +Y ++V G+
Sbjct: 203 --KQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEA---------GLDP 251
Query: 243 DALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEG 302
D F L+ + R D L+ A+ V+ ++ L+G
Sbjct: 252 D-------FFTYTSLIMGYCQRKD---LDSAFKVF------------------NEMPLKG 283
Query: 303 YVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAI 362
+ L+ L R+ E DLF+ MK+ + P T ++ C + A+
Sbjct: 284 CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEAL 343
Query: 363 ELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADAL 422
L K E G+ PN Y LI+SLC +A E+L ++ GL P T + L +
Sbjct: 344 NLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGY 403
Query: 423 CRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASE 482
C+ G E D+V R + TY++ I CK+N +H + +NK+
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-------VHKAMGVLNKMLER 456
Query: 483 N------TYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQ 536
TY LI G +S D A RLL M + G P + + ++I LC
Sbjct: 457 KVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK------- 509
Query: 537 FLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQS 596
KR + A +++ +++ G+ P N++M
Sbjct: 510 ----------------------------SKRVEEACDLFDSLEQKGVNP----NVVM--- 534
Query: 597 YLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKN 656
Y LI G CKA K + A + +M P+ + LI LC+
Sbjct: 535 ------------YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGK 582
Query: 657 YDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLIN-EQSKISLLGQ 715
+ + G Q T L+ LK D A+ R + ML + +
Sbjct: 583 LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTT 642
Query: 716 LIGVFSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRLS-VSEIDHACELFNRMRRKG 774
I + ++ + + KM E D +TY+ L++ + + + A ++ RMR G
Sbjct: 643 FIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
Query: 775 YEPDQWTF 782
EP Q TF
Sbjct: 703 CEPSQHTF 710
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 190/450 (42%), Gaps = 29/450 (6%)
Query: 380 YNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFAL 439
YN L+NSL G E +V ++ + P T + + + C+ G E+ V +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 440 ERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRAD 499
E + TY I C+ ++ + + +E+ +E Y LIHG + R D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 500 IAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFI 559
A L V+M+++ PT + +I+ LC E ++ + M+ + + N Y I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 560 DGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKR---KNGI-------PRKL- 608
D + + AR + M GL+P + + ++ Y KR ++ + RKL
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 609 -----YNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGV 663
YN LI G CK+ + A G + +M + P + Y LI C + N+D +
Sbjct: 426 PNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 664 MNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAW-----IRLRGMLINEQSKISLLGQLIG 718
++ + G + +++ K++ + EA + +G+ N + + LI
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPN----VVMYTALID 540
Query: 719 VFSGCIKVSQDIEGLQKMIEQ-CFPLDTYTYNILLRRLSV-SEIDHACELFNRMRRKGYE 776
+ KV + L+KM+ + C P ++ T+N L+ L ++ A L +M + G +
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLP-NSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 599
Query: 777 PDQWTFDILKCGLYNCLRTDEAERRLEEMF 806
P T IL L D A R ++M
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQML 629
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 169/415 (40%), Gaps = 24/415 (5%)
Query: 98 TFHAIFKLLHCAKLTPLMVDFLENYKKDRYYHQVRFNDTLVMGYALAGKPDIALHLFGKM 157
T+ ++ L +K D ++ ++ V L+ GY AGK D A + KM
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 158 RFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRGFENDV-TRTIMLKCLCKQKKI 216
+ + ++ L++ L G ++ +++ G + V T TI++ L K
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618
Query: 217 DEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYDV 276
D A FQQ++S + C+ R A ++ ++ + V Y
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE-NGVSPDLFTYSS 677
Query: 277 WLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKE---------------N 321
++ G+ + A + LK G P F L+ LL+ +
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRD-TGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMS 736
Query: 322 RLME---VFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYK--SRSEFGLSPN 376
+ME V +L M E ++P+ + ++ C+ G + VA +++ R+E G+SP+
Sbjct: 737 NMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNE-GISPS 795
Query: 377 GIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVI 436
+V+N L++ C +EA +V+ + I G P ++ +L L + G+ E+ +
Sbjct: 796 ELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQ 855
Query: 437 FALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHG 491
L+ ++ + I + K VE Y + + + + S TY LI G
Sbjct: 856 NLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 180/393 (45%), Gaps = 7/393 (1%)
Query: 136 TLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMR 195
TL+ G L K A+ L +M +G + Y V++N L ++G D + ++
Sbjct: 195 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAA 254
Query: 196 GFENDVTR-TIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQA 254
E DV ++ LCK + +D+A+ F+++ + + ++ LC R+ A
Sbjct: 255 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 314
Query: 255 GKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKS--KNSLEGYVPEVFRFNF 312
+LL D ++ L ++ + V+ G+ A + K S++ P++F +N
Sbjct: 315 SQLLSDMIEKKINPNLV-TFNALIDAFVKEGKFVEAEKLYDDMIKRSID---PDIFTYNS 370
Query: 313 LVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFG 372
LV+ +RL + +F M PD VT NT++ FCK+ V+ EL++ S G
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 430
Query: 373 LSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMK 432
L + + Y LI L DG A +V K + G+ P T SIL D LC +GK E+
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490
Query: 433 DLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGF 492
++ + + IKL Y I +CKA KV+ G+ + LS + TY +I G
Sbjct: 491 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550
Query: 493 NKSNRADIAARLLVEMEENGHKPTRALHRAVIR 525
A LL +M+E+G P + +IR
Sbjct: 551 CSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 583
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 128/523 (24%), Positives = 223/523 (42%), Gaps = 29/523 (5%)
Query: 131 VRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFD-AVAVVS 189
V FN L+ A K D+ + L KM+ + Y Y++L+N + A+A++
Sbjct: 86 VEFN-KLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLG 144
Query: 190 KQISMRGFEND-VTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKN 248
K + + G+E VT + +L C K+I +AV Q+V ++ L +
Sbjct: 145 KMMKL-GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 249 SRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPE-- 306
++ +A L++ R L Y V + L + G DLAL L N +E E
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLV-TYGVVVNGLCKRGDTDLALNLL---NKMEAAKIEAD 259
Query: 307 VFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYK 366
V FN ++ L K + + +LF +M+ I P+ VT ++++ C G A +L
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 367 SRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDG 426
E ++PN + +N LI++ +G EA ++ + I + P T + L + C
Sbjct: 320 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Query: 427 KFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYI 486
+ ++ K + F + ++ VTY+ I CK+ +VE G + E+S V TY
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 487 QLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLS 546
LI G D A ++ +M +G P + ++ LCN K MQ S
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 499
Query: 547 HQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPR 606
+ + IY I+G + D ++ + G+ P + +
Sbjct: 500 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT----------------- 542
Query: 607 KLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIK 649
YNT+I GLC A+ +++M+ +G P+ Y LI+
Sbjct: 543 --YNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 583
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 130/583 (22%), Positives = 244/583 (41%), Gaps = 38/583 (6%)
Query: 146 KPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQIS-MRGFENDVTRT 204
K D A+ LFG M ++ LL+A+ + FD V + +++ + T
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 205 IMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKD- 263
I++ C C++ +I A+ +++ S + +++ C R A L++ +
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 264 --RDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKEN 321
R D + + + L + A+ L + G P + + +V+ L K
Sbjct: 185 GYRPDTI----TFTTLIHGLFLHNKASEAVA-LVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 322 RLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYN 381
+L M+ +I D V NT++ CK VD A+ L+K G+ PN + Y+
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 382 YLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALER 441
LI+ LC G +A ++L + I+ + P T + L DA ++GKF + + L ++R
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 442 NIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIA 501
+I TY+ ++ C ++++ + + + TY LI GF KS R +
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 502 ARLLVEMEENGHKPTRALHRAVIRCL---CNMETPAKQFLQLLNMQLSHQETNFQIYNFF 558
L EM G + +I+ L + + K F Q+++ + Y+
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS---DGVPPDIMTYSIL 476
Query: 559 IDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCK 618
+DG + + + A V++ MQ+S + L Y+ Y T+I G+CK
Sbjct: 477 LDGLCNNGKLEKALEVFDYMQKSEI---------KLDIYI----------YTTMIEGMCK 517
Query: 619 AMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFI 678
A K + W + G+ P++ Y +I LCS + ++ ++ G S
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577
Query: 679 GNTLLLHALKTRDLYEAWIRLRGM----LINEQSKISLLGQLI 717
NTL+ L+ D + +R M + + S I L+ ++
Sbjct: 578 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 620
Score = 99.8 bits (247), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 111/519 (21%), Positives = 197/519 (37%), Gaps = 51/519 (9%)
Query: 304 VPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIE 363
+P + FN L+S + K + V L M+ +I T N ++ FC+ + +A+
Sbjct: 82 LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALA 141
Query: 364 LYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALC 423
L + G P+ + + L+N C +A ++ ++ G P T + L L
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 424 RDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASEN 483
K + LV ++R + VTY ++ LCK ++ + +++ A
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV 261
Query: 484 TYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNM 543
+ +I K D A L EME G +P + ++I CLC+ + L +M
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321
Query: 544 QLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGS-NILM--------- 593
N +N ID + A +Y+ M + + P + + N L+
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381
Query: 594 -----LQSYLKRKNGIPRKL-YNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEEL 647
+ ++ K+ P + YNTLI G CK+ + REM H G+ Y L
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 648 IKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQ 707
I+ L + D V + G D+ I L G+ N
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVP----------------PDIMTYSILLDGLCNNG- 484
Query: 708 SKISLLGQLIGVFSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRL-SVSEIDHACEL 766
K+ + +E M + LD Y Y ++ + ++D +L
Sbjct: 485 -----------------KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 527
Query: 767 FNRMRRKGYEPDQWTFDILKCGLYNCLRTDEAERRLEEM 805
F + KG +P+ T++ + GL + EA L++M
Sbjct: 528 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 566
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 156/372 (41%), Gaps = 30/372 (8%)
Query: 71 KKTKDVLSCLKFFDWAGRQPHFHHTRATFHAIFKLLHCAKLTPLMVDFLENYKKDRYYHQ 130
+ D L+ K + G +P+ + + + + L+ D +E K +
Sbjct: 274 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE---KKINPNL 330
Query: 131 VRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFD-AVAVVS 189
V FN L+ + GK A L+ M + +D D + Y+ L+N D A +
Sbjct: 331 VTFN-ALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389
Query: 190 KQISMRGFENDVTRTIMLKCLCKQKKIDEAVEYFQQ-----LVSGRECVSGFMIGIVVDA 244
+S F + VT ++K CK K++++ E F++ LV + + G+ D
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449
Query: 245 LCKNSR--FEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFL----KSKN 298
C N++ F+Q D V Y + L L G+L+ ALE KS+
Sbjct: 450 DCDNAQKVFKQMVS--------DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 299 SLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMV 358
L+ Y+ + ++ + K ++ + +DLF + + P+ VT NT++ C ++
Sbjct: 502 KLDIYI-----YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 359 DVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSIL 418
A L K E G PN YN LI + DG + E+++ T+ ++
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 616
Query: 419 ADALCRDGKFEQ 430
A+ L DG+ ++
Sbjct: 617 ANML-HDGRLDK 627
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 132/510 (25%), Positives = 219/510 (42%), Gaps = 35/510 (6%)
Query: 302 GYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVA 361
GY P+ F+ LV+ E R+ E L M E + PD VT++T++ C G V A
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194
Query: 362 IELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADA 421
+ L E+G P+ + Y ++N LC G++ A ++ + + + SI+ D+
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 254
Query: 422 LCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVAS 481
LC+DG F+ L + IK VTY I LC K + G + E+ N +
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 482 ENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLL 541
T+ LI F K + A L EM G P + ++I C E + Q+
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK-ENCLHEANQMF 373
Query: 542 NMQLSHQ-ETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKR 600
++ +S E + Y+ I+ KR D ++ + GL+P
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP--------------- 418
Query: 601 KNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMV 660
N I YNTL++G C++ K N A +EM G+ PS+ Y L+ LC +
Sbjct: 419 -NTIT---YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 474
Query: 661 VGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQSKISLLGQLIGVF 720
+ + ++ + I N ++ + +AW L L ++ K ++ + +
Sbjct: 475 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAW-SLFCSLSDKGVKPDVVTYNVMIG 533
Query: 721 SGCIK--VSQDIEGLQKMIEQ-CFPLDTYTYNILLR-RLSVSEIDHACELFNRMRRKGYE 776
C K +S+ +KM E C P D +TYNIL+R L S + + EL M+ G+
Sbjct: 534 GLCKKGSLSEADMLFRKMKEDGCTP-DDFTYNILIRAHLGGSGLISSVELIEEMKVCGFS 592
Query: 777 PDQWTFDILKCGLYNCLRTDEAERRLEEMF 806
D T ++ L ++RRL++ F
Sbjct: 593 ADSSTIKMVIDML--------SDRRLDKSF 614
Score = 133 bits (334), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 120/540 (22%), Positives = 228/540 (42%), Gaps = 32/540 (5%)
Query: 116 VDFLENYKKDRYYHQ-VRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLN 174
+D E+ + R + FN L A + D+ L M G++ D Y +++N
Sbjct: 55 IDLFESMIQSRPLPTPIDFN-RLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 113
Query: 175 ALV-EQGCFDAVAVVSKQISMRGFEND-VTRTIMLKCLCKQKKIDEAVEYFQQLVSGREC 232
++ A +V+ + + G+E D +T + ++ C + ++ EAV ++V ++
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKL-GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 233 VSGFMIGIVVDALCKNSRFEQAGKLLE---DFKDRDDVVKLEKAYDVWLRNLVRAGRLDL 289
+ +++ LC R +A L++ ++ + D E Y L L ++G L
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPD----EVTYGPVLNRLCKSGNSAL 228
Query: 290 ALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVL 349
AL+ + K V +++ ++ L K+ + LF +M+ I D VT ++++
Sbjct: 229 ALDLFR-KMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 350 CFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLF 409
C G D ++ + + P+ + ++ LI+ +G EA E+ I G+
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 410 PGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLI 469
P T + L D C++ + + + + + VTY I++ CKA +V+ G +
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 470 HSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCN 529
E+S + + TY L+ GF +S + + A L EM G P+ + ++ LC+
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 530 METPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGS 589
K MQ S IYN I G + + D A +++ + G+ P + +
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527
Query: 590 NILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIK 649
YN +I GLCK + A R+M+ +G P Y LI+
Sbjct: 528 -------------------YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIR 568
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 98/235 (41%), Gaps = 43/235 (18%)
Query: 118 FLENYKKDRYYHQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALV 177
F E K + + +N TLV+G+ +GK + A LF +M +G+ Y +LL+ L
Sbjct: 408 FREISSKGLIPNTITYN-TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466
Query: 178 EQGCFDAVAVVSKQISMRGFENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFM 237
+ G ++++A+E F+++ R + +
Sbjct: 467 DNG----------------------------------ELNKALEIFEKMQKSRMTLGIGI 492
Query: 238 IGIVVDALCKNSRFEQAGKLLEDFKD---RDDVVKLEKAYDVWLRNLVRAGRLDLALEFL 294
I++ +C S+ + A L D + DVV Y+V + L + G L A + L
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV----TYNVMIGGLCKKGSLSEA-DML 547
Query: 295 KSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVL 349
K +G P+ F +N L+ L + L+ +L +MK S D T+ V+
Sbjct: 548 FRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602
Score = 40.0 bits (92), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 83/197 (42%), Gaps = 7/197 (3%)
Query: 588 GSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEEL 647
G+++L S + K +L N ++ +K N A M + P+ + L
Sbjct: 22 GTSLLHYSSITEAKLSYKERLRNGIV-----DIKVNDAIDLFESMIQSRPLPTPIDFNRL 76
Query: 648 IKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLL-LHALKTRDLYEAWIRLRGMLINE 706
+ TK YD+V+G +E +G + + ++ + K + L+ + R +
Sbjct: 77 CSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGY 136
Query: 707 QSKISLLGQLIGVFSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRLSV-SEIDHACE 765
+ L+ F +VS+ + + +M+E D T + L+ L + + A
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 766 LFNRMRRKGYEPDQWTF 782
L +RM G++PD+ T+
Sbjct: 197 LIDRMVEYGFQPDEVTY 213
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 186/398 (46%), Gaps = 14/398 (3%)
Query: 135 DTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQG-CFDAVAVVSKQIS 193
++L+ G+ + A+ L +M G D + L++ L + +AVA+V + +
Sbjct: 149 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMV- 207
Query: 194 MRGFEND-VTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFE 252
++G + D VT ++ LCK+ + D A+ ++ G+ + ++D LCK +
Sbjct: 208 VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMD 267
Query: 253 QAGKLLEDFKDR---DDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYV-PEVF 308
A L + + DV Y+ + L GR A L + LE + P++
Sbjct: 268 DAFDLFNKMETKGIKPDVF----TYNPLISCLCNYGRWSDASRLLS--DMLEKNINPDLV 321
Query: 309 RFNFLVSRLLKENRLMEVFDLFMDM-KEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKS 367
FN L+ +KE +L+E L+ +M K PD V NT++ FCK V+ +E+++
Sbjct: 322 FFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE 381
Query: 368 RSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGK 427
S+ GL N + Y LI+ A V K + G+ P T +IL D LC +G
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN 441
Query: 428 FEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQ 487
E + + +R++KL VTY I ALCKA KVE G+ + LS + TY
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 501
Query: 488 LIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIR 525
++ GF + + A L VEM+E+G P + +IR
Sbjct: 502 MMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIR 539
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 115/547 (21%), Positives = 205/547 (37%), Gaps = 67/547 (12%)
Query: 143 LAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRGFENDVT 202
L G P L + F G DD ++ L + DA+ + + R F + V
Sbjct: 20 LKGNPRTTLCW--ERSFAGASSDDCRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVE 77
Query: 203 RTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQA----GKLL 258
+ +L + K K D + +Q+ + + + I ++ C+ S+ A GK++
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 259 EDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLL 318
+ +V L L R+ A+ + + GY P+ F LV L
Sbjct: 138 K-LGYGPSIVTLNS----LLNGFCHGNRISEAVALVDQMVEM-GYQPDTVTFTTLVHGLF 191
Query: 319 KENRLME-----------------------------------VFDLFMDMKEGQISPDGV 343
+ N+ E +L M++G+I D V
Sbjct: 192 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 251
Query: 344 TMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNS 403
NT++ CK +D A +L+ G+ P+ YN LI+ LC G +A +L +
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 404 IDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRD-VTYDKFISALCKANK 462
++ + P + L DA ++GK + + L ++ D V Y+ I CK +
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 463 VEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRA 522
VE G + E+S+ V + TY LIHGF ++ D A + +M +G P +
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431
Query: 523 VIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSG 582
++ LCN + MQ + + Y I+ + + ++ + G
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491
Query: 583 LVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSME 642
+ P + + Y T++ G C+ A EM+ +G P+
Sbjct: 492 VKPNVVT-------------------YTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSG 532
Query: 643 CYEELIK 649
Y LI+
Sbjct: 533 TYNTLIR 539
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 127/604 (21%), Positives = 238/604 (39%), Gaps = 75/604 (12%)
Query: 193 SMRGFENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFE 252
S G +D R + + + + K+D+A+ F +V R S ++ A+ K ++F+
Sbjct: 33 SFAGASSDDCRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFD 92
Query: 253 QAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNF 312
L E ++ L Y +++ R +L LAL L L GY P +
Sbjct: 93 LVISLGEQMQNLGISHNL-YTYSIFINYFCRRSQLSLALAILGKMMKL-GYGPSI----- 145
Query: 313 LVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFG 372
VT+N++L FC + A+ L E G
Sbjct: 146 ------------------------------VTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 373 LSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMK 432
P+ + + L++ L EA +++ + G P T + + LC+ G+ +
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 433 DLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGF 492
+L+ + I+ V Y+ I LCK ++ + + +++ TY LI
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 493 NKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLC---NMETPAKQFLQLLNMQLSHQE 549
R A+RLL +M E P A+I + K + +++ + H
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK--HCF 353
Query: 550 TNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLY 609
+ YN I G KR + V+ M + GLV G+ + Y
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV---GNTV----------------TY 394
Query: 610 NTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEG 669
TLI G +A + A ++M +G++P + Y L+ LC+ N + + V +++
Sbjct: 395 TTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQK 454
Query: 670 HGRQVTSFIGNTLLLHALKTRDLYEAW-----IRLRGMLINEQSKISLLGQLIGVFSGCI 724
++ T++ K + + W + L+G+ N + +++ C
Sbjct: 455 RDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF------CR 508
Query: 725 K-VSQDIEGLQKMIEQCFPL-DTYTYNILLR-RLSVSEIDHACELFNRMRRKGYEPDQWT 781
K + ++ + L +++ PL ++ TYN L+R RL + + EL MR G+ D T
Sbjct: 509 KGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDAST 568
Query: 782 FDIL 785
F ++
Sbjct: 569 FGLV 572
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 114/505 (22%), Positives = 194/505 (38%), Gaps = 59/505 (11%)
Query: 305 PEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIEL 364
P + F+ L+S + K N+ V L M+ IS + T + + +FC+ + +A+ +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 365 YKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCR 424
+ G P+ + N L+N C EA ++ ++ G P T + L L +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 425 DGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENT 484
K + LV + + + VTY I+ LCK + ++ + +++ + A
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 485 YIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQ 544
Y +I G K D A L +ME G KP + +I CLCN + L +M
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 545 LSHQETNFQIYNFFIDGAGHVKRPDLARA--VYELMQRSGLVPQLGSNILMLQSYLKRKN 602
+ + +N ID VK L A +Y+ M +K K+
Sbjct: 313 EKNINPDLVFFNALIDA--FVKEGKLVEAEKLYDEM-------------------VKSKH 351
Query: 603 GIPRKL-YNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVV 661
P + YNTLI G CK + REM G+ + Y LI ++ D
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411
Query: 662 GVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQSKISLLGQLIGVFS 721
V + G +H D+ I L G+ N + +L+ VF
Sbjct: 412 MVFKQMVSDG------------VHP----DIMTYNILLDGLCNNGNVETALV-----VF- 449
Query: 722 GCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRL-SVSEIDHACELFNRMRRKGYEPDQW 780
+ M ++ LD TY ++ L +++ +LF + KG +P+
Sbjct: 450 ------------EYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVV 497
Query: 781 TFDILKCGLYNCLRTDEAERRLEEM 805
T+ + G +EA+ EM
Sbjct: 498 TYTTMMSGFCRKGLKEEADALFVEM 522
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 162/393 (41%), Gaps = 36/393 (9%)
Query: 409 FPGKKTLSILADALCRDGKF-------EQMKDLVIFALERNIKLRDVTYDKFISALCKAN 461
FP S L A+ + KF EQM++L + N+ TY FI+ C+ +
Sbjct: 72 FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL---GISHNL----YTYSIFINYFCRRS 124
Query: 462 KVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHR 521
++ + I ++ ++ S T L++GF NR A L+ +M E G++P
Sbjct: 125 QLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFT 184
Query: 522 AVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRS 581
++ L ++ + M + + + Y I+G PDLA + M++
Sbjct: 185 TLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG 244
Query: 582 GLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSM 641
++ ++++ +YNT+I GLCK + A+ +M G+ P +
Sbjct: 245 ----KIEADVV---------------IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDV 285
Query: 642 ECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRG 701
Y LI LC+ + +++ + N L+ +K L EA
Sbjct: 286 FTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDE 345
Query: 702 MLINEQ--SKISLLGQLIGVFSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRL-SVS 758
M+ ++ + LI F +V + +E ++M ++ +T TY L+
Sbjct: 346 MVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQAR 405
Query: 759 EIDHACELFNRMRRKGYEPDQWTFDILKCGLYN 791
+ D+A +F +M G PD T++IL GL N
Sbjct: 406 DCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCN 438
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 151/382 (39%), Gaps = 46/382 (12%)
Query: 87 GRQPHFHHTRATFHAIFKLLHCAKLTP-LMVDFLENYKKDRYYHQVRFNDTLVMGYALAG 145
G QP T+ A+ L C + P L ++ L +K + V +T++ G
Sbjct: 210 GCQPDL----VTYGAVINGL-CKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYK 264
Query: 146 KPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCF-DAVAVVSKQISMRGFENDVTRT 204
D A LF KM +G+ D + Y+ L++ L G + DA ++S + + V
Sbjct: 265 HMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFN 324
Query: 205 IMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMI-GIVVDALCKNSRFEQAGKLLEDFKD 263
++ K+ K+ EA + + ++V + C + ++ CK R E+ ++ +
Sbjct: 325 ALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384
Query: 264 RDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFL---------- 313
R +V Y + +A D A K S +G P++ +N L
Sbjct: 385 RG-LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS-DGVHPDIMTYNILLDGLCNNGNV 442
Query: 314 -------------------------VSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTV 348
+ L K ++ + +DLF + + P+ VT T+
Sbjct: 443 ETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 502
Query: 349 LCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGL 408
+ FC+ G+ + A L+ E G PN YN LI + DG + E++K G
Sbjct: 503 MSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCG- 561
Query: 409 FPGKKTLSILADALCRDGKFEQ 430
F G + L + DG+ ++
Sbjct: 562 FAGDASTFGLVTNMLHDGRLDK 583
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 130/581 (22%), Positives = 243/581 (41%), Gaps = 47/581 (8%)
Query: 116 VDFLENYKKDRYYHQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNA 175
+DF + + R ++ + ++ + +PD+A+ L+ KM + + L+ Y++++L+
Sbjct: 91 IDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKC 150
Query: 176 LVEQGCFDAVAVVSKQISMRGFENDV-TRTIMLKCLCKQKKIDEAVEYFQQLVSGR--EC 232
+ +++ GF+ DV T +L LC + +I EA+ F +V E
Sbjct: 151 FCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEA 210
Query: 233 VSGF--MIGI-----------VVDALCKNSRFEQAGKLLEDFKDRD---DVVKLEKAYDV 276
V+ F M+ I +++ LC R +A L+ + DVV Y
Sbjct: 211 VALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV----TYGT 266
Query: 277 WLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEG 336
+ + + G AL L SK P+V ++ ++ RL K+ + LF +M E
Sbjct: 267 IVNGMCKMGDTKSALNLL-SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 337 QISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEA 396
I+P+ T N ++ FC G A L + E ++P+ + +N LI++ +G EA
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 397 YEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISA 456
++ + +FP T + + C+ +F+ K + ++ VT++ I
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDV----VTFNTIIDV 441
Query: 457 LCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPT 516
C+A +V+ G + E+SR VA+ TY LIHGF + + + A L EM +G P
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 517 RALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYE 576
++ C E + +Q+S + + YN I G + D A ++
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 577 LMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNG 636
+ G+ P + + YN +I G C + A +M+ NG
Sbjct: 562 SLPIHGVEPDV-------------------QTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Query: 637 MYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSF 677
P Y LI+ D + +++ + +G +F
Sbjct: 603 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 141/598 (23%), Positives = 237/598 (39%), Gaps = 62/598 (10%)
Query: 214 KKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRDDVVKLEKA 273
K +D+A+++F +V R + V+ + +R + A L + R + + +
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNI-YS 143
Query: 274 YDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDM 333
+++ ++ +L +L L G+ P+V FN L+ L E+R+ E LF M
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKL-GFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 334 KEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGST 393
E G ++ A+ L+ E GL+P I +N LIN LC +G
Sbjct: 203 VE-------------------TGFLE-AVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242
Query: 394 HEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKF 453
EA ++ + GL T + + +C+ G + +L+ E +IK V Y
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 302
Query: 454 ISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGH 513
I LCK + SE+ + TY +I GF R A RLL +M E
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362
Query: 514 KPTRALHRAVIRCLCNMETPAKQF-LQLLNMQLSHQE--TNFQIYNFFIDGAGHVKRPDL 570
P A+I K F + L ++ H+ + YN I G R D
Sbjct: 363 NPDVLTFNALISASVK---EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 571 ARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMR 630
A+ +++LM +V +NT+I C+A + + +R
Sbjct: 420 AKHMFDLMASPDVVT-----------------------FNTIIDVYCRAKRVDEGMQLLR 456
Query: 631 EMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTR 690
E+ G+ + Y LI C N + + + HG + N LL +
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 516
Query: 691 DLYEAWIRLRGMLINEQSKISL--LGQLIGVFSGC--IKVSQDIEGLQKMIEQCFPLDTY 746
L EA L + + SKI L + I + C KV + + + D
Sbjct: 517 KLEEA---LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 747 TYNILLRRL-SVSEIDHACELFNRMRRKGYEPDQWTFDILKCGLYNCLRTDEAERRLE 803
TYN+++ S I A LF++M+ G+EPD T++ L + CL+ E ++ +E
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL---IRGCLKAGEIDKSIE 628
Score = 70.1 bits (170), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 125/312 (40%), Gaps = 48/312 (15%)
Query: 125 DRYYHQVRFNDT-----LVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQ 179
D H+ F DT ++ G+ + D A H+F M D ++ +++
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRA 445
Query: 180 GCFDAVAVVSKQISMRGF-ENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMI 238
D + ++IS RG N T ++ C+ ++ A + FQ+++S C
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 239 GIVVDALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKN 298
I++ C+N + E+A +L E +++ ++DL
Sbjct: 506 NILLYGFCENEKLEEALELFE---------------------VIQMSKIDL--------- 535
Query: 299 SLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMV 358
+ +N ++ + K +++ E +DLF + + PD T N ++ FC +
Sbjct: 536 -------DTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAI 588
Query: 359 DVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSIL 418
A L+ + G P+ YN LI G ++ E++ +G T+ ++
Sbjct: 589 SDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV 648
Query: 419 ADALCRDGKFEQ 430
AD L DG+ ++
Sbjct: 649 AD-LITDGRLDK 659
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 124/517 (23%), Positives = 220/517 (42%), Gaps = 28/517 (5%)
Query: 137 LVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFD-AVAVVSKQISMR 195
L+ A K D+ + L KM+ G+ + Y Y++L+N + A+A++ K + +
Sbjct: 16 LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKL- 74
Query: 196 GFEND-VTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQA 254
G+E VT + +L C K+I +AV Q+V ++ L +++ +A
Sbjct: 75 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 134
Query: 255 GKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPE--VFRFNF 312
L++ R L Y V + L + G +DLA L N +E E V FN
Sbjct: 135 VALVDRMVQRGCQPNL-VTYGVVVNGLCKRGDIDLAFNLL---NKMEAAKIEADVVIFNT 190
Query: 313 LVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFG 372
++ L K + + +LF +M+ I P+ VT ++++ C G A +L E
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 373 LSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMK 432
++PN + +N LI++ +G EA ++ + I + P T + L + C + ++ K
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 310
Query: 433 DLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGF 492
+ F + ++ TY+ I CK+ +VE G + E+S V TY LI G
Sbjct: 311 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370
Query: 493 NKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNF 552
D A ++ +M +G P + ++ LCN K MQ S + +
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430
Query: 553 QIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTL 612
IY I+G + D ++ + G+ P + + YNT+
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT-------------------YNTM 471
Query: 613 IVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIK 649
I GLC A+ +++M+ +G P Y LI+
Sbjct: 472 ISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 508
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 176/391 (45%), Gaps = 3/391 (0%)
Query: 136 TLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMR 195
TL+ G L K A+ L +M +G + Y V++N L ++G D + ++
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 196 GFENDVTR-TIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQA 254
E DV ++ LCK + +D+A+ F+++ + + ++ LC R+ A
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 239
Query: 255 GKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLV 314
+LL D ++ L ++ + V+ G+ + E L P++F +N L+
Sbjct: 240 SQLLSDMIEKKINPNLV-TFNALIDAFVKEGKF-VEAEKLHDDMIKRSIDPDIFTYNSLI 297
Query: 315 SRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLS 374
+ +RL + +F M PD T NT++ FCK+ V+ EL++ S GL
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Query: 375 PNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDL 434
+ + Y LI L DG A +V K + G+ P T SIL D LC +GK E+ ++
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417
Query: 435 VIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNK 494
+ + IKL Y I +CKA KV+ G+ + LS + TY +I G
Sbjct: 418 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 477
Query: 495 SNRADIAARLLVEMEENGHKPTRALHRAVIR 525
A LL +M+E+G P + +IR
Sbjct: 478 KRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 508
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 121/575 (21%), Positives = 228/575 (39%), Gaps = 64/575 (11%)
Query: 167 YAYHVLLNALVEQGCFDAVAVVSKQISMRGFENDV-TRTIMLKCLCKQKKIDEAVEYFQQ 225
+ ++ LL+A+ + FD V + +++ G +++ T I++ C C++ +I A+ +
Sbjct: 11 FEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGK 70
Query: 226 LVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAG 285
++ S + +++ C R A L+ D +V++
Sbjct: 71 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV------DQMVEM--------------- 109
Query: 286 RLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTM 345
GY P+ F L+ L N+ E L M + P+ VT
Sbjct: 110 ----------------GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153
Query: 346 NTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSID 405
V+ CK G +D+A L + + +++N +I+SLC +A + K
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213
Query: 406 HGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEV 465
G+ P T S L LC G++ L+ +E+ I VT++ I A K K
Sbjct: 214 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 273
Query: 466 GYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIR 525
+H ++ + + TY LI+GF +R D A ++ M P + +I+
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333
Query: 526 CLCN---METPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSG 582
C +E + F ++ + L Y I G H D A+ V++ M G
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVT---YTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 583 LVPQLGSNILMLQS---------------YLKRKN-GIPRKLYNTLIVGLCKAMKANLAW 626
+ P + + ++L Y+++ + +Y T+I G+CKA K + W
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 450
Query: 627 GFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHA 686
+ G+ P++ Y +I LCS + ++ ++ G S NTL+
Sbjct: 451 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAH 510
Query: 687 LKTRDLYEAWIRLRGM----LINEQSKISLLGQLI 717
L+ D + +R M + + S I L+ ++
Sbjct: 511 LRDGDKAASAELIREMRSCRFVGDASTIGLVANML 545
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/504 (21%), Positives = 197/504 (39%), Gaps = 21/504 (4%)
Query: 304 VPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIE 363
+P +F FN L+S + K + V L M+ IS + T N ++ FC+ + +A+
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 364 LYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALC 423
L + G P+ + + L+N C +A ++ ++ G P T + L L
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 424 RDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASEN 483
K + LV ++R + VTY ++ LCK +++ + + +++ A
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 484 TYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNM 543
+ +I K D A L EME G +P + ++I CLC+ + L +M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 544 QLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNG 603
N +N ID + A +++ M + + P + +
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFT-------------- 292
Query: 604 IPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGV 663
YN+LI G C + + A M +P ++ Y LIK C +K + +
Sbjct: 293 -----YNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347
Query: 664 MNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINE-QSKISLLGQLIGVFSG 722
+ G + TL+ D A + M+ + I L+
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 407
Query: 723 CIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRL-SVSEIDHACELFNRMRRKGYEPDQWT 781
K+ + +E M + LD Y Y ++ + ++D +LF + KG +P+ T
Sbjct: 408 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 467
Query: 782 FDILKCGLYNCLRTDEAERRLEEM 805
++ + GL + EA L++M
Sbjct: 468 YNTMISGLCSKRLLQEAYALLKKM 491
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 136 bits (342), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 127/540 (23%), Positives = 225/540 (41%), Gaps = 50/540 (9%)
Query: 273 AYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFD-LFM 331
+D+ +++ R +D AL + + G++P V +N ++ ++ R + + +F
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLAQA-HGFMPGVLSYNAVLDATIRSKRNISFAENVFK 194
Query: 332 DMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDG 391
+M E Q+SP+ T N ++ FC AG +DVA+ L+ G PN + YN LI+ C
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR 254
Query: 392 STHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYD 451
+ +++L++ GL P + +++ + LCR+G+ +++ ++ R L +VTY+
Sbjct: 255 KIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYN 314
Query: 452 KFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEEN 511
I CK ++H+E+ R S TY LIH K+ + A L +M
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Query: 512 GHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLA 571
G P + ++ + + L M + + YN I+G + + A
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434
Query: 572 RAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMRE 631
AV E M+ GL P + S Y+T++ G C++ + A RE
Sbjct: 435 IAVLEDMKEKGLSPDVVS-------------------YSTVLSGFCRSYDVDEALRVKRE 475
Query: 632 MRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRD 691
M G+ P Y LI+ C + + + G F L+ D
Sbjct: 476 MVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 692 LYEAWIRLRGMLINEQSKISLLGQLIG---VFSGCIKVSQDIEG----LQKMIEQCFPLD 744
L +A L NE + +L ++ + +G K S+ E L+ E+ P D
Sbjct: 536 LEKAL-----QLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSD 590
Query: 745 TYTYNILLRRLS-------VSEIDHAC---------ELFNRMRRKGYEPDQWTFDILKCG 788
TY+ L+ S VS I C ++F M K ++PD ++I+ G
Sbjct: 591 V-TYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHG 649
Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 154/681 (22%), Positives = 277/681 (40%), Gaps = 80/681 (11%)
Query: 28 KIFQILS------THDDEDSASRFAADQALSELGIRLTESFALQVLNYGKKT--KDVLSC 79
K QIL+ T DDE ++ F + Q +L + F L V +Y + + LS
Sbjct: 97 KTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSI 156
Query: 80 LKFFDWAGRQPHFHHTRATFHAIFKLLHCAKLTPLMVDFLENYKKDRYYHQVRFN----D 135
+ G P A A + + + F EN K+ QV N +
Sbjct: 157 VHLAQAHGFMPGVLSYNAVLDATIR-------SKRNISFAENVFKEMLESQVSPNVFTYN 209
Query: 136 TLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMR 195
L+ G+ AG D+AL LF KM +G + Y+ L++ + D + + ++++
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269
Query: 196 GFE-NDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQA 254
G E N ++ +++ LC++ ++ E ++ + ++ CK F QA
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 255 GKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLV 314
+ + R + Y + ++ +AG ++ A+EFL + + G P + LV
Sbjct: 330 LVMHAEML-RHGLTPSVITYTSLIHSMCKAGNMNRAMEFL-DQMRVRGLCPNERTYTTLV 387
Query: 315 SRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLS 374
++ + E + + +M + SP VT N ++ C G ++ AI + + E GLS
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Query: 375 PNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDL 434
P+ + Y+ +++ C EA V + ++ G+ P T S L C + ++ DL
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 435 VIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNK 494
L + + TY I+A C +E +H+E+ + TY LI+G NK
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Query: 495 SNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQI 554
+R A RLL+++ P+ + +I N+E F ++++ I
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIE-----FKSVVSL----------I 612
Query: 555 YNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIV 614
F + G A V+E M LG N + +G YN +I
Sbjct: 613 KGFCMKGM-----MTEADQVFESM--------LGKN--------HKPDGTA---YNIMIH 648
Query: 615 GLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQV 674
G C+A A+ +EM +G L+K L H EG ++
Sbjct: 649 GHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKAL--------------HKEGKVNEL 694
Query: 675 TSFIGNTLLLHALKTRDLYEA 695
N++++H L++ +L EA
Sbjct: 695 -----NSVIVHVLRSCELSEA 710
Score = 110 bits (274), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 186/456 (40%), Gaps = 66/456 (14%)
Query: 358 VDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSI 417
+ A ++K E +SPN YN LI C G+ A + G P T +
Sbjct: 186 ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNT 245
Query: 418 LADALCR----DGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSEL 473
L D C+ D F+ ++ + + LE N+ ++Y+ I+ LC+ +++ + +E+
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNL----ISYNVVINGLCREGRMKEVSFVLTEM 301
Query: 474 SRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETP 533
+R E TY LI G+ K A + EM +G P+ + ++I +C
Sbjct: 302 NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCK---- 357
Query: 534 AKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILM 593
AG++ R A + M+ GL P
Sbjct: 358 ----------------------------AGNMNR---AMEFLDQMRVRGLCPN------- 379
Query: 594 LQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCS 653
+ Y TL+ G + N A+ +REM NG PS+ Y LI C
Sbjct: 380 ------------ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 654 TKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQSKISLL 713
T + + V+ ++ G +T+L ++ D+ EA +R++ ++ + K +
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA-LRVKREMVEKGIKPDTI 486
Query: 714 --GQLIGVFSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRLSV-SEIDHACELFNRM 770
LI F + + + ++M+ P D +TY L+ + +++ A +L N M
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 771 RRKGYEPDQWTFDILKCGLYNCLRTDEAERRLEEMF 806
KG PD T+ +L GL RT EA+R L ++F
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF 582
Score = 42.4 bits (98), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 110/265 (41%), Gaps = 30/265 (11%)
Query: 136 TLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMR 195
+L+ G+ + A L+ +M G+ D++ Y L+NA +G + + ++ +
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Query: 196 GFENDV-TRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQA 254
G DV T ++++ L KQ + EA +L S +++ C N F+
Sbjct: 550 GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSNIEFKSV 608
Query: 255 GKLLEDF------KDRDDVVK--LEK-------AYDVWLRNLVRAGRLDLALEFLKSKNS 299
L++ F + D V + L K AY++ + RAG + A K
Sbjct: 609 VSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVK 668
Query: 300 LEGYVPEVFRFNFLVSRLLKENRLMEVFDLFM------DMKEGQISPDGVTMNTVLCFFC 353
G++ LV L KE ++ E+ + + ++ E + + V +N
Sbjct: 669 -SGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINH------ 721
Query: 354 KAGMVDVAIELYKSRSEFGLSPNGI 378
+ G +DV +++ ++ G PNGI
Sbjct: 722 REGNMDVVLDVLAEMAKDGFLPNGI 746
>sp|O80958|PP194_ARATH Pentatricopeptide repeat-containing protein At2g39230,
mitochondrial OS=Arabidopsis thaliana GN=LOJ PE=1 SV=1
Length = 867
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 165/725 (22%), Positives = 302/725 (41%), Gaps = 76/725 (10%)
Query: 94 HTRATFHAIFKLLHCAKLTP-LMVD-FLENYKKDRYYHQVRFNDTLVMGYALAGKPDIAL 151
H RA+ + + + L P +MV+ +++ K+ + R + L+ Y + D A+
Sbjct: 130 HDRASNLLVMFVSNNPTLIPNVMVNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAV 189
Query: 152 HLFGKM-RFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRGFEND-VTRTIMLKC 209
FG M + + Y +VL ++LV D + ++ + G D VT ++++
Sbjct: 190 DCFGLMVDRKVVPFVPYVNNVL-SSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRA 248
Query: 210 LCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRDDVVK 269
+++K +EAV+ F++++S G + + V A CK A LL + + + V
Sbjct: 249 SLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPA 308
Query: 270 LEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGY-VP-EVFRFNFLVSRLLKENRLMEVF 327
++ Y + V+ G ++ A+ + + + G+ +P V LV+ K N L +
Sbjct: 309 SQETYTSVIVAFVKEGNMEEAVRVM---DEMVGFGIPMSVIAATSLVNGYCKGNELGKAL 365
Query: 328 DLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSL 387
DLF M+E ++PD V + ++ +FCK ++ AIE Y ++P+ ++ + +I
Sbjct: 366 DLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGC 425
Query: 388 CGDGSTHEAYEVLKNS----IDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNI 443
S A E+ +S I HG K L C+ GK + + ++ I
Sbjct: 426 LKAESPEAALEIFNDSFESWIAHGFMCNKIFL-----LFCKQGKVDAATSFLKMMEQKGI 480
Query: 444 KLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAAR 503
+ V Y+ + A C+ +++ I SE+ + TY LI GF K+ A
Sbjct: 481 EPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWD 540
Query: 504 LLVEMEENGHKPTRALHRAVIRCLCNM--ETPAKQFLQLLNMQLSHQETNFQIYNFFIDG 561
++ +M + + ++ +I LC + + AK+ LQ L ++ + YN IDG
Sbjct: 541 VINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNL-IKEKRYSMSCTSYNSIIDG 599
Query: 562 AGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMK 621
V D A Y M +G P + + + +LI G CK+ +
Sbjct: 600 FVKVGDTDSAVETYREMSENGKSPNVVT-------------------FTSLINGFCKSNR 640
Query: 622 ANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNT 681
+LA EM+ + + Y LI C K DM
Sbjct: 641 MDLALEMTHEMKSMELKLDLPAYGALIDGFC--KKNDM---------------------- 676
Query: 682 LLLHALKTRDLYEAWIRLRGMLINEQSKISLLGQLIGVFSGCIKVSQDIEGLQKMIEQCF 741
KT + + G++ N +S+ LI F K+ I+ +KM+
Sbjct: 677 ------KTAYTLFSELPELGLMPN----VSVYNSLISGFRNLGKMDAAIDLYKKMVNDGI 726
Query: 742 PLDTYTYNILLRR-LSVSEIDHACELFNRMRRKGYEPDQWTFDILKCGLYNCLRTDEAER 800
D +TY ++ L I+ A +L++ + G PD+ +L GL + +A +
Sbjct: 727 SCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASK 786
Query: 801 RLEEM 805
LEEM
Sbjct: 787 MLEEM 791
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/446 (21%), Positives = 183/446 (41%), Gaps = 11/446 (2%)
Query: 136 TLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMR 195
T++ G A P+ AL +F F+ + + + +QG DA K + +
Sbjct: 420 TMIQGCLKAESPEAALEIFND-SFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQK 478
Query: 196 GFE-NDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQA 254
G E N V M+ C+ K +D A F +++ + F I++D KN + A
Sbjct: 479 GIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNA 538
Query: 255 GKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLV 314
++ + + E Y+ + L + G+ A E L++ + Y +N ++
Sbjct: 539 WDVINQM-NASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSII 597
Query: 315 SRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLS 374
+K + + +M E SP+ VT +++ FCK+ +D+A+E+ L
Sbjct: 598 DGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELK 657
Query: 375 PNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDL 434
+ Y LI+ C AY + + GL P + L GK + DL
Sbjct: 658 LDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDL 717
Query: 435 VIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNK 494
+ I TY I L K + + ++SEL + V E ++ L++G +K
Sbjct: 718 YKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSK 777
Query: 495 SNRADIAARLLVEMEENGHKPTRALHRAVIRC---LCNMETPAKQFLQLLNMQLSHQETN 551
+ A+++L EM++ P L+ VI N+ + ++L + H +T
Sbjct: 778 KGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDT- 836
Query: 552 FQIYNFFIDGAGHVKRPDLARAVYEL 577
++N + +G V++P A + L
Sbjct: 837 --VFNLLV--SGRVEKPPAASKISSL 858
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 170/384 (44%), Gaps = 9/384 (2%)
Query: 142 ALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCF-DAVAVVSKQISMRGFEND 200
L+ +P A GKM G + D + LLN DA+A+ + + M N
Sbjct: 129 CLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNV 188
Query: 201 VTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLED 260
VT T +++CLCK + ++ AVE F Q+ + + +V LC+ R+ A LL D
Sbjct: 189 VTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRD 248
Query: 261 FKDR---DDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRL 317
R +V+ D + V+ G+L A E + Y P+VF + L++ L
Sbjct: 249 MMKRRIEPNVITFTALIDAF----VKVGKLMEAKELYNVMIQMSVY-PDVFTYGSLINGL 303
Query: 318 LKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNG 377
L E +F M+ P+ V T++ FCK+ V+ ++++ S+ G+ N
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 378 IVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIF 437
I Y LI C G A EV P +T ++L D LC +GK E+ + +
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEY 423
Query: 438 ALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNR 497
+R + + VTY I +CK KVE + + L + TY +I GF +
Sbjct: 424 MRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGL 483
Query: 498 ADIAARLLVEMEENGHKPTRALHR 521
A L +M+E+G P ++++
Sbjct: 484 IHEADSLFKKMKEDGFLPNESVYK 507
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 179/438 (40%), Gaps = 21/438 (4%)
Query: 215 KIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRDDVVKLEKAY 274
+ ++A++ F ++V R S ++ + K +R++ L E + + L
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILG-IPPLLCTC 121
Query: 275 DVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMK 334
++ + + + + A FL L G+ P++ F L++ NR+ + LF +
Sbjct: 122 NIVMHCVCLSSQPCRASCFLGKMMKL-GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQIL 180
Query: 335 EGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTH 394
P+ VT T++ CK ++ A+EL+ G PN + YN L+ LC G
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240
Query: 395 EAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFI 454
+A +L++ + + P T + L DA + GK + K+L ++ ++ TY I
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 455 SALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHK 514
+ LC ++ + + R +E Y LIHGF KS R + ++ EM + G
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 515 PTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAV 574
+ +I+ C + P M + + YN +DG + + A +
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420
Query: 575 YELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRH 634
+E M+ KR+ I Y +I G+CK K A+ +
Sbjct: 421 FEYMR-------------------KREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS 461
Query: 635 NGMYPSMECYEELIKLLC 652
GM P++ Y +I C
Sbjct: 462 KGMKPNVITYTTMISGFC 479
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/474 (22%), Positives = 190/474 (40%), Gaps = 43/474 (9%)
Query: 183 DAVAVVSKQISMRGFENDVTRTIMLKCLCKQKKIDEAVEYFQQL----VSGRECVSGFMI 238
DA+ + ++ + R + + T +L + K + D + F+Q+ + C
Sbjct: 66 DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN--- 122
Query: 239 GIVVDALCKNSRFEQA----GKLLEDFKDRDDVV--KLEKAYDVWLRNLVRAGRLDLALE 292
IV+ +C +S+ +A GK+++ + D V L Y W R++ A+
Sbjct: 123 -IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHW-------NRIEDAIA 174
Query: 293 FLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFF 352
+ G+ P V + L+ L K L +LF M P+ VT N ++
Sbjct: 175 LFDQILGM-GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGL 233
Query: 353 CKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGK 412
C+ G A L + + + PN I + LI++ G EA E+ I ++P
Sbjct: 234 CEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDV 293
Query: 413 KTLSILADALCRDGKFEQMKDLVIFALERN-IKLRDVTYDKFISALCKANKVEVGYLIHS 471
T L + LC G ++ + + + +ERN +V Y I CK+ +VE G I
Sbjct: 294 FTYGSLINGLCMYGLLDEARQM-FYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFY 352
Query: 472 ELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNME 531
E+S+ VA+ TY LI G+ R D+A + +M P + ++ LC
Sbjct: 353 EMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNG 412
Query: 532 TPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNI 591
K + M+ + N Y I G + + + A ++ + G+ P + +
Sbjct: 413 KVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVIT-- 470
Query: 592 LMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYE 645
Y T+I G C+ + A ++M+ +G P+ Y+
Sbjct: 471 -----------------YTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 111/264 (42%), Gaps = 3/264 (1%)
Query: 118 FLENYKKDRYYHQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALV 177
L + K R V L+ + GK A L+ M + D + Y L+N L
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLC 304
Query: 178 EQGCFDAVAVVSKQISMRG-FENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGF 236
G D + + G + N+V T ++ CK K++++ ++ F ++ +
Sbjct: 305 MYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTI 364
Query: 237 MIGIVVDALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKS 296
+++ C R + A ++ R + + Y+V L L G+++ AL +
Sbjct: 365 TYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDI-RTYNVLLDGLCCNGKVEKALMIFEY 423
Query: 297 KNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAG 356
E + + + ++ + K ++ + FDLF + + P+ +T T++ FC+ G
Sbjct: 424 MRKREMDI-NIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482
Query: 357 MVDVAIELYKSRSEFGLSPNGIVY 380
++ A L+K E G PN VY
Sbjct: 483 LIHEADSLFKKMKEDGFLPNESVY 506
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 131/343 (38%), Gaps = 58/343 (16%)
Query: 485 YIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQ 544
+ +L+ K NR D+ L +M+ G P V+ C+C P + L M
Sbjct: 86 FTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMM 145
Query: 545 LSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGI 604
E + + ++G H R + A A+++ + G P + +
Sbjct: 146 KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVT--------------- 190
Query: 605 PRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVM 664
Y TLI LCK N A +M NG P++ Y L+ LC + ++
Sbjct: 191 ----YTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 665 NHLEGHGRQVTSFIGNTLLLHA-------LKTRDLYEAWIRLR--------GMLINEQSK 709
+ R + I T L+ A ++ ++LY I++ G LIN
Sbjct: 247 RDMMKR-RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
Query: 710 ISLLGQLIGVF-----SGCI-----------------KVSQDIEGLQKMIEQCFPLDTYT 747
LL + +F +GC +V ++ +M ++ +T T
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 748 YNILLRRLS-VSEIDHACELFNRMRRKGYEPDQWTFDILKCGL 789
Y +L++ V D A E+FN+M + PD T+++L GL
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408
Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 81/189 (42%), Gaps = 4/189 (2%)
Query: 620 MKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIG 679
++ N A M H+ PS+ + L+ ++ YD+V+ + ++ G
Sbjct: 62 LQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTC 121
Query: 680 NTLLLHA--LKTRDLYEAWIRLRGMLINEQSKISLLGQLIGVFSGCIKVSQDIEGLQKMI 737
N +++H L ++ + + M + + + L+ + ++ I +++
Sbjct: 122 N-IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQIL 180
Query: 738 EQCFPLDTYTYNILLRRLSVS-EIDHACELFNRMRRKGYEPDQWTFDILKCGLYNCLRTD 796
F + TY L+R L + ++HA ELFN+M G P+ T++ L GL R
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240
Query: 797 EAERRLEEM 805
+A L +M
Sbjct: 241 DAAWLLRDM 249
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 142/536 (26%), Positives = 233/536 (43%), Gaps = 55/536 (10%)
Query: 305 PEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIEL 364
P VF +N L+ L K R+ + LF +M ++ P +T NT++ +CKAG + + ++
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271
Query: 365 YKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCR 424
+ + P+ I +N L+ L G +A VLK D G P T SIL D
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS 331
Query: 425 DGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENT 484
+ K E + A++ +K+ T ++ALCK K+E I V +E
Sbjct: 332 NEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVI 391
Query: 485 YIQLIHGFNKSNRAD-IAARLLVE-MEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLN 542
Y +I G+ + + D + AR+ +E ME+ G KP + +IR C + ++
Sbjct: 392 YNTMIDGYCR--KGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNK 449
Query: 543 MQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQL------------GSN 590
M+L + + YN I G G D + + M+ +G +P + GS
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 591 ILMLQSYLKR---KNGIPRK--LYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYE 645
+L Q +KR G+ K +YN LI G C K A+ F +EM G+ ++ Y
Sbjct: 510 LLEAQ-IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYN 568
Query: 646 ELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLL--------------LHALKTRD 691
LI L T ++ + G + F N+L+ L+ R
Sbjct: 569 TLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRS 628
Query: 692 LYEAWIRLRGMLINEQSK--ISLLGQLIG---------VFSG---CIKVSQDIE---GLQ 734
+ ++ +LI+ +K I L +L G V++G C V D+E LQ
Sbjct: 629 GIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQ 688
Query: 735 K-MIEQCFPLDTYTYN-ILLRRLSVSEIDHACELFNRMRRKGYEPDQWTFDILKCG 788
K MIE+ LD TYN ++L +L V ++ L + M + EP+ T++I+ G
Sbjct: 689 KQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKG 744
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 169/708 (23%), Positives = 291/708 (41%), Gaps = 91/708 (12%)
Query: 150 ALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRGFENDVTRTIML-- 207
A LF +R +G+ + +LL+ LV+ F V+ + + E+D + +
Sbjct: 128 AADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFR----VTINVFLNILESDFRPSKFMYG 183
Query: 208 ---KCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDR 264
+ K + + +E F ++ R S F+ +++D LCK R A +L ++ R
Sbjct: 184 KAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLAR 243
Query: 265 DDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLM 324
+ L Y+ + +AG + + + ++ + + P + FN L+ L K +
Sbjct: 244 RLLPSL-ITYNTLIDGYCKAGNPEKSFK-VRERMKADHIEPSLITFNTLLKGLFKAGMVE 301
Query: 325 EVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLI 384
+ ++ +MK+ PD T + + + + A+ +Y++ + G+ N + L+
Sbjct: 302 DAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILL 361
Query: 385 NSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALER-NI 443
N+LC +G +A E+L + GL P + + + D CR G + + I A+E+ +
Sbjct: 362 NALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR-MKIEAMEKQGM 420
Query: 444 KLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAAR 503
K + Y+ I C+ ++E +++ S TY LI G+ + D
Sbjct: 421 KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 480
Query: 504 LLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGA- 562
+L EME+NG P + +I CLC + + +M+ +IYN IDG
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCC 540
Query: 563 GHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKL--YNTLIVGLCKAM 620
K D R E++ K GI L YNTLI GL
Sbjct: 541 SKGKIEDAFRFSKEML----------------------KKGIELNLVTYNTLIDGLSMTG 578
Query: 621 KANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGN 680
K + A + E+ G+ P + Y LI N + + ++ G + T +
Sbjct: 579 KLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPT--LKT 636
Query: 681 TLLLHALKTRDLYEAWIRLRGMLINEQSKISLLGQLIGVFSG---CIKVSQDIE---GLQ 734
LL +L T++ E RL G ++SL L+ V++G C V D+E LQ
Sbjct: 637 YHLLISLCTKEGIELTERLFG-------EMSLKPDLL-VYNGVLHCYAVHGDMEKAFNLQ 688
Query: 735 K-MIEQCFPLDTYTYN-ILLRRLSV-------SEIDHA-------------------CEL 766
K MIE+ LD TYN ++L +L V S ID CE+
Sbjct: 689 KQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEV 748
Query: 767 ---------FNRMRRKGYEPDQWTFDILKCGLYNCLRTDEAERRLEEM 805
+ M+ KG+ D + L GL R+ EAE + EM
Sbjct: 749 KDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 126 bits (316), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 142/604 (23%), Positives = 255/604 (42%), Gaps = 42/604 (6%)
Query: 135 DTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISM 194
+TL+ GY AG P+ + + +M+ ++ ++ LL L + G + V K++
Sbjct: 253 NTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKD 312
Query: 195 RGFENDV-TRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQ 253
GF D T +I+ +K + A+ ++ V ++ + I+++ALCK + E+
Sbjct: 313 LGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEK 372
Query: 254 AGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFL 313
A ++L + +V E Y+ + R G L A +++ +G P+ +N L
Sbjct: 373 AEEILGREMAK-GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEK-QGMKPDHLAYNCL 430
Query: 314 VSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGL 373
+ R + + MK +SP T N ++ + + D ++ K + G
Sbjct: 431 IRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGT 490
Query: 374 SPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKD 433
PN + Y LIN LC EA V ++ D G+ P + ++L D C GK E
Sbjct: 491 MPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFR 550
Query: 434 LVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFN 493
L++ I+L VTY+ I L K+ + E+SR TY LI G+
Sbjct: 551 FSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYG 610
Query: 494 KSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQ 553
+ L EM+ +G KPT + +I LC E + + L ++S + +
Sbjct: 611 FAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKE--GIELTERLFGEMSLK-PDLL 666
Query: 554 IYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKN-GIPRKLYNTL 612
+YN G H AV+ M+++ LQ + K+ G+ + YN+L
Sbjct: 667 VYN----GVLH------CYAVHGDMEKA----------FNLQKQMIEKSIGLDKTTYNSL 706
Query: 613 IVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGR 672
I+G K K + EM M P + Y ++K C K+Y ++ G
Sbjct: 707 ILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGF 766
Query: 673 QVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQSKISLLGQLIGVFSGCIKVSQDIEG 732
+ IGN L+ L E W +++++I ++ ++ G G + V +D+
Sbjct: 767 LLDVCIGNELV------SGLKEEW-------RSKEAEI-VISEMNGRMLGDVTVDEDLSA 812
Query: 733 LQKM 736
+K+
Sbjct: 813 TEKL 816
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 193/394 (48%), Gaps = 9/394 (2%)
Query: 135 DTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFD-AVAVVSKQIS 193
+ L+ G+ + D A + +MR + D Y++++ +L +G D A+ V+++ +S
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221
Query: 194 MRGFENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQ 253
+T TI+++ + +DEA++ +++S F ++ +CK ++
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 281
Query: 254 AGKLLEDFKDR---DDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRF 310
A +++ + + + DV+ +Y++ LR L+ G+ + E L +K E P V +
Sbjct: 282 AFEMVRNLELKGCEPDVI----SYNILLRALLNQGKWEEG-EKLMTKMFSEKCDPNVVTY 336
Query: 311 NFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSE 370
+ L++ L ++ ++ E +L MKE ++PD + + ++ FC+ G +DVAIE ++
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 371 FGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQ 430
G P+ + YN ++ +LC +G +A E+ + G P + + + AL G +
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 431 MKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIH 490
+++ + I ++TY+ IS LC+ V+ + + ++ S TY ++
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516
Query: 491 GFNKSNRADIAARLLVEMEENGHKPTRALHRAVI 524
GF K++R + A +L M NG +P + +I
Sbjct: 517 GFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 173/357 (48%), Gaps = 4/357 (1%)
Query: 137 LVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRG 196
L+ L G D AL L +M +G+ D + Y+ ++ + ++G D + + + ++G
Sbjct: 234 LIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG 293
Query: 197 FENDV-TRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAG 255
E DV + I+L+ L Q K +E + ++ S + + I++ LC++ + E+A
Sbjct: 294 CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAM 353
Query: 256 KLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVS 315
LL+ K++ + +YD + R GRLD+A+EFL++ S +G +P++ +N +++
Sbjct: 354 NLLKLMKEKG-LTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS-DGCLPDIVNYNTVLA 411
Query: 316 RLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSP 375
L K + + ++F + E SP+ + NT+ +G A+ + G+ P
Sbjct: 412 TLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP 471
Query: 376 NGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLV 435
+ I YN +I+ LC +G EA+E+L + P T +I+ C+ + E +++
Sbjct: 472 DEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVL 531
Query: 436 IFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGF 492
+ + + TY I + A + ++L R++ + SE ++ +L F
Sbjct: 532 ESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAI-SEYSFKRLHRTF 587
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 109/470 (23%), Positives = 185/470 (39%), Gaps = 75/470 (15%)
Query: 246 CKNSRFEQAGKLLEDFKDR---DDVV---KLEKAYDVWLRNLVRAGRLDLALEFLKSKNS 299
C++ + ++ LLE + DV+ KL K + LRN+ +A R+ LE
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGF-FTLRNIPKAVRVMEILEKFGQ--- 155
Query: 300 LEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVD 359
P+VF +N L++ K NR+ + + M+ SPD VT N ++ C G +D
Sbjct: 156 -----PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD 210
Query: 360 VAI--------------------------------ELYKSRSEF---GLSPNGIVYNYLI 384
+A+ E K E GL P+ YN +I
Sbjct: 211 LALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Query: 385 NSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIK 444
+C +G A+E+++N G P + +IL AL GK+E+ + L+
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD 330
Query: 445 LRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARL 504
VTY I+ LC+ K+E + + +Y LI F + R D+A
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 505 LVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLN-MQLSHQETNFQIYNFFIDGAG 563
L M +G P + V+ LC A Q L++ + N YN +
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCK-NGKADQALEIFGKLGEVGCSPNSSSYNTMF--SA 447
Query: 564 HVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGI-PRKL-YNTLIVGLCKAMK 621
D RA++ +++ NGI P ++ YN++I LC+
Sbjct: 448 LWSSGDKIRALHMILE-------------------MMSNGIDPDEITYNSMISCLCREGM 488
Query: 622 ANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHG 671
+ A+ + +MR +PS+ Y ++ C + + V+ + G+G
Sbjct: 489 VDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 103/478 (21%), Positives = 176/478 (36%), Gaps = 26/478 (5%)
Query: 316 RLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSP 375
R + +E L M +PD + ++ F + A+ + + +FG P
Sbjct: 98 RSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QP 156
Query: 376 NGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLV 435
+ YN LIN C +A VL P T +I+ +LC GK + ++
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 436 IFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKS 495
L N + +TY I A V+ + E+ TY +I G K
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 496 NRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQ-ETNFQI 554
D A ++ +E G +P + ++R L N + ++ +L+ S + + N
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLN-QGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 555 YNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIV 614
Y+ I + + A + +LM+ GL P S Y+ LI
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS-------------------YDPLIA 376
Query: 615 GLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQV 674
C+ + ++A F+ M +G P + Y ++ LC D + + L G
Sbjct: 377 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436
Query: 675 TSFIGNTLLLHALKTRDLYEAWIRLRGMLIN--EQSKISLLGQLIGVFSGCIKVSQDIEG 732
S NT+ + D A + M+ N + +I+ +I V + E
Sbjct: 437 NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEIT-YNSMISCLCREGMVDEAFEL 495
Query: 733 LQKMIEQCFPLDTYTYNI-LLRRLSVSEIDHACELFNRMRRKGYEPDQWTFDILKCGL 789
L M F TYNI LL I+ A + M G P++ T+ +L G+
Sbjct: 496 LVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 99/242 (40%), Gaps = 16/242 (6%)
Query: 58 LTESFALQVLNYGKKTKDVLSCLKFFDWAGRQPHFHHTRATFHAIFKLLHCAKLTPLMVD 117
+T S + L K ++ ++ LK G P + A + + ++
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCR----EGRLDVAIE 389
Query: 118 FLENYKKDRYYHQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALV 177
FLE D + +T++ GK D AL +FGK+ G + +Y+ + +AL
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 178 EQGCFDAVAVVSKQISM--RGFEND-VTRTIMLKCLCKQKKIDEAVEYFQQLVSGREC-- 232
G D + + + M G + D +T M+ CLC++ +DEA F+ LV R C
Sbjct: 450 SSG--DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEA---FELLVDMRSCEF 504
Query: 233 -VSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLAL 291
S IV+ CK R E A +LE + E Y V + + AG A+
Sbjct: 505 HPSVVTYNIVLLGFCKAHRIEDAINVLESMVG-NGCRPNETTYTVLIEGIGFAGYRAEAM 563
Query: 292 EF 293
E
Sbjct: 564 EL 565
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 125/315 (39%), Gaps = 33/315 (10%)
Query: 485 YIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQ 544
Y LI+GF K NR D A R+L M P + +I LC+ L++LN
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS-RGKLDLALKVLNQL 219
Query: 545 LSHQ-ETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNG 603
LS + Y I+ D A + + M GL P + +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT-------------- 265
Query: 604 IPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGV 663
YNT+I G+CK + A+ +R + G P + Y L++ L + ++ +
Sbjct: 266 -----YNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKL 320
Query: 664 MNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAW-----IRLRGMLINEQSKISLLGQLIG 718
M + + L+ + + EA ++ +G+ + S LI
Sbjct: 321 MTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS----YDPLIA 376
Query: 719 VFSGCIKVSQDIEGLQKMI-EQCFPLDTYTYNILLRRLSVS-EIDHACELFNRMRRKGYE 776
F ++ IE L+ MI + C P D YN +L L + + D A E+F ++ G
Sbjct: 377 AFCREGRLDVAIEFLETMISDGCLP-DIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 435
Query: 777 PDQWTFDILKCGLYN 791
P+ +++ + L++
Sbjct: 436 PNSSSYNTMFSALWS 450
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 35/199 (17%)
Query: 609 YNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLE 668
YN LI G CK + + A + MR P Y +I LCS D+ + V+N L
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 669 GHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQSKISLLGQLIGVFSGCIKVSQ 728
Q T I T+L+ A L G V +
Sbjct: 221 SDNCQPT-VITYTILIEA----------TMLEG-----------------------GVDE 246
Query: 729 DIEGLQKMIEQCFPLDTYTYNILLRRL-SVSEIDHACELFNRMRRKGYEPDQWTFDILKC 787
++ + +M+ + D +TYN ++R + +D A E+ + KG EPD +++IL
Sbjct: 247 ALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLR 306
Query: 788 GLYNCLRTDEAERRLEEMF 806
L N + +E E+ + +MF
Sbjct: 307 ALLNQGKWEEGEKLMTKMF 325
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 133/340 (39%), Gaps = 55/340 (16%)
Query: 487 QLIHGFNKSNRADI---AARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNM 543
Q++ F++S R+ + LL M G+ P L +I+ + K ++++ +
Sbjct: 91 QMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKA-VRVMEI 149
Query: 544 QLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKR-KN 602
+ + YN I+G + R D A V + M+ P + +M+ S R K
Sbjct: 150 LEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKL 209
Query: 603 GIPRKLYNTLIVGLCKA--------MKANLAWG-------FMREMRHNGMYPSMECYEEL 647
+ K+ N L+ C+ ++A + G M EM G+ P M Y +
Sbjct: 210 DLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTI 269
Query: 648 IKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQ 707
I+ +C D ++ +LE G + I +LL AL + +E +L
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGCE-PDVISYNILLRALLNQGKWEEGEKL-------- 320
Query: 708 SKISLLGQLIGVFSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRLSV-SEIDHACEL 766
+ +FS E+C P + TY+IL+ L +I+ A L
Sbjct: 321 --------MTKMFS----------------EKCDP-NVVTYSILITTLCRDGKIEEAMNL 355
Query: 767 FNRMRRKGYEPDQWTFDILKCGLYNCLRTDEAERRLEEMF 806
M+ KG PD +++D L R D A LE M
Sbjct: 356 LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/478 (22%), Positives = 207/478 (43%), Gaps = 4/478 (0%)
Query: 130 QVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVS 189
+ R + ++ Y + ++++ F +M G ++ LL +V F+
Sbjct: 93 KFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFF 152
Query: 190 KQISMRGFENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNS 249
+ + + + I++K C+ +I+++ + +L + + ++D CK
Sbjct: 153 NENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKG 212
Query: 250 RFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFR 309
E+A L + + +V E+ Y V + L + G E + K +G P ++
Sbjct: 213 EIEKAKDLFFEM-GKLGLVANERTYTVLINGLFKNGVKKQGFE-MYEKMQEDGVFPNLYT 270
Query: 310 FNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRS 369
+N ++++L K+ R + F +F +M+E +S + VT NT++ C+ ++ A ++
Sbjct: 271 YNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK 330
Query: 370 EFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFE 429
G++PN I YN LI+ CG G +A + ++ GL P T +IL CR G
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS 390
Query: 430 QMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLI 489
+V ER IK VTY I +++ +E + + + V +TY LI
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450
Query: 490 HGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQE 549
HGF + + A+RL M E +P ++ +I C + + L M+
Sbjct: 451 HGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELA 510
Query: 550 TNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRK 607
N Y + I+ ++ A + E M SG+ P ++IL L S K + + K
Sbjct: 511 PNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS--TSILSLISRAKNDSHVSSK 566
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 189/453 (41%), Gaps = 32/453 (7%)
Query: 205 IMLKCLCKQKKIDEAVEYFQQLV-----SGRECVSGFMIGIVVDALCKNSRFEQAGKLLE 259
+++ + + ++ ++ YF ++V G C + +++ VV + S F Q
Sbjct: 99 VIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFN-YLLTFVVGS----SSFNQWWSFFN 153
Query: 260 DFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLK 319
+ K + VV ++ + ++ AG ++ + + L G+ P V + L+ K
Sbjct: 154 ENKSK--VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEF-GFSPNVVIYTTLIDGCCK 210
Query: 320 ENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIV 379
+ + + DLF +M + + + T ++ K G+ E+Y+ E G+ PN
Sbjct: 211 KGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYT 270
Query: 380 YNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFAL 439
YN ++N LC DG T +A++V + G+ T + L LCR+ K + +V
Sbjct: 271 YNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK 330
Query: 440 ERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRAD 499
I +TY+ I C K+ + +L S TY L+ GF +
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS 390
Query: 500 IAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFI 559
AA+++ EMEE G KP++ + +I + K L+M+ + Y+ I
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450
Query: 560 DGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKA 619
G + + A +++ M P +YNT+I+G CK
Sbjct: 451 HGFCIKGQMNEASRLFKSMVEKNCEPN-------------------EVIYNTMILGYCKE 491
Query: 620 MKANLAWGFMREMRHNGMYPSMECYEELIKLLC 652
+ A ++EM + P++ Y +I++LC
Sbjct: 492 GSSYRALKLLKEMEEKELAPNVASYRYMIEVLC 524
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 103/462 (22%), Positives = 179/462 (38%), Gaps = 38/462 (8%)
Query: 351 FFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFP 410
FF + ++ E S+++F L Y +INS S + + +D+G P
Sbjct: 74 FFTSSSLLHYLTESETSKTKFRL------YEVIINSYVQSQSLNLSISYFNEMVDNGFVP 127
Query: 411 GKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDV-TYDKFISALCKANKVEVGYLI 469
G + L + F Q F ++ + DV ++ I C+A ++E + +
Sbjct: 128 GSNCFNYLLTFVVGSSSFNQWWSF--FNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDL 185
Query: 470 HSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCN 529
EL+ + Y LI G K + A L EM + G + +I L
Sbjct: 186 LIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK 245
Query: 530 METPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGS 589
+ F MQ N YN ++ R A V++ M+ G+
Sbjct: 246 NGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGV----SC 301
Query: 590 NILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIK 649
NI+ YNTLI GLC+ MK N A + +M+ +G+ P++ Y LI
Sbjct: 302 NIVT---------------YNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLID 346
Query: 650 LLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAW-----IRLRGMLI 704
C + + L+ G + N L+ + D A + RG+
Sbjct: 347 GFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI-- 404
Query: 705 NEQSKISLLGQLIGVFSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRLSV-SEIDHA 763
+ SK++ LI F+ + + I+ M E D +TY++L+ + +++ A
Sbjct: 405 -KPSKVTYT-ILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEA 462
Query: 764 CELFNRMRRKGYEPDQWTFDILKCGLYNCLRTDEAERRLEEM 805
LF M K EP++ ++ + G + A + L+EM
Sbjct: 463 SRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEM 504
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 132 bits (333), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 173/804 (21%), Positives = 298/804 (37%), Gaps = 147/804 (18%)
Query: 57 RLTESFALQVLNYGKKTKDVLSCLKFFDWAGRQPHFHHTRATFHAIFKLLHCAKLTPLMV 116
+L+ES ++VL + V+S FF WAGRQ + HT ++A L L+V
Sbjct: 129 KLSESLVIEVLRLIARPSAVIS---FFVWAGRQIGYKHTAPVYNA---------LVDLIV 176
Query: 117 DFLENYKKDRYYHQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNAL 176
+ + + Q+R +D +FG+ LN L
Sbjct: 177 RDDDEKVPEEFLQQIRDDDK---------------EVFGE---------------FLNVL 206
Query: 177 VEQGCFD-----AVAVVSKQISMRGFENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRE 231
V + C + A+ + + R + T +++ K ++D A +++
Sbjct: 207 VRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANL 266
Query: 232 CVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLAL 291
+ GF + +LCK ++ +A L+E
Sbjct: 267 RMDGFTLRCFAYSLCKVGKWREALTLVET------------------------------- 295
Query: 292 EFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCF 351
E +VP+ + L+S L + + E D M+ P+ VT +T+LC
Sbjct: 296 ---------ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCG 346
Query: 352 FCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPG 411
+ + G P+ ++N L+++ C G AY++LK + G PG
Sbjct: 347 CLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPG 406
Query: 412 KKTLSILADALCRD-----------------------------------------GKFEQ 430
+IL ++C D GK+E+
Sbjct: 407 YVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEK 466
Query: 431 MKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIH 490
++ + + TY K ++ LC A+K+E+ +L+ E+ R VA TY ++
Sbjct: 467 AFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVD 526
Query: 491 GFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQET 550
F K+ + A + EM E G P + A+I + + M
Sbjct: 527 SFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 586
Query: 551 NFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYN 610
N Y+ IDG + + A ++E M S VP + +R N + Y
Sbjct: 587 NIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVT---YG 643
Query: 611 TLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGH 670
L+ G CK+ + A + M G P+ Y+ LI LC D V + H
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH 703
Query: 671 GRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINE-QSKISLLGQLIGVFSGCIKVSQD 729
G T + ++L+ K + A L ML N + + ++I G KV +
Sbjct: 704 GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMI---DGLCKVGKT 760
Query: 730 IEG--LQKMIEQ--CFPLDTYTYNILLRRLS-VSEIDHACELFNRMRRKGYEPDQWTFDI 784
E L +M+E+ C P + TY ++ + +I+ EL RM KG P+ T+ +
Sbjct: 761 DEAYKLMQMMEEKGCQP-NVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV 819
Query: 785 LKCGLYNCLRT---DEAERRLEEM 805
L + +C + D A LEEM
Sbjct: 820 L---IDHCCKNGALDVAHNLLEEM 840
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 147/689 (21%), Positives = 267/689 (38%), Gaps = 102/689 (14%)
Query: 128 YHQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFD---- 183
Y + ++LV Y +G A L KM G +V+ N L+ C D
Sbjct: 369 YPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCG----HMPGYVVYNILIGSICGDKDSL 424
Query: 184 -------AVAVVSKQISMRGFENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGF 236
A S+ ++ N + + +CLC K ++A ++++
Sbjct: 425 NCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTS 484
Query: 237 MIGIVVDALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKS 296
V++ LC S+ E A L E+ K R +V Y + + + +AG ++ A ++
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMK-RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE 543
Query: 297 KNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAG 356
+ G P V + L+ LK ++ +LF M P+ VT + ++ CKAG
Sbjct: 544 MREV-GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAG 602
Query: 357 MVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLS 416
V+ A ++++ +CG + K D+ P T
Sbjct: 603 QVEKACQIFER-------------------MCGSKDVPDVDMYFKQYDDNSERPNVVTYG 643
Query: 417 ILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRM 476
L D C+ + E+ + L+ + + YD I LCK K++ + +E+S
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH 703
Query: 477 NKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQ 536
A+ TY LI + K R D+A+++L +M EN P ++ +I LC + +
Sbjct: 704 GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA 763
Query: 537 FLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQS 596
+ + M+ + N Y IDG G + + + + E M G+ P +
Sbjct: 764 YKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT------- 816
Query: 597 YLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKN 656
Y LI CK ++A + EM+ +P+ T
Sbjct: 817 ------------YRVLIDHCCKNGALDVAHNLLEEMKQTH-WPT------------HTAG 851
Query: 657 YDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQSKISLLGQL 716
Y V+ EG ++ FI + LL + D ++ + +LI+ K
Sbjct: 852 YRKVI------EGFNKE---FIESLGLLDEIGQDDT-APFLSVYRLLIDNLIK------- 894
Query: 717 IGVFSGCIKVSQDIEGLQKMIEQCFPLD------TYTYNILLRRLSVS-EIDHACELFNR 769
+Q +E +++E+ + TYN L+ L ++ +++ A +LF+
Sbjct: 895 ----------AQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSE 944
Query: 770 MRRKGYEPDQWTFDILKCGLYNCLRTDEA 798
M +KG P+ +F L GL+ + EA
Sbjct: 945 MTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 107/501 (21%), Positives = 186/501 (37%), Gaps = 89/501 (17%)
Query: 92 FHHTRATFHAIFKLLHCAKLTPLMVDFLENYKKDRYYHQVRFNDTLVMGYALAGKPDIAL 151
F +T+ + L A L E K+ V +V + AG + A
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538
Query: 152 HLFGKMRFQGMDLDDYAYHVLLNA----------------LVEQGCFDAVAVVSKQISMR 195
F +MR G + Y L++A ++ +GC + S I
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 196 GFENDVTRTI-MLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQA 254
V + + + +C K + + YF+Q E + G ++D CK+ R E+A
Sbjct: 599 CKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 658
Query: 255 GKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLV 314
KLL D + + YD + L + G+LD A E +K++ S G+ ++ ++ L+
Sbjct: 659 RKLL-DAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE-VKTEMSEHGFPATLYTYSSLI 716
Query: 315 SR-----------------------------------LLKENRLMEVFDLFMDMKEGQIS 339
R L K + E + L M+E
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776
Query: 340 PDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEV 399
P+ VT ++ F G ++ +EL + G++PN + Y LI+ C +G+ A+ +
Sbjct: 777 PNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 836
Query: 400 L-----------------------KNSIDH-GLF---------PGKKTLSILADALCRDG 426
L K I+ GL P +L D L +
Sbjct: 837 LEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQ 896
Query: 427 KFEQMKDLVIFALERNIKLRDV--TYDKFISALCKANKVEVGYLIHSELSRMNKVASENT 484
+ E L+ + L D TY+ I +LC ANKVE + + SE+++ + +
Sbjct: 897 RLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQS 956
Query: 485 YIQLIHGFNKSNRADIAARLL 505
+ LI G ++++ A LL
Sbjct: 957 FCSLIKGLFRNSKISEALLLL 977
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/513 (23%), Positives = 220/513 (42%), Gaps = 36/513 (7%)
Query: 135 DTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFD-AVAVVSKQIS 193
+ L+ A K D+ + L KM+ G+ + Y Y++L+N + A+A++ K +
Sbjct: 89 NKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 194 MRGFEND-VTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFE 252
+ G+E VT + +L C K+I +AV Q+V ++ L +++
Sbjct: 149 L-GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 253 QAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPE--VFRF 310
+A L++ R L Y V + L + G +DLA L N +E E V +
Sbjct: 208 EAVALVDRMVQRGCQPNL-VTYGVVVNGLCKRGDIDLAFNLL---NKMEAAKIEANVVIY 263
Query: 311 NFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSE 370
+ ++ L K + +LF +M+ + P+ +T ++++ C A L E
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323
Query: 371 FGLSPNGIVYNYLINSLCGDGSTHEAY----EVLKNSIDHGLFPGKKTLSILADALCRDG 426
++PN + +N LI++ +G EA E++K SID +F T S L + C
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF----TYSSLINGFCMHD 379
Query: 427 KFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYI 486
+ ++ K + + ++ VTY+ I+ CKA +++ G + E+S+ V + TY
Sbjct: 380 RLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYT 439
Query: 487 QLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLS 546
LIHGF ++ D A + +M +G P + ++ LC K + +Q S
Sbjct: 440 TLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 499
Query: 547 HQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPR 606
E YN I+G + + ++ + G+ P +
Sbjct: 500 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDV------------------- 540
Query: 607 KLYNTLIVGLCKAMKANLAWGFMREMRHNGMYP 639
+YNT+I G C+ A R+MR +G P
Sbjct: 541 IIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Score = 112 bits (281), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 126/555 (22%), Positives = 218/555 (39%), Gaps = 64/555 (11%)
Query: 274 YDVWLRNLVRAGRLDLALEF----LKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDL 329
Y LRN + + +LD A+ +KS+ +P +F FN L+S + K + V L
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRP-----LPSIFEFNKLLSAIAKMKKFDLVISL 107
Query: 330 FMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCG 389
M+ IS + T N ++ FC+ + +A+ L + G P+ + + L+N C
Sbjct: 108 GEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH 167
Query: 390 DGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVT 449
+A ++ ++ G P T + L L K + LV ++R + VT
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 450 YDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEME 509
Y ++ LCK +++ + + +++ A+ Y +I K D A L EME
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 510 ENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPD 569
G +P + ++I CLCN E + L +M N +N ID VK
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID--AFVKEGK 345
Query: 570 LARA--VYELMQRSGLVPQLGSNILMLQSY---------------LKRKNGIPRKL-YNT 611
L A +Y+ M + + P + + ++ + + K+ P + YNT
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 612 LIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHG 671
LI G CKA + + REM G+ + Y LI ++ D V + G
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 672 RQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQSKISLLGQLIGVFSGCIKVSQDIE 731
NTLL K L +A M++ E + S + I
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKA------MVVFEYLQRSKMEPTI-------------- 505
Query: 732 GLQKMIEQCFPLDTYTYNILLRRL-SVSEIDHACELFNRMRRKGYEPDQWTFDILKCGLY 790
YTYNI++ + +++ +LF + KG +PD ++ + G
Sbjct: 506 --------------YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFC 551
Query: 791 NCLRTDEAERRLEEM 805
+EA+ +M
Sbjct: 552 RKGLKEEADALFRKM 566
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 109/522 (20%), Positives = 190/522 (36%), Gaps = 64/522 (12%)
Query: 170 HVLLNALVEQGCFDAVAVVSKQISMRGFENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSG 229
+L N L DA+ + + R + +L + K KK D + +++
Sbjct: 55 EILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114
Query: 230 RECVSGFMIGIVVDALCKNSRFEQA----GKLLEDFKDRDDVVKLEKAYDVWLRNLVRAG 285
+ + I+++ C+ S+ A GK+++ +V L L
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMK-LGYEPSIVTLSS----LLNGYCHGK 169
Query: 286 RLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTM 345
R+ A+ + + GY P+ F L+ L N+ E L M + P+ VT
Sbjct: 170 RISDAVALVDQMVEM-GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 346 NTVLCFFCKAGMVDV-----------------------------------AIELYKSRSE 370
V+ CK G +D+ A+ L+
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 371 FGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQ 430
G+ PN I Y+ LI+ LC +A +L + I+ + P T + L DA ++GK +
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE 348
Query: 431 MKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIH 490
+ L ++R+I TY I+ C ++++ + + + + TY LI+
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIN 408
Query: 491 GFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQET 550
GF K+ R D L EM + G + +I + M
Sbjct: 409 GFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 468
Query: 551 NFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYN 610
N YN +DG + + A V+E +QRS + P + + YN
Sbjct: 469 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT-------------------YN 509
Query: 611 TLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLC 652
+I G+CKA K W + G+ P + Y +I C
Sbjct: 510 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFC 551
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/541 (22%), Positives = 230/541 (42%), Gaps = 29/541 (5%)
Query: 140 GYALAGKPDIALHLFGKMRFQGMDLDDY-------AYHVLLNALVEQGCFDAVA-----V 187
Y A PD A+ LF +M +D++ +++ +LN ++ +G + V
Sbjct: 121 AYGKAHLPDKAVDLFHRM------VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYV 174
Query: 188 VSKQISMRGFENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCK 247
V+ ++M N ++ +++K LCK + +D A+E F+ + + G+ ++D LCK
Sbjct: 175 VNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCK 234
Query: 248 NSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEV 307
R ++A LL++ + + Y+V + L + G L + + + L+G VP
Sbjct: 235 EERIDEAVLLLDEMQS-EGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM-FLKGCVPNE 292
Query: 308 FRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKS 367
+N L+ L + +L + L M + P+ VT T++ K A+ L S
Sbjct: 293 VTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSS 352
Query: 368 RSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGK 427
E G N +Y+ LI+ L +G EA + + + G P S+L D LCR+GK
Sbjct: 353 MEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGK 412
Query: 428 FEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQ 487
+ K+++ + TY + K E + E+ + ++ Y
Sbjct: 413 PNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSV 472
Query: 488 LIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLC---NMETPAKQFLQLLNMQ 544
LI G R A + +M G KP + ++I+ LC +M+ K + ++L +
Sbjct: 473 LIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQE 532
Query: 545 LSHQETNFQIYNFFIDGAGHVKRPDLARAVYEL--MQRSGLVPQLGSNILMLQSYLKRKN 602
+ + YN +DG K D++RAV L M G P + + L + ++ N
Sbjct: 533 EPKSQPDVVTYNILLDGLCMQK--DISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSN 590
Query: 603 GIP--RKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMV 660
R L+V L K + + A + M + P + +++ +C K +
Sbjct: 591 SCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAA 650
Query: 661 V 661
+
Sbjct: 651 I 651
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 125/553 (22%), Positives = 213/553 (38%), Gaps = 75/553 (13%)
Query: 256 KLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEF---LKSKNSLEGYVPEVFRFNF 312
+++++F+ + V K+++ L ++ G LEF + + N P FN
Sbjct: 137 RMVDEFRCKRSV----KSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNL 192
Query: 313 LVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFG 372
++ L K + ++F M E + PDG T T++ CK +D A+ L G
Sbjct: 193 VIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG 252
Query: 373 LSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMK 432
SP+ ++YN LI+ LC G +++ N G P + T + L LC GK ++
Sbjct: 253 CSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAV 312
Query: 433 DLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGF 492
L+ ++ +S+ C N V TY LI+G
Sbjct: 313 SLL---------------ERMVSSKCIPNDV--------------------TYGTLINGL 337
Query: 493 NKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLL-NMQLSHQETN 551
K RA A RLL MEE G+ + ++ +I L E A++ + L M + N
Sbjct: 338 VKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFK-EGKAEEAMSLWRKMAEKGCKPN 396
Query: 552 FQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKR----------- 600
+Y+ +DG +P+ A+ + M SG +P + +++ + K
Sbjct: 397 IVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWK 456
Query: 601 ---KNGIPRK--LYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTK 655
K G R Y+ LI GLC + A +M G+ P Y +IK LC
Sbjct: 457 EMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIG 516
Query: 656 NYDMVVGVMNHL---EGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQSKISL 712
+ D + + + + E Q N LL +D+ A L ML
Sbjct: 517 SMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDR------- 569
Query: 713 LGQLIGVFSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRLSVSEIDHACELFNRMRR 772
G I + + L + C ++ +++R L + AC + M
Sbjct: 570 -----GCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLG 624
Query: 773 KGYEPDQWTFDIL 785
K P T+ ++
Sbjct: 625 KYLAPKTSTWAMI 637
Score = 83.2 bits (204), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 151/325 (46%), Gaps = 18/325 (5%)
Query: 129 HQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQ-GCFDAVAV 187
++V +N TL+ G L GK D A+ L +M +D Y L+N LV+Q DAV +
Sbjct: 291 NEVTYN-TLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRL 349
Query: 188 VSKQISMRGFE-NDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMI-GIVVDAL 245
+S + RG+ N ++++ L K+ K +EA+ ++++ + C ++ ++VD L
Sbjct: 350 LS-SMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAE-KGCKPNIVVYSVLVDGL 407
Query: 246 CKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVP 305
C+ + +A ++L + Y ++ + G + A++ K + G
Sbjct: 408 CREGKPNEAKEILNRMI-ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDK-TGCSR 465
Query: 306 EVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELY 365
F ++ L+ L R+ E ++ M I PD V ++++ C G +D A++LY
Sbjct: 466 NKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLY 525
Query: 366 KS---RSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADAL 422
+ E P+ + YN L++ LC A ++L + +D G P T + + L
Sbjct: 526 HEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTL 585
Query: 423 ------CRDGKFEQMKDLVIFALER 441
C G+ +++LV+ L+R
Sbjct: 586 SEKSNSCDKGR-SFLEELVVRLLKR 609
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 127/366 (34%), Gaps = 91/366 (24%)
Query: 442 NIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIA 501
NI ++++ I ALCK V+ + + + TY L+ G K R D A
Sbjct: 182 NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 502 ARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDG 561
LL EM+ G P+ IYN IDG
Sbjct: 242 VLLLDEMQSEGCSPSPV-----------------------------------IYNVLIDG 266
Query: 562 AGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKL-YNTLIVGLCKAM 620
K+ DL R V +L N+ + K +P ++ YNTLI GLC
Sbjct: 267 L--CKKGDLTR-----------VTKLVDNMFL-------KGCVPNEVTYNTLIHGLCLKG 306
Query: 621 KANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGN 680
K + A + M + P+ Y LI L + V +++ +E G + I +
Sbjct: 307 KLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYS 366
Query: 681 TLLLHALKTRDLYEAWIRLRGMLINEQSKISLLGQLIGVFSGCIKVSQDIEGLQKMIEQC 740
L+ K EA R KM E+
Sbjct: 367 VLISGLFKEGKAEEAMSLWR----------------------------------KMAEKG 392
Query: 741 FPLDTYTYNILLRRLS-VSEIDHACELFNRMRRKGYEPDQWTFDILKCGLYNCLRTDEAE 799
+ Y++L+ L + + A E+ NRM G P+ +T+ L G + +EA
Sbjct: 393 CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAV 452
Query: 800 RRLEEM 805
+ +EM
Sbjct: 453 QVWKEM 458
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 96/256 (37%), Gaps = 33/256 (12%)
Query: 136 TLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQG-CFDAVAVVSKQISM 194
LV G GKP+ A + +M G + Y Y L+ + G C +AV V +
Sbjct: 402 VLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKT 461
Query: 195 RGFENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQA 254
N ++++ LC ++ EA+ + ++++ ++ LC + A
Sbjct: 462 GCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAA 521
Query: 255 GKLL------EDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVF 308
KL E+ K + DVV Y++ L L + A++ L S G P+V
Sbjct: 522 LKLYHEMLCQEEPKSQPDVV----TYNILLDGLCMQKDISRAVDLLNSMLD-RGCDPDVI 576
Query: 309 RFNF---------------------LVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNT 347
N LV RLLK R+ + M ++P T
Sbjct: 577 TCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAM 636
Query: 348 VLCFFCKAGMVDVAIE 363
++ CK ++ AI+
Sbjct: 637 IVREICKPKKINAAID 652
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 130 bits (326), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 156/663 (23%), Positives = 261/663 (39%), Gaps = 75/663 (11%)
Query: 132 RFNDTLVMGYALAGKPD---IALHLFGKMRFQGMDLDDYAYHVLLNALVE----QGCFDA 184
+ +D L+ Y K D +AL +F + +GM ++LL +LV Q C +A
Sbjct: 202 KMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEA 261
Query: 185 VAVVSKQISMRGFENDVTR-TIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVD 243
VV K +S DV T + CK K++EAV+ F ++ + V+D
Sbjct: 262 FDVVCKGVS-----PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVID 316
Query: 244 ALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGY 303
L R+++A E +R L Y + ++ L RA R+ A LK +G+
Sbjct: 317 GLGMCGRYDEAFMFKEKMVERGMEPTL-ITYSILVKGLTRAKRIGDAYFVLKEMTK-KGF 374
Query: 304 VPEVFRFNFLVSRLLKE---NRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDV 360
P V +N L+ ++ N+ +E+ DL M +S T NT++ +CK G D
Sbjct: 375 PPNVIVYNNLIDSFIEAGSLNKAIEIKDL---MVSKGLSLTSSTYNTLIKGYCKNGQADN 431
Query: 361 AIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILAD 420
A L K G + N + +I LC A + + + PG L+ L
Sbjct: 432 AERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLIS 491
Query: 421 ALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVA 480
LC+ GK + +L L + + T + + LC+A K++ + I E+ V
Sbjct: 492 GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVM 551
Query: 481 SENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQL 540
+Y LI G + D A L EM + G KP + +I L NM +
Sbjct: 552 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 611
Query: 541 LNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKR 600
+ + + + Y+ IDG +R + + ++ M + P
Sbjct: 612 DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN-------------- 657
Query: 601 KNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMV 660
+YN LI C++ + ++A +M+H G+ P+ Y LIK
Sbjct: 658 -----TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK----------- 701
Query: 661 VGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQSKISLLGQLIGVF 720
G + S + LL + E + LI+ K LGQ++ V
Sbjct: 702 ----------GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK---LGQMVKV- 747
Query: 721 SGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRLSV-SEIDHACELFNRMRRKGYEPDQ 779
C+ L++M + + TY +++ + + A L N MR KG PD
Sbjct: 748 -ECL--------LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 798
Query: 780 WTF 782
T+
Sbjct: 799 ITY 801
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 128/521 (24%), Positives = 216/521 (41%), Gaps = 50/521 (9%)
Query: 301 EGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDV 360
+G P N L++ L++ N + + F + +G +SPD T + FCK G V+
Sbjct: 233 KGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKG-VSPDVYLFTTAINAFCKGGKVEE 291
Query: 361 AIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILAD 420
A++L+ E G++PN + +N +I+ L G EA+ + ++ G+ P T SIL
Sbjct: 292 AVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVK 351
Query: 421 ALCRDGKFEQ----MKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRM 476
L R + +K++ N+ + + D FI A +E+ L+ S+ +
Sbjct: 352 GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 411
Query: 477 NKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCN--METPA 534
+ +TY LI G+ K+ +AD A RLL EM G + +VI LC+ M A
Sbjct: 412 ----TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 467
Query: 535 KQFLQLLNMQLSHQETNFQIYNFFIDG-AGHVKRPDLARAVYELMQRSGLVPQLGSNILM 593
+F+ M L + + I G H K ++ + + +V SN
Sbjct: 468 LRFVG--EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN--- 522
Query: 594 LQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCS 653
L+ GLC+A K + A+ +E+ G Y LI C
Sbjct: 523 -----------------ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 565
Query: 654 TKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEA---W--IRLRGMLINEQS 708
K D ++ + G + ++ + L+ + EA W + GML + +
Sbjct: 566 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 625
Query: 709 KISLLGQLIGVFSGCIKVSQDIEG---LQKMIEQCFPLDTYTYNILLRRLSVS-EIDHAC 764
++ GC K + EG +M+ + +T YN L+R S + A
Sbjct: 626 YSVMI-------DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 678
Query: 765 ELFNRMRRKGYEPDQWTFDILKCGLYNCLRTDEAERRLEEM 805
EL M+ KG P+ T+ L G+ R +EA+ EEM
Sbjct: 679 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM 719
Score = 113 bits (282), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 126/523 (24%), Positives = 214/523 (40%), Gaps = 31/523 (5%)
Query: 131 VRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSK 190
V FN T++ G + G+ D A KM +GM+ Y +L+ L V K
Sbjct: 309 VTFN-TVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLK 367
Query: 191 QISMRGFE-NDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNS 249
+++ +GF N + ++ + +++A+E +VS ++ ++ CKN
Sbjct: 368 EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNG 427
Query: 250 RFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFR 309
+ + A +LL++ V + ++ + L D AL F+ + L P
Sbjct: 428 QADNAERLLKEMLSIGFNVN-QGSFTSVICLLCSHLMFDSALRFV-GEMLLRNMSPGGGL 485
Query: 310 FNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRS 369
L+S L K + + +L+ D T N +L C+AG +D A + K
Sbjct: 486 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 545
Query: 370 EFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFE 429
G + + YN LI+ CG EA+ L + GL P T SIL +C
Sbjct: 546 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL---ICGLFNMN 602
Query: 430 QMKDLVIF--ALERNIKLRDV-TYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYI 486
++++ + F +RN L DV TY I CKA + E G E+ N + Y
Sbjct: 603 KVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYN 662
Query: 487 QLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLS 546
LI + +S R +A L +M+ G P A + ++I+ + + + L M++
Sbjct: 663 HLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME 722
Query: 547 HQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPR 606
E N Y IDG G + ++++ L+ ++ S KN P
Sbjct: 723 GLEPNVFHYTALIDGYGKLG---------QMVKVECLLREMHS-----------KNVHPN 762
Query: 607 KL-YNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELI 648
K+ Y +I G + A + EMR G+ P Y+E I
Sbjct: 763 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 805
Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 178/417 (42%), Gaps = 47/417 (11%)
Query: 395 EAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFE---QMKDLVIFALERNIKLRDVTYD 451
+ + VL N G+FP K T +IL +L R +F+ + D+V + ++ L +
Sbjct: 225 DVFPVLAN---KGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYL----FT 277
Query: 452 KFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEEN 511
I+A CK KVE + S++ + T+ +I G R D A +M E
Sbjct: 278 TAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVER 337
Query: 512 GHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLA 571
G +PT + +++ L + + L M N +YN ID + A
Sbjct: 338 GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA 397
Query: 572 RAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMRE 631
+ +LM GL + YNTLI G CK +A+ A ++E
Sbjct: 398 IEIKDLMVSKGL-------------------SLTSSTYNTLIKGYCKNGQADNAERLLKE 438
Query: 632 MRHNGMYPSMECYEELIKLLCSTKNYDMV---VGVM--NHLEGHGRQVTSFIGNTLLLHA 686
M G + + +I LLCS +D VG M ++ G +T+ I L H
Sbjct: 439 MLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISG-LCKHG 497
Query: 687 LKTRDLYEAWIRL--RGMLINEQSKISLLGQLI--GVFSGCIKVSQDIEGLQKMIEQCFP 742
++ L E W + +G +++ ++ +LL L G ++ ++I G C
Sbjct: 498 KHSKAL-ELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG-----RGCV- 550
Query: 743 LDTYTYNILLRRL-SVSEIDHACELFNRMRRKGYEPDQWTFDILKCGLYNCLRTDEA 798
+D +YN L+ ++D A + M ++G +PD +T+ IL CGL+N + +EA
Sbjct: 551 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 607
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 151/360 (41%), Gaps = 13/360 (3%)
Query: 136 TLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMR 195
TL+ G GK AL L+ + +G +D + LL+ L E G D + K+I R
Sbjct: 488 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 547
Query: 196 GFEND-VTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQA 254
G D V+ ++ C +KK+DEA + ++V + I++ L ++ E+A
Sbjct: 548 GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 607
Query: 255 GKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLV 314
+ +D K R+ ++ Y V + +A R + EF S + P +N L+
Sbjct: 608 IQFWDDCK-RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS-KNVQPNTVVYNHLI 665
Query: 315 SRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLS 374
+ RL +L DMK ISP+ T +++ V+ A L++ GL
Sbjct: 666 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 725
Query: 375 PNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDL 434
PN Y LI+ G + +L+ + P K T +++ RDG + L
Sbjct: 726 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 785
Query: 435 VIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNK 494
+ E+ I +TY +FI GYL + K + E Y +I G+NK
Sbjct: 786 LNEMREKGIVPDSITYKEFI----------YGYLKQGGVLEAFKGSDEENYAAIIEGWNK 835
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 111/515 (21%), Positives = 200/515 (38%), Gaps = 42/515 (8%)
Query: 87 GRQPHFHHTRATFHAIFKLLHCAKLTPLMVDFLENYKKDRYYHQVRFNDTLVMGYALAGK 146
G +P T T+ + K L AK L+ K + V + L+ + AG
Sbjct: 338 GMEP----TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 393
Query: 147 PDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRGFE-NDVTRTI 205
+ A+ + M +G+ L Y+ L+ + G D + K++ GF N + T
Sbjct: 394 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 453
Query: 206 MLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRD 265
++ LC D A+ + +++ G ++ ++ LCK+ + +A +L F ++
Sbjct: 454 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 513
Query: 266 DVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLME 325
VV + + L L AG+LD A K G V + +N L+S + +L E
Sbjct: 514 FVVD-TRTSNALLHGLCEAGKLDEAFRIQKEILG-RGCVMDRVSYNTLISGCCGKKKLDE 571
Query: 326 VFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLIN 385
F +F+D E+ K GL P+ Y+ LI
Sbjct: 572 AF-MFLD------------------------------EMVKR----GLKPDNYTYSILIC 596
Query: 386 SLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKL 445
L EA + + +G+ P T S++ D C+ + E+ ++ + +N++
Sbjct: 597 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 656
Query: 446 RDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLL 505
V Y+ I A C++ ++ + + ++ + TY LI G + +R + A L
Sbjct: 657 NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLF 716
Query: 506 VEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHV 565
EM G +P + A+I + K L M + N Y I G
Sbjct: 717 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARD 776
Query: 566 KRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKR 600
A + M+ G+VP + + YLK+
Sbjct: 777 GNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQ 811
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 129 bits (324), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 116/501 (23%), Positives = 209/501 (41%), Gaps = 60/501 (11%)
Query: 146 KPDIALHLFGKMRFQGMDLDDYA-YHVLLNALVEQGCFDAVAVVSKQISMRGFENDV-TR 203
K D +L LF M Q L A + LL+A+ + +D V + +Q+ M G +++ T
Sbjct: 61 KLDDSLDLFFHM-VQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTC 119
Query: 204 TIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKD 263
I+L C C+ ++ A+ + +++ S G +++ C+ R A +
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF----- 174
Query: 264 RDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRL 323
D +V + GY P V +N ++ L K ++
Sbjct: 175 -DQMVGM-------------------------------GYKPNVVIYNTIIDGLCKSKQV 202
Query: 324 MEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYL 383
DL M++ I PD VT N+++ C +G A + ++ + P+ +N L
Sbjct: 203 DNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNAL 262
Query: 384 INSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNI 443
I++ +G EA E + I L P T S+L LC + ++ +++ F + +
Sbjct: 263 IDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGC 322
Query: 444 KLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAAR 503
VTY I+ CK+ KVE G + E+S+ V + TY LI G+ ++ + ++A
Sbjct: 323 FPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEE 382
Query: 504 LLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAG 563
+ M G P + ++ LC+ K + L +MQ + + + YN I G
Sbjct: 383 IFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMC 442
Query: 564 HVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKAN 623
A +Y + GL+P + + Y T+++GL K
Sbjct: 443 KAGEVADAWDIYCSLNCQGLMPDIWT-------------------YTTMMLGLYKKGLRR 483
Query: 624 LAWGFMREMRHNGMYPSMECY 644
A R+M+ +G+ P+ ECY
Sbjct: 484 EADALFRKMKEDGILPN-ECY 503
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/424 (20%), Positives = 168/424 (39%), Gaps = 22/424 (5%)
Query: 274 YDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDM 333
Y LRN +R +LD +L+ +P + F+ L+S + K + V L+ M
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRP-LPSIADFSRLLSAISKMKKYDVVIYLWEQM 107
Query: 334 KEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGST 393
+ I + T N +L FC+ + +A+ + G P+ + + L+N C
Sbjct: 108 QMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRV 167
Query: 394 HEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKF 453
++A + + G P + + D LC+ + + DL+ + I VTY+
Sbjct: 168 YDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSL 227
Query: 454 ISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGH 513
IS LC + + + S +++ T+ LI K R A EM
Sbjct: 228 ISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL 287
Query: 514 KPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQE-TNFQIYNFFIDGAGHVKRPDLAR 572
P + +I LC M + + ++ +S + Y+ I+G K+ +
Sbjct: 288 DPDIVTYSLLIYGLC-MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM 346
Query: 573 AVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREM 632
++ M + G+V +N + Y LI G C+A K N+A R M
Sbjct: 347 KLFCEMSQRGVV----------------RNTVT---YTILIQGYCRAGKLNVAEEIFRRM 387
Query: 633 RHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDL 692
G++P++ Y L+ LC + + ++ ++ +G N ++ K ++
Sbjct: 388 VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEV 447
Query: 693 YEAW 696
+AW
Sbjct: 448 ADAW 451
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 105/480 (21%), Positives = 169/480 (35%), Gaps = 74/480 (15%)
Query: 322 RLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYN 381
+L + DLF M + + P + +L K DV I L++ G+ N N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 382 YLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGK-------FEQMKDL 434
L+N C A L I G P T L + CR + F+QM
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM--- 177
Query: 435 VIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNK 494
V + N+ V Y+ I LCK+ +V+ + + + + TY LI G
Sbjct: 178 VGMGYKPNV----VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCS 233
Query: 495 SNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNME---TPAKQFLQLLNMQLSHQETN 551
S R A R++ M + P A+I C E + A++F + M + +
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALID-ACVKEGRVSEAEEFYE--EMIRRSLDPD 290
Query: 552 FQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNT 611
Y+ I G R D A ++ M G P + + Y+
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVT-------------------YSI 331
Query: 612 LIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHG 671
LI G CK+ K EM G+ + Y LI+ C ++ + + G
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG 391
Query: 672 RQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQSKISLLGQLIGVFSGCIKVSQDIE 731
+ I +LLH L K+ + +
Sbjct: 392 VH-PNIITYNVLLHGLCDNG---------------------------------KIEKALV 417
Query: 732 GLQKMIEQCFPLDTYTYNILLRRLS-VSEIDHACELFNRMRRKGYEPDQWTFDILKCGLY 790
L M + D TYNI++R + E+ A +++ + +G PD WT+ + GLY
Sbjct: 418 ILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLY 477
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
Query: 137 LVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRG 196
L+ G + + D A +FG M +G D Y +L+N + + + ++S RG
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 197 -FENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAG 255
N VT TI+++ C+ K++ A E F+++V + +++ LC N + E+A
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKAL 416
Query: 256 KLLEDFKDRD---DVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNF 312
+L D + D+V Y++ +R + +AG + A + S N +G +P+++ +
Sbjct: 417 VILADMQKNGMDADIV----TYNIIIRGMCKAGEVADAWDIYCSLNC-QGLMPDIWTYTT 471
Query: 313 LVSRLLKENRLMEVFDLFMDMKEGQISPD 341
++ L K+ E LF MKE I P+
Sbjct: 472 MMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 86/215 (40%), Gaps = 22/215 (10%)
Query: 613 IVGLCKAMKANLAWGFMREMRHNGM--------------------YPSMECYEELIKLLC 652
I G C + +A REM NG+ PS+ + L+ +
Sbjct: 33 ICGFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAIS 92
Query: 653 STKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGML-INEQSKIS 711
K YD+V+ + ++ G N LL + L A L M+ + + I
Sbjct: 93 KMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIV 152
Query: 712 LLGQLIGVFSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRLSVS-EIDHACELFNRM 770
G L+ F +V + +M+ + + YN ++ L S ++D+A +L NRM
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 771 RRKGYEPDQWTFDILKCGLYNCLRTDEAERRLEEM 805
+ G PD T++ L GL + R +A R + M
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCM 247
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 87/211 (41%), Gaps = 14/211 (6%)
Query: 603 GIPRKLY--NTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMV 660
GIP L N L+ C+ + +LA F+ +M G PS+ + L+ C
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170
Query: 661 VGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQSKIS----LLGQL 716
+ + + + G G + I NT++ K++ + A L M E+ I L
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM---EKDGIGPDVVTYNSL 227
Query: 717 IGVFSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRR-LSVSEIDHACELFNRMRRKGY 775
I + S + M ++ D +T+N L+ + + A E + M R+
Sbjct: 228 ISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL 287
Query: 776 EPDQWTFDILKCGLYNCLRTDEAERRLEEMF 806
+PD T+ +L GL R DEA EEMF
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEA----EEMF 314
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 133/602 (22%), Positives = 244/602 (40%), Gaps = 52/602 (8%)
Query: 80 LKFFDWAGRQPHFHHTRATFHAIFKLLHCAKLTPLMVDFLENYKKDRYYHQVRFNDTLVM 139
L FF F HT TF + + L + L+ K ++ +++
Sbjct: 60 LHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVIS 119
Query: 140 GYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRGFEN 199
Y G + A+ +F +++ G D Y+ +L+ L+ + + +V + + GFE
Sbjct: 120 VYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEP 179
Query: 200 DV-TRTIMLKCLCKQKKID----------------EAVEYFQQLVS---------GRECV 233
+V T ++LK LCK K+D +AV Y + S GRE
Sbjct: 180 NVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELA 239
Query: 234 SGF-----MIGIVVDALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLD 288
F + +++ LCK ++ A +L+ + ++ + +Y + L +G+++
Sbjct: 240 ERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKG-ISPNVISYSTLINVLCNSGQIE 298
Query: 289 LALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEG-QISPDGVTMNT 347
LA FL ++ G P ++ + LV + DL+ M G + P+ V NT
Sbjct: 299 LAFSFL-TQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNT 357
Query: 348 VLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHG 407
++ FC G + A+ ++ E G SPN Y LIN GS A + + G
Sbjct: 358 LVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG 417
Query: 408 LFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGY 467
P + + +ALCR KF++ + L+ + N T++ FI LC A +++
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAE 477
Query: 468 LIHSELSRMNKVASE-NTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRC 526
+ ++ + ++ TY +L+ G K+NR + A L E+ G + + + + ++
Sbjct: 478 KVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHG 537
Query: 527 LCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQ 586
CN P + M + + + N I + K+ RA
Sbjct: 538 SCNAGLPGIALQLVGKMMVDGKSPDEITMNMII--LAYCKQGKAERA------------- 582
Query: 587 LGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEE 646
+ +L L S +RK Y +I GLC++ + M G+ PS+ +
Sbjct: 583 --AQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSV 640
Query: 647 LI 648
LI
Sbjct: 641 LI 642
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 119/528 (22%), Positives = 206/528 (39%), Gaps = 69/528 (13%)
Query: 201 VTRTIMLKCLCKQKKIDEAVEYFQQL-VSGRECVSGFMIGIVVDALCKNSRFEQAGKLLE 259
+T +M++ L ++D QQ+ + G C I V+ + E+A ++
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFIS-VISVYRQVGLAERAVEMFY 135
Query: 260 DFKDR--DDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRL 317
K+ D VK+ Y+ L L+ R+ + + +G+ P VF +N L+ L
Sbjct: 136 RIKEFGCDPSVKI---YNHVLDTLLGENRIQMIYMVYRDMKR-DGFEPNVFTYNVLLKAL 191
Query: 318 LKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDV----------------- 360
K N++ L ++M PD V+ TV+ C+ G+V
Sbjct: 192 CKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNA 251
Query: 361 -------------AIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHG 407
A EL + E G+SPN I Y+ LIN LC G A+ L + G
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311
Query: 408 LFPGKKTLSILADA-LCRDGKFEQM----KDLVIFALERNIKLRDVTYDKFISALCKANK 462
P TLS L R F+ + + + F L+ N+ V Y+ + C
Sbjct: 312 CHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNV----VAYNTLVQGFCSHGN 367
Query: 463 VEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRA 522
+ + S + + + TY LI+GF K D A + +M +G P ++
Sbjct: 368 IVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTN 427
Query: 523 VIRCLCNMET--PAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQR 580
++ LC A+ +++++ + + + +N FI G R D A V+ M++
Sbjct: 428 MVEALCRHSKFKEAESLIEIMSKE--NCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQ 485
Query: 581 SGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPS 640
P NI+ YN L+ GL KA + A+G RE+ G+ S
Sbjct: 486 QHRCP---PNIVT---------------YNELLDGLAKANRIEEAYGLTREIFMRGVEWS 527
Query: 641 MECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALK 688
Y L+ C+ + + ++ + G+ N ++L K
Sbjct: 528 SSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCK 575
Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 170/424 (40%), Gaps = 41/424 (9%)
Query: 302 GYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVA 361
G P V +N ++ LL ENR+ ++ ++ DMK P+ T N +L CK VD A
Sbjct: 141 GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGA 200
Query: 362 IELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADA 421
+L S G P+ + Y +I+S+C G E E+ + P + L +
Sbjct: 201 KKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER-----FEPVVSVYNALING 255
Query: 422 LCRD----GKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMN 477
LC++ G FE M+++V E+ I ++Y I+ LC + ++E+ + +++ +
Sbjct: 256 LCKEHDYKGAFELMREMV----EKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311
Query: 478 KVASENTYIQLIHG-FNKSNRADIAARLLVEMEEN-GHKPTRALHRAVIRCLCNMETPAK 535
+ T L+ G F + D A L +M G +P + +++ C+ K
Sbjct: 312 CHPNIYTLSSLVKGCFLRGTTFD-ALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVK 370
Query: 536 QFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQ 595
+M+ N + Y I+G D A ++ M SG P +
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNV-------- 422
Query: 596 SYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTK 655
+Y ++ LC+ K A + M PS+ + IK LC
Sbjct: 423 -----------VVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAG 471
Query: 656 NYDMVVGVMNHLEGHGRQVTSFIGNTLLLHAL-KTRDLYEAW-----IRLRGMLINEQSK 709
D V +E R + + LL L K + EA+ I +RG+ + +
Sbjct: 472 RLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTY 531
Query: 710 ISLL 713
+LL
Sbjct: 532 NTLL 535
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 153/368 (41%), Gaps = 42/368 (11%)
Query: 98 TFHAIFKLLHCAKLTPLMVDFLENYKKDRYYHQVRFNDTLVMGYALAGKPDIALHLFGKM 157
++ + +L + L FL K + + +LV G L G AL L+ +M
Sbjct: 283 SYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM 342
Query: 158 -RFQGMDLDDYAYHVLLNALVEQG-CFDAVAVVSKQISMRGFENDVTRTIMLKCLCKQKK 215
R G+ + AY+ L+ G AV+V S + N T ++ K+
Sbjct: 343 IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGS 402
Query: 216 IDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYD 275
+D AV + ++++ C + + +V+ALC++S+F++A L+E +++ ++
Sbjct: 403 LDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIE-IMSKENCAPSVPTFN 461
Query: 276 VWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVF----DLFM 331
+++ L AGRLD A + + P + +N L+ L K NR+ E + ++FM
Sbjct: 462 AFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFM 521
Query: 332 D--------------------------------MKEGQISPDGVTMNTVLCFFCKAGMVD 359
M +G+ SPD +TMN ++ +CK G +
Sbjct: 522 RGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGK-SPDEITMNMIILAYCKQGKAE 580
Query: 360 VAIELYK--SRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSI 417
A ++ S P+ I Y +I LC + +L+ I G+ P T S+
Sbjct: 581 RAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSV 640
Query: 418 LADALCRD 425
L + D
Sbjct: 641 LINCFILD 648
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 158/413 (38%), Gaps = 17/413 (4%)
Query: 125 DRYYHQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDA 184
+R+ V + L+ G A L +M +G+ + +Y L+N L G +
Sbjct: 240 ERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIEL 299
Query: 185 VAVVSKQISMRGFENDV-TRTIMLK-CLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIV- 241
Q+ RG ++ T + ++K C + D A++ + Q++ G G +V
Sbjct: 300 AFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFD-ALDLWNQMIRG----FGLQPNVVA 354
Query: 242 ----VDALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSK 297
V C + +A + ++ + + Y + + G LD A+ ++ +K
Sbjct: 355 YNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNI-RTYGSLINGFAKRGSLDGAV-YIWNK 412
Query: 298 NSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGM 357
G P V + +V L + ++ E L M + +P T N + C AG
Sbjct: 413 MLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGR 472
Query: 358 VDVAIELYKS-RSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLS 416
+D A ++++ + PN + YN L++ L EAY + + G+ T +
Sbjct: 473 LDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYN 532
Query: 417 ILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELS-- 474
L C G LV + ++T + I A CK K E + +S
Sbjct: 533 TLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCG 592
Query: 475 RMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCL 527
R +Y +I G +SN + LL M G P+ A +I C
Sbjct: 593 RRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 149/375 (39%), Gaps = 37/375 (9%)
Query: 437 FALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSN 496
F + ++K+ Y+ + L N++++ Y+++ ++ R + TY L+ K+N
Sbjct: 140 FGCDPSVKI----YNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNN 195
Query: 497 RADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYN 556
+ D A +LLVEM G P + VI +C + K+ +L E +YN
Sbjct: 196 KVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGL-VKEGRELA----ERFEPVVSVYN 250
Query: 557 FFIDGAGHVKRPDLARAVYELMQR---SGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLI 613
I+G K D + +ELM+ G+ P + S Y+TLI
Sbjct: 251 ALINGL--CKEHDY-KGAFELMREMVEKGISPNVIS-------------------YSTLI 288
Query: 614 VGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIK-LLCSTKNYDMVVGVMNHLEGHGR 672
LC + + LA+ F+ +M G +P++ L+K +D + + G G
Sbjct: 289 NVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGL 348
Query: 673 QVTSFIGNTLLLHALKTRDLYEAWIRLRGML-INEQSKISLLGQLIGVFSGCIKVSQDIE 731
Q NTL+ ++ +A M I I G LI F+ + +
Sbjct: 349 QPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVY 408
Query: 732 GLQKMIEQ-CFPLDTYTYNILLRRLSVSEIDHACELFNRMRRKGYEPDQWTFDILKCGLY 790
KM+ C P N++ S+ A L M ++ P TF+ GL
Sbjct: 409 IWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLC 468
Query: 791 NCLRTDEAERRLEEM 805
+ R D AE+ +M
Sbjct: 469 DAGRLDWAEKVFRQM 483
Score = 59.7 bits (143), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 132/345 (38%), Gaps = 24/345 (6%)
Query: 480 ASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQ 539
SE+ +I +I + + A+ A + ++E G P+ ++ V+ L ++
Sbjct: 109 CSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMV 168
Query: 540 LLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSY-- 597
+M+ E N YN + + D A+ + M G P S ++ S
Sbjct: 169 YRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCE 228
Query: 598 ---------LKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELI 648
L + +YN LI GLCK A+ MREM G+ P++ Y LI
Sbjct: 229 VGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLI 288
Query: 649 KLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLL------HALKTRDLYEAWIRLRGM 702
+LC++ ++ + + G + ++L+ DL+ IR G+
Sbjct: 289 NVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGL 348
Query: 703 LINEQSKISLLGQLIGVFSGCIKVSQDIEGLQKMIE-QCFPLDTYTYNILLRRLSV-SEI 760
Q + L+ F + + + M E C P + TY L+ + +
Sbjct: 349 ----QPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSP-NIRTYGSLINGFAKRGSL 403
Query: 761 DHACELFNRMRRKGYEPDQWTFDILKCGLYNCLRTDEAERRLEEM 805
D A ++N+M G P+ + + L + EAE +E M
Sbjct: 404 DGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIM 448
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 134/568 (23%), Positives = 218/568 (38%), Gaps = 60/568 (10%)
Query: 240 IVVDALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNS 299
+++ L N F+ +LL KD V K E + +R+ +AG + +
Sbjct: 116 VLIGKLGANGEFKTIDRLLIQMKDEGIVFK-ESLFISIMRDYDKAGFPGQTTRLMLEMRN 174
Query: 300 LEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVD 359
+ P +N ++ L+ N ++F DM +I P T V+ FC +D
Sbjct: 175 VYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEID 234
Query: 360 VAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILA 419
A+ L + ++ G PN ++Y LI+SL +EA ++L+ G P +T + +
Sbjct: 235 SALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVI 294
Query: 420 DALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKV 479
LC+ + + +V L R D+TY ++ LCK +V+ + + + V
Sbjct: 295 LGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIV 354
Query: 480 ASENTYIQLIHGFNKSNRADIAARLLVEMEEN-GHKPTRALHRAVIRCLCNMETPAKQFL 538
+ LIHGF R D A +L +M + G P + ++I
Sbjct: 355 ----IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410
Query: 539 QLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYL 598
L +M+ + N Y +DG + + D A V M GL P
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG--------- 461
Query: 599 KRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYD 658
+N LI CK + A REM G P + + LI LC
Sbjct: 462 ----------FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 659 MVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQSKISLLGQLIG 718
+ ++ + G + NTL+ L+ ++ EA L+NE
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR-----KLVNE------------ 554
Query: 719 VFSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRLS-VSEIDHACELFNRMRRKGYEP 777
M+ Q PLD TYN L++ L E+D A LF +M R G+ P
Sbjct: 555 -----------------MVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAP 597
Query: 778 DQWTFDILKCGLYNCLRTDEAERRLEEM 805
+ +IL GL +EA +EM
Sbjct: 598 SNISCNILINGLCRSGMVEEAVEFQKEM 625
Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 149/630 (23%), Positives = 257/630 (40%), Gaps = 32/630 (5%)
Query: 75 DVLSCLKFFDWAGRQPHFHHTRATFHAIFKLLHCAKLTPLMVDFLENYKKDRYYHQVRFN 134
+V + ++ F W G Q + H+ + + L + L K + +
Sbjct: 90 NVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLF 149
Query: 135 DTLVMGYALAGKPDIALHLFGKMR-FQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQIS 193
+++ Y AG P L +MR + +Y+V+L LV C A V +
Sbjct: 150 ISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDML 209
Query: 194 MRGFENDV-TRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMI-GIVVDALCKNSRF 251
R + T +++K C +ID A+ + + + CV +I ++ +L K +R
Sbjct: 210 SRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM-TKHGCVPNSVIYQTLIHSLSKCNRV 268
Query: 252 EQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFN 311
+A +LLE+ V E DV L L + R++ A + + ++ + G+ P+ +
Sbjct: 269 NEALQLLEEMFLMGCVPDAETFNDVIL-GLCKFDRINEAAKMV-NRMLIRGFAPDDITYG 326
Query: 312 FLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSR-SE 370
+L++ L K R+ DLF + + P+ V NT++ F G +D A + +
Sbjct: 327 YLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTS 382
Query: 371 FGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQ 430
+G+ P+ YN LI +G A EVL + + G P + +IL D C+ GK ++
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442
Query: 431 MKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIH 490
+++ +K V ++ ISA CK +++ I E+ R T+ LI
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 502
Query: 491 GFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLN-MQLSHQE 549
G + + A LL +M G + +I K+ +L+N M
Sbjct: 503 GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR-RGEIKEARKLVNEMVFQGSP 561
Query: 550 TNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLY 609
+ YN I G D AR+++E M R G P SNI
Sbjct: 562 LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAP---SNISC---------------- 602
Query: 610 NTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEG 669
N LI GLC++ A F +EM G P + + LI LC + + + L+
Sbjct: 603 NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA 662
Query: 670 HGRQVTSFIGNTLLLHALKTRDLYEAWIRL 699
G + NTL+ K +Y+A + L
Sbjct: 663 EGIPPDTVTFNTLMSWLCKGGFVYDACLLL 692
Score = 119 bits (299), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 115/514 (22%), Positives = 206/514 (40%), Gaps = 29/514 (5%)
Query: 148 DIALHLFGKMRFQGMDLDDYAYHVLLNALVE-QGCFDAVAVVSKQISMRGFENDVTRTIM 206
D AL L M G + Y L+++L + +A+ ++ + M + T +
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 293
Query: 207 LKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRDD 266
+ LCK +I+EA + +++ G +++ LCK R + A L +
Sbjct: 294 ILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEI 353
Query: 267 VVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEV 326
V+ ++ + V GRLD A L + G VP+V +N L+ KE +
Sbjct: 354 VI-----FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 327 FDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINS 386
++ DM+ P+ + ++ FCK G +D A + S GL PN + +N LI++
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 387 LCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLR 446
C + EA E+ + G P T + L LC + + L+ + +
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528
Query: 447 DVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLV 506
VTY+ I+A + +++ + +E+ E TY LI G ++ D A L
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 507 EMEENGHKPTRALHRAVIRCLC--NMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGH 564
+M +GH P+ +I LC M A +F + M L + +N I+G
Sbjct: 589 KMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK--EMVLRGSTPDIVTFNSLINGLCR 646
Query: 565 VKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANL 624
R + ++ +Q G+ P + +NTL+ LCK
Sbjct: 647 AGRIEDGLTMFRKLQAEGIPPDTVT-------------------FNTLMSWLCKGGFVYD 687
Query: 625 AWGFMREMRHNGMYPSMECYEELIKLLCSTKNYD 658
A + E +G P+ + L++ + + D
Sbjct: 688 ACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 2/155 (1%)
Query: 135 DTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISM 194
++L+ G AG+ D A LF KM G + + ++L+N L G + K++ +
Sbjct: 568 NSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVL 627
Query: 195 RGFEND-VTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQ 253
RG D VT ++ LC+ +I++ + F++L + ++ LCK F
Sbjct: 628 RGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG-FVY 686
Query: 254 AGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLD 288
LL D D V + + + L++++ LD
Sbjct: 687 DACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 717 IGVFSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRL-SVSEIDHACELFNRMRRKGY 775
I V C KV+ ++ M+ + P +T+ ++++ +V+EID A L M + G
Sbjct: 191 ILVSGNCHKVAANV--FYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGC 248
Query: 776 EPDQWTFDILKCGLYNCLRTDEAERRLEEMF 806
P+ + L L C R +EA + LEEMF
Sbjct: 249 VPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 279
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 165/388 (42%), Gaps = 27/388 (6%)
Query: 273 AYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMD 332
+Y++ + L R R +AL + K GY P+V + L++ + NR+ + DL
Sbjct: 106 SYNIVINCLCRCSRFVIALSVV-GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK 164
Query: 333 MKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGS 392
M+E PD V NT++ CK G+V+ A+EL+ G+ + + YN L+ LC G
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 393 THEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDK 452
+A ++++ + + P T + + D ++GKF + L R + TY+
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 453 FISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENG 512
I+ LC +V+ + + + TY LI+GF KS R D +L EM + G
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 513 HKPTRALHRAVIRCLCNMETP--AKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDL 570
+ +I+ P A++ ++ N + Y+ + G R +
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMD-----SRPNIRTYSILLYGLCMNWRVEK 399
Query: 571 ARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMR 630
A ++E MQ+S + + + YN +I G+CK AW R
Sbjct: 400 ALVLFENMQKSEIELDITT-------------------YNIVIHGMCKIGNVEDAWDLFR 440
Query: 631 EMRHNGMYPSMECYEELIKLLCSTKNYD 658
+ G+ P + Y +I C + +D
Sbjct: 441 SLSCKGLKPDVVSYTTMISGFCRKRQWD 468
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 168/374 (44%), Gaps = 18/374 (4%)
Query: 149 IALHLFGKMRFQGMDLDDYAYHVLLNALVEQG-CFDAVAVVSKQISMRGFENDVT-RTIM 206
IAL + GKM G + D L+N + FDA+ +VSK M GF DV +
Sbjct: 122 IALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM-GFRPDVVIYNTI 180
Query: 207 LKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRD- 265
+ CK +++AVE F ++ +V LC + R+ A +L+ D RD
Sbjct: 181 IDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDI 240
Query: 266 --DVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRL 323
+V+ DV+ V+ G+ A++ L + + P+VF +N L++ L R+
Sbjct: 241 VPNVITFTAVIDVF----VKEGKFSEAMK-LYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295
Query: 324 MEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYL 383
E + M PD VT NT++ FCK+ VD +L++ ++ GL + I YN +
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355
Query: 384 INSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFA--LER 441
I G A E+ P +T SIL LC + + E K LV+F +
Sbjct: 356 IQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVE--KALVLFENMQKS 410
Query: 442 NIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIA 501
I+L TY+ I +CK VE + + LS +Y +I GF + + D +
Sbjct: 411 EIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKS 470
Query: 502 ARLLVEMEENGHKP 515
L +M+E+G P
Sbjct: 471 DLLYRKMQEDGLLP 484
Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 137/297 (46%), Gaps = 8/297 (2%)
Query: 116 VDFLENYKKDRYYHQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNA 175
V+ + ++D ++LV G +G+ A L M + + + + +++
Sbjct: 194 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 253
Query: 176 LVEQGCFDAVAVVSKQISMRGFENDV-TRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVS 234
V++G F + ++++ R + DV T ++ LC ++DEA + +V+ + C+
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVT-KGCLP 312
Query: 235 GFMI-GIVVDALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEF 293
+ +++ CK+ R ++ KL + R +V Y+ ++ +AGR D A E
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRG-LVGDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 294 LKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFC 353
+S P + ++ L+ L R+ + LF +M++ +I D T N V+ C
Sbjct: 372 FSRMDSR----PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMC 427
Query: 354 KAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFP 410
K G V+ A +L++S S GL P+ + Y +I+ C ++ + + + GL P
Sbjct: 428 KIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/382 (20%), Positives = 158/382 (41%), Gaps = 34/382 (8%)
Query: 449 TYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEM 508
+Y+ I+ LC+ ++ + + ++ + T LI+GF + NR A L+ +M
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 509 EENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKR- 567
EE G +P ++ +I C + M+ + YN + G R
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 568 PDLARAVYELMQRSGLVPQLGSNILMLQSYLK---------------RKNGIPRKL-YNT 611
D AR + +++ R +VP + + ++ ++K R+ P YN+
Sbjct: 226 SDAARLMRDMVMRD-IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 612 LIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHG 671
LI GLC + + A + M G P + Y LI C +K D + + G
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 672 RQVTSFIGNTLL---LHALKTRDLYEAWIRLRGMLINEQSKISLLGQLIGVFSGCI--KV 726
+ NT++ A + E + R+ S+ ++ I ++ C+ +V
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRM-------DSRPNIRTYSILLYGLCMNWRV 397
Query: 727 SQDIEGLQKMIEQCFPLDTYTYNILLRRL-SVSEIDHACELFNRMRRKGYEPDQWTFDIL 785
+ + + M + LD TYNI++ + + ++ A +LF + KG +PD ++ +
Sbjct: 398 EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 457
Query: 786 KCGLYNCLRTDEAE---RRLEE 804
G + D+++ R+++E
Sbjct: 458 ISGFCRKRQWDKSDLLYRKMQE 479
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 2/198 (1%)
Query: 610 NTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEG 669
++LI G C+ + A + +M G P + Y +I C + V + + +E
Sbjct: 143 SSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMER 202
Query: 670 HGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINE-QSKISLLGQLIGVFSGCIKVSQ 728
G + + N+L+ + +A +R M++ + + +I VF K S+
Sbjct: 203 DGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSE 262
Query: 729 DIEGLQKMIEQCFPLDTYTYNILLRRLSV-SEIDHACELFNRMRRKGYEPDQWTFDILKC 787
++ ++M +C D +TYN L+ L + +D A ++ + M KG PD T++ L
Sbjct: 263 AMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLIN 322
Query: 788 GLYNCLRTDEAERRLEEM 805
G R DE + EM
Sbjct: 323 GFCKSKRVDEGTKLFREM 340
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 8/172 (4%)
Query: 639 PSMECYEELIKLLCSTKNYDMVVGVMNHLE--GHGRQVTSFIGNTLLLHALKTRDLYEAW 696
PS+ + +++ + +KNYD+V+ + +H+E G G + S+ ++++ L +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSY---NIVINCLCRCSRFVIA 123
Query: 697 IRLRG--MLINEQSKISLLGQLIGVFSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLR- 753
+ + G M + + + LI F +V I+ + KM E F D YN ++
Sbjct: 124 LSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDG 183
Query: 754 RLSVSEIDHACELFNRMRRKGYEPDQWTFDILKCGLYNCLRTDEAERRLEEM 805
+ ++ A ELF+RM R G D T++ L GL R +A R + +M
Sbjct: 184 SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
Score = 39.7 bits (91), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 92/204 (45%), Gaps = 12/204 (5%)
Query: 609 YNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLE 668
YN +I LC+ + +A + +M G P + LI C + +++ +E
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Query: 669 GHGRQVTSFIGNTLLLHALK---TRDLYEAWIRLR--GMLINEQSKISLLGQLI--GVFS 721
G + I NT++ + K D E + R+ G+ + + SL+ L G +S
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226
Query: 722 GCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRLSVSEIDHACELFNRMRRKGYEPDQWT 781
++ +D+ ++ ++ T ++ ++ SE A +L+ M R+ +PD +T
Sbjct: 227 DAARLMRDMV-MRDIVPNVITF-TAVIDVFVKEGKFSE---AMKLYEEMTRRCVDPDVFT 281
Query: 782 FDILKCGLYNCLRTDEAERRLEEM 805
++ L GL R DEA++ L+ M
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLM 305
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 151/686 (22%), Positives = 277/686 (40%), Gaps = 62/686 (9%)
Query: 136 TLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMR 195
+L++G D + L +M G+ + Y + + + L G + + K++
Sbjct: 228 SLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDE 287
Query: 196 GFENDV-TRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQA 254
G DV T T+++ LC +K+D A E F+++ +GR ++D N +
Sbjct: 288 GCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSV 347
Query: 255 GKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLV 314
+ + ++D V + + + L +AG A + L +G +P + +N L+
Sbjct: 348 KQFWSEM-EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRD-QGILPNLHTYNTLI 405
Query: 315 SRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLS 374
LL+ +RL + +LF +M+ + P T + ++ K+G A+E ++ G++
Sbjct: 406 CGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIA 465
Query: 375 PNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDL 434
PN + N + SL G EA ++ D GL P T +++ + G+ ++ L
Sbjct: 466 PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKL 525
Query: 435 VIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNK 494
+ +E + + + I+ L KA++V+ + + + M + TY L+ G K
Sbjct: 526 LSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGK 585
Query: 495 SNRADIAARLLVEMEENGHKPTRALHRAVIRCLCN---METPAKQFLQLLNMQLSHQETN 551
+ + A L M + G P + CLC + K ++++M
Sbjct: 586 NGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFT 645
Query: 552 FQIYNFFIDGAGHVKRP-----DLARAVY-ELMQRSGLVPQLGSNILMLQSYLKRKNGIP 605
+ F + G VK + + VY + + L+P + L+ +Y I
Sbjct: 646 YNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAY----KIIT 701
Query: 606 RKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMN 665
LYN C ANL W E+LI + + D V
Sbjct: 702 NFLYN------CADQPANLFW------------------EDLIGSILAEAGIDNAVSFSE 737
Query: 666 HLEGHGRQVTSFIGNTLLLHALK----------TRDLYEAWIRLRGMLINEQSKISLLGQ 715
L +G G+++L+ ++ R L+E + + G+ Q K+
Sbjct: 738 RLVANG---ICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGV----QPKLPTYNL 790
Query: 716 LIGVF--SGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRLSVS-EIDHACELFNRMRR 772
LIG + I+++QD+ LQ C P D TYN LL S +ID EL+ M
Sbjct: 791 LIGGLLEADMIEIAQDVF-LQVKSTGCIP-DVATYNFLLDAYGKSGKIDELFELYKEMST 848
Query: 773 KGYEPDQWTFDILKCGLYNCLRTDEA 798
E + T +I+ GL D+A
Sbjct: 849 HECEANTITHNIVISGLVKAGNVDDA 874
Score = 112 bits (281), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 158/688 (22%), Positives = 270/688 (39%), Gaps = 84/688 (12%)
Query: 135 DTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVS--KQI 192
+TL+ G + D AL LFG M G+ Y Y V ++ + G D+V+ + +++
Sbjct: 402 NTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSG--DSVSALETFEKM 459
Query: 193 SMRGF-ENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRF 251
+G N V L L K + EA + F L IG+V D++
Sbjct: 460 KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKD---------IGLVPDSV------ 504
Query: 252 EQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFN 311
Y++ ++ + G +D A++ L S+ G P+V N
Sbjct: 505 ---------------------TYNMMMKCYSKVGEIDEAIKLL-SEMMENGCEPDVIVVN 542
Query: 312 FLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEF 371
L++ L K +R+ E + +FM MKE ++ P VT NT+L K G + AIEL++ +
Sbjct: 543 SLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK 602
Query: 372 GLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGK---- 427
G PN I +N L + LC + A ++L +D G P T + + L ++G+
Sbjct: 603 GCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA 662
Query: 428 ---FEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENT 484
F QMK LV VT + + KA+ +E Y I + N
Sbjct: 663 MCFFHQMKKLVYPDF--------VTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANL 714
Query: 485 YIQ-LIHGFNKSNRADIAARLLVEMEENG-HKPTRALHRAVIRCLC--NMETPAKQFLQL 540
+ + LI D A + NG + ++ +IR C N + A+ +
Sbjct: 715 FWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEK 774
Query: 541 LNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKR 600
L Q YN I G ++A+ V+ ++ +G +P + +
Sbjct: 775 FTKDLGVQP-KLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVAT----------- 822
Query: 601 KNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMV 660
YN L+ K+ K + + +EM + + + +I L N D
Sbjct: 823 --------YNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Query: 661 VGVMNHL-EGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGML-INEQSKISLLGQLIG 718
+ + L T+ L+ K+ LYEA GML + ++ LI
Sbjct: 875 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934
Query: 719 VFSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRLS-VSEIDHACELFNRMRRKGYEP 777
F + ++M+++ D TY++L+ L V +D F ++ G P
Sbjct: 935 GFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNP 994
Query: 778 DQWTFDILKCGLYNCLRTDEAERRLEEM 805
D ++++ GL R +EA EM
Sbjct: 995 DVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 118/517 (22%), Positives = 208/517 (40%), Gaps = 57/517 (11%)
Query: 302 GYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVA 361
G+V + +N L+ LLK E +++ M P T ++++ K +D
Sbjct: 183 GFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSV 242
Query: 362 IELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADA 421
+ L K GL PN + I L G +EAYE+LK D G P T ++L DA
Sbjct: 243 MGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDA 302
Query: 422 LCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVAS 481
LC K + K++ ++K + K ++V
Sbjct: 303 LCTARKLDCAKEV---------------FEKMKTGRHKPDRV------------------ 329
Query: 482 ENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLL 541
TYI L+ F+ + D + EME++GH P ++ LC + F L
Sbjct: 330 --TYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLD 387
Query: 542 NMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVP-------------QLG 588
M+ N YN I G V R D A ++ M+ G+ P + G
Sbjct: 388 VMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSG 447
Query: 589 SNILMLQSYLKRKN-GIPRKLY--NTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYE 645
++ L+++ K K GI + N + L KA + A ++ G+ P Y
Sbjct: 448 DSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYN 507
Query: 646 ELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAW---IRLRGM 702
++K D + +++ + +G + + N+L+ K + EAW +R++ M
Sbjct: 508 MMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEM 567
Query: 703 LINEQSKISLLGQLIGVFSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRLSVS-EID 761
+ + + L+ K+ + IE + M+++ P +T T+N L L + E+
Sbjct: 568 KL--KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 625
Query: 762 HACELFNRMRRKGYEPDQWTFDILKCGLYNCLRTDEA 798
A ++ +M G PD +T++ + GL + EA
Sbjct: 626 LALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA 662
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 176/812 (21%), Positives = 306/812 (37%), Gaps = 163/812 (20%)
Query: 29 IFQILSTHDDEDSASRFAADQALSELGIRLTESFALQVLNYGKKTKDVLSCLKFFD---W 85
I +L H +D+ F + LG++ T + ++Y K+ D +S L+ F+
Sbjct: 405 ICGLLRVHRLDDALELFGN---MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKT 461
Query: 86 AGRQPHFHHTRATFHAIFK---------LLHCAKLTPLMVDFLENYKKDRYYHQVRFNDT 136
G P+ A+ +++ K + + K L+ D V +N
Sbjct: 462 KGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD------------SVTYN-M 508
Query: 137 LVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFD-AVAVVSKQISMR 195
++ Y+ G+ D A+ L +M G + D + L+N L + D A + + M+
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568
Query: 196 GFENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAG 255
VT +L L K KI EA+E F+ +V + + D LCKN A
Sbjct: 569 LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLAL 628
Query: 256 KLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVS 315
K+L D V + Y+ + LV+ G++ A+ F L P+ L+
Sbjct: 629 KMLFKMMDMGCVPDV-FTYNTIIFGLVKNGQVKEAMCFFHQMKKL--VYPDFVTLCTLLP 685
Query: 316 RLLKENRLMEVF---------------DLFMDMKEGQISPDGVTMNTV----------LC 350
++K + + + + +LF + G I + N V +C
Sbjct: 686 GVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGIC 745
Query: 351 ------------FFCKAGMVDVAIELY-KSRSEFGLSPNGIVYNYLINSLCGDGSTHEAY 397
+ CK V A L+ K + G+ P YN LI L A
Sbjct: 746 RDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQ 805
Query: 398 EVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISAL 457
+V G P T + L DA + GK +++ +L + +T++ IS L
Sbjct: 806 DVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGL 865
Query: 458 CKANKVEVGYLIHSEL-SRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPT 516
KA V+ ++ +L S + + TY LI G +KS R A +L M + G +P
Sbjct: 866 VKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP- 924
Query: 517 RALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYE 576
N IYN I+G G D A A+++
Sbjct: 925 ----------------------------------NCAIYNILINGFGKAGEADAACALFK 950
Query: 577 LMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNG 636
M + G+ P L K Y+ L+ LC + + + +E++ +G
Sbjct: 951 RMVKEGVRPDL-------------------KTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 637 MYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAW 696
+ P + CY +I L + + + + N ++ R +T DLY
Sbjct: 992 LNPDVVCYNLIINGLGKSHRLEEALVLFNEMK-TSRGITP--------------DLY--- 1033
Query: 697 IRLRGMLINEQSKISLLGQLIGVFSGCIKVSQDIE--GLQKMIEQCFPLDTYTYNILLRR 754
S I LG + G+ K+ +I+ GL+ + +T+N L+R
Sbjct: 1034 --------TYNSLILNLG-IAGMVEEAGKIYNEIQRAGLEP--------NVFTFNALIRG 1076
Query: 755 LSVS-EIDHACELFNRMRRKGYEPDQWTFDIL 785
S+S + +HA ++ M G+ P+ T++ L
Sbjct: 1077 YSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 106/250 (42%), Gaps = 37/250 (14%)
Query: 137 LVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRG 196
L+ G + +G+ A LF M G + Y++L+N + G DA + K++ G
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 197 FENDV-TRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAG 255
D+ T ++++ CLC ++DE + YF++L G+ D +C
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES---------GLNPDVVC--------- 998
Query: 256 KLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVS 315
Y++ + L ++ RL+ AL + G P+++ +N L+
Sbjct: 999 ------------------YNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLIL 1040
Query: 316 RLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSP 375
L + E ++ +++ + P+ T N ++ + +G + A +Y++ G SP
Sbjct: 1041 NLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSP 1100
Query: 376 NGIVYNYLIN 385
N Y L N
Sbjct: 1101 NTGTYEQLPN 1110
Score = 33.9 bits (76), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 728 QDIEGLQKMIEQCFPL----DTYTYNILLRRLS-VSEIDHACELFNRMRRKGYEPDQWTF 782
+DI+ + ++++ L + YT+ I +R L +I+ A E+ RM +G PD T+
Sbjct: 237 RDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTY 296
Query: 783 DILKCGLYNCLRTDEAERRLEEM 805
+L L + D A+ E+M
Sbjct: 297 TVLIDALCTARKLDCAKEVFEKM 319
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/471 (22%), Positives = 195/471 (41%), Gaps = 29/471 (6%)
Query: 183 DAVAVVSKQISMRGFENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVV 242
DA ++ + + R + V T +L + K K D + + ++ + + I++
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 243 DALCK----NSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKN 298
C+ + GK+++ R +V L L + R A+ + S +
Sbjct: 122 HCFCRCSRLSLALALLGKMMK-LGFRPSIVTLGS----LLNGFCQGNRFQEAVSLVDSMD 176
Query: 299 SLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMV 358
G+VP V +N +++ L K L ++F M++ I D VT NT++ +G
Sbjct: 177 GF-GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 235
Query: 359 DVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSIL 418
A L + + + PN I + LI++ +G+ EA + K I + P T + L
Sbjct: 236 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295
Query: 419 ADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNK 478
+ C G K + + + VTY+ I+ CK+ +VE G + E++
Sbjct: 296 INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 355
Query: 479 VASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFL 538
V TY LIHG+ ++ + ++A ++ M + G P + ++ CLCN K +
Sbjct: 356 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALV 415
Query: 539 QLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYL 598
+ ++Q S + + YN I G + A ++ + R G+ P +
Sbjct: 416 MVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIA--------- 466
Query: 599 KRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIK 649
Y T+I GLC+ A R M+ +G PS Y+E ++
Sbjct: 467 ----------YITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 507
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 190/474 (40%), Gaps = 48/474 (10%)
Query: 91 HFHHTRATFHAIFKLLHCAKLTPLMVDFLENYKKDRYYHQVRFNDTLVMGYALAGKPDIA 150
H HH R LHC K F E + V F L + A K DI
Sbjct: 43 HHHHYRERLR---NELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTV-IAKMNKFDIV 98
Query: 151 LHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRGFEND-VTRTIMLKC 209
++L+ KM G+ D Y++ +L++ + ++ GF VT +L
Sbjct: 99 IYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNG 158
Query: 210 LCKQKKIDEAVEYFQQLVSGRECVSGFMI-GIVVDALCKNSRFEQAGKL---LEDFKDRD 265
C+ + EAV + G V +I V++ LCKN A ++ +E R
Sbjct: 159 FCQGNRFQEAVSLVDSM-DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRA 217
Query: 266 DVVKLEKAYDVWLRNLVRAGRLDLALE-----------------------FLKSKNSLEG 302
D V Y+ + L +GR A F+K N LE
Sbjct: 218 DAV----TYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA 273
Query: 303 -----------YVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCF 351
VP VF +N L++ L + +F M PD VT NT++
Sbjct: 274 RNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITG 333
Query: 352 FCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPG 411
FCK+ V+ ++L+ + GL + YN LI+ C G + A +V +D G+ P
Sbjct: 334 FCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPD 393
Query: 412 KKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHS 471
T +IL D LC +GK E+ +V + + + +TY+ I LC+ +K++ + +
Sbjct: 394 IVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFR 453
Query: 472 ELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIR 525
L+R YI +I G + A +L M+E+G P+ ++ +R
Sbjct: 454 SLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 507
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 165/411 (40%), Gaps = 50/411 (12%)
Query: 325 EVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLI 384
+ F LF +M + + P V VL K D+ I LY G+S + + LI
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 385 NSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVI----FALE 440
+ C A +L + G P TL L + C+ +F++ LV F
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 441 RNIKLRDVTYDKFISALCKA----NKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSN 496
N+ V Y+ I+ LCK N +EV Y + + R + V TY LI G + S
Sbjct: 182 PNV----VIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV----TYNTLISGLSNSG 233
Query: 497 RADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQE------- 549
R AARLL +M + P A+I +T K+ LL + ++E
Sbjct: 234 RWTDAARLLRDMVKRKIDPNVIFFTALI------DTFVKEG-NLLEARNLYKEMIRRSVV 286
Query: 550 TNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRK---NGIPR 606
N YN I+G A+ +++LM G P + + ++ + K K +G+
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM-- 344
Query: 607 KL---------------YNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLL 651
KL YNTLI G C+A K N+A M G+ P + Y L+ L
Sbjct: 345 KLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCL 404
Query: 652 CSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGM 702
C+ + + ++ L+ V N ++ +T L EAW R +
Sbjct: 405 CNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSL 455
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 142/354 (40%), Gaps = 25/354 (7%)
Query: 302 GYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVA 361
G+ P + L++ + NR E L M P+ V NTV+ CK ++ A
Sbjct: 144 GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 203
Query: 362 IELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADA 421
+E++ + G+ + + YN LI+ L G +A +L++ + + P + L D
Sbjct: 204 LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 263
Query: 422 LCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVAS 481
++G + ++L + R++ TY+ I+ C + + +
Sbjct: 264 FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD 323
Query: 482 ENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCN---METPAKQFL 538
TY LI GF KS R + +L EM G + +I C + K F
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 383
Query: 539 QLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYL 598
++++ +S + YN +D + + + A + E +Q+S ++ +I+
Sbjct: 384 RMVDCGVS---PDIVTYNILLDCLCNNGKIEKALVMVEDLQKS----EMDVDIIT----- 431
Query: 599 KRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLC 652
YN +I GLC+ K AW R + G+ P Y +I LC
Sbjct: 432 ----------YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 475
Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 6/149 (4%)
Query: 135 DTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISM 194
+TL+ GY AGK ++A +F +M G+ D Y++LL+ L G + V+ + +
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422
Query: 195 RGFEND-VTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIV--VDALCKNSRF 251
+ D +T I+++ LC+ K+ EA F+ L R+ V I + + LC+
Sbjct: 423 SEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT--RKGVKPDAIAYITMISGLCRKGLQ 480
Query: 252 EQAGKLLEDFKDRDDVVKLEKAYDVWLRN 280
+A KL K+ D + E+ YD LR+
Sbjct: 481 READKLCRRMKE-DGFMPSERIYDETLRD 508
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 86/192 (44%), Gaps = 8/192 (4%)
Query: 619 AMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLE--GHGRQVTS 676
+K + A+ EM + PS+ + ++ ++ +D+V+ + + +E G + S
Sbjct: 57 CIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYS 116
Query: 677 FIGNTLLLHALKTRDLYEAWIRLRG--MLINEQSKISLLGQLIGVFSGCIKVSQDIEGLQ 734
F T+L+H + L G M + + I LG L+ F + + + +
Sbjct: 117 F---TILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVD 173
Query: 735 KMIEQCFPLDTYTYNILLRRLSVS-EIDHACELFNRMRRKGYEPDQWTFDILKCGLYNCL 793
M F + YN ++ L + ++++A E+F M +KG D T++ L GL N
Sbjct: 174 SMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSG 233
Query: 794 RTDEAERRLEEM 805
R +A R L +M
Sbjct: 234 RWTDAARLLRDM 245
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 152/728 (20%), Positives = 288/728 (39%), Gaps = 72/728 (9%)
Query: 71 KKTKDVLSCLKFFDWAGRQPHFHHTRATFHAIFKLLHCAKLTPLMVDFLENYKKDRYYHQ 130
K KD + L+ F+ ++ F HT +T+ ++ + L M + L + +++ H
Sbjct: 15 KCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHM 74
Query: 131 VRFNDTLVM-GYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVS 189
+ M Y GK A+++F +M F + ++Y+ +++ LV+ G FD V
Sbjct: 75 LEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVY 134
Query: 190 KQISMRGFENDV-TRTIMLKCLCKQKKIDEAVEYFQQLVSGREC---VSGF--MIGIVVD 243
++ RG DV + TI +K CK + A+ + S + C V + ++G +
Sbjct: 135 MRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNM-SSQGCEMNVVAYCTVVGGFYE 193
Query: 244 ALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGY 303
K +E GK+L V ++ LR L + G + E L K G
Sbjct: 194 ENFKAEGYELFGKMLA-----SGVSLCLSTFNKLLRVLCKKGDVK-ECEKLLDKVIKRGV 247
Query: 304 VPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCK-AGMVDVAI 362
+P +F +N + L + L + + E PD +T N ++ CK + + +
Sbjct: 248 LPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEV 307
Query: 363 ELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADAL 422
L K +E GL P+ YN LI C G A ++ +++ +G P + T L D L
Sbjct: 308 YLGKMVNE-GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGL 366
Query: 423 CRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASE 482
C +G+ + L AL + IK + Y+ I L + + +E+S +
Sbjct: 367 CHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEV 426
Query: 483 NTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLN 542
T+ L++G K A L+ M G+ P +I + + + L++L+
Sbjct: 427 QTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY-STQLKMENALEILD 485
Query: 543 MQLSHQ-ETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRK 601
+ L + + + YN ++G + + Y+ M G P L +
Sbjct: 486 VMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFT------------ 533
Query: 602 NGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVV 661
+N L+ LC+ K + A G + EM++ + P + LI C + D
Sbjct: 534 -------FNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAY 586
Query: 662 GVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQSKISLLGQLIGVFS 721
+ +E + +S +++HA E+ +++ +L
Sbjct: 587 TLFRKMEEAYKVSSSTPTYNIIIHAF-----------------TEKLNVTMAEKL----- 624
Query: 722 GCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRL-SVSEIDHACELFNRMRRKGYEPDQW 780
Q+M+++C D YTY +++ ++ + M G+ P
Sbjct: 625 -----------FQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLT 673
Query: 781 TFD-ILKC 787
T ++ C
Sbjct: 674 TLGRVINC 681
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 122/528 (23%), Positives = 211/528 (39%), Gaps = 35/528 (6%)
Query: 152 HLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRG-FENDVTRTIMLKCL 210
LFGKM G+ L ++ LL L ++G + ++ RG N T + ++ L
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 211 CKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQA----GKLLEDFKDRDD 266
C++ ++D AV L+ ++ LCKNS+F++A GK++ + + D
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 267 VVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEV 326
Y+ + + G + LA E + G+VP+ F + L+ L E
Sbjct: 322 Y-----TYNTLIAGYCKGGMVQLA-ERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRA 375
Query: 327 FDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINS 386
LF + I P+ + NT++ GM+ A +L SE GL P +N L+N
Sbjct: 376 LALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNG 435
Query: 387 LCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLR 446
LC G +A ++K I G FP T +IL K E +++ L+ +
Sbjct: 436 LCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPD 495
Query: 447 DVTYDKFISALCKANKVEVGYLIHSELSRMNKVASEN--TYIQLIHGFNKSNRADIAARL 504
TY+ ++ LCK +K E ++ + + + K + N T+ L+ + + D A L
Sbjct: 496 VYTYNSLLNGLCKTSKFED--VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL 553
Query: 505 LVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQ-ETNFQIYNFFIDGAG 563
L EM+ P +I C + M+ +++ ++ YN I
Sbjct: 554 LEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFT 613
Query: 564 HVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKAN 623
+A +++ M L P Y ++ G CK N
Sbjct: 614 EKLNVTMAEKLFQEMVDRCLGPD-------------------GYTYRLMVDGFCKTGNVN 654
Query: 624 LAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHG 671
L + F+ EM NG PS+ +I LC G+++ + G
Sbjct: 655 LGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKG 702
Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 144/613 (23%), Positives = 248/613 (40%), Gaps = 77/613 (12%)
Query: 204 TIMLKCLCKQKKIDEAVEYFQQL---VSGRECVSGFMIGIVVDALCKNSRFEQAGKLLED 260
T ++KC QK +A+E F + V + +S + V++ L +FE ++L D
Sbjct: 11 TAVIKC---QKDPMKALEMFNSMRKEVGFKHTLSTYRS--VIEKLGYYGKFEAMEEVLVD 65
Query: 261 FKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKE 320
++ LE Y ++N R G++ A+ + + + P VF +N ++S L+
Sbjct: 66 MRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCE-PTVFSYNAIMSVLVDS 124
Query: 321 NRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVY 380
+ ++M M++ I+PD + + FCK A+ L + S G N + Y
Sbjct: 125 GYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAY 184
Query: 381 NYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALE 440
++ + E YE+ + G+ T + L LC+ G ++ + L+ ++
Sbjct: 185 CTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIK 244
Query: 441 RNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADI 500
R + TY+ FI LC+ +++ + L TY LI+G K+++
Sbjct: 245 RGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQE 304
Query: 501 AARLLVEMEENGHKPTRALHRAVIRCLC--NMETPAKQFL--QLLNMQLSHQETNFQIYN 556
A L +M G +P + +I C M A++ + + N + Q T Y
Sbjct: 305 AEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFT----YR 360
Query: 557 FFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGL 616
IDG H + A A++ G+ P N++ LYNTLI GL
Sbjct: 361 SLIDGLCHEGETNRALALFNEALGKGIKP----NVI---------------LYNTLIKGL 401
Query: 617 CKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCS---TKNYDMVVGVMNHLEGHGRQ 673
A EM G+ P ++ + L+ LC + D +V VM +G+
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS-KGYFPD 460
Query: 674 VTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQSKISLLGQLIGVFSGCIKVSQDIEGL 733
+ +F +L+H T+ +K+ +E L
Sbjct: 461 IFTF---NILIHGYSTQ---------------------------------LKMENALEIL 484
Query: 734 QKMIEQCFPLDTYTYNILLRRL-SVSEIDHACELFNRMRRKGYEPDQWTFDILKCGLYNC 792
M++ D YTYN LL L S+ + E + M KG P+ +TF+IL L
Sbjct: 485 DVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRY 544
Query: 793 LRTDEAERRLEEM 805
+ DEA LEEM
Sbjct: 545 RKLDEALGLLEEM 557
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 171/421 (40%), Gaps = 45/421 (10%)
Query: 135 DTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISM 194
+ L+ G K A GKM +G++ D Y Y+ L+ + G +
Sbjct: 290 NNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVF 349
Query: 195 RGFEND-VTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQ 253
GF D T ++ LC + + + A+ F + + + + ++ L +
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILE 409
Query: 254 AGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFL 313
A +L + ++ + +++ +++ + L + G + A +K S +GY P++F FN L
Sbjct: 410 AAQLANEMSEKGLIPEVQ-TFNILVNGLCKMGCVSDADGLVKVMIS-KGYFPDIFTFNIL 467
Query: 314 V---SRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSE 370
+ S LK +E+ D+ +D + PD T N++L CK + +E YK+ E
Sbjct: 468 IHGYSTQLKMENALEILDVMLD---NGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE 524
Query: 371 FGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGK--- 427
G +PN +N L+ SLC EA +L+ + + P T L D C++G
Sbjct: 525 KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDG 584
Query: 428 ----FEQMKD------------LVIFA-----------------LERNIKLRDVTYDKFI 454
F +M++ ++I A ++R + TY +
Sbjct: 585 AYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Query: 455 SALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHK 514
CK V +GY E+ + S T ++I+ +R AA ++ M + G
Sbjct: 645 DGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLV 704
Query: 515 P 515
P
Sbjct: 705 P 705
Score = 83.2 bits (204), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 117/285 (41%), Gaps = 37/285 (12%)
Query: 127 YYHQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVA 186
Y+ + + L+ GY+ K + AL + M G+D D Y Y+ LLN L + F+ V
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 187 VVSKQISMRG-FENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDAL 245
K + +G N T I+L+ LC+ +K+DEA+ +++ + G ++D
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGF 576
Query: 246 CKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVP 305
CKN + A L K+E+AY V
Sbjct: 577 CKNGDLDGAYTLFR---------KMEEAYKVS---------------------------S 600
Query: 306 EVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELY 365
+N ++ ++ + LF +M + + PDG T ++ FCK G V++ +
Sbjct: 601 STPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFL 660
Query: 366 KSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFP 410
E G P+ +IN LC + +EA ++ + GL P
Sbjct: 661 LEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 134/565 (23%), Positives = 230/565 (40%), Gaps = 70/565 (12%)
Query: 136 TLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMR 195
+LV G GK + AL+L ++ G+ + + Y+ L+++L + F ++ ++
Sbjct: 337 SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKI 396
Query: 196 GFE-NDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQA 254
G NDVT +I++ C++ K+D A+ + ++V +S + +++ CK A
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 255 GKLLEDFKDRDDVVKLEKA---YDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFN 311
+ + ++ KLE Y + G+++ AL L + + +G P ++ F
Sbjct: 457 EGFMAEMINK----KLEPTVVTYTSLMGGYCSKGKINKALR-LYHEMTGKGIAPSIYTFT 511
Query: 312 FLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEF 371
L+S L + + + LF +M E + P+ VT N ++ +C+ G + A E K +E
Sbjct: 512 TLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK 571
Query: 372 GLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTL-----SILADALCRDG 426
G+ P+ Y LI+ LC G EA K +D GL G L + L CR+G
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEA----KVFVD-GLHKGNCELNEICYTGLLHGFCREG 626
Query: 427 KFEQMK-------------DLVIFAL----------------------ERNIKLRDVTYD 451
K E+ DLV + + +R +K DV Y
Sbjct: 627 KLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYT 686
Query: 452 KFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEEN 511
I A K + + I + V +E TY +I+G K+ + A L +M+
Sbjct: 687 SMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPV 746
Query: 512 GHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLA 571
P + + + L E ++ ++L N L N YN I G R + A
Sbjct: 747 SSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEA 806
Query: 572 RAVYELMQRSGLVPQLGSNILMLQSYLKRKN--------------GI--PRKLYNTLIVG 615
+ M G+ P + M+ +R + GI R YNTLI G
Sbjct: 807 SELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHG 866
Query: 616 LCKAMKANLAWGFMREMRHNGMYPS 640
C A + A EM G+ P+
Sbjct: 867 CCVAGEMGKATELRNEMLRQGLIPN 891
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 159/687 (23%), Positives = 274/687 (39%), Gaps = 50/687 (7%)
Query: 149 IALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRGFE-NDVTRTIML 207
+A+ LF M G+ D Y Y ++ +L E + + G + N V +++
Sbjct: 210 LAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLI 269
Query: 208 KCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRDDV 267
LCK++K+ EAV + L +V LCK FE +++ D++
Sbjct: 270 DGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMM------DEM 323
Query: 268 VKL-----EKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENR 322
+ L E A + L + G+++ AL +K G P +F +N L+ L K +
Sbjct: 324 LCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDF-GVSPNLFVYNALIDSLCKGRK 382
Query: 323 LMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNY 382
E LF M + + P+ VT + ++ FC+ G +D A+ + GL + YN
Sbjct: 383 FHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442
Query: 383 LINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERN 442
LIN C G A + I+ L P T + L C GK + L +
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 443 IKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAA 502
I T+ +S L +A + + +E++ N + TY +I G+ + A
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAF 562
Query: 503 RLLVEMEENGHKPTRALHRAVIR--CLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFID 560
L EM E G P +R +I CL + AK F+ + + E N Y +
Sbjct: 563 EFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD--GLHKGNCELNEICYTGLLH 620
Query: 561 GAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKN-----GIPRKL------- 608
G + + A +V + M + G+ L +++ LK K+ G+ +++
Sbjct: 621 GFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKP 680
Query: 609 ----YNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCS---TKNYDMVV 661
Y ++I K A+G M + G P+ Y +I LC +++
Sbjct: 681 DDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLC 740
Query: 662 GVMNHLEGHGRQVTSFIGNTLLLHA----LKTRDLYEAWIRLRGMLINEQSKISLLGQLI 717
M + QVT +L K +L+ A L+G+L N + LI
Sbjct: 741 SKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI--LKGLLANTAT----YNMLI 794
Query: 718 GVFSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRLSV-SEIDHACELFNRMRRKGYE 776
F ++ + E + +MI D TY ++ L +++ A EL+N M KG
Sbjct: 795 RGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIR 854
Query: 777 PDQWTFDILKCGLYNCLRTDEAERRLE 803
PD+ ++ L ++ C E + E
Sbjct: 855 PDRVAYNTL---IHGCCVAGEMGKATE 878
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 157/681 (23%), Positives = 257/681 (37%), Gaps = 126/681 (18%)
Query: 156 KMRFQGMDL--DDYAYHVLLNALVEQGCFD-AVAVVSKQISMRGFENDVTRTIMLKCLCK 212
K G DL D Y L+ L + F+ + ++ + + +R ++ + +++ L K
Sbjct: 285 KKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRK 344
Query: 213 QKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRDDVVKLEK 272
+ KI+EA+ +++V + F+ ++D+LCK +F +A +LL D + + +
Sbjct: 345 RGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA-ELLFDRMGKIGLRPNDV 403
Query: 273 AYDVWLRNLVRAGRLDLALEFLKSK------------NSL-------------EGYV--- 304
Y + + R G+LD AL FL NSL EG++
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEM 463
Query: 305 ------PEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMV 358
P V + L+ + ++ + L+ +M I+P T T+L +AG++
Sbjct: 464 INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLI 523
Query: 359 DVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSIL 418
A++L+ +E+ + PN + YN +I C +G +A+E LK + G+ P + L
Sbjct: 524 RDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583
Query: 419 ADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNK 478
LC G+ + K V + N +L ++ Y + C+ K+E + E+ +
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Query: 479 VASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFL 538
Y LI G K + LL EM + G KP
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDV-------------------- 683
Query: 539 QLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYL 598
IY ID A +++LM G VP
Sbjct: 684 ---------------IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN------------ 716
Query: 599 KRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYD 658
Y +I GLCKA N A +M+ P+ Y + +L + D
Sbjct: 717 -------EVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDIL-TKGEVD 768
Query: 659 MVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIR--LRGMLINEQSKISLLGQL 716
M V H N +L L Y IR R I E S+ L+ ++
Sbjct: 769 MQKAVELH-------------NAILKGLLANTATYNMLIRGFCRQGRIEEASE--LITRM 813
Query: 717 IG--VFSGCIK-------------VSQDIEGLQKMIEQCFPLDTYTYNILLRRLSVS-EI 760
IG V CI V + IE M E+ D YN L+ V+ E+
Sbjct: 814 IGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEM 873
Query: 761 DHACELFNRMRRKGYEPDQWT 781
A EL N M R+G P+ T
Sbjct: 874 GKATELRNEMLRQGLIPNNKT 894
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 176/775 (22%), Positives = 298/775 (38%), Gaps = 103/775 (13%)
Query: 80 LKFFDWAGRQPHFHHTRATF----HAIFK---------------------------LLHC 108
L+FF++ G F H+ A+F HA+ K L C
Sbjct: 88 LRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSC 147
Query: 109 AKLTPLMVD-----FLENYKKDR-----------------YYHQVRFNDTLVMGYALAGK 146
+ L +++Y + R +VR L+ G
Sbjct: 148 YEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRH 207
Query: 147 PDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRGFE-NDVTRTI 205
+A+ LF M G+ D Y Y ++ +L E + + G + N V +
Sbjct: 208 FGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNV 267
Query: 206 MLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRD 265
++ LCK++K+ EAV + L +V LCK FE +++ D
Sbjct: 268 LIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMM------D 321
Query: 266 DVVKL-----EKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKE 320
+++ L E A + L + G+++ AL +K G P +F +N L+ L K
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDF-GVSPNLFVYNALIDSLCKG 380
Query: 321 NRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVY 380
+ E LF M + + P+ VT + ++ FC+ G +D A+ + GL + Y
Sbjct: 381 RKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPY 440
Query: 381 NYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALE 440
N LIN C G A + I+ L P T + L C GK + L
Sbjct: 441 NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500
Query: 441 RNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADI 500
+ I T+ +S L +A + + +E++ N + TY +I G+ +
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK 560
Query: 501 AARLLVEMEENGHKPTRALHRAVIR--CLCNMETPAKQFLQLLNMQLSHQETNFQIYNFF 558
A L EM E G P +R +I CL + AK F+ + + E N Y
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD--GLHKGNCELNEICYTGL 618
Query: 559 IDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCK 618
+ G + + A +V + M + G+ L +++ LK K+ RKL+
Sbjct: 619 LHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD---RKLF--------- 666
Query: 619 AMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFI 678
+G ++EM G+ P Y +I T ++ G+ + + G V + +
Sbjct: 667 -------FGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG-CVPNEV 718
Query: 679 GNTLLLHAL-KTRDLYEAWIRLRGMLINEQSKISLLGQLI-GVF-----SGCIKVSQDIE 731
T +++ L K + EA + M Q S+ Q+ G F G + + + +E
Sbjct: 719 TYTAVINGLCKAGFVNEAEVLCSKM----QPVSSVPNQVTYGCFLDILTKGEVDMQKAVE 774
Query: 732 GLQKMIEQCFPLDTYTYNILLRRLS-VSEIDHACELFNRMRRKGYEPDQWTFDIL 785
L I + +T TYN+L+R I+ A EL RM G PD T+ +
Sbjct: 775 -LHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTM 828
Score = 93.2 bits (230), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 162/425 (38%), Gaps = 40/425 (9%)
Query: 136 TLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCF-DAVAVVSKQISM 194
+L+ GY GK + AL L+ +M +G+ Y + LL+ L G DAV + ++
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW 536
Query: 195 RGFENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQA 254
N VT +M++ C++ + +A E+ +++ + ++ LC + +A
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Query: 255 GKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLV 314
K+ D + + E Y L R G+L+ AL + G ++ + L+
Sbjct: 597 -KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQ-RGVDLDLVCYGVLI 654
Query: 315 SRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLS 374
LK F L +M + + PD V +++ K G A ++ G
Sbjct: 655 DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV 714
Query: 375 PNGIVYNYLINSLCGDGSTHEAYEVL---------------------------------- 400
PN + Y +IN LC G +EA EVL
Sbjct: 715 PNEVTYTAVINGLCKAGFVNEA-EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAV 773
Query: 401 --KNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALC 458
N+I GL T ++L CR G+ E+ +L+ + + +TY I+ LC
Sbjct: 774 ELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELC 833
Query: 459 KANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRA 518
+ N V+ + + ++ Y LIHG + A L EM G P
Sbjct: 834 RRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNK 893
Query: 519 LHRAV 523
R
Sbjct: 894 TSRTT 898
Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 157/383 (40%), Gaps = 44/383 (11%)
Query: 121 NYKKDRYYHQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQG 180
N K +R + V ++ GY G A +M +G+ D Y+Y L++ L G
Sbjct: 537 NVKPNRVTYNV-----MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG 591
Query: 181 CFDAVAVVSKQISMRGFE-NDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIG 239
V + E N++ T +L C++ K++EA+ Q++V + G
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651
Query: 240 IVVDALCKNSRFEQAGKLLEDFKDR----DDVV------------KLEKAYDVWLRNLVR 283
+++D K+ + LL++ DR DDV+ ++A+ +W
Sbjct: 652 VLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW------ 705
Query: 284 AGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGV 343
DL + EG VP + +++ L K + E L M+ P+ V
Sbjct: 706 ----DLMIN--------EGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQV 753
Query: 344 TMNTVLCFFCKAGMVDV--AIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLK 401
T L K G VD+ A+EL+ + + GL N YN LI C G EA E++
Sbjct: 754 TYGCFLDILTK-GEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELIT 811
Query: 402 NSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKAN 461
I G+ P T + + + LCR ++ +L E+ I+ V Y+ I C A
Sbjct: 812 RMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAG 871
Query: 462 KVEVGYLIHSELSRMNKVASENT 484
++ + +E+ R + + T
Sbjct: 872 EMGKATELRNEMLRQGLIPNNKT 894
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 150/656 (22%), Positives = 276/656 (42%), Gaps = 62/656 (9%)
Query: 173 LNALVEQGCF-DAVAVVSKQISMRGFENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRE 231
L+ALV++ +A + S+ +++ ++VT ++++ +++K EA+E + +
Sbjct: 205 LSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGA 264
Query: 232 CVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLAL 291
+ + V A CK A LL + K++ V ++ Y + V+ G +D A+
Sbjct: 265 EPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAI 324
Query: 292 EFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCF 351
LK + +G V L++ K N L+ LF M++ SP+ VT + ++ +
Sbjct: 325 R-LKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEW 383
Query: 352 FCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPG 411
F K G ++ A+E YK GL+P+ + +I EA ++ S + GL
Sbjct: 384 FRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANV 443
Query: 412 KKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHS 471
+IL+ LC+ GK ++ +L+ R I V+Y+ + C+ +++ ++ S
Sbjct: 444 FVCNTILS-WLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFS 502
Query: 472 ELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNME 531
+ + TY LI G +++ A ++ M + + +++ +I LC +
Sbjct: 503 NILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVG 562
Query: 532 TPAKQFLQLLNM-QLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSN 590
+K L NM + + YN IDG D A A YE M +G+ P N
Sbjct: 563 QTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISP----N 618
Query: 591 ILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKL 650
++ Y +L+ GLCK + + A EM++ G+ + Y LI
Sbjct: 619 VIT---------------YTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDG 663
Query: 651 LCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTL------LLHALKTRDLYEAWIR------ 698
C N + + + L G + I N+L L + + DLY+ ++
Sbjct: 664 FCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCD 723
Query: 699 -------LRGMLINEQ----SKISLLGQLIGVFSGCIKVSQDIEGLQ---------KMIE 738
+ G+L + S++ Q +G+ I + + GL KM E
Sbjct: 724 LGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFE 783
Query: 739 QCFPLDTYTYNILLRRLSVS------EIDHACELFNRMRRKGYEPDQWTFDILKCG 788
+ + T N+L+ ++ +D A L + M KG PD TFDIL G
Sbjct: 784 E-MKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 134/569 (23%), Positives = 214/569 (37%), Gaps = 100/569 (17%)
Query: 168 AYHVLLNALVEQGCFD-AVAVVSKQISMRGFENDVTRTIMLKCLCKQKKIDEAVEYFQQL 226
Y ++ A V+QG D A+ + + +S N V T ++ CK + A+ F ++
Sbjct: 306 TYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKM 365
Query: 227 VSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGR 286
+ ++++ W R + G
Sbjct: 366 EKEGPSPNSVTFSVLIE---------------------------------WFR---KNGE 389
Query: 287 LDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMN 346
++ ALEF K L G P VF + ++ LK + E LF + E ++ + N
Sbjct: 390 MEKALEFYKKMEVL-GLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCN 447
Query: 347 TVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDH 406
T+L + CK G D A EL G+ PN + YN ++ C + A V N ++
Sbjct: 448 TILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEK 507
Query: 407 GLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCK------- 459
GL P T SIL D R+ + ++V NI++ V Y I+ LCK
Sbjct: 508 GLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKA 567
Query: 460 ----ANKVEV---------------GYLIHSELSRMNKVASEN----------TYIQLIH 490
AN +E G+ E+ E TY L++
Sbjct: 568 RELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMN 627
Query: 491 GFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLC---NMETPAKQFLQLLNMQLSH 547
G K+NR D A + EM+ G K + A+I C NME+ + F +LL L+
Sbjct: 628 GLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNP 687
Query: 548 QETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRK 607
+ IYN I G ++ A +Y+ M + GL LG+
Sbjct: 688 SQP---IYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGT------------------ 726
Query: 608 LYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHL 667
Y TLI GL K LA EM+ G+ P Y ++ L + VV + +
Sbjct: 727 -YTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEM 785
Query: 668 EGHGRQVTSFIGNTLLLHALKTRDLYEAW 696
+ + I N ++ + +L EA+
Sbjct: 786 KKNNVTPNVLIYNAVIAGHYREGNLDEAF 814
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 105/494 (21%), Positives = 186/494 (37%), Gaps = 54/494 (10%)
Query: 136 TLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMR 195
+L+ G+ AL LF KM +G + + VL+ + G + K++ +
Sbjct: 344 SLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVL 403
Query: 196 GFENDVTRT-IMLKCLCKQKKIDEAVEYF-QQLVSGRECVSGFMIGIVVDALCKNSRFEQ 253
G V +++ K +K +EA++ F + +G V F+ ++ LCK + ++
Sbjct: 404 GLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANV--FVCNTILSWLCKQGKTDE 461
Query: 254 AGKLLEDFKDR---DDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLE-GYVPEVFR 309
A +LL + R +VV +Y+ + R +DLA N LE G P +
Sbjct: 462 ATELLSKMESRGIGPNVV----SYNNVMLGHCRQKNMDLARIVFS--NILEKGLKPNNYT 515
Query: 310 FNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGM------------ 357
++ L+ + + ++ M I +GV T++ CK G
Sbjct: 516 YSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMI 575
Query: 358 ------------------------VDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGST 393
+D A+ Y+ G+SPN I Y L+N LC +
Sbjct: 576 EEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRM 635
Query: 394 HEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKF 453
+A E+ + G+ L D C+ E L LE + Y+
Sbjct: 636 DQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSL 695
Query: 454 ISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGH 513
IS + ++ ++ + TY LI G K +A+ L EM+ G
Sbjct: 696 ISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGL 755
Query: 514 KPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARA 573
P ++ ++ L K M+ ++ N IYN I AGH + +L A
Sbjct: 756 VPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVI--AGHYREGNLDEA 813
Query: 574 --VYELMQRSGLVP 585
+++ M G++P
Sbjct: 814 FRLHDEMLDKGILP 827
Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 159/368 (43%), Gaps = 15/368 (4%)
Query: 131 VRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCF------DA 184
V +N+ + +G+ D+A +F + +G+ ++Y Y +L++ GCF +A
Sbjct: 479 VSYNNVM-LGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILID-----GCFRNHDEQNA 532
Query: 185 VAVVSKQISMRGFENDVTRTIMLKCLCKQKKIDEAVEYFQQLVS-GRECVSGFMIGIVVD 243
+ VV+ S N V ++ LCK + +A E ++ R CVS ++D
Sbjct: 533 LEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIID 592
Query: 244 ALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGY 303
K + A E+ + + Y + L + R+D ALE ++ + +G
Sbjct: 593 GFFKEGEMDSAVAAYEEMCG-NGISPNVITYTSLMNGLCKNNRMDQALE-MRDEMKNKGV 650
Query: 304 VPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIE 363
++ + L+ K + + LF ++ E ++P N+++ F G + A++
Sbjct: 651 KLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALD 710
Query: 364 LYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALC 423
LYK + GL + Y LI+ L DG+ A E+ GL P + +++ + L
Sbjct: 711 LYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLS 770
Query: 424 RDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASEN 483
+ G+F ++ + + N+ + Y+ I+ + ++ + +H E+ +
Sbjct: 771 KKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGA 830
Query: 484 TYIQLIHG 491
T+ L+ G
Sbjct: 831 TFDILVSG 838
Score = 69.7 bits (169), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 128/291 (43%), Gaps = 37/291 (12%)
Query: 136 TLVMGYALAGKPDIALHLFGKM-RFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISM 194
T++ G G+ A L M + + + +Y+ +++ ++G D+ +++
Sbjct: 553 TIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCG 612
Query: 195 RGFE-NDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQ 253
G N +T T ++ LCK ++D+A+E ++ + + G ++D CK S E
Sbjct: 613 NGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMES 672
Query: 254 AGKLLED-------------------FKDRDDVV-------KLEK--------AYDVWLR 279
A L + F++ ++V K+ K Y +
Sbjct: 673 ASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLID 732
Query: 280 NLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQIS 339
L++ G L LA E ++ G VP+ + +V+ L K+ + ++V +F +MK+ ++
Sbjct: 733 GLLKDGNLILASELYTEMQAV-GLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVT 791
Query: 340 PDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGD 390
P+ + N V+ + G +D A L+ + G+ P+G ++ L++ G+
Sbjct: 792 PNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGN 842
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 116/518 (22%), Positives = 194/518 (37%), Gaps = 60/518 (11%)
Query: 310 FNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRS 369
FN+L++ K+ + D+ M E + P +N L + + A ELY
Sbjct: 166 FNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMV 225
Query: 370 EFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFE 429
G+ + + L+ + + EA EVL +I+ G P S+ A C+
Sbjct: 226 AIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCK----- 280
Query: 430 QMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLI 489
DL + N LR++ K LC V S+ TY +I
Sbjct: 281 -TLDLAM----ANSLLREMKEKK----LC--------------------VPSQETYTSVI 311
Query: 490 HGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQE 549
K D A RL EM +G ++I C + M+
Sbjct: 312 LASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPS 371
Query: 550 TNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLK-RKNGIPRKL 608
N ++ I+ + A Y+ M+ GL P + ++Q +LK +K+ KL
Sbjct: 372 PNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKL 431
Query: 609 Y--------------NTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCST 654
+ NT++ LCK K + A + +M G+ P++ Y ++ C
Sbjct: 432 FDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQ 491
Query: 655 KNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQSKISLLG 714
KN D+ V +++ G + ++ + L+ + D A + M S I + G
Sbjct: 492 KNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHM---TSSNIEVNG 548
Query: 715 QLI-GVFSGCIKVSQDI---EGLQKMIEQ---CFPLDTYTYNILLRRLSVSEIDHACELF 767
+ + +G KV Q E L MIE+ C +Y +I+ E+D A +
Sbjct: 549 VVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYN-SIIDGFFKEGEMDSAVAAY 607
Query: 768 NRMRRKGYEPDQWTFDILKCGLYNCLRTDEAERRLEEM 805
M G P+ T+ L GL R D+A +EM
Sbjct: 608 EEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 123 bits (308), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 131/617 (21%), Positives = 254/617 (41%), Gaps = 30/617 (4%)
Query: 79 CLKFFDWAGRQPHFHHT--RATFHAIFKLLHCAKLTPLMVDFLENYKKDRYYHQVRFNDT 136
L+ FDW +Q + + I +L + ++D + V +
Sbjct: 154 ALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTS 213
Query: 137 LVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGC-FDAVAVVSKQISMR 195
L+ +A +G+ A+++F KM G Y+V+LN + G ++ + + +++
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273
Query: 196 GFENDV-TRTIMLKCLCKQKKI-DEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQ 253
G D T ++ C CK+ + EA + F+++ + ++D K+ R ++
Sbjct: 274 GIAPDAYTYNTLITC-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332
Query: 254 AGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFL 313
A K+L + + Y+ + R G LD A+E LK++ + +G P+VF + L
Sbjct: 333 AMKVLNEMV-LNGFSPSIVTYNSLISAYARDGMLDEAME-LKNQMAEKGTKPDVFTYTTL 390
Query: 314 VSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGL 373
+S + ++ +F +M+ P+ T N + + G ++++ + GL
Sbjct: 391 LSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGL 450
Query: 374 SPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKD 433
SP+ + +N L+ +G E V K G P ++T + L A R G FEQ
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510
Query: 434 LVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFN 493
+ L+ + TY+ ++AL + E + +E+ +E TY L+H +
Sbjct: 511 VYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA 570
Query: 494 KSNRADIAARLLVEMEENGHKPTRALHRA-VIRCL-CNMETPAKQ-FLQLLNMQLSHQET 550
+ L E+ +P L + V+ C C++ A++ F +L S T
Sbjct: 571 NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDIT 630
Query: 551 NFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGS-NILML----QSYLKRKNGIP 605
N + G + A V + M+ G P + + N LM + + I
Sbjct: 631 TL---NSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEIL 687
Query: 606 RKL-----------YNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCST 654
R++ YNT+I C+ + A EMR++G+ P + Y I +
Sbjct: 688 REILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAAD 747
Query: 655 KNYDMVVGVMNHLEGHG 671
++ +GV+ ++ HG
Sbjct: 748 SMFEEAIGVVRYMIKHG 764
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 119/546 (21%), Positives = 213/546 (39%), Gaps = 78/546 (14%)
Query: 153 LFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRGFEND-VTRTIMLKCLC 211
L KM+ G+ D Y Y+ L+ A V +++ GF D VT +L
Sbjct: 266 LVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYG 325
Query: 212 KQKKIDEAVEYFQQLVSGRECVSGFMIGIV-----VDALCKNSRFEQAGKLLEDFKDR-- 264
K + EA++ ++V ++GF IV + A ++ ++A +L ++
Sbjct: 326 KSHRPKEAMKVLNEMV-----LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT 380
Query: 265 -DDVVKLEKAYDVWLRNLVRAGRLDLALE-FLKSKNSLEGYVPEVFRFNFLVSRLLKENR 322
DV Y L RAG+++ A+ F + +N+ G P + FN + +
Sbjct: 381 KPDVF----TYTTLLSGFERAGKVESAMSIFEEMRNA--GCKPNICTFNAFIKMYGNRGK 434
Query: 323 LMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNY 382
E+ +F ++ +SPD VT NT+L F + GM ++K G P +N
Sbjct: 435 FTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNT 494
Query: 383 LINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERN 442
LI++ GS +A V + +D G+ P T + + AL R G +EQ + ++ +
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554
Query: 443 IKLRDVTYDKFISALCKANKVEVGYLIHS------------------------------- 471
K ++TY + A AN E+G L+HS
Sbjct: 555 CKPNELTYCSLLHAY--ANGKEIG-LMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLP 611
Query: 472 -------ELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVI 524
EL T ++ + + A +L M+E G P+ A + +++
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Query: 525 RCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLV 584
K L + + + YN I R A ++ M+ SG+V
Sbjct: 672 YMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIV 731
Query: 585 PQLGSNILMLQSY-----LKRKNGIPRKL-----------YNTLIVGLCKAMKANLAWGF 628
P + + + SY + G+ R + YN+++ G CK + + A F
Sbjct: 732 PDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLF 791
Query: 629 MREMRH 634
+ ++R+
Sbjct: 792 VEDLRN 797
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 135/305 (44%), Gaps = 9/305 (2%)
Query: 135 DTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFD-AVAVVSKQIS 193
+TL+ Y+ G + A+ ++ +M G+ D Y+ +L AL G ++ + V+++
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 194 MRGFENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQ 253
R N++T +L K+I +++ SG ++ +V K +
Sbjct: 553 GRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPE 612
Query: 254 AGKLLEDFKDR---DDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRF 310
A + + K+R D+ L ++ R + A + + L+++K + G+ P + +
Sbjct: 613 AERAFSELKERGFSPDITTLNSMVSIYGRRQMVA-KANGVLDYMKER----GFTPSMATY 667
Query: 311 NFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSE 370
N L+ + + ++ ++ I PD ++ NTV+ +C+ + A ++
Sbjct: 668 NSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRN 727
Query: 371 FGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQ 430
G+ P+ I YN I S D EA V++ I HG P + T + + D C+ + ++
Sbjct: 728 SGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDE 787
Query: 431 MKDLV 435
K V
Sbjct: 788 AKLFV 792
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/410 (20%), Positives = 162/410 (39%), Gaps = 7/410 (1%)
Query: 136 TLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMR 195
TL+ G+ AGK + A+ +F +MR G + ++ + +G F + + +I++
Sbjct: 389 TLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVC 448
Query: 196 GFENDVTRTIMLKCLCKQKKIDEAVE-YFQQLVSGRECVSGFMIGIVVDALCKNSRFEQA 254
G D+ L + Q +D V F+++ ++ A + FEQA
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 255 GKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYV-PEVFRFNFL 313
+ D L Y+ L L R G + + + L +G P + L
Sbjct: 509 MTVYRRMLDAGVTPDLS-TYNTVLAALARGGMWEQSEKVLAEME--DGRCKPNELTYCSL 565
Query: 314 VSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGL 373
+ + + L ++ G I P V + T++ K ++ A + E G
Sbjct: 566 LHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 625
Query: 374 SPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKD 433
SP+ N +++ +A VL + G P T + L R F + ++
Sbjct: 626 SPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEE 685
Query: 434 LVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFN 493
++ L + IK ++Y+ I A C+ ++ I SE+ V TY I +
Sbjct: 686 ILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYA 745
Query: 494 KSNRADIAARLLVEMEENGHKPTRALHRAVIRCLC--NMETPAKQFLQLL 541
+ + A ++ M ++G +P + + +++ C N + AK F++ L
Sbjct: 746 ADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 101/515 (19%), Positives = 195/515 (37%), Gaps = 51/515 (9%)
Query: 128 YHQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAV 187
Y +V +N L + Y + +P A+ + +M G Y+ L++A G D
Sbjct: 312 YDKVTYNALLDV-YGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAME 370
Query: 188 VSKQISMRGFENDV-TRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGI-VVDAL 245
+ Q++ +G + DV T T +L + K++ A+ F+++ + +G I +A
Sbjct: 371 LKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN-----AGCKPNICTFNAF 425
Query: 246 CKNSRFEQAGKLLEDFK--DRDDVVKLEKAYDVWLRNLVRAGR--LDLALEFLKSKNSLE 301
K + GK E K D +V L W L G+ +D + + +
Sbjct: 426 IK--MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA 483
Query: 302 GYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVA 361
G+VPE FN L+S + + ++ M + ++PD T NTVL + GM + +
Sbjct: 484 GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQS 543
Query: 362 IELYKSRSEFGLSPNGIVYNYLINSLCGD---GSTHE-AYEVLKNSID------------ 405
++ + PN + Y L+++ G H A EV I+
Sbjct: 544 EKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLV 603
Query: 406 -------------------HGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLR 446
G P TL+ + R + ++ + ER
Sbjct: 604 CSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPS 663
Query: 447 DVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLV 506
TY+ + ++ I E+ +Y +I+ + ++ R A+R+
Sbjct: 664 MATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFS 723
Query: 507 EMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQ-ETNFQIYNFFIDGAGHV 565
EM +G P + I ++ ++ + ++ + H N YN +DG +
Sbjct: 724 EMRNSGIVPDVITYNTFIGSYA-ADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKL 782
Query: 566 KRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKR 600
R D A+ E ++ G ++ +L+ +K+
Sbjct: 783 NRKDEAKLFVEDLRNLDPHAPKGEDLRLLERIVKK 817
Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 121/324 (37%), Gaps = 34/324 (10%)
Query: 484 TYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLN- 542
+Y LI F S R A + +MEE+G KPT + ++ M TP + L+
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 543 MQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKN 602
M+ + YN I A V+E M+ +G SY K
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGF------------SYDK--- 314
Query: 603 GIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVG 662
YN L+ K+ + A + EM NG PS+ Y LI D +
Sbjct: 315 ----VTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAME 370
Query: 663 VMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQSKISLLGQLIGVFSG 722
+ N + G + F TLL + + A M I E+ + + I F+
Sbjct: 371 LKNQMAEKGTKPDVFTYTTLLSGFERAGKVESA------MSIFEEMRNAGCKPNICTFNA 424
Query: 723 CIKVSQDIEGLQKM------IEQC-FPLDTYTYNILLRRLSVSEIDHACE-LFNRMRRKG 774
IK+ + +M I C D T+N LL + +D +F M+R G
Sbjct: 425 FIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 484
Query: 775 YEPDQWTFDILKCGLYNCLRTDEA 798
+ P++ TF+ L C ++A
Sbjct: 485 FVPERETFNTLISAYSRCGSFEQA 508
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 87/206 (42%), Gaps = 15/206 (7%)
Query: 609 YNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKN-YDMVVGVMNHL 667
Y +LI + + A ++M +G P++ Y ++ + ++ + ++ +
Sbjct: 211 YTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKM 270
Query: 668 EGHGRQVTSFIGNTLL-------LHALKTRDLYEAWIRLRGMLINEQSKISLLGQLIGVF 720
+ G ++ NTL+ LH + E ++ G ++ + +LL V+
Sbjct: 271 KSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEE--MKAAGFSYDKVTYNALLD----VY 324
Query: 721 SGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRLSVSE-IDHACELFNRMRRKGYEPDQ 779
+ + ++ L +M+ F TYN L+ + +D A EL N+M KG +PD
Sbjct: 325 GKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Query: 780 WTFDILKCGLYNCLRTDEAERRLEEM 805
+T+ L G + + A EEM
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEM 410
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 122 bits (307), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 126/610 (20%), Positives = 242/610 (39%), Gaps = 63/610 (10%)
Query: 48 DQALSELGIRLTESFALQVLNYGKKTKDVLSCLKFFDWAGRQPHFHHTRATFHAIFKLL- 106
+ +L L + + A QV++ + D+ C++FF W + + + + KL+
Sbjct: 57 NSSLKSLVSHMNPNVASQVISLQRSDNDI--CVRFFMWVCKHSSYCFDPTQKNQLLKLIV 114
Query: 107 -----------------HCAKLTPLMVDFLENYKKDRYYHQVRFN----DTLVMGYALAG 145
C++ M+ + + + R R N +L+M A
Sbjct: 115 SSGLYRVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLD 174
Query: 146 KPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRGF-------- 197
+A + +M G + Y ++NAL + G +A + +I GF
Sbjct: 175 LGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGT 234
Query: 198 -----------------------------ENDVTRTIMLKCLCKQKKIDEAVEYFQQLVS 228
N V+ +I++ LC+ +++EA Q+
Sbjct: 235 SLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGE 294
Query: 229 GRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLD 288
S +++ ALC ++A L ++ R + Y V + L R G+++
Sbjct: 295 KGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVH-TYTVLIDGLCRDGKIE 353
Query: 289 LALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTV 348
A + K + P V +N L++ K+ R++ F+L M++ P+ T N +
Sbjct: 354 EANGVCR-KMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNEL 412
Query: 349 LCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGL 408
+ C+ G A+ L K + GLSP+ + YN LI+ LC +G + AY++L + +
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472
Query: 409 FPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYL 468
P T + + +A C+ GK + + L + I L +VT I +CK K
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF 532
Query: 469 IHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLC 528
I L +M + + ++ ++ +K + +L ++ + G P+ + ++ L
Sbjct: 533 ILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592
Query: 529 NMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLG 588
F L M+LS N Y I+G R + A + MQ SG+ P
Sbjct: 593 RSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHV 652
Query: 589 SNILMLQSYL 598
+ +M++ Y+
Sbjct: 653 TYTVMVKGYV 662
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 193/448 (43%), Gaps = 17/448 (3%)
Query: 165 DDYAYHVLLNALVEQGCFDAVAVVSKQISMRGFENDV-TRTIMLKCLCKQKKIDEAVEYF 223
+ +Y +L++ L E G + + Q+ +G + T T+++K LC + ID+A F
Sbjct: 265 NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLF 324
Query: 224 QQLVSGRECVSGF-MIGIVVDALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLV 282
+++ R C +++D LC++ + E+A + +D + Y+ +
Sbjct: 325 DEMIP-RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMV-KDRIFPSVITYNALINGYC 382
Query: 283 RAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDG 342
+ GR+ A E L P V FN L+ L + + + L M + +SPD
Sbjct: 383 KDGRVVPAFELLTVMEK-RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDI 441
Query: 343 VTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKN 402
V+ N ++ C+ G ++ A +L S + F + P+ + + +IN+ C G A L
Sbjct: 442 VSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGL 501
Query: 403 SIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVT----YDKFISALC 458
+ G+ + T + L D +C+ GK +F LE +K+R +T + + L
Sbjct: 502 MLRKGISLDEVTGTTLIDGVCKVGKTRD----ALFILETLVKMRILTTPHSLNVILDMLS 557
Query: 459 KANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRA 518
K KV+ + +++++ V S TY L+ G +S + R+L M+ +G P
Sbjct: 558 KGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVY 617
Query: 519 LHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELM 578
+ +I LC + L MQ S N Y + G + + D A M
Sbjct: 618 PYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAM 677
Query: 579 QRSGLVPQLGSNIL--MLQSYLKRKNGI 604
G +L I +LQ ++ + GI
Sbjct: 678 VERGY--ELNDRIYSSLLQGFVLSQKGI 703
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 128/580 (22%), Positives = 221/580 (38%), Gaps = 101/580 (17%)
Query: 235 GFMIGIV-----VDALCKNSRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDL 289
GF++G++ V+ALCKN E A ++++ +++ G +
Sbjct: 190 GFVVGMIDYRTIVNALCKNGYTEAA--------------------EMFMSKILKIGFV-- 227
Query: 290 ALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVL 349
L+ ++ F R L ++VFD+ KE +P+ V+ + ++
Sbjct: 228 ----------LDSHIGTSLLLGF--CRGLNLRDALKVFDVM--SKEVTCAPNSVSYSILI 273
Query: 350 CFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLF 409
C+ G ++ A L E G P+ Y LI +LC G +A+ + I G
Sbjct: 274 HGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCK 333
Query: 410 PGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLI 469
P T ++L D LCRDGK E+ + ++ I +TY+ I+ CK +V + +
Sbjct: 334 PNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFEL 393
Query: 470 HSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCN 529
+ + + + T+ +L+ G + + A LL M +NG P + +I LC
Sbjct: 394 LTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCR 453
Query: 530 METPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGS 589
+ L +M E + + I+ + D+A A LM R G+
Sbjct: 454 EGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGI------ 507
Query: 590 NILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMR---EMRHNGMYPSMECYEE 646
L G TLI G+CK K A + +MR S+ +
Sbjct: 508 -------SLDEVTG------TTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILD 554
Query: 647 LIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINE 706
++ C K ++G +N L V S + T L+ L
Sbjct: 555 MLSKGCKVKEELAMLGKINKLG----LVPSVVTYTTLVDGL------------------- 591
Query: 707 QSKISLLGQLIGVFSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRL-SVSEIDHACE 765
+ SG I S I L K+ C P + Y Y I++ L ++ A +
Sbjct: 592 ------------IRSGDITGSFRILELMKL-SGCLP-NVYPYTIIINGLCQFGRVEEAEK 637
Query: 766 LFNRMRRKGYEPDQWTFDILKCGLYNCLRTDEAERRLEEM 805
L + M+ G P+ T+ ++ G N + D A + M
Sbjct: 638 LLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAM 677
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 143/362 (39%), Gaps = 42/362 (11%)
Query: 130 QVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVS 189
VR + L+ G GKP A+HL +M G+ D +Y+VL++ L +G + +
Sbjct: 405 NVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLL 464
Query: 190 KQISMRGFEND-VTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKN 248
++ E D +T T ++ CKQ K D A + ++ + ++D +CK
Sbjct: 465 SSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKV 524
Query: 249 SRFEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVF 308
+ A +LE + ++ + +V L L + ++ L L N L G VP V
Sbjct: 525 GKTRDALFILETLV-KMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKL-GLVPSVV 582
Query: 309 RFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSR 368
+ LV L++ + F + MK
Sbjct: 583 TYTTLVDGLIRSGDITGSFRILELMKLS-------------------------------- 610
Query: 369 SEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKF 428
G PN Y +IN LC G EA ++L D G+ P T +++ +GK
Sbjct: 611 ---GCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKL 667
Query: 429 EQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQL 488
++ + V +ER +L D Y + + K + +SE S ++ +A T +
Sbjct: 668 DRALETVRAMVERGYELNDRIYSSLLQGFVLSQK----GIDNSEESTVSDIALRETDPEC 723
Query: 489 IH 490
I+
Sbjct: 724 IN 725
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 112/515 (21%), Positives = 195/515 (37%), Gaps = 64/515 (12%)
Query: 350 CFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLF 409
C C+ M+ + + R FG N Y+ L+ SL AY + G
Sbjct: 133 CSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFV 192
Query: 410 PGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLI 469
G + +ALC++G E + + L+ L + C+ + +
Sbjct: 193 VGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKV 252
Query: 470 HSELSRMNKVASEN-TYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLC 528
+S+ A + +Y LIHG + R + A L +M E G +P+ + +I+ LC
Sbjct: 253 FDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALC 312
Query: 529 NMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLG 588
+ K F M + N Y IDG + + A V M + + P +
Sbjct: 313 DRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVI 372
Query: 589 SNILMLQSYLKRKNGIPR----------------KLYNTLIVGLCKAMKANLAWGFMREM 632
+ ++ Y K +P + +N L+ GLC+ K A ++ M
Sbjct: 373 TYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRM 432
Query: 633 RHNGMYPSMECYEELI-------------KLLCSTKNYDM------VVGVMNHL--EGHG 671
NG+ P + Y LI KLL S +D+ ++N +G
Sbjct: 433 LDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKA 492
Query: 672 RQVTSFIG-------------NTLLLHAL----KTRD---LYEAWIRLRGMLINEQSKIS 711
++F+G T L+ + KTRD + E +++R +L S
Sbjct: 493 DVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMR-ILTTPHS--- 548
Query: 712 LLGQLIGVFSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRLSVS-EIDHACELFNRM 770
L ++ + S KV +++ L K+ + TY L+ L S +I + + M
Sbjct: 549 -LNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELM 607
Query: 771 RRKGYEPDQWTFDILKCGLYNCLRTDEAERRLEEM 805
+ G P+ + + I+ GL R +EAE+ L M
Sbjct: 608 KLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAM 642
>sp|Q9FNG8|PP366_ARATH Putative pentatricopeptide repeat-containing protein At5g06400,
mitochondrial OS=Arabidopsis thaliana GN=At5g06400 PE=3
SV=1
Length = 1030
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 174/830 (20%), Positives = 330/830 (39%), Gaps = 119/830 (14%)
Query: 80 LKFFDWAGRQPHFHHTRATFHAIFKLLHCAKLTPLMVDFLENYKKDRYYHQVRFNDTLVM 139
++FF+W ++ F H ++ + + A+ ++ + + +K+ +R L+
Sbjct: 173 MRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILIS 232
Query: 140 GYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRGFEN 199
Y A K L +F KMR G +LD AY++++ +L G D K++ +G
Sbjct: 233 VYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITF 292
Query: 200 DV-TRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLL 258
+ T ++L C+ K +K+D +V E G ++ + C + + ++A +L+
Sbjct: 293 GLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELI 352
Query: 259 EDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALE---FLKSKNSLEGYVPEVFRFNFLVS 315
+ K+++ + K +++ ++ L RA R+ ALE +K + + V + ++S
Sbjct: 353 RELKNKEMCLDA-KYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV-----YGIIIS 406
Query: 316 RLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSP 375
L++N + + + F +K+ P T ++ K + L+ E G+ P
Sbjct: 407 GYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEP 466
Query: 376 NGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLV 435
+ + ++ G EA++V + + G+ P K+ SI LCR +++++ +
Sbjct: 467 DSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIF 526
Query: 436 IFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKS 495
I +RD + IS++ K + E +LI R N E N S
Sbjct: 527 NQMHASKIVIRDDIFSWVISSMEKNGEKEKIHLIKEIQKRSNSYCDE---------LNGS 577
Query: 496 NRADIA-ARLLVE-------MEENGHKPT-RALHRAVIRCLCN--------------MET 532
+A+ + LV+ ++++ P A+ + ++ +C +E
Sbjct: 578 GKAEFSQEEELVDDYNCPQLVQQSALPPALSAVDKMDVQEICRVLSSSRDWERTQEALEK 637
Query: 533 PAKQFLQLLNMQ-LSHQET--------------------NFQIYNFFIDGAGHVKRPDLA 571
QF L ++ L H + N + YN I AG K
Sbjct: 638 STVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQM 697
Query: 572 RAVYELMQRSGLVPQLGSNILMLQSY---------------LKRKNGIP-RKLYNTLIVG 615
R+++ M+R G + + +M+ Y +K IP + LI
Sbjct: 698 RSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITV 757
Query: 616 LCKAMKANL--AWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQ 673
LC+ N+ A REM +G P E ++ + LC N ++ L G
Sbjct: 758 LCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFP 817
Query: 674 VT------------------------SFIGNTLLL---------HALKTR-DLYEAWIRL 699
VT SF G LL H L R DL +A ++
Sbjct: 818 VTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKV 877
Query: 700 RGML-INEQSKISLLGQLIGVFSGCIKVSQDIEGLQKMI-EQCFP-LDTYTYNILLRRLS 756
M I + + + LI F ++ + +E QKM E C P + TYT ++ +S
Sbjct: 878 NSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYT-AMICGYMS 936
Query: 757 VSEIDHACELFNRMRRKGYEPDQWTFDILKCGLYNCLRTDEAERRLEEMF 806
+ +++ A F M +G PD T+ L ++++A + L EM
Sbjct: 937 LGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEML 986
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 180/427 (42%), Gaps = 29/427 (6%)
Query: 28 KIFQILSTHDDEDSASRFAADQALSELGIRLTESFALQVLNYGKKTKDVLSCLKFFDWAG 87
+I ++LS+ D + +AL + ++ T ++VL + K + + L+FF W G
Sbjct: 617 EICRVLSSSRDWERTQ-----EALEKSTVQFTPELVVEVLRHAKIQGNAV--LRFFSWVG 669
Query: 88 RQPHFHHTRATFHAIFKLLHCAKLTPLMVDFLENYKKDRYYHQVRFNDTLVMGYALAGKP 147
++ + H ++ K+ C K M ++ ++M Y G
Sbjct: 670 KRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLT 729
Query: 148 DIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGC--FDAVAVVSKQISMRGFENDVTRTI 205
+IA+ F +M+ G+ + L+ L E+ + +++ GF D R +
Sbjct: 730 NIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPD--REL 787
Query: 206 M---LKCLCKQKKIDEAVEYFQQLVSGRECVSGFMI----GIVVDALCKNSRFEQAGKLL 258
+ L CLC+ +A L G+ GF + I + ALC+ + E+A L
Sbjct: 788 VQDYLGCLCEVGNTKDAKSCLDSL--GK---IGFPVTVAYSIYIRALCRIGKLEEALSEL 842
Query: 259 EDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLL 318
F+ ++ + Y + L++ G L AL+ + S + G P V + L+
Sbjct: 843 ASFEGERSLLD-QYTYGSIVHGLLQRGDLQKALDKVNSMKEI-GTKPGVHVYTSLIVYFF 900
Query: 319 KENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGI 378
KE +L +V + M+ P VT ++C + G V+ A +++ E G SP+
Sbjct: 901 KEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFK 960
Query: 379 VYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFA 438
Y+ IN LC + +A ++L +D G+ P + L R+GK DL A
Sbjct: 961 TYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKH----DLARIA 1016
Query: 439 LERNIKL 445
L++ L
Sbjct: 1017 LQKKSAL 1023
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/397 (19%), Positives = 162/397 (40%), Gaps = 56/397 (14%)
Query: 289 LALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTV 348
LA+ F +G+ V +N ++S + L V +L +M++ D T +
Sbjct: 171 LAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTIL 230
Query: 349 LCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGL 408
+ + KA + + +++ + G + YN +I SLC G A E K ++ G+
Sbjct: 231 ISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGI 290
Query: 409 FPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYL 468
G +T +L D + K+ KV+V
Sbjct: 291 TFGLRTYKMLLD-----------------------------------CIAKSEKVDVVQS 315
Query: 469 IHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLC 528
I ++ R+ +++ + + L+ F S + A L+ E++ +++ LC
Sbjct: 316 IADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLC 375
Query: 529 NMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAV--YELMQRSGLVPQ 586
L+++++ + + +Y I +G++++ D+++A+ +E++++SG P+
Sbjct: 376 RANRMVDA-LEIVDIMKRRKLDDSNVYGIII--SGYLRQNDVSKALEQFEVIKKSGRPPR 432
Query: 587 LGSNILMLQSYLKRK--------------NGI-PRKLYNTLIV-GLCKAMKANLAWGFMR 630
+ + ++Q K K NGI P + T +V G + AW
Sbjct: 433 VSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFS 492
Query: 631 EMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHL 667
M G+ P+ + Y +K LC + YD ++ + N +
Sbjct: 493 SMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQM 529
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 109/291 (37%), Gaps = 22/291 (7%)
Query: 352 FCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDG--STHEAYEVLKNSIDHGLF 409
+ + G+ ++AI +K + GL P+ + LI LC + EA + I G
Sbjct: 723 YGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFV 782
Query: 410 PGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLI 469
P ++ + LC G + K + +L + V Y +I ALC+ K+E
Sbjct: 783 PDRELVQDYLGCLCEVGNTKDAKS-CLDSLGKIGFPVTVAYSIYIRALCRIGKLEEALSE 841
Query: 470 HSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCN 529
+ + + TY ++HG + A + M+E G KP ++ ++I
Sbjct: 842 LASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFK 901
Query: 530 METPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGS 589
+ K M+ E + Y I G + + + A + M+ G P
Sbjct: 902 EKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDF-- 959
Query: 590 NILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPS 640
K Y+ I LC+A K+ A + EM G+ PS
Sbjct: 960 -----------------KTYSKFINCLCQACKSEDALKLLSEMLDKGIAPS 993
Score = 39.3 bits (90), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 100/289 (34%), Gaps = 42/289 (14%)
Query: 275 DVWLRNLVRAGRL---DLALEFLKSKNSLEGYVPEVFRFNFLVSRLL--KENRLMEVFDL 329
D W +++ GR ++A+ K + G +P F L++ L K + E
Sbjct: 714 DTWAIMIMQYGRTGLTNIAIRTFKEMKDM-GLIPSSSTFKCLITVLCEKKGRNVEEATRT 772
Query: 330 FMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCG 389
F +M PD + L C+ G A S + G P + Y+ I +LC
Sbjct: 773 FREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCR 831
Query: 390 DGSTHEAYEVLKN--------------SIDHGLF---------------------PGKKT 414
G EA L + SI HGL PG
Sbjct: 832 IGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHV 891
Query: 415 LSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELS 474
+ L ++ + E++ + + + VTY I KVE + +
Sbjct: 892 YTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNME 951
Query: 475 RMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAV 523
TY + I+ ++ +++ A +LL EM + G P+ R V
Sbjct: 952 ERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTV 1000
>sp|Q9LER0|PP381_ARATH Pentatricopeptide repeat-containing protein At5g14770,
mitochondrial OS=Arabidopsis thaliana GN=At5g14770 PE=2
SV=2
Length = 940
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 151/701 (21%), Positives = 287/701 (40%), Gaps = 89/701 (12%)
Query: 153 LFGKMRFQGMDLDDYAYHVLLNALVEQG--CFDAVAVVSKQISMRGFENDVTRTIMLKCL 210
++ KM G+ D +A +VL+++ + G F + ++ IS+ + VT ++ L
Sbjct: 118 IYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISI----DTVTYNTVISGL 173
Query: 211 CKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRDDV--- 267
C+ DEA ++ ++V ++D CK F +A L+++ + + +
Sbjct: 174 CEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHT 233
Query: 268 VKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVF 327
+ L Y++ A+E + G+ P+V F+ +++RL K +++E
Sbjct: 234 ILLSSYYNLH------------AIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGG 281
Query: 328 DLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSL 387
L +M+E + P+ VT T++ KA + A+ LY G+ + +VY L++ L
Sbjct: 282 LLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGL 341
Query: 388 CGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRD 447
G EA + K ++ P T + L D LC+ G + ++ LE+++
Sbjct: 342 FKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNV 401
Query: 448 VTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARL--- 504
VTY I+ K +E + ++ N V + TY +I G K+ + ++A L
Sbjct: 402 VTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKE 461
Query: 505 --LVEMEENGH---------------KPTRAL-----HRAVIRCLCNMETPAKQFLQ--- 539
L+ +EEN + K + L + V N + F +
Sbjct: 462 MRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGD 521
Query: 540 -------LLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNIL 592
MQ + YN I G + A Y+ M+ G+ P + + +
Sbjct: 522 EEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNI 580
Query: 593 MLQSYLKRKN--GI-------------PRKLYNTLIVG-LCKAMKANLAWGFMREMRHNG 636
M+ S K+ + GI P + ++VG LC+ K A + +M
Sbjct: 581 MMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLME 640
Query: 637 MYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLL-----LHALKTRD 691
++P++ Y + K D + L +G +++ + NTL+ L K
Sbjct: 641 IHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAA 700
Query: 692 LYEAWIRLRGMLINEQSKISLLGQLIGVFSGCIKVSQDIEGLQKMIEQCFPLDTYTYNIL 751
+ + RG + + + SL+ G F G V + + M+E + TYN +
Sbjct: 701 MVMGDMEARGFIPDTVTFNSLMH---GYFVGS-HVRKALSTYSVMMEAGISPNVATYNTI 756
Query: 752 LRRLS----VSEIDHACELFNRMRRKGYEPDQWTFDILKCG 788
+R LS + E+D + + M+ +G PD +T++ L G
Sbjct: 757 IRGLSDAGLIKEVD---KWLSEMKSRGMRPDDFTYNALISG 794
Score = 92.8 bits (229), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 112/527 (21%), Positives = 199/527 (37%), Gaps = 70/527 (13%)
Query: 168 AYHVLLNALVEQGCFDAVA-VVSKQISMRGFENDVTRTIMLKCLCKQKKIDEAVEYFQQL 226
Y L++ L + G + ++++ + N VT + M+ K+ ++EAV +++
Sbjct: 368 TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 427
Query: 227 VSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRDDVVKLEK---AYDVWLRNLVR 283
+GF G V+D L K + E A +L ++ + ++ +E+ D + +L R
Sbjct: 428 EDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMR----LIGVEENNYILDALVNHLKR 483
Query: 284 AGRL-----------------------DLALEFLKSKNSL-----------EGYVPEVFR 309
GR+ L F K + G +V
Sbjct: 484 IGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVS 543
Query: 310 FNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRS 369
+N L+S +LK ++ + + M+E I PD T N ++ K G + ++L+
Sbjct: 544 YNVLISGMLKFGKVGADW-AYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMK 602
Query: 370 EFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCR----D 425
G+ P+ + N ++ LC +G EA +L + + P T I D + D
Sbjct: 603 SCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRAD 662
Query: 426 GKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTY 485
F+ + L L IKL Y+ I+ LCK + ++ ++ + T+
Sbjct: 663 AIFKTHETL----LSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTF 718
Query: 486 IQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQL 545
L+HG+ + A M E G P A + +IR L + + L M+
Sbjct: 719 NSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKS 778
Query: 546 SHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIP 605
+ YN I G + + +Y M GLVP+ +
Sbjct: 779 RGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTST---------------- 822
Query: 606 RKLYNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLC 652
YN LI K A ++EM G+ P+ Y +I LC
Sbjct: 823 ---YNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLC 866
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 135/311 (43%), Gaps = 11/311 (3%)
Query: 154 FGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRGFENDVTR-TIMLKCLCK 212
+ MR +G++ D +++++N+ +QG + + + ++ G + + I++ LC+
Sbjct: 563 YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCE 622
Query: 213 QKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRDDVVKLEK 272
K++EA+ Q++ + I +D K+ R + K E +KL +
Sbjct: 623 NGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYG--IKLSR 680
Query: 273 -AYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFM 331
Y+ + L + G A + + G++P+ FN L+ + + + +
Sbjct: 681 QVYNTLIATLCKLGMTKKAAMVMGDMEA-RGFIPDTVTFNSLMHGYFVGSHVRKALSTYS 739
Query: 332 DMKEGQISPDGVTMNTVLCFFCKAGM---VDVAIELYKSRSEFGLSPNGIVYNYLINSLC 388
M E ISP+ T NT++ AG+ VD + KSR G+ P+ YN LI+
Sbjct: 740 VMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSR---GMRPDDFTYNALISGQA 796
Query: 389 GDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDV 448
G+ + + I GL P T ++L GK Q ++L+ +R +
Sbjct: 797 KIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTS 856
Query: 449 TYDKFISALCK 459
TY IS LCK
Sbjct: 857 TYCTMISGLCK 867
Score = 53.1 bits (126), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 87/441 (19%), Positives = 166/441 (37%), Gaps = 73/441 (16%)
Query: 371 FGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNS-IDHGLFPGKKTLSILADALCRDGKFE 429
FG+ P+ ++N LI+ +G H+ ++ + I G+ P L++L + C+ G+
Sbjct: 89 FGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLS 148
Query: 430 QMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLI 489
L+ R I + VTY+ IS LC+
Sbjct: 149 FAISLL---RNRVISIDTVTYNTVISGLCE------------------------------ 175
Query: 490 HGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQE 549
HG AD A + L EM + G P + +I C + F++ + E
Sbjct: 176 HGL-----ADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKV----GNFVRAKALVDEISE 226
Query: 550 TNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLY 609
N + + ++ + A Y M SG P + + +
Sbjct: 227 LNLITHTILLSSYYNLHAIEEA---YRDMVMSGFDPDVVT-------------------F 264
Query: 610 NTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEG 669
+++I LCK K +REM +YP+ Y L+ L Y + + + +
Sbjct: 265 SSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVV 324
Query: 670 HGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQSKISLLGQLIGVFSGCIKVSQD 729
G V + L+ K DL EA + +L E +++ + + G K + D
Sbjct: 325 RGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLL--EDNQVPNVVTYTALVDGLCK-AGD 381
Query: 730 IEG----LQKMIEQCFPLDTYTYNILLR-RLSVSEIDHACELFNRMRRKGYEPDQWTFDI 784
+ + +M+E+ + TY+ ++ + ++ A L +M + P+ +T+
Sbjct: 382 LSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGT 441
Query: 785 LKCGLYNCLRTDEAERRLEEM 805
+ GL+ + + A +EM
Sbjct: 442 VIDGLFKAGKEEMAIELSKEM 462
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/528 (20%), Positives = 220/528 (41%), Gaps = 30/528 (5%)
Query: 135 DTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISM 194
+ L+ G ++A ++ ++ G+ ++ Y ++++NAL + G + V Q+
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 195 RGFEND-VTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQ 253
+G D VT ++ + ++EA E + + V++ LCK+ ++E+
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 254 AGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFL 313
A ++ + R + Y L + G + + E + S VP++ F+ +
Sbjct: 324 AKEVFAEML-RSGLSPDSTTYRSLLMEACKKGDV-VETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 314 VSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGL 373
+S + L + F +KE + PD V ++ +C+ GM+ VA+ L + G
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 374 SPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKD 433
+ + + YN +++ LC EA ++ + LFP TL+IL D C+ G + +
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 434 LVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFN 493
L E+ I+L VTY+ + K ++ I +++ + + +Y L++
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 561
Query: 494 KSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQ 553
A R+ EM KPT + ++I+ C + L M +
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621
Query: 554 IYNFFIDGAGHVKRPDLARAVYELMQR-----SGLVPQLGSNILMLQSYLKRKNGIPRKL 608
YN I G V+ ++++A + L+++ GLVP + +
Sbjct: 622 SYNTLI--YGFVREENMSKA-FGLVKKMEEEQGGLVPDVFT------------------- 659
Query: 609 YNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKN 656
YN+++ G C+ + A +R+M G+ P Y +I S N
Sbjct: 660 YNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDN 707
Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 103/479 (21%), Positives = 202/479 (42%), Gaps = 21/479 (4%)
Query: 118 FLENYKKDRYYHQVRFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALV 177
FL ++ Y + +TL+ Y+ G + A L M +G Y Y+ ++N L
Sbjct: 257 FLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC 316
Query: 178 EQGCFDAVAVVSKQISMRGFENDVT--RTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSG 235
+ G ++ V ++ G D T R+++++ CK+ + E + F + S R+ V
Sbjct: 317 KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA-CKKGDVVETEKVFSDMRS-RDVVPD 374
Query: 236 FM-IGIVVDALCKNSRFEQAGKLLEDFKDR----DDVVKLEKAYDVWLRNLVRAGRLDLA 290
+ ++ ++ ++A K+ D+V+ Y + ++ R G + +A
Sbjct: 375 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI-----YTILIQGYCRKGMISVA 429
Query: 291 LEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLC 350
+ L+++ +G +V +N ++ L K L E LF +M E + PD T+ ++
Sbjct: 430 MN-LRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID 488
Query: 351 FFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFP 410
CK G + A+EL++ E + + + YN L++ G A E+ + + + P
Sbjct: 489 GHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILP 548
Query: 411 GKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVEVGYLIH 470
+ SIL +ALC G + + + +NIK + + I C++ G
Sbjct: 549 TPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFL 608
Query: 471 SELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEE--NGHKPTRALHRAVIRCLC 528
++ V +Y LI+GF + A L+ +MEE G P + +++ C
Sbjct: 609 EKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFC 668
Query: 529 NMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARA--VYELMQRSGLVP 585
+ + L M + Y I+ G V + +L A +++ M + G P
Sbjct: 669 RQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN--GFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 121/574 (21%), Positives = 227/574 (39%), Gaps = 57/574 (9%)
Query: 271 EKAYDVWLRNLVRAGRLDLALE---FLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVF 327
+ +D+ +R V+A +L A E L+SK G+ + N L+ L++ + +
Sbjct: 165 DSVFDLLIRTYVQARKLREAHEAFTLLRSK----GFTVSIDACNALIGSLVRIGWVELAW 220
Query: 328 DLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSL 387
++ ++ + + T+N ++ CK G ++ E G+ P+ + YN LI++
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY 280
Query: 388 CGDGSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRD 447
G EA+E++ G PG T + + + LC+ GK+E+ K++ L +
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340
Query: 448 VTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVE 507
TY + CK V + S++ + V + ++ F +S D A
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400
Query: 508 MEENGHKPTRALHRAVIRCLC--NMETPAKQFLQLLNMQLSHQ-ETNFQIYNFFIDGAGH 564
++E G P ++ +I+ C M + A + L N L + YN + G
Sbjct: 401 VKEAGLIPDNVIYTILIQGYCRKGMISVA---MNLRNEMLQQGCAMDVVTYNTILHGLCK 457
Query: 565 VKRPDLARAVYELMQRSGLVPQLGSNILMLQSYLKRKN-----GIPRKL----------- 608
K A ++ M L P + +++ + K N + +K+
Sbjct: 458 RKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVT 517
Query: 609 YNTLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLE 668
YNTL+ G K + A +M + P+ Y L+ LCS + V + +
Sbjct: 518 YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMI 577
Query: 669 GHGRQVTSFIGNTLLLHALKTRDLYEAWIRLRGMLINEQSKISLLGQLIGVFSGCIKVSQ 728
+ T I N+++ ++ + + L M I+E G CI +
Sbjct: 578 SKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM-ISE-----------GFVPDCISYNT 625
Query: 729 DIEG-------------LQKMIEQCFPL--DTYTYNILLRRLS-VSEIDHACELFNRMRR 772
I G ++KM E+ L D +TYN +L +++ A + +M
Sbjct: 626 LIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIE 685
Query: 773 KGYEPDQWTFDILKCGLYNCLRTDEAERRLEEMF 806
+G PD+ T+ + G + EA R +EM
Sbjct: 686 RGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEML 719
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 130/314 (41%), Gaps = 38/314 (12%)
Query: 137 LVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCFDAVAVVSKQISMRG 196
L+ GY G +A++L +M QG +D Y+ +L+ L ++ + +++ R
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
Query: 197 -FENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAG 255
F + T TI++ CK + A+E FQ++ R + ++D K + A
Sbjct: 476 LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535
Query: 256 KLLEDFKDRDDVVK----------------LEKAYDVW------------------LRNL 281
++ D ++ + L +A+ VW ++
Sbjct: 536 EIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGY 595
Query: 282 VRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLFMDMKE--GQIS 339
R+G FL+ S EG+VP+ +N L+ ++E + + F L M+E G +
Sbjct: 596 CRSGNASDGESFLEKMIS-EGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLV 654
Query: 340 PDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEV 399
PD T N++L FC+ + A + + E G++P+ Y +IN + EA+ +
Sbjct: 655 PDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRI 714
Query: 400 LKNSIDHGLFPGKK 413
+ G P K
Sbjct: 715 HDEMLQRGFSPDDK 728
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 125/540 (23%), Positives = 215/540 (39%), Gaps = 80/540 (14%)
Query: 79 CLKFFDWAGRQPHFHHTRATFHAIFKLLHC---AKLTPLMVDFLENYKKDRYYHQVR--- 132
CL+++ W + + FKLLH AK + FL+ + ++ HQV
Sbjct: 84 CLRYYSWLVKNSDIS---VSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIF 140
Query: 133 --------------FNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVE 178
D LV+ YA + ++ F + + G L + L+ AL++
Sbjct: 141 HAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLK 200
Query: 179 QGCFDAVAVVSKQISMRGFENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMI 238
+ V V K++ R + +V F
Sbjct: 201 ENRSADVEYVYKEMIRRKIQPNV----------------------------------FTF 226
Query: 239 GIVVDALCKNSRFEQAGKLLEDFKD---RDDVVKLEKAYDVWLRNLVRAGRLDLALEFLK 295
+V++ALCK + +A ++ED K +VV D + + L G++ A LK
Sbjct: 227 NVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCK-LGGNGKMYKADAVLK 285
Query: 296 SKNSLEGYV-PEVFRFNFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCK 354
+E V P + FN L+ K++ L +F +M + + P+ ++ N+++ C
Sbjct: 286 EM--VENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCN 343
Query: 355 AGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSIDHGLFPGKKT 414
G + AI + G+ PN I YN LIN C + EA ++ + G P +
Sbjct: 344 GGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRM 403
Query: 415 LSILADALCRDGKFEQMKDLVIFAL----ERNIKLRDV-TYDKFISALCKANKVEVGYLI 469
++L DA C+ GK + FAL ER + DV TY+ I+ LC+ +E +
Sbjct: 404 YNMLIDAYCKLGKIDDG-----FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL 458
Query: 470 HSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLC- 528
+L+ + T+ L+ G+ + + AA LL EM + G KP + V++ C
Sbjct: 459 FDQLTS-KGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCK 517
Query: 529 --NMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLVPQ 586
N++ Q+ + N YN + G + + A + M GLVP
Sbjct: 518 EGNLKAATNMRTQM--EKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575
Score = 86.7 bits (213), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 102/467 (21%), Positives = 187/467 (40%), Gaps = 51/467 (10%)
Query: 341 DGVTMNTVLC-----FFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHE 395
D V +N+++ + ++ E +K +G + + L+ +L + + +
Sbjct: 147 DNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSAD 206
Query: 396 AYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQ----MKDLVIFALERNIKLRDVTYD 451
V K I + P T +++ +ALC+ GK + M+D+ ++ N+ V+Y+
Sbjct: 207 VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNV----VSYN 262
Query: 452 KFISALCKANKVEVGYLIHSELSRM--NKVASE-NTYIQLIHGFNKSNRADIAARLLVEM 508
I CK Y + L M N V+ T+ LI GF K + + ++ EM
Sbjct: 263 TLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM 322
Query: 509 EENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRP 568
+ KP + ++I LCN ++ M + + N YN I+G
Sbjct: 323 LDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDML 382
Query: 569 DLARAVYELMQRSGLVPQLGSNILMLQSYLKRKNGIPRKLYNTLIVGLCKAMKANLAWGF 628
A ++ ++ G VP ++YN LI CK K + +
Sbjct: 383 KEALDMFGSVKGQGAVPT-------------------TRMYNMLIDAYCKLGKIDDGFAL 423
Query: 629 MREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALK 688
EM G+ P + Y LI LC N + + + L G + + + H L
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG------LPDLVTFHILM 477
Query: 689 TRDLYEAWIRLRGMLINEQSKISLLGQLIG--------VFSGCIKVSQDIEGLQKMIEQC 740
+ R ML+ E SK+ L + + G +K + ++ Q E+
Sbjct: 478 EGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMR-TQMEKERR 536
Query: 741 FPLDTYTYNILLRRLSV-SEIDHACELFNRMRRKGYEPDQWTFDILK 786
++ +YN+LL+ S +++ A L N M KG P++ T++I+K
Sbjct: 537 LRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVK 583
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 154/408 (37%), Gaps = 58/408 (14%)
Query: 420 DALCRDGKFEQMKDLV-IFALERNIKLRDVTYDKFISALCKANKVEVGYLIHSELSRMNK 478
D R+G Q+ + ++ N+ + + D + A ++ E+G+
Sbjct: 125 DGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGY 184
Query: 479 VASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVIRCLCNMETPAKQFL 538
S + L+ K NR+ + EM +P VI LC K
Sbjct: 185 KLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARD 244
Query: 539 QLLNMQLSHQETNFQIYNFFIDG---AGHVKRPDLARAVYELMQRSGLVPQLGSNILMLQ 595
+ +M++ N YN IDG G + A AV + M + + P L + +++
Sbjct: 245 VMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILID 304
Query: 596 SYLKRKNGIPRKL-----------------YNTLIVGLCKAMKANLAWGFMREMRHNGMY 638
+ K N +P + YN+LI GLC K + A +M G+
Sbjct: 305 GFWKDDN-LPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQ 363
Query: 639 PSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHALKTRDLYEAWIR 698
P++ Y LI C + + ++G G T+ R
Sbjct: 364 PNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTT---------------------R 402
Query: 699 LRGMLINEQSKISLLGQLIGVFSGCIKVSQDIEGLQKMIEQCFPLDTYTYNILLRRLSVS 758
+ MLI+ K LG++ F+ +K + EG+ D TYN L+ L +
Sbjct: 403 MYNMLIDAYCK---LGKIDDGFA--LKEEMEREGIVP--------DVGTYNCLIAGLCRN 449
Query: 759 -EIDHACELFNRMRRKGYEPDQWTFDILKCGLYNCLRTDEAERRLEEM 805
I+ A +LF+++ KG PD TF IL G + +A L+EM
Sbjct: 450 GNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEM 496
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 134/346 (38%), Gaps = 44/346 (12%)
Query: 72 KTKDVLSCLKFFDWAGRQPHFHHTRATFHAIFKLLHCAKLTPLMVDFLENYKKDRYYHQV 131
K +DV+ +K + G P+ KL K+ E + D +
Sbjct: 241 KARDVMEDMKVY---GCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLT 297
Query: 132 RFNDTLVMGYALAGKPDIALHLFGKMRFQGMDLDDYAYHVLLNALVEQGCF-DAVAVVSK 190
FN L+ G+ ++ +F +M Q + + +Y+ L+N L G +A+++ K
Sbjct: 298 TFN-ILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDK 356
Query: 191 QISMRGFENDVTRTIMLKCLCKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSR 250
+S N +T ++ CK + EA++ F + + M +++DA CK +
Sbjct: 357 MVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGK 416
Query: 251 FEQAGKLLEDFKDRDDVVKLEKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRF 310
+ L E+ +R+ +V Y+ + L R G ++ A + S +G +P++ F
Sbjct: 417 IDDGFALKEEM-EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS-KG-LPDLVTF 473
Query: 311 NFLVSRLLKENRLMEVFDLFMDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIEL------ 364
+ L+ ++ + L +M + + P +T N V+ +CK G + A +
Sbjct: 474 HILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEK 533
Query: 365 -----------------YKSRS-------------EFGLSPNGIVY 380
Y + E GL PN I Y
Sbjct: 534 ERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 287,538,621
Number of Sequences: 539616
Number of extensions: 11922429
Number of successful extensions: 43321
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 266
Number of HSP's successfully gapped in prelim test: 173
Number of HSP's that attempted gapping in prelim test: 35192
Number of HSP's gapped (non-prelim): 2895
length of query: 806
length of database: 191,569,459
effective HSP length: 126
effective length of query: 680
effective length of database: 123,577,843
effective search space: 84032933240
effective search space used: 84032933240
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 66 (30.0 bits)