Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>047498
MTLNLSLCSPNFISSSSTPRFGKIHETSSNPNNNTSALLSFLLAAKKATRLRGFRIEASL
SESENGVVEEELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDL
ALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDIS
RVGVSPGEEVPFGKVVRCPTCLIAVAVAQPQHGIQIVSCAKCRYKYELVSGDIVSIHSEE
ISMDIPAWKRGLRFLQIMKQRIPAAVHSIVVQTPSGMARTHRFATETVDLPAQVGERITV
SSAAPSNVYREVGPFKFSPKALNFYPGEPLCLTNHKDGRESQLLRAPTKDRNHSLLNPVS
LVPLLAVLATGDAASRVIDPSLPQFLSVAAVASLAVGVTLNNLIFPQLSQLPQKSVDTIA
IRQQLLSQYDLLQSRIKDLKEAAEKEVWMLARMCQLENKIYAVGEPSYRARKSRVKRVRE
GLQNSLRGRIELIDSYARISSMIEIEIEMDSDVLAAEAVSSAESISEQIQQIMELENLEE
KWRLQAEANDEAERLINSQAMPTEQS

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  047498
        (566 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2014220 - symbol:AT1G64430 "AT1G64430" species...  1492  5.8e-153  1


>TAIR|locus:2014220 [details] [associations]
            symbol:AT1G64430 "AT1G64430" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] InterPro:IPR002885 EMBL:CP002684
            GenomeReviews:CT485782_GR PROSITE:PS51375 EMBL:AY065419
            EMBL:AY142664 IPI:IPI00531854 RefSeq:NP_001031231.1
            RefSeq:NP_176624.2 UniGene:At.28627 ProteinModelPortal:Q8VYZ8
            PRIDE:Q8VYZ8 EnsemblPlants:AT1G64430.1 EnsemblPlants:AT1G64430.2
            GeneID:842751 KEGG:ath:AT1G64430 TAIR:At1g64430
            HOGENOM:HOG000084535 InParanoid:Q8VYZ8 OMA:RYQYELF PhylomeDB:Q8VYZ8
            ProtClustDB:CLSN2690479 ArrayExpress:Q8VYZ8 Genevestigator:Q8VYZ8
            Uniprot:Q8VYZ8
        Length = 559

 Score = 1492 (530.3 bits), Expect = 5.8e-153, P = 5.8e-153
 Identities = 291/502 (57%), Positives = 360/502 (71%)

Query:    59 SLSESENGVVEEELLSRVSGAKDASEVLEIVAES-SKRSGGVLTVDECCLIINAAIDRGN 117
             S ++  + ++++ELLS VS  +DA E L ++++      GG++ +++C  II+AA+ RGN
Sbjct:    62 SAADVSSSILDDELLSSVSAVRDADEALAMISDRFGSNRGGIVELEDCRSIISAAVSRGN 121

Query:   118 TDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLID 177
              DLALSIFY MR+SFD G S+N    DRW WSRPDV VYT LV  LAASL+VSD+LR+I 
Sbjct:   122 VDLALSIFYTMRASFDLGGSDN----DRWSWSRPDVEVYTMLVNGLAASLRVSDSLRIIR 177

Query:   178 DISRVGVSPGEEVPFGKVVRCPTCLIAVAVAQPQHGIQIVSCAKCRYKYELVSGDIVSIH 237
             DI RVG+SP EEVPFGK+VRCP+CLIA+AVAQPQHG+QIVSCA CRY+YEL SGDI SI 
Sbjct:   178 DICRVGISPAEEVPFGKIVRCPSCLIAIAVAQPQHGVQIVSCANCRYQYELFSGDITSID 237

Query:   238 SEEISMDIPAWKRGLRFLQIMKQRIPAAVHSIVVQTPSGMARTHRFATETVDLPAQVGER 297
             SEE+  DIP W++GLR +QI K +I ++VHSIVVQTPSG ARTHRFATET +LPAQ GER
Sbjct:   238 SEELGKDIPLWEKGLRLIQIKKNKITSSVHSIVVQTPSGTARTHRFATETAELPAQEGER 297

Query:   298 ITVSSAAPSNVYREVGPFKFSPKALNFYPGEPLCLTNHKDGRESQLLRAPTKDRNHXXXX 357
             +T++SAAPSNVYR+VGPFKF  KA NFYPGEP+ LT HKDGRES LLR P+KD +     
Sbjct:   298 VTIASAAPSNVYRQVGPFKFISKAPNFYPGEPMSLTKHKDGRESILLRPPSKDGDKILQP 357

Query:   358 XXXXXXXXXXXXTGDAASRVIDPSLPQFXXXXXXXXXXXXXTLNNLIFPQLSQLPQKSVD 417
                         TGDAAS VIDPSLPQ              T+N+ + P+L+QLP+++VD
Sbjct:   358 SFLIPLLAILA-TGDAASGVIDPSLPQLLSVATVTSLAIGATVNSFVLPKLNQLPERTVD 416

Query:   418 TIAIRXXXXXXXXXXXXRIKDLKEAAEKEVWMLARMCQLENKIYAVGEPSYRARKSRVKR 477
              + I+            RI+DLKEA EKEVWMLARMCQLENKI AVGEP+YR R++RVK+
Sbjct:   417 VVGIKQQLLSQYDVLQRRIRDLKEAVEKEVWMLARMCQLENKILAVGEPAYRTRRTRVKK 476

Query:   478 VREGLQNSLRGRIELIDSYARXXXXXXXXXXXXXXVLXXXXXXXXXXXXXXXXXXMELEN 537
             VRE L+NS++G+I+LIDSYAR              VL                  MELEN
Sbjct:   477 VRESLENSIKGKIDLIDSYARISSMIEIEVEMDSDVLAAEAVNNTENIAQQIEQIMELEN 536

Query:   538 LEEKWRLQAEANDEAERLINSQ 559
             LEEKW++QAEANDEAERL++SQ
Sbjct:   537 LEEKWKIQAEANDEAERLLSSQ 558


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.131   0.373    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      566       480   0.00079  119 3  11 22  0.41    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  609 (65 KB)
  Total size of DFA:  263 KB (2140 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  35.63u 0.12s 35.75t   Elapsed:  00:00:01
  Total cpu time:  35.63u 0.12s 35.75t   Elapsed:  00:00:01
  Start:  Sat May 11 10:57:02 2013   End:  Sat May 11 10:57:03 2013

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