BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047493
(77 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8W4S4|VHAA3_ARATH Vacuolar proton ATPase a3 OS=Arabidopsis thaliana GN=VHA-a3 PE=1
SV=1
Length = 821
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
QLI+P+ESAH T+SYLG LGL QFKDLN+ KS FQRT+AAQ++
Sbjct: 25 VQLIVPMESAHLTVSYLGDLGLVQFKDLNSEKSPFQRTYAAQIK 68
>sp|Q9SJT7|VHAA2_ARATH Vacuolar proton ATPase a2 OS=Arabidopsis thaliana GN=VHA-a2 PE=1
SV=1
Length = 821
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 38/44 (86%)
Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
Q+I+P+ESAH T+SYLG LGL QFKDLN+ KS FQRT+AAQ++
Sbjct: 26 VQVIVPMESAHLTVSYLGDLGLVQFKDLNSEKSPFQRTYAAQIK 69
>sp|Q8RWZ7|VHAA1_ARATH Vacuolar proton ATPase a1 OS=Arabidopsis thaliana GN=VHA-a1 PE=1
SV=1
Length = 817
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
QLIIP+ESAH +I+YLG LGL QF+DLNA KS FQRTFA QV+
Sbjct: 22 VQLIIPVESAHRSITYLGELGLLQFRDLNADKSPFQRTFANQVK 65
>sp|Q920R6|VPP4_MOUSE V-type proton ATPase 116 kDa subunit a isoform 4 OS=Mus musculus
GN=Atp6v0a4 PE=2 SV=1
Length = 833
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
+Q+ + +E+A+C ++ LG LGL QFKDLNA + FQR F +VR
Sbjct: 13 SQVFLQVEAAYCCVAELGELGLVQFKDLNANVNSFQRKFVNEVR 56
>sp|Q9HBG4|VPP4_HUMAN V-type proton ATPase 116 kDa subunit a isoform 4 OS=Homo sapiens
GN=ATP6V0A4 PE=1 SV=2
Length = 840
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
+QL + +E+A+C ++ LG LGL QFKDLN + FQR F +VR
Sbjct: 13 SQLFLQVEAAYCCVAELGELGLVQFKDLNMNVNSFQRKFVNEVR 56
>sp|Q29466|VPP1_BOVIN V-type proton ATPase 116 kDa subunit a isoform 1 OS=Bos taurus
GN=ATP6V0A1 PE=2 SV=1
Length = 838
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
AQL + E+A+C +S LG LG QF+DLN ++FQR F +VR
Sbjct: 13 AQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVR 56
>sp|Q5R422|VPP1_PONAB V-type proton ATPase 116 kDa subunit a isoform 1 OS=Pongo abelii
GN=ATP6V0A1 PE=2 SV=1
Length = 837
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
AQL + E+A+C +S LG LG QF+DLN ++FQR F +VR
Sbjct: 13 AQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVR 56
>sp|Q9I8D0|VPP1_CHICK V-type proton ATPase 116 kDa subunit a isoform 1 OS=Gallus gallus
GN=ATP6V0A1 PE=1 SV=1
Length = 838
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
AQL + E+A+C +S LG LG QF+DLN ++FQR F +VR
Sbjct: 13 AQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVR 56
>sp|Q93050|VPP1_HUMAN V-type proton ATPase 116 kDa subunit a isoform 1 OS=Homo sapiens
GN=ATP6V0A1 PE=1 SV=3
Length = 837
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
AQL + E+A+C +S LG LG QF+DLN ++FQR F +VR
Sbjct: 13 AQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVR 56
>sp|Q8AVM5|VPP1_XENLA V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus
laevis GN=atp6v0a1 PE=2 SV=1
Length = 831
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
AQL + E+A+C +S LG LG QF+DLN ++FQR F +VR
Sbjct: 13 AQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVR 56
>sp|A1A5G6|VPP1_XENTR V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus
tropicalis GN=atp6v0a1 PE=2 SV=1
Length = 837
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
AQL + E+A+C +S LG LG QF+DLN ++FQR F +VR
Sbjct: 13 AQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVR 56
>sp|Q9Z1G4|VPP1_MOUSE V-type proton ATPase 116 kDa subunit a isoform 1 OS=Mus musculus
GN=Atp6v0a1 PE=1 SV=3
Length = 839
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
AQL + E+A+C +S LG LG QF+DLN ++FQR F +VR
Sbjct: 13 AQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVR 56
>sp|Q13488|VPP3_HUMAN V-type proton ATPase 116 kDa subunit a isoform 3 OS=Homo sapiens
GN=TCIRG1 PE=1 SV=3
Length = 830
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 30 ADAQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
A QL +P +A+ +S LG LGL +F+DLNA S FQR F VR
Sbjct: 11 ALVQLFLPTAAAYTCVSRLGELGLVEFRDLNASVSAFQRRFVVDVR 56
>sp|Q54E04|VATM_DICDI Vacuolar proton translocating ATPase 100 kDa subunit
OS=Dictyostelium discoideum GN=vatM PE=1 SV=2
Length = 815
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 18 WLLPNDGSSAVGADAQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
+L P+ S+ QL + IE+AH T+ LG LGL QF D N +LFQR F +V+
Sbjct: 3 FLRPSIWRSSPMQMVQLFVQIEAAHDTVDELGKLGLIQFLDDNEHVNLFQRNFVNEVK 60
>sp|P25286|VPP1_RAT V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus
norvegicus GN=Atp6v0a1 PE=2 SV=1
Length = 838
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
AQL + E+A+C +S L LG QF+DLN ++FQR F +VR
Sbjct: 13 AQLFLQSEAAYCCVSELEELGKVQFRDLNPDVNVFQRKFVNEVR 56
>sp|P32563|VPH1_YEAST V-type proton ATPase subunit a, vacuolar isoform OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPH1 PE=1
SV=3
Length = 840
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%)
Query: 26 SAVGADAQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
SA A Q IP E + + LG LGL QF+DLN+ FQRTF ++R
Sbjct: 11 SAEMALVQFYIPQEISRDSAYTLGQLGLVQFRDLNSKVRAFQRTFVNEIR 60
>sp|O13742|VPH1_SCHPO V-type proton ATPase subunit a OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=vph1 PE=3 SV=2
Length = 831
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 33 QLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
QL +P ESA +S LG L FKDLN FQR+F ++R
Sbjct: 15 QLYLPTESARPIMSALGELSTIHFKDLNPDVVAFQRSFVREIR 57
>sp|P30628|VPP1_CAEEL Probable V-type proton ATPase 116 kDa subunit a OS=Caenorhabditis
elegans GN=unc-32 PE=2 SV=3
Length = 905
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
AQL + ++++ ++ LG LGL QF+DLN S FQR + +VR
Sbjct: 25 AQLYLQSDASYQCVAELGELGLVQFRDLNPDVSSFQRKYVNEVR 68
>sp|P15920|VPP2_MOUSE V-type proton ATPase 116 kDa subunit a isoform 2 OS=Mus musculus
GN=Atp6v0a2 PE=1 SV=2
Length = 856
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
AQL + +A+ +S LG GL QF+DLN S FQR F +V+
Sbjct: 13 AQLFLQSGTAYECLSALGEKGLVQFRDLNQNVSSFQRKFVGEVK 56
>sp|Q9Y487|VPP2_HUMAN V-type proton ATPase 116 kDa subunit a isoform 2 OS=Homo sapiens
GN=ATP6V0A2 PE=1 SV=2
Length = 856
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
AQL + +A+ +S LG GL QF+DLN S FQR F +V+
Sbjct: 13 AQLFLQSGTAYECLSALGEKGLVQFRDLNQNVSSFQRKFVGEVK 56
>sp|O97681|VPP2_BOVIN V-type proton ATPase 116 kDa subunit a isoform 2 OS=Bos taurus
GN=ATP6V0A2 PE=2 SV=1
Length = 854
Score = 38.9 bits (89), Expect = 0.011, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
AQL + +A+ +S LG GL +F+DLN S FQR F +V+
Sbjct: 13 AQLFLQSGTAYECLSVLGEKGLVEFRDLNQNVSSFQRKFVGEVK 56
>sp|Q01290|VPH1_NEUCR V-type proton ATPase subunit a OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=vph-1 PE=3 SV=1
Length = 856
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 26/50 (52%)
Query: 26 SAVGADAQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
SA + QL I E + LG LGL F+DLN+ S FQR F +R
Sbjct: 11 SADMSMVQLYISNEIGREVCNALGELGLVHFRDLNSELSAFQRAFTQDIR 60
>sp|P37296|STV1_YEAST V-type proton ATPase subunit a, Golgi isoform OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=STV1 PE=1
SV=2
Length = 890
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 26 SAVGADAQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
SA QL IP+E LG + +F DLN + FQR + Q+R
Sbjct: 10 SADMTYVQLYIPLEVIREVTFLLGKMSVFMVMDLNKDLTAFQRGYVNQLR 59
>sp|Q8K4Q7|CERK1_MOUSE Ceramide kinase OS=Mus musculus GN=Cerk PE=2 SV=2
Length = 531
Score = 29.6 bits (65), Expect = 5.4, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 16 RWWLLPNDGSSAVGADAQLIIPIE 39
RWW P G SA GADA+ ++ E
Sbjct: 33 RWWRSPEPGPSAPGADARSVLVSE 56
>sp|A1SSX2|RNFD_PSYIN Electron transport complex protein RnfD OS=Psychromonas ingrahamii
(strain 37) GN=rnfD PE=3 SV=1
Length = 350
Score = 29.3 bits (64), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 13/69 (18%)
Query: 3 LTELFNQKRKKNGRW----WLLPNDGSSAVGADAQLIIPIESAHCTISYLGGLGLFQF-- 56
+TE+FN + K W W+ +G+ G L I H +S+L G+G+F F
Sbjct: 202 VTEIFNSVQFKASSWQQIYWI---NGAFLAGGLILLFKRIVHWHIPMSFLLGIGIFSFIA 258
Query: 57 ----KDLNA 61
DLNA
Sbjct: 259 FAYSPDLNA 267
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,361,512
Number of Sequences: 539616
Number of extensions: 930424
Number of successful extensions: 2459
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2434
Number of HSP's gapped (non-prelim): 28
length of query: 77
length of database: 191,569,459
effective HSP length: 48
effective length of query: 29
effective length of database: 165,667,891
effective search space: 4804368839
effective search space used: 4804368839
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)