Query 047497
Match_columns 580
No_of_seqs 229 out of 1727
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 20:33:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047497.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047497hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 1E-100 5E-105 839.0 55.3 512 30-580 1-538 (552)
2 3sqr_A Laccase; multicopper ox 100.0 1.2E-97 4E-102 808.5 48.0 464 29-563 64-545 (580)
3 3pxl_A Laccase; 4-copper prote 100.0 3.2E-94 1.1E-98 773.3 48.4 456 33-561 4-470 (499)
4 1zpu_A Iron transport multicop 100.0 2.5E-94 8.5E-99 783.5 48.2 462 31-563 1-482 (534)
5 1v10_A Laccase; multicopper bl 100.0 1.1E-94 3.8E-99 785.5 44.5 476 28-580 19-508 (521)
6 3t6v_A Laccase; beta barrel, o 100.0 6.5E-94 2.2E-98 771.0 46.5 456 33-562 5-471 (495)
7 2q9o_A Laccase-1; multicopper 100.0 8E-92 2.7E-96 768.6 46.3 471 28-563 29-522 (559)
8 1hfu_A Laccase 1; oxidoreducta 100.0 1.1E-91 3.9E-96 759.4 42.1 468 33-580 5-487 (503)
9 2xu9_A Laccase; oxidoreductase 100.0 2.5E-83 8.5E-88 683.8 39.3 403 30-561 14-439 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 2.2E-83 7.6E-88 684.8 33.2 406 31-564 17-443 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 4.6E-81 1.6E-85 677.9 39.8 421 32-564 36-477 (534)
12 2wsd_A Spore coat protein A; o 100.0 3.5E-80 1.2E-84 671.0 39.1 429 32-562 25-510 (513)
13 3zx1_A Oxidoreductase, putativ 100.0 4.3E-79 1.5E-83 651.5 41.1 419 29-561 47-480 (481)
14 3aw5_A Multicopper oxidase; be 100.0 1E-79 3.5E-84 655.5 31.0 395 32-561 20-448 (448)
15 3gyr_A PHS, phenoxazinone synt 100.0 7.9E-79 2.7E-83 679.2 39.4 461 31-564 31-593 (612)
16 3od3_A Blue copper oxidase CUE 100.0 1.7E-77 5.8E-82 638.7 34.6 427 30-560 15-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 4.1E-76 1.4E-80 643.4 40.5 443 31-563 31-592 (612)
18 2j5w_A Ceruloplasmin, ferroxid 100.0 4.9E-53 1.7E-57 492.2 40.0 270 26-318 15-358 (1065)
19 3g5w_A Multicopper oxidase typ 100.0 1.1E-53 3.8E-58 435.0 29.5 271 31-318 1-278 (318)
20 2zwn_A Two-domain type laccase 100.0 4.1E-52 1.4E-56 428.1 33.2 271 31-318 2-279 (339)
21 2r7e_A Coagulation factor VIII 100.0 1.7E-54 5.8E-59 485.1 15.2 240 34-297 48-315 (742)
22 1kbv_A ANIA, major outer membr 100.0 2.5E-48 8.7E-53 397.8 28.8 261 29-318 35-309 (327)
23 2dv6_A Nitrite reductase; elec 100.0 5.3E-49 1.8E-53 421.6 23.0 400 30-565 26-436 (447)
24 3gdc_A Multicopper oxidase; be 100.0 9.5E-48 3.2E-52 386.6 29.4 236 30-296 32-273 (288)
25 2j5w_A Ceruloplasmin, ferroxid 100.0 1.5E-46 5.3E-51 437.5 19.7 401 49-564 616-1060(1065)
26 2zoo_A Probable nitrite reduct 100.0 7.2E-45 2.4E-49 388.7 29.6 264 28-318 24-299 (442)
27 3kw8_A Laccase, putative coppe 100.0 1.8E-44 6.2E-49 360.4 23.1 240 27-317 2-266 (276)
28 1mzy_A Copper-containing nitri 100.0 1.8E-43 6.1E-48 363.6 28.4 271 27-318 27-320 (333)
29 3tas_A Small laccase, multi-co 100.0 7.3E-44 2.5E-48 362.3 24.4 241 27-316 8-271 (313)
30 3t9w_A Small laccase, multi-co 100.0 7.9E-44 2.7E-48 359.2 23.7 246 24-317 21-288 (299)
31 1oe1_A Dissimilatory copper-co 100.0 7.1E-43 2.4E-47 359.8 24.2 268 29-318 29-320 (336)
32 2bw4_A Copper-containing nitri 100.0 2.2E-42 7.4E-47 356.8 24.5 268 29-318 35-326 (340)
33 3cg8_A Laccase; oxidoreductase 100.0 3E-40 1E-44 339.2 25.1 235 30-317 46-307 (343)
34 1sdd_B Coagulation factor V; c 100.0 3E-40 1E-44 368.5 25.9 263 29-315 3-326 (647)
35 1sdd_A Coagulation factor V; c 100.0 2.8E-41 9.6E-46 342.4 10.3 214 51-296 49-285 (306)
36 2dv6_A Nitrite reductase; elec 100.0 2.6E-38 9E-43 338.7 31.2 259 30-318 161-435 (447)
37 2r7e_B Coagulation factor VIII 100.0 5.2E-40 1.8E-44 368.4 12.9 250 27-296 128-441 (770)
38 2r7e_A Coagulation factor VIII 100.0 5.9E-37 2E-41 343.3 5.9 217 58-297 447-697 (742)
39 3gdc_A Multicopper oxidase; be 100.0 3.3E-28 1.1E-32 244.2 17.2 234 195-562 54-288 (288)
40 3cg8_A Laccase; oxidoreductase 100.0 7.2E-28 2.5E-32 247.2 17.8 218 214-564 75-308 (343)
41 3g5w_A Multicopper oxidase typ 99.9 5.2E-27 1.8E-31 238.4 18.4 247 196-563 23-277 (318)
42 2zwn_A Two-domain type laccase 99.9 9.8E-27 3.4E-31 239.0 19.0 243 195-562 23-277 (339)
43 3kw8_A Laccase, putative coppe 99.9 3.8E-26 1.3E-30 227.8 19.3 220 214-564 34-267 (276)
44 3t9w_A Small laccase, multi-co 99.9 3.7E-26 1.3E-30 230.2 18.5 220 214-564 56-289 (299)
45 3tas_A Small laccase, multi-co 99.9 2.5E-25 8.5E-30 225.9 21.4 220 214-564 40-273 (313)
46 1sdd_A Coagulation factor V; c 99.9 2.5E-23 8.6E-28 210.6 4.1 239 198-563 52-301 (306)
47 1sdd_B Coagulation factor V; c 99.8 6.9E-21 2.4E-25 212.3 17.6 250 214-562 67-327 (647)
48 2bw4_A Copper-containing nitri 99.8 1.2E-19 4E-24 186.8 24.3 93 456-564 231-326 (340)
49 1kbv_A ANIA, major outer membr 99.8 4.2E-20 1.4E-24 188.6 20.0 249 196-564 59-309 (327)
50 1mzy_A Copper-containing nitri 99.8 5.3E-18 1.8E-22 173.8 23.8 93 456-564 225-320 (333)
51 2r7e_B Coagulation factor VIII 99.8 1.7E-20 6E-25 210.4 5.2 87 457-561 369-455 (770)
52 1oe1_A Dissimilatory copper-co 99.8 1E-16 3.5E-21 164.5 24.8 93 456-564 225-320 (336)
53 2zoo_A Probable nitrite reduct 99.7 3E-17 1E-21 175.0 18.6 249 196-564 49-299 (442)
54 2uxt_A Protein SUFI, SUFI; oxi 99.7 4.6E-16 1.6E-20 165.5 19.9 251 32-316 152-441 (451)
55 2xu9_A Laccase; oxidoreductase 99.7 2.1E-15 7.3E-20 160.1 21.9 214 49-296 175-425 (439)
56 1hfu_A Laccase 1; oxidoreducta 99.6 1.2E-13 4.2E-18 148.9 24.4 240 51-296 165-455 (503)
57 1v10_A Laccase; multicopper bl 99.6 1.2E-13 4.2E-18 149.5 24.1 236 51-296 191-476 (521)
58 3cvb_A Plastocyanin; cupredoxi 99.6 8.1E-16 2.8E-20 129.9 4.2 90 58-151 14-105 (105)
59 3zx1_A Oxidoreductase, putativ 99.5 2.8E-13 9.6E-18 144.3 21.5 226 50-296 210-466 (481)
60 3t6v_A Laccase; beta barrel, o 99.5 1.8E-12 6.2E-17 138.9 23.7 240 50-295 167-455 (495)
61 3od3_A Blue copper oxidase CUE 99.5 2.4E-12 8.1E-17 137.1 20.8 235 50-296 182-475 (488)
62 1zpu_A Iron transport multicop 99.5 5.7E-12 2E-16 136.6 24.0 239 51-296 167-466 (534)
63 3pxl_A Laccase; 4-copper prote 99.5 7.6E-12 2.6E-16 134.1 23.9 240 50-295 165-455 (499)
64 1aoz_A Ascorbate oxidase; oxid 99.4 4.1E-12 1.4E-16 138.7 22.1 222 64-296 205-510 (552)
65 1iby_A Nitrosocyanin; RED copp 99.4 5.3E-13 1.8E-17 113.8 10.8 105 33-151 2-112 (112)
66 3aw5_A Multicopper oxidase; be 99.4 2.6E-12 8.8E-17 136.4 17.8 213 49-296 167-434 (448)
67 2q9o_A Laccase-1; multicopper 99.4 1.9E-11 6.6E-16 133.3 25.1 241 51-296 195-506 (559)
68 2g23_A PHS, phenoxazinone synt 99.4 1.1E-11 3.9E-16 135.3 21.8 232 50-297 253-577 (612)
69 2cal_A Rusticyanin; iron respi 99.4 9.4E-13 3.2E-17 118.5 9.9 99 47-150 46-154 (154)
70 3abg_A Bilirubin oxidase; clea 99.3 2.4E-11 8.3E-16 131.5 17.1 226 51-296 201-460 (534)
71 2wsd_A Spore coat protein A; o 99.3 1.1E-11 3.6E-16 134.1 13.0 217 50-296 229-495 (513)
72 1fwx_A Nitrous oxide reductase 99.3 4.4E-12 1.5E-16 136.5 9.3 96 47-153 497-594 (595)
73 2ov0_A Amicyanin; beta-sandwic 99.2 5.6E-11 1.9E-15 99.9 10.3 79 57-150 27-105 (105)
74 3sqr_A Laccase; multicopper ox 99.1 4.6E-09 1.6E-13 114.0 23.8 238 51-295 225-528 (580)
75 2aan_A Auracyanin A; cupredoxi 99.1 6E-11 2E-15 105.2 6.8 94 457-561 36-139 (139)
76 3cvb_A Plastocyanin; cupredoxi 99.1 2.1E-10 7.1E-15 96.4 7.8 84 457-561 20-104 (105)
77 2gim_A Plastocyanin; beta shee 99.0 1E-09 3.4E-14 92.3 8.7 84 62-151 19-106 (106)
78 3gyr_A PHS, phenoxazinone synt 99.0 1.8E-08 6.2E-13 111.6 20.6 233 50-297 253-577 (612)
79 2aan_A Auracyanin A; cupredoxi 98.9 7.4E-09 2.5E-13 91.6 10.2 91 59-150 31-139 (139)
80 2gim_A Plastocyanin; beta shee 98.8 1.1E-08 3.8E-13 85.9 7.8 84 457-561 21-105 (106)
81 4hci_A Cupredoxin 1; structura 98.8 2E-08 7E-13 83.3 8.3 80 56-150 21-100 (100)
82 1qhq_A Protein (auracyanin); e 98.7 5.2E-08 1.8E-12 86.2 8.2 98 457-561 34-139 (140)
83 2plt_A Plastocyanin; electron 98.6 5.6E-08 1.9E-12 80.2 7.8 81 62-150 17-98 (98)
84 1qhq_A Protein (auracyanin); e 98.6 1.4E-07 4.8E-12 83.4 10.3 92 59-151 29-140 (140)
85 3c75_A Amicyanin; copper prote 98.6 1.1E-07 3.6E-12 83.1 9.0 79 57-150 54-132 (132)
86 1pcs_A Plastocyanin; electron 98.6 1.1E-07 3.9E-12 78.3 8.0 81 62-150 18-98 (98)
87 1bxv_A Plastocyanin; copper pr 98.6 1.7E-07 5.8E-12 76.1 8.1 76 60-150 16-91 (91)
88 1pcs_A Plastocyanin; electron 98.5 6.8E-08 2.3E-12 79.7 5.4 78 457-561 20-98 (98)
89 1b3i_A PETE protein, protein ( 98.5 2.9E-07 9.8E-12 75.7 8.4 77 63-150 19-97 (97)
90 2plt_A Plastocyanin; electron 98.5 2.4E-07 8.4E-12 76.3 7.8 80 457-561 19-98 (98)
91 1kdj_A Plastocyanin; electron 98.5 3.7E-07 1.3E-11 75.8 8.0 83 62-150 16-102 (102)
92 1bxv_A Plastocyanin; copper pr 98.5 4.3E-07 1.5E-11 73.6 7.9 72 457-561 20-91 (91)
93 3tu6_A Pseudoazurin (blue copp 98.4 3.7E-07 1.3E-11 78.7 7.6 77 62-153 22-98 (127)
94 1byp_A Protein (plastocyanin); 98.4 8.6E-07 2.9E-11 73.1 9.2 77 63-150 17-99 (99)
95 3erx_A Pseudoazurin; copper pr 98.4 6.6E-07 2.3E-11 76.7 8.7 75 63-152 21-95 (123)
96 1plc_A Plastocyanin; electron 98.4 1E-06 3.5E-11 72.7 9.2 78 62-150 16-99 (99)
97 1b3i_A PETE protein, protein ( 98.4 2E-07 6.8E-12 76.7 4.4 78 457-561 20-97 (97)
98 3ef4_A Pseudoazurin, blue copp 98.4 8.1E-07 2.8E-11 76.0 7.8 75 63-152 22-96 (124)
99 1iby_A Nitrosocyanin; RED copp 98.3 1.9E-06 6.6E-11 72.8 8.9 74 457-562 39-112 (112)
100 1byp_A Protein (plastocyanin); 98.3 1.5E-06 5.3E-11 71.6 8.0 82 457-561 18-99 (99)
101 1id2_A Amicyanin; beta barrel, 98.3 3.6E-06 1.2E-10 70.3 10.1 79 57-150 28-106 (106)
102 4hci_A Cupredoxin 1; structura 98.3 2.5E-06 8.7E-11 70.5 8.6 72 457-561 29-100 (100)
103 1cuo_A Protein (azurin ISO-2); 98.2 3.1E-06 1.1E-10 73.1 7.9 92 59-151 14-129 (129)
104 1kdj_A Plastocyanin; electron 98.2 3E-06 1E-10 70.3 6.7 84 457-561 18-102 (102)
105 1paz_A Pseudoazurin precursor; 98.1 6.9E-06 2.3E-10 70.4 8.8 76 62-152 20-95 (123)
106 1iuz_A Plastocyanin; electron 98.1 8.4E-06 2.9E-10 67.0 9.1 80 60-150 15-98 (98)
107 3ay2_A Lipid modified azurin p 98.1 7.9E-06 2.7E-10 73.5 9.5 92 59-151 54-167 (167)
108 1pmy_A Pseudoazurin; electron 98.1 7.4E-06 2.5E-10 70.2 7.9 76 62-152 20-95 (123)
109 2ux6_A Pseudoazurin; type-1 co 98.0 2.1E-05 7.3E-10 67.2 9.6 74 62-152 20-93 (122)
110 3sbq_A Nitrous-oxide reductase 98.0 2.6E-05 8.7E-10 82.4 11.8 91 51-152 546-638 (638)
111 1plc_A Plastocyanin; electron 98.0 7.9E-06 2.7E-10 67.3 6.4 82 457-561 18-99 (99)
112 2ccw_A Azurin II, AZN-2; elect 98.0 3.2E-05 1.1E-09 66.7 9.9 91 59-151 14-129 (129)
113 2iaa_C Azurin; quinoprotein, t 98.0 3.8E-05 1.3E-09 66.1 10.0 91 59-151 13-128 (128)
114 1nwp_A Azurin; electron transp 97.9 4.8E-05 1.6E-09 65.5 9.8 91 59-150 14-128 (128)
115 2cal_A Rusticyanin; iron respi 97.9 2.5E-05 8.7E-10 69.7 7.8 89 456-561 61-154 (154)
116 1fwx_A Nitrous oxide reductase 97.9 3.9E-05 1.3E-09 82.7 10.4 79 455-563 512-593 (595)
117 2ov0_A Amicyanin; beta-sandwic 97.8 7.5E-05 2.6E-09 62.1 8.2 72 457-561 34-105 (105)
118 3ef4_A Pseudoazurin, blue copp 97.3 0.00049 1.7E-08 58.7 7.5 74 457-563 23-96 (124)
119 3tu6_A Pseudoazurin (blue copp 97.3 0.00044 1.5E-08 59.3 6.8 75 457-564 24-98 (127)
120 3erx_A Pseudoazurin; copper pr 97.3 0.00076 2.6E-08 57.5 7.8 74 457-563 22-95 (123)
121 3fsa_A Azurin; copper, cupredo 97.1 0.0026 9E-08 53.8 9.9 88 59-150 14-125 (125)
122 1iuz_A Plastocyanin; electron 97.0 0.0021 7E-08 52.4 7.9 80 457-561 19-98 (98)
123 1id2_A Amicyanin; beta barrel, 96.9 0.003 1E-07 52.3 8.2 72 457-561 35-106 (106)
124 3c75_A Amicyanin; copper prote 96.7 0.0048 1.6E-07 53.3 8.4 72 457-561 61-132 (132)
125 2cua_A Protein (CUA); CUA cent 96.7 0.0072 2.5E-07 52.3 9.0 74 63-151 60-135 (135)
126 1paz_A Pseudoazurin precursor; 96.6 0.0072 2.4E-07 51.4 8.4 37 523-563 59-95 (123)
127 3s8f_B Cytochrome C oxidase su 96.4 0.013 4.5E-07 52.5 9.1 79 58-151 88-168 (168)
128 1pmy_A Pseudoazurin; electron 96.4 0.008 2.7E-07 51.1 7.2 38 522-563 58-95 (123)
129 3sbq_A Nitrous-oxide reductase 96.2 0.016 5.4E-07 61.4 9.9 79 456-562 558-637 (638)
130 2ux6_A Pseudoazurin; type-1 co 95.5 0.031 1.1E-06 47.4 7.2 72 457-563 22-93 (122)
131 2cua_A Protein (CUA); CUA cent 95.5 0.051 1.8E-06 46.9 8.5 70 458-561 62-134 (135)
132 3ay2_A Lipid modified azurin p 95.2 0.052 1.8E-06 48.5 7.8 44 517-561 121-166 (167)
133 1cuo_A Protein (azurin ISO-2); 94.9 0.037 1.3E-06 47.4 5.7 90 457-561 19-128 (129)
134 2ccw_A Azurin II, AZN-2; elect 93.7 0.39 1.3E-05 40.9 9.7 43 518-561 83-128 (129)
135 2iaa_C Azurin; quinoprotein, t 93.5 0.25 8.4E-06 42.1 7.9 44 517-561 81-127 (128)
136 3s8f_B Cytochrome C oxidase su 93.0 0.37 1.3E-05 43.0 8.7 72 458-561 95-167 (168)
137 1nwp_A Azurin; electron transp 92.4 0.59 2E-05 39.7 8.8 44 517-561 82-128 (128)
138 3fsa_A Azurin; copper, cupredo 90.8 1.1 3.8E-05 37.7 8.5 96 457-561 19-125 (125)
139 3isy_A Bsupi, intracellular pr 88.6 3.4 0.00012 34.4 9.8 73 222-295 16-101 (120)
140 3isy_A Bsupi, intracellular pr 79.4 22 0.00076 29.4 10.8 72 56-138 27-103 (120)
141 1cyx_A CYOA; electron transpor 64.0 29 0.00098 31.7 8.7 62 217-299 42-103 (205)
142 2r39_A FIXG-related protein; s 52.2 37 0.0013 27.8 6.8 47 224-280 33-81 (118)
143 2gsm_B Cytochrome C oxidase su 45.5 45 0.0015 31.7 7.1 63 216-299 171-233 (262)
144 3hb3_B Cytochrome C oxidase su 44.5 56 0.0019 31.7 7.7 76 456-563 189-265 (298)
145 1cyx_A CYOA; electron transpor 44.2 52 0.0018 29.9 6.9 74 456-561 41-115 (205)
146 3hb3_B Cytochrome C oxidase su 43.5 79 0.0027 30.6 8.6 63 216-299 189-251 (298)
147 2f1e_A Protein APAG; APAG prot 41.3 19 0.00064 30.2 3.3 48 74-122 34-87 (127)
148 1nep_A EPV20, BNPC2, epididyma 41.0 33 0.0011 28.7 4.8 70 54-124 18-95 (130)
149 1xwv_A DER F II; beta sheets, 40.8 43 0.0015 27.9 5.6 70 54-124 16-93 (129)
150 2xzz_A Protein-glutamine gamma 39.1 28 0.00094 27.9 3.8 52 72-129 23-78 (102)
151 1xvs_A Protein APAG; MCSG APC2 39.0 18 0.00063 30.2 2.8 44 74-120 33-84 (126)
152 2gsm_B Cytochrome C oxidase su 38.2 76 0.0026 30.1 7.4 75 456-562 171-246 (262)
153 2x3c_A Toxic extracellular end 36.5 70 0.0024 31.7 7.1 16 109-124 95-110 (343)
154 2p9r_A Alpha-2-M, alpha-2-macr 34.3 1.4E+02 0.0048 23.2 7.5 70 220-295 13-84 (102)
155 1xq4_A Protein APAG; all beta 33.5 27 0.00091 29.8 3.0 44 74-120 38-89 (139)
156 2c34_A ICP, inhibitor of cyste 31.3 1.8E+02 0.006 23.6 7.7 67 62-129 14-88 (116)
157 1tza_A APAG protein, SOR45; st 31.2 24 0.00081 29.9 2.3 44 74-120 33-84 (134)
158 2h7w_A Chagasin; beta-strands, 31.0 2.1E+02 0.0073 23.8 8.3 64 62-129 32-103 (131)
159 1v54_B Cytochrome C oxidase po 28.8 90 0.0031 28.9 6.1 63 216-299 140-202 (227)
160 3rfr_A PMOB; membrane, oxidore 27.7 1E+02 0.0034 30.9 6.3 53 100-152 101-158 (419)
161 4ubp_B Protein (urease (chain 27.6 77 0.0026 26.1 4.6 67 56-122 4-88 (126)
162 4ac7_B Urease subunit beta; hy 27.6 77 0.0026 26.1 4.6 67 56-122 4-88 (126)
163 2cio_B Inhibitor of cysteine p 25.7 2.4E+02 0.0083 23.0 7.6 21 62-82 12-32 (121)
164 1x9u_A Umecyanin; cupredoxin, 25.3 69 0.0024 26.2 4.1 33 531-563 73-106 (116)
165 1fft_B Ubiquinol oxidase; elec 25.3 67 0.0023 31.4 4.7 63 216-299 151-213 (315)
166 1v54_B Cytochrome C oxidase po 24.5 1.5E+02 0.0051 27.4 6.7 76 455-562 139-215 (227)
167 2wtp_A ORF131 protein, CZCE; m 24.5 25 0.00085 29.5 1.2 23 217-239 72-94 (131)
168 2hj1_A Hypothetical protein; s 24.0 24 0.00081 28.0 0.9 24 52-75 59-82 (97)
169 2x3c_A Toxic extracellular end 23.7 2.6E+02 0.0088 27.6 8.7 71 224-295 38-127 (343)
170 3rfr_A PMOB; membrane, oxidore 22.9 1.5E+02 0.0051 29.7 6.5 58 58-123 293-366 (419)
171 1jer_A Cucumber stellacyanin; 22.3 1.1E+02 0.0039 25.8 5.0 33 532-564 77-110 (138)
172 3idu_A Uncharacterized protein 22.3 3.3E+02 0.011 22.4 9.7 67 219-295 28-96 (127)
173 3kmh_A D-lyxose isomerase; cup 21.0 1.7E+02 0.0058 27.1 6.1 13 264-276 172-184 (246)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=1.3e-100 Score=838.97 Aligned_cols=512 Identities=31% Similarity=0.572 Sum_probs=405.2
Q ss_pred ceeEEEEEEEEEEeeecCCceeEEEEECCCCCCcEEEEecCCEEEEEEEecCC-CCceEEecCCccCCCCCCCCCCCccc
Q 047497 30 GVTRHYKFDIKLQNVTRLCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQ-NNISIHWHGIRQLRSGWADGPAYITQ 108 (580)
Q Consensus 30 ~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~tq 108 (580)
+++++|+|+|++..+++||..+.+|+|||++|||+||+++||+|+|+|+|+|+ ++|+|||||+++.+++|+||+|++||
T Consensus 1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq 80 (552)
T 1aoz_A 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (552)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence 46899999999999999999999999999999999999999999999999998 99999999999999999999999999
Q ss_pred cccCCCCeEEEEEEECCCccceeEeeCccccc-ccceeeEEEeCCCCCCCCCCCCCCceeeeeeccccCChHHHHHHhhh
Q 047497 109 CPIQTGQSYVYNFTIVGQRGTLWWHAHLSWLR-STLYGPIIILPKRGIPYPFTKPYKEVPIIFGEWFKADPETIISQALQ 187 (580)
Q Consensus 109 ~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~~~~~~~~~~ 187 (580)
|+|+||++|+|+|++ +++||||||||...|. +||+|+|||++++....++ ..|+|++|+|+||++.+...++.....
T Consensus 81 ~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 158 (552)
T 1aoz_A 81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSS 158 (552)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTS
T ss_pred CCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhc
Confidence 999999999999998 8999999999998887 8999999999986544444 247899999999999987766543322
Q ss_pred cC-CCCCCCCeEEEcCCCCCCCCCC-------------CC-----ceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCcee
Q 047497 188 TG-GGPNVSDAYTINGLPGPLYNCS-------------AK-----DTFKLKVKPGKTYLLRLINAALNDELFFSIANHTL 248 (580)
Q Consensus 188 ~~-~~~~~~~~~liNG~~~~~~~~~-------------~~-----~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~ 248 (580)
.. .....++.++|||+.. ++|+ .. ..+.++|++|++|||||||+|+.+.+.|+|+||+|
T Consensus 159 ~~~~~~~~~~~~liNG~~~--~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~ 236 (552)
T 1aoz_A 159 KPIRWIGEPQTILLNGRGQ--FDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQL 236 (552)
T ss_dssp SSCCCCCSCSEEEETTBCC--SSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCE
T ss_pred ccccCCCCCCeEEECCccc--cCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEE
Confidence 11 1112468999999984 3332 21 12389999999999999999999999999999999
Q ss_pred eEEecCCCcCCceEEeEEEeCCCceEEEEEEcC-CCCCCceEEEEeccccCCCCCCCCcceEEEEEEecCCCCcccCCCC
Q 047497 249 TVVEADAIYVKPFETETLLIAPGQTTNVLLKTK-PHYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPLNFHLSSNSI 327 (580)
Q Consensus 249 ~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~-~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~ 327 (580)
+|||+||.+++|+.+++|.|+|||||||+|+++ +++ |+|+|++.... +. .......|+|+|++... ..
T Consensus 237 ~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~--g~y~i~~~~~~-~~--~~~~~~~ail~y~~~~~------~~ 305 (552)
T 1aoz_A 237 LVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPS--ENYWVSVGTRA-RH--PNTPPGLTLLNYLPNSV------SK 305 (552)
T ss_dssp EEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTT--CCEEEEEEEES-SC--CCSCCEEEEEEETTSCT------TS
T ss_pred EEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCC--CCEEEEEEccc-CC--CCCccEEEEEEECCCCC------CC
Confidence 999999999999999999999999999999994 444 89999998653 21 13457889999987652 00
Q ss_pred CCCCCcCCCCCCCCCcccccccccccccccCCCCCCCCCCCccceEEEEeccCcccCCCCCcccCCCCCeeeeeecceee
Q 047497 328 KNLPLFKPVLPALNDTSFATSFTNKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQASVNNISF 407 (580)
Q Consensus 328 ~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~ 407 (580)
...... |..+.+.+......+ .++.+..+. +...|..+++++.+.+..... + ..+.|++||++|
T Consensus 306 ~p~~~~-p~~p~~~~~~~~~~~--~l~~l~~~~-~~~~~~~~~~~~~l~~~~~~~-----------~-~~~~w~iNg~s~ 369 (552)
T 1aoz_A 306 LPTSPP-PQTPAWDDFDRSKNF--TYRITAAMG-SPKPPVKFNRRIFLLNTQNVI-----------N-GYVKWAINDVSL 369 (552)
T ss_dssp CCSSCC-CCCCCTTCHHHHHHH--HTTCCBCTT-CCCCCSSCSEEEEEEEEEEEE-----------T-TEEEEEETTEEE
T ss_pred CCCCCC-CCCCccccccccccc--cccccccCC-CCCCCCCCcEEEEEEEeeccC-----------C-CeEEEEECCCcc
Confidence 101111 333433333221111 233333222 334556678888777654321 1 246799999999
Q ss_pred ecCchhhhhhhhcCCccCccCCCCCCCCCe-ecccCCCCCCCccccCCceEEEecCCCEEEEEEecCCCCC---CCCCCc
Q 047497 408 VMPTTALLQAHFTGKSYGVYNPDFPTSPLI-AFNYTGTPPNNTMVSNGTKLVVLPFNSSVELIMQDTSILG---AESHPL 483 (580)
Q Consensus 408 ~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vi~n~~~~~---~~~HP~ 483 (580)
..|..|+|.+.+.+++ |.|..+++..++. .|+.+. ...+...+.++.++.++.|++|+|+|+|.+... .+.|||
T Consensus 370 ~~p~~P~L~~~~~~~~-g~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~ 447 (552)
T 1aoz_A 370 ALPPTPYLGAMKYNLL-HAFDQNPPPEVFPEDYDIDT-PPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPW 447 (552)
T ss_dssp CCCSSCHHHHHHTTCT-TSSCCSCCCSCCCTTCCTTS-CCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEE
T ss_pred CCCCCCHHHHHhhcCc-cccccCCCcccccccccccc-ccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCE
Confidence 9999999888777665 6676666543321 133321 111223455678899999999999999976422 467999
Q ss_pred cccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEecCceeEEEEeechhhhhccceEEEEEecC
Q 047497 484 HLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVLDG 563 (580)
Q Consensus 484 HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~~~ 563 (580)
|||||+||||++|.|.|++ .....+|+.+|+|||||.|++++|++|||++||||.|+|||||+||++.|||++|.|.+
T Consensus 448 HLHGh~F~Vl~~g~G~~~~-~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~- 525 (552)
T 1aoz_A 448 HLHGHDFWVLGYGDGKFSA-EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGV- 525 (552)
T ss_dssp EETTCCEEEEEEEESSCCG-GGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECG-
T ss_pred EEcCCceEEEecccCccCc-ccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCc-
Confidence 9999999999999899987 34567889999999999999999999999999999999999999999999999998754
Q ss_pred CCCCCCCCCCCCCCCCC
Q 047497 564 KHPNQKLPPPPADLPQC 580 (580)
Q Consensus 564 ~~~~~~~~~~p~~~~~c 580 (580)
++++++|.+++.|
T Consensus 526 ----~~~~~~P~~~~~C 538 (552)
T 1aoz_A 526 ----EKVGRIPTKALAC 538 (552)
T ss_dssp ----GGCCCCCHHHHSS
T ss_pred ----hhhccCCcchhhh
Confidence 2566788899999
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=1.2e-97 Score=808.49 Aligned_cols=464 Identities=32% Similarity=0.540 Sum_probs=372.6
Q ss_pred cceeEEEEEEEEEEeeecCCceeEEEEECCCCCCcEEEEecCCEEEEEEEecCC-CCceEEecCCccCCCCCCCCCCCcc
Q 047497 29 LGVTRHYKFDIKLQNVTRLCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQ-NNISIHWHGIRQLRSGWADGPAYIT 107 (580)
Q Consensus 29 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~t 107 (580)
.+++++|+|+|++..+++||..+.+|+|||++|||+||+++||+|+|+|+|+|+ ++|+|||||+++.+++|+||+|++|
T Consensus 64 ~~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vT 143 (580)
T 3sqr_A 64 TGVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVT 143 (580)
T ss_dssp CCCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTT
T ss_pred CceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccc
Confidence 367899999999999999999999999999999999999999999999999998 8999999999999999999999999
Q ss_pred ccccCCCCeEEEEEEECCCccceeEeeCccccc-ccceeeEEEeCCCCCCCCCCCCCCce-eeeeeccccCChHHHHHHh
Q 047497 108 QCPIQTGQSYVYNFTIVGQRGTLWWHAHLSWLR-STLYGPIIILPKRGIPYPFTKPYKEV-PIIFGEWFKADPETIISQA 185 (580)
Q Consensus 108 q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~d~e~-~l~~~d~~~~~~~~~~~~~ 185 (580)
||+|+||++|+|+|++ .++||||||||...|+ +||+|+|||+++.+. .+|.|. +|+|+||++....+++...
T Consensus 144 q~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~~-----~yD~d~~~l~l~Dw~~~~~~~~~~~~ 217 (580)
T 3sqr_A 144 QCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPATA-----DYDEDVGVIFLQDWAHESVFEIWDTA 217 (580)
T ss_dssp BCCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHHHHHHHH
T ss_pred cCCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCcccC-----CCCccceEEEEEEEecCCHHHHHHHH
Confidence 9999999999999998 7999999999998888 799999999988653 247887 9999999999988776655
Q ss_pred hhcCCCCCCCCeEEEcCCCCCCCCCCC---------CceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEecCCC
Q 047497 186 LQTGGGPNVSDAYTINGLPGPLYNCSA---------KDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAI 256 (580)
Q Consensus 186 ~~~~~~~~~~~~~liNG~~~~~~~~~~---------~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~ 256 (580)
... .+..++.++|||+.. ++|+. ...+.++|++|++|||||||+|....+.|+|+||+|+|||+||.
T Consensus 218 ~~~--~~~~~d~~liNG~~~--~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~ 293 (580)
T 3sqr_A 218 RLG--APPALENTLMNGTNT--FDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLV 293 (580)
T ss_dssp TTS--CCCCBSEEEETTBCC--CCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTE
T ss_pred hcc--CCCCCceEEECCccc--CCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCc
Confidence 432 245679999999964 44542 24689999999999999999999999999999999999999999
Q ss_pred cCCceEEeEEEeCCCceEEEEEEcCCCCCCceEEEEeccccCCCCCCCCcceEEEEEEecCCCCcccCCCCCCCCCcCCC
Q 047497 257 YVKPFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPV 336 (580)
Q Consensus 257 ~v~P~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~ 336 (580)
+++|+.+++|.|+|||||||+|+++++. |+|||++.+..+|...+......|+|+|.++.. . . |.
T Consensus 294 ~v~P~~~~~l~i~pGqRydVlv~a~~~~--g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~--------~-~----P~ 358 (580)
T 3sqr_A 294 PIVPYTTDTLLIGIGQRYDVIVEANAAA--DNYWIRGNWGTTCSTNNEAANATGILRYDSSSI--------A-N----PT 358 (580)
T ss_dssp EEEEEEESSEEECTTCEEEEEEECCSCS--SEEEEECCCCTTTSCBTTGGGCEEEEESSTTCC--------C-C----CC
T ss_pred cCCceEeeEEEEccceEEEEEEEeCCCC--CeEEEEEecccccCccCCCCceEEEEEECCCCC--------C-C----CC
Confidence 9999999999999999999999999876 999999987655532233346899999987542 1 1 11
Q ss_pred CCCCCCc-ccccccccccccccCCCCCCCCCCCccceEEEEeccCcccCCCCCcccCCCCCeeeeeecceeeec-Cchhh
Q 047497 337 LPALNDT-SFATSFTNKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQASVNNISFVM-PTTAL 414 (580)
Q Consensus 337 ~p~~~~~-~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~-p~~~~ 414 (580)
.+.+... .+.......|.++. +..+|...+..+.+.++ .+..+.|++||.+|.. +..|.
T Consensus 359 ~~~~~~~~~~~~~~~~~L~P~~----~~~~~~~~~~~~~l~~~---------------~~~~~~w~iN~~s~~~~~~~P~ 419 (580)
T 3sqr_A 359 SVGTTPRGTCEDEPVASLVPHL----ALDVGGYSLVDEQVSSA---------------FTNYFTWTINSSSLLLDWSSPT 419 (580)
T ss_dssp CCCCCCCCCSCCSCGGGCCBSS----CCBCCSEEEEEEEEEEE---------------ESSSEEEEETTBCCCCCTTSCH
T ss_pred CCCCCccchhhcccccccccCC----CCCCCCccceEEEEEec---------------cCCceeEEECCEecccCCCCCc
Confidence 1111111 01111011233221 22333333433333332 1245789999999975 46676
Q ss_pred hhhhhcCCccCccCCCCCCCCCeecccCCCCCCCccccCCceEEEe----cCCCEEEEEEecCCCCCCCCCCccccCCcE
Q 047497 415 LQAHFTGKSYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVL----PFNSSVELIMQDTSILGAESHPLHLHGFNF 490 (580)
Q Consensus 415 l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v----~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F 490 (580)
|.+.+.+ . .+|+. ...++.+ +.|++|||+|+|.+. ..+.||||||||+|
T Consensus 420 L~~~~~g----~--~~~~~--------------------~~~~~~~~~~~~~~~~VeiVi~n~~~-~~~~HP~HLHGh~F 472 (580)
T 3sqr_A 420 TLKIFNN----E--TIFPT--------------------EYNVVALEQTNANEEWVVYVIEDLTG-FGIWHPIHLHGHDF 472 (580)
T ss_dssp HHHHHTT----C--CCCCG--------------------GGCEEEECC----CCEEEEEEEECSS-SCCCEEEEESSCCE
T ss_pred hhhhhcC----C--ccCCC--------------------CcceeecccccCCCcEEEEEEeCCCc-cccceeeEecCceE
Confidence 6654432 1 23321 1234444 469999999999752 24799999999999
Q ss_pred EEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEecCceeEEEEeechhhhhccceEEEEEecC
Q 047497 491 FVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVLDG 563 (580)
Q Consensus 491 ~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~~~ 563 (580)
|||++|.|.|++...+..+|+.||++||||.|++++|++|||++||||.|+|||||+||++.||+++|.+.+.
T Consensus 473 ~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~~ 545 (580)
T 3sqr_A 473 FIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQS 545 (580)
T ss_dssp EEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEESGG
T ss_pred EEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEECHH
Confidence 9999999999987767789999999999999999999999999999999999999999999999999987543
No 3
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=3.2e-94 Score=773.28 Aligned_cols=456 Identities=30% Similarity=0.539 Sum_probs=357.3
Q ss_pred EEEEEEEEEEeeecCCceeEEEEECCCCCCcEEEEecCCEEEEEEEecCCC-----CceEEecCCccCCCCCCCCCCCcc
Q 047497 33 RHYKFDIKLQNVTRLCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQN-----NISIHWHGIRQLRSGWADGPAYIT 107 (580)
Q Consensus 33 ~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~-----~~~iH~HG~~~~~~~~~DGv~~~t 107 (580)
..|+|+|++..+++||..+.+|+|||++|||+||+++||+|+|+|+|+|++ +|+|||||++++.++|+||++++|
T Consensus 4 ~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 83 (499)
T 3pxl_A 4 PVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFIN 83 (499)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred ceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 579999999999999999999999999999999999999999999999985 799999999999999999999999
Q ss_pred ccccCCCCeEEEEEEECCCccceeEeeCccccc-ccceeeEEEeCCCCC-CCCCCCCCCceeeeeeccccCChHHHHHHh
Q 047497 108 QCPIQTGQSYVYNFTIVGQRGTLWWHAHLSWLR-STLYGPIIILPKRGI-PYPFTKPYKEVPIIFGEWFKADPETIISQA 185 (580)
Q Consensus 108 q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~-~~~~~~~d~e~~l~~~d~~~~~~~~~~~~~ 185 (580)
||+|+||++|+|+|++++++||||||||.+.|+ +||+|+|||+++.+. ..++...++|++|+++||++.....
T Consensus 84 q~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~----- 158 (499)
T 3pxl_A 84 QCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL----- 158 (499)
T ss_dssp BCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT-----
T ss_pred cCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc-----
Confidence 999999999999999878999999999999887 899999999987642 1122223467899999999876532
Q ss_pred hhcCCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEecCCCcCCceEEeE
Q 047497 186 LQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETET 265 (580)
Q Consensus 186 ~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~ 265 (580)
.+..+..+++++|||+.. +..+.....+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.+++
T Consensus 159 --~~~~p~~~d~~liNG~~~-~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~ 235 (499)
T 3pxl_A 159 --GPRFPGGADATLINGKGR-APSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDS 235 (499)
T ss_dssp --SCSSCSSCSEEEETTBCC-CTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESB
T ss_pred --ccCCCCCCcEEEECCCCc-CCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEeee
Confidence 233444679999999853 23333446689999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCceEEEEEEcCCCCCCceEEEEeccccCCCCCCCCcceEEEEEEecCCCCcccCCCCCCCCCcCCCCCCCCCccc
Q 047497 266 LLIAPGQTTNVLLKTKPHYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALNDTSF 345 (580)
Q Consensus 266 l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~ 345 (580)
|.|+|||||||+|+++++. |+|||++.+...+. .+.+....|+|+|+++.. . .+.. +..+...
T Consensus 236 l~i~pGqR~dvlv~~~~~~--g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~--------~-~p~~-~~~~~~~---- 298 (499)
T 3pxl_A 236 IQIFAAQRYSFVLDANQAV--DNYWIRANPNFGNV-GFDGGINSAILRYDGAPA--------V-EPTT-NQTTSVK---- 298 (499)
T ss_dssp EEECTTCEEEEEEECCSCS--SEEEEEEEESSSSC-SCGGGTTEEEEEETTSCS--------S-CCCC-CCCCCSS----
T ss_pred EEECCCcEEEEEEECCCCC--ceEEEEEecccCcc-ccCCCceEEEEEeCCCCC--------C-CCCC-CCCCCCc----
Confidence 9999999999999999876 99999998644332 222334579999987642 1 1111 0000000
Q ss_pred ccccccccccccCCCCCC-CCCCCccceEEEEeccCcccCCCCCcccCCCCCeeeeeecceeeecCchhhhhhhhcCCcc
Q 047497 346 ATSFTNKLRSLASTQFPA-NVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQASVNNISFVMPTTALLQAHFTGKSY 424 (580)
Q Consensus 346 ~~~~~~~l~~l~~~~~p~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~ 424 (580)
......|+++.....|. ..+..+|+++.+.+.+ ++. .|++||++|..|+.|+|.+.+.+
T Consensus 299 -~~~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~--------------~~~--~w~iNg~s~~~~~~P~L~~~~~g--- 358 (499)
T 3pxl_A 299 -PLNEVDLHPLVSTPVPGAPSSGGVDKAINMAFNF--------------NGS--NFFINGASFVPPTVPVLLQILSG--- 358 (499)
T ss_dssp -BCCGGGCCBSSCCCCSSCSSTTCSSEEEECCEEE--------------CSS--CEEETTBCCCCCSSCHHHHHHTT---
T ss_pred -ccccccccccccccCCCcccCCCCcEEEEEEEEe--------------cCc--EEEEcCEecCCCCCchhhhhhcC---
Confidence 00112344443322221 1234567766655432 112 58999999998888876654422
Q ss_pred CccCCCCCCCCCeecccCCCCCCCccccCCceEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCC
Q 047497 425 GVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNK 504 (580)
Q Consensus 425 g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~ 504 (580)
.+... + ......++.++.|++|||+|+|.+....+.||||||||+|+||+.+ |
T Consensus 359 -~~~~~--~-----------------~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~-g------ 411 (499)
T 3pxl_A 359 -AQTAQ--D-----------------LLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSA-G------ 411 (499)
T ss_dssp -CCSTT--T-----------------SSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECT-T------
T ss_pred -Ccccc--c-----------------cCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEecc-C------
Confidence 11100 0 1123568899999999999995322346899999999999999864 2
Q ss_pred CCCCCCCCCCCccceEeeCC---CcEEEEEEEecCceeEEEEeechhhhhccceEEEEEe
Q 047497 505 DPTKFNLVDPVERNTVGVPS---GGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVL 561 (580)
Q Consensus 505 ~~~~~~~~~p~~rDTv~vp~---g~~v~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~ 561 (580)
...+|+.+|++||||.|++ |+|++|||++||||.|+|||||+||++.||+++|.+.
T Consensus 412 -~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~ 470 (499)
T 3pxl_A 412 -STVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAED 470 (499)
T ss_dssp -CCCCCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEES
T ss_pred -CcccccCCCCccceEEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEEEEC
Confidence 2357889999999999997 9999999999999999999999999999999999654
No 4
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-94 Score=783.51 Aligned_cols=462 Identities=27% Similarity=0.429 Sum_probs=364.2
Q ss_pred eeEEEEEEEEEEeeecCC-ceeEEEEECCCCCCcEEEEecCCEEEEEEEecCC-CCceEEecCCccCCCCCCCCCCCccc
Q 047497 31 VTRHYKFDIKLQNVTRLC-NTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQ-NNISIHWHGIRQLRSGWADGPAYITQ 108 (580)
Q Consensus 31 ~~~~~~l~~~~~~~~~~g-~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~tq 108 (580)
++++|+|+|++..+++|| ..+.+|+|||++|||+||+++||+|+|+|+|+|+ ++|+|||||+++.+++|+||+|++||
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 478999999999999999 8999999999999999999999999999999998 99999999999999999999999999
Q ss_pred cccCCCCeEEEEEEECCCccceeEeeCccccc-ccceeeEEEeCCCCCCCCCCCCCCceeeeeeccccCChHHHHHHhhh
Q 047497 109 CPIQTGQSYVYNFTIVGQRGTLWWHAHLSWLR-STLYGPIIILPKRGIPYPFTKPYKEVPIIFGEWFKADPETIISQALQ 187 (580)
Q Consensus 109 ~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~~~~~~~~~~ 187 (580)
|+|+||++|+|+|++++++||||||||.+.|. +||+|+|||+++++ ++ .+|+|++|+|+||+++....+......
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~-p~---~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF-PY---DYDEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC-CS---CCSEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC-CC---CCcceEEEEeeccccCCHHHHHHHHhc
Confidence 99999999999999866999999999999988 89999999999864 22 458899999999999988877655432
Q ss_pred c---CCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEecCCCcCCceEEe
Q 047497 188 T---GGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETE 264 (580)
Q Consensus 188 ~---~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d 264 (580)
. .+....++.+||||+.. +.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.++
T Consensus 157 ~~~~~g~~~~~d~~liNG~~~----------~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~ 226 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNTMN----------LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTD 226 (534)
T ss_dssp TTCTTCCCCCCSEEEETTBSS----------CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEES
T ss_pred cccCCCCCCCCceEEECCCCc----------eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEec
Confidence 1 12334679999999864 7899999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCceEEEEEEcCCCCCCceEEEEeccccCCCC---CCCCcceEEEEEEecCCCCcccCCCCCCCCCcCCCCCC-C
Q 047497 265 TLLIAPGQTTNVLLKTKPHYPSATFFMKARPYVTGQG---TFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPA-L 340 (580)
Q Consensus 265 ~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~-~ 340 (580)
+|.|+|||||||+|++++.+ +++|+|++.....+.. ........++|+|+++.. . +.+... ..++. .
T Consensus 227 ~l~l~~gqR~dvlv~~~~~~-~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~------~-p~~~~~-~~~~~~~ 297 (534)
T 1zpu_A 227 MLYITVAQRYTVLVHTKNDT-DKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAA------L-PTQNYV-DSIDNFL 297 (534)
T ss_dssp CEEECTTCEEEEEEECCSCS-SCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSC------B-CCCCCC-SCSSCSC
T ss_pred eEEECccceEEEEEEcCCCC-CCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCC------C-CCCCcc-ccccccc
Confidence 99999999999999998643 2799999875433211 122356789999987542 0 111111 11111 1
Q ss_pred CCcccccccccccccccCCCCCCCCCCCccceEEEEeccCcccCCCCCcccCCCCCeeeeeecceeeecCchhhhhhhhc
Q 047497 341 NDTSFATSFTNKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQASVNNISFVMPTTALLQAHFT 420 (580)
Q Consensus 341 ~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~ 420 (580)
.+ ..++++.. ..++..+++++.+.+.+... .++ ...|++||++|..|..|.|...+.
T Consensus 298 ~~--------~~l~p~~~----~~~~~~~~~~~~l~~~~~~~----------~~~-~~~~~iNg~s~~~~~~P~L~~~~~ 354 (534)
T 1zpu_A 298 DD--------FYLQPYEK----EAIYGEPDHVITVDVVMDNL----------KNG-VNYAFFNNITYTAPKVPTLMTVLS 354 (534)
T ss_dssp CG--------GGCCBSSC----CCCCCSCSEEEEEEEEEEEC----------TTS-CEEEEETTBCCCCCSSCHHHHHTT
T ss_pred cc--------ccceeCCC----CCCCCCCCeEEEEEEEeecc----------CCc-eeEEEECCCcccCCCCCceeeecc
Confidence 00 11222211 12334567777776654321 022 235789999999998876655432
Q ss_pred CCccCccCCCCCCCCCeecccCCCCCCCccccCCceEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccC--
Q 047497 421 GKSYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFG-- 498 (580)
Q Consensus 421 ~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g-- 498 (580)
. |.+. .. +.. ...++.++.++.|++|+|+|+|.+ .+.||||||||+||||+++.+
T Consensus 355 ~---~~~~----~~-~~~------------~~~~~~~~~~~~g~~v~ivi~N~~---~~~HP~HLHGh~F~Vl~~~~~~~ 411 (534)
T 1zpu_A 355 S---GDQA----NN-SEI------------YGSNTHTFILEKDEIVEIVLNNQD---TGTHPFHLHGHAFQTIQRDRTYD 411 (534)
T ss_dssp S---GGGT----TC-GGG------------GCSSSCEEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEECCCCC
T ss_pred c---Cccc----CC-Ccc------------cCCCceEEEeCCCCEEEEEEeCCC---CCCCCeEecCCceEEEeecCCcc
Confidence 1 2211 11 111 122466789999999999999964 489999999999999999864
Q ss_pred --------cCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEecCceeEEEEeechhhhhccceEEEEEecC
Q 047497 499 --------NFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVLDG 563 (580)
Q Consensus 499 --------~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~~~ 563 (580)
.|++.. ... ...+|+|||||.|++++|++|||++||||.|+|||||+||++.|||++|.|.+.
T Consensus 412 ~~~~G~p~~~~~~~-~~~-~~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~ 482 (534)
T 1zpu_A 412 DALGEVPHSFDPDN-HPA-FPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDPF 482 (534)
T ss_dssp GGGTCCCCCCBTTB-CCC-CCSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHH
T ss_pred ccccCcccccCccc-ccc-ccCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECcc
Confidence 344321 112 246899999999999999999999999999999999999999999999988643
No 5
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=1.1e-94 Score=785.47 Aligned_cols=476 Identities=28% Similarity=0.485 Sum_probs=363.5
Q ss_pred ccceeEEEEEEEEEEeeecCCc-eeEEEEECCCCCCcEEEEecCCEEEEEEEecCC-----CCceEEecCCccCCCCCCC
Q 047497 28 ALGVTRHYKFDIKLQNVTRLCN-TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQ-----NNISIHWHGIRQLRSGWAD 101 (580)
Q Consensus 28 ~~~~~~~~~l~~~~~~~~~~g~-~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~-----~~~~iH~HG~~~~~~~~~D 101 (580)
..+...+|+|++++..+++||. .+.+|+|||++|||+||+++||+|+|+|+|+|+ ++|+|||||+++.+++|+|
T Consensus 19 ~~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~D 98 (521)
T 1v10_A 19 SLAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMD 98 (521)
T ss_dssp ---CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGS
T ss_pred hcccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccC
Confidence 4467788999999999999999 999999999999999999999999999999999 9999999999999989999
Q ss_pred CCCCccccccCCCCeEEEEEEECCCccceeEeeCccccc-ccceeeEEEeCCCCC-CCCCCCCCCceeeeeeccccCChH
Q 047497 102 GPAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLSWLR-STLYGPIIILPKRGI-PYPFTKPYKEVPIIFGEWFKADPE 179 (580)
Q Consensus 102 Gv~~~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~-~~~~~~~d~e~~l~~~d~~~~~~~ 179 (580)
|+|++|||+|+||++|+|+|++++++||||||||.+.|. +||+|+|||+++.+. +.++...++|++|+++||+++...
T Consensus 99 Gv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~~ 178 (521)
T 1v10_A 99 GPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLST 178 (521)
T ss_dssp CCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCCC
T ss_pred CCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCCHH
Confidence 999999999999999999999778999999999999887 799999999987532 122322346999999999998766
Q ss_pred HHHHHhhhcCCCCCCCCeEEEcCCCCCCCCCC--CCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEecCCCc
Q 047497 180 TIISQALQTGGGPNVSDAYTINGLPGPLYNCS--AKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIY 257 (580)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~--~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~ 257 (580)
.+... .+.....++.++|||+.. +.|. ....+.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.+
T Consensus 179 ~~~~~---~~~~~~~~d~~liNG~~~--~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~ 253 (521)
T 1v10_A 179 VLFPN---PNKAPPAPDTTLINGLGR--NSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVS 253 (521)
T ss_dssp ----------CCCSCCSEEEETTBCC--CSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEE
T ss_pred HHhhc---cCCCCCCCCEEEECCccc--CCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCcc
Confidence 54321 112234579999999974 4554 2345899999999999999999999999999999999999999999
Q ss_pred CCceEEeEEEeCCCceEEEEEEcCCCCCCceEEEEeccccCCCCCCCCcceEEEEEEecCCCCcccCCCCCCCCCcCCCC
Q 047497 258 VKPFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVL 337 (580)
Q Consensus 258 v~P~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~ 337 (580)
++|+.++++.|+|||||||+|++++++ |+|+|++.....+. .+......++|+|++... . .+..
T Consensus 254 ~~p~~~~~l~l~pgqR~dvlv~~~~~~--g~y~i~~~~~~~~~-~~~~~~~~ail~y~~~~~--------~-~p~~---- 317 (521)
T 1v10_A 254 HQPLTVDSLTIFAGQRYSVVVEANQAV--GNYWIRANPSNGRN-GFTGGINSAIFRYQGAAV--------A-EPTT---- 317 (521)
T ss_dssp EEEEEESBEEECTTCEEEEEEECCSCS--SEEEEEEEESSSSC-SCGGGTTEEEEEETTCCS--------C-CCCC----
T ss_pred ccceeeeeEEEcccceEEEEEEcCCCC--Cceeeeeccccccc-cCCCCceeEEEEECCCCC--------C-CCCC----
Confidence 999999999999999999999999876 99999998653322 122223469999987652 1 1111
Q ss_pred CCCCCcccccccccccccccCCCCCC-CCCCCccceEEEEeccCcccCCCCCcccCCCCCeeeeeecceeeecCchhhhh
Q 047497 338 PALNDTSFATSFTNKLRSLASTQFPA-NVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQASVNNISFVMPTTALLQ 416 (580)
Q Consensus 338 p~~~~~~~~~~~~~~l~~l~~~~~p~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~ 416 (580)
+.. +.... ....|.++...+.|. ..+...+.++.++..+ ++..+.|++||++|..+..|.|.
T Consensus 318 ~~~-~~~~~--~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~--------------~~~~~~~~iNg~~~~~~~~P~l~ 380 (521)
T 1v10_A 318 SQN-SGTAL--NEANLIPLINPGAPGNPVPGGADINLNLRIGR--------------NATTADFTINGAPFIPPTVPVLL 380 (521)
T ss_dssp CCC-CSCBC--CGGGCCBSSCCCCSSCSSTTCSSEEEECCEEC--------------CSSSSCCEESSCCCCCCSSCHHH
T ss_pred CCC-ccccc--chhhcccCCcccCCCcccCCcceEEEEEEEec--------------CCceeEEEECCCcccCCCCchhh
Confidence 000 00000 011333332222221 1122334444332211 22224689999999988777665
Q ss_pred hhhcCCccCccC-CCCCCCCCeecccCCCCCCCccccCCceEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEe
Q 047497 417 AHFTGKSYGVYN-PDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQ 495 (580)
Q Consensus 417 ~~~~~~~~g~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~ 495 (580)
+.+.+ .+. .+ ...++.++.++.|++|||+++| . +.||||||||+||||++
T Consensus 381 ~~~~g----~~~~~~--------------------~~~~~~~~~v~~g~~vei~l~N-~----~~HP~HLHGh~F~Vl~~ 431 (521)
T 1v10_A 381 QILSG----VTNPND--------------------LLPGGAVISLPANQVIEISIPG-G----GNHPFHLHGHNFDVVRT 431 (521)
T ss_dssp HHHHT----CCCGGG--------------------SSSTTTEEEECTTCEEEEEEEC-C----BSCEEEESSCCEEEEEC
T ss_pred hhhcC----Cccccc--------------------CCCCceEEEecCCCEEEEEEcC-C----CCCCEEEccceEEEEec
Confidence 54422 110 01 1234668899999999999998 3 79999999999999999
Q ss_pred ccCcCCCCCCCCCCCCCCCCccceEee-CCCcEEEEEEEecCceeEEEEeechhhhhccceEEEEEecCCCCCCCCCCCC
Q 047497 496 GFGNFDPNKDPTKFNLVDPVERNTVGV-PSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVLDGKHPNQKLPPPP 574 (580)
Q Consensus 496 g~g~~~~~~~~~~~~~~~p~~rDTv~v-p~g~~v~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~~~~~~~~~~~~~p 574 (580)
+.+. .+++.+|.|||||.| ++++|++|||++||||.|+|||||+||++.|||++|.|.+.+ ..++.++|
T Consensus 432 ~~~~--------~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~--~~~~~~~p 501 (521)
T 1v10_A 432 PGSS--------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPN--IPIANAIS 501 (521)
T ss_dssp TTCS--------CCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGG--HHHHSCCC
T ss_pred CCCC--------ccccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcc--hhhccCCC
Confidence 7442 367789999999999 899999999999999999999999999999999999986543 33444444
Q ss_pred -CCCCCC
Q 047497 575 -ADLPQC 580 (580)
Q Consensus 575 -~~~~~c 580 (580)
.+.+.|
T Consensus 502 ~~~~~~C 508 (521)
T 1v10_A 502 PAWDDLC 508 (521)
T ss_dssp HHHHTHH
T ss_pred hHHhhhc
Confidence 456776
No 6
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=6.5e-94 Score=770.98 Aligned_cols=456 Identities=28% Similarity=0.524 Sum_probs=356.0
Q ss_pred EEEEEEEEEEeeecCCceeEEEEECCCCCCcEEEEecCCEEEEEEEecCCC-----CceEEecCCccCCCCCCCCCCCcc
Q 047497 33 RHYKFDIKLQNVTRLCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQN-----NISIHWHGIRQLRSGWADGPAYIT 107 (580)
Q Consensus 33 ~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~-----~~~iH~HG~~~~~~~~~DGv~~~t 107 (580)
..|+|+|++..+++||..+.+|+|||++|||+||+++||+|+|+|+|+|++ +|+|||||++++.++|+||++++|
T Consensus 5 ~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 84 (495)
T 3t6v_A 5 PVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFIT 84 (495)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 579999999999999999999999999999999999999999999999985 799999999999999999999999
Q ss_pred ccccCCCCeEEEEEEECCCccceeEeeCccccc-ccceeeEEEeCCCCCC-CCCCCCCCceeeeeeccccCChHHHHHHh
Q 047497 108 QCPIQTGQSYVYNFTIVGQRGTLWWHAHLSWLR-STLYGPIIILPKRGIP-YPFTKPYKEVPIIFGEWFKADPETIISQA 185 (580)
Q Consensus 108 q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~-~~~~~~d~e~~l~~~d~~~~~~~~~~~~~ 185 (580)
||+|+||++|+|+|++++++||||||||.+.|+ +||+|+|||+++.+.. .++...++|++|+++||+++....+
T Consensus 85 q~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~---- 160 (495)
T 3t6v_A 85 QCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM---- 160 (495)
T ss_dssp BCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS----
T ss_pred cCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh----
Confidence 999999999999999878999999999999887 8999999999876421 1222235678999999999876431
Q ss_pred hhcCCCCCCCCeEEEcCCCCCCCCCC--CCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEecCCCcCCceEE
Q 047497 186 LQTGGGPNVSDAYTINGLPGPLYNCS--AKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFET 263 (580)
Q Consensus 186 ~~~~~~~~~~~~~liNG~~~~~~~~~--~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~ 263 (580)
.+..+..+++++|||+.. +.|. ....+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.+
T Consensus 161 --~~~~p~~~d~~liNG~g~--~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~~ 236 (495)
T 3t6v_A 161 --GAGGAITADSTLIDGLGR--THVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTV 236 (495)
T ss_dssp --CSSSCCCCSEEEETTBCC--BSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEE
T ss_pred --ccCCCCCCcEEEECCcCc--CCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEEe
Confidence 223445789999999953 3333 2356899999999999999999999999999999999999999999999999
Q ss_pred eEEEeCCCceEEEEEEcCCCCCCceEEEEeccccCCCCCCCCcceEEEEEEecCCCCcccCCCCCCCCCcCCCCCCCCCc
Q 047497 264 ETLLIAPGQTTNVLLKTKPHYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALNDT 343 (580)
Q Consensus 264 d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~ 343 (580)
++|.|+|||||||+|+++++. |+|||++.+...+. .+.+....|+|+|+++.. . .+.. +..+ . ..
T Consensus 237 ~~l~i~pGqR~dvlv~~~~~~--g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~--------~-~p~~-~~~~-~-~~ 301 (495)
T 3t6v_A 237 DEIQIFAAQRYSFVLNANQPV--GNYWIRANPNSGGE-GFDGGINSAILRYDGATT--------A-DPVT-VAST-V-HT 301 (495)
T ss_dssp SBEEECTTCEEEEEEECCSCS--SEEEEEEEESSSSC-SCGGGTTEEEEEETTSCS--------S-CCCC-CCCS-S-CS
T ss_pred eeEEEcCceEEEEEEECCCCC--ceEEEEEecccCcc-ccCCCceEEEEEECCCCC--------C-CCCC-CCCC-C-Cc
Confidence 999999999999999999876 99999998643332 222334579999987542 1 1110 0000 0 00
Q ss_pred ccccccccccccccCCCCCC-CCCCCccceEEEEeccCcccCCCCCcccCCCCCeeeeeecceeeecCchhhhhhhhcCC
Q 047497 344 SFATSFTNKLRSLASTQFPA-NVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQASVNNISFVMPTTALLQAHFTGK 422 (580)
Q Consensus 344 ~~~~~~~~~l~~l~~~~~p~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~ 422 (580)
. ......|+++.....|. ..+..+++++.+.+.+ ++. .|++||++|..|+.|+|.+...
T Consensus 302 ~--~~~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~--------------~~~--~w~iNg~s~~~~~~P~L~~~~~-- 361 (495)
T 3t6v_A 302 K--CLIETDLHPLSRNGVPGNPHQGGADCNLNLSLGF--------------ACG--NFVINGVSFTPPTVPVLLQICS-- 361 (495)
T ss_dssp S--BCCGGGCCBSSCCCCSSCSSTTCSSEEEECCEEE--------------ETT--EEEETTBCCCCCSSCHHHHHHT--
T ss_pred c--ccccccccccccccCCCccCCCCCcEEEEEEEEe--------------cCc--EEEEcCEecCCCCCcchhhhhc--
Confidence 0 00112344443222221 1234466666554432 112 5899999999888876655432
Q ss_pred ccCccCCCCCCCCCeecccCCCCCCCccccCCceEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCC
Q 047497 423 SYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDP 502 (580)
Q Consensus 423 ~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~ 502 (580)
|.+... + ......++.++.|++|||+|+|. ...+.||||||||+|+||+.+ |
T Consensus 362 --g~~~~~--~-----------------~~~~~~v~~~~~g~~V~ivl~~n--~~~~~HP~HLHGh~F~vl~~~-g---- 413 (495)
T 3t6v_A 362 --GANTAA--D-----------------LLPSGSVISLPSNSTIEIALPAG--AAGGPHPFHLHGHDFAVSESA-S---- 413 (495)
T ss_dssp --TCCSST--T-----------------SSSTTSEEEECTTCEEEEEEECC--SSSCCCEEEETTCCEEEEECT-T----
T ss_pred --CCcCcc--c-----------------ccCCcceEEecCCCEEEEEEccC--CCCCCcceeecCCcEEEEecC-C----
Confidence 211100 0 11235688999999999999842 235899999999999999864 2
Q ss_pred CCCCCCCCCCCCCccceEeeCC-CcEEEEEEEecCceeEEEEeechhhhhccceEEEEEec
Q 047497 503 NKDPTKFNLVDPVERNTVGVPS-GGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVLD 562 (580)
Q Consensus 503 ~~~~~~~~~~~p~~rDTv~vp~-g~~v~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~~ 562 (580)
...+|+.+|++||||.|++ |+|++|||++||||.|+|||||++|++.||+++|.+.+
T Consensus 414 ---~~~~n~~~P~~rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~ 471 (495)
T 3t6v_A 414 ---NSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDI 471 (495)
T ss_dssp ---CCCCCSSSCCEESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEEEEETH
T ss_pred ---CCCcccCCCCCccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECh
Confidence 2357889999999999997 89999999999999999999999999999999997543
No 7
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=8e-92 Score=768.59 Aligned_cols=471 Identities=26% Similarity=0.465 Sum_probs=360.1
Q ss_pred ccceeEEEEEEEEEEe--eecCCce-eEEEEECCCCCCcEEEEecCCEEEEEEEecC-CCCceEEecCCccCCCCCCCCC
Q 047497 28 ALGVTRHYKFDIKLQN--VTRLCNT-KSIISVNGKFPGPRIVAREGDQLLIKVMNHV-QNNISIHWHGIRQLRSGWADGP 103 (580)
Q Consensus 28 ~~~~~~~~~l~~~~~~--~~~~g~~-~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l-~~~~~iH~HG~~~~~~~~~DGv 103 (580)
..+++++|+|++++.. +.++|.. +.+|+|||++|||+||+++||+|+|+|+|+| +++|+|||||+++.+++|+||+
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~ 108 (559)
T 2q9o_A 29 DTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGA 108 (559)
T ss_dssp CCCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC
T ss_pred CCCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCC
Confidence 4578899999999998 8899999 9999999999999999999999999999999 6899999999999998999999
Q ss_pred CCccccccCC-CCeEEEEEEECCCccceeEeeCccccc-ccceeeEEEeCCCCCCCCCCCCCCce-eeeeeccccCChHH
Q 047497 104 AYITQCPIQT-GQSYVYNFTIVGQRGTLWWHAHLSWLR-STLYGPIIILPKRGIPYPFTKPYKEV-PIIFGEWFKADPET 180 (580)
Q Consensus 104 ~~~tq~~i~P-G~~~~Y~f~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~d~e~-~l~~~d~~~~~~~~ 180 (580)
|++|||+|+| |++|+|+|++ .++||||||||...|. +||+|+|||++++.. .+|.|. +|+|+||+++...+
T Consensus 109 ~~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~-----~~d~d~~~l~l~Dw~~~~~~~ 182 (559)
T 2q9o_A 109 NGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPASL-----PYDIDLGVFPITDYYYRAADD 182 (559)
T ss_dssp BTTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHHH
T ss_pred CccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCcC-----CCcccceEEEEeccccCCHHH
Confidence 9999999999 9999999997 7899999999998887 799999999988643 247777 99999999998877
Q ss_pred HHHHhhhcCCCCCCCCeEEEcCCCCCCCCCC-CCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEecCCCcCC
Q 047497 181 IISQALQTGGGPNVSDAYTINGLPGPLYNCS-AKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVK 259 (580)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~-~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~ 259 (580)
+..... ++.+..++.++|||+... .|. ....+.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.+++
T Consensus 183 ~~~~~~--~~~~~~~d~~liNG~~~~--~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~ 258 (559)
T 2q9o_A 183 LVHFTQ--NNAPPFSDNVLINGTAVN--PNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVN 258 (559)
T ss_dssp HHHHHT--TSCCCCBSEEEETTBCBC--TTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEE
T ss_pred Hhhhhh--cCCCCccceeEECCcccc--CcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcccC
Confidence 654332 223446789999999753 343 224578999999999999999999999999999999999999999999
Q ss_pred ceEEeEEEeCCCceEEEEEEcCCCCCCceEEEEecc--ccCCCCCCCCcceEEEEEEecCCCCcccCCCCCCCCCcCCCC
Q 047497 260 PFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARP--YVTGQGTFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVL 337 (580)
Q Consensus 260 P~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~--~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~ 337 (580)
|+.+++|.|+|||||||+|++++.+ |+|+|++.. ...+. ........++|+|.++.. . .+.. +..
T Consensus 259 p~~~~~l~l~pgeR~dvlv~~~~~~--g~y~i~a~~~~~~~~~-~~~~~~~~ail~y~~~~~--------~-~P~~-~~~ 325 (559)
T 2q9o_A 259 AMTVDSLFLAVGQRYDVVIDASRAP--DNYWFNVTFGGQAACG-GSLNPHPAAIFHYAGAPG--------G-LPTD-EGT 325 (559)
T ss_dssp EEEESCEEECTTCEEEEEEECCSCS--SEEEEEEECCGGGTTC-CBSSSCCEEEEEETTSCC--------S-CCCC-CCC
T ss_pred ceEeCeEEEccEEEEEEEEECCCCC--CcEEEEEEeccccccC-CCCCCceeEEEEECCCCC--------C-CCCC-CCC
Confidence 9999999999999999999998865 899999986 32222 123345689999987542 1 1111 000
Q ss_pred CCCCCcccccccccccccccCCCCCCC-CCCCccceEEEEeccCcccCCCCCcccCCCCCeeeeeecceeeecC-chhhh
Q 047497 338 PALNDTSFATSFTNKLRSLASTQFPAN-VPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQASVNNISFVMP-TTALL 415 (580)
Q Consensus 338 p~~~~~~~~~~~~~~l~~l~~~~~p~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p-~~~~l 415 (580)
+. .+..+... ..|.++.....|.. .....+..+.+..... .+..+.|+|||++|..+ ..|+|
T Consensus 326 ~~-~~~~~~~~--~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~iNg~s~~~~~~~P~L 389 (559)
T 2q9o_A 326 PP-VDHQCLDT--LDVRPVVPRSVPVNSFVKRPDNTLPVALDLT-------------GTPLFVWKVNGSDINVDWGKPII 389 (559)
T ss_dssp CC-CCCTTCCC--SCCCBSSCCBCCCTTCCCCGGGEEEEEEECS-------------SSSSCEEEETTBCCCCCTTSCHH
T ss_pred cC-CCcccccc--cccccCCCCCCCCcccccceeEEEEEEeecC-------------CCceEEEEECCEecccCCCCCcH
Confidence 10 01000000 12222211111110 1111233444432210 12346799999999765 55666
Q ss_pred hhhhcCCccCccCCCCCCCCCeecccCCCCCCCccccCCceEEEecC-CCEEEEEEecCCC-CCCCCCCccccCCcEEEE
Q 047497 416 QAHFTGKSYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVLPF-NSSVELIMQDTSI-LGAESHPLHLHGFNFFVV 493 (580)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~-g~~v~~vi~n~~~-~~~~~HP~HlHG~~F~Vl 493 (580)
...+.+. .+|+ .+..++.++. +++++|+++|... ...+.||||||||+||||
T Consensus 390 ~~~~~g~------~~~~--------------------~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl 443 (559)
T 2q9o_A 390 DYILTGN------TSYP--------------------VSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVL 443 (559)
T ss_dssp HHHHHTC------CCCC--------------------GGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEE
T ss_pred hHhhcCC------ccCC--------------------CCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEE
Confidence 5544321 1221 1244566654 5778888888531 015799999999999999
Q ss_pred Eecc---------CcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEecCceeEEEEeechhhhhccceEEEEEecC
Q 047497 494 GQGF---------GNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVLDG 563 (580)
Q Consensus 494 ~~g~---------g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~~~ 563 (580)
+++. |.|++......+++.+|+|||||.|++++|++|||++||||.|||||||++|++.|||++|.|.++
T Consensus 444 ~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~ 522 (559)
T 2q9o_A 444 GRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPA 522 (559)
T ss_dssp EESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHH
T ss_pred ecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcc
Confidence 9987 666643223467889999999999999999999999999999999999999999999999988654
No 8
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=1.1e-91 Score=759.38 Aligned_cols=468 Identities=30% Similarity=0.536 Sum_probs=359.0
Q ss_pred EEEEEEEEEEeeecCCceeEEEEECCCCCCcEEEEecCCEEEEEEEecCC-----CCceEEecCCccCCCCCCCCCCCcc
Q 047497 33 RHYKFDIKLQNVTRLCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQ-----NNISIHWHGIRQLRSGWADGPAYIT 107 (580)
Q Consensus 33 ~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~-----~~~~iH~HG~~~~~~~~~DGv~~~t 107 (580)
.+|+|++++..+++||..+.+|+|||++ ||+||+++||+|+|+|+|+|+ ++|+|||||+++.+.+|+||+|++|
T Consensus 5 ~~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vt 83 (503)
T 1hfu_A 5 SVDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVN 83 (503)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccc
Confidence 4799999999999999999999999999 999999999999999999999 9999999999999889999999999
Q ss_pred ccccCCCCeEEEEEEECCCccceeEeeCccccc-ccceeeEEEeCCCCC-CCCCCCCCCceeeeeeccccCChHHHHHHh
Q 047497 108 QCPIQTGQSYVYNFTIVGQRGTLWWHAHLSWLR-STLYGPIIILPKRGI-PYPFTKPYKEVPIIFGEWFKADPETIISQA 185 (580)
Q Consensus 108 q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~-~~~~~~~d~e~~l~~~d~~~~~~~~~~~~~ 185 (580)
||+|+||++|+|+|++++++||||||||.+.|. +||+|+|||+++.+. +.++...++|++|+++||+++...++.
T Consensus 84 q~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~--- 160 (503)
T 1hfu_A 84 QCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQ--- 160 (503)
T ss_dssp BCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC---
T ss_pred cCCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhc---
Confidence 999999999999999778999999999999888 799999999987532 122322346999999999998765421
Q ss_pred hhcCCCCCCCCeEEEcCCCCCCCCCCC-CceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEecCCCcCCceEEe
Q 047497 186 LQTGGGPNVSDAYTINGLPGPLYNCSA-KDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETE 264 (580)
Q Consensus 186 ~~~~~~~~~~~~~liNG~~~~~~~~~~-~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d 264 (580)
+ ...++.++|||+.. +.|.. ...+.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.+++|+.++
T Consensus 161 ---~--~~~~d~~liNG~~~--~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~ 233 (503)
T 1hfu_A 161 ---G--AAQPDATLINGKGR--YVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVD 233 (503)
T ss_dssp --------CCSEEEETTBCC--BTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEES
T ss_pred ---C--CCCCCEEEECcccc--cCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCccccccccC
Confidence 1 13478999999974 55643 3458999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCceEEEEEEcCCCCCCceEEEEeccccCCCC---CCCCcceEEEEEEecCCCCcccCCCCCCCCCcCCCCCCCC
Q 047497 265 TLLIAPGQTTNVLLKTKPHYPSATFFMKARPYVTGQG---TFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALN 341 (580)
Q Consensus 265 ~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~ 341 (580)
+|.|+|||||||+|++++++ |+|+|++.+...+.. .+......++|+|++... . .+.. +..+...
T Consensus 234 ~l~l~pgeR~dvlv~~~~~~--g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~--------~-~p~~-~~~~~~~ 301 (503)
T 1hfu_A 234 RLQIFTGQRYSFVLDANQPV--DNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAAN--------A-DPTT-SANPNPA 301 (503)
T ss_dssp BEEECTTCEEEEEEECCSCS--SEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCS--------S-CCCC-CCCSSCC
T ss_pred eEEEcccceEEEEEEcCCCc--cceeeeeccccCCcccccccCCCceEEEEEECCCCC--------C-CCCC-CCCCccC
Confidence 99999999999999999865 999999986432211 122223469999987652 1 0111 1111100
Q ss_pred CcccccccccccccccCCCCCC-CCCCCccceEEEEeccCcccCCCCCcccCCCCCeeeeeecceeeecCchhhhhhhhc
Q 047497 342 DTSFATSFTNKLRSLASTQFPA-NVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQASVNNISFVMPTTALLQAHFT 420 (580)
Q Consensus 342 ~~~~~~~~~~~l~~l~~~~~p~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~ 420 (580)
... ...|+++.....+. ..+...+..+.++... ++. .|++||++|..+..|.|.+.+.
T Consensus 302 ~l~-----~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~--------------~~~--~~~iNg~~~~~~~~P~l~~~~~ 360 (503)
T 1hfu_A 302 QLN-----EADLHALIDPAAPGIPTPGAADVNLRFQLGF--------------SGG--RFTINGTAYESPSVPTLLQIMS 360 (503)
T ss_dssp BCC-----GGGCBBSSSCSCSSCSSTTCSSEEEECCEEE--------------ETT--EEEETTBCCCCCSSCHHHHHHT
T ss_pred CCc-----cccccccCccCCCCcccCCcceEEEEEEeec--------------cCc--eEEECCCccCCCCCcchhhhhc
Confidence 000 11333332222221 1122334333322211 112 5899999999887777665442
Q ss_pred CCccCccC-CCCCCCCCeecccCCCCCCCccccCCceEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCc
Q 047497 421 GKSYGVYN-PDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGN 499 (580)
Q Consensus 421 ~~~~g~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~ 499 (580)
+ .+. .+ ...++.++.++.|++|||+++|.. ..+.||||||||+||||+++.+.
T Consensus 361 g----~~~~~~--------------------~~~~~~~~~v~~g~~vei~l~~n~--~~~~HP~HLHGh~F~Vl~~~~~~ 414 (503)
T 1hfu_A 361 G----AQSAND--------------------LLPAGSVYELPRNQVVELVVPAGV--LGGPHPFHLHGHAFSVVRSAGSS 414 (503)
T ss_dssp T----CCSGGG--------------------SSSTTSEEEECSSCEEEEEEECCS--TTCCCEEEETTCCEEEEECTTCC
T ss_pred C----Cccccc--------------------CCCCceEEEccCCCEEEEEEECCC--CCCCCCEEEecceEEEEecCCCC
Confidence 2 110 01 123467889999999999999543 25899999999999999997442
Q ss_pred CCCCCCCCCCCCCCCCccceEee-CCCcEEEEEEEecCceeEEEEeechhhhhccceEEEEEecCCCCCCCCCCCC-CCC
Q 047497 500 FDPNKDPTKFNLVDPVERNTVGV-PSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVLDGKHPNQKLPPPP-ADL 577 (580)
Q Consensus 500 ~~~~~~~~~~~~~~p~~rDTv~v-p~g~~v~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~~~~~~~~~~~~~p-~~~ 577 (580)
.+++.+|.|||||.| ++++|++|||++||||.|+|||||+||++.|||++|.|.+.+ ..++.++| .+.
T Consensus 415 --------~~n~~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~--~~~~~~~p~~~~ 484 (503)
T 1hfu_A 415 --------TYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMAN--TVDANNPPVEWA 484 (503)
T ss_dssp --------CCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHH--HHHHCCCCHHHH
T ss_pred --------ccccCCCCeeeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchh--hhhccCCChHHh
Confidence 357789999999999 999999999999999999999999999999999999986543 23444444 445
Q ss_pred CCC
Q 047497 578 PQC 580 (580)
Q Consensus 578 ~~c 580 (580)
+.|
T Consensus 485 ~~C 487 (503)
T 1hfu_A 485 QLC 487 (503)
T ss_dssp HHH
T ss_pred hhc
Confidence 666
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=2.5e-83 Score=683.78 Aligned_cols=403 Identities=23% Similarity=0.348 Sum_probs=318.2
Q ss_pred ceeEEEEEEEEEEeeecCCceeEEEEECCCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCcccc
Q 047497 30 GVTRHYKFDIKLQNVTRLCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQC 109 (580)
Q Consensus 30 ~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~ 109 (580)
+.+++|+|++++..++++|..+.+|+|||++|||+||+++||+|+|+|+|+|+++|+|||||+++++ ++||++ +
T Consensus 14 ~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~----~ 87 (439)
T 2xu9_A 14 GGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPISP--KVDDPF----L 87 (439)
T ss_dssp TTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCCT--TTSCTT----C
T ss_pred CCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCCc--cccCCc----c
Confidence 5678999999999999999999999999999999999999999999999999999999999999986 699986 5
Q ss_pred ccCCCCeEEEEEEEC-CCccceeEeeCccc----cc-ccceeeEEEeCCCCCCCCCCCCCCceeeeeeccccCChHHH--
Q 047497 110 PIQTGQSYVYNFTIV-GQRGTLWWHAHLSW----LR-STLYGPIIILPKRGIPYPFTKPYKEVPIIFGEWFKADPETI-- 181 (580)
Q Consensus 110 ~i~PG~~~~Y~f~~~-~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~~~~-- 181 (580)
.|+||++|+|+|+++ +++||||||||.++ |. +||+|+|||+++.+. .+....++|++|+++||+++.....
T Consensus 88 ~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~-~~~~~~~~e~~l~l~D~~~~~~~~~~~ 166 (439)
T 2xu9_A 88 EIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDA-IPELREAEEHLLVLKDLALQGGRPAPH 166 (439)
T ss_dssp CBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGG-SHHHHTSEEEEEEEEEECEETTEECCC
T ss_pred cCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCcccc-CccCCCCCcEEEEEEeeeeCCCCcCCC
Confidence 699999999999985 58999999999865 33 799999999987542 1111347899999999988753100
Q ss_pred HHHhhhcCCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEecCCCcC-Cc
Q 047497 182 ISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYV-KP 260 (580)
Q Consensus 182 ~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v-~P 260 (580)
.......+ ..++.++|||+.. +.++|++| +|||||||+|+.+.+.|+|+||+|+||++||.++ +|
T Consensus 167 ~~~~~~~g---~~~~~~~iNG~~~----------p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~~p 232 (439)
T 2xu9_A 167 TPMDWMNG---KEGDLVLVNGALR----------PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEP 232 (439)
T ss_dssp CHHHHHHC---CCCSEEEETTEES----------CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEE
T ss_pred CccccccC---CCCCEEEECCccC----------CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCCCCc
Confidence 00000111 2458999999964 68999999 9999999999999999999999999999999997 89
Q ss_pred eEEeEEEeCCCceEEEEEEcCCCCCCceEEEEeccccCCCC--------------CCCCcceEEEEEEecCCCCcccCCC
Q 047497 261 FETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPYVTGQG--------------TFDNSTVAGILEYEKPLNFHLSSNS 326 (580)
Q Consensus 261 ~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~--------------~~~~~~~~ail~y~~~~~~~~~~~~ 326 (580)
+.++++.|+|||||||+|+++++ |+|+|++.....+.. ........++++|.+...
T Consensus 233 ~~~~~l~l~pgeR~dv~v~~~~~---G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------- 302 (439)
T 2xu9_A 233 LEVSELLLAPGERAEVLVRLRKE---GRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPK------- 302 (439)
T ss_dssp EEESCEEECTTCEEEEEEECCSS---EEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCC-------
T ss_pred eEeceEEECCceeEEEEEEcCCC---ceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCc-------
Confidence 99999999999999999999985 999999976433210 001235678888876431
Q ss_pred CCCCCCcCCCCCCCCCcccccccccccccccCCCCCCCCCCCccceEEEEeccCcccCCCCCcccCCCCCeeeeeeccee
Q 047497 327 IKNLPLFKPVLPALNDTSFATSFTNKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQASVNNIS 406 (580)
Q Consensus 327 ~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~ 406 (580)
+..+ |.... .+..+ + .+ ..++++.++... . + ..|++||++
T Consensus 303 ---~~~~----p~~l~---------~~~~l-----~--~~-~~~r~~~l~~~~--~------------g--~~~~iNg~~ 342 (439)
T 2xu9_A 303 ---PLPL----PKALS---------PFPTL-----P--AP-VVTRRLVLTEDM--M------------A--ARFFINGQV 342 (439)
T ss_dssp ---CCCC----CSCCC---------CCCCC-----C--CC-SEEEEEEEEEEG--G------------G--TEEEETTBC
T ss_pred ---cccC----cccCC---------CcccC-----C--CC-CcceEEEEEeec--c------------C--ceEeECCEE
Confidence 0001 11000 01111 1 11 123566555432 0 1 258899988
Q ss_pred eecCchhhhhhhhcCCccCccCCCCCCCCCeecccCCCCCCCccccCCceEEEecCCCEEEEEEecCCCCCCCCCCcccc
Q 047497 407 FVMPTTALLQAHFTGKSYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVLPFNSSVELIMQDTSILGAESHPLHLH 486 (580)
Q Consensus 407 ~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlH 486 (580)
|..+. ..+.++.|++++|+|+|.+ .+.||||||
T Consensus 343 ~~~~~--------------------------------------------~~~~~~~g~~~~~~~~N~~---~~~HP~HLH 375 (439)
T 2xu9_A 343 FDHRR--------------------------------------------VDLKGQAQTVEVWEVENQG---DMDHPFHLH 375 (439)
T ss_dssp CCTTC--------------------------------------------CCEEECTTCEEEEEEEECS---SSCEEEEES
T ss_pred CCCCC--------------------------------------------CceecCCCCEEEEEEEcCC---CCCCCceeC
Confidence 73221 0146778999999999964 489999999
Q ss_pred CCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEecCceeEEEEeechhhhhccceEEEEEe
Q 047497 487 GFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVL 561 (580)
Q Consensus 487 G~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~ 561 (580)
||+||||+++.+.+ .+|.|||||.|++++|++|||++||||.|+|||||++|+|.|||++|+|.
T Consensus 376 G~~F~Vl~~~g~~~-----------~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 376 VHPFQVLSVGGRPF-----------PYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp SCCBEEEEETTEEC-----------SSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred CCcEEEEeeCCCCC-----------CCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 99999999975432 36899999999999999999999999999999999999999999999883
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=2.2e-83 Score=684.84 Aligned_cols=406 Identities=17% Similarity=0.193 Sum_probs=316.3
Q ss_pred eeEEEEEEEEEEeeec-CCceeEEEEECCCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCcccc
Q 047497 31 VTRHYKFDIKLQNVTR-LCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQC 109 (580)
Q Consensus 31 ~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~ 109 (580)
..++|+|++++..+++ +|..+.+|+|||++|||+||+++||+|+|+|+|+|+++|+|||||++++++ +||+| ||
T Consensus 17 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~---~~ 91 (451)
T 2uxt_A 17 RGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP---AR 91 (451)
T ss_dssp SSCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG---GG
T ss_pred CceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC---cC
Confidence 3578999999999998 799999999999999999999999999999999999999999999999987 99998 89
Q ss_pred ccCCCCeEEEEEEECCCccceeEeeCccc----cc-ccceeeEEEeCCCCCCCCCCC--CCCceeeeeeccccCChHHHH
Q 047497 110 PIQTGQSYVYNFTIVGQRGTLWWHAHLSW----LR-STLYGPIIILPKRGIPYPFTK--PYKEVPIIFGEWFKADPETII 182 (580)
Q Consensus 110 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~--~d~e~~l~~~d~~~~~~~~~~ 182 (580)
+|+||++|+|+|++.+++||||||||.++ |. +||+|+|||+++++...+++. .++|++|+++||+++....+.
T Consensus 92 ~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~ 171 (451)
T 2uxt_A 92 MMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPE 171 (451)
T ss_dssp CBCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEE
T ss_pred cCCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCcee
Confidence 99999999999998556999999999955 33 899999999998654333333 478999999999987554321
Q ss_pred HHhhhcCCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEE-cCceeeEEecCCCcC-Cc
Q 047497 183 SQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSI-ANHTLTVVEADAIYV-KP 260 (580)
Q Consensus 183 ~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~v-~P 260 (580)
+...+.....++.++|||+.+ +.++|++| +|||||||+|+.+.+.|+| +||+|+||++||.++ +|
T Consensus 172 --~~~~~~~~~~~d~~liNG~~~----------p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P 238 (451)
T 2uxt_A 172 --YNEPGSGGFVGDTLLVNGVQS----------PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAP 238 (451)
T ss_dssp --CCCCSSSCCCCSEEEETTEES----------CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEE
T ss_pred --cccccCCCCcCCEEEECCccc----------ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCc
Confidence 111222344679999999975 67999999 9999999999999999999 899999999999997 89
Q ss_pred eEEeEEEeCCCceEEEEEEcCCCCCCceEEEEeccccCCCC-------CCCCcceEEEEEEecCCCCcccCCCCCCCCCc
Q 047497 261 FETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPYVTGQG-------TFDNSTVAGILEYEKPLNFHLSSNSIKNLPLF 333 (580)
Q Consensus 261 ~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~-------~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~ 333 (580)
+.++++.|+|||||||+|++++. ++|+|++.....+.+ ........++++|..... . .+..
T Consensus 239 ~~~~~l~l~pgeR~dvlv~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~--------~-~~~~ 306 (451)
T 2uxt_A 239 VSVKQLSLAPGERREILVDMSNG---DEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGL--------L-PLVT 306 (451)
T ss_dssp EEESSEEECTTCEEEEEEECTTC---CCEEEEC----------------CCCCSCCEEEEEEECSC--------C-C---
T ss_pred eEeceEEECceeEEEEEEEeCCC---CEEEEEecCccccccccccccccCCCCCCcceEEEEecCC--------C-cCcc
Confidence 99999999999999999999964 899999876432211 011233467888876541 0 0000
Q ss_pred CCCCCCCCCcccccccccccccccCCCCCCCCCCCccceEEEEeccCcccCCCCCcccCCCCCeeeeeecceeeecCchh
Q 047497 334 KPVLPALNDTSFATSFTNKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQASVNNISFVMPTTA 413 (580)
Q Consensus 334 ~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~ 413 (580)
..+|. .|.++... + .+...++++ .+. + .|+|||++|..+
T Consensus 307 -~~~p~------------~L~~~~~~--~--~~~~~~~~~--~l~----------------~---~~~iNg~~f~~~--- 345 (451)
T 2uxt_A 307 -DSLPM------------RLLPTEIM--A--GSPIRSRDI--SLG----------------D---DPGINGQLWDVN--- 345 (451)
T ss_dssp --CCCS------------CSSSSCCC--C--CCCSEEEEE--EEC----------------S---SSSBTTBCCCTT---
T ss_pred -ccCcc------------ccCCCCCC--C--CCCcceEEE--EEe----------------e---EEEECCEeCCCC---
Confidence 11111 12222111 1 122222333 221 1 378888877322
Q ss_pred hhhhhhcCCccCccCCCCCCCCCeecccCCCCCCCccccCCceEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEE
Q 047497 414 LLQAHFTGKSYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVV 493 (580)
Q Consensus 414 ~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl 493 (580)
...+.++.|++|+|+|+|. +.||||||||+||||
T Consensus 346 -----------------------------------------~~~~~~~~G~~~~~~l~N~-----~~HP~HLHGh~F~Vl 379 (451)
T 2uxt_A 346 -----------------------------------------RIDVTAQQGTWERWTVRAD-----EPQAFHIEGVMFQIR 379 (451)
T ss_dssp -----------------------------------------CCCEEEETTCEEEEEEEEE-----EEEEEEETTCEEEEE
T ss_pred -----------------------------------------CCcEEcCCCCEEEEEEECC-----CCcCeEECCceEEEE
Confidence 1125678999999999995 589999999999999
Q ss_pred EeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEecCcee----EEEEeechhhhhccceEEEEEecCC
Q 047497 494 GQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLADNPGV----WFMHCHLEVHTSWGLKMAWIVLDGK 564 (580)
Q Consensus 494 ~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~adnpG~----wl~HCHil~H~d~GM~~~~~V~~~~ 564 (580)
+++.. .+++.+|.|||||.| +++++|+|++||||. |||||||++|+|.|||++|+|.+..
T Consensus 380 ~~~G~---------~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~ 443 (451)
T 2uxt_A 380 NVNGA---------MPFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP 443 (451)
T ss_dssp EETTB---------CCCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSC
T ss_pred eeCCc---------CCCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCc
Confidence 99621 245667999999999 999999999999988 9999999999999999999998654
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=4.6e-81 Score=677.94 Aligned_cols=421 Identities=20% Similarity=0.294 Sum_probs=317.6
Q ss_pred eEEEEEEEEEE--eeecCCceeEEEEECCCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCcccc
Q 047497 32 TRHYKFDIKLQ--NVTRLCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQC 109 (580)
Q Consensus 32 ~~~~~l~~~~~--~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~ 109 (580)
+++|+|++++. .+.++|..+.+|+|||++|||+||+++||+|+|+|+|+|+++|+|||||+++++. +||++ ||
T Consensus 36 ~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~~--~DG~~---~~ 110 (534)
T 3abg_A 36 IWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRAA--FDGWA---ED 110 (534)
T ss_dssp CEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCTT--TTTCS---SS
T ss_pred eEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCCC--CCCCC---CC
Confidence 47899999964 4667888899999999999999999999999999999999999999999999874 99985 79
Q ss_pred ccCCCCeEEEEEEECCCccceeEeeCccccc-----ccceeeEEEeCCCCCCCCCCC--CCCceeeeeeccccCChHHHH
Q 047497 110 PIQTGQSYVYNFTIVGQRGTLWWHAHLSWLR-----STLYGPIIILPKRGIPYPFTK--PYKEVPIIFGEWFKADPETII 182 (580)
Q Consensus 110 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~-----~Gl~G~liV~~~~~~~~~~~~--~d~e~~l~~~d~~~~~~~~~~ 182 (580)
+|+||++|+|+|++.+++||||||||.++++ +||+|+|||+++.+..++++. .+.|++|+|+||+++....++
T Consensus 111 ~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~ 190 (534)
T 3abg_A 111 ITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLV 190 (534)
T ss_dssp CBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBC
T ss_pred CCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCcee
Confidence 9999999999999856689999999998753 799999999998876555544 267899999999876543321
Q ss_pred HHhhhcC-CCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcC-------ceeeEEecC
Q 047497 183 SQALQTG-GGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIAN-------HTLTVVEAD 254 (580)
Q Consensus 183 ~~~~~~~-~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~g-------h~~~via~D 254 (580)
. ..+ .....++.++|||+.+ +.++|++ ++|||||||+|+.+.+.|+|++ |+|+||++|
T Consensus 191 ~---~~~~~~~~~gd~~lvNG~~~----------p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~D 256 (534)
T 3abg_A 191 T---TNGELNSFWGDVIHVNGQPW----------PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASD 256 (534)
T ss_dssp C---CTTCSSCCCCSEEEETTEES----------CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEET
T ss_pred c---cCCCCccccCceeccCCccC----------ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEeC
Confidence 1 111 1233578999999976 4578888 5999999999999999999987 999999999
Q ss_pred CCc-CCceEEeEEEeCCCceEEEEEEcCCCCCCceEEEEecccc-CCCC-CCCCcceEEEEEEecCCCCcccCCCCCCCC
Q 047497 255 AIY-VKPFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPYV-TGQG-TFDNSTVAGILEYEKPLNFHLSSNSIKNLP 331 (580)
Q Consensus 255 G~~-v~P~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~-~~~~-~~~~~~~~ail~y~~~~~~~~~~~~~~~~~ 331 (580)
|++ .+|+.+++|.|+|||||||+|++++.+ +.+|+|++.... .+.+ ........++++|..... ....
T Consensus 257 G~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~-g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~--------~~~~ 327 (534)
T 3abg_A 257 SGLLEHPADTSLLYISMAERYEVVFDFSDYA-GKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADD--------TTQP 327 (534)
T ss_dssp TEEEEEEEEESCEEECTTCEEEEEEECSSCT-TSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCC--------SSCS
T ss_pred CCcccCceEeceEEECCccEEEEEEEcCCCC-CceEEEEeccccccccccccCcCCcceeEEEecCCC--------CcCC
Confidence 985 589999999999999999999999854 247999985421 1211 111123457889876441 0000
Q ss_pred CcCCCCCCCCCcccccccccccccccCCCCCCCCCCCccceEEEEeccCcccCCCCCcccCCCCCeeeeeecceeeecCc
Q 047497 332 LFKPVLPALNDTSFATSFTNKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQASVNNISFVMPT 411 (580)
Q Consensus 332 ~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~ 411 (580)
.. ...| ..|+.+.. + ..+...++++.+ .. . ...|+|||.+|..+.
T Consensus 328 ~~-~~~P------------~~L~~~~~---p-~~~~~~~~~~~~--~~--------------~--~~~w~iNG~~f~~~~ 372 (534)
T 3abg_A 328 DT-SVVP------------ANLRDVPF---P-SPTTNTPRQFRF--GR--------------T--GPTWTINGVAFADVQ 372 (534)
T ss_dssp CC-CCCC------------CCCCCCSC---C-CCCCCCCEEEEC--SC--------------C--CSTTCCCCBTTBCTT
T ss_pred CC-CCCc------------cccccCCC---C-CCccccceEEEE--ec--------------c--CceeEECCcccCCCC
Confidence 00 0011 11222211 1 111223443322 11 0 124789998874321
Q ss_pred hhhhhhhhcCCccCccCCCCCCCCCeecccCCCCCCCccccCCceEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEE
Q 047497 412 TALLQAHFTGKSYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFF 491 (580)
Q Consensus 412 ~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~ 491 (580)
.+ ....++.|++++|+|+|.+ ..+.||||||||+||
T Consensus 373 ~p------------------------------------------~l~~v~~G~~~~w~i~N~~--~~~~HP~HLHG~~F~ 408 (534)
T 3abg_A 373 NR------------------------------------------LLANVPVGTVERWELINAG--NGWTHPIHIHLVDFK 408 (534)
T ss_dssp SC------------------------------------------CCCEECTTCEEEEEEEECS--SSCCCCEEESSCCEE
T ss_pred Cc------------------------------------------ceeeccCCCEEEEEEEcCC--CCCCcCEEECCeeEE
Confidence 00 0135678999999999964 236999999999999
Q ss_pred EEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEE-ecCceeEEEEeechhhhhccceEEEEEecCC
Q 047497 492 VVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFL-ADNPGVWFMHCHLEVHTSWGLKMAWIVLDGK 564 (580)
Q Consensus 492 Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~-adnpG~wl~HCHil~H~d~GM~~~~~V~~~~ 564 (580)
||+++.|.+. . ...++.+ .|||||.|+++++++|||+ +||||.|+|||||++|+|.|||+.|.|...+
T Consensus 409 Vl~~~~g~~~--~--~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 409 VISRTSGNNA--R--TVMPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp EEEESSCCSS--S--CCCSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred EEEEcCCCCc--C--cCCcccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 9999655432 1 1234455 8999999999999999999 8999999999999999999999999998654
No 12
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=3.5e-80 Score=671.04 Aligned_cols=429 Identities=18% Similarity=0.238 Sum_probs=315.5
Q ss_pred eEEEEEEEEEEeeec--CCceeEEEEECCCCCCcEEEEecCCEEEEEEEecCCC----------------------CceE
Q 047497 32 TRHYKFDIKLQNVTR--LCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQN----------------------NISI 87 (580)
Q Consensus 32 ~~~~~l~~~~~~~~~--~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~----------------------~~~i 87 (580)
..+|+|++++....+ ++..+.+|+|||++|||+||+++||+|+|+|+|+|++ +|+|
T Consensus 25 ~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsi 104 (513)
T 2wsd_A 25 KTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVV 104 (513)
T ss_dssp CEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCE
T ss_pred ceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEE
Confidence 455999999987665 4568999999999999999999999999999999975 8999
Q ss_pred EecCCccCCCCCCCCCCC--ccccccCCCCeE---EEEEEECCCccceeEeeCcccc----c-ccceeeEEEeCCCCCCC
Q 047497 88 HWHGIRQLRSGWADGPAY--ITQCPIQTGQSY---VYNFTIVGQRGTLWWHAHLSWL----R-STLYGPIIILPKRGIPY 157 (580)
Q Consensus 88 H~HG~~~~~~~~~DGv~~--~tq~~i~PG~~~---~Y~f~~~~~~Gt~wYH~H~~~~----~-~Gl~G~liV~~~~~~~~ 157 (580)
||||+++++. +||+|+ ++||+|+||++| +|+|++.+++||||||||.++. . +||+|+|||+++.+..+
T Consensus 105 HwHGl~~~~~--~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~ 182 (513)
T 2wsd_A 105 HLHGGVTPDD--SDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKRL 182 (513)
T ss_dssp EEETCCCCGG--GSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGGG
T ss_pred EcCCCcCCCc--cCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccccccc
Confidence 9999999854 999996 799999999555 9999975689999999999763 3 79999999999876555
Q ss_pred CCCCCCCceeeeeeccccCChHHHHHHhh----------hcCCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEE
Q 047497 158 PFTKPYKEVPIIFGEWFKADPETIISQAL----------QTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYL 227 (580)
Q Consensus 158 ~~~~~d~e~~l~~~d~~~~~~~~~~~~~~----------~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~r 227 (580)
+++..++|++|+|+||+++...++..... ........+++++|||+.+ +.+++++ ++||
T Consensus 183 ~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~----------p~~~v~~-~~~R 251 (513)
T 2wsd_A 183 KLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW----------PYLEVEP-RKYR 251 (513)
T ss_dssp CCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES----------CEEECCS-SEEE
T ss_pred cCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc----------ceEEecC-CEEE
Confidence 56667899999999998765433211100 0011234578999999976 5689988 4899
Q ss_pred EEEEecCCCCeEEEEEcCc-eeeEEecCCCcC-CceEEeEEEeCCCceEEEEEEcCCCCCCce-EEEEeccccCCCCCCC
Q 047497 228 LRLINAALNDELFFSIANH-TLTVVEADAIYV-KPFETETLLIAPGQTTNVLLKTKPHYPSAT-FFMKARPYVTGQGTFD 304 (580)
Q Consensus 228 lRliN~~~~~~~~~~i~gh-~~~via~DG~~v-~P~~~d~l~l~pGeR~dv~v~~~~~~~~g~-y~i~~~~~~~~~~~~~ 304 (580)
|||||+|+.+.+.|+|+|| +|+|||+||.++ +|+.+++|.|+|||||||+|++++.+ |+ +.+++..... ..+.
T Consensus 252 lRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~--g~~~~l~~~~~~~--~~~~ 327 (513)
T 2wsd_A 252 FRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYE--GESIILANSAGCG--GDVN 327 (513)
T ss_dssp EEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGT--TCEEEEEECCCSS--SSCC
T ss_pred EEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCC--CcEEEEEeccccc--ccCC
Confidence 9999999999999999999 999999999998 89999999999999999999999865 55 4454432211 1112
Q ss_pred CcceEEEEEEecCCCCcccCCCCCCCCCcCCCCCCCCCcccccccccccccccCCCCCCCCCCCccceEEEEeccCcccC
Q 047497 305 NSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALNDTSFATSFTNKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPC 384 (580)
Q Consensus 305 ~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~ 384 (580)
.....++++|..... . . .+.. ..+|.. |..+.. .+. .+...++++.++.....
T Consensus 328 ~~~~~~il~~~~~~~------~-~-~~~~-~~~p~~------------l~~~~~--~~~-~~~~~~~~~~l~~~~~~--- 380 (513)
T 2wsd_A 328 PETDANIMQFRVTKP------L-A-QKDE-SRKPKY------------LASYPS--VQH-ERIQNIRTLKLAGTQDE--- 380 (513)
T ss_dssp TTTTTEEEEEECCSC------C-S-SCCC-CCCCSB------------CSCCGG--GCC-CCEEEEEEEEEEEEECT---
T ss_pred CCCCcceEEEEeccC------c-c-cCcc-CCCCcc------------ccCCCC--ccc-CCCcceEEEEEEeecCC---
Confidence 223457889976531 0 0 0000 111110 111100 010 11123445544432211
Q ss_pred CCCCcccCCCCCeeeeeecceeeecCchhhhhhhhcCCccCccCCCCCCCCCeecccCCCCCCCccccCCceEEEecCCC
Q 047497 385 QSNQTCQGPNGTMFQASVNNISFVMPTTALLQAHFTGKSYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVLPFNS 464 (580)
Q Consensus 385 ~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~ 464 (580)
.| ...|.+||.+|..+. .+.++.|+
T Consensus 381 ---------~g-~~~~~iNg~~~~~~~---------------------------------------------~~~~~~g~ 405 (513)
T 2wsd_A 381 ---------YG-RPVLLLNNKRWHDPV---------------------------------------------TETPKVGT 405 (513)
T ss_dssp ---------TS-CEEEEETTBCTTSCC---------------------------------------------CBCCBTTC
T ss_pred ---------CC-CceEeECCccCCCcc---------------------------------------------cEecCCCC
Confidence 11 235778987763210 12345799
Q ss_pred EEEEEEecCCCCCCCCCCccccCCcEEEEEeccC---cCCCCC------CCCCCCCCCCCccceEeeCCCcEEEEEEEe-
Q 047497 465 SVELIMQDTSILGAESHPLHLHGFNFFVVGQGFG---NFDPNK------DPTKFNLVDPVERNTVGVPSGGWVAIRFLA- 534 (580)
Q Consensus 465 ~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g---~~~~~~------~~~~~~~~~p~~rDTv~vp~g~~v~irf~a- 534 (580)
+|+|+|+|.+ .+.||||||||+||||+++.+ .|++.. .+......++.|||||.|+++++++|+|++
T Consensus 406 ~~~w~l~N~~---~~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~ 482 (513)
T 2wsd_A 406 TEIWSIINPT---RGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFG 482 (513)
T ss_dssp EEEEEEEECS---SSCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECC
T ss_pred EEEEEEEcCC---CCCcCEeEeCceEEEEEecCcccccccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEec
Confidence 9999999964 479999999999999998742 222111 011112234569999999999999999999
Q ss_pred cCceeEEEEeechhhhhccceEEEEEec
Q 047497 535 DNPGVWFMHCHLEVHTSWGLKMAWIVLD 562 (580)
Q Consensus 535 dnpG~wl~HCHil~H~d~GM~~~~~V~~ 562 (580)
||||.|+|||||++|+|.|||+.|+|.+
T Consensus 483 dnpG~w~~HCHil~H~~~GMm~~~~V~~ 510 (513)
T 2wsd_A 483 PYSGRYVWHCHALEHEDYDMMRPMDITD 510 (513)
T ss_dssp SCCEEEEEEESCHHHHTTTCEEEEEEBC
T ss_pred CCCCCEEEEcCChhhhhcCCceeEEEeC
Confidence 8999999999999999999999999975
No 13
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=4.3e-79 Score=651.47 Aligned_cols=419 Identities=21% Similarity=0.297 Sum_probs=307.5
Q ss_pred cceeEEEEEEEEEEeeec-CCceeEEEEECCCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCcc
Q 047497 29 LGVTRHYKFDIKLQNVTR-LCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYIT 107 (580)
Q Consensus 29 ~~~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~t 107 (580)
.+.+++|+|++++..+++ +|..+.+|+|||++|||+||+++||+|+|+|+|+|+++|+|||||+++++ ++||+|
T Consensus 47 ~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~p--- 121 (481)
T 3zx1_A 47 EKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPP--DQDGSP--- 121 (481)
T ss_dssp STTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCCG--GGSCCT---
T ss_pred CCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccCC--ccCCCc---
Confidence 367899999999999997 68999999999999999999999999999999999999999999999974 599997
Q ss_pred ccccCCCCeEEEEEEECCC-ccceeEeeCccc----cc-ccceeeEEEeCCCCCCCCCCCCCCceeeeeeccccCChHHH
Q 047497 108 QCPIQTGQSYVYNFTIVGQ-RGTLWWHAHLSW----LR-STLYGPIIILPKRGIPYPFTKPYKEVPIIFGEWFKADPETI 181 (580)
Q Consensus 108 q~~i~PG~~~~Y~f~~~~~-~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~~~~ 181 (580)
||+|+||++|+|+|+++++ +||||||||.++ |. +||+|+|||+++++..+++ ++++ |+++||+.+....+
T Consensus 122 q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g~~ 197 (481)
T 3zx1_A 122 HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENAQI 197 (481)
T ss_dssp TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTSCC
T ss_pred cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCCcc
Confidence 8999999999999998543 899999999854 33 8999999999987654433 3444 99999988654322
Q ss_pred HHHhhhcCCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEecCCCcC-Cc
Q 047497 182 ISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYV-KP 260 (580)
Q Consensus 182 ~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v-~P 260 (580)
.............++.++|||+.+ +.++|++|+ ||||||+|+.+.+.|+|+||+|+||++||.++ +|
T Consensus 198 ~~~~~~~~~~g~~gd~~lvNG~~~----------p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~~~~P 265 (481)
T 3zx1_A 198 PNNNLNDWLNGREGEFVLINGQFK----------PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKT 265 (481)
T ss_dssp CCCCHHHHHHCCCCSEEEETTEES----------CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTEEEEEE
T ss_pred ccccchhhccCCcCCEEEECCccC----------ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCCccCCc
Confidence 100000000123468999999965 689999998 99999999999999999999999999998765 89
Q ss_pred eEEeEEEeCCCceEEEEEEcCCCCCCceEEEEeccccCCCCCC-CCcceEEEEEEecCCCCcccCCCCCCCCCcCCCCCC
Q 047497 261 FETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPYVTGQGTF-DNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPA 339 (580)
Q Consensus 261 ~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~-~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~ 339 (580)
+.+++|.|+|||||||+|++++. +.|.|.+.......... .......++++..... . ..+ |.
T Consensus 266 ~~~~~l~l~pgeR~dvlv~~~~~---~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~----~~l----P~ 328 (481)
T 3zx1_A 266 IYKEELFLSPASRVEVLIDAPKD---GNFKLESAYYDRDKMMVKEEPNTLFLANINLKKE------N----VEL----PK 328 (481)
T ss_dssp EEESSEEECTTCEEEEEEECSSC---EEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECC------C----CCC----CS
T ss_pred eEeCeEEECCccEEEEEEEcCCC---cEEEEEEecccccCccccCCCCceeEEEEecCCC------C----ccC----Cc
Confidence 99999999999999999999975 88999886543211000 1112333444432111 0 011 11
Q ss_pred CCCcccccccccccccccCCCCCCCCCCCccceEEEEeccCcccCCCCCcccCCCCC-----eeeeeecceeeecCchhh
Q 047497 340 LNDTSFATSFTNKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGT-----MFQASVNNISFVMPTTAL 414 (580)
Q Consensus 340 ~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~in~~~~~~p~~~~ 414 (580)
.|..+.. . ..+ ...+++.+...... .. .......+. ...|++||..|.+
T Consensus 329 ------------~l~~~~~--~--~~~-~~~r~~~l~~~~~~--~~--~~~~~~~~~~~~~~~~~~~iNG~~~~~----- 382 (481)
T 3zx1_A 329 ------------NLKIFKP--S--EEP-KEFKEIIMSEDHMQ--MH--GMMGKSEGELKIALASMFLINRKSYDL----- 382 (481)
T ss_dssp ------------CSCCCCC--C--CCC-CEEEEEEEEECCST--TT--TGGGCCHHHHHHHHHTTEEETTBCCCT-----
T ss_pred ------------cccCCCC--C--CCC-CcEEEEEEeccchh--cc--cccccccccccccccceeEECCEeCCC-----
Confidence 1111100 0 111 13344444332110 00 000000000 0127777765521
Q ss_pred hhhhhcCCccCccCCCCCCCCCeecccCCCCCCCccccCCceEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEE
Q 047497 415 LQAHFTGKSYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVG 494 (580)
Q Consensus 415 l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~ 494 (580)
....+.++.|++|+|+|.|.+ .+.|||||||+.|+|++
T Consensus 383 ---------------------------------------~~~~~~~~~G~~v~w~l~N~~---~~~Hp~HlHG~~F~vl~ 420 (481)
T 3zx1_A 383 ---------------------------------------KRIDLSSKLGVVEDWIVINKS---HMDHPFHIHGTQFELIS 420 (481)
T ss_dssp ---------------------------------------TCCCEEEETTCCEEEEEEECS---SSCEEEEETTCCEEEEE
T ss_pred ---------------------------------------CCceEEeCCCCEEEEEEEcCC---CCceeEEEeccEEEEEE
Confidence 012357789999999999954 58999999999999999
Q ss_pred ec-cCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEecCceeEEEEeechhhhhccceEEEEEe
Q 047497 495 QG-FGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVL 561 (580)
Q Consensus 495 ~g-~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~ 561 (580)
+. .|. .....++.|||||.|+||++++|+|+|||||.|+|||||++|+|.|||+.|+|.
T Consensus 421 ~~~~g~--------~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 421 SKLNGK--------VQKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp EEETTE--------EEECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred ecccCC--------CCCcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 83 121 111235789999999999999999999999999999999999999999999996
No 14
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=1e-79 Score=655.49 Aligned_cols=395 Identities=19% Similarity=0.278 Sum_probs=300.2
Q ss_pred eEEEEEEEEEEeeecCCceeEEEEECCC-CCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCccccc
Q 047497 32 TRHYKFDIKLQNVTRLCNTKSIISVNGK-FPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQCP 110 (580)
Q Consensus 32 ~~~~~l~~~~~~~~~~g~~~~~~~~Ng~-~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~ 110 (580)
.++|+|++ |+|||+ +|||+||+++||+|+|+|+|+|+++|+|||||+++++ ++||+|+ |+
T Consensus 20 ~~~~~l~~--------------~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~~---~~ 80 (448)
T 3aw5_A 20 ATYIEATA--------------SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVNW--HNDAHPS---FA 80 (448)
T ss_dssp CSEEEEET--------------TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCH--HHHTCGG---GC
T ss_pred CcEEEEEE--------------EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCCC--ccCCCCC---cc
Confidence 55677777 999999 9999999999999999999999999999999999975 4999997 99
Q ss_pred cCCCCeEEEEEEECCCccceeEeeCcc----ccc-ccceeeEEEeCCCCCCCCCCCCC-CceeeeeeccccCChHHHHHH
Q 047497 111 IQTGQSYVYNFTIVGQRGTLWWHAHLS----WLR-STLYGPIIILPKRGIPYPFTKPY-KEVPIIFGEWFKADPETIISQ 184 (580)
Q Consensus 111 i~PG~~~~Y~f~~~~~~Gt~wYH~H~~----~~~-~Gl~G~liV~~~~~~~~~~~~~d-~e~~l~~~d~~~~~~~~~~~~ 184 (580)
|+||++|+|+|++++++||||||||.+ .|. +||+|+|||+++++. .+++ +| +|++|+++||+++. .++...
T Consensus 81 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~-~d~~e~~l~l~D~~~~~-~~~~~~ 157 (448)
T 3aw5_A 81 ITPGESYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFK-YGVNDLPLVISDRRFIG-GAPVYN 157 (448)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEEECCTTTHHHHHHTTCCEEEEEECTTTT-TTCC-BTTTEEEEEEEEEEEET-TEEECC
T ss_pred CCCCCEEEEEEEcCCCCCceEeccCCCCchHHHHhccceEEEEEeCCccc-cCCC-CCCceEEEEEEeeccCC-Cccccc
Confidence 999999999999855899999999954 344 899999999998764 3333 35 89999999998876 332110
Q ss_pred h-hhcCCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEE--cC---ceeeEEecCCCcC
Q 047497 185 A-LQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSI--AN---HTLTVVEADAIYV 258 (580)
Q Consensus 185 ~-~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i--~g---h~~~via~DG~~v 258 (580)
. ...+.....++.++|||+.+ +.++|++| +|||||||+|+.+.+.|+| +| |+|+||++||.++
T Consensus 158 ~~~~~~~~~~~~~~~liNG~~~----------p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~ 226 (448)
T 3aw5_A 158 PTPMEMIAGFLGNAVLVNGVKD----------AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFL 226 (448)
T ss_dssp CCHHHHHHCCCCSEEEETTEET----------CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEE
T ss_pred ccccccccCccccEEEECCccc----------ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCcc
Confidence 0 00001123568999999975 68999999 9999999999999999999 99 9999999999999
Q ss_pred C-ceEEeEEEeCCCceEEEEEEcCCCCCCceEEEEeccccCCCC----------CCCCcceEEEEEEecCCCCcccCCCC
Q 047497 259 K-PFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPYVTGQG----------TFDNSTVAGILEYEKPLNFHLSSNSI 327 (580)
Q Consensus 259 ~-P~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~----------~~~~~~~~ail~y~~~~~~~~~~~~~ 327 (580)
+ |+.++++.|+|||||||+|++++ +.|+|++.+...+.+ ........++++|.+...
T Consensus 227 ~~P~~~~~l~l~pgeR~dvlv~~~~----~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 294 (448)
T 3aw5_A 227 ARPIEVRALFLAPAERAEVVVELGE----GVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGE-------- 294 (448)
T ss_dssp EEEEEESCEEECTTCEEEEEEEECS----EEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECC--------
T ss_pred CCceEeceEEECCcceEEEEEECCC----CceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCC--------
Confidence 7 99999999999999999999982 799999986543221 112234567788866431
Q ss_pred CCCCCcCCCCCCCCCcccccccccccccccCCCCCCCCCCCccceEEEEeccCcccCCCCCcccCCCCCeeeeeecceee
Q 047497 328 KNLPLFKPVLPALNDTSFATSFTNKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQASVNNISF 407 (580)
Q Consensus 328 ~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~ 407 (580)
. +. |. .|..++. ...+...++++.++.+ ...|++||++|
T Consensus 295 ~------~~-p~------------~L~~lp~----~~~~~~~~~~~~l~~~------------------~~~~~iNg~~~ 333 (448)
T 3aw5_A 295 A------VP-VE------------ALSDPPP----EPPKPTRTRRFALSLS------------------GMQWTINGMFW 333 (448)
T ss_dssp C------CC-CC------------CCSCCCC----CCCCCSEEEEEEEEEE------------------TTEEEETTBCC
T ss_pred C------CC-cc------------ccCCCCC----CCCCCCceEEEEEeCC------------------CceeeECCCcC
Confidence 0 00 00 1111110 0122334555555431 12489999887
Q ss_pred ecCchhhhhhhhcCCccCccCCCCCCCCCeecccCCCCCCCccccCCceEEE-ecCCCEEEEEEecCCCCCCCCCCcccc
Q 047497 408 VMPTTALLQAHFTGKSYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTKLVV-LPFNSSVELIMQDTSILGAESHPLHLH 486 (580)
Q Consensus 408 ~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-v~~g~~v~~vi~n~~~~~~~~HP~HlH 486 (580)
..+. | .+. ++.|++|+|+|+|.+ ..+.||||||
T Consensus 334 ~~~~------------------------p--------------------~~~~~~~g~~v~~~i~N~~--~~~~HP~HLH 367 (448)
T 3aw5_A 334 NASN------------------------P--------------------LFEHVSVEGVELWEIVNDK--ASMPHPMHLH 367 (448)
T ss_dssp CTTC------------------------T--------------------TCCCEEECEEEEEEEEECS--SSCCEEEEES
T ss_pred CCCC------------------------C--------------------ceeccCCCCeEEEEEEcCC--CCCCcCEEEC
Confidence 4321 0 122 567999999999964 1489999999
Q ss_pred CCcEEEEEeccCcCCCCCCCCCC----CCCCCCccceEeeCCCcEEEEE--EE---ecCceeEEEEeechhhhhccceEE
Q 047497 487 GFNFFVVGQGFGNFDPNKDPTKF----NLVDPVERNTVGVPSGGWVAIR--FL---ADNPGVWFMHCHLEVHTSWGLKMA 557 (580)
Q Consensus 487 G~~F~Vl~~g~g~~~~~~~~~~~----~~~~p~~rDTv~vp~g~~v~ir--f~---adnpG~wl~HCHil~H~d~GM~~~ 557 (580)
||+||||+++ |.+........+ +..++.|||||.|+++++++|+ |+ +||| |+|||||++|+|.|||++
T Consensus 368 G~~F~Vl~~~-G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~ 444 (448)
T 3aw5_A 368 GFPMWIIERK-DSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMIN 444 (448)
T ss_dssp SSCBEEEEEE-SCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEE
T ss_pred CceEEEEEec-CCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceE
Confidence 9999999985 444311111122 2334579999999999999665 88 8999 999999999999999999
Q ss_pred EEEe
Q 047497 558 WIVL 561 (580)
Q Consensus 558 ~~V~ 561 (580)
|+|.
T Consensus 445 ~~V~ 448 (448)
T 3aw5_A 445 IAVK 448 (448)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9883
No 15
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=7.9e-79 Score=679.17 Aligned_cols=461 Identities=18% Similarity=0.242 Sum_probs=305.3
Q ss_pred eeEEEEEEEEEEeeec--CCceeEEEEECCCCCCcEEEEecCCEEEEEEEecCCCC------------------------
Q 047497 31 VTRHYKFDIKLQNVTR--LCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNN------------------------ 84 (580)
Q Consensus 31 ~~~~~~l~~~~~~~~~--~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~------------------------ 84 (580)
..+.|+|++++...++ ++..+.+|+|||++|||+|+|++||+|+|+|+|+|+++
T Consensus 31 ~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~~ 110 (612)
T 3gyr_A 31 VTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTEP 110 (612)
T ss_dssp TTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGSC
T ss_pred CcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCccccccc
Confidence 4567999998877655 55678999999999999999999999999999999654
Q ss_pred -----------------ceEEecCCccCCCCCCCCCCCccccccCCCCeEEEEEEECCCccceeEeeCccc----cc-cc
Q 047497 85 -----------------ISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLSW----LR-ST 142 (580)
Q Consensus 85 -----------------~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~----~~-~G 142 (580)
|+|||||+++++. +||++ ||+|+||++|+|+|++.+++||||||||.++ |. +|
T Consensus 111 ~~~~~~~~~~~~~~~~~ttiHwHGl~~~~~--~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~G 185 (612)
T 3gyr_A 111 GRGGVEPNKDVAALPAWSVTHLHGAQTGGG--NDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAG 185 (612)
T ss_dssp SCTTCCCCHHHHTCCCCBCEEEETCCCCTT--TSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTT
T ss_pred cccccccccccccCCCCceEEcCCCccCCc--ccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhcc
Confidence 6789999998754 99876 9999999999999998667899999999865 33 79
Q ss_pred ceeeEEEeCCCCCCCCCCCCCCceeeeeeccccCChHHHHHHhh-------------h---cCCCCCCCCeEEEcCCCCC
Q 047497 143 LYGPIIILPKRGIPYPFTKPYKEVPIIFGEWFKADPETIISQAL-------------Q---TGGGPNVSDAYTINGLPGP 206 (580)
Q Consensus 143 l~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~~~~~~~~~-------------~---~~~~~~~~~~~liNG~~~~ 206 (580)
|+|+|||+++++..++++.+++|++|+|+||+++.......... . .......++.++|||+.+
T Consensus 186 l~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~- 264 (612)
T 3gyr_A 186 LYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW- 264 (612)
T ss_dssp CEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES-
T ss_pred ceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCcc-
Confidence 99999999987766777778999999999997754322110000 0 001223568899999865
Q ss_pred CCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCc-------eeeEEecCCCcC-CceEE------eEEEeCCCc
Q 047497 207 LYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANH-------TLTVVEADAIYV-KPFET------ETLLIAPGQ 272 (580)
Q Consensus 207 ~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh-------~~~via~DG~~v-~P~~~------d~l~l~pGe 272 (580)
+.+.++. ++|||||||+|+.+.+.|+|++| +|+|||+||.++ +|+.+ +.|.|+|||
T Consensus 265 ---------p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pGe 334 (612)
T 3gyr_A 265 ---------PYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAE 334 (612)
T ss_dssp ---------CEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTC
T ss_pred ---------ceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccce
Confidence 5678875 68999999999999999999998 599999999988 46655 489999999
Q ss_pred eEEEEEEcCCCCCCceE-EEEeccccCCCC---CCCCcceEEEEEEecCCCCcccCCCCCCCCCcCCCCCCCCCcccccc
Q 047497 273 TTNVLLKTKPHYPSATF-FMKARPYVTGQG---TFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALNDTSFATS 348 (580)
Q Consensus 273 R~dv~v~~~~~~~~g~y-~i~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~ 348 (580)
||||+|++++.. |.+ ++.......... .........+++|..... ....... ++.......
T Consensus 335 RydVlV~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~----~p~~~~~~~--- 399 (612)
T 3gyr_A 335 RFDLLVDFRALG--GRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRET------CEEDSFA----LPEVLSGSF--- 399 (612)
T ss_dssp EEEEEEECTTCT--TCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECC------SCCCCCC----CCSSCCSSC---
T ss_pred EEEEEEECCCCC--ceEEEEEecCCcCCcCccCccccccccceeeecccCC------CCCCccc----ccccccccc---
Confidence 999999999875 544 444432211111 112233445666665432 0010111 111100000
Q ss_pred cccccccccCCCCCCCCCCCccceEEEEeccCcccCCCCCcccCCCCCeeeeeeccee----eecCchhhhhhhhcCCcc
Q 047497 349 FTNKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQASVNNIS----FVMPTTALLQAHFTGKSY 424 (580)
Q Consensus 349 ~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~----~~~p~~~~l~~~~~~~~~ 424 (580)
... ....+ .............. ........+.+.... +..+....+..
T Consensus 400 -----~~~-----~~~~~--~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 451 (612)
T 3gyr_A 400 -----RRM-----SHDIP--HGHRLIVLTPPGTK---------GSGGHPEIWEMAEVEDPADVQVPAEGVIQV------- 451 (612)
T ss_dssp -----CCC-----CTTSC--CEEEEEEEECTTCT---------TTTTCCEEEEEEECC-----CCSCTTEEEE-------
T ss_pred -----ccc-----ccccc--cccccccccccccc---------cccccccccccccccccccccccccceeee-------
Confidence 000 00000 00111000000000 000001111111100 00000000000
Q ss_pred CccCCCCCCCCCeecccCCCCCCCccccCCceEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCC
Q 047497 425 GVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNK 504 (580)
Q Consensus 425 g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~ 504 (580)
...+..+..+..++ ........+.++.|++|+|+|+|.+ .+.||||||||+||||+++.+.++...
T Consensus 452 -----~~~~~~~~~~~~n~------~~~~~~~~~~~~~g~~~~w~i~N~~---~~~HP~HLHG~~F~Vl~~~g~~~~~~~ 517 (612)
T 3gyr_A 452 -----TGADGRTKTYRRTA------RTFNDGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLGRDAYDASGFD 517 (612)
T ss_dssp -----ECTTSCEEEEEEEE------CSTTSCCCEEEETTCEEEEEEEECS---SSCEEEEESSCEEEEEEEEEEECTTEE
T ss_pred -----ccCCCccccccccC------ccCCCCcceEeCCCCEEEEEEEcCC---CCCcCEeECCCcEEEEeecCCcCcccc
Confidence 00000111111111 1112344578899999999999965 489999999999999998644332210
Q ss_pred ---------------CCCCCCCCCCCccceEeeCCCcEEEEEEE-ecCceeEEEEeechhhhhccceEEEEEecCC
Q 047497 505 ---------------DPTKFNLVDPVERNTVGVPSGGWVAIRFL-ADNPGVWFMHCHLEVHTSWGLKMAWIVLDGK 564 (580)
Q Consensus 505 ---------------~~~~~~~~~p~~rDTv~vp~g~~v~irf~-adnpG~wl~HCHil~H~d~GM~~~~~V~~~~ 564 (580)
.....+..++.|||||.|+++++++|||+ +||||.|||||||++|||.|||+.|+|.+++
T Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~ 593 (612)
T 3gyr_A 518 LALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPE 593 (612)
T ss_dssp TTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHH
T ss_pred ccccccccccccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCc
Confidence 01234567789999999999999999999 6999999999999999999999999998764
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=1.7e-77 Score=638.67 Aligned_cols=427 Identities=20% Similarity=0.272 Sum_probs=306.2
Q ss_pred ceeEEEEEEEEEEeeecCCceeEEEEECCCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCcccc
Q 047497 30 GVTRHYKFDIKLQNVTRLCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQC 109 (580)
Q Consensus 30 ~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~ 109 (580)
.+.+.|+|++++..++++|..+.+|+|||++|||+||+++||+|+|+|+|+|+++|+|||||+++++. +||+| ||
T Consensus 15 ~~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~p---~~ 89 (488)
T 3od3_A 15 DARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGE--VDGGP---QG 89 (488)
T ss_dssp CTTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCCHH--HHCCT---TC
T ss_pred CCCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccCcc--cCCCC---cC
Confidence 34578999999999999999999999999999999999999999999999999999999999999864 99997 89
Q ss_pred ccCCCCeEEEEEEECCCccceeEeeCccc----cc-ccceeeEEEeCCCCCCCCCCC--CCCceeeeeeccccCChHHHH
Q 047497 110 PIQTGQSYVYNFTIVGQRGTLWWHAHLSW----LR-STLYGPIIILPKRGIPYPFTK--PYKEVPIIFGEWFKADPETII 182 (580)
Q Consensus 110 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~--~d~e~~l~~~d~~~~~~~~~~ 182 (580)
+|+||++|+|+|++.+++||||||||.++ |. +||+|+|||+++++...+++. ..+|++|+++||+++...++.
T Consensus 90 ~i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~ 169 (488)
T 3od3_A 90 IIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQID 169 (488)
T ss_dssp CBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBC
T ss_pred cCcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCcee
Confidence 99999999999998556899999999865 33 799999999998654444443 246999999999886543221
Q ss_pred HHh-hhcCCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEE-cCceeeEEecCCCcC-C
Q 047497 183 SQA-LQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSI-ANHTLTVVEADAIYV-K 259 (580)
Q Consensus 183 ~~~-~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~v-~ 259 (580)
... .........++.++|||+.+ |.+.+ +|++|||||||+|+.+.+.|+| +||+|+|||+||.++ +
T Consensus 170 ~~~~~~~~~~g~~gd~~lvNG~~~----------p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~ 238 (488)
T 3od3_A 170 YQLDVMTAAVGWFGDTLLTNGAIY----------PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPE 238 (488)
T ss_dssp CCCSHHHHHHCCCCSEEEETTBSS----------CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEE
T ss_pred ccccccccccCCCCCEEEEcCCcC----------ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccC
Confidence 000 00000123568999999975 44555 5689999999999999999999 699999999999986 8
Q ss_pred ceEEeEEEeCCCceEEEEEEcCCCCCCceEEEEeccccCCCC---CCCCcceEEEEEEecCCCCcccCCCCCCCCCcCCC
Q 047497 260 PFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPYVTGQG---TFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPV 336 (580)
Q Consensus 260 P~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~ 336 (580)
|+.+++|.|+|||||||+|++++. +.|.|++........ .+. ....+++...... .....
T Consensus 239 P~~~~~l~l~pGeR~dvlv~~~~~---~~~~l~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~--------~~~~~---- 301 (488)
T 3od3_A 239 PVKVSELPVLMGERFEVLVEVNDN---KPFDLVTLPVSQMGMAIAPFD--KPHPVMRIQPIAI--------SASGA---- 301 (488)
T ss_dssp EEEESCEEECTTCEEEEEEEECTT---CCEEEEECCCSSTTTTSTTTT--SCEEEEEEEEEEE--------ECCCC----
T ss_pred ccEeceEEECCCCEEEEEEEeCCC---ceEEEEEeccCCCCccccccc--CccceeEeccccc--------CCCCC----
Confidence 999999999999999999999975 889998865332110 122 1223333332110 00001
Q ss_pred CCCCCCcccccccccccccccCCCCCCCCCCCccceEEEEeccCc--------------ccCCC-----------CCccc
Q 047497 337 LPALNDTSFATSFTNKLRSLASTQFPANVPQNVDRRFFFTVGLGT--------------SPCQS-----------NQTCQ 391 (580)
Q Consensus 337 ~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~--------------~~~~~-----------~~~~~ 391 (580)
+|. .|..+.. .+ .......+++.+.+.... ..... +..+.
T Consensus 302 ~P~------------~L~~~~~--~~-~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 366 (488)
T 3od3_A 302 LPD------------TLSSLPA--LP-SLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMN 366 (488)
T ss_dssp CCS------------CCCCCCC--CC-CCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCC
T ss_pred CCc------------ccccCCC--Cc-ccccccceEEEEEecccccccccccccccccccccccccccccccccccCccc
Confidence 111 0111100 01 111123455555432100 00000 00000
Q ss_pred -CCCCCee----eeeecceeeecCchhhhhhhhcCCccCccCCCCCCCCCeecccCCCCCCCccccCCceEEEecCCCEE
Q 047497 392 -GPNGTMF----QASVNNISFVMPTTALLQAHFTGKSYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVLPFNSSV 466 (580)
Q Consensus 392 -~~~~~~~----~~~in~~~~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~v 466 (580)
...|..+ .|+|||+.|.+. ...+.++.|++|
T Consensus 367 ~~~~g~~~~~~~~~~ING~~~~~~--------------------------------------------~~~~~~~~G~~e 402 (488)
T 3od3_A 367 HMNHGGKFDFHHANKINGQAFDMN--------------------------------------------KPMFAAAKGQYE 402 (488)
T ss_dssp CSCCCGGGCGGGCEEETTBCCCTT--------------------------------------------CCSEECCBSSCE
T ss_pred cccccccccccceeeECCeeCCCC--------------------------------------------CCceEcCCCCEE
Confidence 0001111 257777665211 112567889999
Q ss_pred EEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEec----CceeEEE
Q 047497 467 ELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLAD----NPGVWFM 542 (580)
Q Consensus 467 ~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~ad----npG~wl~ 542 (580)
+|.|.|.+. .+.|||||||++|+|++++... ....++.|||||.|+ |+++.|+|++| +||.|||
T Consensus 403 ~w~l~N~~~--~~~Hp~HlHg~~F~Vl~~~g~~---------~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~ 470 (488)
T 3od3_A 403 RWVISGVGD--MMLHPFHIHGTQFRILSENGKP---------PAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMA 470 (488)
T ss_dssp EEEEECTTC--CCCEEEEETTCCBEEEEBTTBC---------CCGGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEE
T ss_pred EEEEEeCCC--CCCccEEEcCceEEEeccCCCc---------cccccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEE
Confidence 999999752 4799999999999999985321 112346799999999 99999999974 5789999
Q ss_pred EeechhhhhccceEEEEE
Q 047497 543 HCHLEVHTSWGLKMAWIV 560 (580)
Q Consensus 543 HCHil~H~d~GM~~~~~V 560 (580)
||||++|+|.|||+.|+|
T Consensus 471 HCH~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 471 HCHLLEHEDTGMMLGFTV 488 (488)
T ss_dssp EESSHHHHHTTCEEEEEC
T ss_pred eCCchHHHhcCCcEEEEC
Confidence 999999999999999976
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=4.1e-76 Score=643.37 Aligned_cols=443 Identities=19% Similarity=0.269 Sum_probs=312.7
Q ss_pred eeEEEEEEEEEEeeec--CCceeEEEEECCCCCCcEEEEecCCEEEEEEEecCCCC------------------------
Q 047497 31 VTRHYKFDIKLQNVTR--LCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNN------------------------ 84 (580)
Q Consensus 31 ~~~~~~l~~~~~~~~~--~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~------------------------ 84 (580)
..++|+|++++....+ ++..+.+|+|||++|||+|++++||+|+|+|+|+|++.
T Consensus 31 ~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~p 110 (612)
T 2g23_A 31 VTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTEP 110 (612)
T ss_dssp TTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGSC
T ss_pred CeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCccccccc
Confidence 3678999999988775 34689999999999999999999999999999999853
Q ss_pred -----------------ceEEecCCccCCCCCCCCCCCccccccCCCCeEEEEEEECCCccceeEeeCccc----cc-cc
Q 047497 85 -----------------ISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLSW----LR-ST 142 (580)
Q Consensus 85 -----------------~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~----~~-~G 142 (580)
|+|||||+++.+. +||++ ||+|+||++|+|+|++.+++||||||||.++ |. +|
T Consensus 111 ~~~g~~~~~~~~~~~~~tsiH~HG~~~~~~--~DG~p---~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~G 185 (612)
T 2g23_A 111 GRGGVEPNKDVAALPAWSVTHLHGAQTGGG--NDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAG 185 (612)
T ss_dssp SCTTCCCCHHHHTCCCCBCEEEETCCCCTT--TSCCG---GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTTT
T ss_pred ccccccccccccccCCceEEEcCCCCCCCc--cCCCC---cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhcc
Confidence 8999999999876 99986 8999999999999998568999999999986 43 89
Q ss_pred ceeeEEEeCCCCCCCCCCCCCCceeeeeeccccCChHH-HHH-Hh------hh----cCC----CCCCCCeEEEcCCCCC
Q 047497 143 LYGPIIILPKRGIPYPFTKPYKEVPIIFGEWFKADPET-IIS-QA------LQ----TGG----GPNVSDAYTINGLPGP 206 (580)
Q Consensus 143 l~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~~~-~~~-~~------~~----~~~----~~~~~~~~liNG~~~~ 206 (580)
|+|+|||+++++..++++.+|+|++|+|+||+++.... .+. +. .. .++ .+..++.++|||+.+
T Consensus 186 L~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~~- 264 (612)
T 2g23_A 186 LYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW- 264 (612)
T ss_dssp CEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES-
T ss_pred ceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCccC-
Confidence 99999999987656666678999999999999864321 000 00 00 111 124579999999976
Q ss_pred CCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCc-------eeeEEecCCCcC-CceEEe------EEEeCCCc
Q 047497 207 LYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANH-------TLTVVEADAIYV-KPFETE------TLLIAPGQ 272 (580)
Q Consensus 207 ~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh-------~~~via~DG~~v-~P~~~d------~l~l~pGe 272 (580)
+.++|++| +|||||||+|+.+.+.|+|++| +|+|||+||+++ +|+.++ +|.|+|||
T Consensus 265 ---------p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~pge 334 (612)
T 2g23_A 265 ---------PYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAE 334 (612)
T ss_dssp ---------CEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTC
T ss_pred ---------CeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECCcC
Confidence 67999999 9999999999999999999999 899999999999 699999 99999999
Q ss_pred eEEEEEEcCCCCCCceEEEEeccccCCCCCC---CCcceEEEEEEecCCCCcccCCCCCCCCCcCCCCCCCCCccccccc
Q 047497 273 TTNVLLKTKPHYPSATFFMKARPYVTGQGTF---DNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALNDTSFATSF 349 (580)
Q Consensus 273 R~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~---~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~ 349 (580)
||||+|++++.+ |.+|+|+........+.. .......++++..... ...... .+|..
T Consensus 335 R~dvlVd~~~~~-g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~------~~~~~~----~~P~~--------- 394 (612)
T 2g23_A 335 RFDLLVDFRALG-GRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRET------CEEDSF----ALPEV--------- 394 (612)
T ss_dssp EEEEEEECTTCT-TCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECC------SCCCCC----CCCSS---------
T ss_pred eEEEEEECCCCC-CCEEEEEeCCccCCCCccccccCccccceEEEEEccC------CCCCCC----CCChh---------
Confidence 999999999864 467999876421111100 0011123555543321 000011 11111
Q ss_pred ccccccccCCCCCCCCCCCccceEEEEe---ccCcccC-----------------CCCCc--ccCCCCCeeeeeecceee
Q 047497 350 TNKLRSLASTQFPANVPQNVDRRFFFTV---GLGTSPC-----------------QSNQT--CQGPNGTMFQASVNNISF 407 (580)
Q Consensus 350 ~~~l~~l~~~~~p~~~p~~~~~~~~~~~---~~~~~~~-----------------~~~~~--~~~~~~~~~~~~in~~~~ 407 (580)
|+.. ...++..++. .+++.+.. ....... +.... ....+|....|++|+..|
T Consensus 395 ---L~~~-~~~l~~~~~~--~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~ 468 (612)
T 2g23_A 395 ---LSGS-FRRMSHDIPH--GHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATF 468 (612)
T ss_dssp ---CCSS-CCCCCTTSCC--EEEEEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECST
T ss_pred ---hccc-cccCCccccc--ceeEEeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccC
Confidence 1000 0000000110 11111110 0000000 00000 000011122334444332
Q ss_pred ecCchhhhhhhhcCCccCccCCCCCCCCCeecccCCCCCCCccccCCceEEEecCCCEEEEEEecCCCCCCCCCCccccC
Q 047497 408 VMPTTALLQAHFTGKSYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVLPFNSSVELIMQDTSILGAESHPLHLHG 487 (580)
Q Consensus 408 ~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG 487 (580)
. ....+.++.|++|+|+|.|.+ .+.|||||||
T Consensus 469 ~---------------------------------------------~~~~~~v~~G~~v~w~l~N~~---~~~HPiHlHg 500 (612)
T 2g23_A 469 N---------------------------------------------DGLGFTIGEGTHEQWTFLNLS---PILHPMHIHL 500 (612)
T ss_dssp T---------------------------------------------SCCCEEEETTCEEEEEEEECS---SSCEEEEESS
T ss_pred C---------------------------------------------CCCceEecCCCEEEEEEEeCC---CCCCCeEEcC
Confidence 1 123467889999999999975 4899999999
Q ss_pred CcEEEEEeccCcC---CCCCC------------CCCCCCCCCCccceEeeCCCcEEEEEEEec-CceeEEEEeechhhhh
Q 047497 488 FNFFVVGQGFGNF---DPNKD------------PTKFNLVDPVERNTVGVPSGGWVAIRFLAD-NPGVWFMHCHLEVHTS 551 (580)
Q Consensus 488 ~~F~Vl~~g~g~~---~~~~~------------~~~~~~~~p~~rDTv~vp~g~~v~irf~ad-npG~wl~HCHil~H~d 551 (580)
+.|+|++++.+.+ +.... ....+..++.|||||.|+||++++|+|+++ |||.|||||||++|+|
T Consensus 501 ~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed 580 (612)
T 2g23_A 501 ADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHED 580 (612)
T ss_dssp CCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHT
T ss_pred ceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhh
Confidence 9999999853222 11100 023445667899999999999999999998 9999999999999999
Q ss_pred ccceEEEEEecC
Q 047497 552 WGLKMAWIVLDG 563 (580)
Q Consensus 552 ~GM~~~~~V~~~ 563 (580)
.|||+.|+|.+.
T Consensus 581 ~GMm~~f~V~p~ 592 (612)
T 2g23_A 581 MGMMRPFVVMPP 592 (612)
T ss_dssp TTCEEEEEEECH
T ss_pred cCCceEEEECch
Confidence 999999999754
No 18
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=4.9e-53 Score=492.17 Aligned_cols=270 Identities=17% Similarity=0.258 Sum_probs=208.2
Q ss_pred ccccceeEEEEEEEEEEeeecC--Cc--------------------------eeEEE-------EECCC--------CCC
Q 047497 26 EPALGVTRHYKFDIKLQNVTRL--CN--------------------------TKSII-------SVNGK--------FPG 62 (580)
Q Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~--g~--------------------------~~~~~-------~~Ng~--------~pg 62 (580)
..+.+++|+|.+.|++..++.. +. .+.++ +||+. +||
T Consensus 15 ~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PG 94 (1065)
T 2j5w_A 15 TPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLG 94 (1065)
T ss_dssp -----CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSC
T ss_pred cccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCCcC
Confidence 3455889999999999877653 11 22233 57877 999
Q ss_pred cEEEEecCCEEEEEEEecCCCCceEEecCCccC----CCCCCCCCCC--ccccccCCCCeEEEEEEECCC---------c
Q 047497 63 PRIVAREGDQLLIKVMNHVQNNISIHWHGIRQL----RSGWADGPAY--ITQCPIQTGQSYVYNFTIVGQ---------R 127 (580)
Q Consensus 63 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~----~~~~~DGv~~--~tq~~i~PG~~~~Y~f~~~~~---------~ 127 (580)
|+||+++||+|+|+|+|+|+++++|||||++++ +.+|+||+++ ++||+|+||++|+|+|+++++ +
T Consensus 95 P~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~a 174 (1065)
T 2j5w_A 95 PIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNC 174 (1065)
T ss_dssp CCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSE
T ss_pred CeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCCc
Confidence 999999999999999999999999999999998 4577888888 899999999999999998544 5
Q ss_pred cceeEeeCccccc---ccceeeEEEeCCCCCCCCCC-CCCCceeeeee------ccccCChHHHHH-H-hhhcCCC---C
Q 047497 128 GTLWWHAHLSWLR---STLYGPIIILPKRGIPYPFT-KPYKEVPIIFG------EWFKADPETIIS-Q-ALQTGGG---P 192 (580)
Q Consensus 128 Gt~wYH~H~~~~~---~Gl~G~liV~~~~~~~~~~~-~~d~e~~l~~~------d~~~~~~~~~~~-~-~~~~~~~---~ 192 (580)
||||||||.+.+. +||+|+|||++++....|.+ ..|+|++|+++ ||+..+....+. . ....... .
T Consensus 175 GT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~~~~~~~~p~~~~~~~~~~~ 254 (1065)
T 2j5w_A 175 VTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYCSEPEKVDKDNEDFQ 254 (1065)
T ss_dssp EEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHHHHHHCSCGGGCCTTCHHHH
T ss_pred eEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccchhhhhhcCcccccccccccc
Confidence 9999999999875 89999999999875433322 35889999999 566543211110 0 0000000 0
Q ss_pred CCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCC-CeEEEEEcCceeeEEecCCCcCCceEEeEEEeCCC
Q 047497 193 NVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALN-DELFFSIANHTLTVVEADAIYVKPFETETLLIAPG 271 (580)
Q Consensus 193 ~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pG 271 (580)
..++.++|||+.+. ..+.+++++|++|||||+|+|.. ..+.|||+||+|+ ++|+.+|++.|+||
T Consensus 255 ~~~~~~~iNG~~~~-------~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~--------v~p~~~dtv~I~pG 319 (1065)
T 2j5w_A 255 QSNRMYSVNGYTFG-------SLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALT--------NKNYRIDTINLFPA 319 (1065)
T ss_dssp HHTEEEEETTEETT-------CCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEE--------ETTEEESEEEECBT
T ss_pred ccCcEEEECCccCC-------CCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEE--------ECCeeecEEEECCC
Confidence 12357899999741 24689999999999999999976 6899999999999 35789999999999
Q ss_pred ceEEEEEEcCCCCCCceEEEEeccccCCCCCCCCcceEEEEEEecCC
Q 047497 272 QTTNVLLKTKPHYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPL 318 (580)
Q Consensus 272 eR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 318 (580)
||+||+|+++++ |.|+|+|+...... .+..+.++|.+..
T Consensus 320 er~dVlv~~~~p---G~y~i~~h~~~h~~-----~Gm~~~~~V~~~~ 358 (1065)
T 2j5w_A 320 TLFDAYMVAQNP---GEWMLSCQNLNHLK-----AGLQAFFQVQECN 358 (1065)
T ss_dssp CEEEEEEECCSC---EEEEEEECSHHHHH-----TTCEEEEEEECSC
T ss_pred cEEEEEEEeCCC---eeEEEEecCcchhh-----CCCEEEEEEecCC
Confidence 999999999996 99999999753321 3567888887644
No 19
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=1.1e-53 Score=434.96 Aligned_cols=271 Identities=26% Similarity=0.428 Sum_probs=227.6
Q ss_pred eeEEEEEEEEEEeeec-CCceeEEEEECCCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCcccc
Q 047497 31 VTRHYKFDIKLQNVTR-LCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQC 109 (580)
Q Consensus 31 ~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~ 109 (580)
++++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|.++.+++|||||+++.++.++||+|+++||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 4799999999999888 578899999999999999999999999999999999999999999999988889999999999
Q ss_pred ccCCCCeEEEEEEECCCccceeEeeCccccc----ccceeeEEEeCCCCCCCCCCCCCCceeeeeeccccCChHHHHHHh
Q 047497 110 PIQTGQSYVYNFTIVGQRGTLWWHAHLSWLR----STLYGPIIILPKRGIPYPFTKPYKEVPIIFGEWFKADPETIISQA 185 (580)
Q Consensus 110 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~----~Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~~~~~~~~ 185 (580)
+|+||++++|+|++ +++||||||||.+.+. +||+|+|||++++..+.+. ..|+|++|+++||+...... .
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~~~~~----~ 154 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSSWANK----P 154 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGGGTTC----T
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeeccccccc----c
Confidence 99999999999997 7999999999997653 7999999999876422111 35889999999998753221 1
Q ss_pred hhcCCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEecCCCcC-CceEEe
Q 047497 186 LQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYV-KPFETE 264 (580)
Q Consensus 186 ~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v-~P~~~d 264 (580)
...+.....++.++|||+.++. ...+++++|++|||||+|++.. .+.|||+||.|+||+.||.++ +|..+|
T Consensus 155 ~~~~~~~~~~d~~~ING~~~~~-------~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~~~d 226 (318)
T 3g5w_A 155 GEGGIPGDVFDYYTINAKSFPE-------TQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPIKGD 226 (318)
T ss_dssp TCCCCTTCCCCEEEETTBCBTS-------SCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEEEES
T ss_pred ccCCCCCCcCcEEEEcCcCCCC-------CccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCcccc
Confidence 1112222356899999997642 2458999999999999999965 678999999999999999988 799999
Q ss_pred EEEeCCCceEEEEEEcCCCCCCceEEEEeccccCCCC-CCCCcceEEEEEEecCC
Q 047497 265 TLLIAPGQTTNVLLKTKPHYPSATFFMKARPYVTGQG-TFDNSTVAGILEYEKPL 318 (580)
Q Consensus 265 ~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~-~~~~~~~~ail~y~~~~ 318 (580)
++.|.||||+||+++++++ |.|.++|+....... ........++++|++..
T Consensus 227 tv~l~pger~~v~~~a~~p---G~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 227 TVLIGPGERYDVILNMDNP---GLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEEECTTCEEEEEEECCSC---SEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEEECCCCEEEEEEECCCC---eeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 9999999999999999987 999999996533321 01124567899998754
No 20
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=4.1e-52 Score=428.08 Aligned_cols=271 Identities=27% Similarity=0.495 Sum_probs=225.9
Q ss_pred eeEEEEEEEEEEeeecC-CceeEEEEECCCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCcccc
Q 047497 31 VTRHYKFDIKLQNVTRL-CNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQC 109 (580)
Q Consensus 31 ~~~~~~l~~~~~~~~~~-g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~ 109 (580)
++++|+|++++..++++ |..+.+|+|||++|||+|+|++||+|+|+|+|.++++++|||||+++.+.+|+||+|+++||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 47899999999999885 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeEEEEEEECCCccceeEeeCccc--c-c-ccceeeEEEeCCCCCCCCCCCCCCceeeeeeccccCChHHHHHHh
Q 047497 110 PIQTGQSYVYNFTIVGQRGTLWWHAHLSW--L-R-STLYGPIIILPKRGIPYPFTKPYKEVPIIFGEWFKADPETIISQA 185 (580)
Q Consensus 110 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~--~-~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~~~~~~~~ 185 (580)
+|+||++|+|+|++ +++||||||||... + . +||+|+|||+++.....+ ...|+|++++++||+...... .
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~-~~~d~e~~l~l~d~~~~~~~~----~ 155 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIE-KRVTKDVIMMMSTWESAVADK----Y 155 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTG-GGCSEEEEEEEEEECGGGTTC----T
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCccccc-ccCCceEEEEeeheecccccc----c
Confidence 99999999999997 79999999999876 3 3 799999999987643211 134789999999998632110 0
Q ss_pred hhcCCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEecCCCcCC-ceEEe
Q 047497 186 LQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVK-PFETE 264 (580)
Q Consensus 186 ~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~-P~~~d 264 (580)
...+.....++.++|||+.++. ...+++++|++|||||+|++. ..+.|||+||+|+||+.||.+++ |..+|
T Consensus 156 ~~~g~~~~~~~~~~ING~~~~~-------~~~~~v~~G~~vrlrliN~~~-~~h~~hlhGh~f~vi~~DG~~~~~p~~~d 227 (339)
T 2zwn_A 156 GEGGTPMNVADYFSVNAKSFPL-------TQPLRVKKGDVVKIRFFGAGG-GIHAMHSHGHDMLVTHKDGLPLDSPYYAD 227 (339)
T ss_dssp TCCCSTTSCCCEEEETTBCTTS-------SCCEEECTTCEEEEEEEECSS-SCEEEEETTCCEEEEEETTEEEEEEEEES
T ss_pred CCCCCCccccceEEEccccCCC-------cccEEECCCCEEEEEEEeCCC-ceEEEEECCcEEEEEEeCCeecCCCcEEE
Confidence 0011122246889999997642 245899999999999999995 48899999999999999999985 88999
Q ss_pred EEEeCCCceEEEEEEcCCCCCCceEEEEeccccCCCCC-CCCcceEEEEEEecCC
Q 047497 265 TLLIAPGQTTNVLLKTKPHYPSATFFMKARPYVTGQGT-FDNSTVAGILEYEKPL 318 (580)
Q Consensus 265 ~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~-~~~~~~~ail~y~~~~ 318 (580)
++.|.||||+||+++++++ |.|+++|+........ .......++++|++..
T Consensus 228 tv~l~pg~r~~v~~~~~~p---G~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 228 TVLVSPGERYDVIIEADNP---GRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EEEECTTCEEEEEEECCSC---SEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEECCCCEEEEEEEeCCC---eeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 9999999999999999987 9999999965432111 1224557999998654
No 21
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1.7e-54 Score=485.07 Aligned_cols=240 Identities=15% Similarity=0.196 Sum_probs=183.6
Q ss_pred EEEEEEEEEeeecC-CceeEEEEECCCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCC-------
Q 047497 34 HYKFDIKLQNVTRL-CNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAY------- 105 (580)
Q Consensus 34 ~~~l~~~~~~~~~~-g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~------- 105 (580)
+-.++++++..+.. |..+..|+ ++|||+||+++||+|+|+|+|+|++++||||||++++.. +||+|+
T Consensus 48 ~k~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~--~DG~p~~Dg~~~~ 122 (742)
T 2r7e_A 48 KKTLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKA--SEGAEYDDQTSQR 122 (742)
T ss_dssp ECCCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSS--SSCCCSSCSCCSS
T ss_pred EEEEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCcc--ccCCccCCCCccc
Confidence 33555555555554 55555554 899999999999999999999999999999999998753 666664
Q ss_pred -ccccccCCCCeEEEEEEECC---------CccceeEeeCcccc--c-ccceeeEEEeCCCCCCCCCCCCCCceeeeeec
Q 047497 106 -ITQCPIQTGQSYVYNFTIVG---------QRGTLWWHAHLSWL--R-STLYGPIIILPKRGIPYPFTKPYKEVPIIFGE 172 (580)
Q Consensus 106 -~tq~~i~PG~~~~Y~f~~~~---------~~Gt~wYH~H~~~~--~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d 172 (580)
++||+|+||++|+|+|++++ ++||||||||.+.+ . +||+|+|||+++.....+.....+|++|++++
T Consensus 123 ~vtq~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~ 202 (742)
T 2r7e_A 123 EKEDDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAV 202 (742)
T ss_dssp SSSSSSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEEC
T ss_pred ccccCcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeec
Confidence 89999999999999999843 46999999999873 3 79999999999865332221223888888754
Q ss_pred ------cccCChHHHHHHhhhcCCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCC-eEEEEEcC
Q 047497 173 ------WFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALND-ELFFSIAN 245 (580)
Q Consensus 173 ------~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~-~~~~~i~g 245 (580)
|+.......+.. ..........+.++|||+.. | ..+.+++++|++|||||+|+++.. .+.|||+|
T Consensus 203 ~de~~~w~~~~~~~~~~~-~~~~~~~~~~~~~~ING~~~----~---~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhG 274 (742)
T 2r7e_A 203 FDEGKSWHSETKNSLMQD-RDAASARAWPKMHTVNGYVN----R---SLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEG 274 (742)
T ss_dssp CCCSSSSCCCCCC--------CCSCCCCCCCCEETTBCT----B---CCCCCEECSSSCEEEECCCCCSSSCCCCCCCTT
T ss_pred ccCCcccccccccccccc-CCCccccccCceEEECCccC----C---CCcceEEcCCCEEEEEEEeCCCCCcceEEEECC
Confidence 555433211110 11111122356789999974 1 346799999999999999999775 78899999
Q ss_pred ceeeEEecCCCcCCceEEeEEEeCCCceEEEEEEcCCCCCCceEEEEecccc
Q 047497 246 HTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPYV 297 (580)
Q Consensus 246 h~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~ 297 (580)
|+|+|++ ..+|++.|.|||+++|+++++++ |.|+++|+...
T Consensus 275 h~f~Vvg--------~~~Dtv~v~Pg~~~~v~~~~~~p---G~w~~hCH~~~ 315 (742)
T 2r7e_A 275 HTFLVRN--------HRQASLEISPITFLTAQTLLMDL---GQFLLFCHISS 315 (742)
T ss_dssp CCCEETT--------EECCSCCCCTTCCCEEEECCCSC---SEECCCCCSSS
T ss_pred CEEEEEe--------EecceEEeCCCcEEEEEEEeCCC---eeEEEEeCChh
Confidence 9999985 34789999999999999999997 99999999643
No 22
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=2.5e-48 Score=397.83 Aligned_cols=261 Identities=20% Similarity=0.254 Sum_probs=219.5
Q ss_pred cceeEEEEEEEEEEeeec-CCceeEEEEECCCCCCcEEEEecCCEEEEEEEecCC--CCceEEecCCccCCCCCCCCCCC
Q 047497 29 LGVTRHYKFDIKLQNVTR-LCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQ--NNISIHWHGIRQLRSGWADGPAY 105 (580)
Q Consensus 29 ~~~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~--~~~~iH~HG~~~~~~~~~DGv~~ 105 (580)
.+++++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|.++ .++++||||+.. +||++.
T Consensus 35 ~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~-----~dG~~~ 109 (327)
T 1kbv_A 35 YPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGGGAA 109 (327)
T ss_dssp SCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGTT
T ss_pred CCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCcccc-----CCCCCc
Confidence 367899999999999998 799999999999999999999999999999999996 589999999852 788875
Q ss_pred ccccccCCCCeEEEEEEECCCccceeEeeCccc---cc-ccceeeEEEeCCCCCCCCCCCCCCceeeeeeccccCChHHH
Q 047497 106 ITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLSW---LR-STLYGPIIILPKRGIPYPFTKPYKEVPIIFGEWFKADPETI 181 (580)
Q Consensus 106 ~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~---~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~~~~ 181 (580)
.+ .|.||++++|+|++ +++||||||||.+. +. +||+|+|||++++. ++..|+|++++++||++.+....
T Consensus 110 ~~--~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~----~p~~d~e~~l~~~d~~~~~~~~~ 182 (327)
T 1kbv_A 110 AT--FTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG----LPKVDKEFYIVQGDFYTKGKKGA 182 (327)
T ss_dssp TT--CBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC----CCCCSEEEEEEEEEECBSSCTTC
T ss_pred ce--eecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC----CCCCceEEEEEeeeeeccCcccc
Confidence 44 49999999999997 78999999999753 33 79999999998753 23568999999999998652100
Q ss_pred -------HHHhhhcCCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEecC
Q 047497 182 -------ISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEAD 254 (580)
Q Consensus 182 -------~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~D 254 (580)
+... .+ ..++.++|||+.+++.. .+.+++++|++|||||+|+|+.+.+.|||+||+|+||+.|
T Consensus 183 ~g~~~~~~~~~--~~---~~~~~~~iNG~~~~~~~-----~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~D 252 (327)
T 1kbv_A 183 QGLQPFDMDKA--VA---EQPEYVVFNGHVGALTG-----DNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVE 252 (327)
T ss_dssp CEEECBCHHHH--HH---TCCSEEEETTSTTTTSG-----GGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGG
T ss_pred ccccccChhHh--cc---CCCceEEEcCcccCCCC-----ceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcC
Confidence 0000 01 24589999999875422 2579999999999999999998899999999999999999
Q ss_pred CCcCCceEEeEEEeCCCceEEEEEEcCCCCCCceEEEEeccccCCCCCCCCcceEEEEEEecCC
Q 047497 255 AIYVKPFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPL 318 (580)
Q Consensus 255 G~~v~P~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 318 (580)
|.+++|..++++.|+||||+||+|+++++ |.|+|+|+....+ ......++++|++..
T Consensus 253 G~~~~p~~~d~l~l~pGer~dv~v~~~~p---G~y~l~~h~~~~~----~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 253 GGKLINENVQSTIVPAGGSAIVEFKVDIP---GNYTLVDHSIFRA----FNKGALGQLKVEGAE 309 (327)
T ss_dssp GSSCEECSBSEEEECTTEEEEEEEEECSC---EEEEEEESSTHHH----HHSSCEEEEEEESCC
T ss_pred CCcCCCCceeEEEECCCCEEEEEEEeCCC---eEEEEEecccccc----ccCCcEEEEEECCCC
Confidence 99999999999999999999999999986 9999999865432 023568999998765
No 23
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=5.3e-49 Score=421.64 Aligned_cols=400 Identities=16% Similarity=0.121 Sum_probs=258.7
Q ss_pred ceeEEEEEEEEEEeeecCCceeEEEEECCCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCcccc
Q 047497 30 GVTRHYKFDIKLQNVTRLCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQC 109 (580)
Q Consensus 30 ~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~ 109 (580)
+.+++++++++...+..+| .+++|||++ ||+|+|++||+|+|+|+|.+...+++||||... .+||
T Consensus 26 ~~~~~~~~~~~~~~~~f~g---~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~-----------~~~~ 90 (447)
T 2dv6_A 26 PVVFTLRTGIAEGRMVYIG---VGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAA-----------RSAI 90 (447)
T ss_dssp CEEEEEEEEEETTEEEEEE---ESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTE-----------ECCC
T ss_pred CceEEEEEEecccEEEEec---cceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCc-----------ccce
Confidence 4556666666655555444 456899999 999999999999999999998889999998642 2579
Q ss_pred ccCCCCeEEEEEEECCCccceeEeeCccccc-ccceeeEEEeCCCCCCCCC-----CCCCCceeeeeeccccCChHHH-H
Q 047497 110 PIQTGQSYVYNFTIVGQRGTLWWHAHLSWLR-STLYGPIIILPKRGIPYPF-----TKPYKEVPIIFGEWFKADPETI-I 182 (580)
Q Consensus 110 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~-----~~~d~e~~l~~~d~~~~~~~~~-~ 182 (580)
+|+||++++|+|++ .++||||||||..+++ +||.|.|+|+++....+.. .....+++..+ |+.......+ +
T Consensus 91 ~i~pG~~~~~~f~~-~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~~l 168 (447)
T 2dv6_A 91 VNGKNASSTFSFVA-SKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRIDL 168 (447)
T ss_dssp BCSTTBEEEEEEEC-CSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEEEE
T ss_pred ecCCCCeEEEEEEc-CCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEEEE
Confidence 99999999999997 6799999999988776 7999999999876432210 00001111111 1100000000 0
Q ss_pred H-HhhhcCC-CCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCC-CCeEEEEEcCceeeEEecCCCcCC
Q 047497 183 S-QALQTGG-GPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAAL-NDELFFSIANHTLTVVEADAIYVK 259 (580)
Q Consensus 183 ~-~~~~~~~-~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~-~~~~~~~i~gh~~~via~DG~~v~ 259 (580)
. ....... .....+.+++||+. ..|+|++++|++|||||+|.+. ...+.+|+||. ++.||.+
T Consensus 169 ~~~~~~~~~~~g~~~~~~~~NG~~---------pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~DG~~-- 233 (447)
T 2dv6_A 169 ETVEVKGQLDDNTTYTYWTFNGKV---------PGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGPGGAA-- 233 (447)
T ss_dssp EEEEEEEEEETTEEEEEEEETTBB---------SCCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGGGGG--
T ss_pred EEEEEEEeccCCceeEEEEECCcc---------CCCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCCCCCC--
Confidence 0 0000000 01123578999984 2378999999999999999985 34667888874 3689973
Q ss_pred ceEEeEEEeCCCceEEEEEEcCCCCCCceEEEEeccccCCCCCCCCcceEEEEEEecCCCCcccCCCCCCCCCcCCCCCC
Q 047497 260 PFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPA 339 (580)
Q Consensus 260 P~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~ 339 (580)
+++.|.||||+++.++++++ |+||++|+...... . ...+..+.+.|..... + | .
T Consensus 234 ----~~~~i~pG~~~~~~~~~~~~---G~~~yh~h~~~~~~-~-~~~Gl~g~l~v~~~~~-------------~-P---~ 287 (447)
T 2dv6_A 234 ----AFTQTDPGEETVVTFKALIP---GIYVYHCATPSVPT-H-ITNGMYGLLLVEPEGG-------------L-P---Q 287 (447)
T ss_dssp ----GGCCBCTTCEEEEEEECCSC---EEEEEECCSSSHHH-H-HHTTCEEEEEEECTTC-------------S-C---C
T ss_pred ----ccEEeCCCCEEEEEEECCCC---eEEEEEeCCCChHH-H-HhCCCEEEEEEeCCCC-------------C-C---C
Confidence 23459999999999999876 99999998521000 0 0123456777764220 1 1 1
Q ss_pred CCCcccccccccccccccCCCCCCCCCCCccceEEEEeccCcccCCCCCcccCCCCCeeeeeecceeeecCchhhhhhhh
Q 047497 340 LNDTSFATSFTNKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQASVNNISFVMPTTALLQAHF 419 (580)
Q Consensus 340 ~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~ 419 (580)
. +..... .+...... ... ...... .+.... .. ......|.+||..+..
T Consensus 288 ~-d~~~~~----~~~~~~~~---~~~--~~~g~~--~~~~~~--------~~--~~~~~~~~iNG~~~~~---------- 335 (447)
T 2dv6_A 288 V-DREFYV----MQGEIYTV---KSF--GTSGEQ--EMDYEK--------LI--NEKPEYFLFNGSVGSL---------- 335 (447)
T ss_dssp C-SEEEEE----EEEEECBS---SCT--TCCEEC--CBBHHH--------HH--TTCCSEEEETTSTTCC----------
T ss_pred C-CeeEEE----EecccccC---Ccc--cccccc--cCChHH--------hh--ccCCCEEEECCcccCC----------
Confidence 1 000000 00000000 000 000000 000000 00 0011234566544310
Q ss_pred cCCccCccCCCCCCCCCeecccCCCCCCCccccCCceEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCc
Q 047497 420 TGKSYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGN 499 (580)
Q Consensus 420 ~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~ 499 (580)
.....+.++.|++++|+|.|.+. ...||||||||+|+||+.+.+
T Consensus 336 ---------------------------------~~~~~~~v~~g~~vrlrliN~~~--~~~h~~hlhGh~f~vv~~dG~- 379 (447)
T 2dv6_A 336 ---------------------------------TRSHPLYASVGETVRIFFGVGGP--NFTSSFHVIGEIFDHVYSLGS- 379 (447)
T ss_dssp ---------------------------------CCCCCEEECTTCEEEEEEEEEES--SCCEEEEEETCCEEEECGGGC-
T ss_pred ---------------------------------CCCcceEECCCCEEEEEEEeCCC--CceEeEEEcCcEEEEEEcCCc-
Confidence 00135788899999999999652 478999999999999998632
Q ss_pred CCCCCCCCCCCCCCCC-ccceEeeCCCcEEEEEEEecCceeEEEEeechhhhhccceEEEEEecCCC
Q 047497 500 FDPNKDPTKFNLVDPV-ERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVLDGKH 565 (580)
Q Consensus 500 ~~~~~~~~~~~~~~p~-~rDTv~vp~g~~v~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~~~~~ 565 (580)
+ +..|. +|||+.|++|+++.|+|++||||.|+||||+++|++.||+++|.|.....
T Consensus 380 ~----------~~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 380 V----------VSPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPKN 436 (447)
T ss_dssp S----------SSCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSCSC
T ss_pred c----------cCCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeCCCC
Confidence 1 12344 69999999999999999999999999999999999999999999976543
No 24
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=9.5e-48 Score=386.58 Aligned_cols=236 Identities=28% Similarity=0.373 Sum_probs=206.5
Q ss_pred ceeEEEEEEEEEEeeecC-CceeEEEEECCCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCccc
Q 047497 30 GVTRHYKFDIKLQNVTRL-CNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQ 108 (580)
Q Consensus 30 ~~~~~~~l~~~~~~~~~~-g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq 108 (580)
+.+++|+|++++..+.+. |..+.+|+|||++|||+|++++||+|+|+|+|.++++++|||||++. .++||+|+++|
T Consensus 32 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~---~~~DG~p~~~~ 108 (288)
T 3gdc_A 32 RTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPGIGA 108 (288)
T ss_dssp CEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCCC---GGGSCCTTSTT
T ss_pred CcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEeccccc---cccCCCCCccc
Confidence 567899999999988874 89999999999999999999999999999999999999999999983 46999999999
Q ss_pred cccCCCCeEEEEEEECCCccceeEeeCccc---cc-ccceeeEEEeCCCCCCCCCCCCCCceeeeeeccccCChHHHHHH
Q 047497 109 CPIQTGQSYVYNFTIVGQRGTLWWHAHLSW---LR-STLYGPIIILPKRGIPYPFTKPYKEVPIIFGEWFKADPETIISQ 184 (580)
Q Consensus 109 ~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~---~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~~~~~~~ 184 (580)
|+|+||++++|+|++ +++||||||||.+. +. +||+|+|||++++..+ ..|+|++|+++||+..+
T Consensus 109 ~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~----~~d~e~~l~~~d~~~~~------- 176 (288)
T 3gdc_A 109 GSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP----PADDEMVMVMNGYNTDG------- 176 (288)
T ss_dssp CSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCC----CCSEEEEEEEEEECCSS-------
T ss_pred eeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccCC----CCcceEEEEEeeEecCC-------
Confidence 999999999999998 89999999999974 33 8999999999987532 34799999999998762
Q ss_pred hhhcCCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCC-eEEEEEcCceeeEEecCCCcCCceEE
Q 047497 185 ALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALND-ELFFSIANHTLTVVEADAIYVKPFET 263 (580)
Q Consensus 185 ~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~v~P~~~ 263 (580)
+ ..++.++|||+.+++ ....+++++|++|||||+|++... .+.|||+||.|+|++.++....|...
T Consensus 177 ----g---~~~~~~~iNG~~~~~------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~~~~~~~~ 243 (288)
T 3gdc_A 177 ----G---DDNEFYSVNGLPFHF------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPSEYT 243 (288)
T ss_dssp ----T---TCCSEEEETTSTTHH------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCCSSCSEEE
T ss_pred ----C---CCcceEEECcccccc------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCccCCCcee
Confidence 1 135789999997632 124689999999999999999654 78999999999999854444467899
Q ss_pred eEEEeCCCceEEEEEEcCCCCCCceEEEEeccc
Q 047497 264 ETLLIAPGQTTNVLLKTKPHYPSATFFMKARPY 296 (580)
Q Consensus 264 d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~ 296 (580)
|++.|.||||++|+++++++ |.|.++|+..
T Consensus 244 Dtv~v~pg~~~~v~~~~~~p---G~~~~hCH~~ 273 (288)
T 3gdc_A 244 DTISQVQGQRGILELRFPYP---GKFMFHAHKT 273 (288)
T ss_dssp SEEEEETTCEEEEEECCCSC---EEEEEECSSH
T ss_pred eEEEeCCCceEEEEEECCCC---EEEEEEecCh
Confidence 99999999999999999988 9999999864
No 25
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=1.5e-46 Score=437.52 Aligned_cols=401 Identities=14% Similarity=0.158 Sum_probs=263.4
Q ss_pred ceeEEEEECCCCCC--cEEEEecCCEEEEEEEecCCCCceEEecCCccCC-CCCCCCCCCccccccCCCCeEEEEEEECC
Q 047497 49 NTKSIISVNGKFPG--PRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLR-SGWADGPAYITQCPIQTGQSYVYNFTIVG 125 (580)
Q Consensus 49 ~~~~~~~~Ng~~pg--P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~-~~~~DGv~~~tq~~i~PG~~~~Y~f~~~~ 125 (580)
..+.+.++||++|| |.|++++||+|+|+|.|. .+.+||||+++.+ +.|+||++.+| |+|.||.+++|+|++ .
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~-~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP-D 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-C
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-C
Confidence 46889999999999 889999999999999976 4459999999999 89999999999 999999999999997 7
Q ss_pred CccceeEeeCccccc-ccceeeEEEeCCCCCCCCCCCCCCceeeee----eccccCChHHHHHHhh-hcCCCCCCCCeEE
Q 047497 126 QRGTLWWHAHLSWLR-STLYGPIIILPKRGIPYPFTKPYKEVPIIF----GEWFKADPETIISQAL-QTGGGPNVSDAYT 199 (580)
Q Consensus 126 ~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~~----~d~~~~~~~~~~~~~~-~~~~~~~~~~~~l 199 (580)
++||||||||...++ +||.|.++|++......++..++.|.++++ .||++.+...+..+.. ..+.. +..++
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~---p~~~~ 767 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQN---VSNAF 767 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTCC---CCCTT
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCccC---cccee
Confidence 999999999999887 899999999987554444446688999999 8999987765433321 11211 22233
Q ss_pred EcCCCC----------------CCCCC----------CCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEec
Q 047497 200 INGLPG----------------PLYNC----------SAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEA 253 (580)
Q Consensus 200 iNG~~~----------------~~~~~----------~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~ 253 (580)
+|+... ..|+. -+...|.|.+++|+++|+|+.|.. ...+.+|.+|. .+...
T Consensus 768 ~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~-~~~~sih~HGl--~~~~~ 844 (1065)
T 2j5w_A 768 LDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMA-TRPYSIHAHGV--QTESS 844 (1065)
T ss_dssp TCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECS-SSCBCCEESSC--BCSCS
T ss_pred ecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCC-CCCceEeeccc--cccCC
Confidence 333211 01111 122458999999999999999996 45666888774 33332
Q ss_pred CCCcCCceEEeEEEeCCCceEEEEEEcCCCC-------CCceEEEEeccccCCCCCCCCcceEEEEEEecCCCCcccCCC
Q 047497 254 DAIYVKPFETETLLIAPGQTTNVLLKTKPHY-------PSATFFMKARPYVTGQGTFDNSTVAGILEYEKPLNFHLSSNS 326 (580)
Q Consensus 254 DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~-------~~g~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~ 326 (580)
|. ..+.||++++..+.+.+.. ..|.||.+++..... .+. .+..+.|.+.....
T Consensus 845 -~~---------~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~--q~~-~GL~G~liV~~~~~------- 904 (1065)
T 2j5w_A 845 -TV---------TPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVK--DLY-SGLIGPLIVCRRPY------- 904 (1065)
T ss_dssp -CC---------CCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHH--HHH-TTCEEEEEEECCC--------
T ss_pred -CC---------ceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHH--hhh-ccccceeEecCccc-------
Confidence 21 2467999988877775421 125899998742100 000 12233343432110
Q ss_pred CCCCCCcCCCCCCCCCcccccccccccccccCCCCCCCCCCCccceEEEEeccCcccCCCCCcccCCCCCeeeeeeccee
Q 047497 327 IKNLPLFKPVLPALNDTSFATSFTNKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQASVNNIS 406 (580)
Q Consensus 327 ~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~ 406 (580)
+.+. ..+...+..+.+.. +.. ++ .+....|+.+
T Consensus 905 ------l~~~---------------------------~~~~d~D~~l~~~~-~d~------------~~-~~y~~~n~~~ 937 (1065)
T 2j5w_A 905 ------LKVF---------------------------NPRRKLEFALLFLV-FDE------------NE-SWYLDDNIKT 937 (1065)
T ss_dssp -------------------------------------CCCCEEEEEEEEEE-EEG------------GG-STTHHHHHHH
T ss_pred ------cccc---------------------------CCCcceEEEEEEEe-ecC------------Cc-ceeeccCccc
Confidence 0000 00001111111110 000 00 0000112222
Q ss_pred eec-C-chhhhhhhhcCCccCccCCCCCCCCCeecccCCCCCCCccccCCceEEEecCCCEEEEEEecCCCCCCCCCCcc
Q 047497 407 FVM-P-TTALLQAHFTGKSYGVYNPDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVLPFNSSVELIMQDTSILGAESHPLH 484 (580)
Q Consensus 407 ~~~-p-~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vi~n~~~~~~~~HP~H 484 (580)
|.. | .++++...+.. .+..+..++ ........+.++.|++|+|+|.|.+. ..+.||||
T Consensus 938 ~~~~P~~v~~~~~~~~~-------------~~~~~~iNG------~~~~~~~~~~v~~G~~vr~~l~N~g~-~~~~HpfH 997 (1065)
T 2j5w_A 938 YSDHPEKVNKDDEEFIE-------------SNKMHAING------RMFGNLQGLTMHVGDEVNWYLMGMGN-EIDLHTVH 997 (1065)
T ss_dssp HCSCGGGCCTTCHHHHH-------------HTEEEEETT------BCTTCCCCCEEETTCEEEEEEEECCS-TTCCEEEE
T ss_pred ccCCccccCcchhhhhc-------------cCceEEECC------ccCCCCccEEeCCCCEEEEEEEeCCC-CCcceeEE
Confidence 210 1 11111100000 000111111 01112345788999999999999752 34789999
Q ss_pred ccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEecCceeEEEEeechhhhhccceEEEEEecCC
Q 047497 485 LHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVLDGK 564 (580)
Q Consensus 485 lHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~~~~ 564 (580)
||||.|+|++++ |.+||||.|+||++++|+|++||||.|+||||+++|++.|||++|+|.+.+
T Consensus 998 lHG~~F~vv~~~-----------------p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~ 1060 (1065)
T 2j5w_A 998 FHGHSFQYKHRG-----------------VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNE 1060 (1065)
T ss_dssp ESSCCEEETTTT-----------------CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC
T ss_pred EcccEEEEEecC-----------------CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCc
Confidence 999999998652 679999999999999999999999999999999999999999999998654
No 26
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=7.2e-45 Score=388.73 Aligned_cols=264 Identities=21% Similarity=0.240 Sum_probs=219.6
Q ss_pred ccceeEEEEEEEEEEeeec-CCceeEEEEECCCCCCcEEEEecCCEEEEEEEecCC--CCceEEecCCccCCCCCCCCCC
Q 047497 28 ALGVTRHYKFDIKLQNVTR-LCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQ--NNISIHWHGIRQLRSGWADGPA 104 (580)
Q Consensus 28 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~--~~~~iH~HG~~~~~~~~~DGv~ 104 (580)
..+.+++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+.+ +||++
T Consensus 24 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~~ 98 (442)
T 2zoo_A 24 DHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGGA 98 (442)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGG
T ss_pred CCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCCC
Confidence 3477899999999999995 899999999999999999999999999999999986 499999999874 68877
Q ss_pred CccccccCCCCeEEEEEEECCCccceeEeeCccc---cc-ccceeeEEEeCCCCCCCCCCCCCCceeeeeeccccCChHH
Q 047497 105 YITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLSW---LR-STLYGPIIILPKRGIPYPFTKPYKEVPIIFGEWFKADPET 180 (580)
Q Consensus 105 ~~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~---~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~~~ 180 (580)
..+ +|+||++++|+|++ +++||||||||.+. +. +||+|+|||++++.. +.+|+|++|+++||++.....
T Consensus 99 ~~~--~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~----~~~d~e~~l~l~d~~~~~~~~ 171 (442)
T 2zoo_A 99 ESS--FTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGL----APVDREYYLVQGDFYTKGEFG 171 (442)
T ss_dssp GGC--CBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCTT
T ss_pred ccE--EECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCC----CCCCceEEEEeeeeeccCccc
Confidence 543 69999999999997 88999999998643 33 899999999987532 256899999999999865310
Q ss_pred H-----HHHhhhcCCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEecCC
Q 047497 181 I-----ISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADA 255 (580)
Q Consensus 181 ~-----~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG 255 (580)
. +...... ...+++++|||+.++.. ..+.|++++|++|||||+|+|....+.|||+||+|+||+.||
T Consensus 172 ~~~~~~~~~~~~~---~~~~~~~liNG~~~~~~-----~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG 243 (442)
T 2zoo_A 172 EAGLQPFDMAKAI---DEDADYVVFNGSVGSTT-----DENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEG 243 (442)
T ss_dssp CCEEECBCHHHHH---TTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGG
T ss_pred ccccccCChhHhc---cCCCCEEEECCCcCCCC-----CCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCC
Confidence 0 0000001 13568999999975321 125799999999999999999889999999999999999999
Q ss_pred CcCCceEEeEEEeCCCceEEEEEEcCCCCCCceEEEEeccccCCCCCCCCcceEEEEEEecCC
Q 047497 256 IYVKPFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPL 318 (580)
Q Consensus 256 ~~v~P~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 318 (580)
.+++|..++++.|.||||+||+|+++++ |.|+++|+.+... ......++++|.+..
T Consensus 244 ~~~~p~~~~~~~l~pg~r~~v~v~~~~~---G~y~~~~~~~~~~----~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 244 GSLKNHNVQTTLIPAGGAAIVEFKVEVP---GTFILVDHSIFRA----FNKGALAMLKVEGPD 299 (442)
T ss_dssp SSCEECSBSEEEECTTEEEEEEEECCSC---EEEEEEESSTHHH----HTTSCEEEEEEESCC
T ss_pred ccCCCccceEEEECCCeeEEEEEEcCCC---CeEEEEecccccc----cccCceEEEEecCCC
Confidence 9999999999999999999999999986 9999999865431 124568999998765
No 27
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=1.8e-44 Score=360.45 Aligned_cols=240 Identities=21% Similarity=0.294 Sum_probs=198.1
Q ss_pred cccceeEEEEEEEEEEeeecCCceeEEEEECCCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCc
Q 047497 27 PALGVTRHYKFDIKLQNVTRLCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYI 106 (580)
Q Consensus 27 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 106 (580)
++.+++|+|+|++++.. .+.....++.|||++|||+||+++||+|+|+|+|+++++++|||||++++.. +||++ +
T Consensus 2 ~~~g~~~~~~l~~~~~~--~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~~--~DG~~-~ 76 (276)
T 3kw8_A 2 PAGGEVRHLKMYAEKLA--DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEIS--SDGTA-M 76 (276)
T ss_dssp --CCCEEEEEEEEEECT--TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCCT-T
T ss_pred CCcceEEEEEEEEEeCC--CCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCCc--cCCCc-C
Confidence 45788999999999864 2333345678999999999999999999999999999999999999999864 99999 9
Q ss_pred cccccCCCCeEEEEEEECC------------CccceeEeeCccc------cc-ccceeeEEEeCCCCCCCCCCCCCCcee
Q 047497 107 TQCPIQTGQSYVYNFTIVG------------QRGTLWWHAHLSW------LR-STLYGPIIILPKRGIPYPFTKPYKEVP 167 (580)
Q Consensus 107 tq~~i~PG~~~~Y~f~~~~------------~~Gt~wYH~H~~~------~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~ 167 (580)
+||+|+||++|+|+|++.+ ++||||||||.++ +. +||+|+|||+++.... .|+|++
T Consensus 77 t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~~-----~drE~~ 151 (276)
T 3kw8_A 77 NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVL-----PDATHT 151 (276)
T ss_dssp TTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCCC-----CSEEEE
T ss_pred CcCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCcc-----cccceE
Confidence 9999999999999999843 3799999999964 23 7999999999987522 389999
Q ss_pred eeeeccccCChHHHHHHhhhcCCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCce
Q 047497 168 IIFGEWFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHT 247 (580)
Q Consensus 168 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~ 247 (580)
|++++| +|||+.+. ..+.|+++.|++|||||+|.+. ..+.||||||.
T Consensus 152 l~l~~~-------------------------~iNG~~~~-------~~p~i~v~~G~~vri~l~N~~~-~~Hp~HlHG~~ 198 (276)
T 3kw8_A 152 IVFNDM-------------------------TINNRKPH-------TGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHR 198 (276)
T ss_dssp EEEETT-------------------------EETTCCTT-------CCCCEEEETTCEEEEEEEEESS-CCEEEEETTCC
T ss_pred EEeccc-------------------------ccceeccc-------CCCCEEEecCCEEEEEEecCCC-cceeEEEccce
Confidence 988763 79999753 4578999999999999999996 47889999999
Q ss_pred eeEEecCCCcC----CceEEeEEEeCCCceEEEEEEcCC--CCCCceEEEEeccccCCCCCCCCcceEEEEEEecC
Q 047497 248 LTVVEADAIYV----KPFETETLLIAPGQTTNVLLKTKP--HYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKP 317 (580)
Q Consensus 248 ~~via~DG~~v----~P~~~d~l~l~pGeR~dv~v~~~~--~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~y~~~ 317 (580)
|++++ ||... .+..+|++.|.|||++++.+++++ .+ |.|+++|+..... ..+..+.+.+...
T Consensus 199 f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~np--G~w~~HCH~~~H~-----~~GM~g~~~V~~~ 266 (276)
T 3kw8_A 199 WADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGA--GAWMYHCHVQSHS-----DMGMVGLFLVKKP 266 (276)
T ss_dssp EESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCS--EEEEEEECSHHHH-----HTTCEEEEEEECT
T ss_pred eEEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCC--CeEEEECCCchHh-----hCCCeEEEEEeCC
Confidence 99876 77543 246899999999999999999985 33 9999999953221 1345566666543
No 28
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=1.8e-43 Score=363.65 Aligned_cols=271 Identities=19% Similarity=0.199 Sum_probs=210.3
Q ss_pred cccceeEEEEEEEEEEeeec-CCceeEEEEECCCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCC
Q 047497 27 PALGVTRHYKFDIKLQNVTR-LCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAY 105 (580)
Q Consensus 27 ~~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~ 105 (580)
...+++++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|. .+++||||+++......||.++
T Consensus 27 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~~ 103 (333)
T 1mzy_A 27 ASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGGG 103 (333)
T ss_dssp SSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGGG
T ss_pred CCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCCc
Confidence 33467899999999999987 5999999999999999999999999999999999 5789999999887544566666
Q ss_pred ccccccCCCCeEEEEEEECCCccceeEeeCccc-----cc-ccceeeEEEeCCCCCCCC--C-CCCCCceeeeeeccccC
Q 047497 106 ITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLSW-----LR-STLYGPIIILPKRGIPYP--F-TKPYKEVPIIFGEWFKA 176 (580)
Q Consensus 106 ~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~-----~~-~Gl~G~liV~~~~~~~~~--~-~~~d~e~~l~~~d~~~~ 176 (580)
++| |+||++++|+|++ +++||||||||.++ +. +||+|+|||+++++.+.+ . ..+|+|++|+++||++.
T Consensus 104 ~~~--i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~ 180 (333)
T 1mzy_A 104 LTL--INPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRYDTVYYIGESDHYIP 180 (333)
T ss_dssp GCC--BCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCC
T ss_pred eeE--eCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCCccchheeeeeeeeccC
Confidence 664 9999999999997 78999999999974 44 799999999987542211 1 14588999999999883
Q ss_pred --ChHH---------HHHHhhhcCCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcC
Q 047497 177 --DPET---------IISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIAN 245 (580)
Q Consensus 177 --~~~~---------~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~g 245 (580)
.... .+....... ....++.++|||+.+++. ..+.+++++|++||||++|++....+ ..+++
T Consensus 181 ~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ING~~~~~~-----~~~~l~v~~Ger~Rl~n~~~~~~~~~-h~i~~ 253 (333)
T 1mzy_A 181 KDEDGTYMRFSDPSEGYEDMVAVM-DTLIPSHIVFNGAVGALT-----GEGALKAKVGDNVLFVHSQPNRDSRP-HLIGG 253 (333)
T ss_dssp BCTTSCBCCCSSHHHHHHHHHHHH-TTTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEESSSCBCE-EEETC
T ss_pred ccccccccccccccccccchhHHh-hccCCcEEEECCcccccC-----CCcceEecCCCEEEEEECCCCCcccc-EEECC
Confidence 1110 000000000 113468999999986431 14679999999988877766544334 34789
Q ss_pred ceeeEEecCCCcCC-ce-EEeEEEeCCCceEEEEEEcCCCCCCceEEEEeccccCCCCCCCCcceEEEEEEecCC
Q 047497 246 HTLTVVEADAIYVK-PF-ETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPL 318 (580)
Q Consensus 246 h~~~via~DG~~v~-P~-~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 318 (580)
|.++|++ ||.+++ |. .+|++.|.||||+||+|+++++ |+|+++|+..... ...+..++++|.+..
T Consensus 254 h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~p---G~y~~~ch~~~h~----~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 254 HGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQP---GVYAYVNHNLIEA----VHKGATAHVLVEGEW 320 (333)
T ss_dssp CEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCSC---EEEEEEESSHHHH----HTTCCEEEEEEESCC
T ss_pred CCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCCC---EEEEEecChhhhH----hhCCCEEEEEEcCCC
Confidence 9999999 999996 44 5899999999999999999986 9999999975432 023567899998754
No 29
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=7.3e-44 Score=362.31 Aligned_cols=241 Identities=20% Similarity=0.304 Sum_probs=197.9
Q ss_pred cccceeEEEEEEEEEEeeecCCc-eeEEEEECCCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCC
Q 047497 27 PALGVTRHYKFDIKLQNVTRLCN-TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAY 105 (580)
Q Consensus 27 ~~~~~~~~~~l~~~~~~~~~~g~-~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~ 105 (580)
++.+.+++|+|.+++ .++|. ...++.+||++|||+||+++||+|+|+|+|+|++++||||||+++... +||++
T Consensus 8 p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~--~dG~~- 81 (313)
T 3tas_A 8 PAGGEVKRIKLYAER---LGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEIS--SDGTK- 81 (313)
T ss_dssp CCCCCEEEEEEEEEE---CGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCST-
T ss_pred CCCceEEEEEEEEEE---cCCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCCcc--CCCCc-
Confidence 445788999998763 34553 345677899999999999999999999999999999999999999865 99998
Q ss_pred ccccccCCCCeEEEEEEEC------------CCccceeEeeCcccc-------cccceeeEEEeCCCCCCCCCCCCCCce
Q 047497 106 ITQCPIQTGQSYVYNFTIV------------GQRGTLWWHAHLSWL-------RSTLYGPIIILPKRGIPYPFTKPYKEV 166 (580)
Q Consensus 106 ~tq~~i~PG~~~~Y~f~~~------------~~~Gt~wYH~H~~~~-------~~Gl~G~liV~~~~~~~~~~~~~d~e~ 166 (580)
++||+|+||++|+|+|++. .++||||||||..++ .+||+|+|||+++... .+|+|+
T Consensus 82 ~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~d~e~ 156 (313)
T 3tas_A 82 QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDRTH 156 (313)
T ss_dssp TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB-----CCSEEE
T ss_pred cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccccc-----cccccc
Confidence 6999999999999999862 368999999998764 2799999999998752 348999
Q ss_pred eeeeeccccCChHHHHHHhhhcCCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCc
Q 047497 167 PIIFGEWFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANH 246 (580)
Q Consensus 167 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh 246 (580)
+|+++|| ++||+... ..+.++++.|++|||||+|++. ..+.|||+||
T Consensus 157 ~l~~~d~-------------------------t~Ng~~~~-------~~~~l~v~~Ge~vr~~liN~g~-~~hpfHlHGh 203 (313)
T 3tas_A 157 TIVFNDM-------------------------TINNRPAH-------TGPDFEATVGDRVEFVMITHGE-YYHTFHLHGH 203 (313)
T ss_dssp EEEEETT-------------------------EETTCCTT-------CCCCEEEETTCEEEEEEEEESS-CCEEEEETTC
T ss_pred eeeccch-------------------------hcccCCcc-------cccccccccCCEEEEEEecccc-cceeeeecCC
Confidence 9999987 35666542 3467999999999999999994 5678999999
Q ss_pred eeeEEecCCCcC---CceEEeEEEeCCCceEEEEEEcCCCCCCceEEEEeccccCCCCCCCCcceEEEEEEec
Q 047497 247 TLTVVEADAIYV---KPFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPYVTGQGTFDNSTVAGILEYEK 316 (580)
Q Consensus 247 ~~~via~DG~~v---~P~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~y~~ 316 (580)
.|+|++.||... .|..+|++.|.||||++++|.+.....-|.|.++|+..... ..+..+++.++.
T Consensus 204 ~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~~H~-----~~GM~~~f~V~~ 271 (313)
T 3tas_A 204 RWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHS-----DMGMVGLFLVKK 271 (313)
T ss_dssp CEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHH-----HTTCEEEEEEEC
T ss_pred eeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCChHHH-----HCCCeEEEEEEC
Confidence 999999999876 47889999999999999999886531119999999964322 134567777764
No 30
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=7.9e-44 Score=359.20 Aligned_cols=246 Identities=17% Similarity=0.252 Sum_probs=195.4
Q ss_pred ccccccceeEEEEEEEEEEeeecCCceeEEEEECCCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCC
Q 047497 24 LAEPALGVTRHYKFDIKLQNVTRLCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGP 103 (580)
Q Consensus 24 ~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv 103 (580)
++..+.+.++.|+|.+++.... .....++.+||++|||+||+++||+|+|+|+|+|++++||||||+++.+. +||+
T Consensus 21 ~p~~~~~~~~~~~~~a~~~~~~--~~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~--~DG~ 96 (299)
T 3t9w_A 21 MPVRAQGTTRRITMYAEKISDE--LYGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYDVN--SDGT 96 (299)
T ss_dssp ------CCEEEEEEEEEEEETT--EEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCC
T ss_pred CCcccCCCEEEEEEEEEecCCC--ceeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccCCc--cCCC
Confidence 4555668899999999875422 13344556799999999999999999999999999999999999998764 9999
Q ss_pred CCccccccCCCCeEEEEEEEC------------CCccceeEeeCccccc-------ccceeeEEEeCCCCCCCCCCCCCC
Q 047497 104 AYITQCPIQTGQSYVYNFTIV------------GQRGTLWWHAHLSWLR-------STLYGPIIILPKRGIPYPFTKPYK 164 (580)
Q Consensus 104 ~~~tq~~i~PG~~~~Y~f~~~------------~~~Gt~wYH~H~~~~~-------~Gl~G~liV~~~~~~~~~~~~~d~ 164 (580)
+ ++||+|+||++|+|+|+++ .++||||||||.+++. +||+|+|||+++... .+|+
T Consensus 97 ~-~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~-----~~d~ 170 (299)
T 3t9w_A 97 L-MNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDL-----LPKR 170 (299)
T ss_dssp T-TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSE
T ss_pred c-cccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEeccccc-----Cccc
Confidence 6 8999999999999999974 2689999999987642 699999999988752 3489
Q ss_pred ceeeeeeccccCChHHHHHHhhhcCCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEc
Q 047497 165 EVPIIFGEWFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIA 244 (580)
Q Consensus 165 e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~ 244 (580)
|++|++++|. +||+..+ ..+.++++.|++|||||+|++.. .+.|||+
T Consensus 171 e~~l~~~~~~-------------------------~Ng~~~~-------~~p~l~v~~Ge~Vr~~liN~~~~-~HpfHlH 217 (299)
T 3t9w_A 171 QFTVVFNDMM-------------------------INNRAHH-------DAPTFEANLGERVEWIAIGHGSN-FHTFHLH 217 (299)
T ss_dssp EEEEEEETTE-------------------------ETTCCTT-------CCCEEEEETTCEEEEEEEEESSC-CCEEEET
T ss_pred cceeeeeeee-------------------------ecCcccc-------ccccceecCCCEEEEEEEecccc-ceeeeEe
Confidence 9999998753 6777542 45789999999999999999964 4679999
Q ss_pred CceeeEEecCCCcCC---ceEEeEEEeCCCceEEEEEEcCCCCCCceEEEEeccccCCCCCCCCcceEEEEEEecC
Q 047497 245 NHTLTVVEADAIYVK---PFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKP 317 (580)
Q Consensus 245 gh~~~via~DG~~v~---P~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~y~~~ 317 (580)
||.|+++..|+.... +..+|++.|.||||++++|.+.+...-|.|.++|+..... ..+..+++.+...
T Consensus 218 Gh~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi~~H~-----~~GM~~~f~V~~~ 288 (299)
T 3t9w_A 218 GHRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQNHS-----DMGMAGMFLVRNA 288 (299)
T ss_dssp TCCEESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECSHHHH-----HTTCEEEEEEECT
T ss_pred cceEEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCCHHHH-----hcCCeEEEEEECC
Confidence 999999999987763 4578999999999999998765421119999999964322 1245566666543
No 31
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=7.1e-43 Score=359.78 Aligned_cols=268 Identities=21% Similarity=0.257 Sum_probs=203.8
Q ss_pred cceeEEEEEEEEEEeeec--CCceeEEEEECCCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCc
Q 047497 29 LGVTRHYKFDIKLQNVTR--LCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYI 106 (580)
Q Consensus 29 ~~~~~~~~l~~~~~~~~~--~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 106 (580)
.+.+++|+|++++..+++ ||..+.+|+|||++|||+|++++||+|+|+|+|.+. ++||||+++.+..++||.+.+
T Consensus 29 ~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~~~ 105 (336)
T 1oe1_A 29 GPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGAKL 105 (336)
T ss_dssp CCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGGGG
T ss_pred CCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCcce
Confidence 357789999999988764 599999999999999999999999999999999973 355666655554557776666
Q ss_pred cccccCCCCeEEEEEEECCCccceeEeeCccc----cc-ccceeeEEEeCCCCCCCCC---CCCCCceeeeeeccccC--
Q 047497 107 TQCPIQTGQSYVYNFTIVGQRGTLWWHAHLSW----LR-STLYGPIIILPKRGIPYPF---TKPYKEVPIIFGEWFKA-- 176 (580)
Q Consensus 107 tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~---~~~d~e~~l~~~d~~~~-- 176 (580)
+| |+||++++|+|++ +++||||||||.++ +. +||+|+|||+++++...+. ..+|+|++|+++||++.
T Consensus 106 ~~--i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~~~ 182 (336)
T 1oe1_A 106 TN--VNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIPKG 182 (336)
T ss_dssp CC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCBC
T ss_pred EE--eCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeeccc
Confidence 65 9999999999998 78999999999875 33 7999999999876422111 14588999999999874
Q ss_pred ChHHH---------HHHhhhcCCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEE-EcCc
Q 047497 177 DPETI---------ISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFS-IANH 246 (580)
Q Consensus 177 ~~~~~---------~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~-i~gh 246 (580)
+...+ +...... .....++.++|||+.+.+. ..+.+++++|++||| +|++..+.+.|+ |++|
T Consensus 183 ~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~liNG~~~~~~-----~~~~l~v~~GervRl--in~~~~~~~~~~~i~gh 254 (336)
T 1oe1_A 183 PDGKYKDYATLAESYGDTVQV-MRTLTPSHIVFNGKVGALT-----GANALTAKVGETVLL--IHSQANRDTRPHLIGGH 254 (336)
T ss_dssp TTSSBCCCSSTGGGHHHHHHH-HHTTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEE--EEEESSSCBCEEETTCC
T ss_pred cCCceeecccccccccchhhH-hhcCCCCEEEECCeeccCC-----CCcceEcCCCCEEEE--EecCCCCccceEEECCc
Confidence 11100 0000000 0013468999999986431 137899999997765 566655655544 5999
Q ss_pred eeeEEecCCCcCCce--EEeEEEeCCCceEEEEEEcCCCCCCceEEEEeccccCCCCCCCCcceEEEEEEecCC
Q 047497 247 TLTVVEADAIYVKPF--ETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPL 318 (580)
Q Consensus 247 ~~~via~DG~~v~P~--~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 318 (580)
.|+|++ ||.+++|. .++++.|++|||+||+|+++++ |.|+++|+..... ...+..++++|++..
T Consensus 255 ~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~p---G~y~~~~h~~~~~----~~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 255 GDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQP---GVYAYLNHNLIEA----FELGAAGHIKVEGKW 320 (336)
T ss_dssp EEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCSC---EEEEEEESSHHHH----HTTSCEEEEEEESCC
T ss_pred CceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCCC---ceEEEEechhhcc----ccCCCeEEEEECCCC
Confidence 999997 99999764 4689999999999999999996 9999999965321 023567899998754
No 32
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=2.2e-42 Score=356.76 Aligned_cols=268 Identities=18% Similarity=0.230 Sum_probs=204.4
Q ss_pred cceeEEEEEEEEEEeeecC--CceeEEEEECCCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCc
Q 047497 29 LGVTRHYKFDIKLQNVTRL--CNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYI 106 (580)
Q Consensus 29 ~~~~~~~~l~~~~~~~~~~--g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 106 (580)
.+.+++|+|++++..++++ |..+.+|+|||++|||+|++++||+|+|+|+|.+ +++||||+++.+....||...+
T Consensus 35 ~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~~~ 111 (340)
T 2bw4_A 35 GPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGGAL 111 (340)
T ss_dssp SCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGGGG
T ss_pred CCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCccc
Confidence 3678999999999988854 9999999999999999999999999999999998 7799999988765334444455
Q ss_pred cccccCCCCeEEEEEEECCCccceeEeeCccc----cc-ccceeeEEEeCCCCCC----CCCCCCCCceeeeeeccccC-
Q 047497 107 TQCPIQTGQSYVYNFTIVGQRGTLWWHAHLSW----LR-STLYGPIIILPKRGIP----YPFTKPYKEVPIIFGEWFKA- 176 (580)
Q Consensus 107 tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~----~~~~~~d~e~~l~~~d~~~~- 176 (580)
+| |.||++++|+|++ .++||||||||.++ +. +||+|+|||+++++.. .+. .+|+|++|+++||++.
T Consensus 112 ~~--i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~~~ 187 (340)
T 2bw4_A 112 TQ--VNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYVPK 187 (340)
T ss_dssp CC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECCCB
T ss_pred eE--eCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeeecc
Confidence 54 9999999999998 68999999999874 33 8999999999875311 111 3588999999999873
Q ss_pred -ChHH---------HHHHhhhcCCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCc
Q 047497 177 -DPET---------IISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANH 246 (580)
Q Consensus 177 -~~~~---------~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh 246 (580)
.... .+...... .....++.++|||+.+... ..+.+++++|++|||+++|++....+ .++++|
T Consensus 188 ~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~~~~-----~~~~l~v~~G~r~Rl~n~~~~~~~~~-~~i~gh 260 (340)
T 2bw4_A 188 DEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGALT-----GDHALTAAVGERVLVVHSQANRDTRP-HLIGGH 260 (340)
T ss_dssp CTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEESSSCBCE-EEETCC
T ss_pred ccCCcccccccccccccchhhH-hhcCCCCEEEECCccCCcc-----CCCceEcCCCCEEEEEECCCCCccce-EEecCc
Confidence 1110 11100000 0012458999999986321 14789999999887776665533333 458999
Q ss_pred eeeEEecCCCcCC-ce-EEeEEEeCCCceEEEEEEcCCCCCCceEEEEeccccCCCCCCCCcceEEEEEEecCC
Q 047497 247 TLTVVEADAIYVK-PF-ETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPL 318 (580)
Q Consensus 247 ~~~via~DG~~v~-P~-~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 318 (580)
.|+|++ ||.++. |. .++++.|.||||+||+|+++++ |+|+++|+..... ...+..++++|++..
T Consensus 261 ~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~p---G~y~~~~h~~~~h----~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 261 GDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQP---GVYAYVNHNLIEA----FELGAAGHFKVTGEW 326 (340)
T ss_dssp EEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCSC---EEEEEEESSHHHH----HTTSCEEEEEEESCC
T ss_pred ceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCCC---eeeEEEcCchHHH----HhCCCEEEEEECCCC
Confidence 999997 999885 43 5899999999999999999996 9999999975211 013456889998754
No 33
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=3e-40 Score=339.24 Aligned_cols=235 Identities=20% Similarity=0.288 Sum_probs=190.7
Q ss_pred ceeEEEEEEEEEEeeecCCceeE-EEEECCCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCccc
Q 047497 30 GVTRHYKFDIKLQNVTRLCNTKS-IISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQ 108 (580)
Q Consensus 30 ~~~~~~~l~~~~~~~~~~g~~~~-~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq 108 (580)
+++++|+|++++.. +|.... .+.+||++|||+|+|++||+|+|+|+|.++++++|||||++++ .++||++ ++|
T Consensus 46 g~~~~~~l~~~~~~---~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~-~t~ 119 (343)
T 3cg8_A 46 GEVRHLKMYAEKLA---DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTA-MNK 119 (343)
T ss_dssp CCEEEEEEEEEECG---GGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCT-TTT
T ss_pred CeEEEEEEEEEEcc---CCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCcc-ccc
Confidence 67899999999752 443211 1234899999999999999999999999999999999999988 4599999 899
Q ss_pred cccCCCCeEEEEEEECC------------CccceeEeeCccc------cc-ccceeeEEEeCCCCCCCCCCCCCCceeee
Q 047497 109 CPIQTGQSYVYNFTIVG------------QRGTLWWHAHLSW------LR-STLYGPIIILPKRGIPYPFTKPYKEVPII 169 (580)
Q Consensus 109 ~~i~PG~~~~Y~f~~~~------------~~Gt~wYH~H~~~------~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~ 169 (580)
|+|+||++++|+|++.. ++||||||||.++ +. +||+|+|||+++.+. .+|+|++|+
T Consensus 120 ~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~-----~pd~e~~l~ 194 (343)
T 3cg8_A 120 SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTIV 194 (343)
T ss_dssp CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEEE
T ss_pred ccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC-----CCCceEEEE
Confidence 99999999999999732 3599999999742 33 799999999988652 247899999
Q ss_pred eeccccCChHHHHHHhhhcCCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceee
Q 047497 170 FGEWFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLT 249 (580)
Q Consensus 170 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~ 249 (580)
++|| +|||+.++ ..+.++++.|++|||||+|.+. ..+.||||||.|+
T Consensus 195 ~~d~-------------------------~iNG~~~~-------~~~~l~v~~Ge~vri~l~N~g~-~~HpfHlHGh~f~ 241 (343)
T 3cg8_A 195 FNDM-------------------------TINNRKPH-------TGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHRWA 241 (343)
T ss_dssp EETT-------------------------EETTCCTT-------CCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCEE
T ss_pred cccc-------------------------eecccCCC-------CCccEEeCCCCEEEEEEEcCCc-cccccEecCcEEE
Confidence 8874 68998742 3468999999999999999996 5788999999999
Q ss_pred EEecCCCcCC----ceEEeEEEeCCCceEEEEEEcC---CCCCCceEEEEeccccCCCCCCCCcceEEEEEEecC
Q 047497 250 VVEADAIYVK----PFETETLLIAPGQTTNVLLKTK---PHYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKP 317 (580)
Q Consensus 250 via~DG~~v~----P~~~d~l~l~pGeR~dv~v~~~---~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~y~~~ 317 (580)
|++ ||.+.. +..+|++.|.|||+++++++++ ++ |.|+++|+..... .....+++.+...
T Consensus 242 v~~-~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~p---G~w~~HCHi~~H~-----~~GM~g~~~V~~~ 307 (343)
T 3cg8_A 242 DNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGA---GAWMYHCHVQSHS-----DMGMVGLFLVKKP 307 (343)
T ss_dssp SSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCS---EEEEEEECSHHHH-----HTTCEEEEEEECT
T ss_pred Eec-cCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCC---eeEEEeCCCHHHH-----hccCcEEEEEecC
Confidence 974 676543 4678999999999999999974 44 9999999954221 1345677777653
No 34
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=3e-40 Score=368.51 Aligned_cols=263 Identities=17% Similarity=0.188 Sum_probs=191.2
Q ss_pred cceeEEEEEEEEEEeeecC-------------C-ceeEE--EEE----------------CCCCCCcEEEEecCCEEEEE
Q 047497 29 LGVTRHYKFDIKLQNVTRL-------------C-NTKSI--ISV----------------NGKFPGPRIVAREGDQLLIK 76 (580)
Q Consensus 29 ~~~~~~~~l~~~~~~~~~~-------------g-~~~~~--~~~----------------Ng~~pgP~i~v~~Gd~v~v~ 76 (580)
.+++|+|.+-+++..+... | +.+++ ..| ++++|||+|++++||+|+|+
T Consensus 3 ~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~ 82 (647)
T 1sdd_B 3 TGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVR 82 (647)
T ss_dssp CCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEE
T ss_pred CCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEE
Confidence 3678999999999877654 1 11122 233 34899999999999999999
Q ss_pred EEecCCCCceEEecCCccCCCCCCCCCCCcc--------ccccCCCCeEEEEEEECCC-----cc----ceeEeeCccc-
Q 047497 77 VMNHVQNNISIHWHGIRQLRSGWADGPAYIT--------QCPIQTGQSYVYNFTIVGQ-----RG----TLWWHAHLSW- 138 (580)
Q Consensus 77 l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~t--------q~~i~PG~~~~Y~f~~~~~-----~G----t~wYH~H~~~- 138 (580)
|+|.++++++|||||++++.. +||+|+++ ||+|+||++|+|+|+++++ +| |||||||.+.
T Consensus 83 ~~N~l~~~~siH~HGl~~~~~--~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~ 160 (647)
T 1sdd_B 83 FKNLASRPYSLHAHGLSYEKS--SEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPE 160 (647)
T ss_dssp ECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHH
T ss_pred EEECCCCceEEecCcceeCCC--CCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCCc
Confidence 999999999999999999754 99999886 9999999999999998654 57 9999999975
Q ss_pred -cc-ccceeeEEEeCCCCCCC--CCCCCCCceeeeee------ccccCChHHHHHHhhhcCCCCCCCCeEEEcCCCCCCC
Q 047497 139 -LR-STLYGPIIILPKRGIPY--PFTKPYKEVPIIFG------EWFKADPETIISQALQTGGGPNVSDAYTINGLPGPLY 208 (580)
Q Consensus 139 -~~-~Gl~G~liV~~~~~~~~--~~~~~d~e~~l~~~------d~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~ 208 (580)
+. +||+|+|||+++..... ..+..++|++|+++ ||+++.......... .......++.++|||+.+
T Consensus 161 ~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~-~~~~~~~~~~~~iNG~~~--- 236 (647)
T 1sdd_B 161 KDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRA-SSEVKNSHEFHAINGMIY--- 236 (647)
T ss_dssp HHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC----------------CCCEEEEETTBSS---
T ss_pred ccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccC-CcchhhcCceeccCCEec---
Confidence 33 79999999999864321 12234689999999 787765432100000 111123468899999974
Q ss_pred CCCCCceeEEEEeCCCEEEEEEEecCCCC-eEEEEEcCceeeEEecCCCcCCceEEeEEEeCCCceEEEEEEcCCCCCCc
Q 047497 209 NCSAKDTFKLKVKPGKTYLLRLINAALND-ELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTKPHYPSA 287 (580)
Q Consensus 209 ~~~~~~~~~l~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~~~g 287 (580)
..+.+++++|++|||||+|+++.. .+.||||||.|+|++.|| ..+|++.|.||||+||+|+++++ |
T Consensus 237 -----~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~pg~r~~v~~~~~~p---G 303 (647)
T 1sdd_B 237 -----NLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLLPGSFKTLEMKASKP---G 303 (647)
T ss_dssp -----CCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEECTTEEEEEEEECCSS---E
T ss_pred -----CCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEECCCeEEEEEEEeccc---e
Confidence 237899999999999999999865 789999999999999886 57899999999999999999997 9
Q ss_pred eEEEEeccccCCCCCCCCcceEEEEEEe
Q 047497 288 TFFMKARPYVTGQGTFDNSTVAGILEYE 315 (580)
Q Consensus 288 ~y~i~~~~~~~~~~~~~~~~~~ail~y~ 315 (580)
.|.++|+...... .+..+++.+.
T Consensus 304 ~w~~hch~~~h~~-----~Gm~~~~~V~ 326 (647)
T 1sdd_B 304 WWLLDTEVGEIQR-----AGMQTPFLIV 326 (647)
T ss_dssp EEEEECCCHHHHT-----TTCEEEEEEE
T ss_pred EeecccCcccccc-----cccccceeee
Confidence 9999999643321 2345555554
No 35
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=2.8e-41 Score=342.41 Aligned_cols=214 Identities=18% Similarity=0.264 Sum_probs=158.6
Q ss_pred eEEEEECCCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCC------cc--ccccCCCCeEEEEEE
Q 047497 51 KSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAY------IT--QCPIQTGQSYVYNFT 122 (580)
Q Consensus 51 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~------~t--q~~i~PG~~~~Y~f~ 122 (580)
+...++| ++|||+|+|++||+|+|+|+|.++++++|||||++++.. +||++. ++ ||+|+||++|+|+|+
T Consensus 49 ~~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~--~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~ 125 (306)
T 1sdd_A 49 KPQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKF--SEGASYSDHTLPMEKMDDAVAPGQEYTYEWI 125 (306)
T ss_dssp CCCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTT--TSCCCSCCCCCHHHHTTTCBCTTCEEEEEEE
T ss_pred ccccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccc--cCCCccCCCCcccccCCCccCCCCeEEEEEE
Confidence 3445678 589999999999999999999999999999999996654 666554 33 799999999999999
Q ss_pred ECCC---------ccceeEeeCccc--cc-ccceeeEEEeCCCCCCC-CC-CCCCCceeeeeeccccCChHHHHHHhhhc
Q 047497 123 IVGQ---------RGTLWWHAHLSW--LR-STLYGPIIILPKRGIPY-PF-TKPYKEVPIIFGEWFKADPETIISQALQT 188 (580)
Q Consensus 123 ~~~~---------~Gt~wYH~H~~~--~~-~Gl~G~liV~~~~~~~~-~~-~~~d~e~~l~~~d~~~~~~~~~~~~~~~~ 188 (580)
++++ +||||||||... +. +||+|+|||+++..... +. ...|+|++|+++||.... ..
T Consensus 126 ~~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~e~~l~~~d~d~~~---------~~ 196 (306)
T 1sdd_A 126 ISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVFDESK---------SW 196 (306)
T ss_dssp CCGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSCCCCCCBCCEEETTS---------SS
T ss_pred eCCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCcccceEEEEEEeccccc---------cc
Confidence 8544 379999999876 33 79999999998753111 11 135789999999974221 01
Q ss_pred CCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCC-CeEEEEEcCceeeEEecCCCcCCceEEeEEE
Q 047497 189 GGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALN-DELFFSIANHTLTVVEADAIYVKPFETETLL 267 (580)
Q Consensus 189 ~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~l~ 267 (580)
....++.++|||+.+. ..+.+++++|++|||||+|++.. ..+.|||+||.|++ || ..+|++.
T Consensus 197 --~~~~~~~~~ING~~~~-------~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dtv~ 259 (306)
T 1sdd_A 197 --NQTSSLMYTVNGYVNG-------TMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISAIT 259 (306)
T ss_dssp --SCCCCEEECSSSCCSS-------CCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSCCC
T ss_pred --ccCCCcceeeCCEecC-------CCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcceEE
Confidence 1123578999999752 24679999999999999999987 56789999999985 77 4689999
Q ss_pred eCCCceEEEEEEcCCCCCCceEEEEeccc
Q 047497 268 IAPGQTTNVLLKTKPHYPSATFFMKARPY 296 (580)
Q Consensus 268 l~pGeR~dv~v~~~~~~~~g~y~i~~~~~ 296 (580)
|.||||+||+++++++ |.|+++|+..
T Consensus 260 l~pger~~v~~~~~~p---G~~~~hch~~ 285 (306)
T 1sdd_A 260 LVSATSTTANMTVSPE---GRWTIASLIP 285 (306)
T ss_dssp EETTCCBC-----------CCCCCBCCST
T ss_pred ECCCcEEEEEEEcCCC---eEEEEEeCCh
Confidence 9999999999999987 9999999964
No 36
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=2.6e-38 Score=338.65 Aligned_cols=259 Identities=20% Similarity=0.273 Sum_probs=210.2
Q ss_pred ceeEEEEEEEEEEeeec-CCceeEEEEECCCCCCcEEEEecCCEEEEEEEecCC--CCceEEecCCccCCCCCCCCCCCc
Q 047497 30 GVTRHYKFDIKLQNVTR-LCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQ--NNISIHWHGIRQLRSGWADGPAYI 106 (580)
Q Consensus 30 ~~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~--~~~~iH~HG~~~~~~~~~DGv~~~ 106 (580)
+..+.|+|++.+....+ +|....+|+|||++|||+|++++||+++|+|.|.+. ..++|||||+.. +||++..
T Consensus 161 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~~-----~DG~~~~ 235 (447)
T 2dv6_A 161 AKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAAF 235 (447)
T ss_dssp CCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGGG
T ss_pred CcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeeccccC-----CCCCCcc
Confidence 45678888887776666 588899999999999999999999999999999985 578999999852 7998865
Q ss_pred cccccCCCCeEEEEEEECCCccceeEeeCcc---ccc-ccceeeEEEeCCCCCCCCCCCCCCceeeeeeccccCChHHH-
Q 047497 107 TQCPIQTGQSYVYNFTIVGQRGTLWWHAHLS---WLR-STLYGPIIILPKRGIPYPFTKPYKEVPIIFGEWFKADPETI- 181 (580)
Q Consensus 107 tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~---~~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~~~~- 181 (580)
++ |.||++++|.|++ +++||||||||.+ .+. .||+|+|+|+++.. ++..|+|++++++||+.......
T Consensus 236 ~~--i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~----~P~~d~~~~~~~~~~~~~~~~~~~ 308 (447)
T 2dv6_A 236 TQ--TDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG----LPQVDREFYVMQGEIYTVKSFGTS 308 (447)
T ss_dssp CC--BCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC----SCCCSEEEEEEEEEECBSSCTTCC
T ss_pred EE--eCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC----CCCCCeeEEEEecccccCCccccc
Confidence 54 9999999999997 7899999999974 233 79999999998753 23468899999999987532100
Q ss_pred ------HHHhhhcCCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEecCC
Q 047497 182 ------ISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADA 255 (580)
Q Consensus 182 ------~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG 255 (580)
.... .+ ..++.++|||+.+++. ....+++++|++|||||+|++....+.|||+||.|+||+.||
T Consensus 309 g~~~~~~~~~--~~---~~~~~~~iNG~~~~~~-----~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG 378 (447)
T 2dv6_A 309 GEQEMDYEKL--IN---EKPEYFLFNGSVGSLT-----RSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLG 378 (447)
T ss_dssp EECCBBHHHH--HT---TCCSEEEETTSTTCCC-----CCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGG
T ss_pred ccccCChHHh--hc---cCCCEEEECCcccCCC-----CCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCC
Confidence 0111 11 2357899999987532 124799999999999999999888899999999999999999
Q ss_pred CcCCce--EEeEEEeCCCceEEEEEEcCCCCCCceEEEEeccccCCCCCCCCcceEEEEEEecCC
Q 047497 256 IYVKPF--ETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPL 318 (580)
Q Consensus 256 ~~v~P~--~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 318 (580)
.+++|. .+|++.|.||||++|+++++++ |.|+|+|+..... ..+..++++|++..
T Consensus 379 ~~~~~p~~~~dtv~l~pg~r~~i~~~~~~p---G~~~~hch~~~h~-----~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 379 SVVSPPLIGVQTVSVPPGGATIVDFKIDRA---GRYILVDHALSRL-----EHGLVGFLNVDGPK 435 (447)
T ss_dssp CSSSCCEEEESEEEECTTEEEEEEEECCSC---EEEEEEESSGGGG-----GGTCCEEEEECSCS
T ss_pred cccCCCcccccEEEECCCcEEEEEEECCCC---EEEEEEecCcCcc-----ccCCEEEEEEeCCC
Confidence 998644 5899999999999999999987 9999999965432 23557899998654
No 37
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=5.2e-40 Score=368.40 Aligned_cols=250 Identities=14% Similarity=0.113 Sum_probs=196.7
Q ss_pred cccceeEEEEEEEEEEee--ecCCc---------------eeEE--EEE-----CC-----------CCCCcEEEEecCC
Q 047497 27 PALGVTRHYKFDIKLQNV--TRLCN---------------TKSI--ISV-----NG-----------KFPGPRIVAREGD 71 (580)
Q Consensus 27 ~~~~~~~~~~l~~~~~~~--~~~g~---------------~~~~--~~~-----Ng-----------~~pgP~i~v~~Gd 71 (580)
...+.+|+|.|.+++..+ ++++. .+.+ +.| ++ ++|||+||+++||
T Consensus 128 ~~~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD 207 (770)
T 2r7e_B 128 SFQKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVED 207 (770)
T ss_dssp CCCCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSS
T ss_pred cCCCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCC
Confidence 356899999999999875 44542 1222 223 33 6899999999999
Q ss_pred EEEEEEEecCCCCceEEecCCccCCCCCCCCCCCccccccCCCCeEEEEEEECC---------CccceeEeeCcccc--c
Q 047497 72 QLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNFTIVG---------QRGTLWWHAHLSWL--R 140 (580)
Q Consensus 72 ~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~f~~~~---------~~Gt~wYH~H~~~~--~ 140 (580)
+|+|+|+|.++++++|||||++++.... ||+++ +||+|+||++|+|+|++++ ++||||||||.+.+ .
T Consensus 208 ~v~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~ 285 (770)
T 2r7e_B 208 NIMVTFRNQASRPYSFYSSLISYEEDQR-QGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDV 285 (770)
T ss_dssp CEEEEEECCSSSCCCCCBTTCCCCCCSS-SCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHH
T ss_pred EEEEEEEECCCCCcceeecccccccccC-CCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHH
Confidence 9999999999999999999999998842 69998 9999999999999999854 89999999999874 3
Q ss_pred -ccceeeEEEeCCCCCCC--CCCCCCCceeeeeec------cccCChHHHHHHhhh-cC-------CCCCCCCeEEEcCC
Q 047497 141 -STLYGPIIILPKRGIPY--PFTKPYKEVPIIFGE------WFKADPETIISQALQ-TG-------GGPNVSDAYTINGL 203 (580)
Q Consensus 141 -~Gl~G~liV~~~~~~~~--~~~~~d~e~~l~~~d------~~~~~~~~~~~~~~~-~~-------~~~~~~~~~liNG~ 203 (580)
+||+|+|||+++..... .....++|++|++++ ||.+..... +.. .. ......+.++|||+
T Consensus 286 ~~GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~~---~~~~p~~~~~~d~~~~~~~~~~~ING~ 362 (770)
T 2r7e_B 286 HSGLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENMER---NCRAPCNIQMEDPTFKENYRFHAINGY 362 (770)
T ss_dssp HTSCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGGSS---CSCCSSCCCSSSSSSTTTSCEECTTSC
T ss_pred hCCceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccchhh---cccCccccccCCccccccCCccccCCc
Confidence 89999999999864221 112357899988743 554422110 000 00 00112456899999
Q ss_pred CCCCCCCCCCceeEEEEeCCCEEEEEEEecCCC-CeEEEEEcCceeeEEecCCCcCCceEEeEEEeCCCceEEEEEEcCC
Q 047497 204 PGPLYNCSAKDTFKLKVKPGKTYLLRLINAALN-DELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTKP 282 (580)
Q Consensus 204 ~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~ 282 (580)
... ..+.+++++|++|||||+|++.. ..+.||||||.|+|++.||. .+|++.|.||||++|+|++++
T Consensus 363 ~~~-------~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad~ 430 (770)
T 2r7e_B 363 IMD-------TLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPSK 430 (770)
T ss_dssp TTT-------TCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCSS
T ss_pred cCC-------CCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeCC
Confidence 742 34678999999999999999865 37899999999999999973 899999999999999999998
Q ss_pred CCCCceEEEEeccc
Q 047497 283 HYPSATFFMKARPY 296 (580)
Q Consensus 283 ~~~~g~y~i~~~~~ 296 (580)
+ |.|.++|+..
T Consensus 431 p---G~w~~hcH~~ 441 (770)
T 2r7e_B 431 A---GIWRVECLIG 441 (770)
T ss_dssp C---BCCCBCCCSH
T ss_pred C---CceEEEeccc
Confidence 7 9999999963
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=5.9e-37 Score=343.26 Aligned_cols=217 Identities=21% Similarity=0.271 Sum_probs=169.3
Q ss_pred CCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCC-----CCCCccccccCCCCeEEEEEEECCCcc----
Q 047497 58 GKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWAD-----GPAYITQCPIQTGQSYVYNFTIVGQRG---- 128 (580)
Q Consensus 58 g~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~D-----Gv~~~tq~~i~PG~~~~Y~f~~~~~~G---- 128 (580)
..+|||+||+++||+|+|+|+|.++++++|||||+++. .+|+| |+++++||+|+||++|+|+|++++++|
T Consensus 447 ~g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~ 525 (742)
T 2r7e_A 447 SGILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKS 525 (742)
T ss_dssp SCSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSS
T ss_pred cCCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCccc
Confidence 36899999999999999999999999999999999985 45565 567788999999999999999866554
Q ss_pred -----ceeEeeCccccc---ccceeeEEEeCCCCCC-CC-CCCCCCceeeeeec------cccCChHHHHHHhhh-cC-C
Q 047497 129 -----TLWWHAHLSWLR---STLYGPIIILPKRGIP-YP-FTKPYKEVPIIFGE------WFKADPETIISQALQ-TG-G 190 (580)
Q Consensus 129 -----t~wYH~H~~~~~---~Gl~G~liV~~~~~~~-~~-~~~~d~e~~l~~~d------~~~~~~~~~~~~~~~-~~-~ 190 (580)
|||||||.+.+. +||+|+|||+++.... .. ....|+|++|++++ |+...... .+.. .. .
T Consensus 526 d~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~~~~---~~~~~p~~v 602 (742)
T 2r7e_A 526 DPRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTENIQ---RFLPNPAGV 602 (742)
T ss_dssp SCSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHHHHH---HHSSSSSCS
T ss_pred CCCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeeccccccccccccchh---hcccCchhc
Confidence 999999998753 7999999999875311 11 12458899999964 44432111 1110 00 0
Q ss_pred C------CCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCC-CeEEEEEcCceeeEEecCCCcCCceEE
Q 047497 191 G------PNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALN-DELFFSIANHTLTVVEADAIYVKPFET 263 (580)
Q Consensus 191 ~------~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~ 263 (580)
. ......++|||+.+. + . .+.+++|++|||||+|+++. ..+.|||+||+|+|+ +..+
T Consensus 603 ~~~~~~~~~~~~~~~ING~~~~----~---~-~l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~~ 666 (742)
T 2r7e_A 603 QLEDPEFQASNIMHSINGYVFD----S---L-QLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVYE 666 (742)
T ss_dssp CCCCHHHHGGGCCBCTTTTCSS----C---C-CCCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSSB
T ss_pred ccccccccccCceeeecCcCCC----C---C-cEEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------ccce
Confidence 0 001135789999742 1 1 38999999999999998764 468899999999987 5788
Q ss_pred eEEEeCCCceEEEEEEcCCCCCCceEEEEecccc
Q 047497 264 ETLLIAPGQTTNVLLKTKPHYPSATFFMKARPYV 297 (580)
Q Consensus 264 d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~ 297 (580)
|++.|.||||++|+|+++++ |.|+++|+...
T Consensus 667 Dtv~l~Pg~~~~v~~~ad~p---G~w~~hcH~~~ 697 (742)
T 2r7e_A 667 DTLTLFPFSGETVFMSMENP---GLWILGCHNSD 697 (742)
T ss_dssp CSSCCCCCSSEECCEECCCC---CCSCCEECCCS
T ss_pred eEEEECCCcEEEEEEEcCCC---eEEEEEeCCch
Confidence 99999999999999999987 99999999653
No 39
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.95 E-value=3.3e-28 Score=244.23 Aligned_cols=234 Identities=17% Similarity=0.152 Sum_probs=162.4
Q ss_pred CCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEecCCCcCCceEEeEEEeCCCceE
Q 047497 195 SDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTT 274 (580)
Q Consensus 195 ~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~ 274 (580)
...+++||+. ..|.|+++.|+++++|+.|... ..+.+|+||.. ..+.||.+.. +...|.||+++
T Consensus 54 ~~~~~~ng~~---------pgP~i~~~~Gd~v~v~~~N~~~-~~~~iH~HG~~--~~~~DG~p~~----~~~~i~PG~~~ 117 (288)
T 3gdc_A 54 FKGWSYNGRI---------PGPTLWAREGDALRIHFTNAGA-HPHTIHFHGVH--RATMDGTPGI----GAGSIAPGQSF 117 (288)
T ss_dssp EEEEEETTBS---------SCCEEEEETTCEEEEEEEECSS-SCBCCEESSCC--CGGGSCCTTS----TTCSBCTTCEE
T ss_pred EEEEEECCcc---------CCCcEEEeCCCEEEEEEEeCCC-CcccEEecccc--ccccCCCCCc----cceeECCCCEE
Confidence 3678999985 3489999999999999999985 45679999975 4578998542 33568999999
Q ss_pred EEEEEcCCCCCCceEEEEeccccCCCCCCCCcceEEEEEEecCCCCcccCCCCCCCCCcCCCCCCCCCcccccccccccc
Q 047497 275 NVLLKTKPHYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALNDTSFATSFTNKLR 354 (580)
Q Consensus 275 dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~ 354 (580)
+..++++++ |.||.+|+........ ..+..+.+.++.... .+
T Consensus 118 ~y~f~~~~~---Gt~~yH~H~~~~~~~~--~~Gl~G~liV~~~~~-----------------~~---------------- 159 (288)
T 3gdc_A 118 TYEFDATPF---GTHLYHCHQSPLAPHI--AKGLYGGFIVEPKEG-----------------RP---------------- 159 (288)
T ss_dssp EEEEECCSC---EEEEEECCCSSHHHHH--HTTCEEEEEEECSSC-----------------CC----------------
T ss_pred EEEEEcCCC---ccEEEEecCcchHHHH--hCcCeEEEEEeCCcc-----------------CC----------------
Confidence 999999766 9999999963100000 112333444432110 00
Q ss_pred cccCCCCCCCCCCCccceEEEEec-cCcccCCCCCcccCCCCCeeeeeecceeeecCchhhhhhhhcCCccCccCCCCCC
Q 047497 355 SLASTQFPANVPQNVDRRFFFTVG-LGTSPCQSNQTCQGPNGTMFQASVNNISFVMPTTALLQAHFTGKSYGVYNPDFPT 433 (580)
Q Consensus 355 ~l~~~~~p~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~~~~~~~~ 433 (580)
..++++.+.+. +... + + ...-.|++||..|..
T Consensus 160 -------------~~d~e~~l~~~d~~~~-----~---g--~~~~~~~iNG~~~~~------------------------ 192 (288)
T 3gdc_A 160 -------------PADDEMVMVMNGYNTD-----G---G--DDNEFYSVNGLPFHF------------------------ 192 (288)
T ss_dssp -------------CCSEEEEEEEEEECCS-----S---T--TCCSEEEETTSTTHH------------------------
T ss_pred -------------CCcceEEEEEeeEecC-----C---C--CCcceEEECcccccc------------------------
Confidence 01222222221 1000 0 0 001236777755410
Q ss_pred CCCeecccCCCCCCCccccCCceEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCC
Q 047497 434 SPLIAFNYTGTPPNNTMVSNGTKLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVD 513 (580)
Q Consensus 434 ~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~ 513 (580)
....+.++.|++|+|.+.|.+. ..+.|||||||+.|+|++.+. .+..
T Consensus 193 --------------------~~~~l~v~~Ge~vr~~l~N~g~-~~~~H~fHlhG~~f~v~~~g~------------~~~~ 239 (288)
T 3gdc_A 193 --------------------MDFPVKVKQHELVRIHLINVLE-YDPINSFHIHGNFFHYYPTGT------------MLTP 239 (288)
T ss_dssp --------------------HHSCEEEETTCCEEEEEEECCC-SSSEEEEEETTCCEEEEETTC------------CSSC
T ss_pred --------------------cCcccccCCCCEEEEEEEeCCC-CCcceeEEEcCCEEEEEcCCC------------ccCC
Confidence 0113577899999999999752 124699999999999987542 1234
Q ss_pred CCccceEeeCCCcEEEEEEEecCceeEEEEeechhhhhccceEEEEEec
Q 047497 514 PVERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVLD 562 (580)
Q Consensus 514 p~~rDTv~vp~g~~v~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~~ 562 (580)
+.++||+.|+||+++.|+|++++||.|+||||+++|++.|||+.|+|.+
T Consensus 240 ~~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 240 SEYTDTISQVQGQRGILELRFPYPGKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp SEEESEEEEETTCEEEEEECCCSCEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred CceeeEEEeCCCceEEEEEECCCCEEEEEEecChHHHhcCCCEEEEEeC
Confidence 5799999999999999999999999999999999999999999999863
No 40
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.95 E-value=7.2e-28 Score=247.16 Aligned_cols=218 Identities=15% Similarity=0.172 Sum_probs=152.9
Q ss_pred ceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEecCCCcCCceEEeEEEeCCCceEEEEEEcCCCC---------
Q 047497 214 DTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTKPHY--------- 284 (580)
Q Consensus 214 ~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~--------- 284 (580)
..|+|++++|+++|+||+|.... .+.+|.||..+. .+.||.++ +...|.|||+++..++++++.
T Consensus 75 pGP~I~v~~Gd~v~v~~~N~l~~-~~sih~HG~~~~-~~~DG~~~-----t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~ 147 (343)
T 3cg8_A 75 PGPLIEVNEGDTLHIEFTNTMDV-RASLHVHGLDYE-ISSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRP 147 (343)
T ss_dssp SCCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEEC
T ss_pred cCCEEEEECCCEEEEEEEECCCC-CeeEEecCcccC-CcCCCccc-----ccccccCCCEEEEEEEeCCCCcccccccCC
Confidence 44899999999999999999954 455999998877 78999874 234688999999999987641
Q ss_pred -CCceEEEEeccccCCC---CCCCCcceEEEEEEecCCCCcccCCCCCCCCCcCCCCCCCCCcccccccccccccccCCC
Q 047497 285 -PSATFFMKARPYVTGQ---GTFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALNDTSFATSFTNKLRSLASTQ 360 (580)
Q Consensus 285 -~~g~y~i~~~~~~~~~---~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~ 360 (580)
..|.||.+++...... .....+.+..+++.. .. +
T Consensus 148 ~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~--~~---------------~------------------------- 185 (343)
T 3cg8_A 148 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRK--GD---------------V------------------------- 185 (343)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECT--TC---------------C-------------------------
T ss_pred CCceEEEEecCccccccchhhhhcCCeEEEEEecC--CC---------------C-------------------------
Confidence 1277888887421100 000112222222111 00 0
Q ss_pred CCCCCCCCccceEEEEeccCcccCCCCCcccCCCCCeeeeeecceeeecCchhhhhhhhcCCccCccCCCCCCCCCeecc
Q 047497 361 FPANVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQASVNNISFVMPTTALLQAHFTGKSYGVYNPDFPTSPLIAFN 440 (580)
Q Consensus 361 ~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~ 440 (580)
..|+++.+.+. .|.+||..+ +
T Consensus 186 -------~pd~e~~l~~~--------------------d~~iNG~~~------------------------~-------- 206 (343)
T 3cg8_A 186 -------LPDATHTIVFN--------------------DMTINNRKP------------------------H-------- 206 (343)
T ss_dssp -------CCSEEEEEEEE--------------------TTEETTCCT------------------------T--------
T ss_pred -------CCCceEEEEcc--------------------cceecccCC------------------------C--------
Confidence 01233433321 146776542 0
Q ss_pred cCCCCCCCccccCCceEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceE
Q 047497 441 YTGTPPNNTMVSNGTKLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTV 520 (580)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv 520 (580)
..+.+.++.|++|+|+|.|.+ .+.||||||||.|+|+.. |.+.. ....+.++||+
T Consensus 207 -------------~~~~l~v~~Ge~vri~l~N~g---~~~HpfHlHGh~f~v~~~--G~~~~-------p~~~~~~~Dtv 261 (343)
T 3cg8_A 207 -------------TGPDFEATVGDRVEIVMITHG---EYYHTFHMHGHRWADNRT--GILTG-------PDDPSRVIDNK 261 (343)
T ss_dssp -------------CCCCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSSS--SSCCS-------TTCCCCEESEE
T ss_pred -------------CCccEEeCCCCEEEEEEEcCC---ccccccEecCcEEEEecc--CcccC-------CCCcccceeeE
Confidence 122478889999999999975 389999999999999743 32211 11235689999
Q ss_pred eeCCCcEEEEEEEe---cCceeEEEEeechhhhhccceEEEEEecCC
Q 047497 521 GVPSGGWVAIRFLA---DNPGVWFMHCHLEVHTSWGLKMAWIVLDGK 564 (580)
Q Consensus 521 ~vp~g~~v~irf~a---dnpG~wl~HCHil~H~d~GM~~~~~V~~~~ 564 (580)
.|+||+++.|+|++ +|||.|+||||+++|++.|||++|.|.+.+
T Consensus 262 ~v~PG~~~~v~~~~~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~ 308 (343)
T 3cg8_A 262 ITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPD 308 (343)
T ss_dssp EECTTCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred EeCCCCEEEEEEEECCCCCCeeEEEeCCCHHHHhccCcEEEEEecCC
Confidence 99999999999995 899999999999999999999999997643
No 41
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.95 E-value=5.2e-27 Score=238.42 Aligned_cols=247 Identities=19% Similarity=0.223 Sum_probs=162.1
Q ss_pred CeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceee-EEecCCCcCCceEEeEEEeCCCceE
Q 047497 196 DAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLT-VVEADAIYVKPFETETLLIAPGQTT 274 (580)
Q Consensus 196 ~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~-via~DG~~v~P~~~d~l~l~pGeR~ 274 (580)
..+++||+. ..|+|+++.|+++++|+.|... ....+|+||.... ..+.||.+. +....|.||+++
T Consensus 23 ~~~~~ng~~---------pGP~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~ 88 (318)
T 3g5w_A 23 HTFAFNGQV---------PAPLIHVMEGDDVTVNVTNMTT-LPHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTF 88 (318)
T ss_dssp EEEEETTBS---------SCCEEEEETTCEEEEEEEECSS-SCBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEE
T ss_pred EEEEECCcc---------CCceEEEeCCCEEEEEEEeCCC-CceeEEecCcCCCCCcccCCCcc----cccccCCCCCEE
Confidence 578999985 3489999999999999999984 5577999997654 347899754 123478999999
Q ss_pred EEEEEcCCCCCCceEEEEeccccCCCCCCCCcceEEEEEEecCCCCcccCCCCCCCCCcCCCCCCCCCcccccccccccc
Q 047497 275 NVLLKTKPHYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALNDTSFATSFTNKLR 354 (580)
Q Consensus 275 dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~ 354 (580)
+..++++++ |+||.+++.......... +..+.|.++.... ... +.
T Consensus 89 ~y~f~~~~~---Gt~wYH~H~~~~~~~~~~--Gl~G~lIV~~~~~-----------~~~----~~--------------- 133 (318)
T 3g5w_A 89 TYKFKAEPA---GTMWYHCHVNVNEHVTMR--GMWGPLIVEPKNP-----------LPI----EK--------------- 133 (318)
T ss_dssp EEEEECCSC---EEEEEECCSSHHHHHHHS--CCEEEEEEECSSC-----------CHH----HH---------------
T ss_pred EEEEEcCCC---EEEEEEccCChhhhhccC--CCEEEEEEcCCCc-----------ccc----cc---------------
Confidence 999999876 999999995211000001 2233333332210 000 00
Q ss_pred cccCCCCCCCCCCCccceEEEEec-cCcccCCCCCcccCCCCCeeeeeecceeeecCchhhhhhhhcCCccCccCCCCCC
Q 047497 355 SLASTQFPANVPQNVDRRFFFTVG-LGTSPCQSNQTCQGPNGTMFQASVNNISFVMPTTALLQAHFTGKSYGVYNPDFPT 433 (580)
Q Consensus 355 ~l~~~~~p~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~~~~~~~~ 433 (580)
..++.+.+.+. ..............+....-.|.+||..| |
T Consensus 134 -------------~~d~e~~l~l~dw~~~~~~~~~~~~~~~~~~d~~~ING~~~--~----------------------- 175 (318)
T 3g5w_A 134 -------------TVTKDYILMLSDWVSSWANKPGEGGIPGDVFDYYTINAKSF--P----------------------- 175 (318)
T ss_dssp -------------TCCEEEEEEEEEECGGGTTCTTCCCCTTCCCCEEEETTBCB--T-----------------------
T ss_pred -------------cccceeEEEEEeeccccccccccCCCCCCcCcEEEEcCcCC--C-----------------------
Confidence 00111111100 00000000000000000011356776543 0
Q ss_pred CCCeecccCCCCCCCccccCCceEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCC
Q 047497 434 SPLIAFNYTGTPPNNTMVSNGTKLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVD 513 (580)
Q Consensus 434 ~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~ 513 (580)
.+..+.++.|++++|+|.|.+. ..||||||||.|+|++.+.+ .+.+
T Consensus 176 --------------------~~~~l~v~~G~~vrlrliN~~~---~~h~~hlhGh~f~vi~~dG~-----------~~~~ 221 (318)
T 3g5w_A 176 --------------------ETQPIRVKKGDVIRLRLIGAGD---HVHAIHTHGHISQIAFKDGF-----------PLDK 221 (318)
T ss_dssp --------------------SSCCEEECTTCEEEEEEEECSS---SCEEEEETTSCEEEEEETTE-----------EEEE
T ss_pred --------------------CCccEEeCCCCEEEEEEEeCCC---ceEEEEECCcEEEEEecCCc-----------ccCC
Confidence 1223678899999999999753 68999999999999998522 1235
Q ss_pred CCccceEeeCCCcEEEEEEEecCceeEEEEeechhhhh------ccceEEEEEecC
Q 047497 514 PVERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTS------WGLKMAWIVLDG 563 (580)
Q Consensus 514 p~~rDTv~vp~g~~v~irf~adnpG~wl~HCHil~H~d------~GM~~~~~V~~~ 563 (580)
|.++||+.|+||+++.|+|+++|||.|+||||+++|++ .|||.+++|...
T Consensus 222 p~~~dtv~l~pger~~v~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~ 277 (318)
T 3g5w_A 222 PIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEV 277 (318)
T ss_dssp EEEESEEEECTTCEEEEEEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTT
T ss_pred CccccEEEECCCCEEEEEEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECCC
Confidence 67899999999999999999999999999999999998 689999998653
No 42
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.94 E-value=9.8e-27 Score=238.98 Aligned_cols=243 Identities=17% Similarity=0.167 Sum_probs=157.1
Q ss_pred CCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEe---cCCCcCCceEEeEEEeCCC
Q 047497 195 SDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVE---ADAIYVKPFETETLLIAPG 271 (580)
Q Consensus 195 ~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via---~DG~~v~P~~~d~l~l~pG 271 (580)
...+++||+. ..|+|++++|+++|+||+|.... ...+|.|| +.+.+ .||.+. +....|.||
T Consensus 23 ~~~~~~NG~~---------pGP~I~v~~Gd~v~v~v~N~l~~-~~siH~HG--~~~~~~~~~DGvp~----vtq~~I~PG 86 (339)
T 2zwn_A 23 YKVFGFNGQV---------PGPLIHVQEGDDVIVNVTNNTSL-PHTIHWHG--VHQKGTWRSDGVPG----VTQQPIEAG 86 (339)
T ss_dssp EEEEEETTBS---------SCCEEEEETTCEEEEEEEEESSS-CBCCEEET--CCCTTCGGGSCCBT----TTBCCBCTT
T ss_pred EEEEEECCcc---------CCCeEEEECCCEEEEEEEECCCC-CccEEeCC--CCcCCCcccCCCCc----cccCccCCC
Confidence 3678999984 34899999999999999999854 34455555 55555 499853 234569999
Q ss_pred ceEEEEEEcCCCCCCceEEEEeccccCCCCCCCCcceEEEEEEecCCCCcccCCCCCCCCCcCCCCCCCCCccccccccc
Q 047497 272 QTTNVLLKTKPHYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALNDTSFATSFTN 351 (580)
Q Consensus 272 eR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~ 351 (580)
||+++.+++++. |+||++++...... ....+..+.+...... . ..+ + .
T Consensus 87 ~~~~y~f~~~~~---Gt~wyH~H~~~~~q--~~~~Gl~G~liV~p~~---------~--~~~-~---~------------ 134 (339)
T 2zwn_A 87 DSYTYKFKADRI---GTLWYHCHVNVNEH--VGVRGMWGPLIVDPKQ---------P--LPI-E---K------------ 134 (339)
T ss_dssp CEEEEEEECCSC---EEEEEECCSSHHHH--TTTSCCEEEEEEECSS---------C--CTT-G---G------------
T ss_pred CeEEEEEECCCC---EEEEEEecCCchhh--hhcCCceEeEEecCCC---------c--ccc-c---c------------
Confidence 999999999865 99999998532110 0101222233332211 0 000 0 0
Q ss_pred ccccccCCCCCCCCCCCccceEEEEec-cCcccCCCCCcc-cCCCC-CeeeeeecceeeecCchhhhhhhhcCCccCccC
Q 047497 352 KLRSLASTQFPANVPQNVDRRFFFTVG-LGTSPCQSNQTC-QGPNG-TMFQASVNNISFVMPTTALLQAHFTGKSYGVYN 428 (580)
Q Consensus 352 ~l~~l~~~~~p~~~p~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~-~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~~~ 428 (580)
..++.+.+.+. ...... .... .+... ..-.|.+||..+
T Consensus 135 ----------------~~d~e~~l~l~d~~~~~~--~~~~~~g~~~~~~~~~~ING~~~--------------------- 175 (339)
T 2zwn_A 135 ----------------RVTKDVIMMMSTWESAVA--DKYGEGGTPMNVADYFSVNAKSF--------------------- 175 (339)
T ss_dssp ----------------GCSEEEEEEEEEECGGGT--TCTTCCCSTTSCCCEEEETTBCT---------------------
T ss_pred ----------------cCCceEEEEeeheecccc--cccCCCCCCccccceEEEccccC---------------------
Confidence 00111111100 000000 0000 00000 011245665432
Q ss_pred CCCCCCCCeecccCCCCCCCccccCCceEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCC
Q 047497 429 PDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTK 508 (580)
Q Consensus 429 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~ 508 (580)
.....+.++.|++++|+|.|.+ ...||||||||+|+|++.+..
T Consensus 176 ------------------------~~~~~~~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~DG~---------- 218 (339)
T 2zwn_A 176 ------------------------PLTQPLRVKKGDVVKIRFFGAG---GGIHAMHSHGHDMLVTHKDGL---------- 218 (339)
T ss_dssp ------------------------TSSCCEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEETTE----------
T ss_pred ------------------------CCcccEEECCCCEEEEEEEeCC---CceEEEEECCcEEEEEEeCCe----------
Confidence 0122467889999999999975 369999999999999998522
Q ss_pred CCCCCCCccceEeeCCCcEEEEEEEecCceeEEEEeechhh------hhccceEEEEEec
Q 047497 509 FNLVDPVERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVH------TSWGLKMAWIVLD 562 (580)
Q Consensus 509 ~~~~~p~~rDTv~vp~g~~v~irf~adnpG~wl~HCHil~H------~d~GM~~~~~V~~ 562 (580)
.+.+|.++||+.|++|+++.|+|++|+||.|++|||+++| ++.||+.++.|..
T Consensus 219 -~~~~p~~~dtv~l~pg~r~~v~~~~~~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g 277 (339)
T 2zwn_A 219 -PLDSPYYADTVLVSPGERYDVIIEADNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDG 277 (339)
T ss_dssp -EEEEEEEESEEEECTTCEEEEEEECCSCSEEEEEECCGGGSCBTTBSSCSSEEEEEETT
T ss_pred -ecCCCcEEEEEEECCCCEEEEEEEeCCCeeEEEEEechhhcccccccCCCcEEEEEECC
Confidence 1223678999999999999999999999999999999999 8899999999864
No 43
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.94 E-value=3.8e-26 Score=227.84 Aligned_cols=220 Identities=14% Similarity=0.173 Sum_probs=154.8
Q ss_pred ceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEecCCCcCCceEEeEEEeCCCceEEEEEEcCCC----------
Q 047497 214 DTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTKPH---------- 283 (580)
Q Consensus 214 ~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~---------- 283 (580)
..|+|+++.|+++++++.|.. .....+|.||..+.- +.||.++ ..-.|.||+++...++++++
T Consensus 34 pGP~i~~~~Gd~v~v~~~N~~-~~~~siH~HG~~~~~-~~DG~~~-----t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~ 106 (276)
T 3kw8_A 34 PGPLIEVNEGDTLHIEFTNTM-DVRASLHVHGLDYEI-SSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRP 106 (276)
T ss_dssp SCCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCCG-GGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECC-CCCccEeecCcccCC-ccCCCcC-----CcCCCCCCCEEEEEEEcCCccccccCccCC
Confidence 458999999999999999997 566789999987654 6899862 23458999999999999763
Q ss_pred CCCceEEEEeccccCCC-CCCCCcceEEEEEEecCCCCcccCCCCCCCCCcCCCCCCCCCcccccccccccccccCCCCC
Q 047497 284 YPSATFFMKARPYVTGQ-GTFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALNDTSFATSFTNKLRSLASTQFP 362 (580)
Q Consensus 284 ~~~g~y~i~~~~~~~~~-~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p 362 (580)
...|.||.+++...... ......+..+.|....... .
T Consensus 107 ~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~-------------~----------------------------- 144 (276)
T 3kw8_A 107 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD-------------V----------------------------- 144 (276)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC-------------C-----------------------------
T ss_pred CCCEEEEEecCccccccchhhhhCccEEEEEEecCCC-------------c-----------------------------
Confidence 11288999998521100 0000012223333321110 0
Q ss_pred CCCCCCccceEEEEeccCcccCCCCCcccCCCCCeeeeeecceeeecCchhhhhhhhcCCccCccCCCCCCCCCeecccC
Q 047497 363 ANVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQASVNNISFVMPTTALLQAHFTGKSYGVYNPDFPTSPLIAFNYT 442 (580)
Q Consensus 363 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~ 442 (580)
..|+++.+.+. .|+|||..|.
T Consensus 145 -----~~drE~~l~l~--------------------~~~iNG~~~~---------------------------------- 165 (276)
T 3kw8_A 145 -----LPDATHTIVFN--------------------DMTINNRKPH---------------------------------- 165 (276)
T ss_dssp -----CCSEEEEEEEE--------------------TTEETTCCTT----------------------------------
T ss_pred -----ccccceEEEec--------------------ccccceeccc----------------------------------
Confidence 01344444321 1567875431
Q ss_pred CCCCCCccccCCceEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEee
Q 047497 443 GTPPNNTMVSNGTKLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGV 522 (580)
Q Consensus 443 ~~~~~~~~~~~~~~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v 522 (580)
....+.++.|++|+|+|.|.+ .+.|||||||+.|++++. |.++.. ...+.+|||+.|
T Consensus 166 -----------~~p~i~v~~G~~vri~l~N~~---~~~Hp~HlHG~~f~v~~~--G~~~~p-------~~~~~~~Dtv~v 222 (276)
T 3kw8_A 166 -----------TGPDFEATVGDRVEIVMITHG---EYYHTFHMHGHRWADNRT--GILTGP-------DDPSRVIDNKIT 222 (276)
T ss_dssp -----------CCCCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSSS--SSCCST-------TCCCCEESEEEE
T ss_pred -----------CCCCEEEecCCEEEEEEecCC---CcceeEEEccceeEEecc--CccCCC-------cccccCCccEEe
Confidence 123468889999999999975 379999999999999754 332211 122468999999
Q ss_pred CCCcEEEEEEEec---CceeEEEEeechhhhhccceEEEEEecCC
Q 047497 523 PSGGWVAIRFLAD---NPGVWFMHCHLEVHTSWGLKMAWIVLDGK 564 (580)
Q Consensus 523 p~g~~v~irf~ad---npG~wl~HCHil~H~d~GM~~~~~V~~~~ 564 (580)
+||+++.++|+++ |||.|+||||+++|++.|||+.|+|.+++
T Consensus 223 ~pg~~~~~~~~~~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~ 267 (276)
T 3kw8_A 223 GPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPD 267 (276)
T ss_dssp CTTCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred CCCceEEEEEEeccCCCCCeEEEECCCchHhhCCCeEEEEEeCCC
Confidence 9999999999997 89999999999999999999999998764
No 44
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.94 E-value=3.7e-26 Score=230.16 Aligned_cols=220 Identities=18% Similarity=0.238 Sum_probs=149.0
Q ss_pred ceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEecCCCcCCceEEeEEEeCCCceEEEEEEcCCC----------
Q 047497 214 DTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTKPH---------- 283 (580)
Q Consensus 214 ~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~---------- 283 (580)
+.|+|+++.|++++++|.|... ...++|.+|..+. -+.||.++.- -.|.|||++...++++.+
T Consensus 56 PGP~i~~~~GD~v~v~~~N~l~-~~~siH~HG~~~~-~~~DG~~~~~-----~~i~PG~t~~Y~~~~~~~~~~~~~~~~~ 128 (299)
T 3t9w_A 56 PGPVLEMWEGDTLEIDLVNTTD-RVLSLHPHGVDYD-VNSDGTLMNG-----SAVMPGQTRRYTWRSHVGYRRADGSWAE 128 (299)
T ss_dssp SCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCC-GGGSCCTTTT-----CCBCTTCEEEEEEBCCCCEECTTSCEEC
T ss_pred cCceEEEECCeEEEEEEEECCC-CCccEEeCCcccC-CccCCCcccc-----CccCCCCeEEEEEEeecccccCCCcCCC
Confidence 4589999999999999999974 5567999997655 3679976421 137899999998887632
Q ss_pred CCCceEEEEeccccCCCCCCC-CcceEEEEEEecCCCCcccCCCCCCCCCcCCCCCCCCCcccccccccccccccCCCCC
Q 047497 284 YPSATFFMKARPYVTGQGTFD-NSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALNDTSFATSFTNKLRSLASTQFP 362 (580)
Q Consensus 284 ~~~g~y~i~~~~~~~~~~~~~-~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p 362 (580)
...|.||.+++.........+ ..+..+.|...... .
T Consensus 129 ~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~----------------~--------------------------- 165 (299)
T 3t9w_A 129 GTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQG----------------D--------------------------- 165 (299)
T ss_dssp CCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT----------------C---------------------------
T ss_pred CCceeEEEecCCcccccchhhhcccccceEEEeccc----------------c---------------------------
Confidence 123999999885321110000 01222333222110 0
Q ss_pred CCCCCCccceEEEEeccCcccCCCCCcccCCCCCeeeeeecceeeecCchhhhhhhhcCCccCccCCCCCCCCCeecccC
Q 047497 363 ANVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQASVNNISFVMPTTALLQAHFTGKSYGVYNPDFPTSPLIAFNYT 442 (580)
Q Consensus 363 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~ 442 (580)
...|+++.+.++ .|.+|+..+ +
T Consensus 166 ----~~~d~e~~l~~~--------------------~~~~Ng~~~------------------------~---------- 187 (299)
T 3t9w_A 166 ----LLPKRQFTVVFN--------------------DMMINNRAH------------------------H---------- 187 (299)
T ss_dssp ----CCCSEEEEEEEE--------------------TTEETTCCT------------------------T----------
T ss_pred ----cCccccceeeee--------------------eeeecCccc------------------------c----------
Confidence 011344444332 144555332 1
Q ss_pred CCCCCCccccCCceEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEee
Q 047497 443 GTPPNNTMVSNGTKLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGV 522 (580)
Q Consensus 443 ~~~~~~~~~~~~~~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v 522 (580)
....+.++.|++|+|+|.|.+ .+.||||||||.|+|+..+... .....+.++||+.|
T Consensus 188 -----------~~p~l~v~~Ge~Vr~~liN~~---~~~HpfHlHGh~F~v~~~g~~~---------~~~~~~~~~Dtv~v 244 (299)
T 3t9w_A 188 -----------DAPTFEANLGERVEWIAIGHG---SNFHTFHLHGHRWLDNRTGMRT---------SEYDPSPLIDIKDL 244 (299)
T ss_dssp -----------CCCEEEEETTCEEEEEEEEES---SCCCEEEETTCCEESSSSSSCC---------STTCCCCEESEEEC
T ss_pred -----------ccccceecCCCEEEEEEEecc---ccceeeeEecceEEEEeccccc---------CCcCCCCceeeEEe
Confidence 123467889999999999975 3789999999999998775322 22234568999999
Q ss_pred CCCcEEEE---EEEecCceeEEEEeechhhhhccceEEEEEecCC
Q 047497 523 PSGGWVAI---RFLADNPGVWFMHCHLEVHTSWGLKMAWIVLDGK 564 (580)
Q Consensus 523 p~g~~v~i---rf~adnpG~wl~HCHil~H~d~GM~~~~~V~~~~ 564 (580)
.||....+ +|+++|||.|+|||||++|++.|||++|+|.+.+
T Consensus 245 ~PGe~~~~~via~~~dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~ 289 (299)
T 3t9w_A 245 NPGVSFGFQVIAGEGVGPGMWMYHCHVQNHSDMGMAGMFLVRNAD 289 (299)
T ss_dssp CTTCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred CCceeEEEEEEEeeCCCCeeEEEEcCCHHHHhcCCeEEEEEECCC
Confidence 99976554 4566899999999999999999999999998653
No 45
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.93 E-value=2.5e-25 Score=225.86 Aligned_cols=220 Identities=15% Similarity=0.163 Sum_probs=149.9
Q ss_pred ceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEecCCCcCCceEEeEEEeCCCceEEEEEEcCCC----------
Q 047497 214 DTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTKPH---------- 283 (580)
Q Consensus 214 ~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~---------- 283 (580)
+.|+|+++.|++++++|.|... ....+|.||..+. -+.||.+.. .-.|.||+++...+++..+
T Consensus 40 PGP~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~-~~~dG~~~~-----~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~ 112 (313)
T 3tas_A 40 PGPLIELNEGDTLHIEFENTMD-VPVSLHVHGLDYE-ISSDGTKQS-----RSDVEPGGTRTYTWRTHVPGRRADGTWRA 112 (313)
T ss_dssp SCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCC-GGGSCSTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECCC-CCccEeecCCcCC-ccCCCCccc-----cCCcCCCCEEEEEEEeccCCccccccccC
Confidence 4589999999999999999974 5567999997654 357997641 1137899999988877532
Q ss_pred CCCceEEEEeccccCCCCCC-CCcceEEEEEEecCCCCcccCCCCCCCCCcCCCCCCCCCcccccccccccccccCCCCC
Q 047497 284 YPSATFFMKARPYVTGQGTF-DNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALNDTSFATSFTNKLRSLASTQFP 362 (580)
Q Consensus 284 ~~~g~y~i~~~~~~~~~~~~-~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p 362 (580)
...|.||.+++......... -..+..+.|...... .
T Consensus 113 ~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~----------------~--------------------------- 149 (313)
T 3tas_A 113 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG----------------D--------------------------- 149 (313)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT----------------C---------------------------
T ss_pred CCceEEEEeecCcccccchhhhhccccCceEeeccc----------------c---------------------------
Confidence 12388999988522110000 001222333332111 0
Q ss_pred CCCCCCccceEEEEeccCcccCCCCCcccCCCCCeeeeeecceeeecCchhhhhhhhcCCccCccCCCCCCCCCeecccC
Q 047497 363 ANVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQASVNNISFVMPTTALLQAHFTGKSYGVYNPDFPTSPLIAFNYT 442 (580)
Q Consensus 363 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~ 442 (580)
...|+++.+.+. .|++|+..+ +
T Consensus 150 ----~~~d~e~~l~~~--------------------d~t~Ng~~~------------------------~---------- 171 (313)
T 3tas_A 150 ----VLPDRTHTIVFN--------------------DMTINNRPA------------------------H---------- 171 (313)
T ss_dssp ----BCCSEEEEEEEE--------------------TTEETTCCT------------------------T----------
T ss_pred ----ccccccceeecc--------------------chhcccCCc------------------------c----------
Confidence 011344444321 145665322 0
Q ss_pred CCCCCCccccCCceEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEee
Q 047497 443 GTPPNNTMVSNGTKLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGV 522 (580)
Q Consensus 443 ~~~~~~~~~~~~~~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v 522 (580)
..+.+.++.|++|+|+|.|.+ .+.||||||||.|+|+..+... .....+.++||+.|
T Consensus 172 -----------~~~~l~v~~Ge~vr~~liN~g---~~~hpfHlHGh~F~v~~~~~~~---------~~~~~~~~~Dtv~l 228 (313)
T 3tas_A 172 -----------TGPDFEATVGDRVEFVMITHG---EYYHTFHLHGHRWADNRTGMLT---------GPDDPSQVIDNKIC 228 (313)
T ss_dssp -----------CCCCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSTTSSCC---------STTCCCCEESEEEE
T ss_pred -----------cccccccccCCEEEEEEeccc---ccceeeeecCCeeEEEEECCcc---------CCCCCCeeeeEEEe
Confidence 112367789999999999975 4799999999999998765221 12234678999999
Q ss_pred CCCcEEEEEEEe---cCceeEEEEeechhhhhccceEEEEEecCC
Q 047497 523 PSGGWVAIRFLA---DNPGVWFMHCHLEVHTSWGLKMAWIVLDGK 564 (580)
Q Consensus 523 p~g~~v~irf~a---dnpG~wl~HCHil~H~d~GM~~~~~V~~~~ 564 (580)
.||+...+++.+ +|||.|+|||||++|++.|||+.|+|++.+
T Consensus 229 ~Pger~~v~v~a~~~~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d 273 (313)
T 3tas_A 229 GPADSFGFQVIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPD 273 (313)
T ss_dssp CTTCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred CCCcceEEEEEeccCCCCEeEEEEeCChHHHHCCCeEEEEEECCC
Confidence 999988877764 699999999999999999999999998764
No 46
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.87 E-value=2.5e-23 Score=210.55 Aligned_cols=239 Identities=13% Similarity=0.091 Sum_probs=134.5
Q ss_pred EEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEecCCCcCC----ceEEeEEEeCCCce
Q 047497 198 YTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVK----PFETETLLIAPGQT 273 (580)
Q Consensus 198 ~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~----P~~~d~l~l~pGeR 273 (580)
.++||.++ |+|++++|+++|+||.|.. ...+.+|.||..+. .+.||.+.. +..++...|.||||
T Consensus 52 ~~~n~~pG----------P~I~v~~Gd~v~v~~~N~l-~~~~siH~HGl~~~-~~~dG~~~~dg~~~~~~~~~~I~PG~~ 119 (306)
T 1sdd_A 52 SRTSGLLG----------PTLYAEVGDIMKVHFKNKA-HKPLSIHAQGIKYS-KFSEGASYSDHTLPMEKMDDAVAPGQE 119 (306)
T ss_dssp CSSCCSCC----------CCEEEETTCEEEEEEEECS-SSCBCCEEESSCCC-TTTSCCCSCCCCCHHHHTTTCBCTTCE
T ss_pred cccCCccC----------CEEEEeCCCEEEEEEEECC-CCcccEeecceecc-cccCCCccCCCCcccccCCCccCCCCe
Confidence 34777654 7899999999999999987 46678999988743 368998652 22333467999999
Q ss_pred EEEEEEcCCCC-------CCceEEEEeccccCCCCCCCCcceEEEEEEecCCCCcccCCCCCCCCCcCCCCCCCCCcccc
Q 047497 274 TNVLLKTKPHY-------PSATFFMKARPYVTGQGTFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALNDTSFA 346 (580)
Q Consensus 274 ~dv~v~~~~~~-------~~g~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~ 346 (580)
++..+++++.. ..|+||++++...... ....+.+ +++....... ... +..... +..
T Consensus 120 ~~Y~f~~~~~~gp~~~d~~~GT~wYHsH~~~~~q-~~~GL~G-~liV~~~~~~--------~~~----~~~~~~-d~e-- 182 (306)
T 1sdd_A 120 YTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVED-FNSGLIG-PLLICKKGTL--------TED----GTQKMF-EKQ-- 182 (306)
T ss_dssp EEEEEECCGGGSCCSSSCSEEEEEEECCSSSHHH-HHTTCCE-EEEEECTTCB--------CTT----SSBSSS-CCC--
T ss_pred EEEEEEeCCccCCCCCCCCceEEEEeccCCchhh-hccCceE-EEEEccCCCC--------Ccc----CCcCcc-cce--
Confidence 99999997752 2379999998421100 0112223 3443322110 000 000000 000
Q ss_pred cccccccccccCCCCCCCCCCCccceEEEEeccCcccCCCCCcccCCCCCeeeeeecceeeecCchhhhhhhhcCCccCc
Q 047497 347 TSFTNKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQASVNNISFVMPTTALLQAHFTGKSYGV 426 (580)
Q Consensus 347 ~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~ 426 (580)
+..-+.. +..... +.... .-.+.+||..+.
T Consensus 183 --~~l~~~d-------------------~d~~~~---------~~~~~--~~~~~ING~~~~------------------ 212 (306)
T 1sdd_A 183 --HVLMFAV-------------------FDESKS---------WNQTS--SLMYTVNGYVNG------------------ 212 (306)
T ss_dssp --CCCBCCE-------------------EETTSS---------SSCCC--CEEECSSSCCSS------------------
T ss_pred --EEEEEEe-------------------cccccc---------cccCC--CcceeeCCEecC------------------
Confidence 0000000 000000 00000 112456664430
Q ss_pred cCCCCCCCCCeecccCCCCCCCccccCCceEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCC
Q 047497 427 YNPDFPTSPLIAFNYTGTPPNNTMVSNGTKLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDP 506 (580)
Q Consensus 427 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~ 506 (580)
..+.+.++.|++++|.|.|.+. ....||||+|||.|++ .|
T Consensus 213 ---------------------------~~p~l~v~~G~~vrlrliN~g~-~~~~h~~hlhG~~~~~----dG-------- 252 (306)
T 1sdd_A 213 ---------------------------TMPDITVCAHDHISWHLIGMSS-GPELFSIHFNGQVLEQ----NH-------- 252 (306)
T ss_dssp ---------------------------CCCCCCCCCC------BBCCCS-SSCEECCBCSSTTCEE----TT--------
T ss_pred ---------------------------CCcceEEcCCCEEEEEEEeCCC-CCccEEEEECCcEeee----CC--------
Confidence 0112355679999999999753 2257999999999986 11
Q ss_pred CCCCCCCCCccceEeeCCCcEEEEEEEecCceeEEEEeechhhhhccceEEEEEecC
Q 047497 507 TKFNLVDPVERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVLDG 563 (580)
Q Consensus 507 ~~~~~~~p~~rDTv~vp~g~~v~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~~~ 563 (580)
.++||+.|.||+.+.|+|++++||.|+||||+++|++.|||+.|.|.+.
T Consensus 253 --------~~~dtv~l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 253 --------HKISAITLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp --------EECSCCCEETTCCBC--------CCCCCBCCSTTTGGGTCBCCC-----
T ss_pred --------EEcceEEECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCCeEEEEEecC
Confidence 3599999999999999999999999999999999999999999999753
No 47
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.85 E-value=6.9e-21 Score=212.26 Aligned_cols=250 Identities=12% Similarity=0.157 Sum_probs=142.2
Q ss_pred ceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEecCCCcCC---c-eEEeEEEeCCCceEEEEEEcCCCC---CC
Q 047497 214 DTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVK---P-FETETLLIAPGQTTNVLLKTKPHY---PS 286 (580)
Q Consensus 214 ~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~---P-~~~d~l~l~pGeR~dv~v~~~~~~---~~ 286 (580)
..|+|+++.|+++++||.|... ....+|.||.... .+.||.+.. | ..+....|.||++++..+++++.. +.
T Consensus 67 pGP~I~~~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~ 144 (647)
T 1sdd_B 67 LGPVIRAEVDDVIQVRFKNLAS-RPYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENP 144 (647)
T ss_dssp SCCCEEEETTCEEEEEECCCSS-SCBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSS
T ss_pred cCceEEEeCCCEEEEEEEECCC-CceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCC
Confidence 4589999999999999999985 5567999987664 478997642 2 223456799999999999998742 12
Q ss_pred c----eEEEEeccccCCCCCCCCcceEEEEEEecCCCCcccCCCCCCCCCcCCCCCCCCCcccccccccccccccCCCCC
Q 047497 287 A----TFFMKARPYVTGQGTFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALNDTSFATSFTNKLRSLASTQFP 362 (580)
Q Consensus 287 g----~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p 362 (580)
| +||.++|...... ....+.+ ++|....... . .. +..+. .+......+ ..+.......+.
T Consensus 145 G~~c~T~wYHsH~~~~~q-~~~GL~G-~lIV~~~~~~--------~--~~--~~~~~-~~~e~~l~l-~~~d~~~~w~~~ 208 (647)
T 1sdd_B 145 GSACRAWAYYSAVNPEKD-IHSGLIG-PLLICRKGTL--------D--KE--TNMPV-DMREFVLLF-MVFDEKKSWYYD 208 (647)
T ss_dssp SCSEEEEEEECCSSHHHH-HTTTCEE-EEEEECTTSS--------C--TT--SCCCS-SCCEEEEEE-EEEEGGGSSCCC
T ss_pred CCCceEEEEccCCCCccc-ccccCcc-CEEEeeCCCc--------c--cc--cCCCC-cceeEEEEE-EeecCccccccc
Confidence 6 9999998631110 0112222 3333321110 0 00 00111 000000000 000000000000
Q ss_pred CCCCCCccceEEEEeccCcccCCCCCcccCCCCCeeeeeecceeeecCchhhhhhhhcCCccCccCCCCCCCCCeecccC
Q 047497 363 ANVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQASVNNISFVMPTTALLQAHFTGKSYGVYNPDFPTSPLIAFNYT 442 (580)
Q Consensus 363 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~ 442 (580)
.. .... +.. ... .. ....-.+.+||..+
T Consensus 209 ~~----~~~~--~~~-~~~-------~~---~~~~~~~~iNG~~~----------------------------------- 236 (647)
T 1sdd_B 209 KK----PTRS--WRR-ASS-------EV---KNSHEFHAINGMIY----------------------------------- 236 (647)
T ss_dssp --------------------------------CCCEEEEETTBSS-----------------------------------
T ss_pred cC----cccc--ccc-CCc-------ch---hhcCceeccCCEec-----------------------------------
Confidence 00 0000 000 000 00 00011234444322
Q ss_pred CCCCCCccccCCceEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEee
Q 047497 443 GTPPNNTMVSNGTKLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGV 522 (580)
Q Consensus 443 ~~~~~~~~~~~~~~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v 522 (580)
..+.+.++.|++++|+|.|.+. ..+.||||+|||.|+|++. ++.++||+.|
T Consensus 237 -----------~~p~l~v~~G~~vrlrliN~~~-~~~~h~~hlhG~~f~vi~~-----------------d~~~~d~v~l 287 (647)
T 1sdd_B 237 -----------NLPGLRMYEQEWVRLHLLNLGG-SRDIHVVHFHGQTLLENGT-----------------QQHQLGVWPL 287 (647)
T ss_dssp -----------CCCCCEEETTCEEEEEEEECCC-TTCCEEEEETTCCEEECSS-----------------SCEEESSEEE
T ss_pred -----------CCCCeEEcCCCEEEEEEEeCCC-CCcceeEEEcCcEEEEecC-----------------CCcccceEEE
Confidence 0124577889999999999752 2358999999999999854 2457999999
Q ss_pred CCCcEEEEEEEecCceeEEEEeechhhhhccceEEEEEec
Q 047497 523 PSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVLD 562 (580)
Q Consensus 523 p~g~~v~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~~ 562 (580)
.||+.+.|+|++++||.|+||||+++|++.|||+.|.|.+
T Consensus 288 ~pg~r~~v~~~~~~pG~w~~hch~~~h~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 288 LPGSFKTLEMKASKPGWWLLDTEVGEIQRAGMQTPFLIVD 327 (647)
T ss_dssp CTTEEEEEEEECCSSEEEEEECCCHHHHTTTCEEEEEEEC
T ss_pred CCCeEEEEEEEeccceEeecccCcccccccccccceeeec
Confidence 9999999999999999999999999999999999999964
No 48
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.85 E-value=1.2e-19 Score=186.78 Aligned_cols=93 Identities=18% Similarity=0.242 Sum_probs=77.5
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCC--ccceEeeCCCcEEEEEEE
Q 047497 456 KLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPV--ERNTVGVPSGGWVAIRFL 533 (580)
Q Consensus 456 ~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~--~rDTv~vp~g~~v~irf~ 533 (580)
..+.++.|++++|++.|.+ ...|++|+|||.|+|+.. |.+ .+++ ++||+.|.+|+.+.|.|+
T Consensus 231 ~~l~v~~G~r~Rl~n~~~~---~~~~~~~i~gh~~~Vi~d--G~~-----------~~~p~~~~dtv~l~pGer~~v~v~ 294 (340)
T 2bw4_A 231 HALTAAVGERVLVVHSQAN---RDTRPHLIGGHGDYVWAT--GKF-----------RNPPDLDQETWLIPGGTAGAAFYT 294 (340)
T ss_dssp GCEEEETTCEEEEEEEESS---SCBCEEEETCCEEEEETT--CCT-----------TSCCEEEESCCCBCTTEEEEEEEE
T ss_pred CceEcCCCCEEEEEECCCC---CccceEEecCcceEEeCC--Ccc-----------cCCccccceEEEeCCCceEEEEEE
Confidence 4578889999998887754 367899999999999853 321 1233 479999999999999999
Q ss_pred ecCceeEEEEeech-hhhhccceEEEEEecCC
Q 047497 534 ADNPGVWFMHCHLE-VHTSWGLKMAWIVLDGK 564 (580)
Q Consensus 534 adnpG~wl~HCHil-~H~d~GM~~~~~V~~~~ 564 (580)
+++||.|+||||++ +|++.|||+.|+|....
T Consensus 295 ~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 295 FRQPGVYAYVNHNLIEAFELGAAGHFKVTGEW 326 (340)
T ss_dssp CCSCEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred CCCCeeeEEEcCchHHHHhCCCEEEEEECCCC
Confidence 99999999999999 59999999999998654
No 49
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.84 E-value=4.2e-20 Score=188.63 Aligned_cols=249 Identities=15% Similarity=0.123 Sum_probs=157.3
Q ss_pred CeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCC-CeEEEEEcCceeeEEecCCCcCCceEEeEEEeCCCceE
Q 047497 196 DAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALN-DELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTT 274 (580)
Q Consensus 196 ~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~ 274 (580)
..+++||+. ..|+|++++|+++|||++|.... ..+.+|+||.. +.||.... ..|.|||++
T Consensus 59 ~~~~~ng~~---------pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~~------~~i~PG~~~ 119 (327)
T 1kbv_A 59 RYWTFDGDV---------PGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAAA------TFTAPGRTS 119 (327)
T ss_dssp EEEEETTBS---------SCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTTT------TCBCTTEEE
T ss_pred EEEEECCcc---------CCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCcc------eeecCCCEE
Confidence 578999984 34899999999999999999753 56789999863 67887431 248999999
Q ss_pred EEEEEcCCCCCCceEEEEeccccCCCCCCCCcceEEEEEEecCCCCcccCCCCCCCCCcCCCCCCCCCcccccccccccc
Q 047497 275 NVLLKTKPHYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALNDTSFATSFTNKLR 354 (580)
Q Consensus 275 dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~ 354 (580)
++.++++++ |+||++|+.......... +..+.+.++... .+ | .. |..... -+.
T Consensus 120 ~y~f~~~~~---Gt~wyH~h~~~~~~~~~~--Gl~G~~iV~~~~-------------~~-p---~~-d~e~~l----~~~ 172 (327)
T 1kbv_A 120 TFSFKALQP---GLYIYHCAVAPVGMHIAN--GMYGLILVEPKE-------------GL-P---KV-DKEFYI----VQG 172 (327)
T ss_dssp EEEEECCSC---EEEEEECCCSSHHHHHHT--TCEEEEEEECTT-------------CC-C---CC-SEEEEE----EEE
T ss_pred EEEEECCCC---eEEEEEeCCCChhhhhhc--ceEEEEEEecCC-------------CC-C---CC-ceEEEE----Eee
Confidence 999999886 999999985211000001 222333333211 01 1 11 000000 000
Q ss_pred cccCCCCCCCCCCCccceEEEEeccCcccCCCCCcccCCCCCeeeeeecceeeecCchhhhhhhhcCCccCccCCCCCCC
Q 047497 355 SLASTQFPANVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQASVNNISFVMPTTALLQAHFTGKSYGVYNPDFPTS 434 (580)
Q Consensus 355 ~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~~~~~~~~~ 434 (580)
...... .. ...... ...... +.+..+ -.+.+||..+.
T Consensus 173 d~~~~~---~~--~~~g~~--~~~~~~--------~~~~~~--~~~~iNG~~~~-------------------------- 209 (327)
T 1kbv_A 173 DFYTKG---KK--GAQGLQ--PFDMDK--------AVAEQP--EYVVFNGHVGA-------------------------- 209 (327)
T ss_dssp EECBSS---CT--TCCEEE--CBCHHH--------HHHTCC--SEEEETTSTTT--------------------------
T ss_pred eeeccC---cc--cccccc--ccChhH--------hccCCC--ceEEEcCcccC--------------------------
Confidence 000000 00 000000 000000 000000 12344443220
Q ss_pred CCeecccCCCCCCCccccCCceEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCC
Q 047497 435 PLIAFNYTGTPPNNTMVSNGTKLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDP 514 (580)
Q Consensus 435 ~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p 514 (580)
. .....+.++.|++++|.|.|.+. ...|+||||||.|+|++.+.+. ..|
T Consensus 210 ----------------~-~~~~~l~v~~G~~vRlRliN~~~--~~~~~~~l~Gh~f~vi~~DG~~------------~~p 258 (327)
T 1kbv_A 210 ----------------L-TGDNALKAKAGETVRMYVGNGGP--NLVSSFHVIGEIFDKVYVEGGK------------LIN 258 (327)
T ss_dssp ----------------T-SGGGCEEEETTEEEEEEEEEEES--SCCEEEEEETCCBSEEEGGGSS------------CEE
T ss_pred ----------------C-CCceeEEeCCCCEEEEEEECCCC--CCceeEEEeCCEEEEEEcCCCc------------CCC
Confidence 0 01235788899999999999652 4689999999999999986331 236
Q ss_pred CccceEeeCCCcEEEEEEEecCceeEEEEeechhhh-hccceEEEEEecCC
Q 047497 515 VERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHT-SWGLKMAWIVLDGK 564 (580)
Q Consensus 515 ~~rDTv~vp~g~~v~irf~adnpG~wl~HCHil~H~-d~GM~~~~~V~~~~ 564 (580)
.++|++.|.+|+.+.|.|++++||.|.+|||+.+|. ..||++++.|....
T Consensus 259 ~~~d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 259 ENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp CSBSEEEECTTEEEEEEEEECSCEEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred CceeEEEECCCCEEEEEEEeCCCeEEEEEeccccccccCCcEEEEEECCCC
Confidence 789999999999999999999999999999999995 89999999997554
No 50
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.80 E-value=5.3e-18 Score=173.82 Aligned_cols=93 Identities=17% Similarity=0.149 Sum_probs=74.0
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCC--ccceEeeCCCcEEEEEEE
Q 047497 456 KLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPV--ERNTVGVPSGGWVAIRFL 533 (580)
Q Consensus 456 ~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~--~rDTv~vp~g~~v~irf~ 533 (580)
..+.++.|++++|++.|.+. ..|++++|+|.|+|++. |.+ ..++ ++||+.|.+|+.+.|.|.
T Consensus 225 ~~l~v~~Ger~Rl~n~~~~~---~~~~h~i~~h~~~Vi~d--G~~-----------~~~p~~~~dtv~l~pGer~~v~v~ 288 (333)
T 1mzy_A 225 GALKAKVGDNVLFVHSQPNR---DSRPHLIGGHGDLVWET--GKF-----------HNAPERDLETWFIRGGTAGAALYK 288 (333)
T ss_dssp GCEEEETTCEEEEEEEESSS---CBCEEEETCCEEEEETT--CCT-----------TSCCEEEESBCCBCTTEEEEEEEE
T ss_pred cceEecCCCEEEEEECCCCC---ccccEEECCCCeEEEeC--Ccc-----------cCCCccCcceEEECCCceEEEEEE
Confidence 34788899999988776432 33444577888988862 321 1222 589999999999999999
Q ss_pred ecCceeEEEEeechhhh-hccceEEEEEecCC
Q 047497 534 ADNPGVWFMHCHLEVHT-SWGLKMAWIVLDGK 564 (580)
Q Consensus 534 adnpG~wl~HCHil~H~-d~GM~~~~~V~~~~ 564 (580)
+++||.|+||||++.|+ +.|||++|+|....
T Consensus 289 a~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 289 FLQPGVYAYVNHNLIEAVHKGATAHVLVEGEW 320 (333)
T ss_dssp CCSCEEEEEEESSHHHHHTTCCEEEEEEESCC
T ss_pred cCCCEEEEEecChhhhHhhCCCEEEEEEcCCC
Confidence 99999999999999997 99999999998644
No 51
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.80 E-value=1.7e-20 Score=210.39 Aligned_cols=87 Identities=16% Similarity=0.361 Sum_probs=76.9
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEecC
Q 047497 457 LVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLADN 536 (580)
Q Consensus 457 ~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~adn 536 (580)
.+.++.|++++|+|.|.+. ..+.||||||||.|+|++.+ +.++|||.|.||+++.|+|++|+
T Consensus 369 ~l~v~~Ge~vr~rliN~g~-~~~~H~fHlhGh~f~Vv~~d-----------------g~~~Dtv~l~Pg~~~~v~~~ad~ 430 (770)
T 2r7e_B 369 GLVMAQDQRIRWYLLSMGS-NENIHSIHFSGHVFTVRKKE-----------------EYKMALYNLYPGVFETVEMLPSK 430 (770)
T ss_dssp CCCCCSSSCEEEECCCCCS-SSCCCEEEBSSCCEECCSSS-----------------CCEESEEECCTTCCCEEEECCSS
T ss_pred CeEEeCCCEEEEEEEeCCC-CcceEEEEEcCCEEEEEecC-----------------CceeeEEEECCCeEEEEEEEeCC
Confidence 3567789999999999753 23589999999999998753 13799999999999999999999
Q ss_pred ceeEEEEeechhhhhccceEEEEEe
Q 047497 537 PGVWFMHCHLEVHTSWGLKMAWIVL 561 (580)
Q Consensus 537 pG~wl~HCHil~H~d~GM~~~~~V~ 561 (580)
||.|+||||+++|++.|||..|.|.
T Consensus 431 pG~w~~hcH~~~H~~~GM~~~~~V~ 455 (770)
T 2r7e_B 431 AGIWRVECLIGEHLHAGMSTLFLVY 455 (770)
T ss_dssp CBCCCBCCCSHHHHTTBCCCCCCBC
T ss_pred CCceEEEeccccccccccccccccc
Confidence 9999999999999999999999884
No 52
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.76 E-value=1e-16 Score=164.50 Aligned_cols=93 Identities=19% Similarity=0.219 Sum_probs=75.0
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCC--ccceEeeCCCcEEEEEEE
Q 047497 456 KLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPV--ERNTVGVPSGGWVAIRFL 533 (580)
Q Consensus 456 ~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~--~rDTv~vp~g~~v~irf~ 533 (580)
..+.++.|++++|+..+.+ ...+++++|||.|.|+. .|.+ ..|+ +.||+.|++|+.+.|.++
T Consensus 225 ~~l~v~~GervRlin~~~~---~~~~~~~i~gh~~~Vi~--DG~~-----------~~p~~~~~dtv~i~pGer~dvlv~ 288 (336)
T 1oe1_A 225 NALTAKVGETVLLIHSQAN---RDTRPHLIGGHGDWVWE--TGKF-----------ANPPQRDLETWFIRGGSAGAALYT 288 (336)
T ss_dssp GCEEEETTCEEEEEEEESS---SCBCEEETTCCEEEEET--TCCT-----------TSCCEEEESBCCBCTTEEEEEEEE
T ss_pred cceEcCCCCEEEEEecCCC---CccceEEECCcCceEeC--CCcC-----------cCCccccceEEEECCCCcEEEEEE
Confidence 4678899999998766543 24566668999999985 2321 2232 469999999999999999
Q ss_pred ecCceeEEEEeechhhh-hccceEEEEEecCC
Q 047497 534 ADNPGVWFMHCHLEVHT-SWGLKMAWIVLDGK 564 (580)
Q Consensus 534 adnpG~wl~HCHil~H~-d~GM~~~~~V~~~~ 564 (580)
+++||.|+||||.+.|. +.||+++|.|.+..
T Consensus 289 ~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 289 FKQPGVYAYLNHNLIEAFELGAAGHIKVEGKW 320 (336)
T ss_dssp CCSCEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred cCCCceEEEEechhhccccCCCeEEEEECCCC
Confidence 99999999999999986 99999999997654
No 53
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.74 E-value=3e-17 Score=174.96 Aligned_cols=249 Identities=13% Similarity=0.111 Sum_probs=157.2
Q ss_pred CeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCC-CeEEEEEcCceeeEEecCCCcCCceEEeEEEeCCCceE
Q 047497 196 DAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALN-DELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTT 274 (580)
Q Consensus 196 ~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~ 274 (580)
..+++||+. ..|.|+++.|++++||+.|.... ..+.+|+||+. ..||... +..|.||+++
T Consensus 49 ~~~~~ng~~---------pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~ 109 (442)
T 2zoo_A 49 VFWSFGETV---------PGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTS 109 (442)
T ss_dssp EEEEETTBS---------SCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEE
T ss_pred EEEEECCcC---------CCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEE
Confidence 578999985 34899999999999999999643 57789999965 4688642 2258999999
Q ss_pred EEEEEcCCCCCCceEEEEeccccCCCCCCCCcceEEEEEEecCCCCcccCCCCCCCCCcCCCCCCCCCcccccccccccc
Q 047497 275 NVLLKTKPHYPSATFFMKARPYVTGQGTFDNSTVAGILEYEKPLNFHLSSNSIKNLPLFKPVLPALNDTSFATSFTNKLR 354 (580)
Q Consensus 275 dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~ 354 (580)
++.++++++ |.||++||........ ..+..+.+.+..... + | .+ +.... --+.
T Consensus 110 ~y~f~~~~~---Gt~~yH~H~~~~~~~~--~~Gl~G~~iv~~~~~-------------~-~---~~-d~e~~----l~l~ 162 (442)
T 2zoo_A 110 TFNFKALNP---GLYIYHCATAPVGMHI--ANGMYGLILVEPKEG-------------L-A---PV-DREYY----LVQG 162 (442)
T ss_dssp EEEEECCSC---EEEEEECCCSSHHHHH--HTTCEEEEEEECTTC-------------C-C---CC-SEEEE----EEEE
T ss_pred EEEEEcCCC---eEEEEecCCCChHHHH--hCccEEEEEEeCCCC-------------C-C---CC-CceEE----EEee
Confidence 999999886 9999999732110000 012334444442210 0 1 01 00000 0000
Q ss_pred cccCCCCCCCCCCCccceEEEEeccCcccCCCCCcccCCCCCeeeeeecceeeecCchhhhhhhhcCCccCccCCCCCCC
Q 047497 355 SLASTQFPANVPQNVDRRFFFTVGLGTSPCQSNQTCQGPNGTMFQASVNNISFVMPTTALLQAHFTGKSYGVYNPDFPTS 434 (580)
Q Consensus 355 ~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~~~~~~~~~ 434 (580)
..... . .............. +.+.. .-.+.+||..+.
T Consensus 163 d~~~~---~----~~~~~~~~~~~~~~--------~~~~~--~~~~liNG~~~~-------------------------- 199 (442)
T 2zoo_A 163 DFYTK---G----EFGEAGLQPFDMAK--------AIDED--ADYVVFNGSVGS-------------------------- 199 (442)
T ss_dssp EECBS---S----CTTCCEEECBCHHH--------HHTTC--CSEEEETTSTTT--------------------------
T ss_pred eeecc---C----cccccccccCChhH--------hccCC--CCEEEECCCcCC--------------------------
Confidence 00000 0 00000000000000 00000 011334443210
Q ss_pred CCeecccCCCCCCCccccCCceEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCC
Q 047497 435 PLIAFNYTGTPPNNTMVSNGTKLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDP 514 (580)
Q Consensus 435 ~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p 514 (580)
......+.++.|++++|.|.|.+. ...|+||+||+.|+|++...+. ..|
T Consensus 200 -----------------~~~~~~l~v~~G~~vrlrliN~~~--~~~~~~~i~g~~~~vi~~DG~~------------~~p 248 (442)
T 2zoo_A 200 -----------------TTDENSLTAKVGETVRLYIGNGGP--NLVSSFHVIGEIFDTVYVEGGS------------LKN 248 (442)
T ss_dssp -----------------TSGGGCEEEETTCEEEEEEEEEES--SCCEEEEEETCCBSEEEGGGSS------------CEE
T ss_pred -----------------CCCCCceEeCCCCEEEEEEEeCCC--CCceeeEEcCCEEEEEecCCcc------------CCC
Confidence 000134678899999999999642 3689999999999999986321 226
Q ss_pred CccceEeeCCCcEEEEEEEecCceeEEEEeechhh-hhccceEEEEEecCC
Q 047497 515 VERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVH-TSWGLKMAWIVLDGK 564 (580)
Q Consensus 515 ~~rDTv~vp~g~~v~irf~adnpG~wl~HCHil~H-~d~GM~~~~~V~~~~ 564 (580)
.+.|++.|.||+...|.|+++++|.|.+|||...| .+.||++.|.|....
T Consensus 249 ~~~~~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 249 HNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNKGALAMLKVEGPD 299 (442)
T ss_dssp CSBSEEEECTTEEEEEEEECCSCEEEEEEESSTHHHHTTSCEEEEEEESCC
T ss_pred ccceEEEECCCeeEEEEEEcCCCCeEEEEecccccccccCceEEEEecCCC
Confidence 68999999999999999999999999999999999 599999999997654
No 54
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.70 E-value=4.6e-16 Score=165.48 Aligned_cols=251 Identities=10% Similarity=0.076 Sum_probs=159.1
Q ss_pred eEEEEEEEEEEeeecC-----------CceeEEEEECCCCCCcEEEEecCCEEEEEEEecCCC-CceEEe-cCCccCCCC
Q 047497 32 TRHYKFDIKLQNVTRL-----------CNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQN-NISIHW-HGIRQLRSG 98 (580)
Q Consensus 32 ~~~~~l~~~~~~~~~~-----------g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~-~~~iH~-HG~~~~~~~ 98 (580)
.+++.|.++.-....+ +.....+++||+. .|+|+|++| ++++||.|.... ...+|+ ||.......
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~ 229 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVIS 229 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEE
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEE
Confidence 4566666665433322 3345789999986 699999999 999999999954 577999 887655432
Q ss_pred CCCCCC-----CccccccCCCCeEEEEEEECCCccceeEeeCcccccccc-------------eeeEEEeCCCCCCCCCC
Q 047497 99 WADGPA-----YITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLSWLRSTL-------------YGPIIILPKRGIPYPFT 160 (580)
Q Consensus 99 ~~DGv~-----~~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~Gl-------------~G~liV~~~~~~~~~~~ 160 (580)
.||.+ .+++..|.||+++++.+++ ++.|+||++++......|+ ...+-.........+
T Consensus 230 -~DG~~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~-- 305 (451)
T 2uxt_A 230 -GDQGFLPAPVSVKQLSLAPGERREILVDM-SNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLV-- 305 (451)
T ss_dssp -CSSSEEEEEEEESSEEECTTCEEEEEEEC-TTCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----
T ss_pred -eCCCccCCceEeceEEECceeEEEEEEEe-CCCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCc--
Confidence 79964 2566789999999999997 5789999999864432221 111111111100000
Q ss_pred CCCCceeeeeeccccCChH-HHHHHhhhcCCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeE
Q 047497 161 KPYKEVPIIFGEWFKADPE-TIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDEL 239 (580)
Q Consensus 161 ~~d~e~~l~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~ 239 (580)
..+.+..|..+...+.. ......... ..++|||+.+.. ..+.+.++.|++++|+|+|. ..+
T Consensus 306 --~~~~p~~L~~~~~~~~~~~~~~~~~l~-------~~~~iNg~~f~~------~~~~~~~~~G~~~~~~l~N~---~~H 367 (451)
T 2uxt_A 306 --TDSLPMRLLPTEIMAGSPIRSRDISLG-------DDPGINGQLWDV------NRIDVTAQQGTWERWTVRAD---EPQ 367 (451)
T ss_dssp ----CCCSCSSSSCCCCCCCSEEEEEEEC-------SSSSBTTBCCCT------TCCCEEEETTCEEEEEEEEE---EEE
T ss_pred --cccCccccCCCCCCCCCCcceEEEEEe-------eEEEECCEeCCC------CCCcEEcCCCCEEEEEEECC---CCc
Confidence 00000001000000000 000000000 036689987632 23568999999999999998 468
Q ss_pred EEEEcCceeeEEecCCCcC---CceEEeEEEeCCCceEEEEEEcCCCCCCce----EEEEeccccCCCCCCCCcceEEEE
Q 047497 240 FFSIANHTLTVVEADAIYV---KPFETETLLIAPGQTTNVLLKTKPHYPSAT----FFMKARPYVTGQGTFDNSTVAGIL 312 (580)
Q Consensus 240 ~~~i~gh~~~via~DG~~v---~P~~~d~l~l~pGeR~dv~v~~~~~~~~g~----y~i~~~~~~~~~~~~~~~~~~ail 312 (580)
.||||||.|+|++.||.+. +|...|++.| |+++.|.++++++ |. |.++||-..-.. .+..+.+
T Consensus 368 P~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~dnp---g~~~g~w~~HCHil~H~d-----~GMm~~~ 437 (451)
T 2uxt_A 368 AFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFGQP---SWAHFPFYFNSQTLEMAD-----RGSIGQL 437 (451)
T ss_dssp EEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECCSC---CBTTBCEEEEESSHHHHH-----TTCEEEE
T ss_pred CeEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeCCC---CCCCCceEEeCCchhHHh-----CCCcEEE
Confidence 8999999999999999876 4789999999 9999999999987 55 999999643221 2344555
Q ss_pred EEec
Q 047497 313 EYEK 316 (580)
Q Consensus 313 ~y~~ 316 (580)
.+..
T Consensus 438 ~v~~ 441 (451)
T 2uxt_A 438 LVNP 441 (451)
T ss_dssp EEEC
T ss_pred EEcc
Confidence 5543
No 55
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.68 E-value=2.1e-15 Score=160.08 Aligned_cols=214 Identities=14% Similarity=0.177 Sum_probs=153.9
Q ss_pred ceeEEEEECCCCCCcEEEEecCCEEEEEEEecCCC-CceEEecCCccCCCCCCCCCCC-----ccccccCCCCeEEEEEE
Q 047497 49 NTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQN-NISIHWHGIRQLRSGWADGPAY-----ITQCPIQTGQSYVYNFT 122 (580)
Q Consensus 49 ~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~-~~~iH~HG~~~~~~~~~DGv~~-----~tq~~i~PG~~~~Y~f~ 122 (580)
.....+++||+. .|.|+|++| ++++||.|.... ...+|++|....... .||.+- +....|.||++++..++
T Consensus 175 ~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~-~DG~~~~~p~~~~~l~l~pgeR~dv~v~ 251 (439)
T 2xu9_A 175 KEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIA-ADGGFLEEPLEVSELLLAPGERAEVLVR 251 (439)
T ss_dssp CCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEEESCEEECTTCEEEEEEE
T ss_pred CCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEe-cCCCCCCCceEeceEEECCceeEEEEEE
Confidence 445689999997 699999999 999999999854 578999998765432 798652 34566899999999999
Q ss_pred ECCCccceeEeeCccccc----ccc--------------eeeEEEe--CCCCCCCCCCCCC----------Cceeeeeec
Q 047497 123 IVGQRGTLWWHAHLSWLR----STL--------------YGPIIIL--PKRGIPYPFTKPY----------KEVPIIFGE 172 (580)
Q Consensus 123 ~~~~~Gt~wYH~H~~~~~----~Gl--------------~G~liV~--~~~~~~~~~~~~d----------~e~~l~~~d 172 (580)
+ +++|.||++++..... .|| ....+++ .+. ...+++... .+..+.+.-
T Consensus 252 ~-~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~p~~l~~~~~l~~~~~~r~~~l~~ 329 (439)
T 2xu9_A 252 L-RKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNP-KPLPLPKALSPFPTLPAPVVTRRLVLTE 329 (439)
T ss_dssp C-CSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSC-CCCCCCSCCCCCCCCCCCSEEEEEEEEE
T ss_pred c-CCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCC-ccccCcccCCCcccCCCCCcceEEEEEe
Confidence 7 6699999999743211 122 1122222 221 111111000 001111110
Q ss_pred cccCChHHHHHHhhhcCCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEe
Q 047497 173 WFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVE 252 (580)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via 252 (580)
+. .+..+.|||+.+.. ....+.++.|++++|+|.|.+. ..+.||||||.|+|++
T Consensus 330 ----------------~~---~g~~~~iNg~~~~~------~~~~~~~~~g~~~~~~~~N~~~-~~HP~HLHG~~F~Vl~ 383 (439)
T 2xu9_A 330 ----------------DM---MAARFFINGQVFDH------RRVDLKGQAQTVEVWEVENQGD-MDHPFHLHVHPFQVLS 383 (439)
T ss_dssp ----------------EG---GGTEEEETTBCCCT------TCCCEEECTTCEEEEEEEECSS-SCEEEEESSCCBEEEE
T ss_pred ----------------ec---cCceEeECCEECCC------CCCceecCCCCEEEEEEEcCCC-CCCCceeCCCcEEEEe
Confidence 00 01368899997632 2245889999999999999974 4577999999999999
Q ss_pred cCCCcC-CceEEeEEEeCCCceEEEEEEcCCCCCCceEEEEeccc
Q 047497 253 ADAIYV-KPFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPY 296 (580)
Q Consensus 253 ~DG~~v-~P~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~ 296 (580)
.+|... .|...|++.|.||+++.|.++++++ |.|.++||-.
T Consensus 384 ~~g~~~~~p~~rDTv~v~p~~~v~i~f~adnp---G~w~~HCHil 425 (439)
T 2xu9_A 384 VGGRPFPYRAWKDVVNLKAGEVARLLVPLREK---GRTVFHCHIV 425 (439)
T ss_dssp ETTEECSSCCCBSEEEECTTCEEEEEEECCSC---EEEEEEESSH
T ss_pred eCCCCCCCCCCeEEEEeCCCCEEEEEEEcCCC---CCEEEECCcc
Confidence 999876 6889999999999999999999888 9999999954
No 56
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.59 E-value=1.2e-13 Score=148.94 Aligned_cols=240 Identities=15% Similarity=0.149 Sum_probs=154.3
Q ss_pred eEEEEECCCCC--------CcEEEEecCCEEEEEEEecCCC-CceEEecCCccCCCCCCCCCC----CccccccCCCCeE
Q 047497 51 KSIISVNGKFP--------GPRIVAREGDQLLIKVMNHVQN-NISIHWHGIRQLRSGWADGPA----YITQCPIQTGQSY 117 (580)
Q Consensus 51 ~~~~~~Ng~~p--------gP~i~v~~Gd~v~v~l~N~l~~-~~~iH~HG~~~~~~~~~DGv~----~~tq~~i~PG~~~ 117 (580)
...+++||+.. .|+|+|++|+++++||.|.... ...+|++|....... .||.+ .+....|.|||++
T Consensus 165 ~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgeR~ 243 (503)
T 1hfu_A 165 PDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIE-VDGELTEPHTVDRLQIFTGQRY 243 (503)
T ss_dssp CSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTCEE
T ss_pred CCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEe-ccCccccccccCeEEEcccceE
Confidence 46789999763 2899999999999999999854 567999887665432 78864 1344568999999
Q ss_pred EEEEEECCCccceeEeeCcccc-------c-ccceeeEEEeCCCCCCCCCCCCCCceeeeeeccccCCh--HHH----H-
Q 047497 118 VYNFTIVGQRGTLWWHAHLSWL-------R-STLYGPIIILPKRGIPYPFTKPYKEVPIIFGEWFKADP--ETI----I- 182 (580)
Q Consensus 118 ~Y~f~~~~~~Gt~wYH~H~~~~-------~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~--~~~----~- 182 (580)
+..+++...+|.||.+++.... . .|+..+++.........+......+. ..+.+...... ... .
T Consensus 244 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~-~~l~~~~l~p~~~~~~p~~~~~ 322 (503)
T 1hfu_A 244 SFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP-AQLNEADLHALIDPAAPGIPTP 322 (503)
T ss_dssp EEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSC-CBCCGGGCBBSSSCSCSSCSST
T ss_pred EEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCcc-CCCccccccccCccCCCCcccC
Confidence 9999985557999999985411 1 23433444332211110100000000 00000000000 000 0
Q ss_pred ---HHhhhcCCCCCCCCeEEEcCCCCCCCCC-------C--------CCceeEEEEeCCCEEEEEEEecCCCCeEEEEEc
Q 047497 183 ---SQALQTGGGPNVSDAYTINGLPGPLYNC-------S--------AKDTFKLKVKPGKTYLLRLINAALNDELFFSIA 244 (580)
Q Consensus 183 ---~~~~~~~~~~~~~~~~liNG~~~~~~~~-------~--------~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~ 244 (580)
.....-... .....+.|||+.+..-.. + ......+.++.|++++++++|......+.||||
T Consensus 323 ~~~~~~~~l~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLH 401 (503)
T 1hfu_A 323 GAADVNLRFQLG-FSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLH 401 (503)
T ss_dssp TCSSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEET
T ss_pred CcceEEEEEEee-ccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccCCCEEEEEEECCCCCCCCCEEEe
Confidence 000000000 011268899997632110 0 012357899999999999995444557789999
Q ss_pred CceeeEEecCCCcC----CceEEeEEEe-CCCceEEEEEEcCCCCCCceEEEEeccc
Q 047497 245 NHTLTVVEADAIYV----KPFETETLLI-APGQTTNVLLKTKPHYPSATFFMKARPY 296 (580)
Q Consensus 245 gh~~~via~DG~~v----~P~~~d~l~l-~pGeR~dv~v~~~~~~~~g~y~i~~~~~ 296 (580)
||.|+|++.+|... .|...|++.| .||+++.|.++++++ |.|.++||..
T Consensus 402 Gh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~adnP---G~W~~HCHil 455 (503)
T 1hfu_A 402 GHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDNP---GPWFFHCHIE 455 (503)
T ss_dssp TCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECCSC---EEEEEEESSH
T ss_pred cceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcCCC---eeeeEecCch
Confidence 99999999998753 6889999999 899999999999998 9999999963
No 57
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.59 E-value=1.2e-13 Score=149.50 Aligned_cols=236 Identities=16% Similarity=0.189 Sum_probs=153.8
Q ss_pred eEEEEECCCCC---------CcEEEEecCCEEEEEEEecCCC-CceEEecCCccCCCCCCCCCCC----ccccccCCCCe
Q 047497 51 KSIISVNGKFP---------GPRIVAREGDQLLIKVMNHVQN-NISIHWHGIRQLRSGWADGPAY----ITQCPIQTGQS 116 (580)
Q Consensus 51 ~~~~~~Ng~~p---------gP~i~v~~Gd~v~v~l~N~l~~-~~~iH~HG~~~~~~~~~DGv~~----~tq~~i~PG~~ 116 (580)
...+++||+.. -|+|+|++|+++++||.|.... ...+|++|....... .||.+- +....|.|||+
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgqR 269 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIE-VDGVSHQPLTVDSLTIFAGQR 269 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEe-cCCccccceeeeeEEEcccce
Confidence 46789999753 1899999999999999999954 567999988665432 798642 34566899999
Q ss_pred EEEEEEECCCccceeEeeCcccc----cccceeeEEEeCCCCCCCCCCCCCCceeeeeeccccC-----Ch-H-HH---H
Q 047497 117 YVYNFTIVGQRGTLWWHAHLSWL----RSTLYGPIIILPKRGIPYPFTKPYKEVPIIFGEWFKA-----DP-E-TI---I 182 (580)
Q Consensus 117 ~~Y~f~~~~~~Gt~wYH~H~~~~----~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~-----~~-~-~~---~ 182 (580)
++..+++...+|.||.+++.... ..|+..+++.........+..... . ...+.+.... .. . .. .
T Consensus 270 ~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~-~~~~~~~~l~p~~~~~~p~~~~~~~~ 347 (521)
T 1v10_A 270 YSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN-S-GTALNEANLIPLINPGAPGNPVPGGA 347 (521)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-C-SCBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-c-ccccchhhcccCCcccCCCcccCCcc
Confidence 99999985557999999986421 134433444432221111110000 0 0000000000 00 0 00 0
Q ss_pred H-Hh-hhcCCCCCCCCeEEEcCCCCCCCCC-------------C--CCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcC
Q 047497 183 S-QA-LQTGGGPNVSDAYTINGLPGPLYNC-------------S--AKDTFKLKVKPGKTYLLRLINAALNDELFFSIAN 245 (580)
Q Consensus 183 ~-~~-~~~~~~~~~~~~~liNG~~~~~~~~-------------~--~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~g 245 (580)
. .. +..+. ......+.|||+.+..-.. . ......+.++.|++++++++| ...+.|||||
T Consensus 348 ~~~~~l~~~~-~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N---~~~HP~HLHG 423 (521)
T 1v10_A 348 DINLNLRIGR-NATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG---GGNHPFHLHG 423 (521)
T ss_dssp SEEEECCEEC-CSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC---CBSCEEEESS
T ss_pred eEEEEEEEec-CCceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC---CCCCCEEEcc
Confidence 0 00 00000 0011257899997632110 0 012357899999999999999 3567899999
Q ss_pred ceeeEEecCCCc----CCceEEeEEEe-CCCceEEEEEEcCCCCCCceEEEEeccc
Q 047497 246 HTLTVVEADAIY----VKPFETETLLI-APGQTTNVLLKTKPHYPSATFFMKARPY 296 (580)
Q Consensus 246 h~~~via~DG~~----v~P~~~d~l~l-~pGeR~dv~v~~~~~~~~g~y~i~~~~~ 296 (580)
|.|+|++.+|.. ..|...|++.| .+|+++.|.++++++ |.|.++||-.
T Consensus 424 h~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNP---G~W~~HCHi~ 476 (521)
T 1v10_A 424 HNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNP---GPWFLHCHID 476 (521)
T ss_dssp CCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECCSC---EEEEEEESCH
T ss_pred ceEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeCCC---eeEEEeeChH
Confidence 999999999875 36889999999 799999999999998 9999999963
No 58
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.57 E-value=8.1e-16 Score=129.85 Aligned_cols=90 Identities=18% Similarity=0.163 Sum_probs=71.3
Q ss_pred CCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCC--CCCCCCCCccccccCCCCeEEEEEEECCCccceeEeeC
Q 047497 58 GKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRS--GWADGPAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAH 135 (580)
Q Consensus 58 g~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~--~~~DGv~~~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H 135 (580)
-+|++|+|++++||+|+ ++|.+..++++||||...+.. ..+||.+ .+++.|.||++++|+|++++++|+||||||
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~ 90 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYCA 90 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEECT
T ss_pred cEEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEeC
Confidence 36788999999999974 679998999999999876531 0123332 356789999999999986578999999999
Q ss_pred cccccccceeeEEEeC
Q 047497 136 LSWLRSTLYGPIIILP 151 (580)
Q Consensus 136 ~~~~~~Gl~G~liV~~ 151 (580)
.| ..+||.|.|+|++
T Consensus 91 ~H-~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 PH-RGAGMVGKITVEG 105 (105)
T ss_dssp TT-GGGTCEEEEEECC
T ss_pred Cc-hhcCCEEEEEEcC
Confidence 43 3479999999974
No 59
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.54 E-value=2.8e-13 Score=144.27 Aligned_cols=226 Identities=14% Similarity=0.175 Sum_probs=151.8
Q ss_pred eeEEEEECCCCCCcEEEEecCCEEEEEEEecCC-CCceEEecCCccCCCCCCCCCC-----CccccccCCCCeEEEEEEE
Q 047497 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQ-NNISIHWHGIRQLRSGWADGPA-----YITQCPIQTGQSYVYNFTI 123 (580)
Q Consensus 50 ~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~-----~~tq~~i~PG~~~~Y~f~~ 123 (580)
....+++||+. .|+|.|++|+ ++||.|... ....+|++|...... ..||.. .+....|.|||+++..++.
T Consensus 210 ~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vI-a~DGg~~~~P~~~~~l~l~pgeR~dvlv~~ 285 (481)
T 3zx1_A 210 EGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFILV-GTDGGLIEKTIYKEELFLSPASRVEVLIDA 285 (481)
T ss_dssp CCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEE-EETTEEEEEEEEESSEEECTTCEEEEEEEC
T ss_pred cCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEEE-EcCCCccCCceEeCeEEECCccEEEEEEEc
Confidence 34689999997 5999999999 999999984 567799999875543 278732 2455679999999999997
Q ss_pred CCCccceeEeeCccccc---------ccceeeEEEeCCCCCCCC--------CCCCCCceeeeeeccccCChHHHHHHhh
Q 047497 124 VGQRGTLWWHAHLSWLR---------STLYGPIIILPKRGIPYP--------FTKPYKEVPIIFGEWFKADPETIISQAL 186 (580)
Q Consensus 124 ~~~~Gt~wYH~H~~~~~---------~Gl~G~liV~~~~~~~~~--------~~~~d~e~~l~~~d~~~~~~~~~~~~~~ 186 (580)
.+.|+|..-++..... .....-+.+...+ ...| ++..+..+.+.++.....-. ...
T Consensus 286 -~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~lP~~l~~~~~~~~~~~~r~~~l~~~~~~~~-----~~~ 358 (481)
T 3zx1_A 286 -PKDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKEN-VELPKNLKIFKPSEEPKEFKEIIMSEDHMQMH-----GMM 358 (481)
T ss_dssp -SSCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCC-CCCCSCSCCCCCCCCCCEEEEEEEEECCSTTT-----TGG
T ss_pred -CCCcEEEEEEecccccCccccCCCCceeEEEEecCCCC-ccCCccccCCCCCCCCCcEEEEEEeccchhcc-----ccc
Confidence 6678887776542210 0001112222211 1111 11122333344432110000 000
Q ss_pred hcCCCC---CCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEec--CCCcC---
Q 047497 187 QTGGGP---NVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEA--DAIYV--- 258 (580)
Q Consensus 187 ~~~~~~---~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~--DG~~v--- 258 (580)
..+... .....++|||+.+.. ..+.++++.|++++|+|+|.+ ...+.||||||+|+|++. ||...
T Consensus 359 ~~~~~~~~~~~~~~~~iNG~~~~~------~~~~~~~~~G~~v~w~l~N~~-~~~Hp~HlHG~~F~vl~~~~~g~~~~~~ 431 (481)
T 3zx1_A 359 GKSEGELKIALASMFLINRKSYDL------KRIDLSSKLGVVEDWIVINKS-HMDHPFHIHGTQFELISSKLNGKVQKAE 431 (481)
T ss_dssp GCCHHHHHHHHHTTEEETTBCCCT------TCCCEEEETTCCEEEEEEECS-SSCEEEEETTCCEEEEEEEETTEEEECS
T ss_pred ccccccccccccceeEECCEeCCC------CCceEEeCCCCEEEEEEEcCC-CCceeEEEeccEEEEEEecccCCCCCcc
Confidence 000000 001248999997631 346799999999999999976 556789999999999999 99865
Q ss_pred CceEEeEEEeCCCceEEEEEEcCCCCCCceEEEEeccc
Q 047497 259 KPFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPY 296 (580)
Q Consensus 259 ~P~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~ 296 (580)
++.+.|++.|.||+++.|.++++.+ |.|.++||..
T Consensus 432 ~~~~kDTv~v~Pg~~~~i~~~~d~p---G~w~~HCHil 466 (481)
T 3zx1_A 432 FRALRDTINVRPNEELRLRMKQDFK---GLRMYHCHIL 466 (481)
T ss_dssp SCCEESEEEECTTCEEEEEECCCSC---EEEEEEESSH
T ss_pred cCcccceEEECCCCEEEEEEEcCCC---eeEEEEcCCh
Confidence 4678999999999999999999888 9999999964
No 60
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.50 E-value=1.8e-12 Score=138.91 Aligned_cols=240 Identities=15% Similarity=0.138 Sum_probs=152.2
Q ss_pred eeEEEEECCCC---------CCcEEEEecCCEEEEEEEecCC-CCceEEecCCccCCCCCCCCCCC----ccccccCCCC
Q 047497 50 TKSIISVNGKF---------PGPRIVAREGDQLLIKVMNHVQ-NNISIHWHGIRQLRSGWADGPAY----ITQCPIQTGQ 115 (580)
Q Consensus 50 ~~~~~~~Ng~~---------pgP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~~----~tq~~i~PG~ 115 (580)
....+++||+- +-|.|+|++|+++++||.|... ....+|++|....... .||.+- +....|.|||
T Consensus 167 ~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGq 245 (495)
T 3t6v_A 167 TADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIE-TDGVDSQELTVDEIQIFAAQ 245 (495)
T ss_dssp CCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTC
T ss_pred CCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-eCCcccCCEEeeeEEEcCce
Confidence 45789999963 3479999999999999999874 4567888887655432 788641 3456689999
Q ss_pred eEEEEEEECCCccceeEeeCcccc----cccceeeEEEeCCCCCCCCCCCCCC-ceeeeeeccccCCh-------HHHH-
Q 047497 116 SYVYNFTIVGQRGTLWWHAHLSWL----RSTLYGPIIILPKRGIPYPFTKPYK-EVPIIFGEWFKADP-------ETII- 182 (580)
Q Consensus 116 ~~~Y~f~~~~~~Gt~wYH~H~~~~----~~Gl~G~liV~~~~~~~~~~~~~d~-e~~l~~~d~~~~~~-------~~~~- 182 (580)
+++..+++.+.+|.||.++..... ..|...+++.........|...... ... .+.+...... ....
T Consensus 246 R~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~~~ 324 (495)
T 3t6v_A 246 RYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTK-CLIETDLHPLSRNGVPGNPHQG 324 (495)
T ss_dssp EEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSS-BCCGGGCCBSSCCCCSSCSSTT
T ss_pred EEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCcc-ccccccccccccccCCCccCCC
Confidence 999999985556999999875321 1233334443332211111100000 000 0001000000 0000
Q ss_pred --HHhhhcCCCCCCCCeEEEcCCCCCCCCC-------C--------CCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcC
Q 047497 183 --SQALQTGGGPNVSDAYTINGLPGPLYNC-------S--------AKDTFKLKVKPGKTYLLRLINAALNDELFFSIAN 245 (580)
Q Consensus 183 --~~~~~~~~~~~~~~~~liNG~~~~~~~~-------~--------~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~g 245 (580)
+....-. .......+.|||+.+..-.. + ......+.++.|++++|.|.|......+.|||||
T Consensus 325 ~~d~~~~l~-~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHG 403 (495)
T 3t6v_A 325 GADCNLNLS-LGFACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHG 403 (495)
T ss_dssp CSSEEEECC-EEEETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETT
T ss_pred CCcEEEEEE-EEecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeecC
Confidence 0000000 00011357899987532110 0 0123468999999999999843334567899999
Q ss_pred ceeeEEecCCCcC----CceEEeEEEeCC-CceEEEEEEcCCCCCCceEEEEecc
Q 047497 246 HTLTVVEADAIYV----KPFETETLLIAP-GQTTNVLLKTKPHYPSATFFMKARP 295 (580)
Q Consensus 246 h~~~via~DG~~v----~P~~~d~l~l~p-GeR~dv~v~~~~~~~~g~y~i~~~~ 295 (580)
|.|+|++.+|... .|...|++.|.+ |+.+.+.++++++ |.|.++||.
T Consensus 404 h~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~adnP---G~W~~HCHi 455 (495)
T 3t6v_A 404 HDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNP---GPWFLHCHI 455 (495)
T ss_dssp CCEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECCSC---EEEEEEESC
T ss_pred CcEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcCCC---eeEEEEecc
Confidence 9999999988654 688999999997 9999999999999 999999995
No 61
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.46 E-value=2.4e-12 Score=137.12 Aligned_cols=235 Identities=11% Similarity=0.106 Sum_probs=149.4
Q ss_pred eeEEEEECCCCCCcEEEEecCCEEEEEEEecCC-CCceEEe-cCCccCCCCCCCCCC-----CccccccCCCCeEEEEEE
Q 047497 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQ-NNISIHW-HGIRQLRSGWADGPA-----YITQCPIQTGQSYVYNFT 122 (580)
Q Consensus 50 ~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~~iH~-HG~~~~~~~~~DGv~-----~~tq~~i~PG~~~~Y~f~ 122 (580)
....+++||+. .|.+.+ +|+++++||.|... ....+++ +|....... .||.+ .++...|.|||+++..++
T Consensus 182 ~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa-~DG~~l~~P~~~~~l~l~pGeR~dvlv~ 258 (488)
T 3od3_A 182 FGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIA-SDGGLLPEPVKVSELPVLMGERFEVLVE 258 (488)
T ss_dssp CCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEE-ETTEEEEEEEEESCEEECTTCEEEEEEE
T ss_pred CCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEE-eCCCcccCccEeceEEECCCCEEEEEEE
Confidence 34689999986 588876 67899999999984 4567888 676543322 78843 244577999999999999
Q ss_pred ECCCccceeEeeCcccccccc-----e---eeEEEeC---CCCCCCC-----CC---C----CCCceeeeeeccc-cCCh
Q 047497 123 IVGQRGTLWWHAHLSWLRSTL-----Y---GPIIILP---KRGIPYP-----FT---K----PYKEVPIIFGEWF-KADP 178 (580)
Q Consensus 123 ~~~~~Gt~wYH~H~~~~~~Gl-----~---G~liV~~---~~~~~~~-----~~---~----~d~e~~l~~~d~~-~~~~ 178 (580)
+ .+.++|+.-+..... .|+ . -.+-|.+ ++....| ++ . ..+++.+.+..-. ....
T Consensus 259 ~-~~~~~~~l~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~ 336 (488)
T 3od3_A 259 V-NDNKPFDLVTLPVSQ-MGMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRKLQLSMDPMLDMMGM 336 (488)
T ss_dssp E-CTTCCEEEEECCCSS-TTTTSTTTTSCEEEEEEEEEEEECCCCCCSCCCCCCCCCCCTTCCEEEEEEEECHHHHHHHH
T ss_pred e-CCCceEEEEEeccCC-CCcccccccCccceeEecccccCCCCCCCcccccCCCCcccccccceEEEEEeccccccccc
Confidence 8 567788776643221 111 0 1122221 0111111 01 0 1133334332100 0000
Q ss_pred HHHHHHhh---hcCC----------CC-C----------CCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecC
Q 047497 179 ETIISQAL---QTGG----------GP-N----------VSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAA 234 (580)
Q Consensus 179 ~~~~~~~~---~~~~----------~~-~----------~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~ 234 (580)
..++.++. ..+. .. . ....++|||+.+.. ..+.++++.|+++||+|+|.+
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~~~------~~~~~~~~~G~~e~w~l~N~~ 410 (488)
T 3od3_A 337 QMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFDM------NKPMFAAAKGQYERWVISGVG 410 (488)
T ss_dssp HHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCCCT------TCCSEECCBSSCEEEEEECTT
T ss_pred ccccccccccccccccccccccccccCccccccccccccccceeeECCeeCCC------CCCceEcCCCCEEEEEEEeCC
Confidence 00000000 0000 00 0 01237999998642 346689999999999999999
Q ss_pred CCCeEEEEEcCceeeEEecCCCcCC---ceEEeEEEeCCCceEEEEEEcCCCC-CCceEEEEeccc
Q 047497 235 LNDELFFSIANHTLTVVEADAIYVK---PFETETLLIAPGQTTNVLLKTKPHY-PSATFFMKARPY 296 (580)
Q Consensus 235 ~~~~~~~~i~gh~~~via~DG~~v~---P~~~d~l~l~pGeR~dv~v~~~~~~-~~g~y~i~~~~~ 296 (580)
....+.||||||+|+|++.||.... +.+.|++.|. |+++.|+++++.+. ..|.|.++||..
T Consensus 411 ~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l 475 (488)
T 3od3_A 411 DMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLL 475 (488)
T ss_dssp CCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSH
T ss_pred CCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCch
Confidence 7667889999999999999998774 4579999999 99999999998642 127999999964
No 62
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.46 E-value=5.7e-12 Score=136.60 Aligned_cols=239 Identities=11% Similarity=0.100 Sum_probs=150.0
Q ss_pred eEEEEECCCCCCcEEEEecCCEEEEEEEecCC-CCceEEecCCccCCCCCCCCCC----CccccccCCCCeEEEEEEECC
Q 047497 51 KSIISVNGKFPGPRIVAREGDQLLIKVMNHVQ-NNISIHWHGIRQLRSGWADGPA----YITQCPIQTGQSYVYNFTIVG 125 (580)
Q Consensus 51 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~----~~tq~~i~PG~~~~Y~f~~~~ 125 (580)
...+++||+. .|+|+|++|+++++||.|... ....+|++|....... .||.+ .+....|.|||+++..+++..
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVE-IDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEe-ccCcCccccEeceEEECccceEEEEEEcCC
Confidence 4688999986 699999999999999999985 4567888887655432 78864 234466899999999999743
Q ss_pred C-ccceeEeeCccccc-------ccceeeEEEeCCCCCCCCCCCCCCceeeeeecccc----------CChHHHHHHhhh
Q 047497 126 Q-RGTLWWHAHLSWLR-------STLYGPIIILPKRGIPYPFTKPYKEVPIIFGEWFK----------ADPETIISQALQ 187 (580)
Q Consensus 126 ~-~Gt~wYH~H~~~~~-------~Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~----------~~~~~~~~~~~~ 187 (580)
+ .|.||......... ....+..+++-......+.+....+....+.+... .....+... ..
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~-~~ 323 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVD-VV 323 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEE-EE
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEE-EE
Confidence 3 57999998754321 11122223332211111100000000000000000 000000000 00
Q ss_pred cCCCCCCCCeEEEcCCCCCCCCC--------------C----CCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceee
Q 047497 188 TGGGPNVSDAYTINGLPGPLYNC--------------S----AKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLT 249 (580)
Q Consensus 188 ~~~~~~~~~~~liNG~~~~~~~~--------------~----~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~ 249 (580)
..........++|||+.+..-.. + ......+.++.|++++|.|.|.+. ..+.||||||.|+
T Consensus 324 ~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~-~~HP~HLHGh~F~ 402 (534)
T 1zpu_A 324 MDNLKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDT-GTHPFHLHGHAFQ 402 (534)
T ss_dssp EEECTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECSS-SCEEEEETTCCEE
T ss_pred eeccCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCCC-CCCCeEecCCceE
Confidence 00000112457899987532100 0 001346889999999999999874 4577999999999
Q ss_pred EEecCCC--------------------cCCceEEeEEEeCCCceEEEEEEcCCCCCCceEEEEeccc
Q 047497 250 VVEADAI--------------------YVKPFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPY 296 (580)
Q Consensus 250 via~DG~--------------------~v~P~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~ 296 (580)
|++.++. ...|...|++.|.||+.+.|.++++++ |.|.+|||-.
T Consensus 403 Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aDNP---G~W~~HCHi~ 466 (534)
T 1zpu_A 403 TIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKADNP---GVWFFHCHIE 466 (534)
T ss_dssp EEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECCSC---EEEEEEECCH
T ss_pred EEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeCCC---eeEEEEeCch
Confidence 9998853 124788999999999999999999998 9999999953
No 63
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.45 E-value=7.6e-12 Score=134.10 Aligned_cols=240 Identities=14% Similarity=0.116 Sum_probs=150.7
Q ss_pred eeEEEEECCCC--------CCcEEEEecCCEEEEEEEecCC-CCceEEecCCccCCCCCCCCCC----CccccccCCCCe
Q 047497 50 TKSIISVNGKF--------PGPRIVAREGDQLLIKVMNHVQ-NNISIHWHGIRQLRSGWADGPA----YITQCPIQTGQS 116 (580)
Q Consensus 50 ~~~~~~~Ng~~--------pgP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~----~~tq~~i~PG~~ 116 (580)
....++|||+- +-|.|+|++|+++++||.|... ....+|++|....... .||.+ .+....|.|||+
T Consensus 165 ~~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGqR 243 (499)
T 3pxl_A 165 GADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIE-VDSVNSQPLEVDSIQIFAAQR 243 (499)
T ss_dssp SCSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CCcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-ECCcccCceEeeeEEECCCcE
Confidence 35789999973 3479999999999999999885 4567999988765532 78864 234466899999
Q ss_pred EEEEEEECCCccceeEeeCcccc---c-ccceeeEEEeCCCCCCCCCCCCCCceeeeeeccccCC-------hHHHH---
Q 047497 117 YVYNFTIVGQRGTLWWHAHLSWL---R-STLYGPIIILPKRGIPYPFTKPYKEVPIIFGEWFKAD-------PETII--- 182 (580)
Q Consensus 117 ~~Y~f~~~~~~Gt~wYH~H~~~~---~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~-------~~~~~--- 182 (580)
++..+++.+.+|.||..+..... . .+..-+++.........+........ ..+.+..... .....
T Consensus 244 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~~ 322 (499)
T 3pxl_A 244 YSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSV-KPLNEVDLHPLVSTPVPGAPSSGGV 322 (499)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCS-SBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCC-cccccccccccccccCCCcccCCCC
Confidence 99999985556999999864321 1 22222333332221111110000000 0000100000 00000
Q ss_pred HHhhhcCCCCCCCCeEEEcCCCCCCCCC-------C--------CCceeEEEEeCCCEEEEEEEecC--CCCeEEEEEcC
Q 047497 183 SQALQTGGGPNVSDAYTINGLPGPLYNC-------S--------AKDTFKLKVKPGKTYLLRLINAA--LNDELFFSIAN 245 (580)
Q Consensus 183 ~~~~~~~~~~~~~~~~liNG~~~~~~~~-------~--------~~~~~~l~v~~G~~~rlRliN~~--~~~~~~~~i~g 245 (580)
+....-. .......+.|||+.+..-.. + ......+.++.|++++|.|.|.+ ....+.||+||
T Consensus 323 d~~~~l~-~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHG 401 (499)
T 3pxl_A 323 DKAINMA-FNFNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHG 401 (499)
T ss_dssp SEEEECC-EEECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETT
T ss_pred cEEEEEE-EEecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCccceecC
Confidence 0000000 00011357899987531100 0 01235789999999999999432 23457899999
Q ss_pred ceeeEEecCCCcC----CceEEeEEEeCC---CceEEEEEEcCCCCCCceEEEEecc
Q 047497 246 HTLTVVEADAIYV----KPFETETLLIAP---GQTTNVLLKTKPHYPSATFFMKARP 295 (580)
Q Consensus 246 h~~~via~DG~~v----~P~~~d~l~l~p---GeR~dv~v~~~~~~~~g~y~i~~~~ 295 (580)
|.|+|++.+|... .|...|++.|.+ |+.+.+.++++++ |.|.++||.
T Consensus 402 h~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnP---G~W~~HCHi 455 (499)
T 3pxl_A 402 HTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNP---GPWFLHCHI 455 (499)
T ss_dssp CCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECCSC---EEEEEEESS
T ss_pred CcEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcCCC---ceEEEEeCC
Confidence 9999999888643 688999999986 9999999999999 999999995
No 64
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.45 E-value=4.1e-12 Score=138.67 Aligned_cols=222 Identities=17% Similarity=0.179 Sum_probs=139.5
Q ss_pred EEEEecCCEEEEEEEecCCC-CceEEecCCccCCCCCCCCCC----CccccccCCCCeEEEEEEE-CCCccceeEeeCcc
Q 047497 64 RIVAREGDQLLIKVMNHVQN-NISIHWHGIRQLRSGWADGPA----YITQCPIQTGQSYVYNFTI-VGQRGTLWWHAHLS 137 (580)
Q Consensus 64 ~i~v~~Gd~v~v~l~N~l~~-~~~iH~HG~~~~~~~~~DGv~----~~tq~~i~PG~~~~Y~f~~-~~~~Gt~wYH~H~~ 137 (580)
+|+|++|+++++||.|.... ...+|++|....... .||.+ .+....|.||++++..+++ .+.+|.||.+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVE-ADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEE-ECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 89999999999999999854 567999887665432 78854 2345668999999999997 34589999999865
Q ss_pred ccc-cc--ceeeEEEeCCCCCCCCCCCCCCceeeeeeccccCChHHHHH-Hh--hh---cCCCC----------------
Q 047497 138 WLR-ST--LYGPIIILPKRGIPYPFTKPYKEVPIIFGEWFKADPETIIS-QA--LQ---TGGGP---------------- 192 (580)
Q Consensus 138 ~~~-~G--l~G~liV~~~~~~~~~~~~~d~e~~l~~~d~~~~~~~~~~~-~~--~~---~~~~~---------------- 192 (580)
... .. ..+.|-.........+... ....+ .| ++...... .. .. ....+
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~-~p~~p----~~--~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~ 356 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSP-PPQTP----AW--DDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVI 356 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSC-CCCCC----CT--TCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEEEE
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCC-CCCCC----cc--ccccccccccccccccCCCCCCCCCCcEEEEEEEeeccC
Confidence 321 11 2233333322210000000 00000 00 00000000 00 00 00000
Q ss_pred CCCCeEEEcCCCCCC-----------------------------CCCCC--------CceeEEEEeCCCEEEEEEEecCC
Q 047497 193 NVSDAYTINGLPGPL-----------------------------YNCSA--------KDTFKLKVKPGKTYLLRLINAAL 235 (580)
Q Consensus 193 ~~~~~~liNG~~~~~-----------------------------~~~~~--------~~~~~l~v~~G~~~rlRliN~~~ 235 (580)
.....+.|||+.+.. ++... .....+.++.|++++|.|.|.+.
T Consensus 357 ~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~ 436 (552)
T 1aoz_A 357 NGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANM 436 (552)
T ss_dssp TTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCC
T ss_pred CCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcc
Confidence 001236677764311 00000 01235889999999999999875
Q ss_pred -----CCeEEEEEcCceeeEEecC-CCc----------CCceEEeEEEeCCCceEEEEEEcCCCCCCceEEEEeccc
Q 047497 236 -----NDELFFSIANHTLTVVEAD-AIY----------VKPFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPY 296 (580)
Q Consensus 236 -----~~~~~~~i~gh~~~via~D-G~~----------v~P~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~ 296 (580)
...+.||||||.|+|++.. |.+ ..|...|++.|.+|+.+.|.++++++ |.|.++||-.
T Consensus 437 ~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNP---G~W~~HCHi~ 510 (552)
T 1aoz_A 437 MKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNP---GVWAFHCHIE 510 (552)
T ss_dssp SSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSC---EEEEEEESSH
T ss_pred cccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcCCC---eEEEEEeeeh
Confidence 3468899999999999984 552 36889999999999999999999998 9999999953
No 65
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.43 E-value=5.3e-13 Score=113.83 Aligned_cols=105 Identities=18% Similarity=0.147 Sum_probs=80.3
Q ss_pred EEEEEEEEEEee-----ecCCceeEE-EEECCCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCc
Q 047497 33 RHYKFDIKLQNV-----TRLCNTKSI-ISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYI 106 (580)
Q Consensus 33 ~~~~l~~~~~~~-----~~~g~~~~~-~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 106 (580)
++|.+.+.+... ..+|..... .+||++++++.|++++||+|+++++|.... +||+..+. .|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~----~~~--- 69 (112)
T 1iby_A 2 HNFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDA----FGV--- 69 (112)
T ss_dssp CCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGG----GTE---
T ss_pred CceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcC----CCc---
Confidence 345555555333 234555445 589999999999999999999999999865 55555442 122
Q ss_pred cccccCCCCeEEEEEEECCCccceeEeeCcccccccceeeEEEeC
Q 047497 107 TQCPIQTGQSYVYNFTIVGQRGTLWWHAHLSWLRSTLYGPIIILP 151 (580)
Q Consensus 107 tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 151 (580)
+..+.||++++|.|++ +++|+||||||.+....+|.|.|+|.+
T Consensus 70 -~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~~M~g~i~V~~ 112 (112)
T 1iby_A 70 -QEVIKAGETKTISFTA-DKAGAFTIWCQLHPKNIHLPGTLNVVE 112 (112)
T ss_dssp -EEEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTTBCCEEEEEEC
T ss_pred -eeEeCCCCEEEEEEEC-CCCEEEEEECCCCCchHHCEEEEEEeC
Confidence 3679999999999996 899999999998876666999999974
No 66
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.42 E-value=2.6e-12 Score=136.39 Aligned_cols=213 Identities=13% Similarity=0.092 Sum_probs=144.2
Q ss_pred ceeEEEEECCCCCCcEEEEecCCEEEEEEEecCC-CCceEEe--cC---CccCCCCCCCCCCC-----ccccccCCCCeE
Q 047497 49 NTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQ-NNISIHW--HG---IRQLRSGWADGPAY-----ITQCPIQTGQSY 117 (580)
Q Consensus 49 ~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~~iH~--HG---~~~~~~~~~DGv~~-----~tq~~i~PG~~~ 117 (580)
.....+++||+. .|+|+|++| ++++||.|... ....+|+ +| ...... ..||.+- +....|.|||++
T Consensus 167 ~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~vi-a~DG~~~~~P~~~~~l~l~pgeR~ 243 (448)
T 3aw5_A 167 FLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLI-AVDQGFLARPIEVRALFLAPAERA 243 (448)
T ss_dssp CCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEE-EETTEEEEEEEEESCEEECTTCEE
T ss_pred ccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEE-EeCCCccCCceEeceEEECCcceE
Confidence 345689999997 599999999 99999999985 4567999 77 433322 2788641 344668999999
Q ss_pred EEEEEECCCccceeEeeCccccc-c---cc----------eee--EEEeCCCCC--CCCC---C----CCCCceeeeeec
Q 047497 118 VYNFTIVGQRGTLWWHAHLSWLR-S---TL----------YGP--IIILPKRGI--PYPF---T----KPYKEVPIIFGE 172 (580)
Q Consensus 118 ~Y~f~~~~~~Gt~wYH~H~~~~~-~---Gl----------~G~--liV~~~~~~--~~~~---~----~~d~e~~l~~~d 172 (580)
+..+++ . .|.||..++..... . ++ ... |.+..+... +..+ + ....+..+.+..
T Consensus 244 dvlv~~-~-~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~L~~lp~~~~~~~~~~~~~l~~ 321 (448)
T 3aw5_A 244 EVVVEL-G-EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVPVEALSDPPPEPPKPTRTRRFALSL 321 (448)
T ss_dssp EEEEEE-C-SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCCCCCCSCCCCCCCCCSEEEEEEEEE
T ss_pred EEEEEC-C-CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCCccccCCCCCCCCCCCceEEEEEeC
Confidence 999998 4 47899988753211 0 01 111 222121110 0000 0 001111111110
Q ss_pred cccCChHHHHHHhhhcCCCCCCCCeEEEcCCCCCCCCCCCCceeEEE-EeCCCEEEEEEEecCCCCeEEEEEcCceeeEE
Q 047497 173 WFKADPETIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLK-VKPGKTYLLRLINAALNDELFFSIANHTLTVV 251 (580)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~-v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi 251 (580)
+ ...++|||+.+.. ..+.+. ++.|++++|+|.|.+....+.||||||.|+|+
T Consensus 322 ----------------~-----~~~~~iNg~~~~~------~~p~~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl 374 (448)
T 3aw5_A 322 ----------------S-----GMQWTINGMFWNA------SNPLFEHVSVEGVELWEIVNDKASMPHPMHLHGFPMWII 374 (448)
T ss_dssp ----------------E-----TTEEEETTBCCCT------TCTTCCCEEECEEEEEEEEECSSSCCEEEEESSSCBEEE
T ss_pred ----------------C-----CceeeECCCcCCC------CCCceeccCCCCeEEEEEEcCCCCCCcCEEECCceEEEE
Confidence 0 1248899998642 234466 89999999999999845567899999999999
Q ss_pred ecCCCcC------------Cc---eEEeEEEeCCCceEEEEEEcC---CCCCCceEEEEeccc
Q 047497 252 EADAIYV------------KP---FETETLLIAPGQTTNVLLKTK---PHYPSATFFMKARPY 296 (580)
Q Consensus 252 a~DG~~v------------~P---~~~d~l~l~pGeR~dv~v~~~---~~~~~g~y~i~~~~~ 296 (580)
+.+|... .| ...|++.+.||+++.|.+++. .. ..|.++||-.
T Consensus 375 ~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~ad---npw~~HCHil 434 (448)
T 3aw5_A 375 ERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRG---QLFPFHCHNL 434 (448)
T ss_dssp EEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTT---CEEEEEESSH
T ss_pred EecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCC---CcEEEEcCCh
Confidence 9999764 23 589999999999999998887 54 3399999953
No 67
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.42 E-value=1.9e-11 Score=133.28 Aligned_cols=241 Identities=10% Similarity=0.078 Sum_probs=148.3
Q ss_pred eEEEEECCCCC--------CcEEEEecCCEEEEEEEecCCC-CceEEecCCccCCCCCCCCCC----CccccccCCCCeE
Q 047497 51 KSIISVNGKFP--------GPRIVAREGDQLLIKVMNHVQN-NISIHWHGIRQLRSGWADGPA----YITQCPIQTGQSY 117 (580)
Q Consensus 51 ~~~~~~Ng~~p--------gP~i~v~~Gd~v~v~l~N~l~~-~~~iH~HG~~~~~~~~~DGv~----~~tq~~i~PG~~~ 117 (580)
...++|||+.. -|+|+|++|+++++||.|.... ...+|++|....... .||.+ .+....|.||+++
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIA-ADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEe-cCCcccCceEeCeEEEccEEEE
Confidence 46789999873 3799999999999999999855 567999988665432 78875 2445668999999
Q ss_pred EEEEEECCCccceeEeeCc--ccc---c-cc-ceeeEEEeCCCCCCCCCCC----CC----Cc---eeeeeeccccCC-h
Q 047497 118 VYNFTIVGQRGTLWWHAHL--SWL---R-ST-LYGPIIILPKRGIPYPFTK----PY----KE---VPIIFGEWFKAD-P 178 (580)
Q Consensus 118 ~Y~f~~~~~~Gt~wYH~H~--~~~---~-~G-l~G~liV~~~~~~~~~~~~----~d----~e---~~l~~~d~~~~~-~ 178 (580)
+..+++...+|.||..... ... . .. ..+.|....... ..|... .+ .+ .++.-.+.-... .
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~-~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~ 352 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPG-GLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFV 352 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCC-SCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCC-CCCCCCCCcCCCcccccccccccCCCCCCCCcccc
Confidence 9999985558999999875 211 1 11 123333322211 111100 00 00 000000000000 0
Q ss_pred HHHHHHh-hhcCCCCCCCCeEEEcCCCCCCCCCCC-------------CceeEEEEeCCCEEEEEEEecCC----CCeEE
Q 047497 179 ETIISQA-LQTGGGPNVSDAYTINGLPGPLYNCSA-------------KDTFKLKVKPGKTYLLRLINAAL----NDELF 240 (580)
Q Consensus 179 ~~~~~~~-~~~~~~~~~~~~~liNG~~~~~~~~~~-------------~~~~~l~v~~G~~~rlRliN~~~----~~~~~ 240 (580)
....... ............+.|||+.+....... .....+.+..++.+++.++|... ...+.
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP 432 (559)
T 2q9o_A 353 KRPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHP 432 (559)
T ss_dssp CCGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEE
T ss_pred cceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCc
Confidence 0000000 000000112246889999763210000 01235777777666666666643 56788
Q ss_pred EEEcCceeeEEecCC---------Cc------------CCceEEeEEEeCCCceEEEEEEcCCCCCCceEEEEeccc
Q 047497 241 FSIANHTLTVVEADA---------IY------------VKPFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPY 296 (580)
Q Consensus 241 ~~i~gh~~~via~DG---------~~------------v~P~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~ 296 (580)
||||||.|+|++.++ .. ..|...|++.|.+|+++.|.++++++ |.|.++||-.
T Consensus 433 ~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNP---G~W~~HCHil 506 (559)
T 2q9o_A 433 MHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNP---GAWLFHCHIA 506 (559)
T ss_dssp EEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSC---EEEEEEECCH
T ss_pred EEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCC---eeEEEEecch
Confidence 999999999999986 22 14778999999999999999999998 9999999963
No 68
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.41 E-value=1.1e-11 Score=135.29 Aligned_cols=232 Identities=13% Similarity=0.095 Sum_probs=145.7
Q ss_pred eeEEEEECCCCCCcEEEEecCCEEEEEEEecCC-CCceEEecCC-------ccCCCCCCCCCCC-----cc------ccc
Q 047497 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQ-NNISIHWHGI-------RQLRSGWADGPAY-----IT------QCP 110 (580)
Q Consensus 50 ~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~-------~~~~~~~~DGv~~-----~t------q~~ 110 (580)
....+++||+. .|.|.|++| ++++||.|... ....+++.|. ..... ..||.+- +. ...
T Consensus 253 ~gd~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vI-a~DG~~l~~P~~~~~~~~~~~l~ 329 (612)
T 2g23_A 253 FGPYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQI-GSDGGLLPRPVPVDFDDTLPVLS 329 (612)
T ss_dssp CCSEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEE-EETTEEEEEEEEECSSSSSSSEE
T ss_pred cCCEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEE-EeCCeEccCCEEecccCcccEEE
Confidence 34678999996 699999999 99999999984 5567888664 11111 2788541 33 567
Q ss_pred cCCCCeEEEEEEECCCcc-ceeEeeCccccccc-----------ceeeEEEeCCC-CCCCCCCCC----------C---C
Q 047497 111 IQTGQSYVYNFTIVGQRG-TLWWHAHLSWLRST-----------LYGPIIILPKR-GIPYPFTKP----------Y---K 164 (580)
Q Consensus 111 i~PG~~~~Y~f~~~~~~G-t~wYH~H~~~~~~G-----------l~G~liV~~~~-~~~~~~~~~----------d---~ 164 (580)
|.|||+++.-+++.+.+| +++...-......| ..--|.|..+. ......+.. + .
T Consensus 330 l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~~ 409 (612)
T 2g23_A 330 AAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHG 409 (612)
T ss_dssp ECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCE
T ss_pred ECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccccc
Confidence 899999999999865567 46666553211111 11124454332 111111110 0 0
Q ss_pred ceeeeee------------ccccCC---hHHHHHHhhhcC-----CCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCC
Q 047497 165 EVPIIFG------------EWFKAD---PETIISQALQTG-----GGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGK 224 (580)
Q Consensus 165 e~~l~~~------------d~~~~~---~~~~~~~~~~~~-----~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~ 224 (580)
...+++. -|.... ...+ .....+ ........+.|||+.+. ..+.++++.|+
T Consensus 410 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~iNG~~~~-------~~~~~~v~~G~ 480 (612)
T 2g23_A 410 HRLIVLTPPGTKGSGGHPEIWEMAEVEDPADV--QVPAEGVIQVTGADGRTKTYRRTAATFN-------DGLGFTIGEGT 480 (612)
T ss_dssp EEEEEECCTTCTTSTTCCCEEEEEEEC-------CCSCTTEEEEECTTSCEEEEEEEECSTT-------SCCCEEEETTC
T ss_pred eeEEeeccccccccccccceeecccccccccc--ccccccceeeeccCCceeEEEECCccCC-------CCCceEecCCC
Confidence 1112221 010000 0000 000000 00011246889999763 34789999999
Q ss_pred EEEEEEEecCCCCeEEEEEcCceeeEEecCCC------------------------cC---CceEEeEEEeCCCceEEEE
Q 047497 225 TYLLRLINAALNDELFFSIANHTLTVVEADAI------------------------YV---KPFETETLLIAPGQTTNVL 277 (580)
Q Consensus 225 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~------------------------~v---~P~~~d~l~l~pGeR~dv~ 277 (580)
+++|+|+|.+ ...+.||||||.|+|++.+|. .. ++.+.|++.|.||+++.|.
T Consensus 481 ~v~w~l~N~~-~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~ 559 (612)
T 2g23_A 481 HEQWTFLNLS-PILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVM 559 (612)
T ss_dssp EEEEEEEECS-SSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEE
T ss_pred EEEEEEEeCC-CCCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEE
Confidence 9999999998 456789999999999987531 11 3347999999999999999
Q ss_pred EEcC-CCCCCceEEEEecccc
Q 047497 278 LKTK-PHYPSATFFMKARPYV 297 (580)
Q Consensus 278 v~~~-~~~~~g~y~i~~~~~~ 297 (580)
++++ .+ |.|.++||...
T Consensus 560 ~~~~~~p---G~w~~HCHil~ 577 (612)
T 2g23_A 560 GKFDGAY---GRFMYHCHLLE 577 (612)
T ss_dssp EECCSCC---EEEEEEESSHH
T ss_pred EEeCCCC---ccEEEEeCchh
Confidence 9999 55 99999999643
No 69
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.39 E-value=9.4e-13 Score=118.45 Aligned_cols=99 Identities=14% Similarity=0.157 Sum_probs=72.1
Q ss_pred CCceeEEEEECCCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCC------CCCcc-ccccCCCC--eE
Q 047497 47 LCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADG------PAYIT-QCPIQTGQ--SY 117 (580)
Q Consensus 47 ~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG------v~~~t-q~~i~PG~--~~ 117 (580)
-++....+.++|. ++|+|+|++||+|+|+++|... ...|.+.+...+..+.+. .++.. ...|.||+ +.
T Consensus 46 ~~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~ 122 (154)
T 2cal_A 46 PGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYT 122 (154)
T ss_dssp TTSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEE
T ss_pred cCCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEE
Confidence 3455556777777 6799999999999999999743 345666666544433221 00000 02689999 99
Q ss_pred EEEEEECCCccceeEeeCccccc-ccceeeEEEe
Q 047497 118 VYNFTIVGQRGTLWWHAHLSWLR-STLYGPIIIL 150 (580)
Q Consensus 118 ~Y~f~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~ 150 (580)
+|.|+ . ++|+||||||..++. +||+|.|+|+
T Consensus 123 t~tft-~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 123 DFTWH-P-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEEC-C-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEE-E-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 99999 4 899999999987666 8999999985
No 70
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.31 E-value=2.4e-11 Score=131.48 Aligned_cols=226 Identities=14% Similarity=0.121 Sum_probs=140.2
Q ss_pred eEEEEECCCCCCcEEEEecCCEEEEEEEecCCC-CceEEecC-------CccCCCCCCCCCC-----CccccccCCCCeE
Q 047497 51 KSIISVNGKFPGPRIVAREGDQLLIKVMNHVQN-NISIHWHG-------IRQLRSGWADGPA-----YITQCPIQTGQSY 117 (580)
Q Consensus 51 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~-~~~iH~HG-------~~~~~~~~~DGv~-----~~tq~~i~PG~~~ 117 (580)
...+++||+. .|.|.|+.| ++++||.|.... ...++++| ...... ..||.. .+....|.|||++
T Consensus 201 gd~~lvNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vI-a~DG~~~~~P~~~~~l~l~pgeR~ 277 (534)
T 3abg_A 201 GDVIHVNGQP-WPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVI-ASDSGLLEHPADTSLLYISMAERY 277 (534)
T ss_dssp CSEEEETTEE-SCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEE-EETTEEEEEEEEESCEEECTTCEE
T ss_pred CceeccCCcc-CceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccEEEE-EeCCCcccCceEeceEEECCccEE
Confidence 5679999985 799999985 999999999854 45789876 222221 278752 2455678999999
Q ss_pred EEEEEECCCcc-ceeEeeCcccc--------cccceeeEEEeCCCCC----CCCCCCCCCceeeeeeccccCChHHHHHH
Q 047497 118 VYNFTIVGQRG-TLWWHAHLSWL--------RSTLYGPIIILPKRGI----PYPFTKPYKEVPIIFGEWFKADPETIISQ 184 (580)
Q Consensus 118 ~Y~f~~~~~~G-t~wYH~H~~~~--------~~Gl~G~liV~~~~~~----~~~~~~~d~e~~l~~~d~~~~~~~~~~~~ 184 (580)
+..+++...+| +||........ .....+.+-....... ....+....... ..+-..... .
T Consensus 278 dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P~~L~~~~--~p~~~~~~~-----~ 350 (534)
T 3abg_A 278 EVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVPANLRDVP--FPSPTTNTP-----R 350 (534)
T ss_dssp EEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCCCCCCCCS--CCCCCCCCC-----E
T ss_pred EEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCccccccCC--CCCCccccc-----e
Confidence 99999755478 58876632110 0011122222211110 000000000000 000000000 0
Q ss_pred hhhcCCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEec-CCC---cCCc
Q 047497 185 ALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEA-DAI---YVKP 260 (580)
Q Consensus 185 ~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~-DG~---~v~P 260 (580)
....+ .....++|||+.+... .....+.++.|++++|.|.|.+....+.||||||.|+|++. +|. ...+
T Consensus 351 ~~~~~---~~~~~w~iNG~~f~~~----~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~ 423 (534)
T 3abg_A 351 QFRFG---RTGPTWTINGVAFADV----QNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMP 423 (534)
T ss_dssp EEECS---CCCSTTCCCCBTTBCT----TSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCCS
T ss_pred EEEEe---ccCceeEECCcccCCC----CCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCCc
Confidence 00000 0112467999875311 11234678999999999999986667889999999999998 663 2222
Q ss_pred ---eEEeEEEeCCCceEEEEEE-cCCCCCCceEEEEeccc
Q 047497 261 ---FETETLLIAPGQTTNVLLK-TKPHYPSATFFMKARPY 296 (580)
Q Consensus 261 ---~~~d~l~l~pGeR~dv~v~-~~~~~~~g~y~i~~~~~ 296 (580)
...|++.|.||+++.|.+. ++++ |.|.++||-.
T Consensus 424 ~~~~~rDTV~v~pg~~v~I~~~~adnp---G~w~~HCHil 460 (534)
T 3abg_A 424 YESGLKDVVWLGRRETVVVEAHYAPFP---GVYMFHCHNL 460 (534)
T ss_dssp GGGSCBSEECCCSSEEEEEEEECCSCC---EEEEEEESCH
T ss_pred cccCCcCeEEcCCCCEEEEEEEECCCC---ccEEEecChH
Confidence 4689999999999999998 6776 9999999964
No 71
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.30 E-value=1.1e-11 Score=134.13 Aligned_cols=217 Identities=12% Similarity=0.054 Sum_probs=139.2
Q ss_pred eeEEEEECCCCCCcEEEEecCCEEEEEEEecCCC-CceEEecCC-ccCCCCCCCCCC-----CccccccCCCCeEEEEEE
Q 047497 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQN-NISIHWHGI-RQLRSGWADGPA-----YITQCPIQTGQSYVYNFT 122 (580)
Q Consensus 50 ~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~-~~~iH~HG~-~~~~~~~~DGv~-----~~tq~~i~PG~~~~Y~f~ 122 (580)
....+++||+. .|.|.++.| ++++||.|.... ...+|++|. ..... ..||.+ .+....|.|||+++..++
T Consensus 229 ~~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~vi-a~DG~~~~~P~~~~~l~l~pgeR~dvlv~ 305 (513)
T 2wsd_A 229 CGETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQI-GSDGGLLPRSVKLNSFSLAPAERYDIIID 305 (513)
T ss_dssp CCSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEEE-EETTEEEEEEEEESEEEECTTCEEEEEEE
T ss_pred ccceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEEE-ccCCCcccCceEeCeEEECCeeeEEEEEE
Confidence 34679999997 699999885 999999999855 567999876 43332 279843 144567899999999999
Q ss_pred ECCCccceeEeeCcccc----c-ccc-eeeEEEeCCC--CCC--CCCCCCC------------CceeeeeeccccCChHH
Q 047497 123 IVGQRGTLWWHAHLSWL----R-STL-YGPIIILPKR--GIP--YPFTKPY------------KEVPIIFGEWFKADPET 180 (580)
Q Consensus 123 ~~~~~Gt~wYH~H~~~~----~-~Gl-~G~liV~~~~--~~~--~~~~~~d------------~e~~l~~~d~~~~~~~~ 180 (580)
+...+|. ||.-..... . .+. ...+-..... ..+ ...+... .+..+.+...
T Consensus 306 ~~~~~g~-~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~------- 377 (513)
T 2wsd_A 306 FTAYEGE-SIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGT------- 377 (513)
T ss_dssp CGGGTTC-EEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEE-------
T ss_pred CCCCCCc-EEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEee-------
Confidence 7544676 333221110 0 011 1222222111 000 0011000 0111111100
Q ss_pred HHHHhhhcCCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEecCCC----
Q 047497 181 IISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAI---- 256 (580)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~---- 256 (580)
........++|||+.+. ....+.++.|++++|+|.|.+. ..+.||||||.|+|++.+|.
T Consensus 378 ---------~~~~g~~~~~iNg~~~~-------~~~~~~~~~g~~~~w~l~N~~~-~~HP~HlHG~~F~Vl~~~~~~~~~ 440 (513)
T 2wsd_A 378 ---------QDEYGRPVLLLNNKRWH-------DPVTETPKVGTTEIWSIINPTR-GTHPIHLHLVSFRVLDRRPFDIAR 440 (513)
T ss_dssp ---------ECTTSCEEEEETTBCTT-------SCCCBCCBTTCEEEEEEEECSS-SCEEEEESSCCEEEEEEEEBCHHH
T ss_pred ---------cCCCCCceEeECCccCC-------CcccEecCCCCEEEEEEEcCCC-CCcCEeEeCceEEEEEecCccccc
Confidence 00001135679999763 2245688999999999999984 46789999999999998751
Q ss_pred -----------cC------CceEEeEEEeCCCceEEEEEEcCCCCCCceEEEEeccc
Q 047497 257 -----------YV------KPFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPY 296 (580)
Q Consensus 257 -----------~v------~P~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~ 296 (580)
+. ++...|++.|.||+++.|.++++..+ |.|.++||..
T Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnp--G~w~~HCHil 495 (513)
T 2wsd_A 441 YQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYS--GRYVWHCHAL 495 (513)
T ss_dssp HHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCC--EEEEEEESCH
T ss_pred ccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCC--CCEEEEcCCh
Confidence 10 23589999999999999999995433 9999999964
No 72
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.29 E-value=4.4e-12 Score=136.53 Aligned_cols=96 Identities=19% Similarity=0.231 Sum_probs=75.8
Q ss_pred CCceeEEEEECCCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCccccccCCCCeEEEEEEECCC
Q 047497 47 LCNTKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNFTIVGQ 126 (580)
Q Consensus 47 ~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~f~~~~~ 126 (580)
++....+|++|++||+|.|+|++||+|+++|+|.+...-. +||+.++. .|+ +..|.||++++|.|++ ++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv----~~~i~PG~t~t~~Fta-~~ 565 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV----AMEIGPQMTSSVTFVA-AN 565 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE----EEEECTTCEEEEEEEC-CS
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc----ceeeCCCCeEEEEEEC-CC
Confidence 3467889999999999999999999999999998753211 46665543 233 2679999999999996 89
Q ss_pred ccceeEeeCcc-cc-cccceeeEEEeCCC
Q 047497 127 RGTLWWHAHLS-WL-RSTLYGPIIILPKR 153 (580)
Q Consensus 127 ~Gt~wYH~H~~-~~-~~Gl~G~liV~~~~ 153 (580)
+|+||||||.. +. -.||.|.|+|++++
T Consensus 566 pGtY~yhC~e~Cg~~H~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHMEMRGRMLVEPKE 594 (595)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEECC-
T ss_pred CEEEEEECCCCCCCCccCCEEEEEEEcCC
Confidence 99999999942 21 25999999999764
No 73
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.21 E-value=5.6e-11 Score=99.87 Aligned_cols=79 Identities=19% Similarity=0.289 Sum_probs=64.1
Q ss_pred CCCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCccccccCCCCeEEEEEEECCCccceeEeeCc
Q 047497 57 NGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAHL 136 (580)
Q Consensus 57 Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~ 136 (580)
+..|..+.|++++||+|+ ++|..+.++++|+++. +||.....+..|.||++++|.| +++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~--~~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVT--WINREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEE--EEECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEE--EEECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 556667999999999964 5699888999999862 3565444555689999999888 479999999998
Q ss_pred ccccccceeeEEEe
Q 047497 137 SWLRSTLYGPIIIL 150 (580)
Q Consensus 137 ~~~~~Gl~G~liV~ 150 (580)
|. ||.|.|+|+
T Consensus 95 H~---gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP---FMRGKVVVE 105 (105)
T ss_dssp CT---TCEEEEEEC
T ss_pred CC---CCEEEEEEC
Confidence 76 999999985
No 74
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.14 E-value=4.6e-09 Score=114.05 Aligned_cols=238 Identities=10% Similarity=0.039 Sum_probs=145.4
Q ss_pred eEEEEECCCCC----------------CcEEEEecCCEEEEEEEecCCC-CceEEecCCccCCCCCCCCCC----Ccccc
Q 047497 51 KSIISVNGKFP----------------GPRIVAREGDQLLIKVMNHVQN-NISIHWHGIRQLRSGWADGPA----YITQC 109 (580)
Q Consensus 51 ~~~~~~Ng~~p----------------gP~i~v~~Gd~v~v~l~N~l~~-~~~iH~HG~~~~~~~~~DGv~----~~tq~ 109 (580)
...+++||+.. .++|.|++|+++++||.|.... ...+|++|....... .||.+ .+...
T Consensus 225 ~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa-~DG~~v~P~~~~~l 303 (580)
T 3sqr_A 225 LENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIA-NDLVPIVPYTTDTL 303 (580)
T ss_dssp BSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESSE
T ss_pred CceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEE-eCCccCCceEeeEE
Confidence 45688999742 3799999999999999999854 457899888765533 78865 23446
Q ss_pred ccCCCCeEEEEEEECCCccceeEeeCcccc-----cccceeeEEEeCCCCCCCCCCCCCCcee-eeeec--cccCC--hH
Q 047497 110 PIQTGQSYVYNFTIVGQRGTLWWHAHLSWL-----RSTLYGPIIILPKRGIPYPFTKPYKEVP-IIFGE--WFKAD--PE 179 (580)
Q Consensus 110 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~-----~~Gl~G~liV~~~~~~~~~~~~~d~e~~-l~~~d--~~~~~--~~ 179 (580)
.|.|||+++..+++.+.+|.||........ ..+..-+|+.........|.... .+.. ..+.+ ..... ..
T Consensus 304 ~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~P~~~~-~~~~~~~~~~~~~~L~P~~~~ 382 (580)
T 3sqr_A 304 LIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVG-TTPRGTCEDEPVASLVPHLAL 382 (580)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCCCCCCC-CCCCCCSCCSCGGGCCBSSCC
T ss_pred EEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCCCCCCC-CCccchhhcccccccccCCCC
Confidence 689999999999986668999999876431 11122233333221111111000 0000 00000 00000 00
Q ss_pred HHHHHh-----hhcCCCCCCCCeEEEcCCCCCC-CCC-------CC-----CceeEEEE----eCCCEEEEEEEecCC-C
Q 047497 180 TIISQA-----LQTGGGPNVSDAYTINGLPGPL-YNC-------SA-----KDTFKLKV----KPGKTYLLRLINAAL-N 236 (580)
Q Consensus 180 ~~~~~~-----~~~~~~~~~~~~~liNG~~~~~-~~~-------~~-----~~~~~l~v----~~G~~~rlRliN~~~-~ 236 (580)
.+.... ..-+ ....-.+.|||..+.. ... ++ ...-.+.+ +.|+++.|.|-|.+. .
T Consensus 383 ~~~~~~~~~~~l~~~--~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~~ 460 (580)
T 3sqr_A 383 DVGGYSLVDEQVSSA--FTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGFG 460 (580)
T ss_dssp BCCSEEEEEEEEEEE--ESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSSC
T ss_pred CCCCccceEEEEEec--cCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCccc
Confidence 000000 0000 0011246788876521 000 00 01112334 359999999999872 2
Q ss_pred CeEEEEEcCceeeEEecCCC------------cCCceEEeEEEeCCCceEEEEEEcCCCCCCceEEEEecc
Q 047497 237 DELFFSIANHTLTVVEADAI------------YVKPFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARP 295 (580)
Q Consensus 237 ~~~~~~i~gh~~~via~DG~------------~v~P~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~ 295 (580)
..+.||||||.|+|++.+.. +..|...|++.+.+|+.+.+.++++++ |.|.++||-
T Consensus 461 ~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNP---G~W~~HCHi 528 (580)
T 3sqr_A 461 IWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNP---GSWLLHCHI 528 (580)
T ss_dssp CCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSC---EEEEEEECS
T ss_pred cceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCC---eeeEEEECc
Confidence 46789999999999988432 235889999999999999999999999 999999995
No 75
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.13 E-value=6e-11 Score=105.15 Aligned_cols=94 Identities=16% Similarity=0.165 Sum_probs=71.0
Q ss_pred EEEecCCCEEEEEEecCCCCCCC-CCCccccCCcEEEEE------eccC---cCCCCCCCCCCCCCCCCccceEeeCCCc
Q 047497 457 LVVLPFNSSVELIMQDTSILGAE-SHPLHLHGFNFFVVG------QGFG---NFDPNKDPTKFNLVDPVERNTVGVPSGG 526 (580)
Q Consensus 457 ~~~v~~g~~v~~vi~n~~~~~~~-~HP~HlHG~~F~Vl~------~g~g---~~~~~~~~~~~~~~~p~~rDTv~vp~g~ 526 (580)
.+.++.|++|+|++.|.+ .. .|.||+|+....+.. ...+ .+.+.. ....++||..|.||+
T Consensus 36 ~i~v~~G~~V~~~~~N~~---~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~-------~~~~~~~t~~l~pGe 105 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNS---AVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPAD-------KSNIIAESPLANGNE 105 (139)
T ss_dssp EEEECTTCEEEEEEECCC---SSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSC-------CTTEEEECCCBCTTC
T ss_pred eEEECCCCEEEEEEEeCC---CCCCeeEEEeccccccchhhhhhhhcccccccccCcc-------cccccccccccCCCC
Confidence 478899999999999965 35 899999986431100 0000 111110 123578999999999
Q ss_pred EEEEEEEecCceeEEEEeechhhhhccceEEEEEe
Q 047497 527 WVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVL 561 (580)
Q Consensus 527 ~v~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~ 561 (580)
...|.|.+++||.|.||||+..|.+ ||+..|.|+
T Consensus 106 t~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 106 TVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 9999999999999999999999999 999999883
No 76
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.08 E-value=2.1e-10 Score=96.37 Aligned_cols=84 Identities=14% Similarity=0.144 Sum_probs=64.8
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEe-c
Q 047497 457 LVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLA-D 535 (580)
Q Consensus 457 ~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~a-d 535 (580)
.+.++.|++|+|+ |.. ...|+||+||..+... . |. + .+....++..+.||+...++|.+ +
T Consensus 20 ~i~v~~Gd~V~~~--N~~---~~~H~v~~~~~~~~~~-~--g~-~----------~~~~~~~~~~i~pG~~~~~~f~~~~ 80 (105)
T 3cvb_A 20 NVTVHPGDTVKWV--NNK---LPPHNILFDDKQVPGA-S--KE-L----------ADKLSHSQLMFSPGESYEITFSSDF 80 (105)
T ss_dssp EEEECTTEEEEEE--ECS---SCCEEEEECTTSSGGG-C--HH-H----------HHHHCEEEEECSTTCEEEEEECTTS
T ss_pred EEEEcCCCEEEEE--ECC---CCCCeEEEeCCCCCcc-c--cc-c----------cccccccccccCCCCeEEEEEecCC
Confidence 5788999999874 543 4789999999866331 0 00 0 00112578899999999999998 7
Q ss_pred CceeEEEEeechhhhhccceEEEEEe
Q 047497 536 NPGVWFMHCHLEVHTSWGLKMAWIVL 561 (580)
Q Consensus 536 npG~wl~HCHil~H~d~GM~~~~~V~ 561 (580)
.||.|.|||| .|...||++.|.|.
T Consensus 81 ~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 81 PAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp CSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCeeEEEEeC--CchhcCCEEEEEEc
Confidence 9999999999 79999999999985
No 77
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.99 E-value=1e-09 Score=92.31 Aligned_cols=84 Identities=13% Similarity=0.152 Sum_probs=62.0
Q ss_pred CcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCC----CccccccCCCCeEEEEEEECCCccceeEeeCcc
Q 047497 62 GPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPA----YITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLS 137 (580)
Q Consensus 62 gP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~----~~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 137 (580)
.+.|++++||+|+ ++|....++++|+|+...+. .+|.. .-+...+.||++++|.|++++.+|+|||||| .
T Consensus 19 P~~i~v~~Gd~V~--~~n~~~~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~-~ 92 (106)
T 2gim_A 19 PAKLTIKPGDTVE--FLNNKVPPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE-P 92 (106)
T ss_dssp SSEEEECTTCEEE--EEECSSSCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT-T
T ss_pred CCEEEECCCCEEE--EEECCCCCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC-C
Confidence 4799999999865 45887778999998865432 12210 0112458999999999985478999999999 2
Q ss_pred cccccceeeEEEeC
Q 047497 138 WLRSTLYGPIIILP 151 (580)
Q Consensus 138 ~~~~Gl~G~liV~~ 151 (580)
...+||.|.|+|.+
T Consensus 93 H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 93 HRGAGMVGKITVAG 106 (106)
T ss_dssp TGGGTCEEEEEECC
T ss_pred hhhcCcEEEEEEcC
Confidence 23469999999963
No 78
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=98.98 E-value=1.8e-08 Score=111.58 Aligned_cols=233 Identities=11% Similarity=0.050 Sum_probs=133.6
Q ss_pred eeEEEEECCCCCCcEEEEecCCEEEEEEEecCC-CCceEEecCC---------ccCCCCCCCCCC-----------Cccc
Q 047497 50 TKSIISVNGKFPGPRIVAREGDQLLIKVMNHVQ-NNISIHWHGI---------RQLRSGWADGPA-----------YITQ 108 (580)
Q Consensus 50 ~~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~---------~~~~~~~~DGv~-----------~~tq 108 (580)
....+++||+. -|.+.++. .++++||.|... ....+.+-|. .+.. .||.. .++.
T Consensus 253 ~gd~~~vNG~~-~p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa---~DG~~l~~Pv~v~~p~~~~~ 327 (612)
T 3gyr_A 253 FGPYTTVNGRI-WPYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIG---SDGGLLPRPVPVDFDDTLPV 327 (612)
T ss_dssp CCSEEEETTEE-SCEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEE---ETTEEEEEEEEECSSSSSSS
T ss_pred cCceeeecCCc-cceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEE---eCCCccccceeccCcccccE
Confidence 34678999986 69998865 589999999874 3445555443 2222 68832 1234
Q ss_pred cccCCCCeEEEEEEECCCccceeEeeCccccc--------ccc--ee--eEEEeCCCCC-CCCCCC--------C----C
Q 047497 109 CPIQTGQSYVYNFTIVGQRGTLWWHAHLSWLR--------STL--YG--PIIILPKRGI-PYPFTK--------P----Y 163 (580)
Q Consensus 109 ~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~--------~Gl--~G--~liV~~~~~~-~~~~~~--------~----d 163 (580)
..|.|||+++.-+++.+.+|.+|+-....... .+. .. .+.+...... ....+. . .
T Consensus 328 l~i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 407 (612)
T 3gyr_A 328 LSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIP 407 (612)
T ss_dssp EEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSC
T ss_pred EEeccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCcccccccccccccccccccc
Confidence 67899999999999855566555543221110 111 11 1222221110 000000 0 0
Q ss_pred Cc-eeeeeeccccCCh-------------HHHHHHhh-----hcCCCCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCC
Q 047497 164 KE-VPIIFGEWFKADP-------------ETIISQAL-----QTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGK 224 (580)
Q Consensus 164 ~e-~~l~~~d~~~~~~-------------~~~~~~~~-----~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~l~v~~G~ 224 (580)
.. ....+..-..... ........ ...........+.+||+.+. ....+.++.|+
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-------~~~~~~~~~g~ 480 (612)
T 3gyr_A 408 HGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTFN-------DGLGFTIGEGT 480 (612)
T ss_dssp CEEEEEEEECTTCTTTTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECSTT-------SCCCEEEETTC
T ss_pred cccccccccccccccccccccccccccccccccccccccceeeeccCCCccccccccCccCC-------CCcceEeCCCC
Confidence 00 1111110000000 00000000 00001112234667777542 34568899999
Q ss_pred EEEEEEEecCCCCeEEEEEcCceeeEEecCCCcC---------------------------CceEEeEEEeCCCceEEEE
Q 047497 225 TYLLRLINAALNDELFFSIANHTLTVVEADAIYV---------------------------KPFETETLLIAPGQTTNVL 277 (580)
Q Consensus 225 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v---------------------------~P~~~d~l~l~pGeR~dv~ 277 (580)
+++|.|+|.+.. .+.||||||.|+||+.+|... ++...|++.|.+|+.+.|.
T Consensus 481 ~~~w~i~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~ 559 (612)
T 3gyr_A 481 HEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVM 559 (612)
T ss_dssp EEEEEEEECSSS-CEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEE
T ss_pred EEEEEEEcCCCC-CcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEECCCCEEEEE
Confidence 999999999854 567999999999998766321 2335899999999999999
Q ss_pred EEcCCCCCCceEEEEecccc
Q 047497 278 LKTKPHYPSATFFMKARPYV 297 (580)
Q Consensus 278 v~~~~~~~~g~y~i~~~~~~ 297 (580)
+++...+ |.|.++||-..
T Consensus 560 ~rfadnp--G~w~~HCHil~ 577 (612)
T 3gyr_A 560 GKFDGAY--GRFMYHCHLLE 577 (612)
T ss_dssp EECCSCC--EEEEEEESSHH
T ss_pred EEeCCCC--cceEEcCCChH
Confidence 9954433 99999999643
No 79
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.88 E-value=7.4e-09 Score=91.56 Aligned_cols=91 Identities=10% Similarity=0.112 Sum_probs=66.1
Q ss_pred CCCCcEEEEecCCEEEEEEEecCCC-CceEEecCCccC--------------CCCC-CCCCCC--ccccccCCCCeEEEE
Q 047497 59 KFPGPRIVAREGDQLLIKVMNHVQN-NISIHWHGIRQL--------------RSGW-ADGPAY--ITQCPIQTGQSYVYN 120 (580)
Q Consensus 59 ~~pgP~i~v~~Gd~v~v~l~N~l~~-~~~iH~HG~~~~--------------~~~~-~DGv~~--~tq~~i~PG~~~~Y~ 120 (580)
+|--+.|+|++||+|+++|+|.... +++++.|+.... ...+ -++.+. -....|.||+++++.
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEE
Confidence 5555799999999999999999877 888888874310 0000 001000 011337999999999
Q ss_pred EEECCCccceeEeeCcccccccceeeEEEe
Q 047497 121 FTIVGQRGTLWWHAHLSWLRSTLYGPIIIL 150 (580)
Q Consensus 121 f~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~ 150 (580)
|++ +++|+|+||||..+...||.|.|+|+
T Consensus 111 f~~-~~pG~y~f~C~~~~H~~GM~G~i~V~ 139 (139)
T 2aan_A 111 FTA-PAAGTYLYICTVPGHYPLMQGKLVVN 139 (139)
T ss_dssp EEC-CSSEEEEEECCSTTTTTTSEEEEEEC
T ss_pred EEC-CCCeEEEEEcCCCChHHcCEEEEEEC
Confidence 996 78999999999766544999999984
No 80
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.79 E-value=1.1e-08 Score=85.85 Aligned_cols=84 Identities=13% Similarity=0.164 Sum_probs=62.4
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEe-c
Q 047497 457 LVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLA-D 535 (580)
Q Consensus 457 ~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~a-d 535 (580)
.+.++.|++|+|+ |.+ ...|.||+|+..+.. . .|. + .....+|++.+.+|+...+.|.+ +
T Consensus 21 ~i~v~~Gd~V~~~--n~~---~~~H~~~~~~~~~~~-~--~g~-~----------~~~~~~~~~~~~pG~~~~~~f~~~~ 81 (106)
T 2gim_A 21 KLTIKPGDTVEFL--NNK---VPPHNVVFDAALNPA-K--SAD-L----------AKSLSHKQLLMSPGQSTSTTFPADA 81 (106)
T ss_dssp EEEECTTCEEEEE--ECS---SSCCCBEECSSSSTT-C--CHH-H----------HHHHCBCSCCCSTTCEEEEECCTTC
T ss_pred EEEECCCCEEEEE--ECC---CCCceEEEeCCCCcc-c--ccc-c----------chhccccceeeCCCCEEEEEEecCC
Confidence 4688999999986 543 368999999864310 0 000 0 00011467889999999998888 8
Q ss_pred CceeEEEEeechhhhhccceEEEEEe
Q 047497 536 NPGVWFMHCHLEVHTSWGLKMAWIVL 561 (580)
Q Consensus 536 npG~wl~HCHil~H~d~GM~~~~~V~ 561 (580)
.||.|.|||| .|.++||.+.|.|.
T Consensus 82 ~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 82 PAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp CSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCceEEEEeC--ChhhcCcEEEEEEc
Confidence 9999999999 89999999999985
No 81
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.75 E-value=2e-08 Score=83.26 Aligned_cols=80 Identities=10% Similarity=0.071 Sum_probs=64.1
Q ss_pred ECCCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCccccccCCCCeEEEEEEECCCccceeEeeC
Q 047497 56 VNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAH 135 (580)
Q Consensus 56 ~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H 135 (580)
-|..|-...|++++||+|++.++|....++++...+.... ..+.||++.+|.|+. +++|+|.|+|.
T Consensus 21 ~~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~-------------~~~~pg~~~~~~~t~-~~~G~Y~y~C~ 86 (100)
T 4hci_A 21 NDDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGID-------------VVVESGKEKNITVKP-KSAGTYELICR 86 (100)
T ss_dssp ETTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTEE-------------EEECTTCEEEEEECC-CSCEEEEEECT
T ss_pred ECCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCcc-------------eeecCCcceeEEEec-ccCceEEEECc
Confidence 3556655799999999999999999877777766554322 347899999999995 89999999997
Q ss_pred cccccccceeeEEEe
Q 047497 136 LSWLRSTLYGPIIIL 150 (580)
Q Consensus 136 ~~~~~~Gl~G~liV~ 150 (580)
.|. ..||.|.|+|+
T Consensus 87 ~H~-~~gM~G~i~Ve 100 (100)
T 4hci_A 87 YHL-LKGMEGKVIVK 100 (100)
T ss_dssp TTG-GGTCEEEEEEC
T ss_pred ccc-CCCCEEEEEEC
Confidence 532 26999999996
No 82
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.65 E-value=5.2e-08 Score=86.19 Aligned_cols=98 Identities=19% Similarity=0.168 Sum_probs=70.6
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCccccCC--cEEEE-Eec--cC---cCCCCCCCCCCCCCCCCccceEeeCCCcEE
Q 047497 457 LVVLPFNSSVELIMQDTSILGAESHPLHLHGF--NFFVV-GQG--FG---NFDPNKDPTKFNLVDPVERNTVGVPSGGWV 528 (580)
Q Consensus 457 ~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~--~F~Vl-~~g--~g---~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v 528 (580)
.+.++.|++|+|++.|.+. +.+.|.||++.. .+.-+ ..+ .+ .|-+.. -....+++|..|.+|...
T Consensus 34 ~i~v~~G~tV~~~~~N~~~-~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~t~~l~pG~~~ 106 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNN-LGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP------DTPNALAWTAMLNAGESG 106 (140)
T ss_dssp EEEEETTCEEEEEEEECCS-SCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT------TCTTEEEECCCBCTTEEE
T ss_pred eEEECCCCEEEEEEECCCC-CCCceeEEEeccCcchhhhhhhhhhhcccccccCcc------ccccccccceeeCCCcee
Confidence 4788999999999999321 248999999853 12100 000 00 010000 011346889999999999
Q ss_pred EEEEEecCceeEEEEeechhhhhccceEEEEEe
Q 047497 529 AIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVL 561 (580)
Q Consensus 529 ~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~ 561 (580)
.+.|.++.||.|.|||++..|...||.+.+.|.
T Consensus 107 ~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 107 SVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred EEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 999999999999999999999999999999986
No 83
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.65 E-value=5.6e-08 Score=80.23 Aligned_cols=81 Identities=12% Similarity=0.160 Sum_probs=58.7
Q ss_pred CcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCC-CCCccccccCCCCeEEEEEEECCCccceeEeeCccccc
Q 047497 62 GPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADG-PAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLSWLR 140 (580)
Q Consensus 62 gP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG-v~~~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~ 140 (580)
.+.|++++||+|+ ++|....++++|+|+...+.. .|. ....+...+.||+++++.|+ ++|+|+|||+.| ..
T Consensus 17 P~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p~~--~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~~H-~~ 88 (98)
T 2plt_A 17 PKTLTIKSGETVN--FVNNAGFPHNIVFDEDAIPSG--VNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCEPH-QG 88 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEECGGGSCTT--CCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECGGG-GG
T ss_pred CCEEEECCCCEEE--EEECCCCceEEEEeCCCCCCc--cccccccccceecCCCCEEEEEeC---CCeEEEEEcCCc-cc
Confidence 3799999999865 589887899999998644321 110 00011235799999999874 699999999933 34
Q ss_pred ccceeeEEEe
Q 047497 141 STLYGPIIIL 150 (580)
Q Consensus 141 ~Gl~G~liV~ 150 (580)
+||.|.|+|+
T Consensus 89 ~gM~G~i~V~ 98 (98)
T 2plt_A 89 AGMVGKIIVQ 98 (98)
T ss_dssp GTCEEEEEEC
T ss_pred cCCeEEEEEC
Confidence 6999999984
No 84
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.63 E-value=1.4e-07 Score=83.39 Aligned_cols=92 Identities=13% Similarity=0.138 Sum_probs=65.1
Q ss_pred CCCCcEEEEecCCEEEEEEEe--cCCCCceEEecCCc------------c----CCCCCCCCCCCc-cccccCCCCeEEE
Q 047497 59 KFPGPRIVAREGDQLLIKVMN--HVQNNISIHWHGIR------------Q----LRSGWADGPAYI-TQCPIQTGQSYVY 119 (580)
Q Consensus 59 ~~pgP~i~v~~Gd~v~v~l~N--~l~~~~~iH~HG~~------------~----~~~~~~DGv~~~-tq~~i~PG~~~~Y 119 (580)
+|-.+.|+|+.||+|+++++| .....++++.+... . ...+..|....+ .-..|.||++.++
T Consensus 29 ~F~P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~ 108 (140)
T 1qhq_A 29 AFAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSV 108 (140)
T ss_dssp SBSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEE
T ss_pred eEeCCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEE
Confidence 444579999999999999999 66778888877321 0 000000100000 0134799999999
Q ss_pred EEEECCCccceeEeeCccccc-ccceeeEEEeC
Q 047497 120 NFTIVGQRGTLWWHAHLSWLR-STLYGPIIILP 151 (580)
Q Consensus 120 ~f~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~ 151 (580)
.|++ +.+|+|||||+..+.. .||.|.|+|.+
T Consensus 109 ~~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 109 TFRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 9997 7899999999986555 79999999974
No 85
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.62 E-value=1.1e-07 Score=83.11 Aligned_cols=79 Identities=14% Similarity=0.204 Sum_probs=58.0
Q ss_pred CCCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCccccccCCCCeEEEEEEECCCccceeEeeCc
Q 047497 57 NGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAHL 136 (580)
Q Consensus 57 Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~ 136 (580)
+..|-.+.|++++||+|+ +.|....++++++.... +|........+.||++++|.| +++|+|+|||-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~--~~N~d~~~H~v~~~~~~-------~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVY--WVNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEE--EEECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEE--EEECCCCceEEEEeCCC-------CCcccccccccCCCCEEEEEc---CCCEEEEEEeCC
Confidence 445555899999999975 55888777777775422 122122223578999999888 478999999987
Q ss_pred ccccccceeeEEEe
Q 047497 137 SWLRSTLYGPIIIL 150 (580)
Q Consensus 137 ~~~~~Gl~G~liV~ 150 (580)
|. ||.|.|+|+
T Consensus 122 H~---gM~G~I~V~ 132 (132)
T 3c75_A 122 HP---FMRGKVIVE 132 (132)
T ss_dssp CT---TCEEEEEEC
T ss_pred Cc---CCEEEEEEC
Confidence 65 999999985
No 86
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.59 E-value=1.1e-07 Score=78.34 Aligned_cols=81 Identities=12% Similarity=0.177 Sum_probs=57.3
Q ss_pred CcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCccccccCCCCeEEEEEEECCCccceeEeeCcccccc
Q 047497 62 GPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLSWLRS 141 (580)
Q Consensus 62 gP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~ 141 (580)
.+.|++++||+|+ ++|....++++|.++...++.. .++.. .....+.||+++++.| +++|+|+|||+.| ..+
T Consensus 18 P~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~pg~~-~~~~~-~~~~~~~pG~~~~~tf---~~~G~y~~~C~~H-~~~ 89 (98)
T 1pcs_A 18 PSTVTIKAGEEVK--WVNNKLSPHNIVFDADGVPADT-AAKLS-HKGLLFAAGESFTSTF---TEPGTYTYYCEPH-RGA 89 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEECCSSSCHHH-HHHHC-EEEEECSTTCEEEEEC---CSCEEEEEECGGG-TTT
T ss_pred CCEEEECCCCEEE--EEECCCCCcEEEEeCCCCCccc-ccccc-ccccccCCCCEEEEEc---CCCeEEEEEcCCc-ccc
Confidence 3799999999865 5588777899999875432100 00000 1124579999999887 4799999999933 337
Q ss_pred cceeeEEEe
Q 047497 142 TLYGPIIIL 150 (580)
Q Consensus 142 Gl~G~liV~ 150 (580)
||.|.|+|+
T Consensus 90 gM~G~i~V~ 98 (98)
T 1pcs_A 90 GMVGKVVVE 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999985
No 87
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.56 E-value=1.7e-07 Score=76.07 Aligned_cols=76 Identities=16% Similarity=0.267 Sum_probs=56.3
Q ss_pred CCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCccccccCCCCeEEEEEEECCCccceeEeeCcccc
Q 047497 60 FPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLSWL 139 (580)
Q Consensus 60 ~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~ 139 (580)
|-.+.|++++||+|+ +.|....+++++.++... +. .....+.||+++++.| +++|+|||||+.|.
T Consensus 16 f~P~~i~v~~Gd~V~--~~n~~~~~H~v~~~~~~~----~~-----~~~~~~~~g~~~~~~f---~~~G~y~~~C~~H~- 80 (91)
T 1bxv_A 16 FEPSTIEIQAGDTVQ--WVNNKLAPHNVVVEGQPE----LS-----HKDLAFSPGETFEATF---SEPGTYTYYCEPHR- 80 (91)
T ss_dssp EESSEEEECTTCEEE--EEECSSCCEEEEETTCGG----GC-----EEEEECSTTCEEEEEC---CSCEEEEEECTTTG-
T ss_pred EeCCEEEECCCCEEE--EEECCCCCcEEEEeCCCc----cC-----cccceeCCCCEEEEEe---CCCEEEEEEeCCCc-
Confidence 334799999999975 558777889999887210 00 1124589999988877 57999999999432
Q ss_pred cccceeeEEEe
Q 047497 140 RSTLYGPIIIL 150 (580)
Q Consensus 140 ~~Gl~G~liV~ 150 (580)
.+||.|.|+|+
T Consensus 81 ~~gM~g~i~V~ 91 (91)
T 1bxv_A 81 GAGMVGKIVVQ 91 (91)
T ss_dssp GGTCEEEEEEC
T ss_pred cCCCEEEEEEC
Confidence 35999999984
No 88
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.54 E-value=6.8e-08 Score=79.73 Aligned_cols=78 Identities=14% Similarity=0.213 Sum_probs=58.9
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCc-cceEeeCCCcEEEEEEEec
Q 047497 457 LVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVE-RNTVGVPSGGWVAIRFLAD 535 (580)
Q Consensus 457 ~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~-rDTv~vp~g~~v~irf~ad 535 (580)
.+.++.|++|+|+ |.+ ...|.+|+|+..+- +. ..+.+ +|++.+.+|+...+.| +
T Consensus 20 ~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~p--g~----------------~~~~~~~~~~~~~pG~~~~~tf--~ 74 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNK---LSPHNIVFDADGVP--AD----------------TAAKLSHKGLLFAAGESFTSTF--T 74 (98)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEECCSSSC--HH----------------HHHHHCEEEEECSTTCEEEEEC--C
T ss_pred EEEECCCCEEEEE--ECC---CCCcEEEEeCCCCC--cc----------------ccccccccccccCCCCEEEEEc--C
Confidence 4788999999997 432 36899999874321 00 00011 5788999999888766 8
Q ss_pred CceeEEEEeechhhhhccceEEEEEe
Q 047497 536 NPGVWFMHCHLEVHTSWGLKMAWIVL 561 (580)
Q Consensus 536 npG~wl~HCHil~H~d~GM~~~~~V~ 561 (580)
.||.|.|||| .|.++||.+.+.|+
T Consensus 75 ~~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 75 EPGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCeEEEEEcC--CccccCCeEEEEEC
Confidence 9999999999 79999999999883
No 89
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.51 E-value=2.9e-07 Score=75.74 Aligned_cols=77 Identities=14% Similarity=0.210 Sum_probs=55.3
Q ss_pred cEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCC--ccccccCCCCeEEEEEEECCCccceeEeeCccccc
Q 047497 63 PRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAY--ITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLSWLR 140 (580)
Q Consensus 63 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~--~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~ 140 (580)
+.|++++||+| ++.|....+++++.++...+ +|..+ .....+.||+++++.| +.+|+|+|||+.| ..
T Consensus 19 ~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H-~~ 87 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKVGPHNVIFDKVPAG-----ESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCTPH-RG 87 (97)
T ss_dssp SEEEECTTCEE--EEEECSSCCCCBEEEECCTT-----SCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECSST-TT
T ss_pred CEEEECCCCEE--EEEECCCCCeEEEEeCCCCc-----cccccccccceecCCCCEEEEEe---CCCeEEEEEccCh-hh
Confidence 69999999985 56687767788887765431 11100 0113479999999887 5799999999933 33
Q ss_pred ccceeeEEEe
Q 047497 141 STLYGPIIIL 150 (580)
Q Consensus 141 ~Gl~G~liV~ 150 (580)
+||.|.|+|+
T Consensus 88 ~gM~G~i~V~ 97 (97)
T 1b3i_A 88 AGMVGTITVE 97 (97)
T ss_dssp TTCEEEEEEC
T ss_pred cCCEEEEEEC
Confidence 6999999984
No 90
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.50 E-value=2.4e-07 Score=76.31 Aligned_cols=80 Identities=16% Similarity=0.261 Sum_probs=59.2
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEecC
Q 047497 457 LVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLADN 536 (580)
Q Consensus 457 ~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~adn 536 (580)
.+.++.|++|+| .|.+ ...|.+|+|+..+ +...+. ...++|++.+.+|+...++| +.
T Consensus 19 ~i~v~~G~~V~~--~n~~---~~~H~~~~~~~~~---------------p~~~~~-~~~~~~~~~~~pG~~~~~tf--~~ 75 (98)
T 2plt_A 19 TLTIKSGETVNF--VNNA---GFPHNIVFDEDAI---------------PSGVNA-DAISRDDYLNAPGETYSVKL--TA 75 (98)
T ss_dssp EEEECTTCEEEE--EECS---SCCEEEEECGGGS---------------CTTCCH-HHHCEEEEECSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEE--EECC---CCceEEEEeCCCC---------------CCcccc-ccccccceecCCCCEEEEEe--CC
Confidence 478899999998 4543 3689999987422 000000 01246889999999888765 68
Q ss_pred ceeEEEEeechhhhhccceEEEEEe
Q 047497 537 PGVWFMHCHLEVHTSWGLKMAWIVL 561 (580)
Q Consensus 537 pG~wl~HCHil~H~d~GM~~~~~V~ 561 (580)
||.|.|||| .|.++||.+.+.|+
T Consensus 76 ~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 76 AGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp CEEEEEECG--GGGGGTCEEEEEEC
T ss_pred CeEEEEEcC--CccccCCeEEEEEC
Confidence 999999999 79999999999873
No 91
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.46 E-value=3.7e-07 Score=75.84 Aligned_cols=83 Identities=10% Similarity=0.036 Sum_probs=55.0
Q ss_pred CcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCC--CCCCCCCc--cccccCCCCeEEEEEEECCCccceeEeeCcc
Q 047497 62 GPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSG--WADGPAYI--TQCPIQTGQSYVYNFTIVGQRGTLWWHAHLS 137 (580)
Q Consensus 62 gP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~--~~DGv~~~--tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 137 (580)
.+.|++++||+|+ ++|....+++++++.-...... .++..+++ ....+.||+++++.| +++|+|+|||+ .
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~-~ 89 (102)
T 1kdj_A 16 PDSITVSAGEAVE--FTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFYCT-P 89 (102)
T ss_dssp SSEEEECTTCCEE--EEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEECS-T
T ss_pred CCEEEECCCCEEE--EEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEEeC-C
Confidence 3799999999965 5688777888887731100000 00000111 123579999998877 57999999999 2
Q ss_pred cccccceeeEEEe
Q 047497 138 WLRSTLYGPIIIL 150 (580)
Q Consensus 138 ~~~~Gl~G~liV~ 150 (580)
...+||.|.|+|+
T Consensus 90 H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 90 HKSANMKGTLTVK 102 (102)
T ss_dssp TGGGTCEEEEEEC
T ss_pred CcccCCeEEEEEC
Confidence 3347999999985
No 92
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.45 E-value=4.3e-07 Score=73.65 Aligned_cols=72 Identities=15% Similarity=0.332 Sum_probs=56.8
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEecC
Q 047497 457 LVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLADN 536 (580)
Q Consensus 457 ~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~adn 536 (580)
.+.++.|++|+|+ |.+ ...|.+|+|+.. +...++..+.+|+...+.| +.
T Consensus 20 ~i~v~~Gd~V~~~--n~~---~~~H~v~~~~~~------------------------~~~~~~~~~~~g~~~~~~f--~~ 68 (91)
T 1bxv_A 20 TIEIQAGDTVQWV--NNK---LAPHNVVVEGQP------------------------ELSHKDLAFSPGETFEATF--SE 68 (91)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEETTCG------------------------GGCEEEEECSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCcEEEEeCCC------------------------ccCcccceeCCCCEEEEEe--CC
Confidence 4688999999987 432 368999988720 0125678899998877765 89
Q ss_pred ceeEEEEeechhhhhccceEEEEEe
Q 047497 537 PGVWFMHCHLEVHTSWGLKMAWIVL 561 (580)
Q Consensus 537 pG~wl~HCHil~H~d~GM~~~~~V~ 561 (580)
||.|.|||| .|...||.+.+.|+
T Consensus 69 ~G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 69 PGTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CEEEEEEeC--CCccCCCEEEEEEC
Confidence 999999999 89999999999873
No 93
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.44 E-value=3.7e-07 Score=78.67 Aligned_cols=77 Identities=10% Similarity=0.134 Sum_probs=53.1
Q ss_pred CcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCccccccCCCCeEEEEEEECCCccceeEeeCcccccc
Q 047497 62 GPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLSWLRS 141 (580)
Q Consensus 62 gP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~ 141 (580)
.+.|++++||+|++.++|. ++++..+.-.. -||. ....+.||++++|.| +.+|+|||||..| ..+
T Consensus 22 P~~i~V~~GDtVtf~n~~~---~H~v~~~~~~~-----P~g~---~~f~s~pGet~s~TF---~~pG~y~y~C~~H-~~~ 86 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK---GHNSALMKGGA-----PEGA---ETWKGKINEEITVTL---SKPGVYMYQCAPH-VGM 86 (127)
T ss_dssp SSEEEECTTCEEEEECSSS---SCCCEECTTCS-----CTTC---CCCBCCTTCCCEEEC---CSCEEEEEECTTT-GGG
T ss_pred CCEEEECCCCEEEEEECCC---CceEEEccCcC-----CCCc---cceecCCCCEEEEEe---CCCeEEEEEeCCC-CcC
Confidence 3799999999976665553 44444332111 1222 113457999988888 4799999999854 347
Q ss_pred cceeeEEEeCCC
Q 047497 142 TLYGPIIILPKR 153 (580)
Q Consensus 142 Gl~G~liV~~~~ 153 (580)
||.|.|+|.++.
T Consensus 87 GM~G~I~V~~~~ 98 (127)
T 3tu6_A 87 GMIGAIVVGEPA 98 (127)
T ss_dssp TCEEEEEESSCT
T ss_pred CcEEEEEECcCC
Confidence 999999999764
No 94
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.43 E-value=8.6e-07 Score=73.14 Aligned_cols=77 Identities=12% Similarity=0.138 Sum_probs=56.4
Q ss_pred cEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCC------CccccccCCCCeEEEEEEECCCccceeEeeCc
Q 047497 63 PRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPA------YITQCPIQTGQSYVYNFTIVGQRGTLWWHAHL 136 (580)
Q Consensus 63 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~------~~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~ 136 (580)
+.|++++||+| +++|....++++|.++...+ +|.. ......+.||+++++.|+ .+|+|+|||+.
T Consensus 17 ~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~p-----~g~~~~~~~~~~~~~~~~~G~~~~~~f~---~~G~y~~~C~~ 86 (99)
T 1byp_A 17 SDLSIASGEKI--TFKNNAGFPHNDLFDKKEVP-----AGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCAP 86 (99)
T ss_dssp SEEEECTTEEE--EEEECSSCCBCCEECTTSSC-----TTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECGG
T ss_pred CEEEECCCCEE--EEEECCCCcceEEEeCCCCc-----cccccccccccccceeeCCCCEEEEEeC---CCcEEEEEcCC
Confidence 68999999985 56898877888888875432 2211 011135799999988874 79999999993
Q ss_pred ccccccceeeEEEe
Q 047497 137 SWLRSTLYGPIIIL 150 (580)
Q Consensus 137 ~~~~~Gl~G~liV~ 150 (580)
...+||.|.|+|+
T Consensus 87 -H~~~gM~G~i~V~ 99 (99)
T 1byp_A 87 -HAGAGMVGKVTVN 99 (99)
T ss_dssp -GTTTTCEEEEEEC
T ss_pred -ccccCCEEEEEEC
Confidence 2336999999984
No 95
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.43 E-value=6.6e-07 Score=76.68 Aligned_cols=75 Identities=11% Similarity=0.076 Sum_probs=52.3
Q ss_pred cEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCccccccCCCCeEEEEEEECCCccceeEeeCccccccc
Q 047497 63 PRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLSWLRST 142 (580)
Q Consensus 63 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~G 142 (580)
..|++++||+|++.++| .++++..+.- .+-+|. ....+.||++++|.| +.+|+|||+|-.| ..+|
T Consensus 21 ~~i~V~~GdtV~f~~~~---~~H~v~~~~~-----~~P~g~---~~f~~~pg~t~s~TF---~~pG~y~y~C~~H-~~~G 85 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTD---KSHNVEAIKE-----ILPEGV---ESFKSKINESYTLTV---TEPGLYGVKCTPH-FGMG 85 (123)
T ss_dssp SEEEECTTEEEEEEESS---TTCCCEECTT-----SSCTTC---CCCBCCTTCCEEEEE---CSCEEEEEECGGG-TTTT
T ss_pred CEEEECCCCEEEEEECC---CCceEEEcCC-----cCCCCc---cceecCCCCEEEEEe---CCCeEEEEEeCCC-CcCC
Confidence 79999999997777666 2344443321 112332 123467999988888 4799999999843 2379
Q ss_pred ceeeEEEeCC
Q 047497 143 LYGPIIILPK 152 (580)
Q Consensus 143 l~G~liV~~~ 152 (580)
|.|.|+|.+.
T Consensus 86 M~G~I~V~~~ 95 (123)
T 3erx_A 86 MVGLVQVGDA 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred cEEEEEECCC
Confidence 9999999963
No 96
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.41 E-value=1e-06 Score=72.70 Aligned_cols=78 Identities=9% Similarity=0.118 Sum_probs=56.0
Q ss_pred CcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCC----C--ccccccCCCCeEEEEEEECCCccceeEeeC
Q 047497 62 GPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPA----Y--ITQCPIQTGQSYVYNFTIVGQRGTLWWHAH 135 (580)
Q Consensus 62 gP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~----~--~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H 135 (580)
.+.|++++||+| +++|....+++++.++...+ +|.. + -....+.||+++++.|+ ++|+|+|||+
T Consensus 16 P~~i~v~~G~tV--~~~n~~~~~H~v~~~~~~~p-----~~~~~~~~~~~~~~~~~~~G~~~~~tf~---~~G~y~~~C~ 85 (99)
T 1plc_A 16 PSEFSISPGEKI--VFKNNAGFPHNIVFDEDSIP-----SGVDASKISMSEEDLLNAKGETFEVALS---NKGEYSFYCS 85 (99)
T ss_dssp SSEEEECTTCEE--EEEECSSCCBCCEECTTSSC-----TTCCHHHHCCCTTCCBCSTTCEEEEECC---SCEEEEEECG
T ss_pred CCEEEECCCCEE--EEEECCCCceEEEEeCCCCc-----ccccccccccccCccccCCCCEEEEEEC---CCceEEEEcC
Confidence 379999999976 55888777888888764322 1110 0 01134799999988774 7999999999
Q ss_pred cccccccceeeEEEe
Q 047497 136 LSWLRSTLYGPIIIL 150 (580)
Q Consensus 136 ~~~~~~Gl~G~liV~ 150 (580)
.| ..+||.|.|+|+
T Consensus 86 ~H-~~~gM~G~i~V~ 99 (99)
T 1plc_A 86 PH-QGAGMVGKVTVN 99 (99)
T ss_dssp GG-TTTTCEEEEEEC
T ss_pred CC-cccCCEEEEEEC
Confidence 32 337999999984
No 97
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.39 E-value=2e-07 Score=76.70 Aligned_cols=78 Identities=14% Similarity=0.312 Sum_probs=58.0
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEecC
Q 047497 457 LVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLADN 536 (580)
Q Consensus 457 ~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~adn 536 (580)
.+.++.|++|+|+ |.+ ...|.+++++..+ ..+. ....+++..+.+|+...+.| +.
T Consensus 20 ~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~-----~~~~-------------~~~~~~~~~~~~g~~~~~tf--~~ 74 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNK---VGPHNVIFDKVPA-----GESA-------------PALSNTKLAIAPGSFYSVTL--GT 74 (97)
T ss_dssp EEEECTTCEEEEE--ECS---SCCCCBEEEECCT-----TSCH-------------HHHCBCCCCCSCSCCEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCeEEEEeCCCC-----cccc-------------ccccccceecCCCCEEEEEe--CC
Confidence 4688999999887 432 3689999887543 0000 00114677888998877766 89
Q ss_pred ceeEEEEeechhhhhccceEEEEEe
Q 047497 537 PGVWFMHCHLEVHTSWGLKMAWIVL 561 (580)
Q Consensus 537 pG~wl~HCHil~H~d~GM~~~~~V~ 561 (580)
||.|.|||+ .|.++||.+.+.|+
T Consensus 75 ~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 75 PGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp CSEEEEECS--STTTTTCEEEEEEC
T ss_pred CeEEEEEcc--ChhhcCCEEEEEEC
Confidence 999999999 89999999999873
No 98
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.37 E-value=8.1e-07 Score=76.05 Aligned_cols=75 Identities=8% Similarity=-0.019 Sum_probs=52.9
Q ss_pred cEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCccccccCCCCeEEEEEEECCCccceeEeeCccccccc
Q 047497 63 PRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLSWLRST 142 (580)
Q Consensus 63 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~G 142 (580)
..|++++||+|+ +.|.. .++++..+.... -+|. ....+.||++++|.| +.+|+|||||-.| ..+|
T Consensus 22 ~~i~V~~GDTV~--f~n~~-~~Hnv~~~~~~~-----p~g~---~~~~~~pg~t~s~TF---~~~G~y~Y~C~~H-~~~G 86 (124)
T 3ef4_A 22 GFVKVEAGDTVK--FVPTD-KSHNAESVREVW-----PEGV---APVKGGFSKEVVFNA---EKEGLYVLKCAPH-YGMG 86 (124)
T ss_dssp SEEEECTTCEEE--EECSS-SSCCCEECTTTS-----CTTS---CCCBCCTTCCEEEEC---CSSEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEE--EEECC-CCccEEEeCCcC-----CCCc---cccccCCCCEEEEEe---CCCeEEEEEcCCC-CcCC
Confidence 799999999965 55554 566666653211 1222 123467999988888 4689999999633 2369
Q ss_pred ceeeEEEeCC
Q 047497 143 LYGPIIILPK 152 (580)
Q Consensus 143 l~G~liV~~~ 152 (580)
|.|.|+|.++
T Consensus 87 M~G~I~V~~p 96 (124)
T 3ef4_A 87 MVVLVQVGKP 96 (124)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEECCC
Confidence 9999999875
No 99
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.31 E-value=1.9e-06 Score=72.78 Aligned_cols=74 Identities=20% Similarity=0.325 Sum_probs=57.2
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEecC
Q 047497 457 LVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLADN 536 (580)
Q Consensus 457 ~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~adn 536 (580)
.+.++.|+.|+|++.|... ..|-|++... .-+..+.||+...+.|.++.
T Consensus 39 ~i~v~~G~~V~~~~~n~d~---~~H~~~i~~~----------------------------~~~~~i~pG~~~~~~f~~~~ 87 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSP---ISEGFSIDAF----------------------------GVQEVIKAGETKTISFTADK 87 (112)
T ss_dssp EEEEETTCEEEEEEEECSS---SCEEEEEGGG----------------------------TEEEEECTTCEEEEEEECCS
T ss_pred EEEEeCCCEEEEEEEECCC---CeEEEEEcCC----------------------------CceeEeCCCCEEEEEEECCC
Confidence 5788999999999999642 3333332211 12567999999999999999
Q ss_pred ceeEEEEeechhhhhccceEEEEEec
Q 047497 537 PGVWFMHCHLEVHTSWGLKMAWIVLD 562 (580)
Q Consensus 537 pG~wl~HCHil~H~d~GM~~~~~V~~ 562 (580)
||.|.||||+..|... |.+.+.|++
T Consensus 88 ~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 88 AGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp CEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred CEEEEEECCCCCchHH-CEEEEEEeC
Confidence 9999999999887654 999998863
No 100
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.31 E-value=1.5e-06 Score=71.58 Aligned_cols=82 Identities=12% Similarity=0.161 Sum_probs=58.4
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEecC
Q 047497 457 LVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLADN 536 (580)
Q Consensus 457 ~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~adn 536 (580)
.+.++.|++|+| .|.+ ...|.+|+++..|- .+ ++.. .. ...+|++.+.+|+...+.| +.
T Consensus 18 ~i~v~~G~tV~~--~n~~---~~~H~~~~~~~~~p---~g---~~~~----~~----~~~~~~~~~~~G~~~~~~f--~~ 76 (99)
T 1byp_A 18 DLSIASGEKITF--KNNA---GFPHNDLFDKKEVP---AG---VDVT----KI----SMPEEDLLNAPGEEYSVTL--TE 76 (99)
T ss_dssp EEEECTTEEEEE--EECS---SCCBCCEECTTSSC---TT---CCHH----HH----SCCTTCCBCSTTCEEEEEE--CS
T ss_pred EEEECCCCEEEE--EECC---CCcceEEEeCCCCc---cc---cccc----cc----cccccceeeCCCCEEEEEe--CC
Confidence 468899999988 4543 36899999985430 00 0000 00 0125677889999887766 69
Q ss_pred ceeEEEEeechhhhhccceEEEEEe
Q 047497 537 PGVWFMHCHLEVHTSWGLKMAWIVL 561 (580)
Q Consensus 537 pG~wl~HCHil~H~d~GM~~~~~V~ 561 (580)
||.|.|||+ .|.++||.+.+.|+
T Consensus 77 ~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 77 KGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CcEEEEEcC--CccccCCEEEEEEC
Confidence 999999999 79999999999873
No 101
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.30 E-value=3.6e-06 Score=70.31 Aligned_cols=79 Identities=14% Similarity=0.210 Sum_probs=55.4
Q ss_pred CCCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCccccccCCCCeEEEEEEECCCccceeEeeCc
Q 047497 57 NGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAHL 136 (580)
Q Consensus 57 Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~ 136 (580)
+..|-...|++++||+|+ +.|....++++....... |........+.||+++++.| +.+|+|+|+|-.
T Consensus 28 ~~~F~P~~i~V~~G~tV~--~~N~d~~~H~v~~~~~~~-------~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~ 95 (106)
T 1id2_A 28 KMKYLTPEVTIKAGETVY--WVNGEVMPHNVAFKKGIV-------GEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 95 (106)
T ss_dssp TTEESSSEEEECTTCEEE--EEECSSSCBCCEECTTTS-------SSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEeCCEEEECCCCEEE--EEECCCCcEEEEEeCCCC-------CcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 445545799999999975 558876666666554221 11011112478999998888 478999999987
Q ss_pred ccccccceeeEEEe
Q 047497 137 SWLRSTLYGPIIIL 150 (580)
Q Consensus 137 ~~~~~Gl~G~liV~ 150 (580)
|. ||.|.|+|+
T Consensus 96 H~---~M~G~I~V~ 106 (106)
T 1id2_A 96 HP---FMRGKVIVE 106 (106)
T ss_dssp CT---TCEEEEEEC
T ss_pred CC---CCEEEEEEC
Confidence 65 999999984
No 102
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.27 E-value=2.5e-06 Score=70.45 Aligned_cols=72 Identities=22% Similarity=0.394 Sum_probs=57.3
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEecC
Q 047497 457 LVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLADN 536 (580)
Q Consensus 457 ~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~adn 536 (580)
.+.++.|++|+|++.|.+ ...|.|.+.+..+ ...+.+|....+.|.++.
T Consensus 29 ~i~v~~G~tV~~~~~n~d---~~~H~~~~~~~~~----------------------------~~~~~pg~~~~~~~t~~~ 77 (100)
T 4hci_A 29 VITIPINESTTLLLKNKG---KSEHTFTIKKLGI----------------------------DVVVESGKEKNITVKPKS 77 (100)
T ss_dssp EEEECTTSCEEEEEEECS---SSCEEEEEGGGTE----------------------------EEEECTTCEEEEEECCCS
T ss_pred EEEECCCCEEEEEEEcCC---CceEEEEEecCCc----------------------------ceeecCCcceeEEEeccc
Confidence 478899999999999864 2456655443322 235778899999999999
Q ss_pred ceeEEEEeechhhhhccceEEEEEe
Q 047497 537 PGVWFMHCHLEVHTSWGLKMAWIVL 561 (580)
Q Consensus 537 pG~wl~HCHil~H~d~GM~~~~~V~ 561 (580)
||.|.|+|. .|...||.+.+.|+
T Consensus 78 ~G~Y~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 78 AGTYELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CceEEEECc--cccCCCCEEEEEEC
Confidence 999999997 69999999999884
No 103
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.20 E-value=3.1e-06 Score=73.10 Aligned_cols=92 Identities=9% Similarity=0.004 Sum_probs=60.9
Q ss_pred CCCCcEEEEecC-CEEEEEEEecCCCC-----ce--EEecCCcc-------------CCCCCCCC-CCCccccccCCCCe
Q 047497 59 KFPGPRIVAREG-DQLLIKVMNHVQNN-----IS--IHWHGIRQ-------------LRSGWADG-PAYITQCPIQTGQS 116 (580)
Q Consensus 59 ~~pgP~i~v~~G-d~v~v~l~N~l~~~-----~~--iH~HG~~~-------------~~~~~~DG-v~~~tq~~i~PG~~ 116 (580)
+|--..|.|++| |+|+|+|+|....+ ++ |--+|... .-.+..|. +-..+ ..|.||++
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t-~~l~pGet 92 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFT-PIIGGGEK 92 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEEC-CCBCTTCE
T ss_pred eEccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeee-eEECCCCE
Confidence 454469999999 99999999987543 33 32233110 00000111 10011 24799999
Q ss_pred EEEEEEEC--CCccceeEeeCcccccccceeeEEEeC
Q 047497 117 YVYNFTIV--GQRGTLWWHAHLSWLRSTLYGPIIILP 151 (580)
Q Consensus 117 ~~Y~f~~~--~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 151 (580)
.++.|+++ .++|+|||.|-..+.+.||.|.|+|.+
T Consensus 93 ~svtf~~~~~~~~G~Y~f~C~~pgH~~~M~G~i~V~~ 129 (129)
T 1cuo_A 93 TSVKFKVSALSKDEAYTYFCSYPGHFSMMRGTLKLEE 129 (129)
T ss_dssp EEEEEEGGGCCTTSCEEEECCSTTCTTTSEEEEEEEC
T ss_pred EEEEEeccccCCCceEEEEeCCCCchHcCEEEEEEeC
Confidence 99999973 389999999987666669999999963
No 104
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.16 E-value=3e-06 Score=70.27 Aligned_cols=84 Identities=14% Similarity=0.110 Sum_probs=57.1
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCc-cceEeeCCCcEEEEEEEec
Q 047497 457 LVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVE-RNTVGVPSGGWVAIRFLAD 535 (580)
Q Consensus 457 ~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~-rDTv~vp~g~~v~irf~ad 535 (580)
.+.++.|++|+|+ |.+ ...|.++++.-... .+.+... . ..+.+ .+++.+.+|+...+.| +
T Consensus 18 ~i~v~~G~tV~~~--n~~---~~~H~~~~~~~~~~-----~~~~~~~------~-~~~~~~~~~~~~~pG~~~~~tf--~ 78 (102)
T 1kdj_A 18 SITVSAGEAVEFT--LVG---ETGHNIVFDIPAGA-----PGTVASE------L-KAASMDENDLLSEDEPSFKAKV--S 78 (102)
T ss_dssp EEEECTTCCEEEE--ECS---SSCBCCEECCCTTC-----CHHHHHH------H-HHTSCCTTCCBBTTBCEEEECC--C
T ss_pred EEEECCCCEEEEE--ECC---CCCeEEEEeCcccc-----cccccch------h-hcccccccceecCCCCEEEEEe--C
Confidence 5788999999987 533 36899998731000 0000000 0 00112 4677889998877766 8
Q ss_pred CceeEEEEeechhhhhccceEEEEEe
Q 047497 536 NPGVWFMHCHLEVHTSWGLKMAWIVL 561 (580)
Q Consensus 536 npG~wl~HCHil~H~d~GM~~~~~V~ 561 (580)
.||.|.|||+ .|.++||.+.+.|+
T Consensus 79 ~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 79 TPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp SCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred CCeEEEEEeC--CCcccCCeEEEEEC
Confidence 9999999999 99999999999883
No 105
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.15 E-value=6.9e-06 Score=70.43 Aligned_cols=76 Identities=13% Similarity=0.127 Sum_probs=50.1
Q ss_pred CcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCccccccCCCCeEEEEEEECCCccceeEeeCcccccc
Q 047497 62 GPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLSWLRS 141 (580)
Q Consensus 62 gP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~ 141 (580)
.+.|++++||+|+ +.|... ++++..+- ..+-||... ....||++++|.| +.+|+|+|+|..|. .+
T Consensus 20 P~~i~V~~GdtV~--f~~~~~-~H~v~~~~-----~~~p~~~~~---~~~~pG~t~~~tF---~~~G~y~y~C~~H~-~~ 84 (123)
T 1paz_A 20 PAYIKANPGDTVT--FIPVDK-GHNVESIK-----DMIPEGAEK---FKSKINENYVLTV---TQPGAYLVKCTPHY-AM 84 (123)
T ss_dssp SSEEEECTTCEEE--EEESSS-SCCCEECT-----TCSCTTCCC---CBCCTTCCEEEEC---CSCEEEEEECTTTG-GG
T ss_pred CCEEEECCCCEEE--EEECCC-CeEEEEec-----ccCCCCccc---eecCCCCEEEEEe---CCCEEEEEEeCCcc-cC
Confidence 3799999999965 555543 44444331 111122211 2346899888877 46999999997432 36
Q ss_pred cceeeEEEeCC
Q 047497 142 TLYGPIIILPK 152 (580)
Q Consensus 142 Gl~G~liV~~~ 152 (580)
||.|.|+|.++
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1paz_A 85 GMIALIAVGDS 95 (123)
T ss_dssp TCEEEEEESSS
T ss_pred CCEEEEEEcCC
Confidence 99999999874
No 106
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.15 E-value=8.4e-06 Score=67.00 Aligned_cols=80 Identities=13% Similarity=0.082 Sum_probs=55.8
Q ss_pred CCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCC----ccccccCCCCeEEEEEEECCCccceeEeeC
Q 047497 60 FPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAY----ITQCPIQTGQSYVYNFTIVGQRGTLWWHAH 135 (580)
Q Consensus 60 ~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~----~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H 135 (580)
|-.+.|++++||+|+ +.|....++++....-..+ +|.-. .+...+.||+++++.| +++|+|+|+|-
T Consensus 15 F~P~~i~v~~GdtV~--~~n~~~~~H~v~~~~~~~p-----~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~ 84 (98)
T 1iuz_A 15 FVPSKISVAAGEAIE--FVNNAGFPHNIVFDEDAVP-----AGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCE 84 (98)
T ss_dssp EESSEEEECTTCEEE--EEECSSCCEEEEECTTSSC-----TTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECT
T ss_pred EeCCEEEECCCCEEE--EEECCCCCEEEEEeCCCCc-----cccccccccccccccCCCCEEEEEc---CCCEEEEEEch
Confidence 334799999999955 5688777888877652211 22210 0113579999988887 47999999998
Q ss_pred cccccccceeeEEEe
Q 047497 136 LSWLRSTLYGPIIIL 150 (580)
Q Consensus 136 ~~~~~~Gl~G~liV~ 150 (580)
.|. .+||.|.|+|+
T Consensus 85 ~H~-~~gM~G~I~V~ 98 (98)
T 1iuz_A 85 PHA-GAGMKMTITVQ 98 (98)
T ss_dssp TTG-GGTCEEEEEEC
T ss_pred hhc-cCCCEEEEEEC
Confidence 643 36999999985
No 107
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.14 E-value=7.9e-06 Score=73.50 Aligned_cols=92 Identities=9% Similarity=0.101 Sum_probs=60.8
Q ss_pred CCCCcEEEE-ecCCEEEEEEEecCCCC-----ceE--EecCCcc---------CCCCC---CCCCCCc-cccccCCCCeE
Q 047497 59 KFPGPRIVA-REGDQLLIKVMNHVQNN-----ISI--HWHGIRQ---------LRSGW---ADGPAYI-TQCPIQTGQSY 117 (580)
Q Consensus 59 ~~pgP~i~v-~~Gd~v~v~l~N~l~~~-----~~i--H~HG~~~---------~~~~~---~DGv~~~-tq~~i~PG~~~ 117 (580)
+|--..|.| +.||+|+|+|+|....+ +++ --+|... -...+ .|.- .+ ....|.||++.
T Consensus 54 ~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~-vl~~t~~l~pGet~ 132 (167)
T 3ay2_A 54 QFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDAR-VVAHTKLIGGGEES 132 (167)
T ss_dssp CBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTT-EEEECCCBCTTCEE
T ss_pred eEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccc-hhccceeeCCCCEE
Confidence 564469999 99999999999997653 332 2222100 00000 0110 00 01247999999
Q ss_pred EEEEEEC-CCccceeEeeCcccccccceeeEEEeC
Q 047497 118 VYNFTIV-GQRGTLWWHAHLSWLRSTLYGPIIILP 151 (580)
Q Consensus 118 ~Y~f~~~-~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 151 (580)
++.|+++ -++|+|||+|-..+.+.||.|-|+|.+
T Consensus 133 svtf~~~~lkpG~Y~f~Ct~PgH~~gM~G~i~V~~ 167 (167)
T 3ay2_A 133 SLTLDPAKLADGDYKFACTFPGHGALMNGKVTLVD 167 (167)
T ss_dssp EEEECGGGGTTSCEEEECCSTTGGGTSEEEEEEEC
T ss_pred EEEEecCCCCCcEEEEEcCCCCchhcCEEEEEEeC
Confidence 9999863 179999999987666669999999963
No 108
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.10 E-value=7.4e-06 Score=70.22 Aligned_cols=76 Identities=14% Similarity=0.198 Sum_probs=50.7
Q ss_pred CcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCccccccCCCCeEEEEEEECCCccceeEeeCcccccc
Q 047497 62 GPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLSWLRS 141 (580)
Q Consensus 62 gP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~ 141 (580)
.+.|++++||+| ++.|... ++++..+. ..+-||.. ...+.||++++|.| +.+|+|+|+|..|. .+
T Consensus 20 P~~i~V~~GdtV--~f~n~~~-~H~v~~~~-----~~~p~~~~---~~~~~pG~t~~~tF---~~~G~y~y~C~~H~-~~ 84 (123)
T 1pmy_A 20 PALVRLKPGDSI--KFLPTDK-GHNVETIK-----GMAPDGAD---YVKTTVGQEAVVKF---DKEGVYGFKCAPHY-MM 84 (123)
T ss_dssp SSEEEECTTCEE--EEECSSS-SCCCEECT-----TSSCTTCC---CCBCCTTSCEEEEC---CSCEEEEEECSTTT-TT
T ss_pred CCEEEECCCCEE--EEEECCC-CcEEEEec-----ccCCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCcc-cc
Confidence 379999999995 4566543 44444331 11122321 12357999988887 46999999997432 36
Q ss_pred cceeeEEEeCC
Q 047497 142 TLYGPIIILPK 152 (580)
Q Consensus 142 Gl~G~liV~~~ 152 (580)
||.|.|+|.++
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1pmy_A 85 GMVALVVVGDK 95 (123)
T ss_dssp TCEEEEEESSC
T ss_pred CCEEEEEEcCC
Confidence 99999999864
No 109
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=98.03 E-value=2.1e-05 Score=67.24 Aligned_cols=74 Identities=11% Similarity=0.099 Sum_probs=51.1
Q ss_pred CcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCccccccCCCCeEEEEEEECCCccceeEeeCcccccc
Q 047497 62 GPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAHLSWLRS 141 (580)
Q Consensus 62 gP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~ 141 (580)
.+.|++++||+|+ +.|... .++++...-. +-+|.. ...+.||++++|.| +.+|+|||+|-.|..
T Consensus 20 P~~i~V~~GdtV~--f~n~d~-~H~v~~~~~~-----~p~~~~---~~~~~~g~t~~~tF---~~~G~y~y~C~~H~~-- 83 (122)
T 2ux6_A 20 PASLKVAPGDTVT--FIPTDK-GHNVETIKGM-----IPDGAE---AFKSKINENYKVTF---TAPGVYGVKCTPHPF-- 83 (122)
T ss_dssp SSEEEECTTEEEE--EEESSS-SCCCEECTTC-----SCTTCC---CCBCCTTCCEEEEE---CSCEEEEEEETTEEE--
T ss_pred CCEEEECCCCEEE--EEECCC-CcEEEEcccc-----cCCCcc---eeecCCCCEEEEEe---CCCEEEEEEeCCCcc--
Confidence 3799999999855 556644 5555444311 122221 13457999988888 478999999987655
Q ss_pred cceeeEEEeCC
Q 047497 142 TLYGPIIILPK 152 (580)
Q Consensus 142 Gl~G~liV~~~ 152 (580)
|.|.|+|.+.
T Consensus 84 -M~G~I~V~~~ 93 (122)
T 2ux6_A 84 -MVGVVQVGDA 93 (122)
T ss_dssp -EEEEEEESSS
T ss_pred -CEEEEEEeCC
Confidence 9999999874
No 110
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=98.02 E-value=2.6e-05 Score=82.40 Aligned_cols=91 Identities=18% Similarity=0.293 Sum_probs=64.9
Q ss_pred eEEEEECCCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCccccccCCCCeEEEEEEECCCccce
Q 047497 51 KSIISVNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNFTIVGQRGTL 130 (580)
Q Consensus 51 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~f~~~~~~Gt~ 130 (580)
..+...+-.|-.+.|+|++||+|++.|+|.....-.+ ||..++. -|+ ..-+.||++.++.|++ +++|+|
T Consensus 546 V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDVi--HSF~IPs----lGI----K~DaiPGrtnsvtFta-dkPGvY 614 (638)
T 3sbq_A 546 VYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVS--HGFVVVN----HGV----SMEISPQQTSSITFVA-DKPGLH 614 (638)
T ss_dssp EEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCC--EEEEETT----TTE----EEEECTTCEEEEEEEC-CSCEEE
T ss_pred EEEEEEcccccCCEEEEecCceeEEEEecCCcCCCce--eeeEecC----CCc----eeeeCCCCeEEEEEEc-CCCEEE
Confidence 3445566677668999999999999999974211112 3333321 111 1357899999999996 899999
Q ss_pred eEeeCcccc--cccceeeEEEeCC
Q 047497 131 WWHAHLSWL--RSTLYGPIIILPK 152 (580)
Q Consensus 131 wYH~H~~~~--~~Gl~G~liV~~~ 152 (580)
||+|..... -.+|.|.|+|+++
T Consensus 615 ~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 615 WYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp EEECCSCCSTTCTTCEEEEEEECC
T ss_pred EEECCCcCCCCcccceEEEEEecC
Confidence 999996322 2689999999874
No 111
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.02 E-value=7.9e-06 Score=67.26 Aligned_cols=82 Identities=12% Similarity=0.152 Sum_probs=57.1
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEecC
Q 047497 457 LVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLADN 536 (580)
Q Consensus 457 ~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~adn 536 (580)
.+.++.|++|+| .|.+ ...|.++++...+- .+ .+ ... ....++.+.+.+|+...+.| +.
T Consensus 18 ~i~v~~G~tV~~--~n~~---~~~H~v~~~~~~~p---~~---~~------~~~--~~~~~~~~~~~~G~~~~~tf--~~ 76 (99)
T 1plc_A 18 EFSISPGEKIVF--KNNA---GFPHNIVFDEDSIP---SG---VD------ASK--ISMSEEDLLNAKGETFEVAL--SN 76 (99)
T ss_dssp EEEECTTCEEEE--EECS---SCCBCCEECTTSSC---TT---CC------HHH--HCCCTTCCBCSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEE--EECC---CCceEEEEeCCCCc---cc---cc------ccc--cccccCccccCCCCEEEEEE--CC
Confidence 578899999988 4533 36899998874320 00 00 000 00124557788998877755 69
Q ss_pred ceeEEEEeechhhhhccceEEEEEe
Q 047497 537 PGVWFMHCHLEVHTSWGLKMAWIVL 561 (580)
Q Consensus 537 pG~wl~HCHil~H~d~GM~~~~~V~ 561 (580)
||.|.|||+ .|.++||.+.+.|+
T Consensus 77 ~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 77 KGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CceEEEEcC--CCcccCCEEEEEEC
Confidence 999999999 79999999999873
No 112
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=97.98 E-value=3.2e-05 Score=66.69 Aligned_cols=91 Identities=13% Similarity=0.106 Sum_probs=59.6
Q ss_pred CCCCcEEEE-ecCCEEEEEEEecCCCC-----ceEE--ecCCcc-------------CCCCCCCCCCCc-cccccCCCCe
Q 047497 59 KFPGPRIVA-REGDQLLIKVMNHVQNN-----ISIH--WHGIRQ-------------LRSGWADGPAYI-TQCPIQTGQS 116 (580)
Q Consensus 59 ~~pgP~i~v-~~Gd~v~v~l~N~l~~~-----~~iH--~HG~~~-------------~~~~~~DGv~~~-tq~~i~PG~~ 116 (580)
+|--..|.| ++||+|+|+|+|....+ +++- -+|... .-.+..|.- .+ ....|.||++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~t~~l~pGet 92 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTR-VIAHTKVIGGGES 92 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTT-EEEECCCBCTTCE
T ss_pred cEecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhccccccccccccc-ceeeeeEECCCCE
Confidence 454469999 99999999999997653 4432 222100 000001110 01 0124799999
Q ss_pred EEEEEEECC--Cccc-eeEeeCcccccccceeeEEEeC
Q 047497 117 YVYNFTIVG--QRGT-LWWHAHLSWLRSTLYGPIIILP 151 (580)
Q Consensus 117 ~~Y~f~~~~--~~Gt-~wYH~H~~~~~~Gl~G~liV~~ 151 (580)
.+..|++ . .+|+ |||.|-..+.+.||.|.|+|.+
T Consensus 93 ~svtf~~-~~l~~G~~Y~f~C~~pgH~~gM~G~i~V~~ 129 (129)
T 2ccw_A 93 DSVTFDV-SKIAAGENYAYFCSFPGHWAMMKGTLKLGS 129 (129)
T ss_dssp EEEEEEG-GGSCTTCCEEEECCSTTGGGTSEEEEEECC
T ss_pred EEEEEec-cccCCCceEEEEeCCCChhHcCEEEEEEeC
Confidence 9999997 4 5665 9999987777679999999963
No 113
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.97 E-value=3.8e-05 Score=66.13 Aligned_cols=91 Identities=14% Similarity=0.165 Sum_probs=60.6
Q ss_pred CCCCcEEEE-ecCCEEEEEEEecCCCC-----ceEEec--C---------Cc----cCCCCCCCCCCCcc-ccccCCCCe
Q 047497 59 KFPGPRIVA-REGDQLLIKVMNHVQNN-----ISIHWH--G---------IR----QLRSGWADGPAYIT-QCPIQTGQS 116 (580)
Q Consensus 59 ~~pgP~i~v-~~Gd~v~v~l~N~l~~~-----~~iH~H--G---------~~----~~~~~~~DGv~~~t-q~~i~PG~~ 116 (580)
+|--..|.| +.|++|+|+|+|....+ +++-+- + +. ..-.+..|.- .+. ...|.||++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~-~~~~t~~l~pGes 91 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDER-VIAHTSVIGGGET 91 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTT-EEEECCCBCTTCE
T ss_pred eEecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccch-hhccceeeCCCCE
Confidence 454468999 99999999999997654 443321 1 00 0000001110 010 124799999
Q ss_pred EEEEEEECC--Cccc-eeEeeCcccccccceeeEEEeC
Q 047497 117 YVYNFTIVG--QRGT-LWWHAHLSWLRSTLYGPIIILP 151 (580)
Q Consensus 117 ~~Y~f~~~~--~~Gt-~wYH~H~~~~~~Gl~G~liV~~ 151 (580)
+++.|++ . ++|+ |+|.|-..+.++||.|.|+|.+
T Consensus 92 ~~vtf~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~~ 128 (128)
T 2iaa_C 92 DSVTFDV-SKLKEGEDYAFFCSFPGHWSIMKGTIELGS 128 (128)
T ss_dssp EEEEEES-SCCCTTCCEEEECCSTTCTTTSEEEEEECC
T ss_pred EEEEEec-cccCCCceEEEEECCCChhHCCEEEEEEeC
Confidence 9999996 4 6885 9999988777779999999963
No 114
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.92 E-value=4.8e-05 Score=65.49 Aligned_cols=91 Identities=11% Similarity=0.059 Sum_probs=59.6
Q ss_pred CCCCcEEEE-ecCCEEEEEEEecCCCC-----ceEEe--cCCcc-------CCCCCCCCCC-----Ccc-ccccCCCCeE
Q 047497 59 KFPGPRIVA-REGDQLLIKVMNHVQNN-----ISIHW--HGIRQ-------LRSGWADGPA-----YIT-QCPIQTGQSY 117 (580)
Q Consensus 59 ~~pgP~i~v-~~Gd~v~v~l~N~l~~~-----~~iH~--HG~~~-------~~~~~~DGv~-----~~t-q~~i~PG~~~ 117 (580)
+|--..|.| ++||+|+|+|+|....+ +++-+ .|... .....+|=++ .+. -..|.||++.
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEE
Confidence 454468999 99999999999997553 44332 22110 0000011001 010 1147999999
Q ss_pred EEEEEECC--Cccc-eeEeeCcccccccceeeEEEe
Q 047497 118 VYNFTIVG--QRGT-LWWHAHLSWLRSTLYGPIIIL 150 (580)
Q Consensus 118 ~Y~f~~~~--~~Gt-~wYH~H~~~~~~Gl~G~liV~ 150 (580)
++.|++ . .+|+ |||.|-..+.+.||.|-|+|.
T Consensus 94 svtf~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~ 128 (128)
T 1nwp_A 94 SVTFDV-SKLAAGEKYGFFCSFPGHISMMKGTVTLK 128 (128)
T ss_dssp EEEEEG-GGSCTTSCEEEECCSTTCGGGSEEEEEEC
T ss_pred EEEEec-cccCCCceEEEEECCCChhHCCEEEEEEC
Confidence 999996 4 5776 999998777666999999984
No 115
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.89 E-value=2.5e-05 Score=69.73 Aligned_cols=89 Identities=15% Similarity=0.316 Sum_probs=60.4
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCc---cceEeeCCCc--EEEE
Q 047497 456 KLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVE---RNTVGVPSGG--WVAI 530 (580)
Q Consensus 456 ~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~---rDTv~vp~g~--~v~i 530 (580)
+.+.++.|++|.+++.|.+ ....|-|-++.. + ..+... +. ..+.. .-+..|.||+ ...+
T Consensus 61 p~i~V~~GD~V~~~~tN~~--~~~~H~~~i~~~-------~-~~~~~~--~~----~~~~~~~~~~~~~i~PG~sgt~t~ 124 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTN--KGFGHSFDITKK-------G-PPYAVM--PV----IDPIVAGTGFSPVPKDGKFGYTDF 124 (154)
T ss_dssp CEEEECTTCEEEEEEEECC--TTCCCCCEEESC-------C-SCCCSS--CC----CCSEEEEBCCCCCCBTTBEEEEEE
T ss_pred CEEEEeCCCEEEEEEEcCC--CCeeeEEEEeec-------C-cchhcc--cc----ccccccccccccccCCCCceEEEE
Confidence 4689999999999999953 134565555421 1 011000 00 00000 0112678999 9999
Q ss_pred EEEecCceeEEEEeechhhhhccceEEEEEe
Q 047497 531 RFLADNPGVWFMHCHLEVHTSWGLKMAWIVL 561 (580)
Q Consensus 531 rf~adnpG~wl~HCHil~H~d~GM~~~~~V~ 561 (580)
.|.+ .||.+.||||+--|...||-+.+.|+
T Consensus 125 tft~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 125 TWHP-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EECC-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEE-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 9999 99999999999999999999999873
No 116
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.88 E-value=3.9e-05 Score=82.73 Aligned_cols=79 Identities=15% Similarity=0.311 Sum_probs=63.0
Q ss_pred ceEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEe
Q 047497 455 TKLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLA 534 (580)
Q Consensus 455 ~~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~a 534 (580)
.+.+.++.|+.|+|++.|.....+..|.|+++++.+. ..+.||....+.|++
T Consensus 512 pp~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~----------------------------~~i~PG~t~t~~Fta 563 (595)
T 1fwx_A 512 IESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------------------MEIGPQMTSSVTFVA 563 (595)
T ss_dssp CSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------------------EEECTTCEEEEEEEC
T ss_pred CCEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc----------------------------eeeCCCCeEEEEEEC
Confidence 3467899999999999995422235788888775421 368889999999999
Q ss_pred cCceeEEEEee---chhhhhccceEEEEEecC
Q 047497 535 DNPGVWFMHCH---LEVHTSWGLKMAWIVLDG 563 (580)
Q Consensus 535 dnpG~wl~HCH---il~H~d~GM~~~~~V~~~ 563 (580)
+.||.|.|||| ...|. ||.+.+.|++.
T Consensus 564 ~~pGtY~yhC~e~Cg~~H~--gM~G~IiV~p~ 593 (595)
T 1fwx_A 564 ANPGVYWYYCQWFCHALHM--EMRGRMLVEPK 593 (595)
T ss_dssp CSCEEEEEECCSCCSTTCT--TCEEEEEEECC
T ss_pred CCCEEEEEECCCCCCCCcc--CCEEEEEEEcC
Confidence 99999999999 45675 99999999753
No 117
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.77 E-value=7.5e-05 Score=62.07 Aligned_cols=72 Identities=17% Similarity=0.230 Sum_probs=50.2
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEecC
Q 047497 457 LVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLADN 536 (580)
Q Consensus 457 ~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~adn 536 (580)
.+.++.|++|+|+ |.. ...|.+|+|... .|. .. -++-.+.+|+...+.| +.
T Consensus 34 ~i~v~~Gd~V~~~--N~d---~~~H~v~~~~~~-------~g~--------------~~-~~~~~~~pG~~~~~tf--~~ 84 (105)
T 2ov0_A 34 ELHVKVGDTVTWI--NRE---AMPHNVHFVAGV-------LGE--------------AA-LKGPMMKKEQAYSLTF--TE 84 (105)
T ss_dssp EEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS--------------SC-EECCCBCTTEEEEEEE--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCEEEEEcCCC-------CCc--------------cc-ccccccCCCCEEEEEe--CC
Confidence 5788999999986 543 368999887521 010 00 1122467888766555 89
Q ss_pred ceeEEEEeechhhhhccceEEEEEe
Q 047497 537 PGVWFMHCHLEVHTSWGLKMAWIVL 561 (580)
Q Consensus 537 pG~wl~HCHil~H~d~GM~~~~~V~ 561 (580)
||.+.|||++ |. ||.+.+.|+
T Consensus 85 ~G~y~y~C~~--H~--gM~G~i~V~ 105 (105)
T 2ov0_A 85 AGTYDYHCTP--HP--FMRGKVVVE 105 (105)
T ss_dssp CEEEEEECSS--CT--TCEEEEEEC
T ss_pred CEEEEEEeCC--CC--CCEEEEEEC
Confidence 9999999998 65 999999873
No 118
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.33 E-value=0.00049 Score=58.65 Aligned_cols=74 Identities=16% Similarity=0.179 Sum_probs=50.9
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEecC
Q 047497 457 LVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLADN 536 (580)
Q Consensus 457 ~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~adn 536 (580)
.+.++.|++|+|+..+ ..|-+..+.. .+... .+.+.+.+|....+.| +.
T Consensus 23 ~i~V~~GDTV~f~n~~------~~Hnv~~~~~----------~~p~g-------------~~~~~~~pg~t~s~TF--~~ 71 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPTD------KSHNAESVRE----------VWPEG-------------VAPVKGGFSKEVVFNA--EK 71 (124)
T ss_dssp EEEECTTCEEEEECSS------SSCCCEECTT----------TSCTT-------------SCCCBCCTTCCEEEEC--CS
T ss_pred EEEECCCCEEEEEECC------CCccEEEeCC----------cCCCC-------------ccccccCCCCEEEEEe--CC
Confidence 5789999999998543 4666655421 11100 1122345777655554 89
Q ss_pred ceeEEEEeechhhhhccceEEEEEecC
Q 047497 537 PGVWFMHCHLEVHTSWGLKMAWIVLDG 563 (580)
Q Consensus 537 pG~wl~HCHil~H~d~GM~~~~~V~~~ 563 (580)
||.|.|||- .|..+||.+.+.|.++
T Consensus 72 ~G~y~Y~C~--~H~~~GM~G~I~V~~p 96 (124)
T 3ef4_A 72 EGLYVLKCA--PHYGMGMVVLVQVGKP 96 (124)
T ss_dssp SEEEEEECT--TTGGGTCEEEEEESSC
T ss_pred CeEEEEEcC--CCCcCCCEEEEEECCC
Confidence 999999995 8999999999999864
No 119
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.29 E-value=0.00044 Score=59.31 Aligned_cols=75 Identities=19% Similarity=0.267 Sum_probs=49.7
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEecC
Q 047497 457 LVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLADN 536 (580)
Q Consensus 457 ~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~adn 536 (580)
.+.++.|++|+|++.| ..|-+..+.. .+ |.. ...+.+.+|+...+ +++.
T Consensus 24 ~i~V~~GDtVtf~n~~------~~H~v~~~~~----------~~-P~g------------~~~f~s~pGet~s~--TF~~ 72 (127)
T 3tu6_A 24 VIRAQPGDTVTFVAKD------KGHNSALMKG----------GA-PEG------------AETWKGKINEEITV--TLSK 72 (127)
T ss_dssp EEEECTTCEEEEECSS------SSCCCEECTT----------CS-CTT------------CCCCBCCTTCCCEE--ECCS
T ss_pred EEEECCCCEEEEEECC------CCceEEEccC----------cC-CCC------------ccceecCCCCEEEE--EeCC
Confidence 5789999999998765 2354443321 00 100 01122346665444 4589
Q ss_pred ceeEEEEeechhhhhccceEEEEEecCC
Q 047497 537 PGVWFMHCHLEVHTSWGLKMAWIVLDGK 564 (580)
Q Consensus 537 pG~wl~HCHil~H~d~GM~~~~~V~~~~ 564 (580)
||.|.|||- .|...||.+.+.|.++.
T Consensus 73 pG~y~y~C~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 73 PGVYMYQCA--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred CeEEEEEeC--CCCcCCcEEEEEECcCC
Confidence 999999999 69999999999998654
No 120
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.25 E-value=0.00076 Score=57.52 Aligned_cols=74 Identities=16% Similarity=0.209 Sum_probs=50.6
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEecC
Q 047497 457 LVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLADN 536 (580)
Q Consensus 457 ~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~adn 536 (580)
.+.++.|++|+|++.| ..|-+..+.. .+ |.. .+.+.+.+|+...+.| +.
T Consensus 22 ~i~V~~GdtV~f~~~~------~~H~v~~~~~----------~~-P~g------------~~~f~~~pg~t~s~TF--~~ 70 (123)
T 3erx_A 22 FVRAEPGDVINFVPTD------KSHNVEAIKE----------IL-PEG------------VESFKSKINESYTLTV--TE 70 (123)
T ss_dssp EEEECTTEEEEEEESS------TTCCCEECTT----------SS-CTT------------CCCCBCCTTCCEEEEE--CS
T ss_pred EEEECCCCEEEEEECC------CCceEEEcCC----------cC-CCC------------ccceecCCCCEEEEEe--CC
Confidence 4789999999999876 2355544321 00 000 0112245677655555 89
Q ss_pred ceeEEEEeechhhhhccceEEEEEecC
Q 047497 537 PGVWFMHCHLEVHTSWGLKMAWIVLDG 563 (580)
Q Consensus 537 pG~wl~HCHil~H~d~GM~~~~~V~~~ 563 (580)
||.|.|+|- .|..+||.+.+.|.++
T Consensus 71 pG~y~y~C~--~H~~~GM~G~I~V~~~ 95 (123)
T 3erx_A 71 PGLYGVKCT--PHFGMGMVGLVQVGDA 95 (123)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEESSS
T ss_pred CeEEEEEeC--CCCcCCcEEEEEECCC
Confidence 999999999 8999999999999863
No 121
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.14 E-value=0.0026 Score=53.83 Aligned_cols=88 Identities=11% Similarity=0.114 Sum_probs=54.8
Q ss_pred CCCCcEEEEec-CCEEEEEEEecCCCC-----ceEEe-----------cCCccCC-CCC---CCC-CCCccccccCCCCe
Q 047497 59 KFPGPRIVARE-GDQLLIKVMNHVQNN-----ISIHW-----------HGIRQLR-SGW---ADG-PAYITQCPIQTGQS 116 (580)
Q Consensus 59 ~~pgP~i~v~~-Gd~v~v~l~N~l~~~-----~~iH~-----------HG~~~~~-~~~---~DG-v~~~tq~~i~PG~~ 116 (580)
+|--..|.|+. |++|+|+|+|....+ +++=+ -|+..-+ ..+ .|. +-.-| ..|.||++
T Consensus 14 ~F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t-~~l~pGes 92 (125)
T 3fsa_A 14 QFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHT-KLIGSGEK 92 (125)
T ss_dssp CBSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEEC-CCBCTTCE
T ss_pred EEecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceecc-ceeCCCcE
Confidence 45457999976 999999999998543 33211 1111100 011 111 10001 23799999
Q ss_pred EEEEEEEC--CCccceeEeeCcccccccceeeEEEe
Q 047497 117 YVYNFTIV--GQRGTLWWHAHLSWLRSTLYGPIIIL 150 (580)
Q Consensus 117 ~~Y~f~~~--~~~Gt~wYH~H~~~~~~Gl~G~liV~ 150 (580)
.+..|+.+ ..+|+|.|.|. +.+ ||.|.++|.
T Consensus 93 ~~vtf~~~~l~~~G~y~f~C~--gH~-~M~G~v~V~ 125 (125)
T 3fsa_A 93 DSVTFDVSKLKEGEQYMFFCA--AHA-AMKGTLTLK 125 (125)
T ss_dssp EEEEEEGGGC---CCEEEECS--SST-TCEEEEEEC
T ss_pred EEEEEeCcCcCCCccEEEEcC--CCC-CcEEEEEEC
Confidence 99999974 27999999999 334 999999984
No 122
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.00 E-value=0.0021 Score=52.42 Aligned_cols=80 Identities=19% Similarity=0.341 Sum_probs=53.1
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEecC
Q 047497 457 LVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLADN 536 (580)
Q Consensus 457 ~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~adn 536 (580)
.+.++.|++|+|+ |.+ ...|-+.+... .+ +...+. .....+...+.+|....+.| +.
T Consensus 19 ~i~v~~GdtV~~~--n~~---~~~H~v~~~~~----------~~-----p~g~~~-~~~~~~~~~~~~g~~~~~tf--~~ 75 (98)
T 1iuz_A 19 KISVAAGEAIEFV--NNA---GFPHNIVFDED----------AV-----PAGVDA-DAISYDDYLNSKGETVVRKL--ST 75 (98)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEECTT----------SS-----CTTCCH-HHHCEEEEECSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCEEEEEeCC----------CC-----cccccc-ccccccccccCCCCEEEEEc--CC
Confidence 5788999999996 432 25676554431 00 000000 00113456788998877765 89
Q ss_pred ceeEEEEeechhhhhccceEEEEEe
Q 047497 537 PGVWFMHCHLEVHTSWGLKMAWIVL 561 (580)
Q Consensus 537 pG~wl~HCHil~H~d~GM~~~~~V~ 561 (580)
||.|.|+|-+ |..+||.+.+.|+
T Consensus 76 ~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 76 PGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp CEEEEEECTT--TGGGTCEEEEEEC
T ss_pred CEEEEEEchh--hccCCCEEEEEEC
Confidence 9999999986 9999999999873
No 123
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=96.92 E-value=0.003 Score=52.33 Aligned_cols=72 Identities=17% Similarity=0.148 Sum_probs=48.8
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEecC
Q 047497 457 LVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLADN 536 (580)
Q Consensus 457 ~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~adn 536 (580)
.+.++.|++|+|+ |.+ ...|-+++....- |. ..-++-.+.+|....+.| +.
T Consensus 35 ~i~V~~G~tV~~~--N~d---~~~H~v~~~~~~~-------~~---------------~~~~s~~l~~g~~~~~tf--~~ 85 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGE---VMPHNVAFKKGIV-------GE---------------DAFRGEMMTKDQAYAITF--NE 85 (106)
T ss_dssp EEEECTTCEEEEE--ECS---SSCBCCEECTTTS-------SS---------------SCEECCCBCTTEEEEEEE--CS
T ss_pred EEEECCCCEEEEE--ECC---CCcEEEEEeCCCC-------Cc---------------ccccccccCCCCEEEEEe--CC
Confidence 5788999999997 532 2567665543210 00 001233567888777665 89
Q ss_pred ceeEEEEeechhhhhccceEEEEEe
Q 047497 537 PGVWFMHCHLEVHTSWGLKMAWIVL 561 (580)
Q Consensus 537 pG~wl~HCHil~H~d~GM~~~~~V~ 561 (580)
||.|.|+|-+ |. ||.+.+.|+
T Consensus 86 ~G~y~~~C~~--H~--~M~G~I~V~ 106 (106)
T 1id2_A 86 AGSYDYFCTP--HP--FMRGKVIVE 106 (106)
T ss_dssp CEEEEEECSS--CT--TCEEEEEEC
T ss_pred CEEEEEEeCC--CC--CCEEEEEEC
Confidence 9999999987 76 999999873
No 124
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.74 E-value=0.0048 Score=53.31 Aligned_cols=72 Identities=17% Similarity=0.148 Sum_probs=49.5
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEecC
Q 047497 457 LVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLADN 536 (580)
Q Consensus 457 ~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~adn 536 (580)
.+.++.|++|+|+ |.+ ...|-+++.... .|. ..-++-.+.+|+...+.| +.
T Consensus 61 ~i~V~~GdtV~~~--N~d---~~~H~v~~~~~~-------~g~---------------~~~~s~~l~pG~t~~~tF--~~ 111 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGE---VMPHNVAFKKGI-------VGE---------------DAFRGEMMTKDQAYAITF--NE 111 (132)
T ss_dssp EEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS---------------SCEECCCBCTTEEEEEEE--CS
T ss_pred EEEECCCCEEEEE--ECC---CCceEEEEeCCC-------CCc---------------ccccccccCCCCEEEEEc--CC
Confidence 5788999999997 532 356777654311 000 011233567888777666 89
Q ss_pred ceeEEEEeechhhhhccceEEEEEe
Q 047497 537 PGVWFMHCHLEVHTSWGLKMAWIVL 561 (580)
Q Consensus 537 pG~wl~HCHil~H~d~GM~~~~~V~ 561 (580)
||.|.|||-+ |. ||.+.+.|+
T Consensus 112 ~G~y~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 112 AGSYDYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp CEEEEEECSS--CT--TCEEEEEEC
T ss_pred CEEEEEEeCC--Cc--CCEEEEEEC
Confidence 9999999987 76 999999873
No 125
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.66 E-value=0.0072 Score=52.32 Aligned_cols=74 Identities=14% Similarity=0.237 Sum_probs=53.9
Q ss_pred cEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCccccccCCCCeEEEEEEECCCccceeEeeCc-cc-cc
Q 047497 63 PRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAHL-SW-LR 140 (580)
Q Consensus 63 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~-~~-~~ 140 (580)
..|++..|++|++.++|.. . .|+...+.. |. ..-+.||+.-++.|+. +++|+|+|+|.. -+ .-
T Consensus 60 ~~l~Vp~G~~V~~~vts~D-V-----~Hsf~ip~~----~~----k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD-V-----IHGFHVEGT----NI----NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS-S-----CEEEEETTS----SC----EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTS
T ss_pred CEEEEcCCCEEEEEEEeCC-c-----cceEEecCC----Cc----eeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCc
Confidence 5899999999999999973 3 344444321 11 1346899999999996 899999999954 12 22
Q ss_pred ccceeeEEEeC
Q 047497 141 STLYGPIIILP 151 (580)
Q Consensus 141 ~Gl~G~liV~~ 151 (580)
.+|.|.++|.+
T Consensus 125 ~~M~g~v~V~~ 135 (135)
T 2cua_A 125 QNMFGTIVVKE 135 (135)
T ss_dssp TTCEEEEEEEC
T ss_pred CCCEEEEEEEC
Confidence 68999998863
No 126
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.59 E-value=0.0072 Score=51.44 Aligned_cols=37 Identities=19% Similarity=0.337 Sum_probs=30.0
Q ss_pred CCCcEEEEEEEecCceeEEEEeechhhhhccceEEEEEecC
Q 047497 523 PSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVLDG 563 (580)
Q Consensus 523 p~g~~v~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~~~ 563 (580)
.+|.... ++++.||.|.|+|- .|..+||.+.+.|.++
T Consensus 59 ~pG~t~~--~tF~~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 59 KINENYV--LTVTQPGAYLVKCT--PHYAMGMIALIAVGDS 95 (123)
T ss_dssp CTTCCEE--EECCSCEEEEEECT--TTGGGTCEEEEEESSS
T ss_pred CCCCEEE--EEeCCCEEEEEEeC--CcccCCCEEEEEEcCC
Confidence 4666544 45589999999997 5999999999999763
No 127
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.40 E-value=0.013 Score=52.49 Aligned_cols=79 Identities=15% Similarity=0.278 Sum_probs=57.1
Q ss_pred CCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCCccccccCCCCeEEEEEEECCCccceeEeeCc-
Q 047497 58 GKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNFTIVGQRGTLWWHAHL- 136 (580)
Q Consensus 58 g~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~- 136 (580)
-++-...|++..|++|++.++|. +.. |+..++.. | + +.-+.||+..++.|+. +++|+|++.|..
T Consensus 88 ~~f~Pn~l~VP~G~~Vr~~vTS~-DVi-----Hsf~IP~l----g---i-k~da~PG~~n~~~~~~-~kpG~y~g~Cse~ 152 (168)
T 3s8f_B 88 FGYQPNPIEVPQGAEIVFKITSP-DVI-----HGFHVEGT----N---I-NVEVLPGEVSTVRYTF-KRPGEYRIICNQY 152 (168)
T ss_dssp TEEESSSEEEETTSEEEEEEECS-SSC-----EEEEETTS----S---C-EEEECTTBCEEEEEEC-CSCEEEEEECCSC
T ss_pred ceEecCEEEEeCCCeEEEEEecC-Cce-----EEEEECCC----C---e-EEEecCCceeEEEEEe-CCCEEEEEECCcC
Confidence 33333689999999999999997 333 44443321 1 1 1335799999999996 899999999984
Q ss_pred cccc-ccceeeEEEeC
Q 047497 137 SWLR-STLYGPIIILP 151 (580)
Q Consensus 137 ~~~~-~Gl~G~liV~~ 151 (580)
-+.. ++|.|-++|++
T Consensus 153 CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 153 CGLGHQNMFGTIVVKE 168 (168)
T ss_dssp CSTTGGGCEEEEEEEC
T ss_pred CCCCcCCCEEEEEEeC
Confidence 4443 78999999973
No 128
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=96.37 E-value=0.008 Score=51.15 Aligned_cols=38 Identities=24% Similarity=0.308 Sum_probs=30.6
Q ss_pred eCCCcEEEEEEEecCceeEEEEeechhhhhccceEEEEEecC
Q 047497 522 VPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVLDG 563 (580)
Q Consensus 522 vp~g~~v~irf~adnpG~wl~HCHil~H~d~GM~~~~~V~~~ 563 (580)
+.+|....+ +++.||.|.|+|- .|..+||.+.+.|.++
T Consensus 58 ~~pG~t~~~--tF~~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 58 TTVGQEAVV--KFDKEGVYGFKCA--PHYMMGMVALVVVGDK 95 (123)
T ss_dssp CCTTSCEEE--ECCSCEEEEEECS--TTTTTTCEEEEEESSC
T ss_pred cCCCCEEEE--EeCCCeEEEEEeC--CccccCCEEEEEEcCC
Confidence 456775444 5589999999998 5999999999999764
No 129
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.21 E-value=0.016 Score=61.45 Aligned_cols=79 Identities=15% Similarity=0.255 Sum_probs=60.6
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEec
Q 047497 456 KLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLAD 535 (580)
Q Consensus 456 ~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~ad 535 (580)
..+.++.|+.|+|++.|.....+..|.|-+.+... -+.+.||....+.|.++
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI----------------------------K~DaiPGrtnsvtFtad 609 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV----------------------------SMEISPQQTSSITFVAD 609 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE----------------------------EEEECTTCEEEEEEECC
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCc----------------------------eeeeCCCCeEEEEEEcC
Confidence 35789999999999999532224667776655432 12577899999999999
Q ss_pred CceeEEEEeechhhh-hccceEEEEEec
Q 047497 536 NPGVWFMHCHLEVHT-SWGLKMAWIVLD 562 (580)
Q Consensus 536 npG~wl~HCHil~H~-d~GM~~~~~V~~ 562 (580)
.||.|.+||...-|. +.+|.+.+.|++
T Consensus 610 kPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 610 KPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp SCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CCEEEEEECCCcCCCCcccceEEEEEec
Confidence 999999999986664 468999999864
No 130
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=95.53 E-value=0.031 Score=47.37 Aligned_cols=72 Identities=18% Similarity=0.228 Sum_probs=46.4
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEecC
Q 047497 457 LVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLADN 536 (580)
Q Consensus 457 ~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~adn 536 (580)
.+.++.|++|+|+..+ ..|-+++.. +.+... . ..+.+.+|....+.| +.
T Consensus 22 ~i~V~~GdtV~f~n~d------~~H~v~~~~----------~~~p~~--~-----------~~~~~~~g~t~~~tF--~~ 70 (122)
T 2ux6_A 22 SLKVAPGDTVTFIPTD------KGHNVETIK----------GMIPDG--A-----------EAFKSKINENYKVTF--TA 70 (122)
T ss_dssp EEEECTTEEEEEEESS------SSCCCEECT----------TCSCTT--C-----------CCCBCCTTCCEEEEE--CS
T ss_pred EEEECCCCEEEEEECC------CCcEEEEcc----------cccCCC--c-----------ceeecCCCCEEEEEe--CC
Confidence 5788999999997542 246555543 111100 0 011234676655554 89
Q ss_pred ceeEEEEeechhhhhccceEEEEEecC
Q 047497 537 PGVWFMHCHLEVHTSWGLKMAWIVLDG 563 (580)
Q Consensus 537 pG~wl~HCHil~H~d~GM~~~~~V~~~ 563 (580)
||.|.|+|-+ |.. |.+.+.|.+.
T Consensus 71 ~G~y~y~C~~--H~~--M~G~I~V~~~ 93 (122)
T 2ux6_A 71 PGVYGVKCTP--HPF--MVGVVQVGDA 93 (122)
T ss_dssp CEEEEEEETT--EEE--EEEEEEESSS
T ss_pred CEEEEEEeCC--Ccc--CEEEEEEeCC
Confidence 9999999987 766 9999999763
No 131
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.49 E-value=0.051 Score=46.88 Aligned_cols=70 Identities=20% Similarity=0.328 Sum_probs=51.8
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEecCc
Q 047497 458 VVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLADNP 537 (580)
Q Consensus 458 ~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~adnp 537 (580)
+.++.|+.|+|++.|.+ ..| .|++-+.+ --+.+.||....+.|.++.|
T Consensus 62 l~Vp~G~~V~~~vts~D----V~H-------sf~ip~~~---------------------~k~d~~PG~~~~~~~~~~~~ 109 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPD----VIH-------GFHVEGTN---------------------INVEVLPGEVSTVRYTFKRP 109 (135)
T ss_dssp EEEETTSEEEEEEEBSS----SCE-------EEEETTSS---------------------CEEEECBTBCEEEEEECCSC
T ss_pred EEEcCCCEEEEEEEeCC----ccc-------eEEecCCC---------------------ceeEeCCCCcEEEEEEcCCC
Confidence 67889999999998742 333 35441110 11346778888899999999
Q ss_pred eeEEEEeec---hhhhhccceEEEEEe
Q 047497 538 GVWFMHCHL---EVHTSWGLKMAWIVL 561 (580)
Q Consensus 538 G~wl~HCHi---l~H~d~GM~~~~~V~ 561 (580)
|.|.++|.. ..| .+|-..++|.
T Consensus 110 G~y~~~C~e~CG~~H--~~M~g~v~V~ 134 (135)
T 2cua_A 110 GEYRIICNQYCGLGH--QNMFGTIVVK 134 (135)
T ss_dssp EEEEEECCSCCSTTS--TTCEEEEEEE
T ss_pred EEEEEECcccCCCCc--CCCEEEEEEE
Confidence 999999987 566 5999999885
No 132
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=95.18 E-value=0.052 Score=48.54 Aligned_cols=44 Identities=11% Similarity=0.127 Sum_probs=39.5
Q ss_pred cceEeeCCCcEEEEEEEec--CceeEEEEeechhhhhccceEEEEEe
Q 047497 517 RNTVGVPSGGWVAIRFLAD--NPGVWFMHCHLEVHTSWGLKMAWIVL 561 (580)
Q Consensus 517 rDTv~vp~g~~v~irf~ad--npG~wl~HCHil~H~d~GM~~~~~V~ 561 (580)
..+..|.+|+...|.|.++ .||.|-|+|-+--|.. ||-+.|.|.
T Consensus 121 ~~t~~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 121 AHTKLIGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp EECCCBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred ccceeeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 4566789999999999987 8999999999989988 999999986
No 133
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=94.90 E-value=0.037 Score=47.37 Aligned_cols=90 Identities=14% Similarity=0.186 Sum_probs=61.2
Q ss_pred EEEecCC-CEEEEEEecCCCCC--CCCCCccccCCcEEEEEecc-----------C---cCCCCCCCCCCCCCCCCccce
Q 047497 457 LVVLPFN-SSVELIMQDTSILG--AESHPLHLHGFNFFVVGQGF-----------G---NFDPNKDPTKFNLVDPVERNT 519 (580)
Q Consensus 457 ~~~v~~g-~~v~~vi~n~~~~~--~~~HP~HlHG~~F~Vl~~g~-----------g---~~~~~~~~~~~~~~~p~~rDT 519 (580)
-+.++.| +.|.+++.|.+... .+.| .|-+...+. | .|-+.. ..-....+
T Consensus 19 ~i~V~~G~~~vtv~~~N~g~~~~~~m~H-------~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~-------~~~~~~~t 84 (129)
T 1cuo_A 19 SISVPASCAEFTVNFEHKGHMPKTGMGH-------NWVLAKSADVGDVAKEGAHAGADNNFVTPG-------DKRVIAFT 84 (129)
T ss_dssp EEEEETTCSEEEEEEEECSSSCHHHHCB-------CCEEEEGGGHHHHHHHHHTTCGGGTTSCTT-------CTTCSEEC
T ss_pred eEEEcCCCeEEEEEEEECCCCccccccc-------ceEEecCcchhhhHHHhhhccccccccccc-------cccceeee
Confidence 4788999 99999999965310 1234 444443220 0 010000 00112356
Q ss_pred EeeCCCcEEEEEEEec---CceeEEEEeechhhhhccceEEEEEe
Q 047497 520 VGVPSGGWVAIRFLAD---NPGVWFMHCHLEVHTSWGLKMAWIVL 561 (580)
Q Consensus 520 v~vp~g~~v~irf~ad---npG~wl~HCHil~H~d~GM~~~~~V~ 561 (580)
..|.||+...|.|.++ .||.|-|.|-+--|.. ||-+.+.|.
T Consensus 85 ~~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 85 PIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp CCBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred eEECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 6789999999999997 9999999999988988 899999886
No 134
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=93.75 E-value=0.39 Score=40.90 Aligned_cols=43 Identities=16% Similarity=0.167 Sum_probs=37.9
Q ss_pred ceEeeCCCcEEEEEEEec--Ccee-EEEEeechhhhhccceEEEEEe
Q 047497 518 NTVGVPSGGWVAIRFLAD--NPGV-WFMHCHLEVHTSWGLKMAWIVL 561 (580)
Q Consensus 518 DTv~vp~g~~v~irf~ad--npG~-wl~HCHil~H~d~GM~~~~~V~ 561 (580)
.|..|.||+...|.|.++ .+|. |-|.|-+--|.. ||-+.+.|.
T Consensus 83 ~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 83 HTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp ECCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred eeeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 456789999999999998 7865 999999988988 899999885
No 135
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=93.48 E-value=0.25 Score=42.10 Aligned_cols=44 Identities=18% Similarity=0.159 Sum_probs=38.8
Q ss_pred cceEeeCCCcEEEEEEEec--Cce-eEEEEeechhhhhccceEEEEEe
Q 047497 517 RNTVGVPSGGWVAIRFLAD--NPG-VWFMHCHLEVHTSWGLKMAWIVL 561 (580)
Q Consensus 517 rDTv~vp~g~~v~irf~ad--npG-~wl~HCHil~H~d~GM~~~~~V~ 561 (580)
..|..|.||+...|.|.+. .+| .|-|.|-+--|.. ||-+.+.|.
T Consensus 81 ~~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 81 AHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp EECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred ccceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 3466789999999999998 899 4999999999998 999999885
No 136
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=93.02 E-value=0.37 Score=42.99 Aligned_cols=72 Identities=18% Similarity=0.294 Sum_probs=53.5
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEecCc
Q 047497 458 VVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLADNP 537 (580)
Q Consensus 458 ~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~adnp 537 (580)
+.++.|+.|+|.+.|. +..|.|-+=.... -+.+.||....+.|.++.|
T Consensus 95 l~VP~G~~Vr~~vTS~----DViHsf~IP~lgi----------------------------k~da~PG~~n~~~~~~~kp 142 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSP----DVIHGFHVEGTNI----------------------------NVEVLPGEVSTVRYTFKRP 142 (168)
T ss_dssp EEEETTSEEEEEEECS----SSCEEEEETTSSC----------------------------EEEECTTBCEEEEEECCSC
T ss_pred EEEeCCCeEEEEEecC----CceEEEEECCCCe----------------------------EEEecCCceeEEEEEeCCC
Confidence 6788999999999984 2455544322111 1345678888899999999
Q ss_pred eeEEEEeec-hhhhhccceEEEEEe
Q 047497 538 GVWFMHCHL-EVHTSWGLKMAWIVL 561 (580)
Q Consensus 538 G~wl~HCHi-l~H~d~GM~~~~~V~ 561 (580)
|.|.+.|.. --+-+.+|...+.|+
T Consensus 143 G~y~g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 143 GEYRIICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp EEEEEECCSCCSTTGGGCEEEEEEE
T ss_pred EEEEEECCcCCCCCcCCCEEEEEEe
Confidence 999999985 445677999999886
No 137
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=92.41 E-value=0.59 Score=39.71 Aligned_cols=44 Identities=18% Similarity=0.199 Sum_probs=38.0
Q ss_pred cceEeeCCCcEEEEEEEec--Ccee-EEEEeechhhhhccceEEEEEe
Q 047497 517 RNTVGVPSGGWVAIRFLAD--NPGV-WFMHCHLEVHTSWGLKMAWIVL 561 (580)
Q Consensus 517 rDTv~vp~g~~v~irf~ad--npG~-wl~HCHil~H~d~GM~~~~~V~ 561 (580)
..|-.|.||+...|.|.++ .||. |-|.|-+--|.. ||-+.+.|.
T Consensus 82 ~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 82 AHTKVIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EECCCBCTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred eeeeeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 3455789999999999997 7876 999999999998 899999873
No 138
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=90.78 E-value=1.1 Score=37.69 Aligned_cols=96 Identities=13% Similarity=0.155 Sum_probs=58.4
Q ss_pred EEEecC-CCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccC-cC-CC--CCCC-CCC-C-CCCCCccceEeeCCCcEE
Q 047497 457 LVVLPF-NSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFG-NF-DP--NKDP-TKF-N-LVDPVERNTVGVPSGGWV 528 (580)
Q Consensus 457 ~~~v~~-g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g-~~-~~--~~~~-~~~-~-~~~p~~rDTv~vp~g~~v 528 (580)
-+.++. |+.|+++|.|.+.. |--.=||.|-+...+.- .. .. ...+ ..| . -.....-.|..|.||+..
T Consensus 19 ~i~V~~~Ge~V~~~l~N~G~~-----p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 19 AITVDKSCKQFTVNLSHPGNL-----PKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp EEEECTTCSEEEEEEECCSSC-----CHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred EEEEecCCCEEEEEEEECCcc-----cccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 467765 99999999997631 21112445555432100 00 00 0000 011 0 011234567789999999
Q ss_pred EEEEEec---CceeEEEEeechhhhhccceEEEEEe
Q 047497 529 AIRFLAD---NPGVWFMHCHLEVHTSWGLKMAWIVL 561 (580)
Q Consensus 529 ~irf~ad---npG~wl~HCHil~H~d~GM~~~~~V~ 561 (580)
.|.|.+. .+|.|-|-|- -|. ||-+.+.|.
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 9999987 8999999999 888 999999873
No 139
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=88.58 E-value=3.4 Score=34.38 Aligned_cols=73 Identities=15% Similarity=0.119 Sum_probs=50.9
Q ss_pred CCC--EEEEEEEecCCCCeEEEEEc-Cce--eeEEecCCCcC--------CceEEeEEEeCCCceEEEEEEcCCCCCCce
Q 047497 222 PGK--TYLLRLINAALNDELFFSIA-NHT--LTVVEADAIYV--------KPFETETLLIAPGQTTNVLLKTKPHYPSAT 288 (580)
Q Consensus 222 ~G~--~~rlRliN~~~~~~~~~~i~-gh~--~~via~DG~~v--------~P~~~d~l~l~pGeR~dv~v~~~~~~~~g~ 288 (580)
.|+ ...|.+.|.+.. ...|.+. |+. |.|...+|..+ -.+......|.|||...+-...++....|.
T Consensus 16 ~g~~v~~~ltv~N~s~~-~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSER-AIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSSS-CEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCCC-cEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 445 445777899844 4567775 555 44445557665 134668899999999999999985333399
Q ss_pred EEEEecc
Q 047497 289 FFMKARP 295 (580)
Q Consensus 289 y~i~~~~ 295 (580)
|.+++.-
T Consensus 95 Ytl~a~l 101 (120)
T 3isy_A 95 YEVKVTF 101 (120)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9998764
No 140
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=79.43 E-value=22 Score=29.44 Aligned_cols=72 Identities=10% Similarity=0.167 Sum_probs=45.6
Q ss_pred ECCCCCCcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCC---ccccccCCCCeEEEEEEECC--Cccce
Q 047497 56 VNGKFPGPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAY---ITQCPIQTGQSYVYNFTIVG--QRGTL 130 (580)
Q Consensus 56 ~Ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~---~tq~~i~PG~~~~Y~f~~~~--~~Gt~ 130 (580)
.|-.--.=+|+...|.+..+.|.+...+ ..| .|+||-.. +....|+||++.+|+...++ .+|+|
T Consensus 27 ~N~s~~~v~l~f~Sgq~~Df~v~d~~G~---~Vw--------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~Y 95 (120)
T 3isy_A 27 KNQSERAIEFQFSTGQKFELVVYDSEHK---ERY--------RYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTY 95 (120)
T ss_dssp EECSSSCEEEEESSSCCEEEEEECTTCC---EEE--------ETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEEE
T ss_pred EcCCCCcEEEEeCCCCEEEEEEECCCCC---EEE--------EccccchhhhhhceEEECCCCEEEEEEEeCCCCCCccE
Confidence 3433323467777777777777765332 111 34777542 33456899999999999963 58999
Q ss_pred eEeeCccc
Q 047497 131 WWHAHLSW 138 (580)
Q Consensus 131 wYH~H~~~ 138 (580)
..+.-.-+
T Consensus 96 tl~a~l~~ 103 (120)
T 3isy_A 96 EVKVTFKG 103 (120)
T ss_dssp EEEEEECC
T ss_pred EEEEEEEe
Confidence 88765433
No 141
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=64.03 E-value=29 Score=31.67 Aligned_cols=62 Identities=10% Similarity=0.057 Sum_probs=46.2
Q ss_pred EEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEecCCCcCCceEEeEEEeCCCceEEEEEEcCCCCCCceEEEEeccc
Q 047497 217 KLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARPY 296 (580)
Q Consensus 217 ~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~ 296 (580)
.+.+..|+.+||+|.+.. -.+.|.|..... .+..-||..-.+-+.++++ |.|..+|..+
T Consensus 42 ~l~lP~g~~V~~~lTS~D--ViHSF~IP~lgv----------------K~daiPGr~n~l~~~~~~p---G~y~g~CsE~ 100 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNS--VMHSFFIPRLGS----------------QIYAMAGMQTRLHLIANEP---GTYDGICAEI 100 (205)
T ss_dssp EEEEETTSCEEEEEEESS--SCEEEEEGGGTE----------------EEEECTTCCEEEEECCSSS---EEEEEEECSC
T ss_pred eEEEeCCCEEEEEEecCC--ceeeEEecccCc----------------EEEecCCceEEEEEEeCCC---eEEEEEcccc
Confidence 589999999999998764 455566553332 2345678888888888887 9999999977
Q ss_pred cCC
Q 047497 297 VTG 299 (580)
Q Consensus 297 ~~~ 299 (580)
++.
T Consensus 101 CG~ 103 (205)
T 1cyx_A 101 CGP 103 (205)
T ss_dssp CST
T ss_pred ccc
Confidence 654
No 142
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=52.17 E-value=37 Score=27.80 Aligned_cols=47 Identities=21% Similarity=0.346 Sum_probs=32.0
Q ss_pred CEEEEEEEecCCCC-eEEEEEcCc-eeeEEecCCCcCCceEEeEEEeCCCceEEEEEEc
Q 047497 224 KTYLLRLINAALND-ELFFSIANH-TLTVVEADAIYVKPFETETLLIAPGQTTNVLLKT 280 (580)
Q Consensus 224 ~~~rlRliN~~~~~-~~~~~i~gh-~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~ 280 (580)
-.|+|+|+|.+... .+.|.+.|. .+++++ +. .+.+.||+..++-|..
T Consensus 33 N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~g-------~~---~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 33 NTYTLKVINKTQQVQEYNLDVKGLNDVSWYG-------KQ---TIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEEECSSSCEEEEEEEESCSSCEEES-------CC---EEEECTTCEEEEEEEE
T ss_pred EEEEEEEEECCCCCEEEEEEEeCCcccEEeC-------CC---cEEECCCCEEEEEEEE
Confidence 37999999999665 567777663 233332 11 4899999977765554
No 143
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=45.54 E-value=45 Score=31.72 Aligned_cols=63 Identities=13% Similarity=0.184 Sum_probs=46.6
Q ss_pred eEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEecCCCcCCceEEeEEEeCCCceEEEEEEcCCCCCCceEEEEecc
Q 047497 216 FKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARP 295 (580)
Q Consensus 216 ~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~ 295 (580)
-.+.++.|+.+||++.+.. -.+.|.+.+...+ +..-||..-.+-+.++++ |.|..+|..
T Consensus 171 n~l~lP~g~~v~~~~tS~D--ViHsf~ip~l~~k----------------~da~PG~~n~~~~~~~~~---G~y~g~Cse 229 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGAD--VIHSWTVPAFGVK----------------QDAVPGRLAQLWFRAERE---GIFFGQCSE 229 (262)
T ss_dssp SCEEEETTSEEEEEEEESS--SCEEEEEGGGTEE----------------EEECBTCCEEEEEECCSC---EEEEECCCS
T ss_pred ceEEEecCCEEEEEEEECc--ccceeeecccCce----------------EEecCCceeEEEEecCCc---EEEEEEChH
Confidence 3589999999999998664 4555665543322 235578888888888888 999999997
Q ss_pred ccCC
Q 047497 296 YVTG 299 (580)
Q Consensus 296 ~~~~ 299 (580)
+++.
T Consensus 230 ~CG~ 233 (262)
T 2gsm_B 230 LCGI 233 (262)
T ss_dssp CCST
T ss_pred hccc
Confidence 7654
No 144
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=44.55 E-value=56 Score=31.66 Aligned_cols=76 Identities=18% Similarity=0.266 Sum_probs=53.1
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEec
Q 047497 456 KLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLAD 535 (580)
Q Consensus 456 ~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~ad 535 (580)
+-+.++.|+.|++.+.+.+ ..|.|.+=.... -+-+-||....+.|.++
T Consensus 189 N~lvlP~g~~V~~~ltS~D----ViHsf~iP~lg~----------------------------k~daiPG~~n~~~~~~~ 236 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD----VIHAWTIPAFAV----------------------------KQDAVPGRIAQLWFSVD 236 (298)
T ss_dssp SCEEEESSSEEEEEEEESS----SCEEEEEGGGTE----------------------------EEEECTTCCEEEEEECS
T ss_pred ceEEEEcCCEEEEEEEeCC----ccceeeEcccCc----------------------------eEEecCCceEEEEEEeC
Confidence 4578899999999999853 455444422211 12345677788899999
Q ss_pred CceeEEEEeechhh-hhccceEEEEEecC
Q 047497 536 NPGVWFMHCHLEVH-TSWGLKMAWIVLDG 563 (580)
Q Consensus 536 npG~wl~HCHil~H-~d~GM~~~~~V~~~ 563 (580)
.||.+...|.-.-- -+..|-..++|.+.
T Consensus 237 ~~G~y~g~CsE~CG~~Hs~M~~~v~vvs~ 265 (298)
T 3hb3_B 237 QEGVYFGQCSELCGINHAYMPIVVKAVSQ 265 (298)
T ss_dssp SSEEEEECCCSCCSTTTTSCCEEEEEECH
T ss_pred CCEEEEEEcccccCcCccCCeeEEEEEcH
Confidence 99999999986543 35567777777643
No 145
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=44.17 E-value=52 Score=29.93 Aligned_cols=74 Identities=22% Similarity=0.345 Sum_probs=51.9
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEec
Q 047497 456 KLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLAD 535 (580)
Q Consensus 456 ~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~ad 535 (580)
+-+.++.|+.|++.|.+.+ ..| .|+|-+.+ =-+.+-||....+.|.++
T Consensus 41 n~l~lP~g~~V~~~lTS~D----ViH-------SF~IP~lg---------------------vK~daiPGr~n~l~~~~~ 88 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNS----VMH-------SFFIPRLG---------------------SQIYAMAGMQTRLHLIAN 88 (205)
T ss_dssp SEEEEETTSCEEEEEEESS----SCE-------EEEEGGGT---------------------EEEEECTTCCEEEEECCS
T ss_pred ceEEEeCCCEEEEEEecCC----cee-------eEEecccC---------------------cEEEecCCceEEEEEEeC
Confidence 3578899999999998753 444 35553221 112344678888899999
Q ss_pred CceeEEEEeechhhh-hccceEEEEEe
Q 047497 536 NPGVWFMHCHLEVHT-SWGLKMAWIVL 561 (580)
Q Consensus 536 npG~wl~HCHil~H~-d~GM~~~~~V~ 561 (580)
.||.|...|-..-.. +..|-..++|.
T Consensus 89 ~pG~y~g~CsE~CG~~Hs~M~~~v~vv 115 (205)
T 1cyx_A 89 EPGTYDGICAEICGPGHSGMKFKAIAT 115 (205)
T ss_dssp SSEEEEEEECSCCSTTSTTCCEEEEEE
T ss_pred CCeEEEEEcccccccchhhceEEEEEE
Confidence 999999999876655 34566777776
No 146
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=43.54 E-value=79 Score=30.61 Aligned_cols=63 Identities=13% Similarity=0.188 Sum_probs=47.2
Q ss_pred eEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEecCCCcCCceEEeEEEeCCCceEEEEEEcCCCCCCceEEEEecc
Q 047497 216 FKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARP 295 (580)
Q Consensus 216 ~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~ 295 (580)
-.+.+..|+.+||++.+.. -.+.|.+..... .+..-||..-.+-+.++++ |.|..+|..
T Consensus 189 N~lvlP~g~~V~~~ltS~D--ViHsf~iP~lg~----------------k~daiPG~~n~~~~~~~~~---G~y~g~CsE 247 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD--VIHAWTIPAFAV----------------KQDAVPGRIAQLWFSVDQE---GVYFGQCSE 247 (298)
T ss_dssp SCEEEESSSEEEEEEEESS--SCEEEEEGGGTE----------------EEEECTTCCEEEEEECSSS---EEEEECCCS
T ss_pred ceEEEEcCCEEEEEEEeCC--ccceeeEcccCc----------------eEEecCCceEEEEEEeCCC---EEEEEEccc
Confidence 4689999999999998754 455566554332 2345678888888888888 999999997
Q ss_pred ccCC
Q 047497 296 YVTG 299 (580)
Q Consensus 296 ~~~~ 299 (580)
+++.
T Consensus 248 ~CG~ 251 (298)
T 3hb3_B 248 LCGI 251 (298)
T ss_dssp CCST
T ss_pred ccCc
Confidence 7654
No 147
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=41.30 E-value=19 Score=30.21 Aligned_cols=48 Identities=17% Similarity=0.163 Sum_probs=26.3
Q ss_pred EEEEEecCCCCc---eEEecCCccCCC---CCCCCCCCccccccCCCCeEEEEEE
Q 047497 74 LIKVMNHVQNNI---SIHWHGIRQLRS---GWADGPAYITQCPIQTGQSYVYNFT 122 (580)
Q Consensus 74 ~v~l~N~l~~~~---~iH~HG~~~~~~---~~~DGv~~~tq~~i~PG~~~~Y~f~ 122 (580)
+|++.|....+. +=||.=....+. -..+||-| .|.-|.||++|+|.=-
T Consensus 34 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG-~qP~L~PGe~f~YtSg 87 (127)
T 2f1e_A 34 SIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVG-EQPWLRPGEAFHYTSG 87 (127)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEESSBTT-BCCEECTTCEEEEEEE
T ss_pred EEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECCCeec-CCCcCCCCCceEEeCC
Confidence 477777776543 356653322211 01355543 3455799998777543
No 148
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=40.96 E-value=33 Score=28.72 Aligned_cols=70 Identities=21% Similarity=0.294 Sum_probs=39.4
Q ss_pred EEECCCCCCcEEEEecCCEEEEEEE---ecCCCCce--EE--ecCCccCC-CCCCCCCCCccccccCCCCeEEEEEEEC
Q 047497 54 ISVNGKFPGPRIVAREGDQLLIKVM---NHVQNNIS--IH--WHGIRQLR-SGWADGPAYITQCPIQTGQSYVYNFTIV 124 (580)
Q Consensus 54 ~~~Ng~~pgP~i~v~~Gd~v~v~l~---N~l~~~~~--iH--~HG~~~~~-~~~~DGv~~~tq~~i~PG~~~~Y~f~~~ 124 (580)
..++|- +.+.=.+..|..+.|.+. |....... +| ..|+..+- ....|+=..-..|||.+|+.++|.+.++
T Consensus 18 V~V~~C-~~~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 18 VNVSPC-PTQPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp EEEESC-SSSSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred EEECCC-CCCCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEeE
Confidence 344443 245666788888877776 22222222 32 23444431 1113443222469999999999998874
No 149
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=40.85 E-value=43 Score=27.92 Aligned_cols=70 Identities=17% Similarity=0.314 Sum_probs=40.0
Q ss_pred EEECCCCCCcEEEEecCCEEEEEEEe---cCCCC--ceEE--ecCCccCC-CCCCCCCCCccccccCCCCeEEEEEEEC
Q 047497 54 ISVNGKFPGPRIVAREGDQLLIKVMN---HVQNN--ISIH--WHGIRQLR-SGWADGPAYITQCPIQTGQSYVYNFTIV 124 (580)
Q Consensus 54 ~~~Ng~~pgP~i~v~~Gd~v~v~l~N---~l~~~--~~iH--~HG~~~~~-~~~~DGv~~~tq~~i~PG~~~~Y~f~~~ 124 (580)
..++|--+.+.=.+..|..+.|.+.= ..... +.+| ..|+..+- ....|+=-+ ..|||.+|+.++|.+..+
T Consensus 16 V~V~~C~~~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~-~~CPl~~G~~~~y~~~~~ 93 (129)
T 1xwv_A 16 VMVDGCHGSDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHF-MKCPLVKGQQYDAKYTWN 93 (129)
T ss_dssp EEETTCCBTSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGT-SCSSBCTTCEEEEEEEEE
T ss_pred EEECCCCCCCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCC-ccCcccCCEEEEEEEEeE
Confidence 44555313456678888888877762 22122 2233 24555442 111343212 569999999999998763
No 150
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=39.15 E-value=28 Score=27.92 Aligned_cols=52 Identities=13% Similarity=0.161 Sum_probs=33.4
Q ss_pred EEEEEEEecCCCCce---EEecCCccCCCCCCCCCCCccccccCCCCeEEEEEEEC-CCccc
Q 047497 72 QLLIKVMNHVQNNIS---IHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNFTIV-GQRGT 129 (580)
Q Consensus 72 ~v~v~l~N~l~~~~~---iH~HG~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~f~~~-~~~Gt 129 (580)
.++|+|+|-|+.+.+ ++..|.-... + --+....|.||++..+++... ..+|.
T Consensus 23 ~v~vsf~NPL~~~L~~c~~~vEG~GL~~-----~-~~~~~~~v~pg~~~~~~~~~~P~~~G~ 78 (102)
T 2xzz_A 23 EVQIVFKNPLPVTLTNVVFRLEGSGLQR-----P-KILNVGDIGGNETVTLRQSFVPVRPGP 78 (102)
T ss_dssp EEEEEEECCSSSCBCSEEEEEEETTTEE-----E-EEEEECCBCTTCEEEEEEEECCCSCSS
T ss_pred EEEEEEECCCCCcccCEEEEEECCCCCc-----c-eEEEcCcCCCCCEEEEEEEEecCcccc
Confidence 678999999987643 5665543211 1 011224589999999998873 55665
No 151
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=38.99 E-value=18 Score=30.20 Aligned_cols=44 Identities=27% Similarity=0.471 Sum_probs=0.0
Q ss_pred EEEEEecCCCC---ceEEec-----CCccCCCCCCCCCCCccccccCCCCeEEEE
Q 047497 74 LIKVMNHVQNN---ISIHWH-----GIRQLRSGWADGPAYITQCPIQTGQSYVYN 120 (580)
Q Consensus 74 ~v~l~N~l~~~---~~iH~H-----G~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~ 120 (580)
+|++.|....+ .+=||. |-..... .+||-| .|.-|.||++|+|.
T Consensus 33 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~--G~GVVG-~qP~L~PGe~f~Yt 84 (126)
T 1xvs_A 33 LITIKNLSSQTVQLMSRRWLITDADGKQTVVE--GDGVVG-EQPRIKANDEYTYS 84 (126)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTCCEEEEE--EESBTT-BCCEECTTCEEEEE
T ss_pred EEEEEECCCCCEEEEecEEEEEeCCCCEEEEE--CCceEc-CCCcCCCCCceEEe
No 152
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=38.18 E-value=76 Score=30.11 Aligned_cols=75 Identities=20% Similarity=0.340 Sum_probs=51.9
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEec
Q 047497 456 KLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLAD 535 (580)
Q Consensus 456 ~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~ad 535 (580)
+.+.++.|+.|++.+.+.+ ..|. |+|-+.| ...| +-||....+.|.++
T Consensus 171 n~l~lP~g~~v~~~~tS~D----ViHs-------f~ip~l~------------------~k~d---a~PG~~n~~~~~~~ 218 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGAD----VIHS-------WTVPAFG------------------VKQD---AVPGRLAQLWFRAE 218 (262)
T ss_dssp SCEEEETTSEEEEEEEESS----SCEE-------EEEGGGT------------------EEEE---ECBTCCEEEEEECC
T ss_pred ceEEEecCCEEEEEEEECc----ccce-------eeecccC------------------ceEE---ecCCceeEEEEecC
Confidence 4578899999999998753 4444 5442221 1123 34677778889999
Q ss_pred CceeEEEEeechhhh-hccceEEEEEec
Q 047497 536 NPGVWFMHCHLEVHT-SWGLKMAWIVLD 562 (580)
Q Consensus 536 npG~wl~HCHil~H~-d~GM~~~~~V~~ 562 (580)
.||.+...|--.-.. +..|-..++|.+
T Consensus 219 ~~G~y~g~Cse~CG~~H~~M~~~v~vv~ 246 (262)
T 2gsm_B 219 REGIFFGQCSELCGISHAYMPITVKVVS 246 (262)
T ss_dssp SCEEEEECCCSCCSTTGGGCCEEEEEEC
T ss_pred CcEEEEEEChHhcccCcccCeEEEEEEc
Confidence 999999999875544 445667777764
No 153
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=36.52 E-value=70 Score=31.70 Aligned_cols=16 Identities=19% Similarity=0.231 Sum_probs=13.7
Q ss_pred cccCCCCeEEEEEEEC
Q 047497 109 CPIQTGQSYVYNFTIV 124 (580)
Q Consensus 109 ~~i~PG~~~~Y~f~~~ 124 (580)
..|+||++.+.+|+++
T Consensus 95 ~~L~pG~Sve~~~dla 110 (343)
T 2x3c_A 95 QLLKAGQSLTVQAEVS 110 (343)
T ss_dssp EEECTTCEEEEEEECT
T ss_pred EEeCCCCeEEEEEehh
Confidence 3489999999999984
No 154
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=34.31 E-value=1.4e+02 Score=23.19 Aligned_cols=70 Identities=10% Similarity=0.105 Sum_probs=40.5
Q ss_pred EeCCCEEEEEEEecCCCCeEEEEEcC--ceeeEEecCCCcCCceEEeEEEeCCCceEEEEEEcCCCCCCceEEEEecc
Q 047497 220 VKPGKTYLLRLINAALNDELFFSIAN--HTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARP 295 (580)
Q Consensus 220 v~~G~~~rlRliN~~~~~~~~~~i~g--h~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~ 295 (580)
-+||+++++|++-....... ..+ -.+++..-+|..+.- -.........++.-+..+....-|.|.|++..
T Consensus 13 YrPGetV~~~~~~~~~~~~p---~~~~~~~v~l~dp~g~~v~~---~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 13 YKPGQTVKFRVVSMDENFHP---LNELIPLVYIQDPKGNRIAQ---WQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp ECTTCEEEEEEEEECGGGCB---CCCEEEEEEEECTTSCEEEE---EEEEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred cCCCCEEEEEEEEECCCCcC---CCCCceEEEEECCCCCEEEE---EEeecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 47899999998754322110 111 135566666653311 11222345567777777765555999999863
No 155
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=33.53 E-value=27 Score=29.77 Aligned_cols=44 Identities=23% Similarity=0.310 Sum_probs=0.0
Q ss_pred EEEEEecCCCC---ceEEec-----CCccCCCCCCCCCCCccccccCCCCeEEEE
Q 047497 74 LIKVMNHVQNN---ISIHWH-----GIRQLRSGWADGPAYITQCPIQTGQSYVYN 120 (580)
Q Consensus 74 ~v~l~N~l~~~---~~iH~H-----G~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~ 120 (580)
.|++.|....+ .+=||. |-..... .+||-| .|.-|.||++|+|.
T Consensus 38 ~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~--G~GVVG-eqPvL~PGe~F~Yt 89 (139)
T 1xq4_A 38 TVRITNTGSHPAQVISRHWIITDGEERVQEVR--GLGVVG-QQPLLAPGETFEYT 89 (139)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTSCEEEEE--EESSSS-CCCEECTTCEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEE--CCCeec-CCCcCCCCCceEEc
No 156
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=31.32 E-value=1.8e+02 Score=23.62 Aligned_cols=67 Identities=12% Similarity=0.021 Sum_probs=36.4
Q ss_pred CcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCCCC----c----cccccCCCCeEEEEEEECCCccc
Q 047497 62 GPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGPAY----I----TQCPIQTGQSYVYNFTIVGQRGT 129 (580)
Q Consensus 62 gP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~----~----tq~~i~PG~~~~Y~f~~~~~~Gt 129 (580)
|-+|.++.||++.|.|.-+-....+=......-...--.+|..- + ....+..|+...+.|++ .++|+
T Consensus 14 ~~~i~~~~Ge~~~I~L~~NPtTGY~W~~~~~~~~~~l~~~gl~~~s~y~~~~~~~~~vG~gG~~~~~f~a-~~~G~ 88 (116)
T 2c34_A 14 DKWVDTHVGKTTEIHLKGNPTTGYMWTRVGFVGKDVLSDEILEVVCKYTPTPSSTPMVGVGGIYVVLVKP-RKRGH 88 (116)
T ss_dssp CCCEEECSSCCEEEEEECCTTSSCEEEETTCTTSSCCCCSSEEEEEEEECCCCSSSSSCCCCEEEEEEEE-CSSSS
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCcEEEEecCCCcccccccccEEEEeEEeCCCCCCCcCCCceEEEEEEE-eCCce
Confidence 45899999999999998664433332222211000000111100 0 00124567889999997 67775
No 157
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=31.16 E-value=24 Score=29.87 Aligned_cols=44 Identities=20% Similarity=0.315 Sum_probs=0.0
Q ss_pred EEEEEecCCCC---ceEEec-----CCccCCCCCCCCCCCccccccCCCCeEEEE
Q 047497 74 LIKVMNHVQNN---ISIHWH-----GIRQLRSGWADGPAYITQCPIQTGQSYVYN 120 (580)
Q Consensus 74 ~v~l~N~l~~~---~~iH~H-----G~~~~~~~~~DGv~~~tq~~i~PG~~~~Y~ 120 (580)
+|++.|....+ .+=||. |-..... .+||-| .|.-|.||++|+|.
T Consensus 33 ~ItI~N~~~~~vQL~sRhW~Itd~~g~~~eV~--G~GVVG-eqP~L~PGe~F~Yt 84 (134)
T 1tza_A 33 TITIINLGEQAAKLETRHWIITDANGKTSEVQ--GAGVVG-ETPTIPPNTAYQYT 84 (134)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEE--EESBTT-BCCEECTTEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEE--cCceEc-CCCcCCCCCceEEc
No 158
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=30.99 E-value=2.1e+02 Score=23.78 Aligned_cols=64 Identities=13% Similarity=0.199 Sum_probs=35.6
Q ss_pred CcEEEEecCCEEEEEEEecCCCCceEEecCCccCCCCCCCCC--------CCccccccCCCCeEEEEEEECCCccc
Q 047497 62 GPRIVAREGDQLLIKVMNHVQNNISIHWHGIRQLRSGWADGP--------AYITQCPIQTGQSYVYNFTIVGQRGT 129 (580)
Q Consensus 62 gP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv--------~~~tq~~i~PG~~~~Y~f~~~~~~Gt 129 (580)
|-+|.++.||++.|.|.-+-....+=..... ....-.|++ |. ....+..|++..+.|++ .++|+
T Consensus 32 ~~~I~v~~Ge~~~I~L~~NPTTGY~W~~~~~--~~~~L~~~~~~v~~~y~p~-~~~~vGagG~~~w~f~A-~~~G~ 103 (131)
T 2h7w_A 32 GATLTVAVGELVEIQLPSNPTTGFAWYFEGG--TKESPNESMFTVENKYFPP-DSKLLGAGGTEHFHVTV-KAAGT 103 (131)
T ss_dssp TCEEEECTTCEEEEEEEECGGGSCEEEBTTT--BSSCSCTTTEEEEEEEECC-TTCCTTCCEEEEEEEEE-CSSEE
T ss_pred CCEEEEeCCCEEEEEeCCCCCCCeEEEEecC--CCccccccceeecceeeeC-CCCCcCCCcEEEEEEEE-ccCce
Confidence 5699999999999999865432222111111 111112222 10 01134567888888887 66775
No 159
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=28.79 E-value=90 Score=28.88 Aligned_cols=63 Identities=8% Similarity=0.067 Sum_probs=45.0
Q ss_pred eEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEecCCCcCCceEEeEEEeCCCceEEEEEEcCCCCCCceEEEEecc
Q 047497 216 FKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARP 295 (580)
Q Consensus 216 ~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~ 295 (580)
..+.+..|+.+|+++..+. -.+.|.+..... .+..-||..-.+-+.++++ |.|..+|..
T Consensus 140 n~lvlP~~~~Vr~~vtS~D--ViHsf~vP~lg~----------------K~DaiPGr~n~~~~~~~~~---G~y~g~Cse 198 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSED--VLHSWAVPSLGL----------------KTDAIPGRLNQTTLMSSRP---GLYYGQCSE 198 (227)
T ss_dssp SCEEEETTSCEEEEEEESS--SCEEEEEGGGTE----------------EEEECTTCCEEEEECCSSC---EEEEECCCS
T ss_pred ceEEEecCCEEEEEEEeCc--ccceeeecccCc----------------EEEecCCceEEEEEecCCc---EEEEEEehh
Confidence 4689999999999998654 445555553322 2235577777777778887 999999987
Q ss_pred ccCC
Q 047497 296 YVTG 299 (580)
Q Consensus 296 ~~~~ 299 (580)
+++.
T Consensus 199 ~CG~ 202 (227)
T 1v54_B 199 ICGS 202 (227)
T ss_dssp CCST
T ss_pred hccc
Confidence 7654
No 160
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=27.74 E-value=1e+02 Score=30.86 Aligned_cols=53 Identities=17% Similarity=0.305 Sum_probs=31.9
Q ss_pred CCCCCCccccccCCCCeEEEEEEEC-CCccceeEeeCcccccc-cceee---EEEeCC
Q 047497 100 ADGPAYITQCPIQTGQSYVYNFTIV-GQRGTLWWHAHLSWLRS-TLYGP---IIILPK 152 (580)
Q Consensus 100 ~DGv~~~tq~~i~PG~~~~Y~f~~~-~~~Gt~wYH~H~~~~~~-Gl~G~---liV~~~ 152 (580)
..|.|-.....|..|+.+.|+..+. ..+|+|--|+-.+-... .+.|+ +.|++.
T Consensus 101 ing~p~~~s~~l~~G~~Y~fki~lkaR~PG~~HVH~~lNV~~~Gp~iGPG~~v~I~G~ 158 (419)
T 3rfr_A 101 IGEQFAPRSVSLEIGKDYAFSINLRGRRAGRWHVHAQINVEGGGPIIGPGQWIEIKGD 158 (419)
T ss_dssp ETTEECSSCBCCCTTCEEEEEEEEEECSCEEEEEEEEEEETTTEEEEEEEEEEEEESC
T ss_pred hcCcCCcceEEecCCCeEeEEEEEecccCcccccceeEeeccCCCCcCCceEEEEccc
Confidence 3443333336789999999998774 77999644443333333 25555 556655
No 161
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=27.65 E-value=77 Score=26.13 Aligned_cols=67 Identities=24% Similarity=0.238 Sum_probs=41.5
Q ss_pred ECCCCCC------cEEEEecC-CEEEEEEEecCCCCce--EEecCCccCCCCCCC-----C----CCCccccccCCCCeE
Q 047497 56 VNGKFPG------PRIVAREG-DQLLIKVMNHVQNNIS--IHWHGIRQLRSGWAD-----G----PAYITQCPIQTGQSY 117 (580)
Q Consensus 56 ~Ng~~pg------P~i~v~~G-d~v~v~l~N~l~~~~~--iH~HG~~~~~~~~~D-----G----v~~~tq~~i~PG~~~ 117 (580)
.+...|| -.|++++| ++++|+|.|.-+.|+- -|+|=.+..+.--.| | .|.-|-.-..||++.
T Consensus 4 ~~~miPGei~~~~g~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k 83 (126)
T 4ubp_B 4 NNYIVPGEYRVAEGEIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEM 83 (126)
T ss_dssp -CCCCTTCEECCSSEEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEE
T ss_pred CCCCCCCeEEeCCCCEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeE
Confidence 3445566 35788888 5899999999988765 577766555432122 1 222233445677777
Q ss_pred EEEEE
Q 047497 118 VYNFT 122 (580)
Q Consensus 118 ~Y~f~ 122 (580)
+-+.-
T Consensus 84 ~V~LV 88 (126)
T 4ubp_B 84 EVELT 88 (126)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76664
No 162
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=27.65 E-value=77 Score=26.13 Aligned_cols=67 Identities=24% Similarity=0.238 Sum_probs=41.5
Q ss_pred ECCCCCC------cEEEEecC-CEEEEEEEecCCCCce--EEecCCccCCCCCCC-----C----CCCccccccCCCCeE
Q 047497 56 VNGKFPG------PRIVAREG-DQLLIKVMNHVQNNIS--IHWHGIRQLRSGWAD-----G----PAYITQCPIQTGQSY 117 (580)
Q Consensus 56 ~Ng~~pg------P~i~v~~G-d~v~v~l~N~l~~~~~--iH~HG~~~~~~~~~D-----G----v~~~tq~~i~PG~~~ 117 (580)
.+...|| -.|++++| ++++|+|.|.-+.|+- -|+|=.+..+.--.| | .|.-|-.-..||++.
T Consensus 4 ~~~miPGei~~~~g~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k 83 (126)
T 4ac7_B 4 NNYIVPGEYRVAEGEIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEM 83 (126)
T ss_dssp -CCCCTTCEECCSSEEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEE
T ss_pred CCCCCCCeEEeCCCCEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeE
Confidence 3445566 35788888 5899999999988765 577766555432122 1 222233445677777
Q ss_pred EEEEE
Q 047497 118 VYNFT 122 (580)
Q Consensus 118 ~Y~f~ 122 (580)
+-+.-
T Consensus 84 ~V~LV 88 (126)
T 4ac7_B 84 EVELT 88 (126)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76664
No 163
>2cio_B Inhibitor of cysteine peptidase; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Trypanosoma brucei}
Probab=25.75 E-value=2.4e+02 Score=22.98 Aligned_cols=21 Identities=14% Similarity=0.184 Sum_probs=16.5
Q ss_pred CcEEEEecCCEEEEEEEecCC
Q 047497 62 GPRIVAREGDQLLIKVMNHVQ 82 (580)
Q Consensus 62 gP~i~v~~Gd~v~v~l~N~l~ 82 (580)
+-+|.++.||++.|.|.-+-.
T Consensus 12 ~~ti~l~~Ge~~~I~L~~NPt 32 (121)
T 2cio_B 12 NKTIRMVIGETFTIELESNPT 32 (121)
T ss_pred CcEEEEcCCCEEEEEeCCCCC
Confidence 456999999999999875543
No 164
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=25.32 E-value=69 Score=26.21 Aligned_cols=33 Identities=21% Similarity=0.441 Sum_probs=28.3
Q ss_pred EEEecCceeEEEEeechhhhhccceEEE-EEecC
Q 047497 531 RFLADNPGVWFMHCHLEVHTSWGLKMAW-IVLDG 563 (580)
Q Consensus 531 rf~adnpG~wl~HCHil~H~d~GM~~~~-~V~~~ 563 (580)
.|..+.+|..-|=|=...|=..||-+.+ .|...
T Consensus 73 ~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~ 106 (116)
T 1x9u_A 73 KIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAG 106 (116)
T ss_dssp EEECCSCEEEEEECCSTTTTTTTCEEEEEEECC-
T ss_pred EEEECCCCCEEEECCCCCccccCCEEEEEEECCC
Confidence 4566889999999999999999999999 88654
No 165
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=25.27 E-value=67 Score=31.38 Aligned_cols=63 Identities=11% Similarity=0.082 Sum_probs=45.6
Q ss_pred eEEEEeCCCEEEEEEEecCCCCeEEEEEcCceeeEEecCCCcCCceEEeEEEeCCCceEEEEEEcCCCCCCceEEEEecc
Q 047497 216 FKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARP 295 (580)
Q Consensus 216 ~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~ 295 (580)
..+.+..|+.+||++.... -.+.|.+.+... .+..-||..-.+-+.++++ |.|..+|..
T Consensus 151 n~l~lP~g~~V~~~lTS~D--ViHsf~IP~lg~----------------k~DaiPGr~n~~~~~~~~~---G~y~g~CsE 209 (315)
T 1fft_B 151 NEIAFPANTPVYFKVTSNS--VMNSFFIPRLGS----------------QIYAMAGMQTRLHLIANEP---GTYDGISAS 209 (315)
T ss_dssp SBCCCCSSSEEEEEECBSS--SCEEEEEGGGTE----------------EEEECBTSCEEEEEECCSC---BCCEEBCCS
T ss_pred ceEEEeCCCEEEEEEEeCC--ccceeeecccCc----------------EEeecCCcceeeEEecCCC---eEEEEeccc
Confidence 3578899999999997543 455555553322 2345678888888888888 999999987
Q ss_pred ccCC
Q 047497 296 YVTG 299 (580)
Q Consensus 296 ~~~~ 299 (580)
+++.
T Consensus 210 ~CG~ 213 (315)
T 1fft_B 210 YSGP 213 (315)
T ss_dssp CCST
T ss_pred cchh
Confidence 7654
No 166
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=24.54 E-value=1.5e+02 Score=27.35 Aligned_cols=76 Identities=14% Similarity=0.343 Sum_probs=51.3
Q ss_pred ceEEEecCCCEEEEEEecCCCCCCCCCCccccCCcEEEEEeccCcCCCCCCCCCCCCCCCCccceEeeCCCcEEEEEEEe
Q 047497 455 TKLVVLPFNSSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPTKFNLVDPVERNTVGVPSGGWVAIRFLA 534 (580)
Q Consensus 455 ~~~~~v~~g~~v~~vi~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~g~~v~irf~a 534 (580)
.+.+.++.|+.|++.+.+.+ ..|. |+|=+.| ...| .-||..-.+.|.+
T Consensus 139 dn~lvlP~~~~Vr~~vtS~D----ViHs-------f~vP~lg------------------~K~D---aiPGr~n~~~~~~ 186 (227)
T 1v54_B 139 DNRVVLPMEMTIRMLVSSED----VLHS-------WAVPSLG------------------LKTD---AIPGRLNQTTLMS 186 (227)
T ss_dssp SSCEEEETTSCEEEEEEESS----SCEE-------EEEGGGT------------------EEEE---ECTTCCEEEEECC
T ss_pred CceEEEecCCEEEEEEEeCc----ccce-------eeecccC------------------cEEE---ecCCceEEEEEec
Confidence 34578899999999998743 4454 5442221 1123 3457777788899
Q ss_pred cCceeEEEEeechhhh-hccceEEEEEec
Q 047497 535 DNPGVWFMHCHLEVHT-SWGLKMAWIVLD 562 (580)
Q Consensus 535 dnpG~wl~HCHil~H~-d~GM~~~~~V~~ 562 (580)
+.||.+...|.-.-.. +.-|-..++|.+
T Consensus 187 ~~~G~y~g~Cse~CG~~Hs~M~~~v~vv~ 215 (227)
T 1v54_B 187 SRPGLYYGQCSEICGSNHSFMPIVLELVP 215 (227)
T ss_dssp SSCEEEEECCCSCCSTTGGGCCEEEEEEC
T ss_pred CCcEEEEEEehhhcccccccCeEEEEEEc
Confidence 9999999999876554 345666666654
No 167
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=24.49 E-value=25 Score=29.45 Aligned_cols=23 Identities=17% Similarity=0.172 Sum_probs=18.9
Q ss_pred EEEEeCCCEEEEEEEecCCCCeE
Q 047497 217 KLKVKPGKTYLLRLINAALNDEL 239 (580)
Q Consensus 217 ~l~v~~G~~~rlRliN~~~~~~~ 239 (580)
.|+|+.||++||.+.|-+..+.+
T Consensus 72 ~InV~~GETVrF~v~nkt~~W~F 94 (131)
T 2wtp_A 72 YVNVDSGETVAFRAGEKIVAWTF 94 (131)
T ss_dssp EEEEETTCEEEEEETTEEEEEEE
T ss_pred EEEecCCCEEEEEeCCcEEEEEE
Confidence 39999999999999998855544
No 168
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=23.98 E-value=24 Score=28.05 Aligned_cols=24 Identities=25% Similarity=0.249 Sum_probs=21.4
Q ss_pred EEEEECCCCCCcEEEEecCCEEEE
Q 047497 52 SIISVNGKFPGPRIVAREGDQLLI 75 (580)
Q Consensus 52 ~~~~~Ng~~pgP~i~v~~Gd~v~v 75 (580)
..+++||+.-.+.-.++.||+|+|
T Consensus 59 ~~V~Vng~~v~~d~~L~dGDRVEI 82 (97)
T 2hj1_A 59 NKIGIFSRPIKLTDVLKEGDRIEI 82 (97)
T ss_dssp SEEEEEECSCCTTCBCCTTCEEEE
T ss_pred cEEEEcCEECCCCccCCCCCEEEE
Confidence 468999999888888999999987
No 169
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=23.70 E-value=2.6e+02 Score=27.55 Aligned_cols=71 Identities=17% Similarity=0.161 Sum_probs=43.7
Q ss_pred CEEEEEEEecCCCCeEEEE---EcC---ceeeEEecCCCcC----------CceEEeEEEeCCCceEEEEEEcCCC---C
Q 047497 224 KTYLLRLINAALNDELFFS---IAN---HTLTVVEADAIYV----------KPFETETLLIAPGQTTNVLLKTKPH---Y 284 (580)
Q Consensus 224 ~~~rlRliN~~~~~~~~~~---i~g---h~~~via~DG~~v----------~P~~~d~l~l~pGeR~dv~v~~~~~---~ 284 (580)
-.+..-|-|.|....--|. +|+ ..|.| ..||..+ .|..-+-+.|.|||.+++.++.... .
T Consensus 38 ~~vk~tvtN~g~~~~~lLk~~~lD~~~~~~~~V-~~~G~~v~f~Gi~~~~~~~~~d~f~~L~pG~Sve~~~dla~~ydLs 116 (343)
T 2x3c_A 38 VRVNLTLTNTGDKPIRLLKWQLPGSDDAPLFLV-ERDGQPVSYEGALIKRAAPTDKDFQLLKAGQSLTVQAEVSGLYDMS 116 (343)
T ss_dssp CEEEEEEEECSSSCEEEEGGGSCSSSCCCCEEE-EETTEECCBCSCCCCCCCCCGGGEEEECTTCEEEEEEECTTTBTCC
T ss_pred eEEEEEEEeCCCCceEeeccCCCCcCccceEEE-EeCCcccceeeEEEeccCCChhhcEEeCCCCeEEEEEehhhccccC
Confidence 4556666676644321121 222 23455 4666554 1323478999999999999999752 2
Q ss_pred CCceEEEEecc
Q 047497 285 PSATFFMKARP 295 (580)
Q Consensus 285 ~~g~y~i~~~~ 295 (580)
.+|.|.+++..
T Consensus 117 ~gG~y~v~~~g 127 (343)
T 2x3c_A 117 AQGQYSIRYQL 127 (343)
T ss_dssp SCEEEEEEEC-
T ss_pred CCceEEEEEee
Confidence 35999999864
No 170
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=22.87 E-value=1.5e+02 Score=29.66 Aligned_cols=58 Identities=21% Similarity=0.316 Sum_probs=33.4
Q ss_pred CCCCCcEEEEecCCEEEEEEEecCCCCce--------EEecCCccCC--CCCCC------CCCCccccccCCCCeEEEEE
Q 047497 58 GKFPGPRIVAREGDQLLIKVMNHVQNNIS--------IHWHGIRQLR--SGWAD------GPAYITQCPIQTGQSYVYNF 121 (580)
Q Consensus 58 g~~pgP~i~v~~Gd~v~v~l~N~l~~~~~--------iH~HG~~~~~--~~~~D------Gv~~~tq~~i~PG~~~~Y~f 121 (580)
=+.||-+++ +.++|+|+.+++.. ++|-.-.+.. ..+.| |.- +..||+|||+.+.+.
T Consensus 293 Y~vpgR~l~------~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~--s~~pI~PGETrt~~V 364 (419)
T 3rfr_A 293 YKVPGRELT------INVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS--NDDVIAPGESKEIVV 364 (419)
T ss_dssp EESSSSEEE------EEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC--CCCCBCTTCEEEEEE
T ss_pred EecCCcEEE------EEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC--CCCCcCCCcceEEEE
Confidence 356666664 45778888765432 3333222111 11112 443 334899999999999
Q ss_pred EE
Q 047497 122 TI 123 (580)
Q Consensus 122 ~~ 123 (580)
++
T Consensus 365 ~a 366 (419)
T 3rfr_A 365 KI 366 (419)
T ss_dssp EE
T ss_pred Ee
Confidence 98
No 171
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=22.27 E-value=1.1e+02 Score=25.78 Aligned_cols=33 Identities=24% Similarity=0.435 Sum_probs=29.1
Q ss_pred EEe-cCceeEEEEeechhhhhccceEEEEEecCC
Q 047497 532 FLA-DNPGVWFMHCHLEVHTSWGLKMAWIVLDGK 564 (580)
Q Consensus 532 f~a-dnpG~wl~HCHil~H~d~GM~~~~~V~~~~ 564 (580)
|.. +.+|.+-|=|=+..|=..||-+.+.|....
T Consensus 77 v~L~~~~G~~YFicg~~gHC~~GmKl~I~V~~~~ 110 (138)
T 1jer_A 77 IERLDELGMHYFVCTVGTHCSNGQKLSINVVAAN 110 (138)
T ss_dssp EEECCSSEEEEEECCSTTTGGGTCEEEEEEECCC
T ss_pred EEeccCCcCEEEEcCCCCccccCCEEEEEEcCCC
Confidence 456 889999999999999999999999997653
No 172
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=22.26 E-value=3.3e+02 Score=22.42 Aligned_cols=67 Identities=13% Similarity=0.065 Sum_probs=42.4
Q ss_pred EEeCCCEE--EEEEEecCCCCeEEEEEcCceeeEEecCCCcCCceEEeEEEeCCCceEEEEEEcCCCCCCceEEEEecc
Q 047497 219 KVKPGKTY--LLRLINAALNDELFFSIANHTLTVVEADAIYVKPFETETLLIAPGQTTNVLLKTKPHYPSATFFMKARP 295 (580)
Q Consensus 219 ~v~~G~~~--rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~~~g~y~i~~~~ 295 (580)
.+.+|+.+ +..+-|.|....-.+.+ .++ .||..+. ...+.|++|+.-.|.+...... .|.|.|.+..
T Consensus 28 ~v~~G~~~ti~vtV~N~G~~~a~~~~V-----~ly-vng~~v~---t~~v~La~G~s~tv~f~~~~~~-~G~~~v~AvV 96 (127)
T 3idu_A 28 VVGVNKLAEYEVHVKNLGGIGVPSTKV-----RVY-INGTLYK---NWTVSLGPKEEKVLTFNWTPTQ-EGMYRINATV 96 (127)
T ss_dssp EECTTCCEEEEEEEEECSSSCEEEEEE-----EEE-ETTEEEE---EEEEEECTTCEEEEEEEECCSS-CEEEEEEEEE
T ss_pred cccCCCEEEEEEEEEECCCCccCCcEE-----EEE-ECCEEEe---eEEeccCCCCeEEEEEEEEcCC-CcEEEEEEEE
Confidence 56677754 56678999776443332 222 2665432 2245799999988888875421 2899888763
No 173
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=21.02 E-value=1.7e+02 Score=27.14 Aligned_cols=13 Identities=23% Similarity=0.583 Sum_probs=11.3
Q ss_pred eEEEeCCCceEEE
Q 047497 264 ETLLIAPGQTTNV 276 (580)
Q Consensus 264 d~l~l~pGeR~dv 276 (580)
..|.|.|||++.+
T Consensus 172 ~~i~L~PGESiTl 184 (246)
T 3kmh_A 172 SQLRLSPGESICL 184 (246)
T ss_dssp CEEEECTTCEEEE
T ss_pred CEEEECCCCeEec
Confidence 6889999999875
Done!