Query 047493
Match_columns 77
No_of_seqs 101 out of 262
Neff 4.1
Searched_HMMs 13730
Date Mon Mar 25 20:29:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047493.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/047493hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1nh8a2 d.58.5.3 (A:211-284) A 43.3 10 0.00075 21.6 3.0 27 26-52 34-60 (74)
2 d2cz4a1 d.58.5.1 (A:1-100) Hyp 43.0 9.1 0.00066 22.1 2.7 27 27-53 4-30 (100)
3 d1dwka1 a.35.1.4 (A:1-86) Cyan 34.0 1.8 0.00013 25.8 -1.7 45 5-49 17-66 (86)
4 d1h3da2 d.58.5.3 (A:225-299) A 30.5 14 0.001 21.0 2.1 28 25-52 34-61 (75)
5 d1xria_ c.45.1.1 (A:) Putative 28.0 13 0.00095 21.9 1.7 33 19-62 11-43 (151)
6 d2csua1 c.2.1.8 (A:1-129) Acet 25.9 14 0.001 21.9 1.6 30 27-56 63-92 (129)
7 d1n0ua5 d.58.11.1 (A:726-842) 25.5 42 0.0031 19.3 3.7 35 27-61 1-36 (117)
8 d2bv3a5 d.58.11.1 (A:600-688) 24.3 29 0.0021 19.1 2.7 26 27-52 4-29 (89)
9 d1zunb3 c.37.1.8 (B:16-237) Su 23.3 11 0.0008 24.3 0.7 14 11-24 199-212 (222)
10 d1zvpa2 d.58.18.9 (A:68-131) H 22.9 33 0.0024 19.0 2.7 20 33-52 44-63 (64)
11 d2ebsa2 b.69.13.1 (A:431-786) 22.7 5.8 0.00043 27.1 -0.9 34 27-61 13-46 (356)
12 d1r7la_ d.277.1.1 (A:) Bacillu 21.9 18 0.0013 21.6 1.5 25 38-62 48-72 (103)
13 d1iuka_ c.2.1.8 (A:) Hypotheti 21.1 9.7 0.00071 22.8 0.0 27 27-53 69-95 (136)
No 1
>d1nh8a2 d.58.5.3 (A:211-284) ATP phosphoribosyltransferase (ATP-PRTase, HisG), regulatory C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=43.26 E-value=10 Score=21.61 Aligned_cols=27 Identities=11% Similarity=0.231 Sum_probs=24.5
Q ss_pred ccccceEEEEeecccHHHHHHHhhccc
Q 047493 26 SAVGADAQLIIPIESAHCTISYLGGLG 52 (77)
Q Consensus 26 SE~M~l~qL~ip~E~A~~~V~eLG~lg 52 (77)
.++|.-++.+++.+..|++|.+|-+.|
T Consensus 34 ~~~wvAV~~vv~e~~v~~~i~~Lk~~G 60 (74)
T d1nh8a2 34 DPDWVAIRALVPRRDVNGIMDELAAIG 60 (74)
T ss_dssp STTEEEEEEEEEGGGHHHHHHHHHHTT
T ss_pred CCCEEEEEEEEeHHHHHHHHHHHHHcC
Confidence 567889999999999999999998887
No 2
>d2cz4a1 d.58.5.1 (A:1-100) Hypothetical protein TTHA0516 {Thermus thermophilus [TaxId: 274]}
Probab=43.05 E-value=9.1 Score=22.12 Aligned_cols=27 Identities=7% Similarity=-0.068 Sum_probs=24.1
Q ss_pred cccceEEEEeecccHHHHHHHhhcccc
Q 047493 27 AVGADAQLIIPIESAHCTISYLGGLGL 53 (77)
Q Consensus 27 E~M~l~qL~ip~E~A~~~V~eLG~lgl 53 (77)
.+|.++.++++++.+....+.|.+.|.
T Consensus 4 ~~mK~v~iIv~~~~~~~v~~~L~~~Gv 30 (100)
T d2cz4a1 4 VPLKLVTIVAESLLEKRLVEEVKRLGA 30 (100)
T ss_dssp EEEEEEEEEEEGGGHHHHHHHHHHTTC
T ss_pred cceEEEEEEECHHHHHHHHHHHHHCCC
Confidence 579999999999999999999988874
No 3
>d1dwka1 a.35.1.4 (A:1-86) Cyanase N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=34.00 E-value=1.8 Score=25.76 Aligned_cols=45 Identities=18% Similarity=0.144 Sum_probs=36.8
Q ss_pred HHHHHhhhhcCccccC-CCcccccccc----eEEEEeecccHHHHHHHhh
Q 047493 5 ELFNQKRKKNGRWWLL-PNDGSSAVGA----DAQLIIPIESAHCTISYLG 49 (77)
Q Consensus 5 ~~~~~~~~~~~~~~~~-~~~~RSE~M~----l~qL~ip~E~A~~~V~eLG 49 (77)
-++..|.+|+.+|-.- -.+.+|+... |.|--+|.|.|......||
T Consensus 17 ~Il~AK~~kgltw~~IA~~iG~s~vwvtaa~lGQ~~l~~~~A~~l~~~L~ 66 (86)
T d1dwka1 17 AILLSKAKKDLSFAEIADGTGLAEAFVTAALLGQQALPADAARLVGAKLD 66 (86)
T ss_dssp HHHHHHHHTTCCHHHHHTTSSSCHHHHHHHHTTSSCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCHHHHHHHhCCCHHHHHHHHhcCCCCCHHHHHHHHHHcC
Confidence 3678899999999764 4578998864 8889999999998887776
No 4
>d1h3da2 d.58.5.3 (A:225-299) ATP phosphoribosyltransferase (ATP-PRTase, HisG), regulatory C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=30.49 E-value=14 Score=21.00 Aligned_cols=28 Identities=14% Similarity=0.111 Sum_probs=19.7
Q ss_pred cccccceEEEEeecccHHHHHHHhhccc
Q 047493 25 SSAVGADAQLIIPIESAHCTISYLGGLG 52 (77)
Q Consensus 25 RSE~M~l~qL~ip~E~A~~~V~eLG~lg 52 (77)
..+++.-++.+++.+..|+++.+|-+.|
T Consensus 34 ~~~~wvAV~~vv~e~~v~~~i~~Lk~~G 61 (75)
T d1h3da2 34 GDQQRVAMHMVSSETLFWETMEKLKALG 61 (75)
T ss_dssp -------BEEEESSCCCHHHHHHHHHTT
T ss_pred CCCCEEEEEEEEchHHHHHHHHHHHHcC
Confidence 4678889999999999999999998877
No 5
>d1xria_ c.45.1.1 (A:) Putative phosphatase At1g05000 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=28.04 E-value=13 Score=21.91 Aligned_cols=33 Identities=24% Similarity=0.157 Sum_probs=23.6
Q ss_pred cCCCcccccccceEEEEeecccHHHHHHHhhcccceeeeeCCCC
Q 047493 19 LLPNDGSSAVGADAQLIIPIESAHCTISYLGGLGLFQFKDLNAG 62 (77)
Q Consensus 19 ~~~~~~RSE~M~l~qL~ip~E~A~~~V~eLG~lglvqF~DLN~~ 62 (77)
-++++|||.. |.+.. +..|.++|+=..+||.++
T Consensus 11 V~~~lyRs~~--------~t~~~---~~~L~~lgIktIidLr~~ 43 (151)
T d1xria_ 11 VDNGIFRSGF--------PDSAN---FSFLQTLGLRSIIYLCPE 43 (151)
T ss_dssp EETTEEEESC--------CCHHH---HHHHHHHTCSEEEECCSS
T ss_pred ecCCceecCC--------CCHHH---HHHHHHCCCCEEEECCCc
Confidence 3577999975 34443 456778889999999764
No 6
>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=25.87 E-value=14 Score=21.94 Aligned_cols=30 Identities=17% Similarity=0.083 Sum_probs=25.7
Q ss_pred cccceEEEEeecccHHHHHHHhhcccceee
Q 047493 27 AVGADAQLIIPIESAHCTISYLGGLGLFQF 56 (77)
Q Consensus 27 E~M~l~qL~ip~E~A~~~V~eLG~lglvqF 56 (77)
++..++-+++|.+.+-+++.++++.|.=..
T Consensus 63 ~~vDlvvi~vp~~~~~~~~~~~~~~g~~~~ 92 (129)
T d2csua1 63 DEIDLAIIVVPKRFVKDTLIQCGEKGVKGV 92 (129)
T ss_dssp SCCSEEEECSCHHHHHHHHHHHHHHTCCEE
T ss_pred CCCceEEEecChHHhHHHHHHHHHcCCCEE
Confidence 467789999999999999999999995433
No 7
>d1n0ua5 d.58.11.1 (A:726-842) Elongation factor 2 (eEF-2) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.48 E-value=42 Score=19.34 Aligned_cols=35 Identities=11% Similarity=-0.004 Sum_probs=27.6
Q ss_pred cccceEEEEeecccHHHHHHHhhcc-cceeeeeCCC
Q 047493 27 AVGADAQLIIPIESAHCTISYLGGL-GLFQFKDLNA 61 (77)
Q Consensus 27 E~M~l~qL~ip~E~A~~~V~eLG~l-glvqF~DLN~ 61 (77)
|+|-.+.+.+|.|..-.+++.|.+. |.|.-.|..+
T Consensus 1 EPi~~v~I~~p~e~~G~V~~~l~~rRG~i~~~~~~~ 36 (117)
T d1n0ua5 1 EPVFLVEIQCPEQAVGGIYSVLNKKRGQVVSEEQRP 36 (117)
T ss_dssp EEEEEEEEEECGGGHHHHHHHHHTTTCEEEEEEC--
T ss_pred CCEEEEEEEECHHHHHHHHHHHHHcCCeEeeeeecC
Confidence 6778899999999999999999855 7776666543
No 8
>d2bv3a5 d.58.11.1 (A:600-688) Elongation factor G (EF-G) {Thermus thermophilus [TaxId: 274]}
Probab=24.27 E-value=29 Score=19.06 Aligned_cols=26 Identities=15% Similarity=-0.001 Sum_probs=23.4
Q ss_pred cccceEEEEeecccHHHHHHHhhccc
Q 047493 27 AVGADAQLIIPIESAHCTISYLGGLG 52 (77)
Q Consensus 27 E~M~l~qL~ip~E~A~~~V~eLG~lg 52 (77)
|+|-.+.+.+|.|..-.+++.|.+..
T Consensus 4 EPi~~~~I~~p~e~~g~v~~~l~~rr 29 (89)
T d2bv3a5 4 EPIMRVEVTTPEEYMGDVIGDLNARR 29 (89)
T ss_dssp EEEEEEEEEEEGGGHHHHHHHHHTTT
T ss_pred CcEEEEEEEECHHHHHHHHHHHHHcC
Confidence 67888999999999999999998873
No 9
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=23.30 E-value=11 Score=24.26 Aligned_cols=14 Identities=7% Similarity=0.233 Sum_probs=10.6
Q ss_pred hhhcCccccCCCcc
Q 047493 11 RKKNGRWWLLPNDG 24 (77)
Q Consensus 11 ~~~~~~~~~~~~~~ 24 (77)
+.+||+||..++++
T Consensus 199 ~s~~~~wy~g~tl~ 212 (222)
T d1zunb3 199 KSERSPWYAGQSLM 212 (222)
T ss_dssp CCTTCTTCCSCCTT
T ss_pred CcccCCCCcCChHH
Confidence 46789998887764
No 10
>d1zvpa2 d.58.18.9 (A:68-131) Hypothetical protein VC0802 {Vibrio cholerae [TaxId: 666]}
Probab=22.90 E-value=33 Score=18.96 Aligned_cols=20 Identities=20% Similarity=0.408 Sum_probs=17.7
Q ss_pred EEEeecccHHHHHHHhhccc
Q 047493 33 QLIIPIESAHCTISYLGGLG 52 (77)
Q Consensus 33 qL~ip~E~A~~~V~eLG~lg 52 (77)
.+++|.+.+-+++..|.++.
T Consensus 44 hifVp~~~~~~Al~~L~~l~ 63 (64)
T d1zvpa2 44 HIFVQKEKAQQALQALGEFA 63 (64)
T ss_dssp EEEEEGGGHHHHHHHHTTSC
T ss_pred eEEEchhhHHHHHHHHHHhc
Confidence 79999999999999998763
No 11
>d2ebsa2 b.69.13.1 (A:431-786) Oligoxyloglucan reducing end-specific cellobiohydrolase {Yeast (Geotrichum sp. M128) [TaxId: 203496]}
Probab=22.68 E-value=5.8 Score=27.12 Aligned_cols=34 Identities=24% Similarity=0.252 Sum_probs=30.5
Q ss_pred cccceEEEEeecccHHHHHHHhhcccceeeeeCCC
Q 047493 27 AVGADAQLIIPIESAHCTISYLGGLGLFQFKDLNA 61 (77)
Q Consensus 27 E~M~l~qL~ip~E~A~~~V~eLG~lglvqF~DLN~ 61 (77)
|||....|+-|+.-| ..|+.+|..|=+-+.||..
T Consensus 13 ee~~~~~l~spp~g~-~l~s~~gd~~gf~~~dl~~ 46 (356)
T d2ebsa2 13 EENAILSLRSPKSGA-ALLSGIGNISGMKHDDLTK 46 (356)
T ss_dssp BCCBEEEEECCSSSS-SEEEEESSSBCBEESCTTS
T ss_pred ehhheeeeEcCCCCC-ceeEEEecCCceEEccCCC
Confidence 899999999999987 5999999999888889865
No 12
>d1r7la_ d.277.1.1 (A:) Bacillus phage protein {Bacillus cereus [TaxId: 1396]}
Probab=21.90 E-value=18 Score=21.58 Aligned_cols=25 Identities=28% Similarity=0.077 Sum_probs=22.0
Q ss_pred cccHHHHHHHhhcccceeeeeCCCC
Q 047493 38 IESAHCTISYLGGLGLFQFKDLNAG 62 (77)
Q Consensus 38 ~E~A~~~V~eLG~lglvqF~DLN~~ 62 (77)
.|+||++|+.|.---.|.-.||.|.
T Consensus 48 iesawqvvekleydvkvtktdlkpk 72 (103)
T d1r7la_ 48 IESAWQVVEKLEYDVKVTKTDLKPK 72 (103)
T ss_dssp HHHHHHHHHHSSSEEEEEECSSSSS
T ss_pred hHHHHHHHHHhhheeeEeeccCCcc
Confidence 4899999999998888999998875
No 13
>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}
Probab=21.06 E-value=9.7 Score=22.85 Aligned_cols=27 Identities=7% Similarity=-0.117 Sum_probs=24.1
Q ss_pred cccceEEEEeecccHHHHHHHhhcccc
Q 047493 27 AVGADAQLIIPIESAHCTISYLGGLGL 53 (77)
Q Consensus 27 E~M~l~qL~ip~E~A~~~V~eLG~lgl 53 (77)
++..++.+++|++..-+++.+++++|.
T Consensus 69 ~~iD~v~v~~p~~~v~~~v~~~~~~g~ 95 (136)
T d1iuka_ 69 EPVDILDVFRPPSALMDHLPEVLALRP 95 (136)
T ss_dssp SCCSEEEECSCHHHHTTTHHHHHHHCC
T ss_pred CCCceEEEeccHHHHHHHHHHHHhhCC
Confidence 456799999999999999999999984
Done!