BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047497
(580 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 163/549 (29%), Positives = 252/549 (45%), Gaps = 62/549 (11%)
Query: 33 RHYKFDIKLQNVTRLCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQ-NNISIHWHG 91
RHYK++++ CN ++ +NG+FPGP I A GD +++++ N + + IHWHG
Sbjct: 4 RHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHG 63
Query: 92 IRQLRSGWADGPAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLSWLRST-LYGPIIIL 150
I Q + WADG A I+QC I G+++ YNFT V GT ++H HL RS LYG +I+
Sbjct: 64 ILQRGTPWADGTASISQCAINPGETFFYNFT-VDNPGTFFYHGHLGMQRSAGLYGSLIVD 122
Query: 151 PKRGIPYPFTKPYKEVPIIFGEWFK------------------ADPETIISQALQTGGGP 192
P +G PF E+ ++ +W+ +P+TI L G G
Sbjct: 123 PPQGKKEPFHYD-GEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTI----LLNGRGQ 177
Query: 193 ---NVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLT 249
+++ Y N P L + + V P KTY +R+ + L F+I NH L
Sbjct: 178 FDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLL 237
Query: 250 VVEADAIYVKPFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPYVTGQGTFDNSTVA 309
VVEAD YV+PF T + I G++ +VL+ T + PS +++ T T+
Sbjct: 238 VVEADGNYVQPFYTSDIDIYSGESYSVLITTDQN-PSENYWVSVGTRARHPNTPPGLTLL 296
Query: 310 GILEYEKPLNFHLSSNSIKNLPLFKP-VLPALNDTSFATSFTNKLRSLASTQFPANVPQN 368
L NS+ LP P PA +D + +FT ++ + + P P
Sbjct: 297 NYL-----------PNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKP---PVK 342
Query: 369 VDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQASVNNISFVMPTTALLQAHFTGKSYGVYN 428
+RR F T NG + + ++N++S +P T L A ++
Sbjct: 343 FNRRIFLL-----------NTQNVINGYV-KWAINDVSLALPPTPYLGA-MKYNLLHAFD 389
Query: 429 PDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVLPFNSSVELIMQDTSILG---AESHPLHL 485
+ P TPP N G + V++I+Q+ +++ +E+HP HL
Sbjct: 390 QNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHL 449
Query: 486 HXXXXXXXXXXXXXXDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLADNPGVWFMHCH 545
H ++ + NL +P RNTV + GW AIRF+ADNPGVW HCH
Sbjct: 450 HGHDFWVLGYGDGKFSAEEE-SSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCH 508
Query: 546 LEVHTSWGL 554
+E H G+
Sbjct: 509 IEPHLHMGM 517
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 532 FLADNPGVWFMHCHLEVHTSWGLKMAWIV 560
F DNPG +F H HL + S GL + IV
Sbjct: 93 FTVDNPGTFFYHGHLGMQRSAGLYGSLIV 121
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 147/522 (28%), Positives = 217/522 (41%), Gaps = 95/522 (18%)
Query: 51 KSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI-----SIHWHGIRQLRSGWADGPAY 105
++ I VN FP P I GD + ++N + N+ SIHWHG Q + WADGPA+
Sbjct: 22 RAAIVVNNVFPAPLITGNMGDNFQLNLVNQMTNHTMLKTTSIHWHGFFQKGTNWADGPAF 81
Query: 106 ITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLS-WLRSTLYGPIIIL-PKRGIPYPFTKPY 163
I QCPI +G S++Y+F + GQ GT W+H+HLS L GP ++ P +
Sbjct: 82 INQCPIASGNSFLYDFQVPGQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHANLYDVDD 141
Query: 164 KEVPIIFGEWFKADPETIISQALQTGGG-PNVSDAYTINGLPGPLYNCSAKDTFKLKVKP 222
+ I +W+ A + G P +D+ INGL G + D + V
Sbjct: 142 ESTVITLADWYHV--------AAKLGPRFPKGADSTLINGL-GRSTSTPTADLAVISVTK 192
Query: 223 GKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTKP 282
GK Y RL++ + + FSI +H LTV+EAD + +P +++ I Q + +L
Sbjct: 193 GKRYRFRLVSLSCDPNYTFSIDSHQLTVIEADGVSTQPVTVDSIQIFAAQRYSFVLNANQ 252
Query: 283 HYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALND 342
+ ++++A P G F + + IL Y+ PV P N
Sbjct: 253 DVDN--YWIRANPNF-GTTGFADGVNSAILRYDDA----------------DPVEPVTNQ 293
Query: 343 TSFATSFTNKLRSLASTQFPANVPQ-----NVDRRFFFTVGLGTSPCQSNQTCQGPNGTM 397
T L L S P N Q N++ F F +GT
Sbjct: 294 TGTTLLLETDLHPLTSMPVPGNPTQGGADLNLNMAFNF------------------DGTN 335
Query: 398 FQASVNNISFVMPTTALLQAHFTGKSYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTKL 457
F +N SF PT +L +G + ++ +G+ +
Sbjct: 336 F--FINGESFTPPTVPVLLQIISGANTA----------------------QDLLPSGS-V 370
Query: 458 VVLPFNSSVELIMQDTSILGAESHPLHLHXXXXXXXXXXXXXXDPNKDPTKFNLVDPVER 517
LP NSS+E+ T+ HP HLH T +N DPV R
Sbjct: 371 YSLPSNSSIEITFPATTAAPGAPHPFHLHGHVFAVVRSAGS--------TSYNYDDPVWR 422
Query: 518 NTV--GVP-SGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKM 556
+ V G P +G V IRF DNPG WF+HCH++ H G +
Sbjct: 423 DVVSTGTPQAGDNVTIRFQTDNPGPWFLHCHIDFHLDAGFAV 464
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 140/517 (27%), Positives = 217/517 (41%), Gaps = 85/517 (16%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI-----SIHWHGIRQLRSGWADGPA 104
++ I VN FP P I +GD+ + V++++ N+ SIHWHG Q + WADGPA
Sbjct: 21 SRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 105 YITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLS-WLRSTLYGPIIIL-PKRGIPYPFTKP 162
++ QCPI TG +++Y+F + Q GT W+H+HLS L GPI++ P+ +
Sbjct: 81 FVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVVYDPQDPHKSLYDVD 140
Query: 163 YKEVPIIFGEWFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKP 222
I +W+ A + G +DA INGL G + D + V
Sbjct: 141 DDSTVITLADWYHL--------AAKVGSPVPTADATLINGL-GRSIDTLNADLAVITVTK 191
Query: 223 GKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTKP 282
GK Y RL++ + + FSI H+LTV+EAD++ +KP +++ I Q + +L
Sbjct: 192 GKRYRFRLVSLSCDPNHVFSIDGHSLTVIEADSVNLKPQTVDSIQIFAAQRYSFVLNADQ 251
Query: 283 HYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALND 342
++++A P +G FD + IL Y+ PV P +
Sbjct: 252 DV--GNYWIRALPN-SGTRNFDGGVNSAILRYDGA----------------APVEPTTSQ 292
Query: 343 TSFATSFT-NKLRSLASTQFPAN-VPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQA 400
T + L +L T P + P VD G G F
Sbjct: 293 TPSTNPLVESALTTLEGTAAPGSPAPGGVDLALNMAFGFA--------------GGKF-- 336
Query: 401 SVNNISFVMPTTALLQAHFTGKSYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVL 460
++N SF PT +L +G ++ +G+ + L
Sbjct: 337 TINGASFTPPTVPVLLQILSGAQSA----------------------QDLLPSGS-VYSL 373
Query: 461 PFNSSVELIMQDTSILGAESHPLHLHXXXXXXXXXXXXXXDPNKDPTKFNLVDPVERNTV 520
P N+ +E+ + T+ HP HLH + +N +PV R+ V
Sbjct: 374 PANADIEISLPATAAAPGFPHPFHLHGHTFAVVRSAGS--------STYNYENPVYRDVV 425
Query: 521 GVPS-GGWVAIRFLADNPGVWFMHCHLEVHTSWGLKM 556
S G V IRF DNPG WF+HCH++ H G +
Sbjct: 426 STGSPGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAV 462
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 143/518 (27%), Positives = 217/518 (41%), Gaps = 87/518 (16%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI-----SIHWHGIRQLRSGWADGPA 104
++ I VN FP P I +GD+ + V++++ N+ SIHWHG Q + WADGPA
Sbjct: 21 SRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 105 YITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLS-WLRSTLYGPIIIL-PKRGIPYPFTKP 162
++ QCPI TG +++Y+F + Q GT W+H+HLS L GPI++ P +
Sbjct: 81 FVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVVYDPNDPHASLYDVD 140
Query: 163 YKEVPIIFGEWFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKP 222
I +W+ A + G +DA INGL G A D + V
Sbjct: 141 DDSTVITLADWYH--------LAAKVGAPVPTADATLINGL-GRSAATLAADLAVITVTK 191
Query: 223 GKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTKP 282
GK Y RL++ + + FSI H+LTV+EAD++ +KP ++L I Q + +L
Sbjct: 192 GKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQRYSFVLNADQ 251
Query: 283 HYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALND 342
+ ++++A P +G F T + IL Y+ PV P +
Sbjct: 252 DVDN--YWIRALPN-SGTQNFAGGTNSAILRYDGA----------------APVEPTTSQ 292
Query: 343 TSFATSFT-NKLRSLASTQFPAN-VPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQA 400
T + L +L T P + P VD G G F
Sbjct: 293 TPSTNPLVESALTTLKGTAAPGSPTPGGVDLALNMAFGFA--------------GGNF-- 336
Query: 401 SVNNISFVMPTTALLQAHFTGKSYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVL 460
++N SF PT +L +G ++ G+ + L
Sbjct: 337 TINGASFTPPTVPVLLQILSGAQSAA----------------------DLLPAGS-VYSL 373
Query: 461 PFNSSVELIMQDTSILGAESHPLHLHXXXXXXXXXXXXXXDPNKDPTKFNLVDPVERNTV 520
P N+ +E+ + T+ HP HLH + +N +PV R+ V
Sbjct: 374 PANADIEISLPATAAAPGFPHPFHLHGHVFAVVRSAGS--------STYNYANPVYRDVV 425
Query: 521 --GVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKM 556
G P G V IRF DNPG WF+HCH++ H G +
Sbjct: 426 STGAP-GDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAV 462
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 143/518 (27%), Positives = 217/518 (41%), Gaps = 87/518 (16%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI-----SIHWHGIRQLRSGWADGPA 104
++ I VN FP P I +GD+ + V++++ N+ SIHWHG Q + WADGPA
Sbjct: 21 SRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 105 YITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLS-WLRSTLYGPIIIL-PKRGIPYPFTKP 162
++ QCPI TG +++Y+F + Q GT W+H+HLS L GPI++ P +
Sbjct: 81 FVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVVYDPNDPHASLYDVD 140
Query: 163 YKEVPIIFGEWFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKP 222
I +W+ A + G +DA INGL G A D + V
Sbjct: 141 DDSTVITLADWYH--------LAAKVGAPVPTADATLINGL-GRSAATLAADLAVITVTK 191
Query: 223 GKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTKP 282
GK Y RL++ + + FSI H+LTV+EAD++ +KP ++L I Q + +L
Sbjct: 192 GKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQRYSFVLNADQ 251
Query: 283 HYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALND 342
+ ++++A P +G F T + IL Y+ PV P +
Sbjct: 252 DVDN--YWIRALPN-SGTQNFAGGTNSAILRYDGA----------------APVEPTTSQ 292
Query: 343 TSFATSFT-NKLRSLASTQFPAN-VPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQA 400
T + L +L T P + P VD G G F
Sbjct: 293 TPSTNPLVESALTTLKGTAAPGSPTPGGVDLALNMAFGFA--------------GGNF-- 336
Query: 401 SVNNISFVMPTTALLQAHFTGKSYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVL 460
++N SF PT +L +G ++ G+ + L
Sbjct: 337 TINGASFTPPTVPVLLQILSGAQSAA----------------------DLLPAGS-VYSL 373
Query: 461 PFNSSVELIMQDTSILGAESHPLHLHXXXXXXXXXXXXXXDPNKDPTKFNLVDPVERNTV 520
P N+ +E+ + T+ HP HLH + +N +PV R+ V
Sbjct: 374 PANADIEISLPATAAAPGFPHPFHLHGHVFAVVRSAGS--------STYNYANPVYRDVV 425
Query: 521 --GVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKM 556
G P G V IRF DNPG WF+HCH++ H G +
Sbjct: 426 STGAP-GDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAV 462
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 149/534 (27%), Positives = 229/534 (42%), Gaps = 89/534 (16%)
Query: 51 KSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI-----SIHWHGIRQLRSGWADGPAY 105
+ + VNG P P I +GD+ + V++ + N+ SIHWHG Q + WADGPA+
Sbjct: 22 REAVVVNGITPAPLITGNKGDRFQLNVIDQLTNHTMLKTSSIHWHGFFQQGTNWADGPAF 81
Query: 106 ITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLS-WLRSTLYGPIIIL-PKRGIPYPFTKPY 163
+ QCPI +G S++Y+F + Q GT W+H+HLS L GP ++ P +
Sbjct: 82 VNQCPIASGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASLYDIDN 141
Query: 164 KEVPIIFGEWFKADPETIISQALQTGGG-PNVSDAYTINGLPGPLYNCSAKDTFKLKVKP 222
+ I +W+ A + G P SD+ INGL G + D +KV
Sbjct: 142 DDTVITLADWYHV--------AAKLGPRFPFGSDSTLINGL-GRTTGIAPSDLAVIKVTQ 192
Query: 223 GKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTKP 282
GK Y RL++ + + FSI NHT+T++EAD+I +P E +++ I Q + +L
Sbjct: 193 GKRYRFRLVSLSCDPNHTFSIDNHTMTIIEADSINTQPLEVDSIQIFAAQRYSFVLDAS- 251
Query: 283 HYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALND 342
P ++++A P G F + IL Y+ + S++ P KP LN+
Sbjct: 252 -QPVDNYWIRANPAFGNTG-FAGGINSAILRYDGAP--EIEPTSVQTTPT-KP----LNE 302
Query: 343 TSFATSFTNKLRSLASTQFPAN-VPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQAS 401
L L+ P + P VD+ NGT F
Sbjct: 303 V--------DLHPLSPMPVPGSPEPGGVDKPLNLVFNF--------------NGTNF--F 338
Query: 402 VNNISFVMPTTALLQAHFTGKSYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVLP 461
+N+ +FV P+ +L +G +V G+ + VLP
Sbjct: 339 INDHTFVPPSVPVLLQILSGAQAA----------------------QDLVPEGS-VFVLP 375
Query: 462 FNSSVELIMQDTSILGAESHPLHLHXXXXXXXXXXXXXXDPNKDPTKFNLVDPVERNTV- 520
NSS+E+ T+ HP HLH + +N +P+ R+ V
Sbjct: 376 SNSSIEISFPATANAPGFPHPFHLHGHAFAVVRSAGS--------SVYNYDNPIFRDVVS 427
Query: 521 -GVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVLDGKHPNQKLPPP 573
G P G V IRF +NPG WF+HCH++ H G +V+ P+ K P
Sbjct: 428 TGQP-GDNVTIRFETNNPGPWFLHCHIDFHLDAGFA---VVMAEDTPDTKAANP 477
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 141/520 (27%), Positives = 220/520 (42%), Gaps = 86/520 (16%)
Query: 51 KSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI-----SIHWHGIRQLRSGWADGPAY 105
+ I VNG FP P I ++GD+ + V++ + N+ SIHWHG Q + WADGPA+
Sbjct: 22 RDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTNWADGPAF 81
Query: 106 ITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLS-WLRSTLYGPIIIL-PKRGIPYPFTKPY 163
+ QCPI +G S++Y+F + Q GT W+H+HLS L GP ++ PK +
Sbjct: 82 VNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPKDPHASRYDVDN 141
Query: 164 KEVPIIFGEWFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPG 223
+ I +W+ + A P +DA INGL G + + V+ G
Sbjct: 142 ESTVITLTDWYH-------TAARLGPRFPLGADATLINGL-GRSASTPTAALAVINVQHG 193
Query: 224 KTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTKPH 283
K Y RL++ + + FSI H LTV+E D I +P +++ I Q + +L
Sbjct: 194 KRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNAN-- 251
Query: 284 YPSATFFMKARPYVTGQGTFDNSTVAGILEYE-KPLNFHLSSNSIKNLPLFKPVLPALND 342
++++A P G F + IL Y+ P+ ++ + +PL +
Sbjct: 252 QTVGNYWIRANPNFGTVG-FAGGINSAILRYQGAPVAEPTTTQTTSVIPLIE-------- 302
Query: 343 TSFATSFTNKLRSLASTQFPAN-VPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQAS 401
L LA P + P VD+ NGT F
Sbjct: 303 --------TNLHPLARMPVPGSPTPGGVDKALNLAFNF--------------NGTNF--F 338
Query: 402 VNNISFVMPTTALLQAHFTGKSYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVLP 461
+NN SF PT +L +G ++ G+ + LP
Sbjct: 339 INNASFTPPTVPVLLQILSGAQTA----------------------QDLLPAGS-VYPLP 375
Query: 462 FNSSVELIMQDTSILGAESHPLHLHXXXXXXXXXXXXXXDPNKDPTKFNLVDPVERNTV- 520
+S++E+ + T++ HP HLH + T +N DP+ R+ V
Sbjct: 376 AHSTIEITLPATALAPGAPHPFHLHGHAFAVVR--------SAGSTTYNYNDPIFRDVVS 427
Query: 521 -GVPSGGW-VAIRFLADNPGVWFMHCHLEVHTSWGLKMAW 558
G P+ G V IRF DNPG WF+HCH++ H G + +
Sbjct: 428 TGTPAAGDNVTIRFQTDNPGPWFLHCHIDFHLEAGFAIVF 467
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 144/540 (26%), Positives = 234/540 (43%), Gaps = 99/540 (18%)
Query: 39 IKLQNVTRLCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQN-----NISIHWHGIR 93
I +VT T++ + NG FPGP I +GD I V++++ N +IHWHG+
Sbjct: 10 ISNADVTPDGFTRAAVVANGVFPGPLITGNKGDNFQINVIDNLTNATMLKTTTIHWHGLF 69
Query: 94 QLRSGWADGPAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLS-WLRSTLYGPIIIL-P 151
Q + WADGPA++ QCPI +G S++Y+FT+ Q GT W+H+HLS L GP+++ P
Sbjct: 70 QHGTNWADGPAFVNQCPIASGNSFLYDFTVPDQAGTFWYHSHLSTQYCDGLRGPLVVYDP 129
Query: 152 KRGIPYPFTKPYKEVPIIFGEWFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCS 211
+ I +W+ + L PN +D+ INGL G +
Sbjct: 130 SDPYASMYDVDDDTTVITLSDWYHT------AAKLGPAFPPN-ADSVLINGL-GRFAGGN 181
Query: 212 AKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPG 271
A D + V+ K Y RL++ + + FSI H +T++E D + +P E +++ I
Sbjct: 182 ASDLAVITVEQNKRYRFRLVSLSCDPNFTFSIDGHNMTIIEVDGVNHEPLEVDSIQIFAS 241
Query: 272 QTTNVLLKTKPHYPSATFFMKARPYVTGQGTFDNS--TVAGILEYEKPLNFHLSSNSIKN 329
Q + +L + ++++A P GT D + + IL Y ++N+ +
Sbjct: 242 QRYSFVLNATQSVDN--YWIRAIP---NTGTIDTTGGLNSAILRYSGADIVDPTANATTS 296
Query: 330 -LPLFKPVLPALNDTSFATSFTNKLRSLASTQFP----ANVPQNVDRRFFFTVGLGTSPC 384
+PL + L L+ S A+ P ++ N+D F
Sbjct: 297 VIPLVETDLVPLD-------------SPAAPGDPVVGGVDLAMNLDFSF----------- 332
Query: 385 QSNQTCQGPNGTMFQASVNNISFVMPTTALLQAHFTGKSYGVYNPDFPTSPLIAFNYTGT 444
NGT F +NN + + PT +L +G
Sbjct: 333 ---------NGTNF--FINNETLIPPTVPVLLQILSGAQSA------------------- 362
Query: 445 PPNNTMVSNGTKLVVLPFNSSVELIMQDTSILGAES-----HPLHLHXXXXXXXXXXXXX 499
+ ++ G+ + LP NS++EL T++ G + HP HLH
Sbjct: 363 ---SDLLPTGS-VYTLPLNSTIELSFPITTVNGVTNAPGAPHPFHLHGHAFSVVRSAGS- 417
Query: 500 XDPNKDPTKFNLVDPVERNTVGVPS-GGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAW 558
+ +N V+PV R+TV + G V IRF DN G WF+HCH++ H G + +
Sbjct: 418 -------SDYNYVNPVRRDTVSTGNPGDNVTIRFTTDNAGPWFLHCHIDFHLEAGFAIVF 470
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 135/513 (26%), Positives = 212/513 (41%), Gaps = 79/513 (15%)
Query: 54 ISVNGKFPGPRIVAREGDQLLIKVMNHVQN-----NISIHWHGIRQLRSGWADGPAYITQ 108
++ G FPGP I GD I N + + SIHWHG Q + WADGPA+ITQ
Sbjct: 26 VNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFITQ 85
Query: 109 CPIQTGQSYVYNFTIVGQRGTLWWHAHL-SWLRSTLYGPIIILPKRGIPYPFTKPYKEVP 167
CPI G S+ YNF + G GT W+H+HL + L GP ++ +
Sbjct: 86 CPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTT 145
Query: 168 II-FGEWFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTY 226
II +W+ ++++ + GG +D+ I+GL N +A + V+ GK Y
Sbjct: 146 IITLADWYH-----VLAKEMGAGGAI-TADSTLIDGLGRTHVNVAAVPLSVITVEVGKRY 199
Query: 227 LLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTKPHYPS 286
+RL++ + + FSI H +T++E D + + + + I Q + +L P
Sbjct: 200 RMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVLNAN--QPV 257
Query: 287 ATFFMKARPYVTGQGTFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALNDTSFA 346
++++A P G+G FD + IL Y+ PV A +
Sbjct: 258 GNYWIRANPNSGGEG-FDGGINSAILRYDGATT-------------ADPVTVA-STVHTK 302
Query: 347 TSFTNKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQASVNNIS 406
L L+ P N Q G + C N + G +N +S
Sbjct: 303 CLIETDLHPLSRNGVPGNPHQ------------GGADCNLNLSLGFACGNFV---INGVS 347
Query: 407 FVMPTTALLQAHFTGKSYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVLPFNSSV 466
F PT +L +G + + L+ P+ +++S LP NS++
Sbjct: 348 FTPPTVPVLLQICSGAN--------TAADLL--------PSGSVIS-------LPSNSTI 384
Query: 467 ELIMQDTSILGAESHPLHLHXXXXXXXXXXXXXXDPNKDPTKFNLVDPVERNTVGVPS-G 525
E+ + + G HP HLH + N DP+ R+ V + G
Sbjct: 385 EIALPAGAAGGP--HPFHLHGHDFAVSESASN--------STSNYDDPIWRDVVSIGGVG 434
Query: 526 GWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAW 558
V IRF DNPG WF+HCH++ H G + +
Sbjct: 435 DNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVF 467
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 144/522 (27%), Positives = 226/522 (43%), Gaps = 92/522 (17%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI-----SIHWHGIRQLRSGWADGPA 104
++ + VNG PGP + GD+ + V++++ N+ SIHWHG Q + WADGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 105 YITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLS-WLRSTLYGPIIIL-PKRGIPYPFTKP 162
+I QCPI G S++Y+F + Q GT W+H+HLS L GP ++ P +
Sbjct: 81 FINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVD 140
Query: 163 YKEVPIIFGEWFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKP 222
+ I +W+ T + GG +DA ING G + S + +KV
Sbjct: 141 NDDTVITLADWY----HTAAKLGPRFPGG---ADATLING-KGRAPSDSVAELSVIKVTK 192
Query: 223 GKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTKP 282
GK Y RL++ + N FSI H LT++E D++ +P E +++ I Q + +L
Sbjct: 193 GKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQ 252
Query: 283 HYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALND 342
+ ++++A P G FD + IL Y+ ++N ++ KP LN+
Sbjct: 253 AVDN--YWIRANPNFGNVG-FDGGINSAILRYDGAPAVEPTTNQTTSV---KP----LNE 302
Query: 343 TSFATSFTNKLRSLASTQFPAN-----VPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTM 397
L L ST P + V + ++ F F NG+
Sbjct: 303 V--------DLHPLVSTPVPGSPSSGGVDKAINMAFNF------------------NGSN 336
Query: 398 FQASVNNISFVMPTTALLQAHFTGKSYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTKL 457
F +N SFV PT +L +G ++ +G+ +
Sbjct: 337 F--FINGASFVPPTVPVLLQILSGAQTA----------------------QDLLPSGS-V 371
Query: 458 VVLPFNSSVELIMQDTSILGAESHPLHLHXXXXXXXXXXXXXXDPNKDPTKFNLVDPVER 517
VLP N+S+E+ T+ HP HLH T +N +P+ R
Sbjct: 372 YVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAGS--------TVYNYDNPIFR 423
Query: 518 NTV--GVPSGGW-VAIRFLADNPGVWFMHCHLEVHTSWGLKM 556
+ V G P+ G V IRF +NPG WF+HCH++ H G +
Sbjct: 424 DVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAV 465
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 144/522 (27%), Positives = 225/522 (43%), Gaps = 92/522 (17%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI-----SIHWHGIRQLRSGWADGPA 104
++ + VNG PGP + GD+ + V++++ N+ SIHWHG Q + WADGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 105 YITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLS-WLRSTLYGPIIIL-PKRGIPYPFTKP 162
+I QCPI G S++Y+F + Q GT W+H+HLS L GP ++ P +
Sbjct: 81 FINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVD 140
Query: 163 YKEVPIIFGEWFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKP 222
+ I +W+ T + GG +DA ING G + S + +KV
Sbjct: 141 NDDTVITLADWY----HTAAKLGPRFPGG---ADATLING-KGRAPSDSVAELSVIKVTK 192
Query: 223 GKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTKP 282
GK Y RL++ + N FSI H LT++E D++ +P E +++ I Q + +L
Sbjct: 193 GKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQ 252
Query: 283 HYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALND 342
+ ++++A P G FD + IL Y+ ++N ++ KP LN+
Sbjct: 253 AVDN--YWIRANPNFGNVG-FDGGINSAILRYDGAPAVEPTTNQTTSV---KP----LNE 302
Query: 343 TSFATSFTNKLRSLASTQFP-----ANVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTM 397
L L ST P V + ++ F F NG+
Sbjct: 303 V--------DLHPLVSTPVPGAPSSGGVDKAINMAFNF------------------NGSN 336
Query: 398 FQASVNNISFVMPTTALLQAHFTGKSYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTKL 457
F +N SFV PT +L +G ++ +G+ +
Sbjct: 337 F--FINGASFVPPTVPVLLQILSGAQTA----------------------QDLLPSGS-V 371
Query: 458 VVLPFNSSVELIMQDTSILGAESHPLHLHXXXXXXXXXXXXXXDPNKDPTKFNLVDPVER 517
VLP N+S+E+ T+ HP HLH T +N +P+ R
Sbjct: 372 YVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAGS--------TVYNYDNPIFR 423
Query: 518 NTV--GVPSGGW-VAIRFLADNPGVWFMHCHLEVHTSWGLKM 556
+ V G P+ G V IRF +NPG WF+HCH++ H G +
Sbjct: 424 DVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAV 465
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 143/526 (27%), Positives = 220/526 (41%), Gaps = 96/526 (18%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQN-----NISIHWHGIRQLRSGWADGPA 104
++ + VNG PGP I +GDQ + V+N++ N + S+HWHG Q + WADGPA
Sbjct: 21 SRDAVVVNGGTPGPLITGNKGDQFQLNVINNLTNFTMLKSTSVHWHGFFQKGTNWADGPA 80
Query: 105 YITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLSWLRSTLY-----GPIIIL-PKRGIPYP 158
++ QCPI G S++Y+F+ Q GT W+H+HL ST Y GP ++ P
Sbjct: 81 FVNQCPIAAGSSFLYDFSTPIQAGTFWYHSHL----STQYCDGDRGPFVVYDPNDPSANL 136
Query: 159 FTKPYKEVPIIFGEWFKADPETIISQALQTG-GGPNVSDAYTINGLP-GPLYNCSAKDTF 216
+ I +W+ A Q G P +DA ING GP + + D
Sbjct: 137 YDVDNLNTVITLTDWYHT--------AAQNGPAKPGGADATLINGQGRGP--SSPSADLA 186
Query: 217 KLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTTNV 276
+ V GK Y RL++ + + FSI H +T+++ D+I V+P + I Q +
Sbjct: 187 VISVTAGKRYRFRLVSNSCDPNYTFSIDGHQMTIIQVDSINVQPLVVLKIQIYAAQRYSF 246
Query: 277 LLKTKPHYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPLNFHLSSNSIKNL-PLFKP 335
+L + ++++A P G F N + IL Y +++ ++ PL +
Sbjct: 247 ILNANQAVNN--YWIRANPN-QGNVGFTNGINSAILRYSGAAATQPTTSQTSSVQPLDQT 303
Query: 336 VLPALNDTSFATSFTNKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNG 395
L L T+ S +LA +++ F F NG
Sbjct: 304 NLHPLTATAVPGSPVAGGVNLA-----------INQAFNF------------------NG 334
Query: 396 TMFQASVNNISFVMPTTALLQAHFTGKSYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGT 455
T V+ SFV PT +L +G D S L+
Sbjct: 335 T--NHFVDGASFVPPTVPVLSQIVSGAQSAA---DLLASGLV------------------ 371
Query: 456 KLVVLPFNSSVELIMQDTSILGAESHPLHLHXXXXXXXXXXXXXXDPNKDPTKFNLVDPV 515
LP ++++E+ TS HP HLH T +N DP+
Sbjct: 372 --YSLPSDANIEISFPATSAAAGGPHPFHLHGHAFAVVRSAGS--------TTYNYNDPI 421
Query: 516 ERNTV--GVPSGGW-VAIRFLADNPGVWFMHCHLEVHTSWGLKMAW 558
R+TV G P+ V IRF +NPG WF+HCH++ H G + +
Sbjct: 422 FRDTVSTGTPAANDNVTIRFKTNNPGPWFLHCHIDFHLEAGFAVVF 467
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 145/530 (27%), Positives = 220/530 (41%), Gaps = 92/530 (17%)
Query: 43 NVTRLCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI-----SIHWHGIRQLRS 97
NV+ T++ I VNG GP I + D + V+N + N SIHWHG+ Q +
Sbjct: 15 NVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGT 73
Query: 98 GWADGPAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAHL-SWLRSTLYGPIIILPKRGIP 156
WADG + QCPI G +++Y FT G GT W+H+H + L GP++I
Sbjct: 74 NWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDND-- 131
Query: 157 YPFTKPYKE----VPIIFGEWFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSA 212
P Y E I +W+ I + ++Q P DA ING G A
Sbjct: 132 -PHAALYDEDDENTIITLADWYH-----IPAPSIQGAAQP---DATLING-KGRYVGGPA 181
Query: 213 KDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQ 272
+ + V+ GK Y +RLI+ + + FSI H LT++E D +P + L I GQ
Sbjct: 182 AELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQ 241
Query: 273 TTNVLLKTKPHYPSATFFMKARPYVTGQ---GTFDNSTVAGILEYEKPLNFHLSSNSIKN 329
+ +L P ++++A+P GTF N + IL Y N ++++
Sbjct: 242 RYSFVLDAN--QPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSA--- 296
Query: 330 LPLFKPVLPALNDTSFATSFTNKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQSNQT 389
P LN+ + L A+ P +V+ RF G
Sbjct: 297 ----NPNPAQLNEADL-----HALIDPAAPGIPTPGAADVNLRFQLGFSGGRFTI----- 342
Query: 390 CQGPNGTMFQASVNNISFVMPTTALLQAHFTGKSYGVYNPDFPTSPLIAFNYTGTPPNNT 449
NGT +++ P+ P + +G N
Sbjct: 343 ----NGTAYES-------------------------------PSVPTLLQIMSGAQSAND 367
Query: 450 MVSNGTKLVVLPFNSSVELIMQDTSILGAESHPLHLHXXXXXXXXXXXXXXDPNKDPTKF 509
++ G+ + LP N VEL++ +LG HP HLH + +
Sbjct: 368 LLPAGS-VYELPRNQVVELVVP-AGVLGG-PHPFHLHGHAFSVVRSAGS--------STY 416
Query: 510 NLVDPVERNTVGVP-SGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAW 558
N V+PV+R+ V + +G V IRF+ DNPG WF HCH+E H GL + +
Sbjct: 417 NFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVF 466
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 145/530 (27%), Positives = 220/530 (41%), Gaps = 92/530 (17%)
Query: 43 NVTRLCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI-----SIHWHGIRQLRS 97
NV+ T++ I VNG GP I + D + V+N + N SIHWHG+ Q +
Sbjct: 15 NVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGT 73
Query: 98 GWADGPAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAHL-SWLRSTLYGPIIILPKRGIP 156
WADG + QCPI G +++Y FT G GT W+H+H + L GP++I
Sbjct: 74 NWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDND-- 131
Query: 157 YPFTKPYKE----VPIIFGEWFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSA 212
P Y E I +W+ I + ++Q P DA ING G A
Sbjct: 132 -PHAALYDEDDENTIITLADWYH-----IPAPSIQGAAQP---DATLING-KGRYVGGPA 181
Query: 213 KDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQ 272
+ + V+ GK Y +RLI+ + + FSI H LT++E D +P + L I GQ
Sbjct: 182 AELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQ 241
Query: 273 TTNVLLKTKPHYPSATFFMKARPYVTGQ---GTFDNSTVAGILEYEKPLNFHLSSNSIKN 329
+ +L P ++++A+P GTF N + IL Y N ++++
Sbjct: 242 RYSFVLDAN--QPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSA--- 296
Query: 330 LPLFKPVLPALNDTSFATSFTNKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQSNQT 389
P LN+ + L A+ P +V+ RF G
Sbjct: 297 ----NPNPAQLNEADL-----HALIDPAAPGIPTPGAADVNLRFQLGFSGGRFTI----- 342
Query: 390 CQGPNGTMFQASVNNISFVMPTTALLQAHFTGKSYGVYNPDFPTSPLIAFNYTGTPPNNT 449
NGT +++ P+ P + +G N
Sbjct: 343 ----NGTAYES-------------------------------PSVPTLLQIMSGAQSAND 367
Query: 450 MVSNGTKLVVLPFNSSVELIMQDTSILGAESHPLHLHXXXXXXXXXXXXXXDPNKDPTKF 509
++ G+ + LP N VEL++ +LG HP HLH + +
Sbjct: 368 LLPAGS-VYELPRNQVVELVVP-AGVLGG-PHPFHLHGHAFSVVRSAGS--------STY 416
Query: 510 NLVDPVERNTVGVP-SGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAW 558
N V+PV+R+ V + +G V IRF+ DNPG WF HCH+E H GL + +
Sbjct: 417 NFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVF 466
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 139/520 (26%), Positives = 218/520 (41%), Gaps = 84/520 (16%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI-----SIHWHGIRQLRSGWADGPA 104
++ + VNG PGP I GD+ + V++++ N+ SIHWHG Q + WADGPA
Sbjct: 21 SRQAVVVNGGTPGPLITGNMGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQKGTNWADGPA 80
Query: 105 YITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLS-WLRSTLYGPIIIL-PKRGIPYPFTKP 162
+I QCPI +G S++Y+F + Q GT W+H+HLS L GP ++ P +
Sbjct: 81 FINQCPISSGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPAADLYDVD 140
Query: 163 YKEVPIIFGEWFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKP 222
+ I +W+ + + A G +DA ING G + + D + V P
Sbjct: 141 NDDTVITLVDWYHVAAK--LGPAFPLG-----ADATLING-KGRSPSTTTADLSVISVTP 192
Query: 223 GKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTKP 282
GK Y RL++ + + FSI H +T++E D+I P +++ I Q + +L+
Sbjct: 193 GKRYRFRLVSLSCDPNYTFSIDGHNMTIIETDSINTAPLVVDSIQIFAAQRYSFVLEANQ 252
Query: 283 HYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALND 342
+ ++++A P G F + IL Y+ + +++ LN+
Sbjct: 253 AVDN--YWIRANPNFGNVG-FTGGINSAILRYD-------GAAAVEPTTTQTTSTAPLNE 302
Query: 343 TSFATSFTNKLRSLASTQFPAN-VPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQAS 401
L L +T P + V VD NGT F
Sbjct: 303 V--------NLHPLVATAVPGSPVAGGVDLAINMAFNF--------------NGTNF--F 338
Query: 402 VNNISFVMPTTALLQAHFTGKSYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVLP 461
+N SF PT +L +G A N P+ ++ S LP
Sbjct: 339 INGASFTPPTVPVLLQIISG----------------AQNAQDLLPSGSVYS-------LP 375
Query: 462 FNSSVELIMQDTSILGAESHPLHLHXXXXXXXXXXXXXXDPNKDPTKFNLVDPVERNTV- 520
N+ +E+ T+ HP HLH T +N +P+ R+ V
Sbjct: 376 SNADIEISFPATAAAPGAPHPFHLHGHAFAVVRSAGS--------TVYNYDNPIFRDVVS 427
Query: 521 -GVPSGGW-VAIRFLADNPGVWFMHCHLEVHTSWGLKMAW 558
G P+ G V IRF DNPG WF+HCH++ H G + +
Sbjct: 428 TGTPAAGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVF 467
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 139/523 (26%), Positives = 225/523 (43%), Gaps = 94/523 (17%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI-----SIHWHGIRQLRSGWADGPA 104
++ + VNG PGP + GD+ + V++++ N+ S+HWHG Q + WADGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFFQQGTNWADGPA 80
Query: 105 YITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLS-WLRSTLYGPIIIL-PKRGIPYPFTKP 162
+I QCPI G S++Y+F + Q GT W+H+HLS L GP ++ P +
Sbjct: 81 FINQCPISPGHSFLYDFQVPNQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVD 140
Query: 163 YKEVPIIFGEWFKADPETIISQALQTGGG-PNVSDAYTINGLPGPLYNCSAKDTFKLKVK 221
+ I +W+ A + G P +DA ING + SA+ + +KV
Sbjct: 141 NDDTVITLADWYHT--------AAKLGPRFPAGADATLINGKGRAPSDTSAELSV-IKVT 191
Query: 222 PGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTK 281
GK RL++ + + FSI H LT++E D+ +P +++ I Q + +L
Sbjct: 192 KGKRXRFRLVSLSCDPNFTFSIDGHNLTIIEVDSSNSQPLSVDSIQIFAAQRYSFVLNAN 251
Query: 282 PHYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALN 341
+ ++++A P G F+ + IL Y+ ++N ++ KP LN
Sbjct: 252 QAVDN--YWIRANPNFGNVG-FNGGINSAILRYDGAPAVEPTTNQTTSV---KP----LN 301
Query: 342 DTSFATSFTNKLRSLASTQFPAN-----VPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGT 396
+ L L ST P + V + ++ F F NG+
Sbjct: 302 EV--------NLHPLVSTPVPGSPSSGGVDKAINMAFNF------------------NGS 335
Query: 397 MFQASVNNISFVMPTTALLQAHFTGKSYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTK 456
F +N SFV P+ +L +G ++ +G+
Sbjct: 336 NF--FINGASFVPPSVPVLLQILSGAQTA----------------------QDLLPSGS- 370
Query: 457 LVVLPFNSSVELIMQDTSILGAESHPLHLHXXXXXXXXXXXXXXDPNKDPTKFNLVDPVE 516
+ VLP N+S+E+ T+ HP HLH T +N +P+
Sbjct: 371 VXVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAGS--------TVYNYSNPIF 422
Query: 517 RNTV--GVPSGGW-VAIRFLADNPGVWFMHCHLEVHTSWGLKM 556
R+ V G P+ G V IRFL +NPG WF+HCH++ H G +
Sbjct: 423 RDVVSTGTPAAGDNVTIRFLTNNPGPWFLHCHIDFHLEGGFAV 465
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 139/564 (24%), Positives = 224/564 (39%), Gaps = 102/564 (18%)
Query: 16 CSFVTLCLLAEPALGVTRHYKFDIKLQNVT---RLCNTKSIISVNGKFPGPRIVAREGDQ 72
S +L +L+ +L + D+ + N +S ++ G P I D+
Sbjct: 5 ASLKSLVVLSLTSLSLAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDR 64
Query: 73 LLIKVMN-----HVQNNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNFTIVGQR 127
I V++ +++ SIHWHG Q + DGPA++ QCPI +S+VY+F + GQ
Sbjct: 65 FQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQA 124
Query: 128 GTLWWHAHLS-WLRSTLYGPIIIL-PKRGIPYPFTKPYKEVPIIFGEWFKADPETIISQA 185
GT W+H+HLS L G ++ P + I +W+ + +
Sbjct: 125 GTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTVLFPNP 184
Query: 186 LQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIAN 245
+ P D INGL N SA + V+ GK Y R+++ + FSI
Sbjct: 185 NKA---PPAPDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDG 241
Query: 246 HTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPYVTGQGTFDN 305
H +TV+E D + +P ++L I GQ +V+++ + ++++A P G+ F
Sbjct: 242 HRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEA--NQAVGNYWIRANPS-NGRNGFTG 298
Query: 306 STVAGILEYEKPL--------NFHLSSNSIKNLPLFKPVLPALNDTSFATSFTNKLRSLA 357
+ I Y+ N + N +PL P P
Sbjct: 299 GINSAIFRYQGAAVAEPTTSQNSGTALNEANLIPLINPGAPG------------------ 340
Query: 358 STQFPANVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQASVNNISFVMPTTALLQA 417
P N++ R G N T ++N F+ PT +L
Sbjct: 341 -NPVPGGADINLNLRI------------------GRNATTADFTINGAPFIPPTVPVLLQ 381
Query: 418 HFTGKSYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVLPFNSSVELIMQDTSILG 477
+G T PN+ + G ++ LP N +E+ SI G
Sbjct: 382 ILSGV---------------------TNPNDLLP--GGAVISLPANQVIEI-----SIPG 413
Query: 478 AESHPLHLHXXXXXXXXXXXXXXDPNKDP--TKFNLVDPVERNTVGVPSGGW-VAIRFLA 534
+HP HLH D + P + +N V+PV R+ V + GG V RF+
Sbjct: 414 GGNHPFHLH----------GHNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVT 463
Query: 535 DNPGVWFMHCHLEVHTSWGLKMAW 558
DNPG WF+HCH++ H GL + +
Sbjct: 464 DNPGPWFLHCHIDWHLEAGLAVVF 487
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 137/524 (26%), Positives = 222/524 (42%), Gaps = 96/524 (18%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI-----SIHWHGIRQLRSGWADGPA 104
++ + VNG PGP + GD+ + V++++ N+ S+HWHG Q + WADGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFFQQGTNWADGPA 80
Query: 105 YITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLS-WLRSTLYGPIIIL-PKRGIPYPFTKP 162
+I QCPI G S++Y+F + Q GT W+H+HLS L GP ++ P +
Sbjct: 81 FINQCPISPGHSFLYDFQVPNQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVD 140
Query: 163 YKEVPIIFGEWFKADPETIISQALQTGGG-PNVSDAYTINGLPGPLYNCSAKDTFKLKVK 221
+ I +W+ A + G PN +D+ ING + SA+ + + V
Sbjct: 141 NDDTTITLADWYHT--------AAKLGPAFPNGADSTLINGKGRAPSDSSAQLSV-VSVT 191
Query: 222 PGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTK 281
GK RL++ + + FSI H T++E D++ +P T+++ I Q + L
Sbjct: 192 KGKRXRFRLVSLSCDPNFTFSIDGHNNTIIETDSVNSQPLNTDSIQIFAAQRYSFTLNAN 251
Query: 282 PHYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPLNFHLSSN-SIKNLPLFKPVLPAL 340
+ ++++A P G F+ + IL Y+ ++N S P L
Sbjct: 252 QAVDN--YWIRANPNFGNVG-FNGGINSAILRYDGAPAVEPTTNQSTSTQP--------L 300
Query: 341 NDTSFATSFTNKLRSLASTQFPAN-----VPQNVDRRFFFTVGLGTSPCQSNQTCQGPNG 395
N+T L L ST P + V + ++ F F NG
Sbjct: 301 NET--------NLHPLVSTPVPGSPAAGGVDKAINMAFNF------------------NG 334
Query: 396 TMFQASVNNISFVMPTTALLQAHFTGKSYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGT 455
+ F +N SF P+ +L +G ++ +G+
Sbjct: 335 SNF--FINGASFTPPSVPVLLQILSGAQTA----------------------QDLLPSGS 370
Query: 456 KLVVLPFNSSVELIMQDTSILGAESHPLHLHXXXXXXXXXXXXXXDPNKDPTKFNLVDPV 515
+ LP N+S+E+ T+ HP HLH T +N +P+
Sbjct: 371 -VXTLPSNASIEISFPATAAAPGAPHPFHLHGHVFAVVRSAGS--------TVYNYSNPI 421
Query: 516 ERNTV--GVPSGGW-VAIRFLADNPGVWFMHCHLEVHTSWGLKM 556
R+ V G P+ G V IRFL +NPG WF+HCH++ H G +
Sbjct: 422 FRDVVSTGTPAAGDNVTIRFLTNNPGPWFLHCHIDFHLEGGFAV 465
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 152/299 (50%), Gaps = 24/299 (8%)
Query: 30 GVTRHYKFDIKLQNVTRLCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNN-ISIH 88
GVTR Y ++ +T T+S ++ NG PGP I+A GD L+I V N++++N SIH
Sbjct: 65 GVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIH 124
Query: 89 WHGIRQLRSGWADGPAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLSW-LRSTLYGPI 147
WHGIRQL S DG +TQCPI G + Y F + Q GT W+H+H S L+GP+
Sbjct: 125 WHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQVT-QYGTTWYHSHFSLQYGDGLFGPL 183
Query: 148 IILPKRGIPYPFTKPYKE-VPIIFGEWFKADPETIISQALQTGGGPNVSDAYTINGLPGP 206
II P T Y E V +IF + + + I + G P + + +NG
Sbjct: 184 IING------PATADYDEDVGVIFLQDWAHESVFEIWDTARLGAPPALENTL-MNGTN-- 234
Query: 207 LYNCSAK---------DTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIY 257
++CSA F+L G Y LRLIN ++ F+I NHTLTV+ D +
Sbjct: 235 TFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVP 294
Query: 258 VKPFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPYVTGQGTFDNSTVAGILEYEK 316
+ P+ T+TLLI GQ +V+++ + ++++ T + + GIL Y+
Sbjct: 295 IVPYTTDTLLIGIGQRYDVIVEANA--AADNYWIRGNWGTTCSTNNEAANATGILRYDS 351
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 466 VELIMQDTSILGAESHPLHLHXXXXXXXXXXXXXXDPNKDPTKFNLVDPVERNTVGVPSG 525
V +++D + G HP+HLH + ++ P KFNLV+P R+ +P
Sbjct: 449 VVYVIEDLTGFGIW-HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGN 507
Query: 526 GWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWI 559
G++AI F DNPG W +HCH+ H S G+ M ++
Sbjct: 508 GYLAIAFKLDNPGSWLLHCHIAWHASEGMAMQFV 541
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 152/299 (50%), Gaps = 24/299 (8%)
Query: 30 GVTRHYKFDIKLQNVTRLCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNN-ISIH 88
GVTR Y ++ +T T+S ++ NG PGP I+A GD L+I V N++++N SIH
Sbjct: 65 GVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIH 124
Query: 89 WHGIRQLRSGWADGPAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLSW-LRSTLYGPI 147
WHGIRQL S DG +TQCPI G + Y F + Q GT W+H+H S L+GP+
Sbjct: 125 WHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQVT-QYGTTWYHSHFSLQYGDGLFGPL 183
Query: 148 IILPKRGIPYPFTKPYKE-VPIIFGEWFKADPETIISQALQTGGGPNVSDAYTINGLPGP 206
II P T Y E V +IF + + + I + G P + + +NG
Sbjct: 184 IING------PATADYDEDVGVIFLQDWAHESVFEIWDTARLGAPPALENTL-MNGTN-- 234
Query: 207 LYNCSAK---------DTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIY 257
++CSA F+L G Y LRLIN ++ F+I NHTLTV+ D +
Sbjct: 235 TFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVP 294
Query: 258 VKPFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPYVTGQGTFDNSTVAGILEYEK 316
+ P+ T+TLLI GQ +V+++ + ++++ T + + GIL Y+
Sbjct: 295 IVPYTTDTLLIGIGQRYDVIVEANA--AADNYWIRGNWGTTCSTNNEAANATGILRYDS 351
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 466 VELIMQDTSILGAESHPLHLHXXXXXXXXXXXXXXDPNKDPTKFNLVDPVERNTVGVPSG 525
V +++D + G HP+HLH + ++ P KFNLV+P R+ +P
Sbjct: 449 VVYVIEDLTGFGIW-HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGN 507
Query: 526 GWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWI 559
G++AI F DNPG W +HCH+ H S GL M ++
Sbjct: 508 GYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFV 541
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 134/518 (25%), Positives = 218/518 (42%), Gaps = 88/518 (16%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQN-NISIHWHGIRQLRSGWADGPAYITQ 108
++ +I+ NG+FP P I +GD++ I + N + N N S+H+HG+ Q + DG ++TQ
Sbjct: 21 SRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80
Query: 109 CPIQTGQSYVYNFTIVGQRGTLWWHAHLSWLRSTLYGPIIILPKRGIPYPFTKPYKEVPI 168
CPI G + +YNFT+ GT W+H+H + I+ PY + +E+ +
Sbjct: 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSFPYDYD---EELSL 137
Query: 169 IFGEWFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKL--KVKPGKTY 226
EW+ D T ++++ + P ++ P P N +T L +V+P TY
Sbjct: 138 SLSEWYH-DLVTDLTKSFMSVYNPTGAE-------PIPQ-NLIVNNTMNLTWEVQPDTTY 188
Query: 227 LLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTKPHYPS 286
LLR++N +F I +H +TVVE D I + T+ L I Q VL+ TK
Sbjct: 189 LLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDK 248
Query: 287 ATFFMKARPYVTGQGTFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALNDTSFA 346
M+ FD++ + I P LN TS+
Sbjct: 249 NFAIMQK---------FDDTMLDVI-----------------------PSDLQLNATSYM 276
Query: 347 TSFTNKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQASVNNIS 406
NK +L + + ++ +D + P + P+
Sbjct: 277 VY--NKTAALPTQNYVDSIDNFLDDFYL-------QPYEKEAIYGEPD------------ 315
Query: 407 FVMPTTALLQAHFTGKSYGVYNPDFPTSP----LIAFNYTGTPPNNTMV-SNGTKLVVLP 461
V+ ++ G +Y +N T+P L+ +G NN+ + + T +L
Sbjct: 316 HVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILE 375
Query: 462 FNSSVELIM--QDTSILGAESHPLHLHXXXXXXXXXXXXXXDP-NKDPTKFNLVD----- 513
+ VE+++ QDT +HP HLH D + P F+ +
Sbjct: 376 KDEIVEIVLNNQDTG-----THPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFP 430
Query: 514 --PVERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVH 549
P+ R+T+ V IRF ADNPGVWF HCH+E H
Sbjct: 431 EYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWH 468
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 124/270 (45%), Gaps = 26/270 (9%)
Query: 24 LAEPALGVTRHYKFDIKLQNVTRLCN--------TKSIISVNGKFPGPRIVAREGDQLLI 75
++ P GVT+ Y F N+T + N + ++ +NG GP IVA GD + +
Sbjct: 25 VSTPDTGVTQSYVF-----NLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEV 79
Query: 76 KVMNH-VQNNISIHWHGIRQLRSGWADGPAYITQCPIQ-TGQSYVYNFTIVGQRGTLWWH 133
V+N+ V N SIHWHGI Q + DG +T+CPI G Y + Q GT W+H
Sbjct: 80 TVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTECPIPPKGGQRTYRWR-ARQYGTSWYH 138
Query: 134 AHLS-WLRSTLYGPIIILPKRGIPYPFTKPYKEVPIIFGEWFKADPETIISQALQTGGGP 192
+H S + + G I I +PY PI + AD +Q P
Sbjct: 139 SHFSAQYGNGVVGTIQINGPASLPYDID--LGVFPITDYYYRAADDLVHFTQ----NNAP 192
Query: 193 NVSDAYTINGLP-GPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVV 251
SD ING P N + + PGK + LR++N + + S+ NHT+TV+
Sbjct: 193 PFSDNVLINGTAVNP--NTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVI 250
Query: 252 EADAIYVKPFETETLLIAPGQTTNVLLKTK 281
AD + V ++L +A GQ +V++
Sbjct: 251 AADMVPVNAMTVDSLFLAVGQRYDVVIDAS 280
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 481 HPLHLHXXX---------XXXXXXXXXXXDPNKDPTKFNLVDPVERNTVGVPSGGWVAIR 531
HP+HLH DP D + N +P R+T +P+GGW+ +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 532 FLADNPGVWFMHCHLEVHTSWGLKMAWI 559
F DNPG W HCH+ H S GL + ++
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDFL 518
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 124/270 (45%), Gaps = 26/270 (9%)
Query: 24 LAEPALGVTRHYKFDIKLQNVTRLCN--------TKSIISVNGKFPGPRIVAREGDQLLI 75
++ P GVT+ Y F N+T + N + ++ +NG GP IVA GD + +
Sbjct: 25 VSTPDTGVTQSYVF-----NLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEV 79
Query: 76 KVMNH-VQNNISIHWHGIRQLRSGWADGPAYITQCPIQ-TGQSYVYNFTIVGQRGTLWWH 133
V+N+ V N SIHWHGI Q + DG +T+CPI G Y + Q GT W+H
Sbjct: 80 TVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTECPIPPKGGQRTYRWR-ARQYGTSWYH 138
Query: 134 AHLS-WLRSTLYGPIIILPKRGIPYPFTKPYKEVPIIFGEWFKADPETIISQALQTGGGP 192
+H S + + G I I +PY PI + AD +Q P
Sbjct: 139 SHFSAQYGNGVVGTIQINGPASLPYDID--LGVFPITDYYYRAADDLVHFTQ----NNAP 192
Query: 193 NVSDAYTINGLP-GPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVV 251
SD ING P N + + PGK + LR++N + + S+ NHT+TV+
Sbjct: 193 PFSDNVLINGTAVNP--NTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVI 250
Query: 252 EADAIYVKPFETETLLIAPGQTTNVLLKTK 281
AD + V ++L +A GQ +V++
Sbjct: 251 AADMVPVNAMTVDSLFLAVGQRYDVVIDAS 280
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 481 HPLHLHXXX---------XXXXXXXXXXXDPNKDPTKFNLVDPVERNTVGVPSGGWVAIR 531
HP+HLH DP D + N +P R+T +P+GGW+ +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 532 FLADNPGVWFMHCHLEVHTSWGLKMAWI 559
F DNPG W HCH+ H S GL + ++
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDFL 518
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 124/270 (45%), Gaps = 26/270 (9%)
Query: 24 LAEPALGVTRHYKFDIKLQNVTRLCN--------TKSIISVNGKFPGPRIVAREGDQLLI 75
++ P GVT+ Y F N+T + N + ++ +NG GP IVA GD + +
Sbjct: 25 VSTPDTGVTQSYVF-----NLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEV 79
Query: 76 KVMNH-VQNNISIHWHGIRQLRSGWADGPAYITQCPIQ-TGQSYVYNFTIVGQRGTLWWH 133
V+N+ V N SIHWHGI Q + DG +T+CPI G Y + Q GT W+H
Sbjct: 80 TVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWR-ARQYGTSWYH 138
Query: 134 AHLS-WLRSTLYGPIIILPKRGIPYPFTKPYKEVPIIFGEWFKADPETIISQALQTGGGP 192
+H S + + G I I +PY PI + AD +Q P
Sbjct: 139 SHFSAQYGNGVVGTIQINGPASLPYDID--LGVFPITDYYYRAADDLVHFTQ----NNAP 192
Query: 193 NVSDAYTINGLP-GPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVV 251
SD ING P N + + PGK + LR++N + + S+ NHT+TV+
Sbjct: 193 PFSDNVLINGTAVNP--NTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVI 250
Query: 252 EADAIYVKPFETETLLIAPGQTTNVLLKTK 281
AD + V ++L +A GQ +V++
Sbjct: 251 AADMVPVNAMTVDSLFLAVGQRYDVVIDAS 280
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 481 HPLHLHXXX---------XXXXXXXXXXXDPNKDPTKFNLVDPVERNTVGVPSGGWVAIR 531
HP+HLH DP D + N +P R+T +P+GGW+ +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 532 FLADNPGVWFMHCHLEVHTSWGLKMAWI 559
F DNPG W HCH+ H S GL + ++
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDFL 518
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 125/268 (46%), Gaps = 17/268 (6%)
Query: 53 IISVNGKFPGPRIVAREGDQLLIKVMNHVQ-NNISIHWHGIRQLRSGWADGPAYITQCPI 111
++ VN K GP I A GD + + V+N+++ N S+HWHG+RQL + + DG +T+CPI
Sbjct: 98 VMLVNDKIIGPTIRANWGDNIEVTVINNLKTNGTSMHWHGLRQLGNVFNDGANGVTECPI 157
Query: 112 Q-TGQSYVYNFTIVGQRGTLWWHAHLSWLRSTLYGPIIILPKRGIPYPFTKPYKEVPIIF 170
G Y F Q GT W+H+H S YG ++ + I P + PY +F
Sbjct: 158 PPKGGRKTYKFRAT-QYGTSWYHSHFS----AQYGNGVVGTIQ-IDGPASLPYDIDLGVF 211
Query: 171 ---GEWFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYL 227
++++ E + Q+ G P SD NG A + + + PGK +
Sbjct: 212 PLMDYYYRSADELV--HFTQSNGAP-PSDNVLFNGT-ARHPETGAGQWYNVTLTPGKRHR 267
Query: 228 LRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTKPHYPSA 287
LR+IN + ++ S+ H +TV+ D + V F +L +A GQ +V + P
Sbjct: 268 LRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYDVTIDANS--PVG 325
Query: 288 TFFMKARPYVTGQGTFDNSTVAGILEYE 315
++ G+ +N A I Y+
Sbjct: 326 NYWFNVTFGDGLCGSSNNKFPAAIFRYQ 353
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 481 HPLHLHXXXXXX---------XXXXXXXXDPNKDPTKFNLVDPVERNTVGVPSGGWVAIR 531
HP+HLH DP KD + +PV R+ +P+GGW+ +
Sbjct: 472 HPMHLHGHDFLVLGRSPDELPSAGVRHIFDPAKDLPRLKGNNPVRRDVTMLPAGGWLLLA 531
Query: 532 FLADNPGVWFMHCHLEVHTSWGLKMAWI 559
F DNPG W HCH+ H S GL + ++
Sbjct: 532 FKTDNPGAWLFHCHIAWHVSGGLSVDFL 559
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|B Chain B, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|C Chain C, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|D Chain D, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|E Chain E, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|F Chain F, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
Length = 318
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 117/252 (46%), Gaps = 24/252 (9%)
Query: 36 KFDIKLQNVTRLCNTKS---IISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGI 92
+FD+ +++ + K + NG+ P P I EGD + + V N +IHWHG+
Sbjct: 4 EFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGM 63
Query: 93 RQLRSGWADGPAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLSWLRST----LYGPII 148
Q + +DG + TQ I+ G ++ Y F GT+W+H H++ ++GP+I
Sbjct: 64 LQRGTWQSDGVPHATQHAIEPGDTFTYKFK-AEPAGTMWYHCHVNVNEHVTMRGMWGPLI 122
Query: 149 ILPKRGIPYPFTKPY-KEVPIIFGEWFKADPETIISQALQTGGGP-NVSDAYTINGLPGP 206
+ PK P P K K+ ++ +W + + GG P +V D YTIN P
Sbjct: 123 VEPKN--PLPIEKTVTKDYILMLSDWVSS-----WANKPGEGGIPGDVFDYYTINAKSFP 175
Query: 207 LYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETL 266
+T ++VK G LRLI A + + + + + KP + +T+
Sbjct: 176 -------ETQPIRVKKGDVIRLRLIGAGDHVHAIHTHGHISQIAFKDGFPLDKPIKGDTV 228
Query: 267 LIAPGQTTNVLL 278
LI PG+ +V+L
Sbjct: 229 LIGPGERYDVIL 240
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 509 FNLVDPVERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLK 555
F L P++ +TV + G + DNPG+W +H H++ HT+ G K
Sbjct: 217 FPLDKPIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNGDK 263
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 116/257 (45%), Gaps = 39/257 (15%)
Query: 52 SIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQCPI 111
++++ G FPGP + R D + + + N + ++HWHG+ S D P I
Sbjct: 36 TLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPI--SPKVDDPF----LEI 89
Query: 112 QTGQSYVYNFTIVGQ-RGTLWWHAHLS-----WLRSTLYGPIIILPKRGIPYPFTKPYKE 165
G+S+ Y FT+ + GT W+H HL L + L G +++
Sbjct: 90 PPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVV----------ESSLDA 139
Query: 166 VPIIFGEWFKADPETIISQALQTGGG---PNVSDAYTINGLPGP--LYNCSAKDTFKLKV 220
+P E +A+ ++ + L GG P+ + +NG G L N + + T V
Sbjct: 140 IP----ELREAEEHLLVLKDLALQGGRPAPHTPMDW-MNGKEGDLVLVNGALRPTL---V 191
Query: 221 KPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYV-KPFETETLLIAPGQTTNVLLK 279
T LRL+NA+ ++ +H L ++ AD ++ +P E LL+APG+ VL++
Sbjct: 192 AQKATLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVR 251
Query: 280 TKPHYPSATFFMKARPY 296
+ F ++A PY
Sbjct: 252 LR---KEGRFLLQALPY 265
>pdb|3GDC|A Chain A, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|B Chain B, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|C Chain C, Crystal Structure Of Multicopper Oxidase
Length = 288
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 79/187 (42%), Gaps = 32/187 (17%)
Query: 55 SVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQCPIQTG 114
S NG+ PGP + AREGD L I N + +IH+HG+ + DG I I G
Sbjct: 58 SYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHRAT---MDGTPGIGAGSIAPG 114
Query: 115 QSYVYNFTIVGQRGTLWWHAHLS----WLRSTLYGPIIILPKRGIPYPFTKPYKEVPIIF 170
QS+ Y F GT +H H S + LYG I+ PK G P
Sbjct: 115 QSFTYEFDAT-PFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP-------------- 159
Query: 171 GEWFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRL 230
AD E ++ G + ++ Y++NGLP + F +KVK + + L
Sbjct: 160 ----PADDEMVMVMNGYNTDGGDDNEFYSVNGLPFHFMD------FPVKVKQHELVRIHL 209
Query: 231 INAALND 237
IN D
Sbjct: 210 INVLEYD 216
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 102/257 (39%), Gaps = 37/257 (14%)
Query: 34 HYKFDIKLQNVTRLCNTKSII-SVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGI 92
H +IK ++ + K++ + NG P P+I EGD+L I V N ++ +IHWHG+
Sbjct: 52 HATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGV 111
Query: 93 ----RQLRSGWADGPAYITQCPIQTGQSYVYNFTI-VGQRGTLWWHAHLSWLRST----- 142
Q DG + PI G+ +Y F I GT W+H H + S
Sbjct: 112 PVPPDQ------DGSPH---DPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMG 162
Query: 143 LYGPIIILPKRGIPYPFTKPYKEVPIIFGEWFKADPETIISQALQTGGGPNVSDAYTING 202
L G +I K+ KE ++ + + D I PN + +NG
Sbjct: 163 LAGAFVIKAKKDA----LSHLKEKDLMISD-LRLDENAQI---------PNNNLNDWLNG 208
Query: 203 LPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEAD-AIYVKPF 261
G + + FK K+K +R+ NA L I +V D + K
Sbjct: 209 REGEFVLINGQ--FKPKIKLATNERIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTI 266
Query: 262 ETETLLIAPGQTTNVLL 278
E L ++P VL+
Sbjct: 267 YKEELFLSPASRVEVLI 283
>pdb|3AW5|A Chain A, Structure Of A Multicopper Oxidase From The
Hyperthermophilic Archaeon Pyrobaculum Aerophilum
Length = 448
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 98/250 (39%), Gaps = 42/250 (16%)
Query: 63 PRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADG--PAYITQCPIQTGQSYVYN 120
P I+ R G ++ + + N + +HWHG W + P++ I G+SY Y+
Sbjct: 38 PTIILRRGQRVDMTLKNKLTEPTIVHWHG---FDVNWHNDAHPSF----AITPGESYNYS 90
Query: 121 FTIVGQRGTLWWHAHLSWLRSTLYG----PIIILPKRGIPYPFTKPYKEVPIIFGEWFKA 176
F +V + GT +H H L + + ++I+ G F ++P+
Sbjct: 91 FDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSDLGFKYGVNDLPL-------- 142
Query: 177 DPETIISQALQTGGGP--NVSDAYTINGLPG--PLYNCSAKDTFKLKVKPGKTYLLRLIN 232
+IS GG P N + I G G L N FKL G +Y LRL+N
Sbjct: 143 ----VISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVKDAVFKLS---GGSYRLRLVN 195
Query: 233 AALNDELFFSIANHTLTVVEADAIYV------KPFETETLLIAPGQTTNVLLKTKPHYPS 286
+ SI VV I V +P E L +AP + V+++
Sbjct: 196 GSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEVVVELG----E 251
Query: 287 ATFFMKARPY 296
+ +K P+
Sbjct: 252 GVYLLKNTPF 261
>pdb|3CG8|A Chain A, Laccase From Streptomyces Coelicolor
pdb|3CG8|B Chain B, Laccase From Streptomyces Coelicolor
pdb|3CG8|C Chain C, Laccase From Streptomyces Coelicolor
Length = 343
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 71/170 (41%), Gaps = 28/170 (16%)
Query: 4 SLLRSPAFLGVICSFVTLCLLAEPALGVTRHYK-FDIKLQNVTRLCN-TKSIISVNGKFP 61
SL +P G + + PA G RH K + KL + K SV P
Sbjct: 20 SLSIAPEVAGAAPAAKGITARTAPAGGEVRHLKMYAEKLADGQMGYGFEKGKASV----P 75
Query: 62 GPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNF 121
GP I EGD L I+ N + S+H HG+ S +DG A + + ++ G + Y +
Sbjct: 76 GPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEIS--SDGTA-MNKSDVEPGGTRTYTW 132
Query: 122 TIV--GQR--GTL------WWHAH---------LSWLRSTLYGPIIILPK 152
G+R GT +WH H +R+ LYGP+I+ K
Sbjct: 133 RTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRK 182
>pdb|2XX0|A Chain A, Structure Of The N90s-H254f Mutant Of Nitrite Reductase
From Alcaligenes Xylosoxidans
pdb|2XX0|B Chain B, Structure Of The N90s-H254f Mutant Of Nitrite Reductase
From Alcaligenes Xylosoxidans
Length = 336
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI--SIHWHGIRQLRSGWADGPAYIT 107
T ++ NG PGP +V EGD + + ++N N + S+ +HG + A G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHSVDFHG-----ATGALGGAKLT 106
Query: 108 QCPIQTGQSYVYNFTIVGQRGTLWWH----AHLSW-LRSTLYGPIIILPKRGIPYPFTKP 162
+ G+ F + GT +H + W + S + G +++LP+ G+ P KP
Sbjct: 107 N--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
>pdb|4GY4|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 278
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 65/147 (44%), Gaps = 28/147 (19%)
Query: 27 PALGVTRHYK-FDIKLQNVTRLCN-TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNN 84
PA G RH K + KL + K SV PGP I EGD L I+ N +
Sbjct: 5 PAGGEVRHLKMYAEKLADGQMGYGFEKGKASV----PGPLIEVNEGDTLHIEFTNTMDVR 60
Query: 85 ISIHWHGIRQLRSGWADGPAYITQCPIQTG--QSYVYNFTIVGQR--GTL------WWHA 134
S+H HG+ S +DG A + + ++ G ++Y + G+R GT +WH
Sbjct: 61 ASLHVHGLDAEIS--SDGTA-MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHY 117
Query: 135 H---------LSWLRSTLYGPIIILPK 152
H +R+ LYGP+I+ K
Sbjct: 118 HDHVVGTEHGTGGIRNGLYGPVIVRRK 144
>pdb|2BO0|A Chain A, Crystal Structure Of The C130a Mutant Of Nitrite Reductase
From Alcaligenes Xylosoxidans
Length = 336
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI--SIHWHGIRQLRSGWADGPAYIT 107
T ++ NG PGP +V EGD + + ++N N + ++ +HG + A G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG-----ATGALGGAKLT 106
Query: 108 QCPIQTGQSYVYNFTIVGQRGTLWWHAH----LSW-LRSTLYGPIIILPKRGIPYPFTKP 162
+ G+ F + GT +HA + W + S + G +++LP+ G+ P KP
Sbjct: 107 N--VNPGEQATLRFK-ADRSGTFVYHAAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
>pdb|2XX1|A Chain A, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|B Chain B, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|C Chain C, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|D Chain D, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|E Chain E, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|F Chain F, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
Length = 336
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI--SIHWHGIRQLRSGWADGPAYIT 107
T ++ NG PGP +V EGD + + ++N N + S+ +HG + A G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHSVDFHG-----ATGALGGAKLT 106
Query: 108 QCPIQTGQSYVYNFTIVGQRGTLWWH----AHLSW-LRSTLYGPIIILPKRGIPYPFTKP 162
+ G+ F + GT +H + W + S + G +++LP+ G+ P KP
Sbjct: 107 N--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
>pdb|2XXG|A Chain A, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans
pdb|2XXG|C Chain C, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans
Length = 336
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI--SIHWHGIRQLRSGWADGPAYIT 107
T ++ NG PGP +V EGD + + ++N N + S+ +HG + A G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHSVDFHG-----ATGALGGAKLT 106
Query: 108 QCPIQTGQSYVYNFTIVGQRGTLWWH----AHLSW-LRSTLYGPIIILPKRGIPYPFTKP 162
+ G+ F + GT +H + W + S + G +++LP+ G+ P KP
Sbjct: 107 N--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
>pdb|3ABG|A Chain A, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|3ABG|B Chain B, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|2XLL|A Chain A, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|B Chain B, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|C Chain C, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|D Chain D, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
Length = 534
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 110/261 (42%), Gaps = 31/261 (11%)
Query: 34 HYKFDIK--LQNVTRLCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHG 91
+Y+ +IK V + ++ +G PGP G + +++ +N+ + S+H HG
Sbjct: 38 YYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHG 97
Query: 92 --IRQLRSGWADGPAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLSWLRSTLYGPIII 149
R GWA+ IT+ G Y + TLW+H H + +
Sbjct: 98 SFSRAAFDGWAED---ITEP----GSFKDYYYPNRQSARTLWYHDHAMHITAE----NAY 146
Query: 150 LPKRGIPYPFTKPYKE---VPIIFGEWFKADPETIISQALQTGGGPNVSDAYTINGLPGP 206
+ G+ Y T P ++ +P +GE+ D I++ T G V+ +N G
Sbjct: 147 RGQAGL-YMLTDPAEDALNLPSGYGEF---DIPMILTSKQYTANGNLVTTNGELNSFWGD 202
Query: 207 LYNCSAKDTFKLKVKPGKTYLLRLINAALNDE--LFFSIANHTLT-----VVEADA-IYV 258
+ + + + V+P K Y R ++AA++ L+F+ + T V+ +D+ +
Sbjct: 203 VIHVNGQPWPFKNVEPRK-YRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLE 261
Query: 259 KPFETETLLIAPGQTTNVLLK 279
P +T L I+ + V+
Sbjct: 262 HPADTSLLYISMAERYEVVFD 282
>pdb|3KW8|A Chain A, Two-Domain Laccase From Streptomyces Coelicolor At 2.3 A
Resolution
Length = 276
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 65/147 (44%), Gaps = 28/147 (19%)
Query: 27 PALGVTRHYK-FDIKLQNVTRLCN-TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNN 84
PA G RH K + KL + K SV PGP I EGD L I+ N +
Sbjct: 2 PAGGEVRHLKMYAEKLADGQMGYGFEKGKASV----PGPLIEVNEGDTLHIEFTNTMDVR 57
Query: 85 ISIHWHGIRQLRSGWADGPAYITQCPIQTG--QSYVYNFTIVGQR--GTL------WWHA 134
S+H HG+ S +DG A + + ++ G ++Y + G+R GT +WH
Sbjct: 58 ASLHVHGLDYEIS--SDGTA-MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHY 114
Query: 135 H---------LSWLRSTLYGPIIILPK 152
H +R+ LYGP+I+ K
Sbjct: 115 HDHVVGTEHGTGGIRNGLYGPVIVRRK 141
>pdb|2BP0|A Chain A, M168l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI--SIHWHGIRQLRSGWADGPAYIT 107
T ++ NG PGP +V EGD + + ++N N + ++ +HG + A G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG-----ATGALGGAKLT 106
Query: 108 QCPIQTGQSYVYNFTIVGQRGTLWWH----AHLSW-LRSTLYGPIIILPKRGIPYPFTKP 162
+ G+ F + GT +H + W + S L G +++LP+ G+ P KP
Sbjct: 107 N--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGLSGTLMVLPRDGLKDPEGKP 163
>pdb|2BP0|B Chain B, M168l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI--SIHWHGIRQLRSGWADGPAYIT 107
T ++ NG PGP +V EGD + + ++N N + ++ +HG + A G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG-----ATGALGGAKLT 106
Query: 108 QCPIQTGQSYVYNFTIVGQRGTLWWH----AHLSW-LRSTLYGPIIILPKRGIPYPFTKP 162
+ G+ F + GT +H + W + S L G +++LP+ G+ P KP
Sbjct: 107 N--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGLSGTLMVLPRDGLKDPEGKP 163
>pdb|1KV7|A Chain A, Crystal Structure Of Cueo, A Multi-Copper Oxidase From E.
Coli Involved In Copper Homeostasis
pdb|1N68|A Chain A, Copper Bound To The Multicopper Oxidase Cueo
pdb|2FQD|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQE|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQF|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQG|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|3NSD|A Chain A, Silver Bound To The Multicopper Oxidase Cueo (Untagged)
pdb|3OD3|A Chain A, Cueo At 1.1 A Resolution Including Residues In Previously
Disordered Region
pdb|3PAU|A Chain A, Cueo In The Resting Oxidized State
pdb|3PAV|A Chain A, The Reduced Form Of Cueo
Length = 488
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 89/246 (36%), Gaps = 26/246 (10%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQC 109
T + NG GP + + G + + + N + ++HWHG+ G DG Q
Sbjct: 35 TATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDGGP---QG 89
Query: 110 PIQTGQSYVYNFTIVGQRGTLWWHAHL-----SWLRSTLYGPIIILPKRGIPYPFTKPY- 163
I G + T W+H H + L G ++I + K +
Sbjct: 90 IIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWG 149
Query: 164 -KEVPIIFGE-WFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVK 221
+VP+I + F AD + + T D NG P +
Sbjct: 150 IDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQH-----------AA 198
Query: 222 PGKTYLLRLINAALNDELFFSIA-NHTLTVVEAD-AIYVKPFETETLLIAPGQTTNVLLK 279
P LRL+N L F+ + N L V+ +D + +P + L + G+ VL++
Sbjct: 199 PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVE 258
Query: 280 TKPHYP 285
+ P
Sbjct: 259 VNDNKP 264
>pdb|2JFC|A Chain A, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|B Chain B, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|C Chain C, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|D Chain D, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|E Chain E, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|F Chain F, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
Length = 335
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI--SIHWHGIRQLRSGWADGPAYIT 107
T ++ NG PGP +V EGD + + ++N N + ++ +HG + A G A +T
Sbjct: 51 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG-----ATGALGGAKLT 105
Query: 108 QCPIQTGQSYVYNFTIVGQRGTLWWH----AHLSW-LRSTLYGPIIILPKRGIPYPFTKP 162
+ G+ F + GT +H + W + S L G +++LP+ G+ P KP
Sbjct: 106 N--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGLSGTLMVLPRDGLKDPQGKP 162
>pdb|3NSF|A Chain A, Apo Form Of The Multicopper Oxidase Cueo
Length = 505
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 89/247 (36%), Gaps = 26/247 (10%)
Query: 49 NTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQ 108
T + NG GP + + G + + + N + ++HWHG+ G DG Q
Sbjct: 34 KTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDGGP---Q 88
Query: 109 CPIQTGQSYVYNFTIVGQRGTLWWHAHL-----SWLRSTLYGPIIILPKRGIPYPFTKPY 163
I G + T W+H H + L G ++I + K +
Sbjct: 89 GIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQW 148
Query: 164 --KEVPIIFGE-WFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKV 220
+VP+I + F AD + + T D NG P +
Sbjct: 149 GIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQH-----------A 197
Query: 221 KPGKTYLLRLINAALNDELFFSIA-NHTLTVVEAD-AIYVKPFETETLLIAPGQTTNVLL 278
P LRL+N L F+ + N L V+ +D + +P + L + G+ VL+
Sbjct: 198 APRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLV 257
Query: 279 KTKPHYP 285
+ + P
Sbjct: 258 EVNDNKP 264
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 528 VAIRFLADNPG--VWFMHCHLEVHTSWGLKMAWIVLDGKH 565
V ++F D P + HCHL H G+ + + VL G H
Sbjct: 454 VLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTVLQGDH 493
>pdb|3QQX|A Chain A, Reduced Native Intermediate Of The Multicopper Oxidase
Cueo
Length = 505
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 89/246 (36%), Gaps = 26/246 (10%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQC 109
T + NG GP + + G + + + N + ++HWHG+ G DG Q
Sbjct: 35 TATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDGGP---QG 89
Query: 110 PIQTGQSYVYNFTIVGQRGTLWWHAHL-----SWLRSTLYGPIIILPKRGIPYPFTKPY- 163
I G + T W+H H + L G ++I + K +
Sbjct: 90 IIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWG 149
Query: 164 -KEVPIIFGE-WFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVK 221
+VP+I + F AD + + T D NG P +
Sbjct: 150 IDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQH-----------AA 198
Query: 222 PGKTYLLRLINAALNDELFFSIA-NHTLTVVEAD-AIYVKPFETETLLIAPGQTTNVLLK 279
P LRL+N L F+ + N L V+ +D + +P + L + G+ VL++
Sbjct: 199 PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVE 258
Query: 280 TKPHYP 285
+ P
Sbjct: 259 VNDNKP 264
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 528 VAIRFLADNPG--VWFMHCHLEVHTSWGLKMAWIVLDGKH 565
V ++F D P + HCHL H G+ + + VL G H
Sbjct: 454 VLVKFNHDAPKEHAYMAHCHLLEHDDTGMMLGFTVLQGDH 493
>pdb|1PF3|A Chain A, Crystal Structure Of The M441l Mutant Of The Multicopper
Oxidase Cueo
Length = 498
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 89/246 (36%), Gaps = 26/246 (10%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQC 109
T + NG GP + + G + + + N + ++HWHG+ G DG Q
Sbjct: 35 TATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDGGP---QG 89
Query: 110 PIQTGQSYVYNFTIVGQRGTLWWHAHL-----SWLRSTLYGPIIILPKRGIPYPFTKPY- 163
I G + T W+H H + L G ++I + K +
Sbjct: 90 IIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWG 149
Query: 164 -KEVPIIFGE-WFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVK 221
+VP+I + F AD + + T D NG P +
Sbjct: 150 IDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQH-----------AA 198
Query: 222 PGKTYLLRLINAALNDELFFSIA-NHTLTVVEAD-AIYVKPFETETLLIAPGQTTNVLLK 279
P LRL+N L F+ + N L V+ +D + +P + L + G+ VL++
Sbjct: 199 PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVE 258
Query: 280 TKPHYP 285
+ P
Sbjct: 259 VNDNKP 264
>pdb|2ZOO|A Chain A, Crystal Structure Of Nitrite Reductase From
Pseudoalteromonas Haloplanktis Tac125
Length = 442
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 103/270 (38%), Gaps = 34/270 (12%)
Query: 27 PALGVTRHYKFDIKLQ---NVTRLCNTKSII--SVNGKFPGPRIVAREGDQLLIKVMNHV 81
PA+ K I L+ V R+ + + S PG I REGD++ + NH
Sbjct: 19 PAINRDHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHP 78
Query: 82 QNNI--SIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLS-- 137
+ + +I H + +G G P G + +NF + G +H +
Sbjct: 79 SSKMPHNIDLHAV----TGPGGGAESSFTAP---GHTSTFNFKAL-NPGLYIYHCATAPV 130
Query: 138 --WLRSTLYGPIIILPKRGIPYPFTKPYKEVPIIF---GEWFKADPETI-ISQALQTGGG 191
+ + +YG I++ PK G+ P + Y V F GE+ +A + +++A+
Sbjct: 131 GMHIANGMYGLILVEPKEGLA-PVDREYYLVQGDFYTKGEFGEAGLQPFDMAKAIDED-- 187
Query: 192 PNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVV 251
+D NG G S D L K G+T L + N N F + V
Sbjct: 188 ---ADYVVFNGSVG-----STTDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTV 239
Query: 252 EADAIYVKPFETETLLIAPGQTTNVLLKTK 281
+ +K +T LI G V K +
Sbjct: 240 YVEGGSLKNHNVQTTLIPAGGAAIVEFKVE 269
>pdb|3NSY|A Chain A, The Multi-Copper Oxidase Cueo With Six Met To Ser
Mutations (M358s, M361s,M362s,M364s,M366s,M368s)
Length = 511
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 89/246 (36%), Gaps = 26/246 (10%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQC 109
T + NG GP + + G + + + N + ++HWHG+ G DG Q
Sbjct: 35 TATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDGGP---QG 89
Query: 110 PIQTGQSYVYNFTIVGQRGTLWWHAHL-----SWLRSTLYGPIIILPKRGIPYPFTKPY- 163
I G + T W+H H + L G ++I + K +
Sbjct: 90 IIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWG 149
Query: 164 -KEVPIIFGE-WFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVK 221
+VP+I + F AD + + T D NG P +
Sbjct: 150 IDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQH-----------AA 198
Query: 222 PGKTYLLRLINAALNDELFFSIA-NHTLTVVEAD-AIYVKPFETETLLIAPGQTTNVLLK 279
P LRL+N L F+ + N L V+ +D + +P + L + G+ VL++
Sbjct: 199 PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVE 258
Query: 280 TKPHYP 285
+ P
Sbjct: 259 VNDNKP 264
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 528 VAIRFLADNPG--VWFMHCHLEVHTSWGLKMAWIVLDGKH 565
V ++F D P + HCHL H G+ + + VL G H
Sbjct: 454 VLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTVLQGDH 493
>pdb|1OE2|A Chain A, Atomic Resolution Structure Of D92e Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI--SIHWHGIRQLRSGWADGPAYIT 107
T ++ NG PGP +V EGD + + ++N N + ++ +HG + A G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVEFHG-----ATGALGGAKLT 106
Query: 108 QCPIQTGQSYVYNFTIVGQRGTLWWH----AHLSW-LRSTLYGPIIILPKRGIPYPFTKP 162
+ G+ F + GT +H + W + S + G +++LP+ G+ P KP
Sbjct: 107 N--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
>pdb|1GS8|A Chain A, Crystal Structure Of Mutant D92n Alcaligenes Xylosoxidans
Nitrite Reductase
Length = 336
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI--SIHWHGIRQLRSGWADGPAYIT 107
T ++ NG PGP +V EGD + + ++N N + ++++HG + A G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVNFHG-----ATGALGGAKLT 106
Query: 108 QCPIQTGQSYVYNFTIVGQRGTLWWH----AHLSW-LRSTLYGPIIILPKRGIPYPFTKP 162
+ G+ F + GT +H + W + S + G +++LP+ G+ P KP
Sbjct: 107 N--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
>pdb|3UAA|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data1)
pdb|3UAB|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data2)
pdb|3UAC|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data4)
pdb|3UAD|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data5)
pdb|3UAE|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data6)
Length = 489
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 89/246 (36%), Gaps = 26/246 (10%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQC 109
T + NG GP + + G + + + N + ++HWHG+ G DG Q
Sbjct: 35 TATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDGGP---QG 89
Query: 110 PIQTGQSYVYNFTIVGQRGTLWWHAHL-----SWLRSTLYGPIIILPKRGIPYPFTKPY- 163
I G + T W+H H + L G ++I + K +
Sbjct: 90 IIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWG 149
Query: 164 -KEVPIIFGE-WFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVK 221
+VP+I + F AD + + T D NG P +
Sbjct: 150 IDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQHAA----------- 198
Query: 222 PGKTYLLRLINAALNDELFFSIA-NHTLTVVEAD-AIYVKPFETETLLIAPGQTTNVLLK 279
P LRL+N L F+ + N L V+ +D + +P + L + G+ VL++
Sbjct: 199 PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVE 258
Query: 280 TKPHYP 285
+ P
Sbjct: 259 VNDNKP 264
>pdb|2UXT|A Chain A, Sufi Protein From Escherichia Coli
pdb|2UXT|B Chain B, Sufi Protein From Escherichia Coli
pdb|2UXV|A Chain A, Sufi Protein From Escherichia Coli
pdb|2UXV|B Chain B, Sufi Protein From Escherichia Coli
Length = 451
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 95/237 (40%), Gaps = 27/237 (11%)
Query: 52 SIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQCPI 111
S+ +NG++ GP I +GD + + N + N+S+ G+ Q+ GPA + +
Sbjct: 39 SVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGL-QVPGPLMGGPARM----M 93
Query: 112 QTGQSYVYNFTIVGQRGTLWWHAH-----LSWLRSTLYGPIIILPK--RGIPYPFTKPYK 164
+ I TLW+HA+ + + L G ++ + + +P P
Sbjct: 94 SPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVD 153
Query: 165 EVPIIFGEWFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGK 224
+ P+I + K + + G G V D +NG+ P S
Sbjct: 154 DFPVIIQD--KRLDNFGTPEYNEPGSGGFVGDTLLVNGVQSPYVEVSR-----------G 200
Query: 225 TYLLRLINAALNDELFFSIAN-HTLTVVEADAIYV-KPFETETLLIAPGQTTNVLLK 279
LRL+NA+ + + + L V+ D ++ P + L +APG+ +L+
Sbjct: 201 WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGERREILVD 257
>pdb|4GXF|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 279
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 65/147 (44%), Gaps = 28/147 (19%)
Query: 27 PALGVTRHYK-FDIKLQNVTRLCN-TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNN 84
PA G RH K + KL + K SV PGP I EGD L I+ N +
Sbjct: 6 PAGGEVRHLKMYAEKLADGQMGYGFEKGKASV----PGPLIEVNEGDTLHIEFTNTMDVR 61
Query: 85 ISIHWHGIRQLRSGWADGPAYITQCPIQTG--QSYVYNFTIVGQR--GTL------WWHA 134
S+H HG+ S +DG A + + ++ G ++Y + G+R GT +WH
Sbjct: 62 ASLHVHGLDFEIS--SDGTA-MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHY 118
Query: 135 H---------LSWLRSTLYGPIIILPK 152
H +R+ LYGP+I+ K
Sbjct: 119 HDHVVGTEHGTGGIRNGLYGPVIVRRK 145
>pdb|3NSC|A Chain A, C500s Mutant Of Cueo Bound To Cu(Ii)
pdb|3NT0|A Chain A, C500s (T1d) Mutant Of Cueo Soaked In And Bound To Cu(I)
Length = 505
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 89/247 (36%), Gaps = 26/247 (10%)
Query: 49 NTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQ 108
T + NG GP + + G + + + N + ++HWHG+ G DG Q
Sbjct: 34 KTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDGGP---Q 88
Query: 109 CPIQTGQSYVYNFTIVGQRGTLWWHAHL-----SWLRSTLYGPIIILPKRGIPYPFTKPY 163
I G + T W+H H + L G ++I + K +
Sbjct: 89 GIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQW 148
Query: 164 --KEVPIIFGE-WFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKV 220
+VP+I + F AD + + T D NG P +
Sbjct: 149 GIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQHAA---------- 198
Query: 221 KPGKTYLLRLINAALNDELFFSIA-NHTLTVVEAD-AIYVKPFETETLLIAPGQTTNVLL 278
P LRL+N L F+ + N L V+ +D + +P + L + G+ VL+
Sbjct: 199 -PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLV 257
Query: 279 KTKPHYP 285
+ + P
Sbjct: 258 EVNDNKP 264
>pdb|2YXV|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXV|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
Length = 446
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 89/247 (36%), Gaps = 26/247 (10%)
Query: 49 NTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQ 108
T + NG GP + + G + + + N + ++HWHG+ G DG Q
Sbjct: 34 KTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDGGP---Q 88
Query: 109 CPIQTGQSYVYNFTIVGQRGTLWWHAHL-----SWLRSTLYGPIIILPKRGIPYPFTKPY 163
I G + T W+H H + L G ++I + K +
Sbjct: 89 GIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQW 148
Query: 164 --KEVPIIFGE-WFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKV 220
+VP+I + F AD + + T D NG P +
Sbjct: 149 GIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQHAA---------- 198
Query: 221 KPGKTYLLRLINAALNDELFFSIA-NHTLTVVEAD-AIYVKPFETETLLIAPGQTTNVLL 278
P LRL+N L F+ + N L V+ +D + +P + L + G+ VL+
Sbjct: 199 -PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLV 257
Query: 279 KTKPHYP 285
+ + P
Sbjct: 258 EVNDNKP 264
>pdb|2XXF|A Chain A, Cu Metallated H254f Mutant Of Nitrite Reductase
pdb|2XXF|B Chain B, Cu Metallated H254f Mutant Of Nitrite Reductase
Length = 336
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI--SIHWHGIRQLRSGWADGPAYIT 107
T ++ NG PGP +V EGD + + ++N N + ++ +HG + A G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG-----ATGALGGAKLT 106
Query: 108 QCPIQTGQSYVYNFTIVGQRGTLWWH----AHLSW-LRSTLYGPIIILPKRGIPYPFTKP 162
+ G+ F + GT +H + W + S + G +++LP+ G+ P KP
Sbjct: 107 N--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
>pdb|1GS7|A Chain A, Crystal Structure Of H254f Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI--SIHWHGIRQLRSGWADGPAYIT 107
T ++ NG PGP +V EGD + + ++N N + ++ +HG + A G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG-----ATGALGGAKLT 106
Query: 108 QCPIQTGQSYVYNFTIVGQRGTLWWH----AHLSW-LRSTLYGPIIILPKRGIPYPFTKP 162
+ G+ F + GT +H + W + S + G +++LP+ G+ P KP
Sbjct: 107 N--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
>pdb|1WA1|X Chain X, Crystal Structure Of H313q Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
pdb|1WA2|X Chain X, Crystal Structure Of H313q Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase With Nitrite Bound
Length = 336
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI--SIHWHGIRQLRSGWADGPAYIT 107
T ++ NG PGP +V EGD + + ++N N + ++ +HG + A G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG-----ATGALGGAKLT 106
Query: 108 QCPIQTGQSYVYNFTIVGQRGTLWWH----AHLSW-LRSTLYGPIIILPKRGIPYPFTKP 162
+ G+ F + GT +H + W + S + G +++LP+ G+ P KP
Sbjct: 107 N--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
>pdb|2XWZ|A Chain A, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|B Chain B, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|C Chain C, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|D Chain D, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|E Chain E, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|F Chain F, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
Length = 336
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI--SIHWHGIRQLRSGWADGPAYIT 107
T ++ NG PGP +V EGD + + ++N N + ++ +HG + A G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG-----ATGALGGAKLT 106
Query: 108 QCPIQTGQSYVYNFTIVGQRGTLWWH----AHLSW-LRSTLYGPIIILPKRGIPYPFTKP 162
+ G+ F + GT +H + W + S + G +++LP+ G+ P KP
Sbjct: 107 N--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
>pdb|1OE1|A Chain A, Atomic Resolution Structure Of The Wildtype Native Nitrite
Reductase From Alcaligenes Xylosoxidans
pdb|1OE3|A Chain A, Atomic Resolution Structure Of 'half Apo' Nir
Length = 336
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI--SIHWHGIRQLRSGWADGPAYIT 107
T ++ NG PGP +V EGD + + ++N N + ++ +HG + A G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG-----ATGALGGAKLT 106
Query: 108 QCPIQTGQSYVYNFTIVGQRGTLWWH----AHLSW-LRSTLYGPIIILPKRGIPYPFTKP 162
+ G+ F + GT +H + W + S + G +++LP+ G+ P KP
Sbjct: 107 N--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
>pdb|2VN3|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans
Length = 337
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI--SIHWHGIRQLRSGWADGPAYIT 107
T ++ NG PGP +V EGD + + ++N N + ++ +HG + A G A +T
Sbjct: 53 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG-----ATGALGGAKLT 107
Query: 108 QCPIQTGQSYVYNFTIVGQRGTLWWH----AHLSW-LRSTLYGPIIILPKRGIPYPFTKP 162
+ G+ F + GT +H + W + S + G +++LP+ G+ P KP
Sbjct: 108 N--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 164
>pdb|1HAU|A Chain A, X-Ray Structure Of A Blue Copper Nitrite Reductase At High
Ph And In Copper Free Form At 1.9 A Resolution
pdb|1HAW|A Chain A, X-Ray Structure Of A Blue Copper Nitrite Reductase At High
Ph And In Copper Free Form At 1.9a Resolution
pdb|2VM3|A Chain A, Structure Of Alcaligenes Xylosoxidans In Space Group R3 -
1 Of 2
pdb|2VM4|A Chain A, Structure Of Alcaligenes Xylosoxidans Nitrite Reductase In
Space Group R3 - 2 Of 2
pdb|2VW4|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans - 2 Of 3
pdb|2VW4|B Chain B, Nitrite Reductase From Alcaligenes Xylosoxidans - 2 Of 3
pdb|2VW6|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans - 3 Of 3
pdb|2VW6|B Chain B, Nitrite Reductase From Alcaligenes Xylosoxidans - 3 Of 3
pdb|2VW7|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans - 1 Of 3
pdb|2VW7|B Chain B, Nitrite Reductase From Alcaligenes Xylosoxidans - 1 Of 3
pdb|2ZON|A Chain A, Crystal Structure Of Electron Transfer Complex Of Nitrite
Reductase With Cytochrome C
pdb|2ZON|B Chain B, Crystal Structure Of Electron Transfer Complex Of Nitrite
Reductase With Cytochrome C
pdb|2ZON|C Chain C, Crystal Structure Of Electron Transfer Complex Of Nitrite
Reductase With Cytochrome C
Length = 336
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI--SIHWHGIRQLRSGWADGPAYIT 107
T ++ NG PGP +V EGD + + ++N N + ++ +HG + A G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG-----ATGALGGAKLT 106
Query: 108 QCPIQTGQSYVYNFTIVGQRGTLWWH----AHLSW-LRSTLYGPIIILPKRGIPYPFTKP 162
+ G+ F + GT +H + W + S + G +++LP+ G+ P KP
Sbjct: 107 N--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
>pdb|1WAE|A Chain A, Crystal Structure Of H129v Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 15/120 (12%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI--SIHWHGIRQLRSGWA-----DG 102
T ++ NG PGP +V EGD + + ++N N + ++ +HG G G
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGALGGAKLTNVNPG 111
Query: 103 PAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLSWLRSTLYGPIIILPKRGIPYPFTKP 162
+ ++VY + G + WH + S + G +++LP+ G+ P KP
Sbjct: 112 EQATLRFKADRSGTFVY---VCAPEGMVPWH-----VVSGMSGTLMVLPRDGLKDPQGKP 163
>pdb|1BQ5|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans Gifu 1051
Length = 342
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI--SIHWHGIRQLRSGWADGPAYIT 107
T ++ NG PGP +V EGD + + ++N N + ++ +HG + A G A +T
Sbjct: 58 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG-----ATGALGGAKLT 112
Query: 108 QCPIQTGQSYVYNFTIVGQRGTLWWH----AHLSW-LRSTLYGPIIILPKRGIPYPFTKP 162
+ G+ F + GT +H + W + S + G +++LP+ G+ P KP
Sbjct: 113 N--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 169
>pdb|3TAS|A Chain A, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|B Chain B, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|C Chain C, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TBB|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBC|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone
Length = 313
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 60 FPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQCPIQTG--QSY 117
PGP I EGD L I+ N + +S+H HG+ S +DG ++ ++ G ++Y
Sbjct: 39 IPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEIS--SDGTKQ-SRSDVEPGGTRTY 95
Query: 118 VYNFTIVGQR--GTL------WWHAH---------LSWLRSTLYGPIIILPK 152
+ + G+R GT +WH H +R+ LYGP+I+ K
Sbjct: 96 TWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRK 147
>pdb|3CDZ|A Chain A, Crystal Structure Of Human Factor Viii
Length = 754
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 57/141 (40%), Gaps = 16/141 (11%)
Query: 31 VTRHYKFDIKLQNVTRLCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWH 90
+ R YK + T+ I GP + GD LLI N +I+ H
Sbjct: 419 IGRKYKKVRFMAYTDETFKTREAIQHESGILGPLLYGEVGDTLLIIFKNQASRPYNIYPH 478
Query: 91 GIRQLRSGWA----DGPAYITQCPIQTGQSYVYNFTIVGQRG---------TLWWHAHLS 137
GI +R ++ G ++ PI G+ + Y +T+ + G T ++ + ++
Sbjct: 479 GITDVRPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSDPRCLTRYYSSFVN 538
Query: 138 WLR---STLYGPIIILPKRGI 155
R S L GP++I K +
Sbjct: 539 MERDLASGLIGPLLICYKESV 559
>pdb|2R7E|A Chain A, Crystal Structure Analysis Of Coagulation Factor Viii
Length = 742
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 57/141 (40%), Gaps = 16/141 (11%)
Query: 31 VTRHYKFDIKLQNVTRLCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWH 90
+ R YK + T+ I GP + GD LLI N +I+ H
Sbjct: 420 IGRKYKKVRFMAYTDETFKTREAIQHESGILGPLLYGEVGDTLLIIFKNQASRPYNIYPH 479
Query: 91 GIRQLRSGWA----DGPAYITQCPIQTGQSYVYNFTIVGQRG---------TLWWHAHLS 137
GI +R ++ G ++ PI G+ + Y +T+ + G T ++ + ++
Sbjct: 480 GITDVRPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSDPRCLTRYYSSFVN 539
Query: 138 WLR---STLYGPIIILPKRGI 155
R S L GP++I K +
Sbjct: 540 MERDLASGLIGPLLICYKESV 560
>pdb|1WA0|X Chain X, Crystal Structure Of W138h Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 15/120 (12%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI--SIHWHGIRQLRSGWADGPAYIT 107
T ++ NG PGP +V EGD + + ++N N + ++ +HG + A G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG-----ATGALGGAKLT 106
Query: 108 QCPIQTGQSYVYNFTIVGQRGTLWWHAHLSWL-----RSTLYGPIIILPKRGIPYPFTKP 162
+ G+ F + GT +H + S + G +++LP+ G+ P KP
Sbjct: 107 N--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPHHVVSGMSGTLMVLPRDGLKDPQGKP 163
>pdb|1NDT|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans
Length = 336
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 15/120 (12%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI--SIHWHGIRQLRSGWADGPAYIT 107
T ++ NG PGP +V EGD + + ++N N + ++ +HG A G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG-----ALGGAKLT 106
Query: 108 QCPIQTGQSYVYNFTIVGQRGTLWWHAHLS----W-LRSTLYGPIIILPKRGIPYPFTKP 162
+ G+ F + GT +H S W + S + G +++LP+ G+ P P
Sbjct: 107 N--VNPGEQATLRFK-ADRSGTFVYHCAPSGMVPWHVVSGMSGTLMVLPRDGLKDPAGAP 163
>pdb|1GS6|X Chain X, Crystal Structure Of M144a Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 15/120 (12%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI--SIHWHGIRQLRSGWADGPAYIT 107
T ++ NG PGP +V EGD + + ++N N + ++ +HG + A G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG-----ATGALGGAKLT 106
Query: 108 QCPIQTGQSYVYNFTIVGQRGTLWWH----AHLSW-LRSTLYGPIIILPKRGIPYPFTKP 162
+ G+ F + GT +H + W + S G +++LP+ G+ P KP
Sbjct: 107 N--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGASGTLMVLPRDGLKDPQGKP 163
>pdb|2BP8|A Chain A, M168q Structure Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 15/120 (12%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI--SIHWHGIRQLRSGWADGPAYIT 107
T ++ NG PGP +V EGD + + ++N N + ++ +HG + A G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG-----ATGALGGAKLT 106
Query: 108 QCPIQTGQSYVYNFTIVGQRGTLWWH----AHLSW-LRSTLYGPIIILPKRGIPYPFTKP 162
+ G+ F + GT +H + W + S G +++LP+ G+ P KP
Sbjct: 107 N--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGQSGTLMVLPRDGLKDPEGKP 163
>pdb|2BP8|B Chain B, M168q Structure Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 15/120 (12%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI--SIHWHGIRQLRSGWADGPAYIT 107
T ++ NG PGP +V EGD + + ++N N + ++ +HG + A G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG-----ATGALGGAKLT 106
Query: 108 QCPIQTGQSYVYNFTIVGQRGTLWWH----AHLSW-LRSTLYGPIIILPKRGIPYPFTKP 162
+ G+ F + GT +H + W + S G +++LP+ G+ P KP
Sbjct: 107 N--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGQSGTLMVLPRDGLKDPEGKP 163
>pdb|2VMJ|A Chain A, Type 1 Copper-Binding Loop Of Nitrite Reductase Mutant:
130- Capegmvpwhvvsgm-144 To 130-Ctphpfm-136
Length = 329
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 13/115 (11%)
Query: 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNI--SIHWHGIRQLRSGWADGPAYIT 107
T ++ NG PGP +V EGD + + ++N N + ++ +HG + A G A +T
Sbjct: 53 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG-----ATGALGGAKLT 107
Query: 108 QCPIQTGQSYVYNFTIVGQRGTLWWHAHLSWLRSTLYGPIIILPKRGIPYPFTKP 162
+ G+ F + GT +H S G +++LP+ G+ P KP
Sbjct: 108 N--VNPGEQATLRFK-ADRSGTFVYHCTPHPFMS---GTLMVLPRDGLKDPQGKP 156
>pdb|1KCW|A Chain A, X-Ray Crystal Structure Of Human Ceruloplasmin At 3.0
Angstroms
Length = 1046
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 525 GGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVL 561
G + + PG+W +HCH+ H G++ + VL
Sbjct: 1002 GTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVL 1038
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 80/224 (35%), Gaps = 41/224 (18%)
Query: 31 VTRHYKFDIKLQNVTRLCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWH 90
+ R YK + LQ T V F GP I A GD++ + + N + H H
Sbjct: 44 IGRLYKKALYLQYTDETFRTTIEKPVWLGFLGPIIKAETGDKVYVHLKNLASRPYTFHSH 103
Query: 91 GIRQLRSGWADGPAY--------ITQCPIQTGQSYVYNFTIVGQRG---------TLWWH 133
GI + +G Y + G+ Y Y ++ T +H
Sbjct: 104 GITYYKE--HEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNCVTRIYH 161
Query: 134 AHLSW---LRSTLYGPIIILPKRGIPYPFTKPY-KEVPIIFG------EWFKAD------ 177
+H+ + S L GP+II K + K +E ++F W+ D
Sbjct: 162 SHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYC 221
Query: 178 --PETI--ISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFK 217
PE + ++ Q + YT LPG L C A+D K
Sbjct: 222 SEPEKVDKDNEDFQESNRMYSVNGYTFGSLPG-LSMC-AEDRVK 263
>pdb|2J5W|A Chain A, Ceruloplasmin Revisited: Structural And Functional Roles Of
Various Metal Cation Binding Sites
Length = 1065
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 525 GGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVL 561
G + + PG+W +HCH+ H G++ + VL
Sbjct: 1021 GTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVL 1057
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 53/145 (36%), Gaps = 22/145 (15%)
Query: 31 VTRHYKFDIKLQNVTRLCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWH 90
+ R YK + LQ T V F GP I A GD++ + + N + H H
Sbjct: 63 IGRLYKKALYLQYTDETFRTTIEKPVWLGFLGPIIKAETGDKVYVHLKNLASRPYTFHSH 122
Query: 91 GIRQLRSGWADGPAY--------ITQCPIQTGQSYVYNFTIVGQRG---------TLWWH 133
GI + +G Y + G+ Y Y ++ T +H
Sbjct: 123 GITYYKE--HEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNCVTRIYH 180
Query: 134 AHLSW---LRSTLYGPIIILPKRGI 155
+H+ + S L GP+II K +
Sbjct: 181 SHIDAPKDIASGLIGPLIICKKDSL 205
>pdb|1NDR|A Chain A, Crystallographic Structure Of A Blue Copper Nitrite
Reductase From Alcaligenes Xylosoxidans
pdb|1NDR|B Chain B, Crystallographic Structure Of A Blue Copper Nitrite
Reductase From Alcaligenes Xylosoxidans
pdb|1NDR|C Chain C, Crystallographic Structure Of A Blue Copper Nitrite
Reductase From Alcaligenes Xylosoxidans
pdb|1NDS|A Chain A, Crystallographic Structure Of A Substrate Bound Blue
Copper Nitrite Reductase From Alcaligenes Xylosoxidans
pdb|1NDS|B Chain B, Crystallographic Structure Of A Substrate Bound Blue
Copper Nitrite Reductase From Alcaligenes Xylosoxidans
pdb|1NDS|C Chain C, Crystallographic Structure Of A Substrate Bound Blue
Copper Nitrite Reductase From Alcaligenes Xylosoxidans
Length = 330
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 59/139 (42%), Gaps = 19/139 (13%)
Query: 28 ALGVTRHYKFDIKLQNVTRLCN----TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQN 83
A G + +F + ++ + + T ++ NG PGP +V EGD + + ++N N
Sbjct: 22 AAGAPKVVQFRMSIEEKKMVADDDGTTAQAMTFNGSVPGPTLVVHEGDYIELTLVNPATN 81
Query: 84 NI--SIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNFTIVGQRGTLWWH----AHLS 137
++ ++ +H + GQ V F + GT +H +
Sbjct: 82 SMPHNVDFHAATGALG-------GAGLTQVVPGQEAVLRFK-ADRSGTFVYHCAPAGMVP 133
Query: 138 W-LRSTLYGPIIILPKRGI 155
W + S + G +++LP+ G+
Sbjct: 134 WHVVSGMNGALMVLPRDGL 152
>pdb|1KBW|A Chain A, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|B Chain B, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|C Chain C, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|D Chain D, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|E Chain E, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|F Chain F, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBV|A Chain A, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|B Chain B, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|C Chain C, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|D Chain D, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|E Chain E, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|F Chain F, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
Length = 327
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 97/242 (40%), Gaps = 38/242 (15%)
Query: 12 LGVICSFVTLCLLAEPALGVTRHYKFDIKLQNVTRLCNTKSII-----SVNGKFPGPRIV 66
L VI + T PA+ K +K++ V + + + +G PG I
Sbjct: 14 LPVIDAVTTHAPEVPPAIDRDYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIR 73
Query: 67 AREGDQLLIKVMNH----VQNNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNFT 122
REGD + ++ N+ V +N+ H + + A P G++ ++F
Sbjct: 74 VREGDTVEVEFSNNPSSTVPHNVDFHAATGQGGGA------AATFTAP---GRTSTFSFK 124
Query: 123 IVGQRGTLWWHAHLS----WLRSTLYGPIIILPKRGIPYPFTKPYKEVPIIFGEWFKADP 178
+ Q G +H ++ + + +YG I++ PK G+P K KE I+ G+++
Sbjct: 125 AL-QPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLP----KVDKEFYIVQGDFYTKGK 179
Query: 179 ETIISQALQ----TGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAA 234
+ +Q LQ + NG G L +A LK K G+T + + N
Sbjct: 180 KG--AQGLQPFDMDKAVAEQPEYVVFNGHVGALTGDNA-----LKAKAGETVRMYVGNGG 232
Query: 235 LN 236
N
Sbjct: 233 PN 234
>pdb|1SDD|A Chain A, Crystal Structure Of Bovine Factor Vai
Length = 306
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 62 GPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQC-PIQT------- 113
GP + A GD + + N +SIH GI+ S +++G +Y P++
Sbjct: 59 GPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIK--YSKFSEGASYSDHTLPMEKMDDAVAP 116
Query: 114 GQSYVYNFTIVGQRG---------TLWWHAHLSWLR---STLYGPIIILPK 152
GQ Y Y + I G T ++++++ + S L GP++I K
Sbjct: 117 GQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKK 167
>pdb|4AKO|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site: E498l Mutant
Length = 507
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 86/217 (39%), Gaps = 31/217 (14%)
Query: 57 NGKFPGPRIVAREGDQLLIKVMNHV------------------QNNISIHWHGIRQLRSG 98
NG FPGP I + + + +K MN++ + +H HG +
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSEEPEVKTVVHLHG--GVTPD 109
Query: 99 WADG--PAYITQCPIQTG---QSYVYNFTIVGQRGTLWWHAH-LSWLRSTLY----GPII 148
+DG A+ ++ QTG + VY++ + LW+H H ++ R +Y G I
Sbjct: 110 DSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYI 169
Query: 149 ILPKRGIPYPFTKPYKEVPIIFGEWFKADPETIISQALQTGGGPNVSDAYTINGLPGPLY 208
I + +VP++ + + ++ + P++ + + G
Sbjct: 170 IHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETI 229
Query: 209 NCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIAN 245
+ K L+V+P K Y R+INA+ S+ N
Sbjct: 230 LVNGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDN 265
>pdb|4A66|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site: D116a Mutant
Length = 513
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 82/219 (37%), Gaps = 31/219 (14%)
Query: 57 NGKFPGPRIVAREGDQLLIKVMN--------------------HVQNNIS--IHWHGIRQ 94
NG FPGP I + + + +K MN H + + +H HG
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVT 111
Query: 95 LRSGWADGPAYITQCPIQTG---QSYVYNFTIVGQRGTLWWHAH-LSWLRSTLY----GP 146
A+ ++ QTG + VY++ + LW+H H ++ R +Y G
Sbjct: 112 PDDSAGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGA 171
Query: 147 IIILPKRGIPYPFTKPYKEVPIIFGEWFKADPETIISQALQTGGGPNVSDAYTINGLPGP 206
II + +VP++ + + ++ + P++ + + G
Sbjct: 172 YIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGE 231
Query: 207 LYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIAN 245
+ K L+V+P K Y R+INA+ S+ N
Sbjct: 232 TILVNGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDN 269
>pdb|4A67|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site: D116e Mutant
Length = 513
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 82/219 (37%), Gaps = 31/219 (14%)
Query: 57 NGKFPGPRIVAREGDQLLIKVMN--------------------HVQNNIS--IHWHGIRQ 94
NG FPGP I + + + +K MN H + + +H HG
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVT 111
Query: 95 LRSGWADGPAYITQCPIQTG---QSYVYNFTIVGQRGTLWWHAH-LSWLRSTLY----GP 146
A+ ++ QTG + VY++ + LW+H H ++ R +Y G
Sbjct: 112 PDDSEGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGA 171
Query: 147 IIILPKRGIPYPFTKPYKEVPIIFGEWFKADPETIISQALQTGGGPNVSDAYTINGLPGP 206
II + +VP++ + + ++ + P++ + + G
Sbjct: 172 YIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGE 231
Query: 207 LYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIAN 245
+ K L+V+P K Y R+INA+ S+ N
Sbjct: 232 TILVNGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDN 269
>pdb|3T9W|A Chain A, Small Laccase From Amycolatopsis Sp. Atcc 39116
pdb|3TA4|F Chain F, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|D Chain D, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|E Chain E, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
Length = 299
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 537 PGVWFMHCHLEVHTSWGLKMAWIV--LDGKHP 566
PG+W HCH++ H+ G+ ++V DG P
Sbjct: 262 PGMWMYHCHVQNHSDMGMAGMFLVRNADGTMP 293
>pdb|4AKQ|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site: E498d Mutant
Length = 513
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 86/221 (38%), Gaps = 35/221 (15%)
Query: 57 NGKFPGPRIVAREGDQLLIKVMNHV----------------------QNNISIHWHGIRQ 94
NG FPGP I + + + +K MN++ + +H HG
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHG--G 109
Query: 95 LRSGWADG--PAYITQCPIQTG---QSYVYNFTIVGQRGTLWWHAH-LSWLRSTLY---- 144
+ +DG A+ ++ QTG + VY++ + LW+H H ++ R +Y
Sbjct: 110 VTPDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLV 169
Query: 145 GPIIILPKRGIPYPFTKPYKEVPIIFGEWFKADPETIISQALQTGGGPNVSDAYTINGLP 204
G II + +VP++ + + ++ + P++ + +
Sbjct: 170 GAYIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFC 229
Query: 205 GPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIAN 245
G + K L+V+P K Y R+INA+ S+ N
Sbjct: 230 GETILVNGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDN 269
>pdb|1GSK|A Chain A, Crystal Structure Of Cota, An Endospore Coat Protein From
Bacillus Subtilis
pdb|1OF0|A Chain A, Crystal Structure Of Bacillus Subtilis Cota After 1h
Soaking With Ebs
pdb|1W6L|A Chain A, 3d Structure Of Cota Incubated With Cucl2
pdb|1W6W|A Chain A, 3d Structure Of Cota Incubated With Sodium Azide
pdb|1W8E|A Chain A, 3d Structure Of Cota Incubated With Hydrogen Peroxide
pdb|2BHF|A Chain A, 3d Structure Of The Reduced Form Of Cota
pdb|2X88|A Chain A, Crystal Structure Of Holocota
pdb|3ZDW|A Chain A, Substrate And Dioxygen Binding To The Endospore Coat
Laccase Cota From Bacillus Subtilis
Length = 513
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 86/221 (38%), Gaps = 35/221 (15%)
Query: 57 NGKFPGPRIVAREGDQLLIKVMNHV----------------------QNNISIHWHGIRQ 94
NG FPGP I + + + +K MN++ + +H HG
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHG--G 109
Query: 95 LRSGWADG--PAYITQCPIQTG---QSYVYNFTIVGQRGTLWWHAH-LSWLRSTLY---- 144
+ +DG A+ ++ QTG + VY++ + LW+H H ++ R +Y
Sbjct: 110 VTPDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLV 169
Query: 145 GPIIILPKRGIPYPFTKPYKEVPIIFGEWFKADPETIISQALQTGGGPNVSDAYTINGLP 204
G II + +VP++ + + ++ + P++ + +
Sbjct: 170 GAYIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFC 229
Query: 205 GPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIAN 245
G + K L+V+P K Y R+INA+ S+ N
Sbjct: 230 GETILVNGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDN 269
>pdb|4AKP|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site:e498t Mutant
Length = 513
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 86/221 (38%), Gaps = 35/221 (15%)
Query: 57 NGKFPGPRIVAREGDQLLIKVMNHV----------------------QNNISIHWHGIRQ 94
NG FPGP I + + + +K MN++ + +H HG
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHG--G 109
Query: 95 LRSGWADG--PAYITQCPIQTG---QSYVYNFTIVGQRGTLWWHAH-LSWLRSTLY---- 144
+ +DG A+ ++ QTG + VY++ + LW+H H ++ R +Y
Sbjct: 110 VTPDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLV 169
Query: 145 GPIIILPKRGIPYPFTKPYKEVPIIFGEWFKADPETIISQALQTGGGPNVSDAYTINGLP 204
G II + +VP++ + + ++ + P++ + +
Sbjct: 170 GAYIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFC 229
Query: 205 GPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIAN 245
G + K L+V+P K Y R+INA+ S+ N
Sbjct: 230 GETILVNGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDN 269
>pdb|2WSD|A Chain A, Proximal Mutations At The Type 1 Cu Site Of Cota-Laccase:
I494a Mutant
Length = 513
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 86/221 (38%), Gaps = 35/221 (15%)
Query: 57 NGKFPGPRIVAREGDQLLIKVMN--------------------HVQNNIS--IHWHGIRQ 94
NG FPGP I + + + +K MN H + + +H HG
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHG--G 109
Query: 95 LRSGWADG--PAYITQCPIQTG---QSYVYNFTIVGQRGTLWWHAH-LSWLRSTLY---- 144
+ +DG A+ ++ QTG + VY++ + LW+H H ++ R +Y
Sbjct: 110 VTPDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLV 169
Query: 145 GPIIILPKRGIPYPFTKPYKEVPIIFGEWFKADPETIISQALQTGGGPNVSDAYTINGLP 204
G II + +VP++ + + ++ + P++ + +
Sbjct: 170 GAYIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFC 229
Query: 205 GPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIAN 245
G + K L+V+P K Y R+INA+ S+ N
Sbjct: 230 GETILVNGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDN 269
>pdb|2X87|A Chain A, Crystal Structure Of The Reconstituted Cota
Length = 513
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 86/221 (38%), Gaps = 35/221 (15%)
Query: 57 NGKFPGPRIVAREGDQLLIKVMN--------------------HVQNNIS--IHWHGIRQ 94
NG FPGP I + + + +K MN H + + +H HG
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHG--G 109
Query: 95 LRSGWADG--PAYITQCPIQTG---QSYVYNFTIVGQRGTLWWHAH-LSWLRSTLY---- 144
+ +DG A+ ++ QTG + VY++ + LW+H H ++ R +Y
Sbjct: 110 VTPDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLV 169
Query: 145 GPIIILPKRGIPYPFTKPYKEVPIIFGEWFKADPETIISQALQTGGGPNVSDAYTINGLP 204
G II + +VP++ + + ++ + P++ + +
Sbjct: 170 GAYIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFC 229
Query: 205 GPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIAN 245
G + K L+V+P K Y R+INA+ S+ N
Sbjct: 230 GETILVNGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDN 269
>pdb|4A68|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site: D116n Mutant
Length = 513
Score = 28.9 bits (63), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 82/219 (37%), Gaps = 31/219 (14%)
Query: 57 NGKFPGPRIVAREGDQLLIKVMNHV----------------------QNNISIHWHGIRQ 94
NG FPGP I + + + +K MN++ + +H HG
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVT 111
Query: 95 LRSGWADGPAYITQCPIQTG---QSYVYNFTIVGQRGTLWWHAH-LSWLRSTLY----GP 146
A+ ++ QTG + VY++ + LW+H H ++ R +Y G
Sbjct: 112 PDDSNGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGA 171
Query: 147 IIILPKRGIPYPFTKPYKEVPIIFGEWFKADPETIISQALQTGGGPNVSDAYTINGLPGP 206
II + +VP++ + + ++ + P++ + + G
Sbjct: 172 YIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGE 231
Query: 207 LYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIAN 245
+ K L+V+P K Y R+INA+ S+ N
Sbjct: 232 TILVNGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDN 269
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,595,400
Number of Sequences: 62578
Number of extensions: 811426
Number of successful extensions: 1870
Number of sequences better than 100.0: 113
Number of HSP's better than 100.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 1540
Number of HSP's gapped (non-prelim): 254
length of query: 580
length of database: 14,973,337
effective HSP length: 104
effective length of query: 476
effective length of database: 8,465,225
effective search space: 4029447100
effective search space used: 4029447100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)