Query 047498
Match_columns 566
No_of_seqs 135 out of 187
Neff 3.6
Searched_HMMs 29240
Date Mon Mar 25 20:34:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047498.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047498hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g26_A Pentatricopeptide repea 99.9 4.8E-26 1.6E-30 238.7 9.2 152 70-223 30-222 (501)
2 3spa_A Mtrpol, DNA-directed RN 99.9 1.8E-25 6.1E-30 254.4 11.4 113 70-199 131-246 (1134)
3 4g26_A Pentatricopeptide repea 99.9 1.4E-22 4.9E-27 212.4 11.0 112 70-199 109-220 (501)
4 3spa_A Mtrpol, DNA-directed RN 99.8 3.6E-20 1.2E-24 211.3 6.9 97 101-215 126-233 (1134)
5 2xpi_A Anaphase-promoting comp 99.0 1.9E-09 6.4E-14 108.0 10.5 139 68-209 375-540 (597)
6 2xpi_A Anaphase-promoting comp 98.9 3.3E-09 1.1E-13 106.2 10.0 131 73-209 279-431 (597)
7 1w3b_A UDP-N-acetylglucosamine 98.3 4.3E-06 1.5E-10 79.8 11.0 109 70-199 241-349 (388)
8 1w3b_A UDP-N-acetylglucosamine 98.1 7.6E-06 2.6E-10 78.1 9.6 99 70-189 275-373 (388)
9 2fo7_A Synthetic consensus TPR 98.1 3.8E-05 1.3E-09 59.7 10.9 106 71-197 6-111 (136)
10 2fo7_A Synthetic consensus TPR 98.1 4.1E-05 1.4E-09 59.5 11.0 95 70-183 39-133 (136)
11 1na0_A Designed protein CTPR3; 98.0 6.6E-05 2.3E-09 58.2 11.7 94 70-182 13-106 (125)
12 2vq2_A PILW, putative fimbrial 97.9 8E-05 2.7E-09 63.8 10.7 97 71-186 13-110 (225)
13 2y4t_A DNAJ homolog subfamily 97.8 0.00012 4E-09 70.5 11.8 108 70-198 30-140 (450)
14 2y4t_A DNAJ homolog subfamily 97.8 6.6E-05 2.3E-09 72.2 9.2 126 69-200 63-222 (450)
15 2ho1_A Type 4 fimbrial biogene 97.8 7.4E-05 2.5E-09 66.3 8.9 96 72-186 43-138 (252)
16 4eqf_A PEX5-related protein; a 97.7 7.9E-05 2.7E-09 70.2 8.9 109 72-199 183-291 (365)
17 3as5_A MAMA; tetratricopeptide 97.7 0.00033 1.1E-08 57.7 10.5 109 70-199 46-154 (186)
18 2vq2_A PILW, putative fimbrial 97.6 0.00086 3E-08 57.4 12.7 105 72-196 82-189 (225)
19 3mkr_A Coatomer subunit epsilo 97.6 0.00018 6E-09 69.0 9.3 115 74-199 109-244 (291)
20 2gw1_A Mitochondrial precursor 97.6 0.00039 1.3E-08 67.4 11.8 102 74-197 14-115 (514)
21 2ho1_A Type 4 fimbrial biogene 97.6 0.00058 2E-08 60.5 11.8 61 69-131 74-134 (252)
22 3as5_A MAMA; tetratricopeptide 97.5 0.00098 3.4E-08 54.9 11.1 95 70-183 80-174 (186)
23 2q7f_A YRRB protein; TPR, prot 97.5 0.00057 2E-08 59.6 9.9 61 70-132 61-121 (243)
24 3mkr_A Coatomer subunit epsilo 97.5 0.00083 2.8E-08 64.3 11.6 110 71-187 39-162 (291)
25 1xnf_A Lipoprotein NLPI; TPR, 97.5 0.0011 3.8E-08 58.9 11.6 97 70-187 47-143 (275)
26 2kck_A TPR repeat; tetratricop 97.4 0.0019 6.5E-08 49.2 11.3 97 71-184 11-108 (112)
27 2lni_A Stress-induced-phosphop 97.4 0.0024 8.1E-08 50.4 12.0 93 71-182 21-113 (133)
28 4eqf_A PEX5-related protein; a 97.4 0.00091 3.1E-08 63.0 10.9 93 71-182 70-162 (365)
29 1fch_A Peroxisomal targeting s 97.4 0.0016 5.5E-08 60.6 12.2 94 71-183 69-162 (368)
30 2vyi_A SGTA protein; chaperone 97.4 0.0027 9.2E-08 49.4 11.5 97 71-188 17-113 (131)
31 1xnf_A Lipoprotein NLPI; TPR, 97.4 0.00067 2.3E-08 60.3 9.0 103 78-199 17-121 (275)
32 3cv0_A Peroxisome targeting si 97.3 0.0017 5.9E-08 58.8 11.7 95 70-183 176-270 (327)
33 1elw_A TPR1-domain of HOP; HOP 97.3 0.0032 1.1E-07 48.2 11.6 92 72-182 10-101 (118)
34 1fch_A Peroxisomal targeting s 97.3 0.0017 5.9E-08 60.4 11.6 94 70-182 221-314 (368)
35 2q7f_A YRRB protein; TPR, prot 97.3 0.0023 8E-08 55.7 11.3 107 71-198 96-202 (243)
36 2dba_A Smooth muscle cell asso 97.2 0.011 3.7E-07 47.6 14.0 93 70-182 32-128 (148)
37 1elr_A TPR2A-domain of HOP; HO 97.2 0.0021 7.3E-08 50.2 9.4 97 71-183 9-109 (131)
38 4gco_A Protein STI-1; structur 97.2 0.0016 5.6E-08 54.7 9.2 95 74-189 21-115 (126)
39 3hym_B Cell division cycle pro 97.2 0.0024 8.3E-08 57.9 10.8 116 72-199 165-280 (330)
40 3hym_B Cell division cycle pro 97.2 0.0023 7.9E-08 58.0 10.6 109 70-199 26-135 (330)
41 3uq3_A Heat shock protein STI1 97.2 0.0043 1.5E-07 54.2 11.7 95 70-183 143-237 (258)
42 3cv0_A Peroxisome targeting si 97.1 0.0041 1.4E-07 56.3 11.6 92 72-182 27-118 (327)
43 2xev_A YBGF; tetratricopeptide 97.1 0.0064 2.2E-07 48.5 11.4 92 74-183 10-106 (129)
44 3upv_A Heat shock protein STI1 97.0 0.0074 2.5E-07 48.8 11.0 90 74-182 12-101 (126)
45 3sz7_A HSC70 cochaperone (SGT) 97.0 0.0094 3.2E-07 50.6 12.0 97 71-188 16-112 (164)
46 2xcb_A PCRH, regulatory protei 97.0 0.0069 2.4E-07 50.7 10.8 91 73-182 25-115 (142)
47 3uq3_A Heat shock protein STI1 97.0 0.0043 1.5E-07 54.1 9.9 94 72-182 11-108 (258)
48 1hh8_A P67PHOX, NCF-2, neutrop 96.9 0.0069 2.4E-07 52.5 11.0 89 73-183 13-101 (213)
49 3q49_B STIP1 homology and U bo 96.9 0.0098 3.4E-07 47.9 11.0 93 71-182 14-106 (137)
50 3edt_B KLC 2, kinesin light ch 96.9 0.0018 6.1E-08 57.0 6.9 121 70-199 47-179 (283)
51 3u4t_A TPR repeat-containing p 96.9 0.0063 2.2E-07 54.3 10.4 106 74-199 11-118 (272)
52 3nf1_A KLC 1, kinesin light ch 96.9 0.002 6.7E-08 58.0 7.1 121 70-199 73-205 (311)
53 1a17_A Serine/threonine protei 96.9 0.014 4.8E-07 47.9 11.6 98 71-189 18-115 (166)
54 3edt_B KLC 2, kinesin light ch 96.8 0.0054 1.8E-07 54.0 9.6 103 70-182 89-198 (283)
55 3ieg_A DNAJ homolog subfamily 96.8 0.0093 3.2E-07 54.4 11.3 93 72-183 9-101 (359)
56 2gw1_A Mitochondrial precursor 96.8 0.0033 1.1E-07 61.0 8.5 108 70-199 241-348 (514)
57 3ieg_A DNAJ homolog subfamily 96.7 0.013 4.5E-07 53.4 11.5 91 73-182 127-217 (359)
58 3nf1_A KLC 1, kinesin light ch 96.7 0.0071 2.4E-07 54.3 9.6 103 70-182 115-224 (311)
59 3gyz_A Chaperone protein IPGC; 96.7 0.0096 3.3E-07 52.7 10.3 91 74-183 44-134 (151)
60 2vgx_A Chaperone SYCD; alterna 96.7 0.014 5E-07 50.1 11.1 92 72-182 27-118 (148)
61 3u4t_A TPR repeat-containing p 96.7 0.0091 3.1E-07 53.3 10.1 107 70-196 41-149 (272)
62 1na0_A Designed protein CTPR3; 96.7 0.006 2E-07 47.0 7.5 79 102-199 9-87 (125)
63 3k9i_A BH0479 protein; putativ 96.6 0.0045 1.6E-07 50.2 7.1 88 78-183 2-91 (117)
64 3fp2_A TPR repeat-containing p 96.6 0.0064 2.2E-07 59.7 9.1 104 74-199 251-354 (537)
65 3fp2_A TPR repeat-containing p 96.4 0.019 6.7E-07 56.3 11.3 110 71-183 281-408 (537)
66 1hh8_A P67PHOX, NCF-2, neutrop 96.4 0.039 1.3E-06 47.7 11.8 112 68-183 39-151 (213)
67 3urz_A Uncharacterized protein 96.4 0.015 5.1E-07 52.1 9.4 110 68-199 4-132 (208)
68 3vtx_A MAMA; tetratricopeptide 96.3 0.05 1.7E-06 46.2 11.7 96 70-186 77-172 (184)
69 1b89_A Protein (clathrin heavy 96.3 0.00062 2.1E-08 72.4 -0.3 101 70-179 36-148 (449)
70 1hxi_A PEX5, peroxisome target 96.3 0.021 7.2E-07 47.4 9.1 90 74-182 25-114 (121)
71 1a17_A Serine/threonine protei 96.2 0.027 9.2E-07 46.2 9.1 93 70-181 51-145 (166)
72 4i17_A Hypothetical protein; T 96.1 0.05 1.7E-06 48.0 11.4 94 75-188 16-109 (228)
73 2pl2_A Hypothetical conserved 96.1 0.041 1.4E-06 49.5 10.8 103 72-195 11-124 (217)
74 1b89_A Protein (clathrin heavy 96.1 0.0021 7.2E-08 68.4 2.4 37 155-198 150-186 (449)
75 2e2e_A Formate-dependent nitri 96.0 0.05 1.7E-06 46.3 10.4 95 70-183 48-145 (177)
76 4ga2_A E3 SUMO-protein ligase 96.0 0.033 1.1E-06 47.7 9.2 100 72-193 37-138 (150)
77 2pl2_A Hypothetical conserved 95.9 0.024 8.2E-07 51.1 8.2 86 74-179 126-211 (217)
78 2kat_A Uncharacterized protein 95.8 0.061 2.1E-06 42.9 9.6 81 83-182 2-82 (115)
79 2fbn_A 70 kDa peptidylprolyl i 95.8 0.12 4.1E-06 45.1 12.2 104 74-196 46-163 (198)
80 3rkv_A Putative peptidylprolyl 95.8 0.045 1.5E-06 46.3 9.1 96 74-188 19-130 (162)
81 3mv2_B Coatomer subunit epsilo 95.6 0.065 2.2E-06 54.3 11.0 119 71-192 105-258 (310)
82 3vtx_A MAMA; tetratricopeptide 95.5 0.11 3.8E-06 44.1 10.4 120 74-199 13-151 (184)
83 4gcn_A Protein STI-1; structur 95.4 0.056 1.9E-06 45.1 8.2 94 74-183 16-113 (127)
84 2c2l_A CHIP, carboxy terminus 95.4 0.092 3.1E-06 49.6 10.7 104 73-197 11-114 (281)
85 3gyz_A Chaperone protein IPGC; 95.4 0.034 1.2E-06 49.1 7.2 112 60-199 3-114 (151)
86 3u3w_A Transcriptional activat 95.4 0.16 5.5E-06 47.4 12.0 95 72-181 81-183 (293)
87 2ond_A Cleavage stimulation fa 95.3 0.086 3E-06 49.7 9.9 85 78-182 69-163 (308)
88 3ro2_A PINS homolog, G-protein 95.2 0.067 2.3E-06 47.8 8.6 98 74-182 13-112 (338)
89 1p5q_A FKBP52, FK506-binding p 95.2 0.12 4.1E-06 50.4 10.9 105 72-198 153-273 (336)
90 3ro2_A PINS homolog, G-protein 95.1 0.052 1.8E-06 48.4 7.6 98 73-181 230-331 (338)
91 4gyw_A UDP-N-acetylglucosamine 94.9 0.11 3.7E-06 57.5 10.8 106 73-200 50-156 (723)
92 2vsy_A XCC0866; transferase, g 94.9 0.22 7.5E-06 51.1 12.4 93 72-183 63-158 (568)
93 4i17_A Hypothetical protein; T 94.9 0.17 5.8E-06 44.6 10.0 106 72-196 48-160 (228)
94 2kck_A TPR repeat; tetratricop 94.8 0.16 5.4E-06 38.4 8.4 66 101-183 5-70 (112)
95 2ond_A Cleavage stimulation fa 94.7 0.28 9.7E-06 46.2 11.7 112 70-186 103-237 (308)
96 4abn_A Tetratricopeptide repea 94.5 0.11 3.9E-06 53.0 9.2 105 73-199 109-223 (474)
97 4ga2_A E3 SUMO-protein ligase 94.5 0.13 4.3E-06 44.0 8.1 99 78-197 9-107 (150)
98 3ro3_A PINS homolog, G-protein 94.5 0.19 6.5E-06 39.9 8.5 102 70-182 13-118 (164)
99 4a1s_A PINS, partner of inscut 94.4 0.11 3.9E-06 49.2 8.4 99 73-182 55-155 (411)
100 3mv2_B Coatomer subunit epsilo 94.4 0.15 5.2E-06 51.6 9.8 97 85-183 85-208 (310)
101 2lni_A Stress-induced-phosphop 94.4 0.21 7.1E-06 39.1 8.4 77 99-194 13-89 (133)
102 2e2e_A Formate-dependent nitri 94.3 0.046 1.6E-06 46.5 4.9 98 76-194 20-120 (177)
103 3sf4_A G-protein-signaling mod 94.3 0.15 5.2E-06 47.5 8.9 96 71-181 232-335 (406)
104 2vsy_A XCC0866; transferase, g 94.3 0.27 9.1E-06 50.5 11.4 97 70-185 27-123 (568)
105 4gyw_A UDP-N-acetylglucosamine 94.3 0.23 7.8E-06 54.9 11.7 106 71-199 14-121 (723)
106 3qky_A Outer membrane assembly 94.3 0.33 1.1E-05 44.0 10.7 97 74-187 23-129 (261)
107 3ro3_A PINS homolog, G-protein 94.2 0.27 9.4E-06 38.9 8.9 101 70-181 53-157 (164)
108 3sf4_A G-protein-signaling mod 94.1 0.14 4.8E-06 47.8 8.1 101 71-182 192-296 (406)
109 3n71_A Histone lysine methyltr 94.0 0.21 7.1E-06 52.9 10.2 97 74-180 317-420 (490)
110 2vyi_A SGTA protein; chaperone 94.0 0.25 8.4E-06 38.1 8.0 81 70-169 50-130 (131)
111 1elr_A TPR2A-domain of HOP; HO 94.0 0.32 1.1E-05 37.6 8.7 65 102-183 4-68 (131)
112 1wao_1 Serine/threonine protei 94.0 0.24 8.1E-06 51.2 10.2 99 76-195 16-114 (477)
113 3qww_A SET and MYND domain-con 93.9 0.19 6.5E-06 52.4 9.6 94 78-181 310-410 (433)
114 2l6j_A TPR repeat-containing p 93.9 0.29 9.8E-06 37.6 8.3 64 101-181 3-66 (111)
115 4a1s_A PINS, partner of inscut 93.9 0.18 6E-06 48.0 8.5 100 71-181 268-371 (411)
116 4abn_A Tetratricopeptide repea 93.9 0.16 5.4E-06 51.9 8.7 108 70-199 141-268 (474)
117 3gw4_A Uncharacterized protein 93.8 0.27 9.1E-06 41.7 8.6 93 77-182 3-95 (203)
118 3qwp_A SET and MYND domain-con 93.8 0.25 8.4E-06 51.2 10.0 99 73-181 294-399 (429)
119 3gw4_A Uncharacterized protein 93.8 0.25 8.6E-06 41.9 8.4 98 70-182 30-136 (203)
120 2l6j_A TPR repeat-containing p 93.7 0.029 1E-06 43.3 2.3 57 73-131 11-67 (111)
121 2qfc_A PLCR protein; TPR, HTH, 93.6 0.92 3.1E-05 42.2 12.7 93 75-182 124-225 (293)
122 1qqe_A Vesicular transport pro 93.6 0.44 1.5E-05 44.8 10.5 96 74-186 125-230 (292)
123 1elw_A TPR1-domain of HOP; HOP 93.6 0.4 1.4E-05 36.3 8.5 76 101-195 3-78 (118)
124 3ma5_A Tetratricopeptide repea 93.6 0.39 1.3E-05 38.2 8.7 64 101-181 6-69 (100)
125 1na3_A Designed protein CTPR2; 93.5 0.44 1.5E-05 35.3 8.5 68 102-188 9-76 (91)
126 1kt0_A FKBP51, 51 kDa FK506-bi 93.4 0.49 1.7E-05 48.3 11.4 107 74-199 276-395 (457)
127 1p5q_A FKBP52, FK506-binding p 93.4 0.34 1.2E-05 47.1 9.8 92 71-181 201-293 (336)
128 2yhc_A BAMD, UPF0169 lipoprote 93.4 0.61 2.1E-05 41.8 10.7 98 74-189 12-130 (225)
129 2yhc_A BAMD, UPF0169 lipoprote 93.1 0.5 1.7E-05 42.4 9.7 88 78-186 108-217 (225)
130 2if4_A ATFKBP42; FKBP-like, al 93.1 0.36 1.2E-05 47.2 9.4 102 74-197 187-306 (338)
131 1qqe_A Vesicular transport pro 92.9 0.35 1.2E-05 45.4 8.7 98 73-185 84-190 (292)
132 3u3w_A Transcriptional activat 92.9 0.88 3E-05 42.4 11.3 97 74-181 123-224 (293)
133 2h6f_A Protein farnesyltransfe 92.8 0.46 1.6E-05 48.1 10.1 115 72-192 103-237 (382)
134 2r5s_A Uncharacterized protein 92.7 0.33 1.1E-05 41.8 7.7 120 74-197 14-152 (176)
135 2vgx_A Chaperone SYCD; alterna 92.7 0.17 6E-06 43.3 5.8 80 101-199 20-99 (148)
136 3qky_A Outer membrane assembly 92.6 0.89 3E-05 41.1 10.7 95 72-183 58-178 (261)
137 3urz_A Uncharacterized protein 92.6 1.2 4E-05 39.7 11.3 112 69-186 57-188 (208)
138 3qou_A Protein YBBN; thioredox 92.5 0.57 2E-05 44.2 9.7 121 73-197 124-263 (287)
139 2dba_A Smooth muscle cell asso 92.5 0.71 2.4E-05 36.8 8.9 73 101-193 27-103 (148)
140 2h6f_A Protein farnesyltransfe 92.5 0.65 2.2E-05 47.0 10.6 30 102-131 97-126 (382)
141 1na3_A Designed protein CTPR2; 92.5 1.1 3.7E-05 33.1 9.3 58 72-131 15-72 (91)
142 2xcb_A PCRH, regulatory protei 92.4 0.42 1.4E-05 39.7 7.7 80 101-199 17-96 (142)
143 2ooe_A Cleavage stimulation fa 92.3 0.61 2.1E-05 47.3 10.2 84 79-182 292-385 (530)
144 1ihg_A Cyclophilin 40; ppiase 92.3 0.52 1.8E-05 47.1 9.5 97 74-189 231-341 (370)
145 2ooe_A Cleavage stimulation fa 92.1 0.62 2.1E-05 47.2 10.0 61 68-131 323-385 (530)
146 3q49_B STIP1 homology and U bo 92.1 0.94 3.2E-05 36.1 9.1 80 100-198 7-86 (137)
147 1ouv_A Conserved hypothetical 92.0 2.3 7.9E-05 38.4 12.7 82 79-183 55-144 (273)
148 2qfc_A PLCR protein; TPR, HTH, 91.9 1.7 5.7E-05 40.5 11.9 97 71-180 80-182 (293)
149 1ouv_A Conserved hypothetical 91.9 2.1 7.4E-05 38.6 12.3 87 74-183 14-108 (273)
150 2r5s_A Uncharacterized protein 91.7 0.95 3.3E-05 38.8 9.3 80 84-181 92-172 (176)
151 3sz7_A HSC70 cochaperone (SGT) 91.2 0.87 3E-05 38.4 8.4 80 100-198 9-88 (164)
152 3upv_A Heat shock protein STI1 90.9 1.2 3.9E-05 35.7 8.5 75 102-195 4-78 (126)
153 2hr2_A Hypothetical protein; a 90.8 1.2 4.1E-05 41.1 9.5 94 74-181 19-130 (159)
154 2fbn_A 70 kDa peptidylprolyl i 90.7 0.68 2.3E-05 40.3 7.4 94 72-184 94-188 (198)
155 2pzi_A Probable serine/threoni 90.6 1.5 5.1E-05 47.2 11.5 100 71-192 397-504 (681)
156 3ulq_A Response regulator aspa 90.5 1.4 4.7E-05 42.3 10.0 96 72-182 190-293 (383)
157 4gco_A Protein STI-1; structur 90.4 0.96 3.3E-05 37.7 7.8 78 103-199 14-91 (126)
158 3n71_A Histone lysine methyltr 90.3 0.83 2.8E-05 48.4 9.1 98 70-182 355-464 (490)
159 1hz4_A MALT regulatory protein 90.1 1.8 6.3E-05 40.8 10.5 98 72-182 99-203 (373)
160 3k9i_A BH0479 protein; putativ 90.1 0.89 3E-05 36.5 7.1 61 70-132 31-91 (117)
161 2kc7_A BFR218_protein; tetratr 89.6 0.73 2.5E-05 35.3 6.1 57 74-132 8-65 (99)
162 4gcn_A Protein STI-1; structur 89.1 2 7E-05 35.5 8.8 63 103-182 9-71 (127)
163 2kc7_A BFR218_protein; tetratr 89.0 1.6 5.4E-05 33.4 7.5 65 108-191 6-71 (99)
164 2ifu_A Gamma-SNAP; membrane fu 88.7 1.4 4.9E-05 41.6 8.5 96 75-186 125-225 (307)
165 3ulq_A Response regulator aspa 88.2 2.6 8.9E-05 40.3 10.1 97 76-182 113-213 (383)
166 3q15_A PSP28, response regulat 88.1 2.1 7.2E-05 41.1 9.4 98 71-184 187-292 (378)
167 4f3v_A ESX-1 secretion system 87.8 1.7 5.9E-05 43.4 8.8 63 105-183 174-238 (282)
168 2ff4_A Probable regulatory pro 87.7 6.2 0.00021 40.0 13.1 106 66-188 108-245 (388)
169 2ifu_A Gamma-SNAP; membrane fu 87.6 1.6 5.6E-05 41.2 8.2 97 73-181 83-183 (307)
170 3qou_A Protein YBBN; thioredox 87.3 0.95 3.2E-05 42.7 6.4 95 71-180 156-282 (287)
171 1wao_1 Serine/threonine protei 87.3 1 3.4E-05 46.5 7.0 89 70-177 44-134 (477)
172 3q15_A PSP28, response regulat 87.2 3.1 0.00011 39.9 10.0 96 76-181 111-210 (378)
173 1hz4_A MALT regulatory protein 86.9 5 0.00017 37.8 11.1 96 75-182 23-122 (373)
174 2xev_A YBGF; tetratricopeptide 86.7 2.8 9.6E-05 32.9 7.9 61 105-183 5-69 (129)
175 4f3v_A ESX-1 secretion system 84.9 2.5 8.7E-05 42.1 8.3 97 70-186 106-204 (282)
176 2kat_A Uncharacterized protein 84.6 2.6 8.9E-05 33.2 6.8 60 70-131 23-82 (115)
177 3ma5_A Tetratricopeptide repea 83.4 3 0.0001 32.9 6.6 58 71-130 12-69 (100)
178 2pzi_A Probable serine/threoni 83.2 2.3 7.9E-05 45.7 7.7 115 73-194 440-573 (681)
179 2c2l_A CHIP, carboxy terminus 82.7 3.8 0.00013 38.5 8.1 78 101-198 3-81 (281)
180 2ff4_A Probable regulatory pro 81.9 2.8 9.5E-05 42.6 7.3 65 71-137 176-245 (388)
181 1kt0_A FKBP51, 51 kDa FK506-bi 80.8 4.3 0.00015 41.3 8.3 93 71-182 322-415 (457)
182 1hxi_A PEX5, peroxisome target 80.0 8.1 0.00028 31.6 8.3 77 104-199 19-95 (121)
183 2v5f_A Prolyl 4-hydroxylase su 79.3 9.2 0.00031 30.9 8.3 78 100-189 3-80 (104)
184 4g1t_A Interferon-induced prot 77.6 9.6 0.00033 36.9 9.3 105 78-186 225-367 (472)
185 2if4_A ATFKBP42; FKBP-like, al 77.0 3 0.0001 40.7 5.5 91 72-182 236-328 (338)
186 4b4t_Q 26S proteasome regulato 76.6 6 0.0002 37.8 7.4 57 74-130 12-83 (434)
187 3rjv_A Putative SEL1 repeat pr 76.4 11 0.00038 33.6 8.7 87 75-185 27-121 (212)
188 1ihg_A Cyclophilin 40; ppiase 75.7 15 0.00051 36.6 10.3 81 74-174 281-362 (370)
189 4g1t_A Interferon-induced prot 74.1 20 0.00069 34.6 10.4 73 100-181 49-122 (472)
190 2v5f_A Prolyl 4-hydroxylase su 72.5 8.7 0.0003 31.0 6.4 59 73-131 12-75 (104)
191 2xm6_A Protein corresponding t 71.3 33 0.0011 34.2 11.6 83 78-183 55-145 (490)
192 1xi4_A Clathrin heavy chain; a 69.5 11 0.00038 46.1 8.8 108 72-192 1201-1317(1630)
193 1klx_A Cysteine rich protein B 69.4 50 0.0017 27.7 11.0 87 77-186 36-130 (138)
194 2xm6_A Protein corresponding t 68.9 38 0.0013 33.8 11.4 91 70-183 119-217 (490)
195 3mkq_A Coatomer beta'-subunit; 67.4 31 0.0011 36.0 10.8 94 76-179 662-762 (814)
196 3rkv_A Putative peptidylprolyl 65.4 15 0.0005 30.7 6.5 85 103-195 12-103 (162)
197 3qww_A SET and MYND domain-con 64.4 12 0.00039 39.1 6.9 60 71-130 345-410 (433)
198 3rjv_A Putative SEL1 repeat pr 63.4 57 0.0019 28.9 10.4 83 81-182 68-158 (212)
199 1xi4_A Clathrin heavy chain; a 62.7 20 0.00067 44.0 9.2 109 74-199 1113-1231(1630)
200 1zu2_A Mitochondrial import re 62.0 13 0.00046 34.1 6.1 90 76-187 12-123 (158)
201 2avr_X Adhesion A; antiparalle 60.9 69 0.0024 28.9 10.3 78 422-499 11-104 (119)
202 1klx_A Cysteine rich protein B 58.4 16 0.00056 30.7 5.6 85 77-186 6-94 (138)
203 4b4t_Q 26S proteasome regulato 57.9 38 0.0013 32.2 8.7 99 70-181 139-244 (434)
204 3qwp_A SET and MYND domain-con 55.1 20 0.0007 36.9 6.7 61 70-130 333-399 (429)
205 2hr2_A Hypothetical protein; a 51.7 32 0.0011 31.6 6.8 83 104-192 13-101 (159)
206 1pc2_A Mitochondria fission pr 51.4 61 0.0021 29.7 8.6 85 84-187 16-103 (152)
207 3ly7_A Transcriptional activat 50.5 57 0.0019 34.0 9.2 68 99-186 274-341 (372)
208 2nsz_A Programmed cell death p 50.3 48 0.0016 29.1 7.5 62 70-133 11-74 (129)
209 4e6h_A MRNA 3'-END-processing 49.6 37 0.0013 37.5 8.0 89 77-184 445-535 (679)
210 4dnd_A Syntaxin-10, SYN10; str 49.4 49 0.0017 29.7 7.5 74 482-555 36-124 (130)
211 3u64_A Protein TP_0956; tetrat 49.1 54 0.0019 33.5 8.6 86 82-185 179-272 (301)
212 1wy6_A Hypothetical protein ST 46.9 71 0.0024 30.3 8.3 63 70-134 95-157 (172)
213 3bee_A Putative YFRE protein; 46.1 1.2E+02 0.0039 24.5 9.0 47 82-131 25-72 (93)
214 3dra_A Protein farnesyltransfe 46.0 43 0.0015 33.2 7.2 31 151-181 256-286 (306)
215 3edv_A Spectrin beta chain, br 44.8 1.1E+02 0.0038 29.2 9.7 72 417-495 37-111 (323)
216 2dfs_A Myosin-5A; myosin-V, in 44.7 2.2E+02 0.0076 33.4 13.8 19 524-542 1034-1053(1080)
217 2wam_A RV2714, conserved hypot 44.2 27 0.00092 36.2 5.6 33 270-302 146-178 (351)
218 3bee_A Putative YFRE protein; 44.0 1.3E+02 0.0043 24.3 9.1 37 74-113 51-87 (93)
219 2chq_A Replication factor C sm 41.9 1.7E+02 0.0059 27.1 10.3 98 81-186 162-261 (319)
220 3etw_A Adhesin A; antiparallel 40.5 1.9E+02 0.0063 26.1 9.7 83 420-502 9-107 (119)
221 2nsz_A Programmed cell death p 40.1 43 0.0015 29.4 5.5 65 105-186 10-76 (129)
222 2ion_A PDCD4, programmed cell 39.5 52 0.0018 29.9 6.1 62 70-133 13-76 (152)
223 3mkq_B Coatomer subunit alpha; 38.8 1.3E+02 0.0044 28.3 8.9 92 78-178 17-114 (177)
224 3e4b_A ALGK; tetratricopeptide 36.9 1.1E+02 0.0039 30.7 8.8 30 104-133 178-210 (452)
225 4e6h_A MRNA 3'-END-processing 35.8 69 0.0024 35.3 7.5 98 68-183 473-571 (679)
226 2uy1_A Cleavage stimulation fa 35.4 1E+02 0.0035 32.0 8.4 83 78-179 298-380 (493)
227 3mkq_A Coatomer beta'-subunit; 34.8 1.1E+02 0.0037 31.9 8.4 77 70-181 633-709 (814)
228 2xzr_A Immunoglobulin-binding 34.2 1.9E+02 0.0065 25.6 8.4 42 453-494 1-44 (114)
229 3e4b_A ALGK; tetratricopeptide 34.2 1.7E+02 0.0057 29.5 9.5 42 83-128 126-167 (452)
230 3ghg_A Fibrinogen alpha chain; 31.1 1.2E+02 0.004 33.6 8.1 9 432-440 62-70 (562)
231 3c3g_A Alpha/beta peptide with 30.8 21 0.00071 25.8 1.5 11 452-462 1-11 (33)
232 3ghg_A Fibrinogen alpha chain; 30.8 1.8E+02 0.006 32.2 9.3 16 520-535 176-191 (562)
233 2ion_A PDCD4, programmed cell 30.3 73 0.0025 28.9 5.5 65 105-186 12-78 (152)
234 2wq1_A General control protein 30.2 21 0.00074 25.8 1.5 11 452-462 1-11 (33)
235 2p58_C Putative type III secre 29.3 1.7E+02 0.0056 26.4 7.3 51 112-184 50-100 (116)
236 1dce_A Protein (RAB geranylger 28.6 1.5E+02 0.0053 31.4 8.5 96 77-193 118-230 (567)
237 3c3f_A Alpha/beta peptide with 28.6 24 0.00081 25.7 1.5 11 452-462 2-12 (34)
238 3swy_A Cyclic nucleotide-gated 28.2 1.7E+02 0.0059 22.3 6.3 39 422-460 7-46 (46)
239 2l2l_B Methyl-CPG-binding doma 27.5 30 0.001 25.5 1.9 24 465-488 9-32 (36)
240 2r2v_A GCN4 leucine zipper; co 27.3 26 0.00088 25.5 1.5 12 452-463 2-13 (34)
241 2bni_A General control protein 27.0 27 0.00091 25.4 1.6 11 452-462 2-12 (34)
242 3hhm_B NISH2 P85alpha; PI3KCA, 26.3 2.5E+02 0.0087 29.1 9.4 41 518-558 203-244 (373)
243 2epl_X N-acetyl-beta-D-glucosa 25.9 78 0.0027 35.0 5.8 89 406-494 486-589 (627)
244 2jul_A Calsenilin; EF-hand, ca 25.7 2.2E+02 0.0074 26.3 8.0 28 152-179 228-255 (256)
245 2p90_A Hypothetical protein CG 25.3 61 0.0021 32.8 4.5 33 274-306 110-143 (319)
246 1k1a_A B-cell lymphoma 3-encod 24.3 1.9E+02 0.0064 25.2 7.0 62 70-136 10-73 (241)
247 2uy1_A Cleavage stimulation fa 23.8 2.1E+02 0.0071 29.7 8.3 91 67-181 322-412 (493)
248 2oxj_A Hybrid alpha/beta pepti 23.4 34 0.0012 24.9 1.5 11 452-462 2-12 (34)
249 1gqe_A Release factor 2, RF2; 23.3 3.8E+02 0.013 28.1 9.9 53 429-485 11-66 (365)
250 3e35_A Uncharacterized protein 23.2 79 0.0027 32.4 4.8 26 278-303 117-142 (325)
251 2y69_E Cytochrome C oxidase su 23.0 4.7E+02 0.016 24.5 9.4 72 59-131 45-117 (152)
252 1deq_A Fibrinogen (alpha chain 22.6 1.8E+02 0.0061 30.9 7.4 20 423-442 63-82 (390)
253 3ygs_P Procaspase 9; apoptosis 22.6 1.7E+02 0.0058 24.3 6.0 53 67-124 35-90 (97)
254 2d5k_A DPS, DPS family protein 21.6 1.8E+02 0.006 25.6 6.3 39 407-446 82-120 (156)
255 3m48_A General control protein 21.5 40 0.0014 24.4 1.6 11 452-462 1-11 (33)
256 3twr_A Tankyrase-2; ankyrin re 21.4 1.9E+02 0.0066 23.9 6.2 91 70-186 9-101 (165)
257 1a1d_A RNA polymerase; RPB8, O 21.3 64 0.0022 30.0 3.4 35 290-326 47-81 (146)
258 2hy6_A General control protein 21.2 41 0.0014 24.5 1.6 11 452-462 2-12 (34)
259 3eiq_C Programmed cell death p 21.2 2E+02 0.0069 29.7 7.4 62 70-133 221-284 (358)
260 1fxk_A Prefoldin; archaeal pro 21.1 3.4E+02 0.012 22.2 8.6 78 423-533 4-85 (107)
261 1jr3_A DNA polymerase III subu 20.9 4.7E+02 0.016 24.8 9.6 99 81-186 179-278 (373)
262 2d2s_A Exocyst complex compone 20.7 3E+02 0.01 26.5 8.2 113 64-196 14-142 (235)
263 2uwj_G Type III export protein 20.7 4.3E+02 0.015 23.7 8.3 70 106-184 26-99 (115)
264 3swf_A CGMP-gated cation chann 20.4 2.3E+02 0.0078 23.7 6.1 50 417-466 4-54 (74)
265 1uo4_A General control protein 20.1 46 0.0016 24.2 1.6 12 451-462 1-12 (34)
No 1
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=99.92 E-value=4.8e-26 Score=238.65 Aligned_cols=152 Identities=13% Similarity=0.043 Sum_probs=131.6
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCC---------hhHHHHHHHHHHhcCCCCCCCcc
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGN---------TDLALSIFYAMRSSFDQGLSENG 140 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGr---------VDeAlsLF~EM~srG~~PdvvTY 140 (566)
+.+|++|||.|++++|+++|++|.+ .|..||++|||+||++||+.|. +++|+++|++|...|+.||.+||
T Consensus 30 ~~~id~c~k~G~~~~A~~lf~~M~~-~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~ty 108 (501)
T 4g26_A 30 KQKLDMCSKKGDVLEALRLYDEARR-NGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATF 108 (501)
T ss_dssp HHHHHHTTTSCCHHHHHHHHHHHHH-HTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHH-cCCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHHH
Confidence 5679999999999999999999997 5789999999999999998776 68899999999999999999999
Q ss_pred -cccccc------------------ccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceeccch-
Q 047498 141 -TLVDRW------------------KWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVRCPT- 200 (566)
Q Consensus 141 -aLi~~~------------------rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~C~t- 200 (566)
+++.++ ..+.||++|||+||+|||+.|++++|.++|++|.+.|+.| |++|||+||+++.
T Consensus 109 n~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~P-d~~ty~~Li~~~~~ 187 (501)
T 4g26_A 109 TNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVP-EEPELAALLKVSMD 187 (501)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCC-CHHHHHHHHHHHhh
Confidence 666654 1158999999999999999999999999999999999999 8999999999764
Q ss_pred ---hhHHHHhhcccC--cce-------eeeccccc
Q 047498 201 ---CLIAVAVAQPQH--GIQ-------IVSCAKCR 223 (566)
Q Consensus 201 ---C~~A~aV~Qpq~--Giq-------lV~c~~cR 223 (566)
.++|.++++.++ |++ ++.+.+|+
T Consensus 188 ~g~~d~A~~ll~~Mr~~g~~ps~~T~~~l~~~F~s 222 (501)
T 4g26_A 188 TKNADKVYKTLQRLRDLVRQVSKSTFDMIEEWFKS 222 (501)
T ss_dssp TTCHHHHHHHHHHHHHHTSSBCHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHhc
Confidence 238888888554 554 25555554
No 2
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=99.92 E-value=1.8e-25 Score=254.43 Aligned_cols=113 Identities=10% Similarity=0.122 Sum_probs=105.9
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhc--CCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccc
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKR--SGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWK 147 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er--~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~r 147 (566)
|+||+||||+|++++|.++|++|.+. .|..||++|||+||+||||.|++++|+++|++|.+.|+
T Consensus 131 naLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~-------------- 196 (1134)
T 3spa_A 131 LAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGL-------------- 196 (1134)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTC--------------
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCC--------------
Confidence 89999999999999999999988631 36789999999999999999999999999999999999
Q ss_pred cCCCChHhHHHHHHHHHhcCCH-HHHHHHHHHHHhCCCCCCCcccccceeccc
Q 047498 148 WSRPDVSVYTSLVQSLAASLKV-SDALRLIDDISRVGVSPGEEVPFGKVVRCP 199 (566)
Q Consensus 148 w~~PDVVTYNTLIdGLCKsGRV-dEAlkLLeEM~~rGcsPdDvVTYntLI~C~ 199 (566)
.||++|||+||+||||.|+. ++|.++|++|.++||.| |+||||+++++.
T Consensus 197 --~PDvvTYntLI~glcK~G~~~e~A~~Ll~EM~~kG~~P-D~vtY~~ll~~~ 246 (1134)
T 3spa_A 197 --TPDLLSYAAALQCMGRQDQDAGTIERCLEQMSQEGLKL-QALFTAVLLSEE 246 (1134)
T ss_dssp --CCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHTCCS-HHHHHHSCCCHH
T ss_pred --CCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCCC-ChhhcccccChh
Confidence 59999999999999999995 78999999999999999 899999999853
No 3
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=99.87 E-value=1.4e-22 Score=212.41 Aligned_cols=112 Identities=10% Similarity=0.065 Sum_probs=108.1
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWS 149 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~ 149 (566)
|+||++||++|++++|+++|++|.+ .|..||++|||+||+|||+.|++++|.++|++|.+.|+
T Consensus 109 n~lI~~~~~~g~~~~A~~l~~~M~~-~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~---------------- 171 (501)
T 4g26_A 109 TNGARLAVAKDDPEMAFDMVKQMKA-FGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEV---------------- 171 (501)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC----------------
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHH-cCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCC----------------
Confidence 7999999999999999999999996 57899999999999999999999999999999999999
Q ss_pred CCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceeccc
Q 047498 150 RPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVRCP 199 (566)
Q Consensus 150 ~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~C~ 199 (566)
.||.+|||+||++|||.|++++|.++|++|.+.|+.| +..||++|++.+
T Consensus 172 ~Pd~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~p-s~~T~~~l~~~F 220 (501)
T 4g26_A 172 VPEEPELAALLKVSMDTKNADKVYKTLQRLRDLVRQV-SKSTFDMIEEWF 220 (501)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSB-CHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCc-CHHHHHHHHHHH
Confidence 5999999999999999999999999999999999999 899999999865
No 4
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=99.79 E-value=3.6e-20 Score=211.34 Aligned_cols=97 Identities=9% Similarity=0.190 Sum_probs=85.3
Q ss_pred ChhhhHHHHHHHHhcCChhHHHHHHHHHHh---cCCCCCCCccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHH
Q 047498 101 TVDECCLIINAAIDRGNTDLALSIFYAMRS---SFDQGLSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLID 177 (566)
Q Consensus 101 DvvTYNsLI~GlCKaGrVDeAlsLF~EM~s---rG~~PdvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLe 177 (566)
-.+|||+||+||||.|++++|+++|++|.+ +|+ .||++|||+||+||||.|++++|+++|+
T Consensus 126 ~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~----------------~PdvvTYNtLI~Glck~G~~~eA~~Lf~ 189 (1134)
T 3spa_A 126 QQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRK----------------LLTLDMYNAVMLGWARQGAFKELVYVLF 189 (1134)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHT----------------TCCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCC----------------CCCHhHHHHHHHHHHhCCCHHHHHHHHH
Confidence 346899999999999999999999998874 477 5999999999999999999999999999
Q ss_pred HHHhCCCCCCCcccccceeccchhh------HHHHhhcc--cCcce
Q 047498 178 DISRVGVSPGEEVPFGKVVRCPTCL------IAVAVAQP--QHGIQ 215 (566)
Q Consensus 178 EM~~rGcsPdDvVTYntLI~C~tC~------~A~aV~Qp--q~Giq 215 (566)
+|.++||.| |+||||+||+|+ |+ +|..+++. .+|+.
T Consensus 190 eM~~~G~~P-DvvTYntLI~gl-cK~G~~~e~A~~Ll~EM~~kG~~ 233 (1134)
T 3spa_A 190 MVKDAGLTP-DLLSYAAALQCM-GRQDQDAGTIERCLEQMSQEGLK 233 (1134)
T ss_dssp HHHHTTCCC-CHHHHHHHHHHH-HHHTCCHHHHHHHHHHHHHHTCC
T ss_pred HHHHcCCCC-cHHHHHHHHHHH-HhCCCcHHHHHHHHHHHHHcCCC
Confidence 999999999 899999999987 53 45667663 34664
No 5
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.96 E-value=1.9e-09 Score=107.98 Aligned_cols=139 Identities=11% Similarity=-0.036 Sum_probs=102.9
Q ss_pred hhHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCcc-cccccc
Q 047498 68 VEEELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENG-TLVDRW 146 (566)
Q Consensus 68 ~~~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTY-aLi~~~ 146 (566)
.-+.+.+.+++.|++++|.++|+++.+. ..-+..+|+.++.+|++.|+.++|+++|++|...+. .+..+| .+...+
T Consensus 375 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~--~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~-~~~~~~~~l~~~~ 451 (597)
T 2xpi_A 375 TWLAVGIYYLCVNKISEARRYFSKSSTM--DPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQ-GTHLPYLFLGMQH 451 (597)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTT-TCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc-cchHHHHHHHHHH
Confidence 4467889999999999999999999742 223677899999999999999999999999987643 233333 221111
Q ss_pred -----------------ccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC----CCCCCC-cccccceeccch----
Q 047498 147 -----------------KWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRV----GVSPGE-EVPFGKVVRCPT---- 200 (566)
Q Consensus 147 -----------------rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r----GcsPdD-vVTYntLI~C~t---- 200 (566)
.....|..+|+.+++.|++.|++++|+++|++|.+. |..|++ ..+|+.+..++.
T Consensus 452 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~ 531 (597)
T 2xpi_A 452 MQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKM 531 (597)
T ss_dssp HHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTC
T ss_pred HHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcC
Confidence 112357889999999999999999999999999887 888843 678888887653
Q ss_pred hhHHHHhhc
Q 047498 201 CLIAVAVAQ 209 (566)
Q Consensus 201 C~~A~aV~Q 209 (566)
.++|..+++
T Consensus 532 ~~~A~~~~~ 540 (597)
T 2xpi_A 532 YDAAIDALN 540 (597)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 125655544
No 6
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.91 E-value=3.3e-09 Score=106.18 Aligned_cols=131 Identities=10% Similarity=-0.036 Sum_probs=72.4
Q ss_pred HHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCcc-cccccc-----
Q 047498 73 LSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENG-TLVDRW----- 146 (566)
Q Consensus 73 IrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTY-aLi~~~----- 146 (566)
++.|++.|++++|.++|++|.+. .+|..+|+.++.+|++.|+.++|+++|++|...+.. +..++ .+..++
T Consensus 279 ~~~~~~~g~~~~A~~~~~~~~~~---~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~ 354 (597)
T 2xpi_A 279 LNKTSHEDELRRAEDYLSSINGL---EKSSDLLLCKADTLFVRSRFIDVLAITTKILEIDPY-NLDVYPLHLASLHESGE 354 (597)
T ss_dssp SCTTTTHHHHHHHHHHHHTSTTG---GGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CCTTHHHHHHHHHHHTC
T ss_pred HHHHcCcchHHHHHHHHHHhhcC---CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHcCcc-cHHHHHHHHHHHHHhCC
Confidence 44555555555555555555421 245555555555555555555555555555543321 11111 100000
Q ss_pred ------------ccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceeccch----hhHHHHhhc
Q 047498 147 ------------KWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVRCPT----CLIAVAVAQ 209 (566)
Q Consensus 147 ------------rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~C~t----C~~A~aV~Q 209 (566)
+....|+.+|+.|++.|++.|++++|+++|++|.+ ..|++..+|+.+++++. .++|..+++
T Consensus 355 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~--~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 431 (597)
T 2xpi_A 355 KNKLYLISNDLVDRHPEKAVTWLAVGIYYLCVNKISEARRYFSKSST--MDPQFGPAWIGFAHSFAIEGEHDQAISAYT 431 (597)
T ss_dssp HHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HCTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 00124677888888888888888888888888876 35656777887777653 125555544
No 7
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.26 E-value=4.3e-06 Score=79.78 Aligned_cols=109 Identities=12% Similarity=0.078 Sum_probs=74.4
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWS 149 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~ 149 (566)
..+...+++.|++++|.+.|+++.+. ..-+..+|+.+...+++.|+.++|.+.|+++....
T Consensus 241 ~~l~~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~----------------- 301 (388)
T 1w3b_A 241 GNLACVYYEQGLIDLAIDTYRRAIEL--QPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC----------------- 301 (388)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHT--CSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHC-----------------
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhh--CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-----------------
Confidence 35556677777777777777777642 11234567777777777777777777777776542
Q ss_pred CCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceeccc
Q 047498 150 RPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVRCP 199 (566)
Q Consensus 150 ~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~C~ 199 (566)
..|..+|+.+...+++.|++++|+++|+++.+. .|++..+|..+..++
T Consensus 302 p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~l~~~~ 349 (388)
T 1w3b_A 302 PTHADSLNNLANIKREQGNIEEAVRLYRKALEV--FPEFAAAHSNLASVL 349 (388)
T ss_dssp TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTS--CTTCHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--CCCcHHHHHHHHHHH
Confidence 256778888888888888888888888888763 565666666666554
No 8
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.13 E-value=7.6e-06 Score=78.06 Aligned_cols=99 Identities=16% Similarity=0.159 Sum_probs=85.8
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWS 149 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~ 149 (566)
..+...+++.|++++|.+.|+++.+. ...+..+|+.+...+++.|+.++|+++|+++....
T Consensus 275 ~~l~~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~----------------- 335 (388)
T 1w3b_A 275 CNLANALKEKGSVAEAEDCYNTALRL--CPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF----------------- 335 (388)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSC-----------------
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhh--CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-----------------
Confidence 56778899999999999999999853 34578899999999999999999999999997542
Q ss_pred CCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCc
Q 047498 150 RPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEE 189 (566)
Q Consensus 150 ~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDv 189 (566)
..+..+|+.|...|++.|+.++|++.|+++.+ ..|++.
T Consensus 336 p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~--~~p~~~ 373 (388)
T 1w3b_A 336 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIR--ISPTFA 373 (388)
T ss_dssp TTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHT--TCTTCH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hCCCCH
Confidence 24678999999999999999999999999987 578543
No 9
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.07 E-value=3.8e-05 Score=59.69 Aligned_cols=106 Identities=11% Similarity=0.075 Sum_probs=78.5
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCC
Q 047498 71 ELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSR 150 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~ 150 (566)
.+...+.+.|++++|.++|.++.+. ...+...|+.+...+.+.|+.++|.++|+++...+.
T Consensus 6 ~l~~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~----------------- 66 (136)
T 2fo7_A 6 NLGNAYYKQGDYDEAIEYYQKALEL--DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP----------------- 66 (136)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT-----------------
T ss_pred HHHHHHHHcCcHHHHHHHHHHHHHc--CCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCC-----------------
Confidence 4556677889999999999988742 223566788888889999999999999998876542
Q ss_pred CChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceec
Q 047498 151 PDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVR 197 (566)
Q Consensus 151 PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~ 197 (566)
.+...|..+...+++.|+.++|++.|+++.+.. |++...|..+..
T Consensus 67 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~la~ 111 (136)
T 2fo7_A 67 RSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD--PRSAEAWYNLGN 111 (136)
T ss_dssp TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--CCChHHHHHHHH
Confidence 456778888888888899999999988888753 433334433333
No 10
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.07 E-value=4.1e-05 Score=59.49 Aligned_cols=95 Identities=12% Similarity=0.059 Sum_probs=80.3
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWS 149 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~ 149 (566)
..+...+...|+.++|.+.|.++... ...+...|..+...+++.|+.++|.++|+++.....
T Consensus 39 ~~~a~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~---------------- 100 (136)
T 2fo7_A 39 YNLGNAYYKQGDYDEAIEYYQKALEL--DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP---------------- 100 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT----------------
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHH--CCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC----------------
Confidence 44566778899999999999999752 223567789999999999999999999999987642
Q ss_pred CCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCC
Q 047498 150 RPDVSVYTSLVQSLAASLKVSDALRLIDDISRVG 183 (566)
Q Consensus 150 ~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rG 183 (566)
.+..+|..+...+++.|+.++|.+.|+++....
T Consensus 101 -~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 133 (136)
T 2fo7_A 101 -RSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD 133 (136)
T ss_dssp -TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHS
T ss_pred -CChHHHHHHHHHHHHHccHHHHHHHHHHHHccC
Confidence 467889999999999999999999999998753
No 11
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.04 E-value=6.6e-05 Score=58.16 Aligned_cols=94 Identities=12% Similarity=0.060 Sum_probs=80.7
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWS 149 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~ 149 (566)
..+...+.+.|++++|.++|.++.... ..+...|+.+...+.+.|+.++|+.+|+++.....
T Consensus 13 ~~~~~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~---------------- 74 (125)
T 1na0_A 13 YNLGNAYYKQGDYDEAIEYYQKALELD--PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP---------------- 74 (125)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT----------------
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHC--cCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCC----------------
Confidence 345667889999999999999997532 23567889999999999999999999999987642
Q ss_pred CCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 150 RPDVSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 150 ~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
.+..+|..+...+.+.|+.++|.+.|+++.+.
T Consensus 75 -~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 106 (125)
T 1na0_A 75 -NNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 106 (125)
T ss_dssp -TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 46788999999999999999999999999875
No 12
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=97.90 E-value=8e-05 Score=63.82 Aligned_cols=97 Identities=10% Similarity=-0.017 Sum_probs=53.8
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCC
Q 047498 71 ELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSR 150 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~ 150 (566)
.+...+.+.|++++|.+.|++..+. ..-+...|..+...+.+.|+.++|+++|+++.....
T Consensus 13 ~~~~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~----------------- 73 (225)
T 2vq2_A 13 QLAMEYMRGQDYRQATASIEDALKS--DPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKP----------------- 73 (225)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHh--CccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC-----------------
Confidence 3444555666666666666665532 112344556666666666666666666666554321
Q ss_pred CChHhHHHHHHHHHhc-CCHHHHHHHHHHHHhCCCCC
Q 047498 151 PDVSVYTSLVQSLAAS-LKVSDALRLIDDISRVGVSP 186 (566)
Q Consensus 151 PDVVTYNTLIdGLCKs-GRVdEAlkLLeEM~~rGcsP 186 (566)
.+..+|..+...+.+. |+.++|++.|+++.+.+..|
T Consensus 74 ~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~ 110 (225)
T 2vq2_A 74 DSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYP 110 (225)
T ss_dssp TCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCS
T ss_pred CChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCc
Confidence 2445555555566666 66666666666655533334
No 13
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.84 E-value=0.00012 Score=70.50 Aligned_cols=108 Identities=11% Similarity=0.021 Sum_probs=91.7
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWS 149 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~ 149 (566)
..+...+.+.|++++|+++|+++.+. ...+...|+.+..++++.|+.++|++.|+++...+.
T Consensus 30 ~~~~~~~~~~g~~~~A~~~~~~~l~~--~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p---------------- 91 (450)
T 2y4t_A 30 LELGKKLLAAGQLADALSQFHAAVDG--DPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKM---------------- 91 (450)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT----------------
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHh--CCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCC----------------
Confidence 56778899999999999999999852 234688999999999999999999999999987653
Q ss_pred CCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCc---ccccceecc
Q 047498 150 RPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEE---VPFGKVVRC 198 (566)
Q Consensus 150 ~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDv---VTYntLI~C 198 (566)
-+..+|+.+...|.+.|+.++|++.|+++.+. .|++. ..+..+++.
T Consensus 92 -~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~--~~~~~~~~~~~~~l~~~ 140 (450)
T 2y4t_A 92 -DFTAARLQRGHLLLKQGKLDEAEDDFKKVLKS--NPSENEEKEAQSQLIKS 140 (450)
T ss_dssp -TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS--CCCHHHHHHHHHHHHHH
T ss_pred -CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--CCCChhhHHHHHHHHHH
Confidence 46889999999999999999999999999874 56555 666666543
No 14
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.79 E-value=6.6e-05 Score=72.18 Aligned_cols=126 Identities=10% Similarity=-0.023 Sum_probs=91.3
Q ss_pred hHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCC----cc-ccc
Q 047498 69 EEELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSE----NG-TLV 143 (566)
Q Consensus 69 ~~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~Pdvv----TY-aLi 143 (566)
-..+...+.+.|+.++|++.|+++.+. ..-+...|+.+...|.+.|+.++|.++|+++.... |+.. .+ .+.
T Consensus 63 ~~~l~~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~--~~~~~~~~~~~~l~ 138 (450)
T 2y4t_A 63 YYRRATVFLAMGKSKAALPDLTKVIQL--KMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSN--PSENEEKEAQSQLI 138 (450)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSC--CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhc--CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--CCChhhHHHHHHHH
Confidence 356677788899999999999998753 22356788899999999999999999999988643 3321 11 110
Q ss_pred c------------------cc-----------ccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccc
Q 047498 144 D------------------RW-----------KWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGK 194 (566)
Q Consensus 144 ~------------------~~-----------rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYnt 194 (566)
. .+ .....+..+|+.+.+.|.+.|+.++|++.|+++.+. .|++..+|+.
T Consensus 139 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~--~~~~~~~~~~ 216 (450)
T 2y4t_A 139 KSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKL--KNDNTEAFYK 216 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCGGGGHHHHHHHHHH--HCSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--CCCCHHHHHH
Confidence 0 00 112347888999999999999999999999998875 4656777777
Q ss_pred eeccch
Q 047498 195 VVRCPT 200 (566)
Q Consensus 195 LI~C~t 200 (566)
+..++.
T Consensus 217 l~~~~~ 222 (450)
T 2y4t_A 217 ISTLYY 222 (450)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776553
No 15
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=97.79 E-value=7.4e-05 Score=66.27 Aligned_cols=96 Identities=10% Similarity=-0.012 Sum_probs=49.9
Q ss_pred HHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCC
Q 047498 72 LLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRP 151 (566)
Q Consensus 72 LIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~P 151 (566)
+-..+...|++++|.+.|++..+. ..-+...|..+...+.+.|+.++|.+.|+++..... .
T Consensus 43 ~a~~~~~~~~~~~A~~~~~~al~~--~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~-----------------~ 103 (252)
T 2ho1_A 43 LGLGYLQRGNTEQAKVPLRKALEI--DPSSADAHAALAVVFQTEMEPKLADEEYRKALASDS-----------------R 103 (252)
T ss_dssp HHHHHHHTTCTGGGHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------T
T ss_pred HHHHHHHcCChHHHHHHHHHHHhc--CCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCc-----------------C
Confidence 334455566666666666655431 112344555566666666666666666666554321 2
Q ss_pred ChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCC
Q 047498 152 DVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSP 186 (566)
Q Consensus 152 DVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsP 186 (566)
+...|..+...+.+.|+.++|+++|+++...+..|
T Consensus 104 ~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~ 138 (252)
T 2ho1_A 104 NARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYP 138 (252)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCT
T ss_pred cHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCc
Confidence 34445555555555555555555555555433344
No 16
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=97.75 E-value=7.9e-05 Score=70.23 Aligned_cols=109 Identities=16% Similarity=0.085 Sum_probs=87.0
Q ss_pred HHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCC
Q 047498 72 LLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRP 151 (566)
Q Consensus 72 LIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~P 151 (566)
+...+.+.|++++|.+.|+++.+......+...|+.+...+.+.|+.++|++.|++...... .
T Consensus 183 l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p-----------------~ 245 (365)
T 4eqf_A 183 MSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRP-----------------E 245 (365)
T ss_dssp ------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT-----------------T
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC-----------------C
Confidence 46678899999999999999985322223678999999999999999999999999987632 4
Q ss_pred ChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceeccc
Q 047498 152 DVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVRCP 199 (566)
Q Consensus 152 DVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~C~ 199 (566)
+..+|+.|...+.+.|+.++|++.|++..+. .|++...|..+-.++
T Consensus 246 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~l~~~~ 291 (365)
T 4eqf_A 246 DYSLWNRLGATLANGDRSEEAVEAYTRALEI--QPGFIRSRYNLGISC 291 (365)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--CCCchHHHHHHHHHH
Confidence 6889999999999999999999999999885 576667777766654
No 17
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.67 E-value=0.00033 Score=57.74 Aligned_cols=109 Identities=12% Similarity=0.022 Sum_probs=80.5
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWS 149 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~ 149 (566)
..+...+.+.|+.++|.+.+++..+. ...+...|..+...+.+.|+.++|.+.|+++.....
T Consensus 46 ~~~~~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~---------------- 107 (186)
T 3as5_A 46 LHLGIAYVKTGAVDRGTELLERSLAD--APDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANP---------------- 107 (186)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT----------------
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhc--CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCc----------------
Confidence 45566677888888888888888642 223566778888888888888888888888876532
Q ss_pred CCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceeccc
Q 047498 150 RPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVRCP 199 (566)
Q Consensus 150 ~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~C~ 199 (566)
.+...|..+...+.+.|+.++|++.|++..+.. |++...|..+..++
T Consensus 108 -~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~la~~~ 154 (186)
T 3as5_A 108 -INFNVRFRLGVALDNLGRFDEAIDSFKIALGLR--PNEGKVHRAIAFSY 154 (186)
T ss_dssp -TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHH
T ss_pred -HhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcC--ccchHHHHHHHHHH
Confidence 467778888888899999999999998887763 54555555555443
No 18
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=97.62 E-value=0.00086 Score=57.36 Aligned_cols=105 Identities=8% Similarity=-0.103 Sum_probs=60.9
Q ss_pred HHHHHHcC-CCHHHHHHHHHHHhhcCCCCc-ChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccC
Q 047498 72 LLSRVSGA-KDASEVLEIVAESSKRSGGVL-TVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWS 149 (566)
Q Consensus 72 LIrGLCKA-GrlDEAleLL~EM~er~Gg~P-DvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~ 149 (566)
+...+.+. |++++|.+.|+++.+ .+..| +...|..+...+.+.|+.++|++.|+++....
T Consensus 82 l~~~~~~~~~~~~~A~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~----------------- 143 (225)
T 2vq2_A 82 YGWFLCGRLNRPAESMAYFDKALA-DPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQ----------------- 143 (225)
T ss_dssp HHHHHHTTTCCHHHHHHHHHHHHT-STTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----------------
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHc-CcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----------------
Confidence 33444455 555555555555543 11111 23444555555555555555555555554332
Q ss_pred CCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCC-CCccccccee
Q 047498 150 RPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSP-GEEVPFGKVV 196 (566)
Q Consensus 150 ~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsP-dDvVTYntLI 196 (566)
.-+...|..+...+.+.|+.++|.+.|+++.+.. | ++...|..+.
T Consensus 144 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~~~~ 189 (225)
T 2vq2_A 144 PQFPPAFKELARTKMLAGQLGDADYYFKKYQSRV--EVLQADDLLLGW 189 (225)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH--CSCCHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCCHHHHHHHH
Confidence 2357788889999999999999999999887753 3 3444454433
No 19
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=97.62 E-value=0.00018 Score=69.00 Aligned_cols=115 Identities=11% Similarity=0.096 Sum_probs=74.7
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCcccccccc-------
Q 047498 74 SRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRW------- 146 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~------- 146 (566)
..+++.|+.++|++.|++ . .+...+..+...+++.|+.++|.+.|++|.... |+..-+.+..+|
T Consensus 109 ~~~~~~g~~~~Al~~l~~-~------~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~--p~~~~~~l~~a~~~l~~~~ 179 (291)
T 3mkr_A 109 SIYFYDQNPDAALRTLHQ-G------DSLECMAMTVQILLKLDRLDLARKELKKMQDQD--EDATLTQLATAWVSLAAGG 179 (291)
T ss_dssp HHHHHTTCHHHHHHHHTT-C------CSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHCCCHHHHHHHHhC-C------CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhC--cCcHHHHHHHHHHHHHhCc
Confidence 556677777777777766 1 355567777777777777777777777777553 332111000000
Q ss_pred --------------ccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceeccc
Q 047498 147 --------------KWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVRCP 199 (566)
Q Consensus 147 --------------rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~C~ 199 (566)
.....|...|+.+-..+++.|++++|.+.|++.... .|++.-+++.++.+.
T Consensus 180 ~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~--~p~~~~~l~~l~~~~ 244 (291)
T 3mkr_A 180 EKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDK--DSGHPETLINLVVLS 244 (291)
T ss_dssp THHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHH
Confidence 012457788888888888888888888888887764 466666666666543
No 20
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=97.61 E-value=0.00039 Score=67.42 Aligned_cols=102 Identities=8% Similarity=-0.051 Sum_probs=85.7
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCCh
Q 047498 74 SRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDV 153 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDV 153 (566)
+.+.+.|++++|++.|.++... .||...|..+..++.+.|+.++|++.|+++.+... -+.
T Consensus 14 ~~~~~~g~~~~A~~~~~~al~~---~p~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p-----------------~~~ 73 (514)
T 2gw1_A 14 NQFFRNKKYDDAIKYYNWALEL---KEDPVFYSNLSACYVSVGDLKKVVEMSTKALELKP-----------------DYS 73 (514)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHH---CCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCS-----------------CCH
T ss_pred HHHHHhccHHHHHHHHHHHHhc---CccHHHHHhHHHHHHHHhhHHHHHHHHHHHhccCh-----------------HHH
Confidence 4578899999999999999853 27999999999999999999999999999987642 456
Q ss_pred HhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceec
Q 047498 154 SVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVR 197 (566)
Q Consensus 154 VTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~ 197 (566)
.+|..+...+.+.|+.++|++.|+++.+.+ |.+...+..++.
T Consensus 74 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~--~~~~~~~~~~~~ 115 (514)
T 2gw1_A 74 KVLLRRASANEGLGKFADAMFDLSVLSLNG--DFNDASIEPMLE 115 (514)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHSS--SCCGGGTHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhcC--CCccchHHHHHH
Confidence 799999999999999999999999999876 323344444443
No 21
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=97.60 E-value=0.00058 Score=60.50 Aligned_cols=61 Identities=5% Similarity=-0.123 Sum_probs=49.6
Q ss_pred hHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhc
Q 047498 69 EEELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSS 131 (566)
Q Consensus 69 ~~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~sr 131 (566)
-..+-..+.+.|++++|.+.|++..+.. .-+...|..+...+.+.|+.++|+++|+++...
T Consensus 74 ~~~la~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 134 (252)
T 2ho1_A 74 HAALAVVFQTEMEPKLADEEYRKALASD--SRNARVLNNYGGFLYEQKRYEEAYQRLLEASQD 134 (252)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHC--cCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhC
Confidence 3456677888999999999999987522 236678899999999999999999999998873
No 22
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.50 E-value=0.00098 Score=54.88 Aligned_cols=95 Identities=11% Similarity=0.011 Sum_probs=80.9
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWS 149 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~ 149 (566)
..+...+.+.|++++|.+.|++..+. ...+...|..+...+.+.|+.++|.+.|++......
T Consensus 80 ~~~a~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~---------------- 141 (186)
T 3as5_A 80 TVLGLTYVQVQKYDLAVPLLIKVAEA--NPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRP---------------- 141 (186)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT----------------
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhc--CcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCc----------------
Confidence 45666788899999999999999752 224667889999999999999999999999887642
Q ss_pred CCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCC
Q 047498 150 RPDVSVYTSLVQSLAASLKVSDALRLIDDISRVG 183 (566)
Q Consensus 150 ~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rG 183 (566)
.+...|..+...+.+.|+.++|.+.+++..+..
T Consensus 142 -~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 174 (186)
T 3as5_A 142 -NEGKVHRAIAFSYEQMGRHEEALPHFKKANELD 174 (186)
T ss_dssp -TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred -cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 467889999999999999999999999987753
No 23
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=97.48 E-value=0.00057 Score=59.61 Aligned_cols=61 Identities=8% Similarity=-0.039 Sum_probs=45.8
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSF 132 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG 132 (566)
..+-..+.+.|+.++|.+.|++..+. ..-+...|..+...+.+.|+.++|+++|+++....
T Consensus 61 ~~la~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 121 (243)
T 2q7f_A 61 INFANLLSSVNELERALAFYDKALEL--DSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAG 121 (243)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHc--CCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 44556677788888888888888642 12356677888888888888888888888887654
No 24
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=97.46 E-value=0.00083 Score=64.32 Aligned_cols=110 Identities=9% Similarity=-0.016 Sum_probs=63.7
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCcc-cccccc---
Q 047498 71 ELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENG-TLVDRW--- 146 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTY-aLi~~~--- 146 (566)
.+.+.+-..|+.++|+.-|+.. ..|+..++..+...+++.|+.++|++.|++|...++.|+...+ ......
T Consensus 39 ~l~r~yi~~g~~~~al~~~~~~-----~~~~~~a~~~la~~~~~~~~~~~A~~~l~~ll~~~~~P~~~~~~~~la~~~~~ 113 (291)
T 3mkr_A 39 FLYRAYLAQRKYGVVLDEIKPS-----SAPELQAVRMFAEYLASHSRRDAIVAELDREMSRSVDVTNTTFLLMAASIYFY 113 (291)
T ss_dssp HHHHHHHHTTCHHHHHHHSCTT-----SCHHHHHHHHHHHHHHCSTTHHHHHHHHHHHHHSCCCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHhccc-----CChhHHHHHHHHHHHcCCCcHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHH
Confidence 3445555555555555544331 1245555555555555555555555555555555544443322 100000
Q ss_pred --cc--------CCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCC
Q 047498 147 --KW--------SRPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPG 187 (566)
Q Consensus 147 --rw--------~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPd 187 (566)
++ -..+...|..+...|++.|+.++|.+.|++|.+.. |+
T Consensus 114 ~g~~~~Al~~l~~~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~--p~ 162 (291)
T 3mkr_A 114 DQNPDAALRTLHQGDSLECMAMTVQILLKLDRLDLARKELKKMQDQD--ED 162 (291)
T ss_dssp TTCHHHHHHHHTTCCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TT
T ss_pred CCCHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhC--cC
Confidence 00 02567788888889999999999999999988764 63
No 25
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=97.45 E-value=0.0011 Score=58.88 Aligned_cols=97 Identities=9% Similarity=-0.184 Sum_probs=82.0
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWS 149 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~ 149 (566)
..+-..+...|++++|.+.|++..+. ..-+...|+.+-..+++.|+.++|++.|++......
T Consensus 47 ~~l~~~~~~~~~~~~A~~~~~~al~~--~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~---------------- 108 (275)
T 1xnf_A 47 YERGVLYDSLGLRALARNDFSQALAI--RPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDP---------------- 108 (275)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT----------------
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHc--CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCc----------------
Confidence 45667788899999999999999753 223678899999999999999999999999987532
Q ss_pred CCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCC
Q 047498 150 RPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPG 187 (566)
Q Consensus 150 ~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPd 187 (566)
.+...|..+-..+.+.|+.++|++.|+++.+. .|+
T Consensus 109 -~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~--~~~ 143 (275)
T 1xnf_A 109 -TYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD--DPN 143 (275)
T ss_dssp -TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTT
T ss_pred -cccHHHHHHHHHHHHhccHHHHHHHHHHHHHh--CCC
Confidence 36788999999999999999999999999884 463
No 26
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=97.44 E-value=0.0019 Score=49.22 Aligned_cols=97 Identities=8% Similarity=-0.063 Sum_probs=78.9
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCC
Q 047498 71 ELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSR 150 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~ 150 (566)
.+-..+.+.|++++|...|++..+.. .-+...|..+-..+.+.|+.++|++.|++..+.... .
T Consensus 11 ~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~---------------~ 73 (112)
T 2kck_A 11 LEGVLQYDAGNYTESIDLFEKAIQLD--PEESKYWLMKGKALYNLERYEEAVDCYNYVINVIED---------------E 73 (112)
T ss_dssp GHHHHHHSSCCHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC---------------T
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhC--cCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc---------------c
Confidence 34455778999999999999987522 235677889999999999999999999998865320 0
Q ss_pred CChHhHHHHHHHHHhc-CCHHHHHHHHHHHHhCCC
Q 047498 151 PDVSVYTSLVQSLAAS-LKVSDALRLIDDISRVGV 184 (566)
Q Consensus 151 PDVVTYNTLIdGLCKs-GRVdEAlkLLeEM~~rGc 184 (566)
-+...|..+-..+.+. |+.++|++.|++.....-
T Consensus 74 ~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p 108 (112)
T 2kck_A 74 YNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHH 108 (112)
T ss_dssp TCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCC
T ss_pred chHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhccc
Confidence 1578899999999999 999999999999987653
No 27
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=97.43 E-value=0.0024 Score=50.39 Aligned_cols=93 Identities=13% Similarity=-0.019 Sum_probs=78.4
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCC
Q 047498 71 ELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSR 150 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~ 150 (566)
.+-..+.+.|++++|.+.|++..+. ..-+...|..+-..+.+.|+.++|++.|++......
T Consensus 21 ~~~~~~~~~~~~~~A~~~~~~al~~--~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~----------------- 81 (133)
T 2lni_A 21 NKGNECFQKGDYPQAMKHYTEAIKR--NPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEP----------------- 81 (133)
T ss_dssp HHHHHHHHTTCSHHHHHHHHHHHTT--CTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCT-----------------
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHc--CCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-----------------
Confidence 3455678899999999999999742 223677889999999999999999999999886532
Q ss_pred CChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 151 PDVSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 151 PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
.+...|..+-..+.+.|+.++|++.|++..+.
T Consensus 82 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 82 TFIKGYTRKAAALEAMKDYTKAMDVYQKALDL 113 (133)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 46778999999999999999999999998774
No 28
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=97.40 E-value=0.00091 Score=63.01 Aligned_cols=93 Identities=9% Similarity=0.004 Sum_probs=80.8
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCC
Q 047498 71 ELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSR 150 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~ 150 (566)
.+-..+.+.|++++|.+.|+++.+. ..-+...|+.+...+.+.|+.++|++.|+++.....
T Consensus 70 ~~~~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p----------------- 130 (365)
T 4eqf_A 70 EEGLKRLKEGDLPVTILFMEAAILQ--DPGDAEAWQFLGITQAENENEQAAIVALQRCLELQP----------------- 130 (365)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHh--CcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCC-----------------
Confidence 3456788899999999999999753 224678899999999999999999999999987632
Q ss_pred CChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 151 PDVSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 151 PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
-+..+|+.|...|.+.|+.++|++.|+++.+.
T Consensus 131 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 162 (365)
T 4eqf_A 131 NNLKALMALAVSYTNTSHQQDACEALKNWIKQ 162 (365)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHccccHHHHHHHHHHHHHh
Confidence 45889999999999999999999999999884
No 29
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=97.38 E-value=0.0016 Score=60.61 Aligned_cols=94 Identities=12% Similarity=0.046 Sum_probs=82.0
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCC
Q 047498 71 ELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSR 150 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~ 150 (566)
.+-..+.+.|++++|++.|+++.+. ..-+...|..+-..+.+.|+.++|++.|+++.....
T Consensus 69 ~~~~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~----------------- 129 (368)
T 1fch_A 69 EEGLRRLQEGDLPNAVLLFEAAVQQ--DPKHMEAWQYLGTTQAENEQELLAISALRRCLELKP----------------- 129 (368)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHS--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCC-----------------
Confidence 4556788999999999999999852 234677899999999999999999999999987642
Q ss_pred CChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCC
Q 047498 151 PDVSVYTSLVQSLAASLKVSDALRLIDDISRVG 183 (566)
Q Consensus 151 PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rG 183 (566)
.+..+|..+...+.+.|+.++|++.|+++....
T Consensus 130 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~ 162 (368)
T 1fch_A 130 DNQTALMALAVSFTNESLQRQACEILRDWLRYT 162 (368)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTS
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 478899999999999999999999999999854
No 30
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=97.37 E-value=0.0027 Score=49.37 Aligned_cols=97 Identities=10% Similarity=-0.010 Sum_probs=80.4
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCC
Q 047498 71 ELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSR 150 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~ 150 (566)
.+-..+...|++++|.+.|++..+.. ..+...|..+-..+.+.|+.++|++.|++......
T Consensus 17 ~~~~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~----------------- 77 (131)
T 2vyi_A 17 TEGNEQMKVENFEAAVHFYGKAIELN--PANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDP----------------- 77 (131)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCc-----------------
Confidence 45566778999999999999987422 23667889999999999999999999999886532
Q ss_pred CChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCC
Q 047498 151 PDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGE 188 (566)
Q Consensus 151 PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdD 188 (566)
.+...|..+-..+.+.|+.++|++.|++..+. .|++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--~p~~ 113 (131)
T 2vyi_A 78 AYSKAYGRMGLALSSLNKHVEAVAYYKKALEL--DPDN 113 (131)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--STTC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc--Cccc
Confidence 45778999999999999999999999998876 4543
No 31
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=97.36 E-value=0.00067 Score=60.30 Aligned_cols=103 Identities=11% Similarity=-0.095 Sum_probs=83.4
Q ss_pred cCCCHHHHHHHHHHHhhcCCC--CcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHh
Q 047498 78 GAKDASEVLEIVAESSKRSGG--VLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSV 155 (566)
Q Consensus 78 KAGrlDEAleLL~EM~er~Gg--~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVT 155 (566)
..|++++|++.|+++.+.... .-+...|..+-..+.+.|+.++|++.|++...... .+..+
T Consensus 17 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~-----------------~~~~~ 79 (275)
T 1xnf_A 17 PTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRP-----------------DMPEV 79 (275)
T ss_dssp CCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-----------------CCHHH
T ss_pred ccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCC-----------------CcHHH
Confidence 358899999999999853111 12567889999999999999999999999987642 46889
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceeccc
Q 047498 156 YTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVRCP 199 (566)
Q Consensus 156 YNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~C~ 199 (566)
|..|-..+++.|++++|++.|++..+. .|++...|..+-.++
T Consensus 80 ~~~la~~~~~~~~~~~A~~~~~~al~~--~~~~~~~~~~la~~~ 121 (275)
T 1xnf_A 80 FNYLGIYLTQAGNFDAAYEAFDSVLEL--DPTYNYAHLNRGIAL 121 (275)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCTHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhc--CccccHHHHHHHHHH
Confidence 999999999999999999999999885 565556666555544
No 32
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=97.35 E-value=0.0017 Score=58.80 Aligned_cols=95 Identities=7% Similarity=-0.093 Sum_probs=79.1
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWS 149 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~ 149 (566)
..+...+.+.|++++|.+.|++..+. ..-+...|+.+...+.+.|+.++|++.|+++.....
T Consensus 176 ~~la~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~---------------- 237 (327)
T 3cv0_A 176 ASLGVLYNLSNNYDSAAANLRRAVEL--RPDDAQLWNKLGATLANGNRPQEALDAYNRALDINP---------------- 237 (327)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT----------------
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHh--CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC----------------
Confidence 45667788899999999999998742 223567889999999999999999999999876532
Q ss_pred CCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCC
Q 047498 150 RPDVSVYTSLVQSLAASLKVSDALRLIDDISRVG 183 (566)
Q Consensus 150 ~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rG 183 (566)
.+..+|..+...+.+.|+.++|.+.|++..+..
T Consensus 238 -~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 270 (327)
T 3cv0_A 238 -GYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQ 270 (327)
T ss_dssp -TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 467889999999999999999999999998754
No 33
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=97.35 E-value=0.0032 Score=48.23 Aligned_cols=92 Identities=11% Similarity=-0.060 Sum_probs=77.3
Q ss_pred HHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCC
Q 047498 72 LLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRP 151 (566)
Q Consensus 72 LIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~P 151 (566)
+-..+...|++++|.+.|.+..... .-+...|..+-..+.+.|+.++|++.|++...... .
T Consensus 10 ~~~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-----------------~ 70 (118)
T 1elw_A 10 KGNKALSVGNIDDALQCYSEAIKLD--PHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKP-----------------D 70 (118)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT-----------------T
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHC--CCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCc-----------------c
Confidence 4456778999999999999997422 23667788899999999999999999999886532 3
Q ss_pred ChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 152 DVSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 152 DVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
+...|..+-..+.+.|+.++|.+.|++..+.
T Consensus 71 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 101 (118)
T 1elw_A 71 WGKGYSRKAAALEFLNRFEEAKRTYEEGLKH 101 (118)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHc
Confidence 5778999999999999999999999998864
No 34
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=97.32 E-value=0.0017 Score=60.42 Aligned_cols=94 Identities=5% Similarity=-0.134 Sum_probs=67.8
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWS 149 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~ 149 (566)
..+-..+.+.|++++|.+.|.+..+. ..-+...|+.+...+.+.|+.++|++.|+++....
T Consensus 221 ~~l~~~~~~~g~~~~A~~~~~~al~~--~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~----------------- 281 (368)
T 1fch_A 221 CGLGVLFNLSGEYDKAVDCFTAALSV--RPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQ----------------- 281 (368)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----------------
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh--CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----------------
Confidence 34555666777777777777776532 11245567777777777777777777777766542
Q ss_pred CCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 150 RPDVSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 150 ~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
..+..+|..|-..+.+.|+.++|++.|++..+.
T Consensus 282 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 314 (368)
T 1fch_A 282 PGYIRSRYNLGISCINLGAHREAVEHFLEALNM 314 (368)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 246788999999999999999999999988764
No 35
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=97.27 E-value=0.0023 Score=55.73 Aligned_cols=107 Identities=13% Similarity=0.080 Sum_probs=75.2
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCC
Q 047498 71 ELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSR 150 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~ 150 (566)
.+...+.+.|++++|.+.|.+..+. ...+...|..+...+.+.|+.++|++.|+++.....
T Consensus 96 ~la~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~----------------- 156 (243)
T 2q7f_A 96 GAGNVYVVKEMYKEAKDMFEKALRA--GMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNE----------------- 156 (243)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH--TCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCT-----------------
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-----------------
Confidence 4456677788888888888887642 123556677788888888888888888888775532
Q ss_pred CChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceecc
Q 047498 151 PDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVRC 198 (566)
Q Consensus 151 PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~C 198 (566)
.+...|..+...+.+.|+.++|++.|++..+. .|++...|..+..+
T Consensus 157 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~la~~ 202 (243)
T 2q7f_A 157 NDTEARFQFGMCLANEGMLDEALSQFAAVTEQ--DPGHADAFYNAGVT 202 (243)
T ss_dssp TCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH--CTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CcccHHHHHHHHHH
Confidence 35677888888888888888888888887765 34444445444443
No 36
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.23 E-value=0.011 Score=47.58 Aligned_cols=93 Identities=11% Similarity=-0.081 Sum_probs=78.2
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcC----hhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccc
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLT----VDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDR 145 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PD----vvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~ 145 (566)
..+-..+.+.|++++|.+.|.+..+. .|+ ...|..+-..+.+.|+.++|++.|++......
T Consensus 32 ~~~a~~~~~~~~~~~A~~~~~~a~~~---~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~------------ 96 (148)
T 2dba_A 32 RKEGNELFKCGDYGGALAAYTQALGL---DATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDG------------ 96 (148)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTS------------
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHH---cccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCc------------
Confidence 34455677899999999999999842 355 67788899999999999999999999876532
Q ss_pred cccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 146 WKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 146 ~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
.+...|..+-..+.+.|+.++|++.|++..+.
T Consensus 97 -----~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 97 -----GDVKALYRRSQALEKLGRLDQAVLDLQRCVSL 128 (148)
T ss_dssp -----CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred -----cCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 36778889999999999999999999998874
No 37
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=97.22 E-value=0.0021 Score=50.16 Aligned_cols=97 Identities=13% Similarity=0.084 Sum_probs=78.6
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCC
Q 047498 71 ELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSR 150 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~ 150 (566)
.+-..+...|++++|...|.+..+. ...+...|..+-..+.+.|+.++|+..|++....... ..
T Consensus 9 ~l~~~~~~~~~~~~A~~~~~~a~~~--~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~--------------~~ 72 (131)
T 1elr_A 9 ELGNDAYKKKDFDTALKHYDKAKEL--DPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRE--------------NR 72 (131)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH--------------ST
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHhc--CCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccc--------------cc
Confidence 3445678899999999999999753 2236677899999999999999999999998765320 01
Q ss_pred CC----hHhHHHHHHHHHhcCCHHHHHHHHHHHHhCC
Q 047498 151 PD----VSVYTSLVQSLAASLKVSDALRLIDDISRVG 183 (566)
Q Consensus 151 PD----VVTYNTLIdGLCKsGRVdEAlkLLeEM~~rG 183 (566)
++ ..+|..+-..+.+.|+.++|.+.|++..+..
T Consensus 73 ~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 109 (131)
T 1elr_A 73 EDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEH 109 (131)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 22 7789999999999999999999999998854
No 38
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=97.20 E-value=0.0016 Score=54.73 Aligned_cols=95 Identities=17% Similarity=0.014 Sum_probs=80.0
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCCh
Q 047498 74 SRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDV 153 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDV 153 (566)
+.+.+.|++++|++.|.+..+.. .-+...|.-+=.+|.+.|+.++|++.|++..+... -+.
T Consensus 21 ~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p-----------------~~~ 81 (126)
T 4gco_A 21 NEYFKKGDYPTAMRHYNEAVKRD--PENAILYSNRAACLTKLMEFQRALDDCDTCIRLDS-----------------KFI 81 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------TCH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhh-----------------hhh
Confidence 35788999999999999987522 24677889999999999999999999999876532 467
Q ss_pred HhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCc
Q 047498 154 SVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEE 189 (566)
Q Consensus 154 VTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDv 189 (566)
..|..+-..+.+.|+.++|++.|++..+ +.|++.
T Consensus 82 ~a~~~lg~~~~~~~~~~~A~~~~~~al~--l~P~~~ 115 (126)
T 4gco_A 82 KGYIRKAACLVAMREWSKAQRAYEDALQ--VDPSNE 115 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HCTTCH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHH--HCcCCH
Confidence 7899999999999999999999999887 467553
No 39
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=97.18 E-value=0.0024 Score=57.90 Aligned_cols=116 Identities=8% Similarity=-0.060 Sum_probs=70.6
Q ss_pred HHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCC
Q 047498 72 LLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRP 151 (566)
Q Consensus 72 LIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~P 151 (566)
+-..+.+.|++++|.+.|++..+. ..-+...|+.+...+.+.|+.++|.+.|++.....-. .........
T Consensus 165 l~~~~~~~~~~~~A~~~~~~al~~--~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~--------~~~~~~~~~ 234 (330)
T 3hym_B 165 IGLEYGLTNNSKLAERFFSQALSI--APEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKA--------IGNEVTVDK 234 (330)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTT--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT--------TSCSCTTTT
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHh--CCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhh--------ccccccccH
Confidence 344455566666666666665531 1223455566666666666666666666665543110 000000124
Q ss_pred ChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceeccc
Q 047498 152 DVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVRCP 199 (566)
Q Consensus 152 DVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~C~ 199 (566)
+..+|+.+-..+.+.|+.++|++.|++..+. .|++...|..+-.++
T Consensus 235 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~--~~~~~~~~~~la~~~ 280 (330)
T 3hym_B 235 WEPLLNNLGHVCRKLKKYAEALDYHRQALVL--IPQNASTYSAIGYIH 280 (330)
T ss_dssp CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--STTCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh--CccchHHHHHHHHHH
Confidence 4678999999999999999999999999875 465556666665554
No 40
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=97.17 E-value=0.0023 Score=58.01 Aligned_cols=109 Identities=6% Similarity=-0.036 Sum_probs=82.3
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWS 149 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~ 149 (566)
-.+...+...|++++|+++|+++.+. ...+...+..+...+.+.|+.++|+.+|+++.....
T Consensus 26 ~~~a~~~~~~g~~~~A~~~~~~~l~~--~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~---------------- 87 (330)
T 3hym_B 26 VSLAERHYYNCDFKMCYKLTSVVMEK--DPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYP---------------- 87 (330)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCT----------------
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHc--CCCChhhHHHHHHHHHHhhhHHHHHHHHHHHHHhCc----------------
Confidence 45667788889999999999998753 223455677788999999999999999999987532
Q ss_pred CCChHhHHHHHHHHHhcC-CHHHHHHHHHHHHhCCCCCCCcccccceeccc
Q 047498 150 RPDVSVYTSLVQSLAASL-KVSDALRLIDDISRVGVSPGEEVPFGKVVRCP 199 (566)
Q Consensus 150 ~PDVVTYNTLIdGLCKsG-RVdEAlkLLeEM~~rGcsPdDvVTYntLI~C~ 199 (566)
-+...|..+-..+.+.| +.++|++.|++..+. .|++...|..+..++
T Consensus 88 -~~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~--~~~~~~~~~~l~~~~ 135 (330)
T 3hym_B 88 -SNPVSWFAVGCYYLMVGHKNEHARRYLSKATTL--EKTYGPAWIAYGHSF 135 (330)
T ss_dssp -TSTHHHHHHHHHHHHSCSCHHHHHHHHHHHHTT--CTTCTHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh--CCccHHHHHHHHHHH
Confidence 35677888888888888 888888888888764 354455555555443
No 41
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=97.15 E-value=0.0043 Score=54.18 Aligned_cols=95 Identities=13% Similarity=-0.064 Sum_probs=78.8
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWS 149 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~ 149 (566)
..+-..+.+.|++++|.+.|++..+. ..-+...|..+-..+.+.|+.++|++.|++......
T Consensus 143 ~~~~~~~~~~~~~~~A~~~~~~a~~~--~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~---------------- 204 (258)
T 3uq3_A 143 RLEGKEYFTKSDWPNAVKAYTEMIKR--APEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDP---------------- 204 (258)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT----------------
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhc--CcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCH----------------
Confidence 34556778899999999999999752 223577889999999999999999999999876532
Q ss_pred CCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCC
Q 047498 150 RPDVSVYTSLVQSLAASLKVSDALRLIDDISRVG 183 (566)
Q Consensus 150 ~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rG 183 (566)
.+..+|..+-..+.+.|+.++|++.|++..+..
T Consensus 205 -~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 205 -NFVRAYIRKATAQIAVKEYASALETLDAARTKD 237 (258)
T ss_dssp -TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhC
Confidence 457889999999999999999999999887643
No 42
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=97.11 E-value=0.0041 Score=56.30 Aligned_cols=92 Identities=11% Similarity=-0.025 Sum_probs=79.3
Q ss_pred HHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCC
Q 047498 72 LLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRP 151 (566)
Q Consensus 72 LIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~P 151 (566)
+-..+.+.|++++|.++|+++.+. ..-+...|..+...+.+.|+.++|.+.|+++..... .
T Consensus 27 ~a~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~-----------------~ 87 (327)
T 3cv0_A 27 EGLSMLKLANLAEAALAFEAVCQA--APEREEAWRSLGLTQAENEKDGLAIIALNHARMLDP-----------------K 87 (327)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------T
T ss_pred HHHHHHHhccHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCc-----------------C
Confidence 345678899999999999999753 223677889999999999999999999999987642 4
Q ss_pred ChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 152 DVSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 152 DVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
+..+|..+...+.+.|+.++|++.|+++.+.
T Consensus 88 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 118 (327)
T 3cv0_A 88 DIAVHAALAVSHTNEHNANAALASLRAWLLS 118 (327)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 7888999999999999999999999999875
No 43
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=97.11 E-value=0.0064 Score=48.47 Aligned_cols=92 Identities=10% Similarity=-0.016 Sum_probs=73.5
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcCCCCcCh----hhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccC
Q 047498 74 SRVSGAKDASEVLEIVAESSKRSGGVLTV----DECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWS 149 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~Gg~PDv----vTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~ 149 (566)
..+.+.|++++|.+.|.+..+.. |+. ..+..+-..+.+.|+.++|+..|++.......
T Consensus 10 ~~~~~~~~~~~A~~~~~~~~~~~---p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~--------------- 71 (129)
T 2xev_A 10 FDALKNGKYDDASQLFLSFLELY---PNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPT--------------- 71 (129)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHC---SSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------
T ss_pred HHHHHhCCHHHHHHHHHHHHHHC---CCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC---------------
Confidence 45678999999999999997532 332 36777888999999999999999998876321
Q ss_pred CCC-hHhHHHHHHHHHhcCCHHHHHHHHHHHHhCC
Q 047498 150 RPD-VSVYTSLVQSLAASLKVSDALRLIDDISRVG 183 (566)
Q Consensus 150 ~PD-VVTYNTLIdGLCKsGRVdEAlkLLeEM~~rG 183 (566)
.|. ...|..+-..+.+.|+.++|++.|++.....
T Consensus 72 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~ 106 (129)
T 2xev_A 72 HDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQY 106 (129)
T ss_dssp STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 111 4667888889999999999999999998864
No 44
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=97.00 E-value=0.0074 Score=48.75 Aligned_cols=90 Identities=13% Similarity=-0.031 Sum_probs=76.4
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCCh
Q 047498 74 SRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDV 153 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDV 153 (566)
..+.+.|++++|++.|.+..+.. .-+...|.-+-.++.+.|+.++|++.|++..+... -+.
T Consensus 12 ~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p-----------------~~~ 72 (126)
T 3upv_A 12 KEYFTKSDWPNAVKAYTEMIKRA--PEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDP-----------------NFV 72 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------TCH
T ss_pred HHHHHhcCHHHHHHHHHHHHHhC--CCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC-----------------CcH
Confidence 45778999999999999987522 23567899999999999999999999999886532 357
Q ss_pred HhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 154 SVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 154 VTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
..|..+-..+.+.|+.++|++.|++..+.
T Consensus 73 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 101 (126)
T 3upv_A 73 RAYIRKATAQIAVKEYASALETLDAARTK 101 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHh
Confidence 78999999999999999999999988774
No 45
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=96.98 E-value=0.0094 Score=50.64 Aligned_cols=97 Identities=7% Similarity=-0.119 Sum_probs=80.3
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCC
Q 047498 71 ELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSR 150 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~ 150 (566)
.+-..+.+.|++++|++.|++..+.. .-+...|+.+-..|.+.|+.++|+..|++......
T Consensus 16 ~~g~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p----------------- 76 (164)
T 3sz7_A 16 SEGNAAMARKEYSKAIDLYTQALSIA--PANPIYLSNRAAAYSASGQHEKAAEDAELATVVDP----------------- 76 (164)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC--CcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-----------------
Confidence 34456778999999999999997532 22677889999999999999999999999886532
Q ss_pred CChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCC
Q 047498 151 PDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGE 188 (566)
Q Consensus 151 PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdD 188 (566)
-+...|..+-..|.+.|+.++|++.|++..+. .|++
T Consensus 77 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--~p~~ 112 (164)
T 3sz7_A 77 KYSKAWSRLGLARFDMADYKGAKEAYEKGIEA--EGNG 112 (164)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--HSSS
T ss_pred CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--CCCc
Confidence 35788999999999999999999999998874 3643
No 46
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=96.96 E-value=0.0069 Score=50.72 Aligned_cols=91 Identities=7% Similarity=-0.194 Sum_probs=75.6
Q ss_pred HHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCC
Q 047498 73 LSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPD 152 (566)
Q Consensus 73 IrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PD 152 (566)
-..+.+.|++++|.+.|++..... .-|...|..+=..+.+.|+.++|+..|++...... -|
T Consensus 25 a~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p-----------------~~ 85 (142)
T 2xcb_A 25 GFNQYQAGKWDDAQKIFQALCMLD--HYDARYFLGLGACRQSLGLYEQALQSYSYGALMDI-----------------NE 85 (142)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------TC
T ss_pred HHHHHHHccHHHHHHHHHHHHHhC--CccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC-----------------CC
Confidence 345778999999999999987422 23566788888899999999999999999887643 35
Q ss_pred hHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 153 VSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 153 VVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
...|..+-..|.+.|+.++|++.|+...+.
T Consensus 86 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 115 (142)
T 2xcb_A 86 PRFPFHAAECHLQLGDLDGAESGFYSARAL 115 (142)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 667888899999999999999999998765
No 47
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=96.96 E-value=0.0043 Score=54.14 Aligned_cols=94 Identities=10% Similarity=0.042 Sum_probs=78.8
Q ss_pred HHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCC
Q 047498 72 LLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRP 151 (566)
Q Consensus 72 LIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~P 151 (566)
+-..+.+.|++++|++.|.+..+. . .+...|..+-..+.+.|+.++|++.|++.....-. ..|
T Consensus 11 ~g~~~~~~~~~~~A~~~~~~a~~~-~--~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~--------------~~~ 73 (258)
T 3uq3_A 11 EGNKFYKARQFDEAIEHYNKAWEL-H--KDITYLNNRAAAEYEKGEYETAISTLNDAVEQGRE--------------MRA 73 (258)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-S--CCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--------------TTC
T ss_pred HHHHHHHhccHHHHHHHHHHHHHh-h--ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcc--------------ccc
Confidence 445677899999999999999863 3 67889999999999999999999999998764210 012
Q ss_pred C----hHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 152 D----VSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 152 D----VVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
+ ..+|..+-..+.+.|+.++|++.|++..+.
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 108 (258)
T 3uq3_A 74 DYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTE 108 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhc
Confidence 2 688999999999999999999999999884
No 48
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=96.94 E-value=0.0069 Score=52.51 Aligned_cols=89 Identities=12% Similarity=-0.096 Sum_probs=77.3
Q ss_pred HHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCC
Q 047498 73 LSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPD 152 (566)
Q Consensus 73 IrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PD 152 (566)
-..+.+.|++++|++.|.+... |+...|+.+-..+.+.|+.++|++.|++...... -+
T Consensus 13 g~~~~~~~~~~~A~~~~~~a~~-----~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~-----------------~~ 70 (213)
T 1hh8_A 13 GVLAADKKDWKGALDAFSAVQD-----PHSRICFNIGCMYTILKNMTEAEKAFTRSINRDK-----------------HL 70 (213)
T ss_dssp HHHHHHTTCHHHHHHHHHTSSS-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------TC
T ss_pred HHHHHHhCCHHHHHHHHHHHcC-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc-----------------cc
Confidence 3456789999999999998862 5778999999999999999999999999876532 46
Q ss_pred hHhHHHHHHHHHhcCCHHHHHHHHHHHHhCC
Q 047498 153 VSVYTSLVQSLAASLKVSDALRLIDDISRVG 183 (566)
Q Consensus 153 VVTYNTLIdGLCKsGRVdEAlkLLeEM~~rG 183 (566)
...|..+-..+.+.|+.++|++.|++..+..
T Consensus 71 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 101 (213)
T 1hh8_A 71 AVAYFQRGMLYYQTEKYDLAIKDLKEALIQL 101 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHcccHHHHHHHHHHHHHhC
Confidence 7889999999999999999999999998853
No 49
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=96.92 E-value=0.0098 Score=47.89 Aligned_cols=93 Identities=12% Similarity=-0.051 Sum_probs=77.9
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCC
Q 047498 71 ELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSR 150 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~ 150 (566)
.+-..+.+.|++++|...|.+..... .-+...|..+-..+.+.|+.++|+..|++......
T Consensus 14 ~~g~~~~~~~~~~~A~~~~~~al~~~--~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p----------------- 74 (137)
T 3q49_B 14 EQGNRLFVGRKYPEAAACYGRAITRN--PLVAVYYTNRALCYLKMQQPEQALADCRRALELDG----------------- 74 (137)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHhhC--cCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc-----------------
Confidence 34456778999999999999987422 23567889999999999999999999999887542
Q ss_pred CChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 151 PDVSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 151 PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
-+...|..+-..+.+.|+.++|++.|++..+.
T Consensus 75 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 106 (137)
T 3q49_B 75 QSVKAHFFLGQCQLEMESYDEAIANLQRAYSL 106 (137)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 35778999999999999999999999998774
No 50
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=96.89 E-value=0.0018 Score=57.02 Aligned_cols=121 Identities=9% Similarity=-0.024 Sum_probs=86.8
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcC-----CC-CcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccc
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRS-----GG-VLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLV 143 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~-----Gg-~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi 143 (566)
..+-..+...|++++|.+.|.+..+.. +. .....+|+.+-..+.+.|+.++|++.|++.....-+ .
T Consensus 47 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~--------~ 118 (283)
T 3edt_B 47 NILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREK--------V 118 (283)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH--------H
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH--------H
Confidence 455667888999999999999886321 11 234567899999999999999999999998754100 0
Q ss_pred cccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC------CCCCCCcccccceeccc
Q 047498 144 DRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRV------GVSPGEEVPFGKVVRCP 199 (566)
Q Consensus 144 ~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r------GcsPdDvVTYntLI~C~ 199 (566)
.+ ........+|+.|-..+.+.|++++|.+.|++..+. +-.|+....|..+-.++
T Consensus 119 ~~-~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~ 179 (283)
T 3edt_B 119 LG-KFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCY 179 (283)
T ss_dssp HC-TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHH
T ss_pred cC-CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 00 000124778999999999999999999999998876 33453445555555544
No 51
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=96.88 E-value=0.0063 Score=54.29 Aligned_cols=106 Identities=9% Similarity=-0.034 Sum_probs=79.2
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCC-
Q 047498 74 SRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPD- 152 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PD- 152 (566)
..+.+.|++++|++.|++..+.. .-+...|..+-..+.+.|+.++|++.|++....+- .|+
T Consensus 11 ~~~~~~~~~~~A~~~~~~~l~~~--p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~----------------~~~~ 72 (272)
T 3u4t_A 11 DFLFKNNNYAEAIEVFNKLEAKK--YNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVN----------------ATKA 72 (272)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHTT--CCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSC----------------TTTC
T ss_pred HHHHHhcCHHHHHHHHHHHHHhC--CCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccC----------------chhH
Confidence 45778999999999999987522 12444788889999999999999999999887432 233
Q ss_pred -hHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceeccc
Q 047498 153 -VSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVRCP 199 (566)
Q Consensus 153 -VVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~C~ 199 (566)
...|..+-..+.+.|+.++|++.|++..+. .|++...|..+-.++
T Consensus 73 ~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~~~~~~~l~~~~ 118 (272)
T 3u4t_A 73 KSADFEYYGKILMKKGQDSLAIQQYQAAVDR--DTTRLDMYGQIGSYF 118 (272)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--STTCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHhc--CcccHHHHHHHHHHH
Confidence 234888888899999999999999988874 454445555544443
No 52
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=96.87 E-value=0.002 Score=57.98 Aligned_cols=121 Identities=8% Similarity=-0.053 Sum_probs=86.6
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcC-----C-CCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccc
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRS-----G-GVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLV 143 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~-----G-g~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi 143 (566)
..+-..+...|++++|.+.|++..+.. + .......|+.+-..+.+.|+.++|.+.|++.....-+ .
T Consensus 73 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~--------~ 144 (311)
T 3nf1_A 73 NILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREK--------V 144 (311)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH--------H
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH--------h
Confidence 455667888999999999999886421 1 1234567899999999999999999999998764100 0
Q ss_pred cccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC------CCCCCCcccccceeccc
Q 047498 144 DRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRV------GVSPGEEVPFGKVVRCP 199 (566)
Q Consensus 144 ~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r------GcsPdDvVTYntLI~C~ 199 (566)
.+ ....-+...|+.+-..+.+.|++++|+++|++.... +-.|+....|..+-.++
T Consensus 145 ~~-~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~ 205 (311)
T 3nf1_A 145 LG-KDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCY 205 (311)
T ss_dssp HC-TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHH
T ss_pred cC-CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 00 000124667899999999999999999999998775 44553444555555544
No 53
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=96.86 E-value=0.014 Score=47.89 Aligned_cols=98 Identities=15% Similarity=-0.007 Sum_probs=79.4
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCC
Q 047498 71 ELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSR 150 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~ 150 (566)
.+-..+.+.|++++|.+.|.+..+.. .-+...|..+-..+.+.|+.++|++.|++......
T Consensus 18 ~~a~~~~~~~~~~~A~~~~~~al~~~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~----------------- 78 (166)
T 1a17_A 18 TQANDYFKAKDYENAIKFYSQAIELN--PSNAIYYGNRSLAYLRTECYGYALGDATRAIELDK----------------- 78 (166)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHhC--CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc-----------------
Confidence 34455678999999999999987422 23577888999999999999999999999876532
Q ss_pred CChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCc
Q 047498 151 PDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEE 189 (566)
Q Consensus 151 PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDv 189 (566)
.+...|..+-..+.+.|+.++|++.|++..+. .|++.
T Consensus 79 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~--~p~~~ 115 (166)
T 1a17_A 79 KYIKGYYRRAASNMALGKFRAALRDYETVVKV--KPHDK 115 (166)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--STTCH
T ss_pred ccHHHHHHHHHHHHHhccHHHHHHHHHHHHHh--CCCCH
Confidence 46778999999999999999999999999875 45433
No 54
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=96.85 E-value=0.0054 Score=53.95 Aligned_cols=103 Identities=11% Similarity=0.015 Sum_probs=78.2
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcC-----C-CCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccc
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRS-----G-GVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLV 143 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~-----G-g~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi 143 (566)
..+-..+...|++++|.+.|.+..+.. . ......+|+.+-..+.+.|+.++|.+.|++.....-.
T Consensus 89 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~--------- 159 (283)
T 3edt_B 89 NNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYAT--------- 159 (283)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH---------
Confidence 455677889999999999999886320 1 1234677899999999999999999999998764100
Q ss_pred cccccCCC-ChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 144 DRWKWSRP-DVSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 144 ~~~rw~~P-DVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
......| +..+|+.|-..+.+.|+.++|+++|++..+.
T Consensus 160 -~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 160 -RLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp -HSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred -hcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 0000013 4678999999999999999999999998764
No 55
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=96.83 E-value=0.0093 Score=54.35 Aligned_cols=93 Identities=10% Similarity=-0.042 Sum_probs=79.3
Q ss_pred HHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCC
Q 047498 72 LLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRP 151 (566)
Q Consensus 72 LIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~P 151 (566)
+-..+.+.|++++|++.|++..+. ..-+...|..+-..+.+.|+.++|++.|+++..... -
T Consensus 9 ~~~~~~~~g~~~~A~~~~~~~l~~--~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-----------------~ 69 (359)
T 3ieg_A 9 LGKKLLAAGQLADALSQFHAAVDG--DPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKM-----------------D 69 (359)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT-----------------T
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhh--CcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-----------------C
Confidence 345678899999999999999752 223577899999999999999999999999987632 3
Q ss_pred ChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCC
Q 047498 152 DVSVYTSLVQSLAASLKVSDALRLIDDISRVG 183 (566)
Q Consensus 152 DVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rG 183 (566)
+...|..+-..+.+.|+.++|++.|++..+..
T Consensus 70 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~ 101 (359)
T 3ieg_A 70 FTAARLQRGHLLLKQGKLDEAEDDFKKVLKSN 101 (359)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSC
T ss_pred cchHHHHHHHHHHHcCChHHHHHHHHHHHhcC
Confidence 67889999999999999999999999998753
No 56
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=96.79 E-value=0.0033 Score=60.98 Aligned_cols=108 Identities=14% Similarity=0.011 Sum_probs=83.3
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWS 149 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~ 149 (566)
..+-..+.+.|++++|.+.|.+..+.. |+...|..+...+.+.|+.++|++.|+++.....
T Consensus 241 ~~~~~~~~~~~~~~~A~~~~~~~l~~~---~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~---------------- 301 (514)
T 2gw1_A 241 EHTGIFKFLKNDPLGAHEDIKKAIELF---PRVNSYIYMALIMADRNDSTEYYNYFDKALKLDS---------------- 301 (514)
T ss_dssp HHHHHHHHHSSCHHHHHHHHHHHHHHC---CCHHHHHHHHHHHHTSSCCTTGGGHHHHHHTTCT----------------
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhhC---ccHHHHHHHHHHHHHCCCHHHHHHHHHHHhhcCc----------------
Confidence 355667888999999999999997532 4478899999999999999999999999986532
Q ss_pred CCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceeccc
Q 047498 150 RPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVRCP 199 (566)
Q Consensus 150 ~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~C~ 199 (566)
.+...|..+...+.+.|+.++|++.|++.... .|++...|..+..++
T Consensus 302 -~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~l~~~~ 348 (514)
T 2gw1_A 302 -NNSSVYYHRGQMNFILQNYDQAGKDFDKAKEL--DPENIFPYIQLACLA 348 (514)
T ss_dssp -TCTHHHHHHHHHHHHTTCTTHHHHHHHHHHHT--CSSCSHHHHHHHHHT
T ss_pred -CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh--ChhhHHHHHHHHHHH
Confidence 35667778888888888888888888887764 454455555555543
No 57
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=96.73 E-value=0.013 Score=53.39 Aligned_cols=91 Identities=10% Similarity=0.020 Sum_probs=79.1
Q ss_pred HHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCC
Q 047498 73 LSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPD 152 (566)
Q Consensus 73 IrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PD 152 (566)
-..+...|++++|++.|++..+. ..-+...|..+-..+.+.|+.++|++.|+++..... .+
T Consensus 127 a~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~-----------------~~ 187 (359)
T 3ieg_A 127 ALDAFDGADYTAAITFLDKILEV--CVWDAELRELRAECFIKEGEPRKAISDLKAASKLKS-----------------DN 187 (359)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCS-----------------CC
T ss_pred HHHHHHccCHHHHHHHHHHHHHh--CCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC-----------------CC
Confidence 46788899999999999999752 224667899999999999999999999999986532 47
Q ss_pred hHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 153 VSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 153 VVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
..+|..+...+.+.|+.++|.+.|++..+.
T Consensus 188 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 217 (359)
T 3ieg_A 188 TEAFYKISTLYYQLGDHELSLSEVRECLKL 217 (359)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 789999999999999999999999999874
No 58
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=96.72 E-value=0.0071 Score=54.31 Aligned_cols=103 Identities=9% Similarity=0.001 Sum_probs=77.7
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcC-----CC-CcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccc
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRS-----GG-VLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLV 143 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~-----Gg-~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi 143 (566)
..+-..+...|++++|.+.|.+..+.. +. .-....|+.+-..+.+.|+.++|+++|+++....-+
T Consensus 115 ~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~--------- 185 (311)
T 3nf1_A 115 NNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQT--------- 185 (311)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH---------
Confidence 355667888999999999999886421 12 234566889999999999999999999998764100
Q ss_pred cccccCCC-ChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 144 DRWKWSRP-DVSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 144 ~~~rw~~P-DVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
......| +..+|+.|-..+.+.|+.++|.+.|+++.+.
T Consensus 186 -~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 224 (311)
T 3nf1_A 186 -KLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTR 224 (311)
T ss_dssp -TSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred -HhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 0000013 3568999999999999999999999999864
No 59
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=96.72 E-value=0.0096 Score=52.67 Aligned_cols=91 Identities=8% Similarity=-0.143 Sum_probs=76.7
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCCh
Q 047498 74 SRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDV 153 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDV 153 (566)
..+.+.|++++|.+.|++..... .-|...|..|=.++.+.|+.++|+..|++...... -|.
T Consensus 44 ~~~~~~g~~~eA~~~~~~al~~~--P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P-----------------~~~ 104 (151)
T 3gyz_A 44 YDFYNKGRIEEAEVFFRFLCIYD--FYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGK-----------------NDY 104 (151)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSS-----------------SCC
T ss_pred HHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCC-----------------CCc
Confidence 45678999999999999997532 23567788899999999999999999999986532 356
Q ss_pred HhHHHHHHHHHhcCCHHHHHHHHHHHHhCC
Q 047498 154 SVYTSLVQSLAASLKVSDALRLIDDISRVG 183 (566)
Q Consensus 154 VTYNTLIdGLCKsGRVdEAlkLLeEM~~rG 183 (566)
..|.-+=..|.+.|+.++|++.|+...+..
T Consensus 105 ~~~~~lg~~~~~lg~~~eA~~~~~~al~l~ 134 (151)
T 3gyz_A 105 TPVFHTGQCQLRLKAPLKAKECFELVIQHS 134 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 778889999999999999999999998854
No 60
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=96.71 E-value=0.014 Score=50.08 Aligned_cols=92 Identities=8% Similarity=-0.104 Sum_probs=76.3
Q ss_pred HHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCC
Q 047498 72 LLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRP 151 (566)
Q Consensus 72 LIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~P 151 (566)
+-..+.+.|++++|...|++..... .-|...|..+=..+.+.|+.++|++.|++...... -
T Consensus 27 ~g~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p-----------------~ 87 (148)
T 2vgx_A 27 LAFNQYQSGXYEDAHXVFQALCVLD--HYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDI-----------------X 87 (148)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-----------------T
T ss_pred HHHHHHHcCChHHHHHHHHHHHHcC--cccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC-----------------C
Confidence 4456778999999999999987422 23667788888899999999999999999886532 3
Q ss_pred ChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 152 DVSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 152 DVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
|...|.-+-..|.+.|+.++|++.|+...+.
T Consensus 88 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 88 EPRFPFHAAECLLQXGELAEAESGLFLAQEL 118 (148)
T ss_dssp CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 5677888899999999999999999988764
No 61
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=96.70 E-value=0.0091 Score=53.26 Aligned_cols=107 Identities=7% Similarity=0.014 Sum_probs=80.2
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcC--hhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccc
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLT--VDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWK 147 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PD--vvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~r 147 (566)
..+-..+.+.|++++|++.|.+..+. ...++ ...|..+-..+.+.|+.++|++.|++......
T Consensus 41 ~~l~~~~~~~~~~~~A~~~~~~a~~~-~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~-------------- 105 (272)
T 3u4t_A 41 NRRAVCYYELAKYDLAQKDIETYFSK-VNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDT-------------- 105 (272)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTT-SCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST--------------
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhc-cCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCc--------------
Confidence 44556788899999999999999852 22222 22378899999999999999999999887532
Q ss_pred cCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCccccccee
Q 047498 148 WSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVV 196 (566)
Q Consensus 148 w~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI 196 (566)
-+..+|..+-..+.+.|+.++|++.|++..+. .|++...|..+-
T Consensus 106 ---~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~--~~~~~~~~~~l~ 149 (272)
T 3u4t_A 106 ---TRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRP--TTTDPKVFYELG 149 (272)
T ss_dssp ---TCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCS--SCCCHHHHHHHH
T ss_pred ---ccHHHHHHHHHHHHHccCHHHHHHHHHHHhhc--CCCcHHHHHHHH
Confidence 35567888888888888888888888888765 565544444433
No 62
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=96.65 E-value=0.006 Score=47.00 Aligned_cols=79 Identities=10% Similarity=0.093 Sum_probs=65.0
Q ss_pred hhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 047498 102 VDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISR 181 (566)
Q Consensus 102 vvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~ 181 (566)
...|..+...+.+.|+.++|.++|+++..... .+..+|..+...+.+.|+.++|+++|+++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~-----------------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 71 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDP-----------------NNAEAWYNLGNAYYKQGDYDEAIEYYQKALE 71 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCc-----------------CcHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 56788899999999999999999999987532 4678899999999999999999999999988
Q ss_pred CCCCCCCcccccceeccc
Q 047498 182 VGVSPGEEVPFGKVVRCP 199 (566)
Q Consensus 182 rGcsPdDvVTYntLI~C~ 199 (566)
. .|++..+|..+..++
T Consensus 72 ~--~~~~~~~~~~la~~~ 87 (125)
T 1na0_A 72 L--DPNNAEAWYNLGNAY 87 (125)
T ss_dssp H--CTTCHHHHHHHHHHH
T ss_pred h--CCccHHHHHHHHHHH
Confidence 6 464555555555443
No 63
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=96.64 E-value=0.0045 Score=50.16 Aligned_cols=88 Identities=9% Similarity=-0.037 Sum_probs=68.9
Q ss_pred cCCCHHHHHHHHHHHhhcCC--CCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHh
Q 047498 78 GAKDASEVLEIVAESSKRSG--GVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSV 155 (566)
Q Consensus 78 KAGrlDEAleLL~EM~er~G--g~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVT 155 (566)
..|+.++|++.|++..+. + ..-+...|..|-..+.+.|+.++|++.|++..+... -|...
T Consensus 2 ~~g~~~~A~~~~~~al~~-~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p-----------------~~~~~ 63 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIAS-GLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFP-----------------NHQAL 63 (117)
T ss_dssp -----CCCHHHHHHHHSS-CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------TCHHH
T ss_pred CCCcHHHHHHHHHHHHHc-CCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----------------CchHH
Confidence 468899999999999852 1 122456788899999999999999999999887643 35778
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhCC
Q 047498 156 YTSLVQSLAASLKVSDALRLIDDISRVG 183 (566)
Q Consensus 156 YNTLIdGLCKsGRVdEAlkLLeEM~~rG 183 (566)
|..+-..|.+.|+.++|++.|++.....
T Consensus 64 ~~~l~~~~~~~g~~~~A~~~~~~al~~~ 91 (117)
T 3k9i_A 64 RVFYAMVLYNLGRYEQGVELLLKIIAET 91 (117)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 8889999999999999999999987753
No 64
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=96.60 E-value=0.0064 Score=59.70 Aligned_cols=104 Identities=11% Similarity=-0.001 Sum_probs=74.4
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCCh
Q 047498 74 SRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDV 153 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDV 153 (566)
..+...|++++|.+.|.+..+. .|+...|..+-..+.+.|+.++|++.|+++..... -+.
T Consensus 251 ~~~~~~~~~~~A~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-----------------~~~ 310 (537)
T 3fp2_A 251 IFHFLKNNLLDAQVLLQESINL---HPTPNSYIFLALTLADKENSQEFFKFFQKAVDLNP-----------------EYP 310 (537)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH---CCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCT-----------------TCH
T ss_pred HHHHhcccHHHHHHHHHHHHhc---CCCchHHHHHHHHHHHhcCHHHHHHHHHHHhccCC-----------------CCH
Confidence 4566788999999999988752 25677788888888999999999999998876532 345
Q ss_pred HhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceeccc
Q 047498 154 SVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVRCP 199 (566)
Q Consensus 154 VTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~C~ 199 (566)
.+|..+...+.+.|+.++|++.|++..+. .|++...|..+..++
T Consensus 311 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--~~~~~~~~~~la~~~ 354 (537)
T 3fp2_A 311 PTYYHRGQMYFILQDYKNAKEDFQKAQSL--NPENVYPYIQLACLL 354 (537)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHH
Confidence 56777777777777777777777777664 354445555555443
No 65
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=96.43 E-value=0.019 Score=56.27 Aligned_cols=110 Identities=11% Similarity=-0.090 Sum_probs=67.3
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCcc-cccccc---
Q 047498 71 ELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENG-TLVDRW--- 146 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTY-aLi~~~--- 146 (566)
.+-..+.+.|++++|.+.|.+..+.. .-+..+|..+-..+.+.|+.++|.+.|++....... +...+ .+...+
T Consensus 281 ~l~~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~ 357 (537)
T 3fp2_A 281 FLALTLADKENSQEFFKFFQKAVDLN--PEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPE-NVYPYIQLACLLYKQ 357 (537)
T ss_dssp HHHHHTCCSSCCHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CSHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCHHHHHHHHHHHhccC--CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHc
Confidence 34445566777777777777775321 124556777777777777777777777777654321 11111 000000
Q ss_pred --------------ccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCC
Q 047498 147 --------------KWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRVG 183 (566)
Q Consensus 147 --------------rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rG 183 (566)
....-+...|+.+-..+.+.|+.++|++.|+++.+..
T Consensus 358 g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 408 (537)
T 3fp2_A 358 GKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLE 408 (537)
T ss_dssp TCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcC
Confidence 0012356688888888888899999998888887754
No 66
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=96.38 E-value=0.039 Score=47.73 Aligned_cols=112 Identities=9% Similarity=-0.064 Sum_probs=81.4
Q ss_pred hhHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccc
Q 047498 68 VEEELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWK 147 (566)
Q Consensus 68 ~~~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~r 147 (566)
.-..+-..+.+.|++++|++.|.+..+.. .-+...|+.+-..+.+.|+.++|++.|++.....-.-....|.. .+..
T Consensus 39 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~ 115 (213)
T 1hh8_A 39 ICFNIGCMYTILKNMTEAEKAFTRSINRD--KHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKI-LGLQ 115 (213)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGG-GTBC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhC--ccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHH-hccc
Confidence 33455667889999999999999987532 23567889999999999999999999999887532100001100 0000
Q ss_pred cCCC-ChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCC
Q 047498 148 WSRP-DVSVYTSLVQSLAASLKVSDALRLIDDISRVG 183 (566)
Q Consensus 148 w~~P-DVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rG 183 (566)
. .| +...|..+-..+.+.|+.++|++.|++..+..
T Consensus 116 ~-~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 151 (213)
T 1hh8_A 116 F-KLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMK 151 (213)
T ss_dssp C-EEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred c-CccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcC
Confidence 1 12 34678889999999999999999999998753
No 67
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=96.38 E-value=0.015 Score=52.08 Aligned_cols=110 Identities=13% Similarity=0.068 Sum_probs=85.3
Q ss_pred hhHHHHHH--HHcCCCHHHHHHHHHHHhhcCCCCcC-hhhhHH----------------HHHHHHhcCChhHHHHHHHHH
Q 047498 68 VEEELLSR--VSGAKDASEVLEIVAESSKRSGGVLT-VDECCL----------------IINAAIDRGNTDLALSIFYAM 128 (566)
Q Consensus 68 ~~~aLIrG--LCKAGrlDEAleLL~EM~er~Gg~PD-vvTYNs----------------LI~GlCKaGrVDeAlsLF~EM 128 (566)
.|..+-.| +.+.|++++|++.|++..+. .|+ ...|.. +-..+.+.|+.++|+..|++.
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~---~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 80 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIAL---NIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKEL 80 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHh---CCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 34444444 45799999999999998742 133 344555 788899999999999999998
Q ss_pred HhcCCCCCCCccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceeccc
Q 047498 129 RSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVRCP 199 (566)
Q Consensus 129 ~srG~~PdvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~C~ 199 (566)
.+... -|...|..|-..+.+.|+.++|++.|++..+ ..|++.-.|..+-.++
T Consensus 81 l~~~p-----------------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~--~~P~~~~a~~~lg~~~ 132 (208)
T 3urz_A 81 LQKAP-----------------NNVDCLEACAEMQVCRGQEKDALRMYEKILQ--LEADNLAANIFLGNYY 132 (208)
T ss_dssp HHHCT-----------------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH--HCTTCHHHHHHHHHHH
T ss_pred HHHCC-----------------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--cCCCCHHHHHHHHHHH
Confidence 86632 3678899999999999999999999999988 4687666666655444
No 68
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=96.28 E-value=0.05 Score=46.24 Aligned_cols=96 Identities=10% Similarity=-0.002 Sum_probs=76.2
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWS 149 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~ 149 (566)
..+-..+.+.++.++|.+.+.+.... ..-+...+..+-..+.+.|+.++|++.|++..+...
T Consensus 77 ~~~~~~~~~~~~~~~a~~~~~~a~~~--~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p---------------- 138 (184)
T 3vtx_A 77 YILGSANFMIDEKQAAIDALQRAIAL--NTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKP---------------- 138 (184)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT----------------
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh--CccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcc----------------
Confidence 34445667789999999998887642 123566788888889999999999999998876532
Q ss_pred CCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCC
Q 047498 150 RPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSP 186 (566)
Q Consensus 150 ~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsP 186 (566)
-|..+|..|-..|.+.|+.++|++.|++..+. .|
T Consensus 139 -~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--~p 172 (184)
T 3vtx_A 139 -GFIRAYQSIGLAYEGKGLRDEAVKYFKKALEK--EE 172 (184)
T ss_dssp -TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT--TH
T ss_pred -hhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhC--Cc
Confidence 36778999999999999999999999998774 45
No 69
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=96.27 E-value=0.00062 Score=72.44 Aligned_cols=101 Identities=12% Similarity=0.051 Sum_probs=9.3
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCcc-cccccc--
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENG-TLVDRW-- 146 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTY-aLi~~~-- 146 (566)
..|...+.+.|++++|.+.|.+. +|..+|..++++++..|+.++|++.|+..++. . ++..++ .++.++
T Consensus 36 s~La~A~l~~g~~~eAIdsfika-------~D~~~y~~V~~~ae~~g~~EeAi~yl~~ark~-~-~~~~i~~~Li~~Y~K 106 (449)
T 1b89_A 36 SQLAKAQLQKGMVKEAIDSYIKA-------DDPSSYMEVVQAANTSGNWEELVKYLQMARKK-A-RESYVETELIFALAK 106 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHcCCHHHHHHHHHcC-------CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHh-C-ccchhHHHHHHHHHH
Confidence 46778888889999998888653 36668888899999999999999966555543 2 111111 111111
Q ss_pred --cc-------CCCChHhHHHHHHHHHhcCCHHHHHHHHHHH
Q 047498 147 --KW-------SRPDVSVYTSLVQSLAASLKVSDALRLIDDI 179 (566)
Q Consensus 147 --rw-------~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM 179 (566)
+| -.||..+|+.+-+.|...|++++|+.+|..+
T Consensus 107 lg~l~e~e~f~~~pn~~a~~~IGd~~~~~g~yeeA~~~Y~~a 148 (449)
T 1b89_A 107 TNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNV 148 (449)
T ss_dssp --CHHHHTTTTTCC----------------CTTTHHHHHHHT
T ss_pred hCCHHHHHHHHcCCcHHHHHHHHHHHHHcCCHHHHHHHHHHh
Confidence 00 1466666666666666666666666666655
No 70
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=96.27 E-value=0.021 Score=47.44 Aligned_cols=90 Identities=11% Similarity=0.012 Sum_probs=74.4
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCCh
Q 047498 74 SRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDV 153 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDV 153 (566)
..+.+.|++++|...|++..+.. .-+...|..+=..+.+.|+.++|+..|++...... -+.
T Consensus 25 ~~~~~~g~~~~A~~~~~~al~~~--P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P-----------------~~~ 85 (121)
T 1hxi_A 25 LSMLKLANLAEAALAFEAVCQKE--PEREEAWRSLGLTQAENEKDGLAIIALNHARMLDP-----------------KDI 85 (121)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------TCH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----------------CCH
Confidence 45778999999999999997532 12566778888899999999999999999876532 256
Q ss_pred HhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 154 SVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 154 VTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
..|..|-..+.+.|+.++|++.|++..+.
T Consensus 86 ~~~~~la~~~~~~g~~~~A~~~~~~al~~ 114 (121)
T 1hxi_A 86 AVHAALAVSHTNEHNANAALASLRAWLLS 114 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 78889999999999999999999998763
No 71
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=96.16 E-value=0.027 Score=46.17 Aligned_cols=93 Identities=6% Similarity=-0.097 Sum_probs=70.9
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWS 149 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~ 149 (566)
..+-..+.+.|++++|.+.|.+..+. ..-+...|..+-..+.+.|+.++|++.|++......
T Consensus 51 ~~~a~~~~~~~~~~~A~~~~~~a~~~--~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p---------------- 112 (166)
T 1a17_A 51 GNRSLAYLRTECYGYALGDATRAIEL--DKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKP---------------- 112 (166)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST----------------
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh--CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC----------------
Confidence 34555677899999999999998752 223567788899999999999999999999886643
Q ss_pred CCChHhHHH--HHHHHHhcCCHHHHHHHHHHHHh
Q 047498 150 RPDVSVYTS--LVQSLAASLKVSDALRLIDDISR 181 (566)
Q Consensus 150 ~PDVVTYNT--LIdGLCKsGRVdEAlkLLeEM~~ 181 (566)
-|...+.. +...+.+.|+.++|++.++....
T Consensus 113 -~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~ 145 (166)
T 1a17_A 113 -HDKDAKMKYQECNKIVKQKAFERAIAGDEHKRS 145 (166)
T ss_dssp -TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHHHHHcccchHH
Confidence 23334433 44447788999999999987644
No 72
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=96.14 E-value=0.05 Score=48.04 Aligned_cols=94 Identities=12% Similarity=-0.028 Sum_probs=77.1
Q ss_pred HHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChH
Q 047498 75 RVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVS 154 (566)
Q Consensus 75 GLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVV 154 (566)
.+.+.|++++|++.|.+..+. ...+|...|.-+-..+.+.|+.++|++.|++...... -+..
T Consensus 16 ~~~~~~~~~~A~~~~~~al~~-~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p-----------------~~~~ 77 (228)
T 4i17_A 16 DALNAKNYAVAFEKYSEYLKL-TNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNY-----------------NLAN 77 (228)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH-TTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC-----------------SHHH
T ss_pred HHHHccCHHHHHHHHHHHHhc-cCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCc-----------------chHH
Confidence 466799999999999998752 2225667777799999999999999999999886532 3567
Q ss_pred hHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCC
Q 047498 155 VYTSLVQSLAASLKVSDALRLIDDISRVGVSPGE 188 (566)
Q Consensus 155 TYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdD 188 (566)
.|..+-..+.+.|+.++|++.|++..+. .|++
T Consensus 78 ~~~~l~~~~~~~~~~~~A~~~~~~al~~--~p~~ 109 (228)
T 4i17_A 78 AYIGKSAAYRDMKNNQEYIATLTEGIKA--VPGN 109 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH--STTC
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHH--CCCc
Confidence 8999999999999999999999999874 4643
No 73
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=96.09 E-value=0.041 Score=49.51 Aligned_cols=103 Identities=15% Similarity=0.092 Sum_probs=82.9
Q ss_pred HHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCC
Q 047498 72 LLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRP 151 (566)
Q Consensus 72 LIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~P 151 (566)
+=..+.+.|++++|...|++..+. ..-+...|..+-..+.+.|+.++|+..|++..+... -
T Consensus 11 lg~~~~~~g~~~~A~~~~~~al~~--~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P-----------------~ 71 (217)
T 2pl2_A 11 LGVQLYALGRYDAALTLFERALKE--NPQDPEALYWLARTQLKLGLVNPALENGKTLVARTP-----------------R 71 (217)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTT--SSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------T
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----------------C
Confidence 344577899999999999999742 224667889999999999999999999999886532 3
Q ss_pred ChHhHHHHHHHHHhc-----------CCHHHHHHHHHHHHhCCCCCCCcccccce
Q 047498 152 DVSVYTSLVQSLAAS-----------LKVSDALRLIDDISRVGVSPGEEVPFGKV 195 (566)
Q Consensus 152 DVVTYNTLIdGLCKs-----------GRVdEAlkLLeEM~~rGcsPdDvVTYntL 195 (566)
|...|..|-..+.+. |+.++|++.|++..+. .|++...|..+
T Consensus 72 ~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~--~P~~~~~~~~l 124 (217)
T 2pl2_A 72 YLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERV--NPRYAPLHLQR 124 (217)
T ss_dssp CHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH--CTTCHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHh--CcccHHHHHHH
Confidence 567888888899999 9999999999999874 67655555433
No 74
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=96.06 E-value=0.0021 Score=68.43 Aligned_cols=37 Identities=11% Similarity=0.050 Sum_probs=28.1
Q ss_pred hHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceecc
Q 047498 155 VYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVRC 198 (566)
Q Consensus 155 TYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~C 198 (566)
.|+-|.+.|++.|++++|.+.+..+ ++..||..++.+
T Consensus 150 n~~~LA~~L~~Lg~yq~AVea~~KA-------~~~~~Wk~v~~a 186 (449)
T 1b89_A 150 NFGRLASTLVHLGEYQAAVDGARKA-------NSTRTWKEVCFA 186 (449)
T ss_dssp CHHHHHHHHHTTTCHHHHHHHHHHH-------TCHHHHHHHHHH
T ss_pred hHHHHHHHHHHhccHHHHHHHHHHc-------CCchhHHHHHHH
Confidence 5888888888888888888888887 244677776654
No 75
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=96.02 E-value=0.05 Score=46.28 Aligned_cols=95 Identities=7% Similarity=-0.020 Sum_probs=76.1
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHH-HHhcCCh--hHHHHHHHHHHhcCCCCCCCcccccccc
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINA-AIDRGNT--DLALSIFYAMRSSFDQGLSENGTLVDRW 146 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~G-lCKaGrV--DeAlsLF~EM~srG~~PdvvTYaLi~~~ 146 (566)
..+-..+...|++++|.+.|++..+.. .-+...|..+-.. +.+.|+. ++|.+.|++......
T Consensus 48 ~~lg~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p------------- 112 (177)
T 2e2e_A 48 ALLGEYYLWQNDYSNSLLAYRQALQLR--GENAELYAALATVLYYQASQHMTAQTRAMIDKALALDS------------- 112 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHH--CSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCT-------------
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCC-------------
Confidence 345566778999999999999987421 1255667777777 6789998 999999999887632
Q ss_pred ccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCC
Q 047498 147 KWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRVG 183 (566)
Q Consensus 147 rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rG 183 (566)
-+...|..+-..+.+.|+.++|++.|++..+..
T Consensus 113 ----~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 145 (177)
T 2e2e_A 113 ----NEITALMLLASDAFMQANYAQAIELWQKVMDLN 145 (177)
T ss_dssp ----TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred ----CcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhC
Confidence 356788889999999999999999999998753
No 76
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=95.99 E-value=0.033 Score=47.68 Aligned_cols=100 Identities=10% Similarity=0.050 Sum_probs=77.0
Q ss_pred HHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCC
Q 047498 72 LLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRP 151 (566)
Q Consensus 72 LIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~P 151 (566)
|=+-|.+.|++++|.+.|++..+.. .=+..+|+.+=..+.+.|+.++|+..|++..+.. |
T Consensus 37 la~~y~~~~~~~~A~~~~~~al~~~--p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~------------------p 96 (150)
T 4ga2_A 37 FAKLYYEAKEYDLAKKYICTYINVQ--ERDPKAHRFLGLLYELEENTDKAVECYRRSVELN------------------P 96 (150)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------------------T
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhC------------------C
Confidence 3455778999999999999987422 1256788999999999999999999999987653 5
Q ss_pred -ChHhHHHHHHHHHhcCCHHHHHHH-HHHHHhCCCCCCCccccc
Q 047498 152 -DVSVYTSLVQSLAASLKVSDALRL-IDDISRVGVSPGEEVPFG 193 (566)
Q Consensus 152 -DVVTYNTLIdGLCKsGRVdEAlkL-LeEM~~rGcsPdDvVTYn 193 (566)
|...|..|-..|.+.|+.++|.+. +++..+ +.|++...|+
T Consensus 97 ~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~--l~P~~~~~~~ 138 (150)
T 4ga2_A 97 TQKDLVLKIAELLCKNDVTDGRAKYWVERAAK--LFPGSPAVYK 138 (150)
T ss_dssp TCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHH--HSTTCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHH--hCcCCHHHHH
Confidence 567888899999999999887765 466655 4676544443
No 77
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=95.87 E-value=0.024 Score=51.08 Aligned_cols=86 Identities=12% Similarity=0.002 Sum_probs=56.4
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCCh
Q 047498 74 SRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDV 153 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDV 153 (566)
..+...|+.++|++.|++..+. . .+...+..+-..+.+.|+.++|+..|++...... -|.
T Consensus 126 ~~~~~~g~~~~A~~~~~~al~~-~--~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P-----------------~~~ 185 (217)
T 2pl2_A 126 LVYALLGERDKAEASLKQALAL-E--DTPEIRSALAELYLSMGRLDEALAQYAKALEQAP-----------------KDL 185 (217)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH-C--CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHST-----------------TCH
T ss_pred HHHHHcCChHHHHHHHHHHHhc-c--cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----------------CCh
Confidence 4566788888888888888753 2 4667788888888888888888888888876532 367
Q ss_pred HhHHHHHHHHHhcCCHHHHHHHHHHH
Q 047498 154 SVYTSLVQSLAASLKVSDALRLIDDI 179 (566)
Q Consensus 154 VTYNTLIdGLCKsGRVdEAlkLLeEM 179 (566)
..|..|-..+.+.|+.++|++.|++.
T Consensus 186 ~~~~~la~~~~~~g~~~~A~~~~~~~ 211 (217)
T 2pl2_A 186 DLRVRYASALLLKGKAEEAARAAALE 211 (217)
T ss_dssp HHHHHHHHHHTC--------------
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 78888999999999999999988754
No 78
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=95.83 E-value=0.061 Score=42.88 Aligned_cols=81 Identities=11% Similarity=-0.043 Sum_probs=64.3
Q ss_pred HHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHHHHHHH
Q 047498 83 SEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQS 162 (566)
Q Consensus 83 DEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYNTLIdG 162 (566)
++|++.|++..+. ..-+...|..+-..+.+.|+.++|++.|++...... -+...|..|-..
T Consensus 2 ~~a~~~~~~al~~--~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p-----------------~~~~~~~~la~~ 62 (115)
T 2kat_A 2 QAITERLEAMLAQ--GTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDP-----------------TYSVAWKWLGKT 62 (115)
T ss_dssp CCHHHHHHHHHTT--TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------TCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHh--CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCC-----------------CcHHHHHHHHHH
Confidence 3567778877642 223567788888999999999999999999876532 356788889999
Q ss_pred HHhcCCHHHHHHHHHHHHhC
Q 047498 163 LAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 163 LCKsGRVdEAlkLLeEM~~r 182 (566)
+.+.|+.++|++.|++..+.
T Consensus 63 ~~~~g~~~~A~~~~~~al~~ 82 (115)
T 2kat_A 63 LQGQGDRAGARQAWESGLAA 82 (115)
T ss_dssp HHHHTCHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHh
Confidence 99999999999999988764
No 79
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=95.82 E-value=0.12 Score=45.13 Aligned_cols=104 Identities=7% Similarity=-0.126 Sum_probs=80.2
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcCCCCcC--------------hhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCc
Q 047498 74 SRVSGAKDASEVLEIVAESSKRSGGVLT--------------VDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSEN 139 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~Gg~PD--------------vvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvT 139 (566)
..+.+.|++++|++.|.+..+.....|+ ...|.-+-.++.+.|+.++|++.|++......
T Consensus 46 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p------ 119 (198)
T 2fbn_A 46 NEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDK------ 119 (198)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST------
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc------
Confidence 4567899999999999998742111221 26788888899999999999999999886532
Q ss_pred cccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCccccccee
Q 047498 140 GTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVV 196 (566)
Q Consensus 140 YaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI 196 (566)
.+...|..+-..+.+.|+.++|++.|++..+. .|++.-.+..+-
T Consensus 120 -----------~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~l~ 163 (198)
T 2fbn_A 120 -----------NNVKALYKLGVANMYFGFLEEAKENLYKAASL--NPNNLDIRNSYE 163 (198)
T ss_dssp -----------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--STTCHHHHHHHH
T ss_pred -----------ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHH--CCCcHHHHHHHH
Confidence 46788999999999999999999999998875 565444444333
No 80
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=95.80 E-value=0.045 Score=46.33 Aligned_cols=96 Identities=11% Similarity=0.068 Sum_probs=76.6
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcC-------C---------CCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCC
Q 047498 74 SRVSGAKDASEVLEIVAESSKRS-------G---------GVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLS 137 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~-------G---------g~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~Pdv 137 (566)
+.+.+.|++++|++.|.+..... . ..-+...|+-+-.+|.+.|+.++|+..|++......
T Consensus 19 ~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p---- 94 (162)
T 3rkv_A 19 NELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREE---- 94 (162)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHST----
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCC----
Confidence 45778999999999998876310 0 011345788889999999999999999999876532
Q ss_pred CccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCC
Q 047498 138 ENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGE 188 (566)
Q Consensus 138 vTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdD 188 (566)
-+...|.-+-..|.+.|+.++|++.|++..+. .|++
T Consensus 95 -------------~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l--~p~~ 130 (162)
T 3rkv_A 95 -------------TNEKALFRRAKARIAAWKLDEAEEDLKLLLRN--HPAA 130 (162)
T ss_dssp -------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CGGG
T ss_pred -------------cchHHHHHHHHHHHHHhcHHHHHHHHHHHHhc--CCCC
Confidence 46788999999999999999999999998775 5743
No 81
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=95.60 E-value=0.065 Score=54.31 Aligned_cols=119 Identities=14% Similarity=0.059 Sum_probs=81.4
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhhcCCC-CcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCC------CCCccccc
Q 047498 71 ELLSRVSGAKDASEVLEIVAESSKRSGG-VLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQG------LSENGTLV 143 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~er~Gg-~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~P------dvvTYaLi 143 (566)
.+-..+...|+.++|++++.+..+ .+. .=+...+-.++..+.+.|++|+|.+.|++|.+. .| |..-.-+.
T Consensus 105 ~la~i~~~~g~~eeAL~~l~~~i~-~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~--~~d~~~~~d~~l~~La 181 (310)
T 3mv2_B 105 LLATAQAILGDLDKSLETCVEGID-NDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNA--IEDTVSGDNEMILNLA 181 (310)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHT-SSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHhc-cCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--CccccccchHHHHHHH
Confidence 455677888999999999998853 221 126677788999999999999999999999765 33 11111111
Q ss_pred ccc--------cc------------CCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC--------CCCCCCcccc
Q 047498 144 DRW--------KW------------SRPDVSVYTSLVQSLAASLKVSDALRLIDDISRV--------GVSPGEEVPF 192 (566)
Q Consensus 144 ~~~--------rw------------~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r--------GcsPdDvVTY 192 (566)
.+| +. -.|+..+...|.+.+-+.|++++|.+.++.+.+. ++.|+|.-+.
T Consensus 182 ea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~L 258 (310)
T 3mv2_B 182 ESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLNLHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFL 258 (310)
T ss_dssp HHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHHHHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHH
T ss_pred HHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHHHHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHH
Confidence 111 00 1477666777778888999999999999877653 1247665555
No 82
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=95.48 E-value=0.11 Score=44.12 Aligned_cols=120 Identities=10% Similarity=0.017 Sum_probs=81.3
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCc-ccccc-------c
Q 047498 74 SRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSEN-GTLVD-------R 145 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvT-YaLi~-------~ 145 (566)
+.+.+.|++++|++.|++..+.. .=+..+|..+-..+.+.|+.++|++.|+........ ... +.... .
T Consensus 13 ~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 88 (184)
T 3vtx_A 13 DKKRTKGDFDGAIRAYKKVLKAD--PNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTT--SAEAYYILGSANFMIDE 88 (184)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCch--hHHHHHHHHHHHHHcCC
Confidence 44667888999988888876421 125567788888888889999998888887655332 110 00000 0
Q ss_pred c-----------ccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceeccc
Q 047498 146 W-----------KWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVRCP 199 (566)
Q Consensus 146 ~-----------rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~C~ 199 (566)
+ ....-|...|..+-..+.+.|+.++|++.|++..+. .|++.-.|..+-.++
T Consensus 89 ~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~--~p~~~~~~~~lg~~~ 151 (184)
T 3vtx_A 89 KQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISI--KPGFIRAYQSIGLAY 151 (184)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHh--cchhhhHHHHHHHHH
Confidence 0 112346778888999999999999999999998874 576555555554444
No 83
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=95.43 E-value=0.056 Score=45.09 Aligned_cols=94 Identities=6% Similarity=-0.079 Sum_probs=71.9
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCC-
Q 047498 74 SRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPD- 152 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PD- 152 (566)
+.+.+.|++++|++.|.+..+.. .-+...|+-+=..|.+.|+.++|++.|++....... . .++
T Consensus 16 ~~~~~~~~~~~A~~~y~~Al~~~--p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~--~------------~~~~ 79 (127)
T 4gcn_A 16 NAAYKQKDFEKAHVHYDKAIELD--PSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRE--T------------RADY 79 (127)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--T------------TCCH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcc--c------------chhh
Confidence 45788999999999999987521 235677888999999999999999999987653210 0 011
Q ss_pred ---hHhHHHHHHHHHhcCCHHHHHHHHHHHHhCC
Q 047498 153 ---VSVYTSLVQSLAASLKVSDALRLIDDISRVG 183 (566)
Q Consensus 153 ---VVTYNTLIdGLCKsGRVdEAlkLLeEM~~rG 183 (566)
..+|.-+=+.+-+.|++++|++.|++-....
T Consensus 80 ~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~ 113 (127)
T 4gcn_A 80 KLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEF 113 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 2357777778889999999999999877643
No 84
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=95.43 E-value=0.092 Score=49.64 Aligned_cols=104 Identities=12% Similarity=-0.001 Sum_probs=82.8
Q ss_pred HHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCC
Q 047498 73 LSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPD 152 (566)
Q Consensus 73 IrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PD 152 (566)
-..+.+.|++++|.+.|++..+.. .-+...|+.+-..+.+.|+.++|++.|++...... -|
T Consensus 11 g~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p-----------------~~ 71 (281)
T 2c2l_A 11 GNRLFVGRKYPEAAACYGRAITRN--PLVAVYYTNRALCYLKMQQPEQALADCRRALELDG-----------------QS 71 (281)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHC--SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCT-----------------TC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhC--CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC-----------------CC
Confidence 355778999999999999987522 12677889999999999999999999998875422 36
Q ss_pred hHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceec
Q 047498 153 VSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVR 197 (566)
Q Consensus 153 VVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~ 197 (566)
...|+.+-..|.+.|+.++|++.|++..+. .|++...|+..+.
T Consensus 72 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l--~p~~~~~~~~~~~ 114 (281)
T 2c2l_A 72 VKAHFFLGQCQLEMESYDEAIANLQRAYSL--AKEQRLNFGDDIP 114 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--HHHTTCCCCSHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CccchhhHHHHHH
Confidence 778999999999999999999999998774 3544455655543
No 85
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=95.40 E-value=0.034 Score=49.10 Aligned_cols=112 Identities=13% Similarity=0.105 Sum_probs=81.8
Q ss_pred cccccccchhHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCc
Q 047498 60 LSESENGVVEEELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSEN 139 (566)
Q Consensus 60 ~~~~~~~~~~~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvT 139 (566)
++....+++++.|.+.+-..+.+++++++-- -+...+..+=..+.+.|+.++|.+.|++......
T Consensus 3 ~~~~~~~~~~~~l~~~~~~~~~l~~al~l~p---------~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P------ 67 (151)
T 3gyz_A 3 LNITENESISTAVIDAINSGATLKDINAIPD---------DMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDF------ 67 (151)
T ss_dssp ------CHHHHHHHHHHHTSCCTGGGCCSCH---------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------
T ss_pred CcHHHHHHHHHHHHHHHHCCCCHHHHhCCCH---------HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------
Confidence 4445667788888888887777766654321 1334577777889999999999999999886632
Q ss_pred cccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceeccc
Q 047498 140 GTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVRCP 199 (566)
Q Consensus 140 YaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~C~ 199 (566)
-|...|..|=..|.+.|+.++|++.|++..+ +.|++...|..+=.|+
T Consensus 68 -----------~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~--l~P~~~~~~~~lg~~~ 114 (151)
T 3gyz_A 68 -----------YNVDYIMGLAAIYQIKEQFQQAADLYAVAFA--LGKNDYTPVFHTGQCQ 114 (151)
T ss_dssp -----------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HSSSCCHHHHHHHHHH
T ss_pred -----------CCHHHHHHHHHHHHHHccHHHHHHHHHHHHh--hCCCCcHHHHHHHHHH
Confidence 3677888899999999999999999999988 4576666665554454
No 86
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=95.36 E-value=0.16 Score=47.35 Aligned_cols=95 Identities=8% Similarity=0.045 Sum_probs=73.5
Q ss_pred HHHHHHcCCCHHHHHHHHHHHhhcCCCCcCh----hhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccc
Q 047498 72 LLSRVSGAKDASEVLEIVAESSKRSGGVLTV----DECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWK 147 (566)
Q Consensus 72 LIrGLCKAGrlDEAleLL~EM~er~Gg~PDv----vTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~r 147 (566)
.+..+++.|++++|.+++.+..+.....|+. ..|+.+-..+.+.|+.++|++.|++.......
T Consensus 81 ~i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~------------- 147 (293)
T 3u3w_A 81 QVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLT------------- 147 (293)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCC-------------
T ss_pred HHHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcc-------------
Confidence 3678999999999999999987532223442 23445667777888999999999998874332
Q ss_pred cCCCC----hHhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 047498 148 WSRPD----VSVYTSLVQSLAASLKVSDALRLIDDISR 181 (566)
Q Consensus 148 w~~PD----VVTYNTLIdGLCKsGRVdEAlkLLeEM~~ 181 (566)
.+| +.+|+.|-..+.+.|+.++|++.|++..+
T Consensus 148 --~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~ 183 (293)
T 3u3w_A 148 --GIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILK 183 (293)
T ss_dssp --CSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred --cccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 233 34699999999999999999999999874
No 87
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=95.26 E-value=0.086 Score=49.71 Aligned_cols=85 Identities=9% Similarity=0.013 Sum_probs=62.4
Q ss_pred cCCCH-------HHHHHHHHHHhhcCCCCc-ChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccC
Q 047498 78 GAKDA-------SEVLEIVAESSKRSGGVL-TVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWS 149 (566)
Q Consensus 78 KAGrl-------DEAleLL~EM~er~Gg~P-DvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~ 149 (566)
+.|+. ++|...|++-.+ ...| +...|..+...+.+.|+.++|.++|++..+.
T Consensus 69 ~~g~~~~~~~~~~~A~~~~~rAl~--~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~------------------ 128 (308)
T 2ond_A 69 EKGDMNNAKLFSDEAANIYERAIS--TLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAI------------------ 128 (308)
T ss_dssp HTSCCHHHHHHHHHHHHHHHHHHT--TTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS------------------
T ss_pred hccchhhcccchHHHHHHHHHHHH--HhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc------------------
Confidence 46775 888888888873 1224 3447788888888888888888888888753
Q ss_pred CCC-hH-hHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 150 RPD-VS-VYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 150 ~PD-VV-TYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
.|+ .. .|+.+..-+.+.|++++|+++|++.++.
T Consensus 129 ~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~ 163 (308)
T 2ond_A 129 EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKARED 163 (308)
T ss_dssp SSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTS
T ss_pred cccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 243 22 6777888888888888888888887764
No 88
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=95.24 E-value=0.067 Score=47.76 Aligned_cols=98 Identities=10% Similarity=-0.045 Sum_probs=73.3
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcCCCCcC--hhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCC
Q 047498 74 SRVSGAKDASEVLEIVAESSKRSGGVLT--VDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRP 151 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~Gg~PD--vvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~P 151 (566)
..+.+.|++++|...|++..+.....+. ...|+.+-..+...|+.++|++.|++.....-. .....-
T Consensus 13 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-----------~~~~~~ 81 (338)
T 3ro2_A 13 ERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLART-----------IGDQLG 81 (338)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----------HTCHHH
T ss_pred HHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhc-----------ccccHH
Confidence 3567799999999999999753211111 467889999999999999999999987543110 000012
Q ss_pred ChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 152 DVSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 152 DVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
...+|..+-..+.+.|+.++|.+.+++..+.
T Consensus 82 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 112 (338)
T 3ro2_A 82 EAKASGNLGNTLKVLGNFDEAIVCCQRHLDI 112 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 3678899999999999999999999987653
No 89
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=95.19 E-value=0.12 Score=50.39 Aligned_cols=105 Identities=6% Similarity=-0.106 Sum_probs=84.4
Q ss_pred HHHHHHcCCCHHHHHHHHHHHhhcCCCCcC----------------hhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCC
Q 047498 72 LLSRVSGAKDASEVLEIVAESSKRSGGVLT----------------VDECCLIINAAIDRGNTDLALSIFYAMRSSFDQG 135 (566)
Q Consensus 72 LIrGLCKAGrlDEAleLL~EM~er~Gg~PD----------------vvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~P 135 (566)
+=..+.+.|++++|++.|++..+.. |+ ...|+-+-.+|.+.|+.++|++.|++......
T Consensus 153 ~g~~~~~~g~~~~A~~~y~~Al~~~---p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p-- 227 (336)
T 1p5q_A 153 RGTVYFKEGKYKQALLQYKKIVSWL---EYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDS-- 227 (336)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHT---TTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHh---hccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--
Confidence 3356778999999999999987422 33 47899999999999999999999999886532
Q ss_pred CCCccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceecc
Q 047498 136 LSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVRC 198 (566)
Q Consensus 136 dvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~C 198 (566)
-|...|.-+-..|.+.|+.++|++.|++..+. .|++.-.|..+-.+
T Consensus 228 ---------------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l--~P~~~~a~~~l~~~ 273 (336)
T 1p5q_A 228 ---------------NNEKGLSRRGEAHLAVNDFELARADFQKVLQL--YPNNKAAKTQLAVC 273 (336)
T ss_dssp ---------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CSSCHHHHHHHHHH
T ss_pred ---------------CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH--CCCCHHHHHHHHHH
Confidence 47888999999999999999999999999874 67555445444433
No 90
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=95.13 E-value=0.052 Score=48.43 Aligned_cols=98 Identities=9% Similarity=-0.063 Sum_probs=49.6
Q ss_pred HHHHHcCCCHHHHHHHHHHHhhc---CCC-CcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCcccccccccc
Q 047498 73 LSRVSGAKDASEVLEIVAESSKR---SGG-VLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKW 148 (566)
Q Consensus 73 IrGLCKAGrlDEAleLL~EM~er---~Gg-~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw 148 (566)
-..+.+.|+.++|.+.+.+..+. .+. .....+|+.+-..+.+.|+.++|.+.|++.....-. ...
T Consensus 230 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~-----------~~~ 298 (338)
T 3ro2_A 230 GNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE-----------LKD 298 (338)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----------HTC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh-----------cCC
Confidence 34445556666666665554311 000 001344555555666666666666666555432100 000
Q ss_pred CCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 047498 149 SRPDVSVYTSLVQSLAASLKVSDALRLIDDISR 181 (566)
Q Consensus 149 ~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~ 181 (566)
......+|..|-..+.+.|+.++|.+.+++..+
T Consensus 299 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 331 (338)
T 3ro2_A 299 RIGEGRACWSLGNAYTALGNHDQAMHFAEKHLE 331 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 001144566677777777777777777776654
No 91
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=94.91 E-value=0.11 Score=57.53 Aligned_cols=106 Identities=14% Similarity=0.101 Sum_probs=72.4
Q ss_pred HHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCC-
Q 047498 73 LSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRP- 151 (566)
Q Consensus 73 IrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~P- 151 (566)
=..|.+.|++++|++.|++..+.. .=+...|+-|=..|.+.|+.++|++.|++-.+. .|
T Consensus 50 g~~l~~~g~~~eA~~~~~~Al~l~--P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l------------------~P~ 109 (723)
T 4gyw_A 50 ASVLQQQGKLQEALMHYKEAIRIS--PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQI------------------NPA 109 (723)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------------------CTT
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------------------CCC
Confidence 344556666666666666655321 013445666666666666666666666665543 34
Q ss_pred ChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceeccch
Q 047498 152 DVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVRCPT 200 (566)
Q Consensus 152 DVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~C~t 200 (566)
+...|+-|=..|.+.|+.++|++.|++..+ +.|++.-.|..+..++.
T Consensus 110 ~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~--l~P~~~~a~~~L~~~l~ 156 (723)
T 4gyw_A 110 FADAHSNLASIHKDSGNIPEAIASYRTALK--LKPDFPDAYCNLAHCLQ 156 (723)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HCSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hCCCChHHHhhhhhHHH
Confidence 577899999999999999999999999887 46877777777776553
No 92
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=94.87 E-value=0.22 Score=51.12 Aligned_cols=93 Identities=10% Similarity=0.009 Sum_probs=63.4
Q ss_pred HHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCC
Q 047498 72 LLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRP 151 (566)
Q Consensus 72 LIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~P 151 (566)
+-..+.+.|++++|.+.|++..+.. .-+...|+.+-..+.+.|+.++|.+.|++..... .-
T Consensus 63 lg~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~-----------------p~ 123 (568)
T 2vsy_A 63 LGRVRWTQQRHAEAAVLLQQASDAA--PEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLL-----------------PE 123 (568)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----------------TT
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----------------CC
Confidence 3444556666666666666665321 1234556666666666677777766666665442 13
Q ss_pred ChHhHHHHHHHHHhc---CCHHHHHHHHHHHHhCC
Q 047498 152 DVSVYTSLVQSLAAS---LKVSDALRLIDDISRVG 183 (566)
Q Consensus 152 DVVTYNTLIdGLCKs---GRVdEAlkLLeEM~~rG 183 (566)
|...|..|-..+.+. |+.++|.+.+++..+.+
T Consensus 124 ~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~ 158 (568)
T 2vsy_A 124 EPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQG 158 (568)
T ss_dssp CHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcC
Confidence 577888899999999 99999999999998865
No 93
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=94.85 E-value=0.17 Score=44.61 Aligned_cols=106 Identities=9% Similarity=-0.035 Sum_probs=80.2
Q ss_pred HHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCC
Q 047498 72 LLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRP 151 (566)
Q Consensus 72 LIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~P 151 (566)
+-..+.+.|++++|++.|.+..+.. .-+...|..+-..+.+.|+.++|++.|++....... .|
T Consensus 48 ~~~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~---------------~~ 110 (228)
T 4i17_A 48 CGVCADNIKKYKEAADYFDIAIKKN--YNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPG---------------NA 110 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTT--CSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---------------CH
T ss_pred HHHHHHHhhcHHHHHHHHHHHHHhC--cchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC---------------cH
Confidence 5556778999999999999997521 225667899999999999999999999998865321 11
Q ss_pred Ch-----HhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCC--Cccccccee
Q 047498 152 DV-----SVYTSLVQSLAASLKVSDALRLIDDISRVGVSPG--EEVPFGKVV 196 (566)
Q Consensus 152 DV-----VTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPd--DvVTYntLI 196 (566)
+. ..|..+=..+.+.|+.++|++.|++..+. .|+ +...|..+-
T Consensus 111 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~~~l~ 160 (228)
T 4i17_A 111 TIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDV--TSKKWKTDALYSLG 160 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS--SCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhc--CCCcccHHHHHHHH
Confidence 11 45777777888999999999999999875 674 334444333
No 94
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=94.78 E-value=0.16 Score=38.41 Aligned_cols=66 Identities=14% Similarity=0.046 Sum_probs=56.9
Q ss_pred ChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHH
Q 047498 101 TVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDIS 180 (566)
Q Consensus 101 DvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~ 180 (566)
+...|..+-..+.+.|+.++|+..|++...... .+...|..+-..+.+.|+.++|++.|++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~-----------------~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~ 67 (112)
T 2kck_A 5 NPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDP-----------------EESKYWLMKGKALYNLERYEEAVDCYNYVI 67 (112)
T ss_dssp STTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCC-----------------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCc-----------------CCHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 455688888999999999999999999886542 467788999999999999999999999998
Q ss_pred hCC
Q 047498 181 RVG 183 (566)
Q Consensus 181 ~rG 183 (566)
+..
T Consensus 68 ~~~ 70 (112)
T 2kck_A 68 NVI 70 (112)
T ss_dssp HTS
T ss_pred HhC
Confidence 863
No 95
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=94.67 E-value=0.28 Score=46.18 Aligned_cols=112 Identities=11% Similarity=-0.029 Sum_probs=75.2
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcCh-h-hhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCC-Ccc---ccc
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTV-D-ECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLS-ENG---TLV 143 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDv-v-TYNsLI~GlCKaGrVDeAlsLF~EM~srG~~Pdv-vTY---aLi 143 (566)
..+..-+.+.|++++|.++|++..+ ..|+. . .|+.+...+.+.|+.++|.++|++..... |+. ..| ...
T Consensus 103 ~~~~~~~~~~~~~~~A~~~~~~al~---~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~--p~~~~~~~~~a~~ 177 (308)
T 2ond_A 103 FAYADYEESRMKYEKVHSIYNRLLA---IEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDA--RTRHHVYVTAALM 177 (308)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHT---SSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTST--TCCTHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHh---ccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC--CCCHHHHHHHHHH
Confidence 4566677889999999999999984 23443 2 79999999999999999999999988643 211 111 000
Q ss_pred c----c------------cccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCC-CCC
Q 047498 144 D----R------------WKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRVG-VSP 186 (566)
Q Consensus 144 ~----~------------~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rG-csP 186 (566)
. + .+...-+...|..+++-+.+.|+.++|+.+|++..... +.|
T Consensus 178 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p 237 (308)
T 2ond_A 178 EYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPP 237 (308)
T ss_dssp HHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCG
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCH
Confidence 0 0 00012245666667777777777777777777777663 355
No 96
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=94.53 E-value=0.11 Score=52.95 Aligned_cols=105 Identities=11% Similarity=0.020 Sum_probs=86.0
Q ss_pred HHHHHcCCCH-HHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCC
Q 047498 73 LSRVSGAKDA-SEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRP 151 (566)
Q Consensus 73 IrGLCKAGrl-DEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~P 151 (566)
=..+...|++ ++|.+.|++..+.. .-+...|+.|=..|.+.|+.++|.+.|++.... .|
T Consensus 109 g~~~~~~g~~~~~A~~~~~~al~~~--p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~------------------~p 168 (474)
T 4abn_A 109 GKALNVTPDYSPEAEVLLSKAVKLE--PELVEAWNQLGEVYWKKGDVTSAHTCFSGALTH------------------CK 168 (474)
T ss_dssp HHHHTSSSSCCHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT------------------CC
T ss_pred HHHHHhccccHHHHHHHHHHHHhhC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------------------CC
Confidence 3456779999 99999999987532 124678999999999999999999999998754 48
Q ss_pred ChHhHHHHHHHHHhc---------CCHHHHHHHHHHHHhCCCCCCCcccccceeccc
Q 047498 152 DVSVYTSLVQSLAAS---------LKVSDALRLIDDISRVGVSPGEEVPFGKVVRCP 199 (566)
Q Consensus 152 DVVTYNTLIdGLCKs---------GRVdEAlkLLeEM~~rGcsPdDvVTYntLI~C~ 199 (566)
|...|..|-..|.+. |++++|++.|++..+. .|++...|..+-.++
T Consensus 169 ~~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~lg~~~ 223 (474)
T 4abn_A 169 NKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM--DVLDGRSWYILGNAY 223 (474)
T ss_dssp CHHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH--CTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh--CCCCHHHHHHHHHHH
Confidence 888999999999999 9999999999999885 576666666555544
No 97
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=94.49 E-value=0.13 Score=44.00 Aligned_cols=99 Identities=11% Similarity=0.016 Sum_probs=76.8
Q ss_pred cCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHH
Q 047498 78 GAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYT 157 (566)
Q Consensus 78 KAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYN 157 (566)
..|++|+|++.+..... ...-+...+-.|=..|.+.|+.++|.+.|++..+... =|..+|.
T Consensus 9 ~~~~~e~ai~~~~~a~~--~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p-----------------~~~~a~~ 69 (150)
T 4ga2_A 9 SKADVERYIASVQGSTP--SPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQE-----------------RDPKAHR 69 (150)
T ss_dssp CHHHHHHHHHHHHHHSC--SHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------TCHHHHH
T ss_pred HcChHHHHHHHHHHhcc--cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----------------CCHHHHH
Confidence 45789999999998863 1112344556677889999999999999999886532 3678899
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceec
Q 047498 158 SLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVR 197 (566)
Q Consensus 158 TLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~ 197 (566)
.|=..+.+.|+.++|+..|++..+ +.|++.-.|..+-.
T Consensus 70 ~lg~~~~~~~~~~~A~~~~~~al~--~~p~~~~~~~~la~ 107 (150)
T 4ga2_A 70 FLGLLYELEENTDKAVECYRRSVE--LNPTQKDLVLKIAE 107 (150)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH--HCTTCHHHHHHHHH
T ss_pred HHHHHHHHcCchHHHHHHHHHHHH--hCCCCHHHHHHHHH
Confidence 999999999999999999999987 46766555555443
No 98
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=94.46 E-value=0.19 Score=39.89 Aligned_cols=102 Identities=12% Similarity=-0.078 Sum_probs=72.5
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcC---CC-CcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccc
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRS---GG-VLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDR 145 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~---Gg-~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~ 145 (566)
..+-..+...|++++|.+.+.+..+.. +. ..-...|+.+-..+.+.|+.++|++.|++.....-.
T Consensus 13 ~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~----------- 81 (164)
T 3ro3_A 13 GNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQ----------- 81 (164)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----------
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-----------
Confidence 344456778999999999998875311 11 011247888999999999999999999997653110
Q ss_pred cccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 146 WKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 146 ~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
..........|..+-..+.+.|+.++|.+.+++....
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 118 (164)
T 3ro3_A 82 LKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAI 118 (164)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 0000012567888888999999999999999887653
No 99
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=94.43 E-value=0.11 Score=49.23 Aligned_cols=99 Identities=11% Similarity=-0.015 Sum_probs=74.3
Q ss_pred HHHHHcCCCHHHHHHHHHHHhhcCCCCcC--hhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCC
Q 047498 73 LSRVSGAKDASEVLEIVAESSKRSGGVLT--VDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSR 150 (566)
Q Consensus 73 IrGLCKAGrlDEAleLL~EM~er~Gg~PD--vvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~ 150 (566)
=..+.+.|++++|.+.|++..+.....++ ...|+.+-..+.+.|+.++|++.|++.....-. .....
T Consensus 55 g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-----------~~~~~ 123 (411)
T 4a1s_A 55 GERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKS-----------MNDRL 123 (411)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-----------TTCHH
T ss_pred HHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-----------ccCch
Confidence 34678899999999999999753211111 147889999999999999999999997643100 00001
Q ss_pred CChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 151 PDVSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 151 PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
....+|+.+-..+.+.|+.++|++.|++..+.
T Consensus 124 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 155 (411)
T 4a1s_A 124 GEAKSSGNLGNTLKVMGRFDEAAICCERHLTL 155 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 34678899999999999999999999987654
No 100
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=94.43 E-value=0.15 Score=51.63 Aligned_cols=97 Identities=14% Similarity=0.010 Sum_probs=62.3
Q ss_pred HHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCC-cccccc--cc-------------c-
Q 047498 85 VLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSE-NGTLVD--RW-------------K- 147 (566)
Q Consensus 85 AleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~Pdvv-TYaLi~--~~-------------r- 147 (566)
|...|++..+ ...++..++..+-..+...|+.++|++++.+-...|-.++.. .+.+.. .+ +
T Consensus 85 a~~~l~~l~~--~~~~~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~ 162 (310)
T 3mv2_B 85 NIEELENLLK--DKQNSPYELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNY 162 (310)
T ss_dssp CCHHHHHTTT--TSCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHh--cCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 7888888874 224566666788899999999999999999875544211111 111111 00 0
Q ss_pred -cCCCC-----hHhHHHHHHH--HHhcC--CHHHHHHHHHHHHhCC
Q 047498 148 -WSRPD-----VSVYTSLVQS--LAASL--KVSDALRLIDDISRVG 183 (566)
Q Consensus 148 -w~~PD-----VVTYNTLIdG--LCKsG--RVdEAlkLLeEM~~rG 183 (566)
-..|| --+-.-|..+ ....| +..+|+.+|+++..+.
T Consensus 163 ~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~ 208 (310)
T 3mv2_B 163 TNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTF 208 (310)
T ss_dssp HHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTS
T ss_pred HhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhC
Confidence 02672 4555555555 33345 9999999999998764
No 101
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=94.36 E-value=0.21 Score=39.10 Aligned_cols=77 Identities=12% Similarity=0.065 Sum_probs=63.1
Q ss_pred CcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHH
Q 047498 99 VLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDD 178 (566)
Q Consensus 99 ~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeE 178 (566)
..+...|..+-..+.+.|+.++|++.|++...... -|...|..+-..+.+.|+.++|++.|++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~-----------------~~~~~~~~la~~~~~~~~~~~A~~~~~~ 75 (133)
T 2lni_A 13 PDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNP-----------------KDAKLYSNRAACYTKLLEFQLALKDCEE 75 (133)
T ss_dssp SCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCT-----------------TCHHHHHHHHHHHTTTTCHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC-----------------CcHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 45677889999999999999999999999886532 3678899999999999999999999999
Q ss_pred HHhCCCCCCCcccccc
Q 047498 179 ISRVGVSPGEEVPFGK 194 (566)
Q Consensus 179 M~~rGcsPdDvVTYnt 194 (566)
..+. .|++...|..
T Consensus 76 a~~~--~~~~~~~~~~ 89 (133)
T 2lni_A 76 CIQL--EPTFIKGYTR 89 (133)
T ss_dssp HHHH--CTTCHHHHHH
T ss_pred HHHh--CCCchHHHHH
Confidence 9885 4644333333
No 102
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=94.35 E-value=0.046 Score=46.51 Aligned_cols=98 Identities=8% Similarity=0.103 Sum_probs=72.0
Q ss_pred HHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHh
Q 047498 76 VSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSV 155 (566)
Q Consensus 76 LCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVT 155 (566)
+...|++++|.+.|.+..+.. .-+...|..+-..+.+.|+.++|++.|++.....- -|...
T Consensus 20 ~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p-----------------~~~~~ 80 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRAN--PQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRG-----------------ENAEL 80 (177)
T ss_dssp CC-----CCCCHHHHHHHHHC--CSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHC-----------------SCHHH
T ss_pred hhhccCHHHHHHHHHHHHHhC--CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC-----------------CCHHH
Confidence 456789999999999886422 23567889999999999999999999999876532 36667
Q ss_pred HHHHHHH-HHhcCCH--HHHHHHHHHHHhCCCCCCCcccccc
Q 047498 156 YTSLVQS-LAASLKV--SDALRLIDDISRVGVSPGEEVPFGK 194 (566)
Q Consensus 156 YNTLIdG-LCKsGRV--dEAlkLLeEM~~rGcsPdDvVTYnt 194 (566)
|..+-.. +.+.|+. ++|++.|++..+. .|++...|..
T Consensus 81 ~~~la~~l~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~ 120 (177)
T 2e2e_A 81 YAALATVLYYQASQHMTAQTRAMIDKALAL--DSNEITALML 120 (177)
T ss_dssp HHHHHHHHHHHTTTCCCHHHHHHHHHHHHH--CTTCHHHHHH
T ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHh--CCCcHHHHHH
Confidence 7777777 6689998 9999999999886 4644444433
No 103
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=94.33 E-value=0.15 Score=47.52 Aligned_cols=96 Identities=10% Similarity=-0.027 Sum_probs=60.4
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhhc---CCC-CcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCcccccccc
Q 047498 71 ELLSRVSGAKDASEVLEIVAESSKR---SGG-VLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRW 146 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~er---~Gg-~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~ 146 (566)
.+-..+.+.|+.++|.+.+++..+. .+. .....+|+.+-..+.+.|+.++|.+.|++.....-.
T Consensus 232 ~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~------------ 299 (406)
T 3sf4_A 232 NLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE------------ 299 (406)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH------------
T ss_pred HHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHh------------
Confidence 3444566677777777777766421 111 011456677777777777777777777776543110
Q ss_pred ccCCCC----hHhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 047498 147 KWSRPD----VSVYTSLVQSLAASLKVSDALRLIDDISR 181 (566)
Q Consensus 147 rw~~PD----VVTYNTLIdGLCKsGRVdEAlkLLeEM~~ 181 (566)
.+| ..+|..|-..+.+.|+.++|++.|++..+
T Consensus 300 ---~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 335 (406)
T 3sf4_A 300 ---LNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLE 335 (406)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred ---cCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 122 56777788888888888888888877544
No 104
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=94.33 E-value=0.27 Score=50.51 Aligned_cols=97 Identities=8% Similarity=-0.079 Sum_probs=79.5
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWS 149 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~ 149 (566)
..+-..+.+.|++++|.+.|++..+. ..-+...|+.+-..+.+.|+.++|.+.|++..+..-
T Consensus 27 ~~lg~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p---------------- 88 (568)
T 2vsy_A 27 LMLADAELGMGDTTAGEMAVQRGLAL--HPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAP---------------- 88 (568)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTT--STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT----------------
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCC----------------
Confidence 34555677789999999999999742 223567889999999999999999999999876532
Q ss_pred CCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCC
Q 047498 150 RPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVS 185 (566)
Q Consensus 150 ~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcs 185 (566)
-|...|..|-..+.+.|+.++|++.|++..+..-.
T Consensus 89 -~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~ 123 (568)
T 2vsy_A 89 -EHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPE 123 (568)
T ss_dssp -TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred -CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 35778999999999999999999999998877653
No 105
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=94.33 E-value=0.23 Score=54.93 Aligned_cols=106 Identities=11% Similarity=0.096 Sum_probs=87.5
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhhcCCCCc-ChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccC
Q 047498 71 ELLSRVSGAKDASEVLEIVAESSKRSGGVL-TVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWS 149 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~er~Gg~P-DvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~ 149 (566)
.|=..+.+.|++++|++.|++..+.. | +..+|+-|=..|.+.|+.++|++.|++-.+..
T Consensus 14 nLG~~~~~~G~~~eAi~~~~kAl~l~---P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~----------------- 73 (723)
T 4gyw_A 14 NLANIKREQGNIEEAVRLYRKALEVF---PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS----------------- 73 (723)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHC---SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----------------
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC---CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----------------
Confidence 34455778999999999999987532 3 46788999999999999999999999987652
Q ss_pred CC-ChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceeccc
Q 047498 150 RP-DVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVRCP 199 (566)
Q Consensus 150 ~P-DVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~C~ 199 (566)
| +...|+-|=..|.+.|+.++|++.|++-.+ +.|++...|+.+-.++
T Consensus 74 -P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~--l~P~~~~a~~~Lg~~~ 121 (723)
T 4gyw_A 74 -PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQ--INPAFADAHSNLASIH 121 (723)
T ss_dssp -TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HCTTCHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHH
Confidence 4 477899999999999999999999999887 4787777777765544
No 106
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=94.29 E-value=0.33 Score=43.98 Aligned_cols=97 Identities=9% Similarity=-0.022 Sum_probs=72.6
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcCCCCcC-hhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCC
Q 047498 74 SRVSGAKDASEVLEIVAESSKRSGGVLT-VDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPD 152 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~Gg~PD-vvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PD 152 (566)
..+.+.|++++|.+.|.+..+.....+. ...+.-+-..+.+.|+.++|+..|++....... .|+
T Consensus 23 ~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~---------------~~~ 87 (261)
T 3qky_A 23 MEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQI---------------DPR 87 (261)
T ss_dssp HHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------CTT
T ss_pred HHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCC---------------Cch
Confidence 3466899999999999999853211111 567788889999999999999999998876321 122
Q ss_pred -hHhHHHHHHHHHh--------cCCHHHHHHHHHHHHhCCCCCC
Q 047498 153 -VSVYTSLVQSLAA--------SLKVSDALRLIDDISRVGVSPG 187 (566)
Q Consensus 153 -VVTYNTLIdGLCK--------sGRVdEAlkLLeEM~~rGcsPd 187 (566)
...|..+-..+-+ .|+.++|++.|++..+. .|+
T Consensus 88 ~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~--~p~ 129 (261)
T 3qky_A 88 VPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDR--YPN 129 (261)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHH--CTT
T ss_pred hHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHH--CcC
Confidence 3345566666666 99999999999999885 364
No 107
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=94.16 E-value=0.27 Score=38.94 Aligned_cols=101 Identities=10% Similarity=-0.044 Sum_probs=72.4
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhc---CCC-CcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccc
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKR---SGG-VLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDR 145 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er---~Gg-~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~ 145 (566)
..+-..+...|++++|.+.+.+..+. .+. ......|..+-..+.+.|+.++|.+.|++.....-.
T Consensus 53 ~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~----------- 121 (164)
T 3ro3_A 53 SNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE----------- 121 (164)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----------
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH-----------
Confidence 34556677899999999999987521 111 111456788888999999999999999987643110
Q ss_pred cccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 047498 146 WKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISR 181 (566)
Q Consensus 146 ~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~ 181 (566)
.........+|..|-..+.+.|+.++|.+.+++..+
T Consensus 122 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 157 (164)
T 3ro3_A 122 LKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLE 157 (164)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred ccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 000011256788889999999999999999988654
No 108
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=94.12 E-value=0.14 Score=47.78 Aligned_cols=101 Identities=12% Similarity=-0.077 Sum_probs=73.7
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhhc---CCC-CcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCcccccccc
Q 047498 71 ELLSRVSGAKDASEVLEIVAESSKR---SGG-VLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRW 146 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~er---~Gg-~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~ 146 (566)
.+-..+...|++++|.+.|.+..+. .+. ......|+.+-..+.+.|+.++|...|++.....-. .
T Consensus 192 ~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-----------~ 260 (406)
T 3sf4_A 192 NLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQ-----------L 260 (406)
T ss_dssp HHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----------T
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh-----------C
Confidence 4445677899999999999988531 111 111347889999999999999999999987643210 0
Q ss_pred ccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 147 KWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 147 rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
....-...+|+.+-..+.+.|+.++|.+.|++....
T Consensus 261 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 296 (406)
T 3sf4_A 261 KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAI 296 (406)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 000011678999999999999999999999987664
No 109
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=94.04 E-value=0.21 Score=52.91 Aligned_cols=97 Identities=8% Similarity=-0.038 Sum_probs=72.1
Q ss_pred HHHHcCCCHHHHHHHHHHHhhc----CCC-CcCh-hhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccc
Q 047498 74 SRVSGAKDASEVLEIVAESSKR----SGG-VLTV-DECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWK 147 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er----~Gg-~PDv-vTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~r 147 (566)
..+-..|++++|..++.+..+. .|. .|++ .+||.|-..|...|+.++|..++++...--- ..+.
T Consensus 317 ~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~----------~~lG 386 (490)
T 3n71_A 317 DKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYM----------KLYH 386 (490)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH----------HHSC
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH----------HHcC
Confidence 3466899999999998776421 121 4544 5789999999999999999999998754210 0000
Q ss_pred cCCCCh-HhHHHHHHHHHhcCCHHHHHHHHHHHH
Q 047498 148 WSRPDV-SVYTSLVQSLAASLKVSDALRLIDDIS 180 (566)
Q Consensus 148 w~~PDV-VTYNTLIdGLCKsGRVdEAlkLLeEM~ 180 (566)
--.||+ .+||-|=.-|...|++++|..++++-.
T Consensus 387 ~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al 420 (490)
T 3n71_A 387 HNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAY 420 (490)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 115664 579999999999999999999998654
No 110
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=93.97 E-value=0.25 Score=38.10 Aligned_cols=81 Identities=5% Similarity=-0.175 Sum_probs=62.6
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWS 149 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~ 149 (566)
..+-..+...|+.++|.+.+.+..+. ..-+...|..+-..+.+.|+.++|.+.|++......
T Consensus 50 ~~~a~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p---------------- 111 (131)
T 2vyi_A 50 CNRAAAYSKLGNYAGAVQDCERAICI--DPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDP---------------- 111 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST----------------
T ss_pred HHHHHHHHHhhchHHHHHHHHHHHhc--CccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCc----------------
Confidence 44556778899999999999998752 223467788899999999999999999999876532
Q ss_pred CCChHhHHHHHHHHHhcCCH
Q 047498 150 RPDVSVYTSLVQSLAASLKV 169 (566)
Q Consensus 150 ~PDVVTYNTLIdGLCKsGRV 169 (566)
-+...+..+...+.+.|+.
T Consensus 112 -~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 112 -DNETYKSNLKIAELKLREA 130 (131)
T ss_dssp -TCHHHHHHHHHHHHHHTTC
T ss_pred -cchHHHHHHHHHHHHHhcC
Confidence 3566677777777776653
No 111
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=93.96 E-value=0.32 Score=37.60 Aligned_cols=65 Identities=14% Similarity=0.053 Sum_probs=56.2
Q ss_pred hhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 047498 102 VDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISR 181 (566)
Q Consensus 102 vvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~ 181 (566)
...|..+-..+.+.|+.++|+..|++...... .+...|..+-..+.+.|+.++|+..+++...
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~-----------------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 66 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDP-----------------TNMTYITNQAAVYFEKGDYNKCRELCEKAIE 66 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC-----------------ccHHHHHHHHHHHHHhccHHHHHHHHHHHHh
Confidence 34678888999999999999999999886532 4678899999999999999999999999887
Q ss_pred CC
Q 047498 182 VG 183 (566)
Q Consensus 182 rG 183 (566)
..
T Consensus 67 ~~ 68 (131)
T 1elr_A 67 VG 68 (131)
T ss_dssp HH
T ss_pred hc
Confidence 54
No 112
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=93.95 E-value=0.24 Score=51.18 Aligned_cols=99 Identities=16% Similarity=-0.023 Sum_probs=79.6
Q ss_pred HHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHh
Q 047498 76 VSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSV 155 (566)
Q Consensus 76 LCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVT 155 (566)
+.+.|++++|.+.+++..+.. .-+...|+.+-..+.+.|+.++|++.|++..+... -+...
T Consensus 16 ~~~~g~~~~A~~~~~~Al~~~--p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p-----------------~~~~~ 76 (477)
T 1wao_1 16 YFKAKDYENAIKFYSQAIELN--PSNAIYYGNRSLAYLRTECYGYALGDATRAIELDK-----------------KYIKG 76 (477)
T ss_dssp TTTTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCT-----------------TCHHH
T ss_pred HHHhCCHHHHHHHHHHHHHhC--CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC-----------------CCHHH
Confidence 457899999999999987521 22577899999999999999999999999886532 35778
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccce
Q 047498 156 YTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKV 195 (566)
Q Consensus 156 YNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntL 195 (566)
|+.+-..|.+.|+.++|++.|++..+. .|++...+..+
T Consensus 77 ~~~lg~~~~~~g~~~eA~~~~~~al~~--~p~~~~~~~~l 114 (477)
T 1wao_1 77 YYRRAASNMALGKFRAALRDYETVVKV--KPHDKDAKMKY 114 (477)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHH--STTCTTHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHHHH
Confidence 999999999999999999999998875 56544444433
No 113
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=93.94 E-value=0.19 Score=52.39 Aligned_cols=94 Identities=13% Similarity=0.075 Sum_probs=70.1
Q ss_pred cCCCHHHHHHHHHHHhhc----CCC-CcCh-hhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCC
Q 047498 78 GAKDASEVLEIVAESSKR----SGG-VLTV-DECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRP 151 (566)
Q Consensus 78 KAGrlDEAleLL~EM~er----~Gg-~PDv-vTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~P 151 (566)
+.|++++|..++.+..+. .|. .|++ .+||.|-..|...|+.++|..++++...--- ..+.--.|
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~----------~~lG~~Hp 379 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYS----------KHYPVYSL 379 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH----------HHSCSSCH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH----------HHcCCCCh
Confidence 467899999998876421 121 4554 6789999999999999999999999764210 00011257
Q ss_pred Ch-HhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 047498 152 DV-SVYTSLVQSLAASLKVSDALRLIDDISR 181 (566)
Q Consensus 152 DV-VTYNTLIdGLCKsGRVdEAlkLLeEM~~ 181 (566)
|+ .+||-|=.-|...|+.++|..++++-..
T Consensus 380 ~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~ 410 (433)
T 3qww_A 380 NVASMWLKLGRLYMGLENKAAGEKALKKAIA 410 (433)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 65 5699999999999999999999986543
No 114
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=93.93 E-value=0.29 Score=37.59 Aligned_cols=64 Identities=11% Similarity=0.059 Sum_probs=41.3
Q ss_pred ChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHH
Q 047498 101 TVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDIS 180 (566)
Q Consensus 101 DvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~ 180 (566)
+...|..+=..+.+.|+.++|++.|++...... -|...|.-+-..+.+.|+.++|++.|++..
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p-----------------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 65 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQP-----------------QNPVGYSNKAMALIKLGEYTQAIQMCQQGL 65 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT-----------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC-----------------CCHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 344566666666777777777777776654421 245566666667777777777777777766
Q ss_pred h
Q 047498 181 R 181 (566)
Q Consensus 181 ~ 181 (566)
+
T Consensus 66 ~ 66 (111)
T 2l6j_A 66 R 66 (111)
T ss_dssp T
T ss_pred H
Confidence 5
No 115
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=93.89 E-value=0.18 Score=47.96 Aligned_cols=100 Identities=11% Similarity=-0.047 Sum_probs=54.6
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhhc---CCC-CcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCcccccccc
Q 047498 71 ELLSRVSGAKDASEVLEIVAESSKR---SGG-VLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRW 146 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~er---~Gg-~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~ 146 (566)
.+-..+.+.|++++|.+.|++..+. .+. .....+|..+-..+.+.|+.++|.+.|++.....-. .
T Consensus 268 ~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-----------~ 336 (411)
T 4a1s_A 268 NLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQE-----------L 336 (411)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----------H
T ss_pred HHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-----------C
Confidence 3444555666666666666655321 000 011345566666666666666666666665432100 0
Q ss_pred ccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 047498 147 KWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISR 181 (566)
Q Consensus 147 rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~ 181 (566)
....-...+|..|-..+.+.|+.++|.+.|++..+
T Consensus 337 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 371 (411)
T 4a1s_A 337 GDRIGEARACWSLGNAHSAIGGHERALKYAEQHLQ 371 (411)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 00001134666777777777777777777776654
No 116
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=93.89 E-value=0.16 Score=51.89 Aligned_cols=108 Identities=6% Similarity=-0.161 Sum_probs=87.9
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhc---------CChhHHHHHHHHHHhcCCCCCCCcc
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDR---------GNTDLALSIFYAMRSSFDQGLSENG 140 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKa---------GrVDeAlsLF~EM~srG~~PdvvTY 140 (566)
..|=..+.+.|++++|.+.|++..+. .|+...|..+-..+.+. |+.++|++.|++......
T Consensus 141 ~~lg~~~~~~g~~~~A~~~~~~al~~---~p~~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p------- 210 (474)
T 4abn_A 141 NQLGEVYWKKGDVTSAHTCFSGALTH---CKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDV------- 210 (474)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTT---CCCHHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCT-------
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhh---CCCHHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCC-------
Confidence 35556788899999999999999852 37778889999999999 999999999999886532
Q ss_pred ccccccccCCCChHhHHHHHHHHHhc--------CCHHHHHHHHHHHHhCCCCC---CCcccccceeccc
Q 047498 141 TLVDRWKWSRPDVSVYTSLVQSLAAS--------LKVSDALRLIDDISRVGVSP---GEEVPFGKVVRCP 199 (566)
Q Consensus 141 aLi~~~rw~~PDVVTYNTLIdGLCKs--------GRVdEAlkLLeEM~~rGcsP---dDvVTYntLI~C~ 199 (566)
-|...|+.|-..|.+. |++++|++.|++..+. .| ++...|..+-.++
T Consensus 211 ----------~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~~~~lg~~~ 268 (474)
T 4abn_A 211 ----------LDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKV--DRKASSNPDLHLNRATLH 268 (474)
T ss_dssp ----------TCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH--CGGGGGCHHHHHHHHHHH
T ss_pred ----------CCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHh--CCCcccCHHHHHHHHHHH
Confidence 3578899999999999 9999999999999885 45 5555565554444
No 117
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=93.78 E-value=0.27 Score=41.69 Aligned_cols=93 Identities=9% Similarity=-0.115 Sum_probs=65.9
Q ss_pred HcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhH
Q 047498 77 SGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVY 156 (566)
Q Consensus 77 CKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTY 156 (566)
...|++++|.+.++.... ........|+.+-..+...|+.++|+..|++.....-. .........+|
T Consensus 3 ~~~g~~~~A~~~~~~~~~--~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-----------~~~~~~~~~~~ 69 (203)
T 3gw4_A 3 FEAHDYALAERQAQALLA--HPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQK-----------SGDHTAEHRAL 69 (203)
T ss_dssp ----CHHHHHHHHHHHHT--STTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT-----------TCCHHHHHHHH
T ss_pred cccccHHHHHHHHHHhcC--ChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH-----------cCCcHHHHHHH
Confidence 468999999995554442 11235678899999999999999999999997753110 00001346788
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 157 TSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 157 NTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
+.+-..+...|+.++|.+.+++-.+.
T Consensus 70 ~~l~~~~~~~g~~~~A~~~~~~al~~ 95 (203)
T 3gw4_A 70 HQVGMVERMAGNWDAARRCFLEEREL 95 (203)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 99999999999999999999886653
No 118
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=93.76 E-value=0.25 Score=51.19 Aligned_cols=99 Identities=10% Similarity=-0.021 Sum_probs=74.1
Q ss_pred HHHHHcCCCHHHHHHHHHHHhhcC----CC-CcC-hhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCcccccccc
Q 047498 73 LSRVSGAKDASEVLEIVAESSKRS----GG-VLT-VDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRW 146 (566)
Q Consensus 73 IrGLCKAGrlDEAleLL~EM~er~----Gg-~PD-vvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~ 146 (566)
|..+-+.|++++|.+++.+..+.. |. .|+ ..++|.|...|...|+.++|.+++++...--- ..+
T Consensus 294 ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~----------~~l 363 (429)
T 3qwp_A 294 IEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYR----------IFF 363 (429)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH----------HHS
T ss_pred HHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHH----------HHc
Confidence 567888999999999998885321 11 233 35789999999999999999999998764210 000
Q ss_pred ccCCCCh-HhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 047498 147 KWSRPDV-SVYTSLVQSLAASLKVSDALRLIDDISR 181 (566)
Q Consensus 147 rw~~PDV-VTYNTLIdGLCKsGRVdEAlkLLeEM~~ 181 (566)
.--.|++ .+||-|=.-|...|++++|..++++-.+
T Consensus 364 g~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~ 399 (429)
T 3qwp_A 364 PGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFD 399 (429)
T ss_dssp CSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 0115665 6799999999999999999999986543
No 119
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=93.76 E-value=0.25 Score=41.86 Aligned_cols=98 Identities=12% Similarity=-0.058 Sum_probs=73.7
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhh---cCCC-CcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccc
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSK---RSGG-VLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDR 145 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~e---r~Gg-~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~ 145 (566)
..+-..+...|++++|.+.+++..+ ..+. ......|+.+=..+...|+.++|.+.|++-....-.
T Consensus 30 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~----------- 98 (203)
T 3gw4_A 30 FMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLAS----------- 98 (203)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----------
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-----------
Confidence 4455567789999999999988753 1112 234567888889999999999999999986643110
Q ss_pred cccCCC-----ChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 146 WKWSRP-----DVSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 146 ~rw~~P-----DVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
.+ ....|+.|-..+.+.|++++|.+.+++....
T Consensus 99 ----~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 136 (203)
T 3gw4_A 99 ----LPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVY 136 (203)
T ss_dssp ----SCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred ----cCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 12 2456888899999999999999999987653
No 120
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=93.72 E-value=0.029 Score=43.25 Aligned_cols=57 Identities=9% Similarity=-0.141 Sum_probs=47.2
Q ss_pred HHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhc
Q 047498 73 LSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSS 131 (566)
Q Consensus 73 IrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~sr 131 (566)
=..+.+.|++++|++.|++..+.. .-+...|.-+-..+.+.|+.++|++.|++....
T Consensus 11 g~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 67 (111)
T 2l6j_A 11 GNSLFKQGLYREAVHCYDQLITAQ--PQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRY 67 (111)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 345678999999999999987422 235677888999999999999999999998854
No 121
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=93.61 E-value=0.92 Score=42.23 Aligned_cols=93 Identities=12% Similarity=0.058 Sum_probs=67.9
Q ss_pred HHHcCCCHHHHHHHHHHHhhcCC--CCcC--hhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCC
Q 047498 75 RVSGAKDASEVLEIVAESSKRSG--GVLT--VDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSR 150 (566)
Q Consensus 75 GLCKAGrlDEAleLL~EM~er~G--g~PD--vvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~ 150 (566)
-+...|+.++|++.|.+..+... ..+. ..+|+.+=..|.+.|+.++|++.|++.....-. .
T Consensus 124 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~---------------~ 188 (293)
T 2qfc_A 124 YVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEA---------------L 188 (293)
T ss_dssp HHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH---------------S
T ss_pred HHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh---------------c
Confidence 34667899999999888753111 1111 347888889999999999999999887632000 1
Q ss_pred C-----ChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 151 P-----DVSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 151 P-----DVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
| ++.+|+-+-..|.+.|+.++|++.+++-.+-
T Consensus 189 ~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~ 225 (293)
T 2qfc_A 189 HDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEI 225 (293)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 2 2368999999999999999999999987653
No 122
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=93.56 E-value=0.44 Score=44.76 Aligned_cols=96 Identities=10% Similarity=-0.007 Sum_probs=69.5
Q ss_pred HHHHcC-CCHHHHHHHHHHHhhc---CCCCcC-hhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCcccccccccc
Q 047498 74 SRVSGA-KDASEVLEIVAESSKR---SGGVLT-VDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKW 148 (566)
Q Consensus 74 rGLCKA-GrlDEAleLL~EM~er---~Gg~PD-vvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw 148 (566)
.-+.+. |++++|++.|++..+- .+.... ..+|+-+-..+++.|+.++|++.|++.......
T Consensus 125 ~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-------------- 190 (292)
T 1qqe_A 125 EILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMG-------------- 190 (292)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSS--------------
T ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc--------------
Confidence 345554 9999999999987531 111001 346888999999999999999999998875432
Q ss_pred CCCCh-----HhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCC
Q 047498 149 SRPDV-----SVYTSLVQSLAASLKVSDALRLIDDISRVGVSP 186 (566)
Q Consensus 149 ~~PDV-----VTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsP 186 (566)
.++. .+|..+...+.+.|+.++|++.|++... +.|
T Consensus 191 -~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~--l~p 230 (292)
T 1qqe_A 191 -NRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQS--EDP 230 (292)
T ss_dssp -CTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGC--C--
T ss_pred -CCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hCC
Confidence 1222 1577777888899999999999998765 455
No 123
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=93.56 E-value=0.4 Score=36.34 Aligned_cols=76 Identities=17% Similarity=0.066 Sum_probs=61.0
Q ss_pred ChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHH
Q 047498 101 TVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDIS 180 (566)
Q Consensus 101 DvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~ 180 (566)
+...|..+...+.+.|+.++|++.|++...... .|...|.-+-..+.+.|+.++|.+.+++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~-----------------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~ 65 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDP-----------------HNHVLYSNRSAAYAKKGDYQKAYEDGCKTV 65 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCC-----------------CcHHHHHHHHHHHHhhccHHHHHHHHHHHH
Confidence 345688889999999999999999999886532 367888999999999999999999999998
Q ss_pred hCCCCCCCcccccce
Q 047498 181 RVGVSPGEEVPFGKV 195 (566)
Q Consensus 181 ~rGcsPdDvVTYntL 195 (566)
+. .|++...|..+
T Consensus 66 ~~--~~~~~~~~~~~ 78 (118)
T 1elw_A 66 DL--KPDWGKGYSRK 78 (118)
T ss_dssp HH--CTTCHHHHHHH
T ss_pred Hh--CcccHHHHHHH
Confidence 85 45443344333
No 124
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=93.56 E-value=0.39 Score=38.16 Aligned_cols=64 Identities=14% Similarity=0.081 Sum_probs=47.7
Q ss_pred ChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHH
Q 047498 101 TVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDIS 180 (566)
Q Consensus 101 DvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~ 180 (566)
|...+..+=..+.+.|+.++|++.|++..+... -+...|..|=..|.+.|+.++|++.|++..
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p-----------------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al 68 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETDP-----------------DYVGTYYHLGKLYERLDRTDDAIDTYAQGI 68 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-----------------TCTHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----------------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 445677777788888888888888888776532 245567778888888888888888887765
Q ss_pred h
Q 047498 181 R 181 (566)
Q Consensus 181 ~ 181 (566)
+
T Consensus 69 ~ 69 (100)
T 3ma5_A 69 E 69 (100)
T ss_dssp H
T ss_pred h
Confidence 4
No 125
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=93.52 E-value=0.44 Score=35.32 Aligned_cols=68 Identities=12% Similarity=0.132 Sum_probs=52.4
Q ss_pred hhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 047498 102 VDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISR 181 (566)
Q Consensus 102 vvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~ 181 (566)
...|..+-..+.+.|+.++|++.|++...... -+...|..+-..+.+.|+.++|++.|++..+
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~-----------------~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 71 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDP-----------------NNAEAWYNLGNAYYKQGDYDEAIEYYQKALE 71 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCC-----------------CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 45677777788888999999999988776532 3566788888888899999999999988877
Q ss_pred CCCCCCC
Q 047498 182 VGVSPGE 188 (566)
Q Consensus 182 rGcsPdD 188 (566)
. .|++
T Consensus 72 ~--~p~~ 76 (91)
T 1na3_A 72 L--DPNN 76 (91)
T ss_dssp H--CTTC
T ss_pred c--CCCC
Confidence 4 4543
No 126
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=93.44 E-value=0.49 Score=48.27 Aligned_cols=107 Identities=5% Similarity=-0.107 Sum_probs=81.7
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcCCCCcC-------------hhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCcc
Q 047498 74 SRVSGAKDASEVLEIVAESSKRSGGVLT-------------VDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENG 140 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~Gg~PD-------------vvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTY 140 (566)
..+.+.|++++|+..|++..+.....++ ...|+-+=.+|.+.|+.++|+..|++.....-
T Consensus 276 ~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p------- 348 (457)
T 1kt0_A 276 TVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDS------- 348 (457)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-------
T ss_pred HHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC-------
Confidence 5678899999999999988742111111 57888999999999999999999999886532
Q ss_pred ccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceeccc
Q 047498 141 TLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVRCP 199 (566)
Q Consensus 141 aLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~C~ 199 (566)
-|...|.-+=..|.+.|+.++|++.|++..+ +.|++.-.|..+-.++
T Consensus 349 ----------~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~--l~P~~~~a~~~l~~~~ 395 (457)
T 1kt0_A 349 ----------ANEKGLYRRGEAQLLMNEFESAKGDFEKVLE--VNPQNKAARLQISMCQ 395 (457)
T ss_dssp ----------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT--TC----CHHHHHHHHH
T ss_pred ----------ccHHHHHHHHHHHHHccCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHH
Confidence 4678899999999999999999999999987 4676655555554443
No 127
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=93.40 E-value=0.34 Score=47.13 Aligned_cols=92 Identities=11% Similarity=-0.001 Sum_probs=75.0
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCC
Q 047498 71 ELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSR 150 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~ 150 (566)
.+-..+.+.|++++|++.+++..+.. .-+...|.-+=.+|.+.|+.++|+..|++......
T Consensus 201 nla~~~~~~g~~~~A~~~~~~al~~~--p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P----------------- 261 (336)
T 1p5q_A 201 NLAMCHLKLQAFSAAIESCNKALELD--SNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYP----------------- 261 (336)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS-----------------
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC--CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC-----------------
Confidence 44456778999999999999997522 23677899999999999999999999999886532
Q ss_pred CChHhHHHHHHHHHhcCCHHHH-HHHHHHHHh
Q 047498 151 PDVSVYTSLVQSLAASLKVSDA-LRLIDDISR 181 (566)
Q Consensus 151 PDVVTYNTLIdGLCKsGRVdEA-lkLLeEM~~ 181 (566)
-|...|..|-..+.+.|+.++| .+++..|..
T Consensus 262 ~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~ 293 (336)
T 1p5q_A 262 NNKAAKTQLAVCQQRIRRQLAREKKLYANMFE 293 (336)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3577889999999999999999 557777754
No 128
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=93.37 E-value=0.61 Score=41.83 Aligned_cols=98 Identities=11% Similarity=0.068 Sum_probs=68.5
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcCCCCc-ChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCC
Q 047498 74 SRVSGAKDASEVLEIVAESSKRSGGVL-TVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPD 152 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~Gg~P-DvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PD 152 (566)
..+-+.|++++|.+.|++..+.....| ....+.-+-.++.+.|+.++|++.|++..+.... .|+
T Consensus 12 ~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~---------------~~~ 76 (225)
T 2yhc_A 12 QQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPT---------------HPN 76 (225)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------CTT
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC---------------CCc
Confidence 347778999999999999975321112 1346777889999999999999999999876421 122
Q ss_pred hHhHHHHHHHHH--------------------hcCCHHHHHHHHHHHHhCCCCCCCc
Q 047498 153 VSVYTSLVQSLA--------------------ASLKVSDALRLIDDISRVGVSPGEE 189 (566)
Q Consensus 153 VVTYNTLIdGLC--------------------KsGRVdEAlkLLeEM~~rGcsPdDv 189 (566)
+ .+.-...|.| +.|+.++|++.|+++.+. .|++.
T Consensus 77 ~-~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~--~P~~~ 130 (225)
T 2yhc_A 77 I-DYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRG--YPNSQ 130 (225)
T ss_dssp H-HHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTT--CTTCT
T ss_pred H-HHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHH--CcCCh
Confidence 1 1222223333 368999999999999885 46443
No 129
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=93.09 E-value=0.5 Score=42.40 Aligned_cols=88 Identities=9% Similarity=0.072 Sum_probs=68.2
Q ss_pred cCCCHHHHHHHHHHHhhcCCCCcChh-hh-----------------HHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCc
Q 047498 78 GAKDASEVLEIVAESSKRSGGVLTVD-EC-----------------CLIINAAIDRGNTDLALSIFYAMRSSFDQGLSEN 139 (566)
Q Consensus 78 KAGrlDEAleLL~EM~er~Gg~PDvv-TY-----------------NsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvT 139 (566)
..|+.++|+..|++..+.. |+.. .+ -.+-..+.+.|+.++|+..|+++.+.-
T Consensus 108 ~~~~~~~A~~~~~~~l~~~---P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~------- 177 (225)
T 2yhc_A 108 DPQQARAAFSDFSKLVRGY---PNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDY------- 177 (225)
T ss_dssp CCHHHHHHHHHHHHHHTTC---TTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS-------
T ss_pred CcHHHHHHHHHHHHHHHHC---cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHC-------
Confidence 3689999999999998532 4322 11 134456889999999999999998763
Q ss_pred cccccccccCCCCh----HhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCC
Q 047498 140 GTLVDRWKWSRPDV----SVYTSLVQSLAASLKVSDALRLIDDISRVGVSP 186 (566)
Q Consensus 140 YaLi~~~rw~~PDV----VTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsP 186 (566)
||- -.+..+...+-+.|+.++|++.++.+...+..-
T Consensus 178 -----------p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~~~~~~ 217 (225)
T 2yhc_A 178 -----------PDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAANSSNT 217 (225)
T ss_dssp -----------TTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCCSCC
T ss_pred -----------cCCCccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCCc
Confidence 442 467888999999999999999999998876543
No 130
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=93.07 E-value=0.36 Score=47.16 Aligned_cols=102 Identities=8% Similarity=-0.057 Sum_probs=73.3
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcCCCCcChh------------------hhHHHHHHHHhcCChhHHHHHHHHHHhcCCCC
Q 047498 74 SRVSGAKDASEVLEIVAESSKRSGGVLTVD------------------ECCLIINAAIDRGNTDLALSIFYAMRSSFDQG 135 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~Gg~PDvv------------------TYNsLI~GlCKaGrVDeAlsLF~EM~srG~~P 135 (566)
..+.+.|++++|...|.+.... .|+.. .|+-+=.+|.+.|+.++|+..|++.....-
T Consensus 187 ~~~~~~g~~~~A~~~y~~Al~~---~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p-- 261 (338)
T 2if4_A 187 NSLFKEEKLEEAMQQYEMAIAY---MGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEE-- 261 (338)
T ss_dssp HHTCSSSCCHHHHHHHHHHHHH---SCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCT--
T ss_pred HHHHhcCCHHHHHHHHHHHHHH---hccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--
Confidence 4566799999999999997642 24433 688888999999999999999999876531
Q ss_pred CCCccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceec
Q 047498 136 LSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVR 197 (566)
Q Consensus 136 dvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~ 197 (566)
-|...|.-+-..|.+.|+.++|++.|++..+ +.|++.-.+..|-.
T Consensus 262 ---------------~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~--l~p~~~~a~~~L~~ 306 (338)
T 2if4_A 262 ---------------KNPKALFRRGKAKAELGQMDSARDDFRKAQK--YAPDDKAIRRELRA 306 (338)
T ss_dssp ---------------TCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC----------------
T ss_pred ---------------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--HCCCCHHHHHHHHH
Confidence 3678899999999999999999999998865 45755545544443
No 131
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=92.90 E-value=0.35 Score=45.43 Aligned_cols=98 Identities=5% Similarity=0.020 Sum_probs=63.6
Q ss_pred HHHHHcCCCHHHHHHHHHHHhhc---CCCCc-ChhhhHHHHHHHHhc-CChhHHHHHHHHHHhcCCCCCCCccccccccc
Q 047498 73 LSRVSGAKDASEVLEIVAESSKR---SGGVL-TVDECCLIINAAIDR-GNTDLALSIFYAMRSSFDQGLSENGTLVDRWK 147 (566)
Q Consensus 73 IrGLCKAGrlDEAleLL~EM~er---~Gg~P-DvvTYNsLI~GlCKa-GrVDeAlsLF~EM~srG~~PdvvTYaLi~~~r 147 (566)
-..+.+.|++++|++.+++..+- .|... -..+|+-|=..|.+. |+.++|+..|++-....-.
T Consensus 84 g~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~------------- 150 (292)
T 1qqe_A 84 YKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQ------------- 150 (292)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH-------------
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHh-------------
Confidence 34455677777777777665421 11100 134566666667775 7777777777765532100
Q ss_pred cCCCC----hHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCC
Q 047498 148 WSRPD----VSVYTSLVQSLAASLKVSDALRLIDDISRVGVS 185 (566)
Q Consensus 148 w~~PD----VVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcs 185 (566)
..+ ..+|+-+-..+++.|+.++|+..|++..+....
T Consensus 151 --~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 190 (292)
T 1qqe_A 151 --DQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMG 190 (292)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSS
T ss_pred --CCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc
Confidence 011 457899999999999999999999999986543
No 132
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=92.87 E-value=0.88 Score=42.36 Aligned_cols=97 Identities=9% Similarity=0.011 Sum_probs=70.6
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcCCCCcC----hhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccC
Q 047498 74 SRVSGAKDASEVLEIVAESSKRSGGVLT----VDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWS 149 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~Gg~PD----vvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~ 149 (566)
.-+...|+.++|++.|.+..+......| ...|+.|-..|.+.|+.++|++.|++....--. ....
T Consensus 123 ~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~-----------~~~~ 191 (293)
T 3u3w_A 123 AYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEA-----------LHDN 191 (293)
T ss_dssp HHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----------SSCC
T ss_pred HHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-----------cccc
Confidence 3345567999999999998742111233 236899999999999999999999998742100 0000
Q ss_pred CCCh-HhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 047498 150 RPDV-SVYTSLVQSLAASLKVSDALRLIDDISR 181 (566)
Q Consensus 150 ~PDV-VTYNTLIdGLCKsGRVdEAlkLLeEM~~ 181 (566)
.++. .+|+-|-..|.+.|+.++|++.+++-..
T Consensus 192 ~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~ 224 (293)
T 3u3w_A 192 EEFDVKVRYNHAKALYLDSRYEESLYQVNKAIE 224 (293)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 2333 4899999999999999999999987665
No 133
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=92.85 E-value=0.46 Score=48.06 Aligned_cols=115 Identities=3% Similarity=-0.052 Sum_probs=75.8
Q ss_pred HHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCC-hhHHHHHHHHHHhcCCCCCCC-cc-cc------
Q 047498 72 LLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGN-TDLALSIFYAMRSSFDQGLSE-NG-TL------ 142 (566)
Q Consensus 72 LIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGr-VDeAlsLF~EM~srG~~Pdvv-TY-aL------ 142 (566)
+-..+.+.|+.++|++.+++..+.. .=+...|+.+=..+.+.|+ .++|+..|++..... |+.. .| .+
T Consensus 103 lg~~~~~~g~~~~Al~~~~~al~l~--P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~--P~~~~a~~~~g~~~~~ 178 (382)
T 2h6f_A 103 FRAVLQRDERSERAFKLTRDAIELN--AANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQ--PKNYQVWHHRRVLVEW 178 (382)
T ss_dssp HHHHHHHTCCCHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCChHHHHHHHHHHHHhC--ccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHH
Confidence 3345667888999999988887421 1245677888888888887 999999998887643 2221 00 00
Q ss_pred cccc--------cc--CCC-ChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccc
Q 047498 143 VDRW--------KW--SRP-DVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPF 192 (566)
Q Consensus 143 i~~~--------rw--~~P-DVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTY 192 (566)
...+ +. ..| |...|+-+-..|.+.|++++|++.|+++++. .|++...|
T Consensus 179 ~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l--~P~~~~a~ 237 (382)
T 2h6f_A 179 LRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKE--DVRNNSVW 237 (382)
T ss_dssp HTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHH--CTTCHHHH
T ss_pred ccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHh--CCCCHHHH
Confidence 0000 00 134 6778888888888899999999999988874 55443333
No 134
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=92.75 E-value=0.33 Score=41.76 Aligned_cols=120 Identities=12% Similarity=0.121 Sum_probs=75.8
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCcccc---c---cccc
Q 047498 74 SRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTL---V---DRWK 147 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaL---i---~~~r 147 (566)
..+.+.|++++|...|++..+.. .-+...+..+-..+.+.|+.++|+..|++..... |+...+.+ . ....
T Consensus 14 ~~~~~~g~~~~A~~~~~~al~~~--P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~--p~~~~~~~~~~~~~~~~~~ 89 (176)
T 2r5s_A 14 SELLQQGEHAQALNVIQTLSDEL--QSRGDVKLAKADCLLETKQFELAQELLATIPLEY--QDNSYKSLIAKLELHQQAA 89 (176)
T ss_dssp HHHHHTTCHHHHHHHHHTSCHHH--HTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGG--CCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHHHHHHC--CCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhcc--CChHHHHHHHHHHHHhhcc
Confidence 34666788888888887765311 1245567777777888888888888877654322 21110000 0 0000
Q ss_pred c------------CCC-ChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceec
Q 047498 148 W------------SRP-DVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVR 197 (566)
Q Consensus 148 w------------~~P-DVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~ 197 (566)
. ..| |...|..|-..|.+.|+.++|++.|+++.+..-.+++...+..+..
T Consensus 90 ~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~ 152 (176)
T 2r5s_A 90 ESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMD 152 (176)
T ss_dssp SCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHH
T ss_pred cchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHH
Confidence 0 146 5888999999999999999999999999987654433334444443
No 135
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=92.69 E-value=0.17 Score=43.28 Aligned_cols=80 Identities=14% Similarity=0.005 Sum_probs=63.2
Q ss_pred ChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHH
Q 047498 101 TVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDIS 180 (566)
Q Consensus 101 DvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~ 180 (566)
+...+..+-..+.+.|+.++|+..|++...... -|...|..+=..+.+.|+.++|++.|++..
T Consensus 20 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p-----------------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 82 (148)
T 2vgx_A 20 TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDH-----------------YDSRFFLGLGACRQAMGQYDLAIHSYSYGA 82 (148)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCc-----------------ccHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 455677788899999999999999999876532 467788888889999999999999999998
Q ss_pred hCCCCCCCcccccceeccc
Q 047498 181 RVGVSPGEEVPFGKVVRCP 199 (566)
Q Consensus 181 ~rGcsPdDvVTYntLI~C~ 199 (566)
.. .|++...|..+-.|+
T Consensus 83 ~l--~p~~~~~~~~lg~~~ 99 (148)
T 2vgx_A 83 VM--DIXEPRFPFHAAECL 99 (148)
T ss_dssp HH--STTCTHHHHHHHHHH
T ss_pred hc--CCCCchHHHHHHHHH
Confidence 74 576655555444343
No 136
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=92.62 E-value=0.89 Score=41.10 Aligned_cols=95 Identities=7% Similarity=-0.145 Sum_probs=69.9
Q ss_pred HHHHHHcCCCHHHHHHHHHHHhhcCCCCcC-hhhhHHHHHHHHh--------cCChhHHHHHHHHHHhcCCCCCCCcccc
Q 047498 72 LLSRVSGAKDASEVLEIVAESSKRSGGVLT-VDECCLIINAAID--------RGNTDLALSIFYAMRSSFDQGLSENGTL 142 (566)
Q Consensus 72 LIrGLCKAGrlDEAleLL~EM~er~Gg~PD-vvTYNsLI~GlCK--------aGrVDeAlsLF~EM~srG~~PdvvTYaL 142 (566)
+-..+.+.|++++|++.|++..+.....|+ ...|..+-..+.+ .|+.++|+..|++.......
T Consensus 58 lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~-------- 129 (261)
T 3qky_A 58 LARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPN-------- 129 (261)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTT--------
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcC--------
Confidence 334577899999999999999753211222 3456677777778 99999999999998876321
Q ss_pred ccccccCCCChHhH-----------------HHHHHHHHhcCCHHHHHHHHHHHHhCC
Q 047498 143 VDRWKWSRPDVSVY-----------------TSLVQSLAASLKVSDALRLIDDISRVG 183 (566)
Q Consensus 143 i~~~rw~~PDVVTY-----------------NTLIdGLCKsGRVdEAlkLLeEM~~rG 183 (566)
+...+ -.+-..|-+.|+.++|+..|++..+..
T Consensus 130 ---------~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~ 178 (261)
T 3qky_A 130 ---------HELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAY 178 (261)
T ss_dssp ---------CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred ---------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHC
Confidence 11222 345667889999999999999998853
No 137
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=92.59 E-value=1.2 Score=39.72 Aligned_cols=112 Identities=14% Similarity=0.053 Sum_probs=72.9
Q ss_pred hHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCC-cc-cccc--
Q 047498 69 EEELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSE-NG-TLVD-- 144 (566)
Q Consensus 69 ~~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~Pdvv-TY-aLi~-- 144 (566)
.+.+=..+.+.|++++|...|++..+.. .-+...|..+-..+.+.|+.++|++.|++.... .|+.. .+ .+-.
T Consensus 57 ~~~lg~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--~P~~~~a~~~lg~~~ 132 (208)
T 3urz_A 57 ATELALAYKKNRNYDKAYLFYKELLQKA--PNNVDCLEACAEMQVCRGQEKDALRMYEKILQL--EADNLAANIFLGNYY 132 (208)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--CCCCHHHHHHHHHHH
Confidence 3446667888999999999999997532 125678899999999999999999999998865 34321 11 1100
Q ss_pred -------------cc-ccCCCChHh--HHHHHHHHHhcCCHHHHHHHHHHHHhCCCCC
Q 047498 145 -------------RW-KWSRPDVSV--YTSLVQSLAASLKVSDALRLIDDISRVGVSP 186 (566)
Q Consensus 145 -------------~~-rw~~PDVVT--YNTLIdGLCKsGRVdEAlkLLeEM~~rGcsP 186 (566)
.. +...|+-.- |.-+=.++...|+.++|+..|++..+ ..|
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~--l~P 188 (208)
T 3urz_A 133 YLTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVIL--RFP 188 (208)
T ss_dssp HHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTT--TSC
T ss_pred HHHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHH--hCC
Confidence 00 112333222 22223334456788888888888775 456
No 138
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=92.54 E-value=0.57 Score=44.20 Aligned_cols=121 Identities=13% Similarity=0.118 Sum_probs=84.1
Q ss_pred HHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCcccccccc------
Q 047498 73 LSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRW------ 146 (566)
Q Consensus 73 IrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~------ 146 (566)
-..+.+.|+.++|.+.|++..+.. .-+...+..|-..+.+.|+.++|..+|++.... .|+.....+..+.
T Consensus 124 a~~~~~~g~~~~A~~~~~~al~~~--P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~--~p~~~~~~~~~~~~l~~~~ 199 (287)
T 3qou_A 124 AMQLMQESNYTDALPLLXDAWQLS--NQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQ--DQDTRYQGLVAQIELLXQA 199 (287)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHT--TSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGG--GCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhC--CcchhHHHHHHHHHHHCCCHHHHHHHHHhCchh--hcchHHHHHHHHHHHHhhc
Confidence 345678999999999999997432 125567889999999999999999999987543 2322111110000
Q ss_pred cc------------CCC-ChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceec
Q 047498 147 KW------------SRP-DVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVR 197 (566)
Q Consensus 147 rw------------~~P-DVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~ 197 (566)
.. ..| |...+..|-..|-+.|+.++|+..|.++.+..-..++.-.+..+..
T Consensus 200 ~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~ 263 (287)
T 3qou_A 200 ADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQE 263 (287)
T ss_dssp TSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHH
T ss_pred ccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHH
Confidence 00 134 6888999999999999999999999999986432212344444444
No 139
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.54 E-value=0.71 Score=36.83 Aligned_cols=73 Identities=10% Similarity=-0.039 Sum_probs=60.6
Q ss_pred ChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCC----hHhHHHHHHHHHhcCCHHHHHHHH
Q 047498 101 TVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPD----VSVYTSLVQSLAASLKVSDALRLI 176 (566)
Q Consensus 101 DvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PD----VVTYNTLIdGLCKsGRVdEAlkLL 176 (566)
+...+..+-..+.+.|+.++|++.|++.... .|+ ...|..+-..+.+.|++++|++.+
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~------------------~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~ 88 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGL------------------DATPQDQAVLHRNRAACHLKLEDYDKAETEA 88 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTS------------------CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH------------------cccchHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 5667888899999999999999999998754 366 788999999999999999999999
Q ss_pred HHHHhCCCCCCCccccc
Q 047498 177 DDISRVGVSPGEEVPFG 193 (566)
Q Consensus 177 eEM~~rGcsPdDvVTYn 193 (566)
++..+. .|++...|.
T Consensus 89 ~~~~~~--~~~~~~~~~ 103 (148)
T 2dba_A 89 SKAIEK--DGGDVKALY 103 (148)
T ss_dssp HHHHHH--TSCCHHHHH
T ss_pred HHHHhh--CccCHHHHH
Confidence 998875 564433333
No 140
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=92.50 E-value=0.65 Score=47.00 Aligned_cols=30 Identities=7% Similarity=-0.094 Sum_probs=25.1
Q ss_pred hhhhHHHHHHHHhcCChhHHHHHHHHHHhc
Q 047498 102 VDECCLIINAAIDRGNTDLALSIFYAMRSS 131 (566)
Q Consensus 102 vvTYNsLI~GlCKaGrVDeAlsLF~EM~sr 131 (566)
...|+.+-..+.+.|+.++|++.|++....
T Consensus 97 ~~a~~~lg~~~~~~g~~~~Al~~~~~al~l 126 (382)
T 2h6f_A 97 RDVYDYFRAVLQRDERSERAFKLTRDAIEL 126 (382)
T ss_dssp HHHHHHHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCChHHHHHHHHHHHHh
Confidence 345777778888999999999999998864
No 141
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=92.48 E-value=1.1 Score=33.13 Aligned_cols=58 Identities=16% Similarity=0.086 Sum_probs=47.4
Q ss_pred HHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhc
Q 047498 72 LLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSS 131 (566)
Q Consensus 72 LIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~sr 131 (566)
+-..+.+.|++++|.+.|++..+.. .-+...|..+-..+.+.|+.++|++.|++....
T Consensus 15 la~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 15 LGNAYYKQGDYDEAIEYYQKALELD--PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (91)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 3455778999999999999987422 235667888999999999999999999998765
No 142
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=92.43 E-value=0.42 Score=39.73 Aligned_cols=80 Identities=16% Similarity=0.012 Sum_probs=62.3
Q ss_pred ChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHH
Q 047498 101 TVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDIS 180 (566)
Q Consensus 101 DvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~ 180 (566)
+...+..+-..+.+.|+.++|.+.|++...... -|...|..|-..+.+.|+.++|++.|++..
T Consensus 17 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p-----------------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 79 (142)
T 2xcb_A 17 TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDH-----------------YDARYFLGLGACRQSLGLYEQALQSYSYGA 79 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCC-----------------ccHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 344566677889999999999999999886532 367778888899999999999999999998
Q ss_pred hCCCCCCCcccccceeccc
Q 047498 181 RVGVSPGEEVPFGKVVRCP 199 (566)
Q Consensus 181 ~rGcsPdDvVTYntLI~C~ 199 (566)
.. .|++...|..+-.|+
T Consensus 80 ~~--~p~~~~~~~~lg~~~ 96 (142)
T 2xcb_A 80 LM--DINEPRFPFHAAECH 96 (142)
T ss_dssp HH--CTTCTHHHHHHHHHH
T ss_pred hc--CCCCcHHHHHHHHHH
Confidence 85 476555554444443
No 143
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=92.33 E-value=0.61 Score=47.31 Aligned_cols=84 Identities=10% Similarity=-0.006 Sum_probs=62.7
Q ss_pred CCCHH-------HHHHHHHHHhhcCCCCc-ChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCC
Q 047498 79 AKDAS-------EVLEIVAESSKRSGGVL-TVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSR 150 (566)
Q Consensus 79 AGrlD-------EAleLL~EM~er~Gg~P-DvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~ 150 (566)
.|+++ +|.++|++-.+ ...| +...|..+...+.+.|+.++|.++|++.....
T Consensus 292 ~g~~~~a~~~~~~A~~~~~~Al~--~~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~------------------ 351 (530)
T 2ooe_A 292 KGDMNNAKLFSDEAANIYERAIS--TLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIE------------------ 351 (530)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTT--TTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSS------------------
T ss_pred ccchhhhhhhhHHHHHHHHHHHH--HhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCcc------------------
Confidence 68887 89999999873 2234 46778889999999999999999999988642
Q ss_pred CC--hHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 151 PD--VSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 151 PD--VVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
|+ ...|..+..-+++.|++++|+++|++-.+.
T Consensus 352 p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~ 385 (530)
T 2ooe_A 352 DIDPTLVYIQYMKFARRAEGIKSGRMIFKKARED 385 (530)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 43 236777777777777777777777776654
No 144
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=92.31 E-value=0.52 Score=47.11 Aligned_cols=97 Identities=6% Similarity=-0.019 Sum_probs=76.9
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcC--------------CCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCc
Q 047498 74 SRVSGAKDASEVLEIVAESSKRS--------------GGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSEN 139 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~--------------Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvT 139 (566)
..+.+.|++++|++.+++..+.. -..-+...|+-+=.++.+.|+.++|++.|++......
T Consensus 231 ~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p------ 304 (370)
T 1ihg_A 231 NTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDP------ 304 (370)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCT------
T ss_pred HHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCc------
Confidence 46778999999999998876300 0112456788899999999999999999999886421
Q ss_pred cccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCc
Q 047498 140 GTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEE 189 (566)
Q Consensus 140 YaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDv 189 (566)
-+...|..+=..|.+.|+.++|++.|++..+. .|++.
T Consensus 305 -----------~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l--~P~~~ 341 (370)
T 1ihg_A 305 -----------SNTKALYRRAQGWQGLKEYDQALADLKKAQEI--APEDK 341 (370)
T ss_dssp -----------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCH
T ss_pred -----------hhHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--CCCCH
Confidence 36778899999999999999999999998874 56443
No 145
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=92.14 E-value=0.62 Score=47.24 Aligned_cols=61 Identities=10% Similarity=-0.117 Sum_probs=50.3
Q ss_pred hhHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcC--hhhhHHHHHHHHhcCChhHHHHHHHHHHhc
Q 047498 68 VEEELLSRVSGAKDASEVLEIVAESSKRSGGVLT--VDECCLIINAAIDRGNTDLALSIFYAMRSS 131 (566)
Q Consensus 68 ~~~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PD--vvTYNsLI~GlCKaGrVDeAlsLF~EM~sr 131 (566)
+-..+..-+.+.|+.++|.++|++..+. .|+ ...|+.+...+.+.|+.++|.++|++-...
T Consensus 323 l~~~~~~~~~~~g~~~~A~~~~~~al~~---~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~ 385 (530)
T 2ooe_A 323 LYFAYADYEESRMKYEKVHSIYNRLLAI---EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKARED 385 (530)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHS---SSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhCc---cccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 4456677778899999999999999852 244 247999999999999999999999998754
No 146
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=92.11 E-value=0.94 Score=36.13 Aligned_cols=80 Identities=10% Similarity=-0.107 Sum_probs=64.1
Q ss_pred cChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHH
Q 047498 100 LTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDI 179 (566)
Q Consensus 100 PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM 179 (566)
.+...|..+-..+.+.|+.++|+..|++...... -+...|..+-..+.+.|+.++|++.|++.
T Consensus 7 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~-----------------~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 69 (137)
T 3q49_B 7 PSAQELKEQGNRLFVGRKYPEAAACYGRAITRNP-----------------LVAVYYTNRALCYLKMQQPEQALADCRRA 69 (137)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCc-----------------CcHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 4677889999999999999999999999876532 35788999999999999999999999999
Q ss_pred HhCCCCCCCcccccceecc
Q 047498 180 SRVGVSPGEEVPFGKVVRC 198 (566)
Q Consensus 180 ~~rGcsPdDvVTYntLI~C 198 (566)
.+. .|++...|..+-.+
T Consensus 70 l~~--~p~~~~~~~~l~~~ 86 (137)
T 3q49_B 70 LEL--DGQSVKAHFFLGQC 86 (137)
T ss_dssp HHH--CTTCHHHHHHHHHH
T ss_pred HHh--CchhHHHHHHHHHH
Confidence 885 46544444444333
No 147
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=92.03 E-value=2.3 Score=38.37 Aligned_cols=82 Identities=15% Similarity=0.110 Sum_probs=47.1
Q ss_pred CCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHh----cCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChH
Q 047498 79 AKDASEVLEIVAESSKRSGGVLTVDECCLIINAAID----RGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVS 154 (566)
Q Consensus 79 AGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCK----aGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVV 154 (566)
.++.++|++.|.+..+ .+ +...|+.|=..|.+ .|+.++|++.|++....+ +..
T Consensus 55 ~~~~~~A~~~~~~a~~-~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~-------------------~~~ 111 (273)
T 1ouv_A 55 EKNLKKAASFYAKACD-LN---YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK-------------------YAE 111 (273)
T ss_dssp CCCHHHHHHHHHHHHH-TT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT-------------------CHH
T ss_pred CCCHHHHHHHHHHHHH-CC---CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC-------------------Ccc
Confidence 6677777777776654 22 45556666666666 677777777776665543 233
Q ss_pred hHHHHHHHHHh----cCCHHHHHHHHHHHHhCC
Q 047498 155 VYTSLVQSLAA----SLKVSDALRLIDDISRVG 183 (566)
Q Consensus 155 TYNTLIdGLCK----sGRVdEAlkLLeEM~~rG 183 (566)
.|+.|-..+-+ .|+.++|++.|++-.+.|
T Consensus 112 a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~ 144 (273)
T 1ouv_A 112 GCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN 144 (273)
T ss_dssp HHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC
Confidence 44444444444 555555555555555544
No 148
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=91.92 E-value=1.7 Score=40.45 Aligned_cols=97 Identities=7% Similarity=0.009 Sum_probs=70.4
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhhcCCCCcC----hhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCcccccccc
Q 047498 71 ELLSRVSGAKDASEVLEIVAESSKRSGGVLT----VDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRW 146 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~er~Gg~PD----vvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~ 146 (566)
..+..+...|+.++|++.+.+..+.....++ ...|..+-..+...|+.++|++.|++.......
T Consensus 80 ~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~------------ 147 (293)
T 2qfc_A 80 DQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLT------------ 147 (293)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCC------------
T ss_pred HHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhc------------
Confidence 3567788999999999999887642211111 122444556678889999999999987753221
Q ss_pred ccCCCC--hHhHHHHHHHHHhcCCHHHHHHHHHHHH
Q 047498 147 KWSRPD--VSVYTSLVQSLAASLKVSDALRLIDDIS 180 (566)
Q Consensus 147 rw~~PD--VVTYNTLIdGLCKsGRVdEAlkLLeEM~ 180 (566)
...+. ..+|+.+-..|.+.|+.++|++.|++..
T Consensus 148 -~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal 182 (293)
T 2qfc_A 148 -GIDVYQNLYIENAIANIYAENGYLKKGIDLFEQIL 182 (293)
T ss_dssp -SSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred -CCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 00122 4589999999999999999999999887
No 149
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=91.85 E-value=2.1 Score=38.60 Aligned_cols=87 Identities=11% Similarity=0.019 Sum_probs=72.7
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHh----cCChhHHHHHHHHHHhcCCCCCCCccccccccccC
Q 047498 74 SRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAID----RGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWS 149 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCK----aGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~ 149 (566)
..+.+.|+.++|++.|++..+ .+ +..++..|-..+.+ .|+.++|++.|++-...+
T Consensus 14 ~~~~~~~~~~~A~~~~~~a~~-~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~----------------- 72 (273)
T 1ouv_A 14 AKSYKEKDFTQAKKYFEKACD-LK---ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN----------------- 72 (273)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH-TT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT-----------------
T ss_pred HHHHhCCCHHHHHHHHHHHHH-CC---CHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC-----------------
Confidence 446678999999999999985 32 45678888888999 999999999999987653
Q ss_pred CCChHhHHHHHHHHHh----cCCHHHHHHHHHHHHhCC
Q 047498 150 RPDVSVYTSLVQSLAA----SLKVSDALRLIDDISRVG 183 (566)
Q Consensus 150 ~PDVVTYNTLIdGLCK----sGRVdEAlkLLeEM~~rG 183 (566)
+...|..|-..+.+ .++.++|++.|++..+.|
T Consensus 73 --~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~ 108 (273)
T 1ouv_A 73 --YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK 108 (273)
T ss_dssp --CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred --CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC
Confidence 45677778788888 999999999999998875
No 150
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=91.66 E-value=0.95 Score=38.84 Aligned_cols=80 Identities=11% Similarity=0.048 Sum_probs=59.5
Q ss_pred HHHHHHHHHhhcCCCCc-ChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHHHHHHH
Q 047498 84 EVLEIVAESSKRSGGVL-TVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQS 162 (566)
Q Consensus 84 EAleLL~EM~er~Gg~P-DvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYNTLIdG 162 (566)
+|.+.|++..+.. | |...+..+-..+.+.|+.++|.+.|+++.+.... ..|...+..|...
T Consensus 92 ~a~~~~~~al~~~---P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~---------------~~~~~a~~~l~~~ 153 (176)
T 2r5s_A 92 PELKRLEQELAAN---PDNFELACELAVQYNQVGRDEEALELLWNILKVNLG---------------AQDGEVKKTFMDI 153 (176)
T ss_dssp HHHHHHHHHHHHS---TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT---------------TTTTHHHHHHHHH
T ss_pred hHHHHHHHHHHhC---CCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcc---------------cChHHHHHHHHHH
Confidence 4566666665321 3 4567778888888889999999988888765321 1246689999999
Q ss_pred HHhcCCHHHHHHHHHHHHh
Q 047498 163 LAASLKVSDALRLIDDISR 181 (566)
Q Consensus 163 LCKsGRVdEAlkLLeEM~~ 181 (566)
|-+.|+.++|...|++...
T Consensus 154 ~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 154 LSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HHHHCSSCHHHHHHHHHHH
T ss_pred HHHhCCCCcHHHHHHHHHH
Confidence 9999999999999987654
No 151
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=91.19 E-value=0.87 Score=38.37 Aligned_cols=80 Identities=15% Similarity=0.050 Sum_probs=64.2
Q ss_pred cChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHH
Q 047498 100 LTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDI 179 (566)
Q Consensus 100 PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM 179 (566)
.+...|..+-..+.+.|+.++|++.|++...... -|...|..+-..|.+.|+.++|++.|++.
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p-----------------~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 71 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAP-----------------ANPIYLSNRAAAYSASGQHEKAAEDAELA 71 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-----------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----------------cCHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 3566788888999999999999999999876532 37788999999999999999999999999
Q ss_pred HhCCCCCCCcccccceecc
Q 047498 180 SRVGVSPGEEVPFGKVVRC 198 (566)
Q Consensus 180 ~~rGcsPdDvVTYntLI~C 198 (566)
.+. .|++...|..+-.+
T Consensus 72 l~~--~p~~~~~~~~lg~~ 88 (164)
T 3sz7_A 72 TVV--DPKYSKAWSRLGLA 88 (164)
T ss_dssp HHH--CTTCHHHHHHHHHH
T ss_pred HHh--CCCCHHHHHHHHHH
Confidence 885 47554444444333
No 152
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=90.87 E-value=1.2 Score=35.69 Aligned_cols=75 Identities=13% Similarity=0.115 Sum_probs=60.1
Q ss_pred hhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 047498 102 VDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISR 181 (566)
Q Consensus 102 vvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~ 181 (566)
...|..+=..+.+.|+.++|++.|++..+..- -|...|.-+-..+.+.|+.++|++.|++..+
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p-----------------~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 66 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAP-----------------EDARGYSNRAAALAKLMSFPEAIADCNKAIE 66 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC-----------------CChHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 34567777889999999999999999876532 4678899999999999999999999999988
Q ss_pred CCCCCCCcccccce
Q 047498 182 VGVSPGEEVPFGKV 195 (566)
Q Consensus 182 rGcsPdDvVTYntL 195 (566)
. .|++...|..+
T Consensus 67 ~--~p~~~~~~~~l 78 (126)
T 3upv_A 67 K--DPNFVRAYIRK 78 (126)
T ss_dssp H--CTTCHHHHHHH
T ss_pred h--CCCcHHHHHHH
Confidence 5 57554444433
No 153
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=90.76 E-value=1.2 Score=41.12 Aligned_cols=94 Identities=15% Similarity=-0.010 Sum_probs=69.7
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcCCCCcC-------------hhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCcc
Q 047498 74 SRVSGAKDASEVLEIVAESSKRSGGVLT-------------VDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENG 140 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~Gg~PD-------------vvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTY 140 (566)
..+.+.|++++|++.|++-.+- .|+ ...|+-+=.++.+.|+.++|+..|++-....
T Consensus 19 ~~l~~~g~~eeAi~~Y~kAL~l---~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~-------- 87 (159)
T 2hr2_A 19 QRQLVAGEYDEAAANCRRAMEI---SHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYF-------- 87 (159)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHH---HTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH--------
T ss_pred HHHHHCCCHHHHHHHHHHHHhh---CCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhh--------
Confidence 3467899999999999988642 133 2378888999999999999999999876530
Q ss_pred ccccccccCCCC-hHhH----HHHHHHHHhcCCHHHHHHHHHHHHh
Q 047498 141 TLVDRWKWSRPD-VSVY----TSLVQSLAASLKVSDALRLIDDISR 181 (566)
Q Consensus 141 aLi~~~rw~~PD-VVTY----NTLIdGLCKsGRVdEAlkLLeEM~~ 181 (566)
..... ..|| .-.| +-.=..|.+.||.++|+.-|++-.+
T Consensus 88 --n~~~e-~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAle 130 (159)
T 2hr2_A 88 --NRRGE-LNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVE 130 (159)
T ss_dssp --HHHCC-TTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred --hcccc-CCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHh
Confidence 00000 0253 3455 7777889999999999999998765
No 154
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=90.65 E-value=0.68 Score=40.30 Aligned_cols=94 Identities=13% Similarity=0.018 Sum_probs=64.5
Q ss_pred HHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCC
Q 047498 72 LLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRP 151 (566)
Q Consensus 72 LIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~P 151 (566)
+-..+.+.|++++|++.+.+..+. ..-+...|..+-..+.+.|+.++|++.|++.....- -
T Consensus 94 la~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p-----------------~ 154 (198)
T 2fbn_A 94 LATCYNKNKDYPKAIDHASKVLKI--DKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNP-----------------N 154 (198)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH--STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHST-----------------T
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHh--CcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCC-----------------C
Confidence 445567899999999999998752 223567888899999999999999999999876531 2
Q ss_pred ChHhHHHHHHHHHhcCCHHHHH-HHHHHHHhCCC
Q 047498 152 DVSVYTSLVQSLAASLKVSDAL-RLIDDISRVGV 184 (566)
Q Consensus 152 DVVTYNTLIdGLCKsGRVdEAl-kLLeEM~~rGc 184 (566)
|...+..|-..+.+.++.+++. +.+..|..+|.
T Consensus 155 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~~ 188 (198)
T 2fbn_A 155 NLDIRNSYELCVNKLKEARKKDKLTFGGMFDKGP 188 (198)
T ss_dssp CHHHHHHHHHHHHHHHHHHC--------------
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 5667888888888888888887 67777766654
No 155
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=90.60 E-value=1.5 Score=47.17 Aligned_cols=100 Identities=12% Similarity=0.060 Sum_probs=78.6
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHh--------hcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCcccc
Q 047498 71 ELLSRVSGAKDASEVLEIVAESS--------KRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTL 142 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~--------er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaL 142 (566)
.++.+ ...|+.++|++.|++.. +. ..-+...|..+-..+.+.|+.++|++.|++..+..-
T Consensus 397 ~~~~a-~~~~~~~~A~~~~~~al~~~~~~~~~~--~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p--------- 464 (681)
T 2pzi_A 397 SVLQA-TVLSQPVQTLDSLRAARHGALDADGVD--FSESVELPLMEVRALLDLGDVAKATRKLDDLAERVG--------- 464 (681)
T ss_dssp HHHHH-TTTCCHHHHHHHHHHHHTC-------C--CTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC---------
T ss_pred HHhhc-ccccCHHHHHHHHHHhhhhcccccccc--cccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCc---------
Confidence 34444 78999999999999987 31 123556788888999999999999999999886532
Q ss_pred ccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccc
Q 047498 143 VDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPF 192 (566)
Q Consensus 143 i~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTY 192 (566)
-|...|+.+=..|.+.|+.++|++.|++..+. .|++.-.|
T Consensus 465 --------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l--~P~~~~~~ 504 (681)
T 2pzi_A 465 --------WRWRLVWYRAVAELLTGDYDSATKHFTEVLDT--FPGELAPK 504 (681)
T ss_dssp --------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--STTCSHHH
T ss_pred --------chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCChHHH
Confidence 36678888888999999999999999998874 57543333
No 156
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=90.52 E-value=1.4 Score=42.28 Aligned_cols=96 Identities=9% Similarity=-0.080 Sum_probs=72.1
Q ss_pred HHHHHHcCCCHHHHHHHHHHHhhc---CCC-CcChhhhHHHHHHHHhcCChhHHHHHHHHHHhc----CCCCCCCccccc
Q 047498 72 LLSRVSGAKDASEVLEIVAESSKR---SGG-VLTVDECCLIINAAIDRGNTDLALSIFYAMRSS----FDQGLSENGTLV 143 (566)
Q Consensus 72 LIrGLCKAGrlDEAleLL~EM~er---~Gg-~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~sr----G~~PdvvTYaLi 143 (566)
+=..+...|++++|.+.|.+..+. .+. .....+|+.|=..+.+.|+.++|++.|++-... +..
T Consensus 190 lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~--------- 260 (383)
T 3ulq_A 190 FATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNIL--------- 260 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCG---------
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccc---------
Confidence 335677789999999999887521 111 111247888999999999999999999987652 110
Q ss_pred cccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 144 DRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 144 ~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
.-...+|+.|-..+.+.|+.++|.+.+++..+.
T Consensus 261 ------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 293 (383)
T 3ulq_A 261 ------PSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAY 293 (383)
T ss_dssp ------GGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ------hhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 123667899999999999999999999987653
No 157
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=90.40 E-value=0.96 Score=37.68 Aligned_cols=78 Identities=14% Similarity=0.103 Sum_probs=61.0
Q ss_pred hhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 103 DECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 103 vTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
..|+-+=+.|.+.|+.++|++.|++..+... -|...|.-+-..|.+.|+.++|++.|++.++.
T Consensus 14 ~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p-----------------~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 76 (126)
T 4gco_A 14 QEEKNKGNEYFKKGDYPTAMRHYNEAVKRDP-----------------ENAILYSNRAACLTKLMEFQRALDDCDTCIRL 76 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----------------CCHHHHHHHhhHHHhhccHHHHHHHHHHHHHh
Confidence 3455566789999999999999999876532 47888999999999999999999999998874
Q ss_pred CCCCCCcccccceeccc
Q 047498 183 GVSPGEEVPFGKVVRCP 199 (566)
Q Consensus 183 GcsPdDvVTYntLI~C~ 199 (566)
.|++.-.|..+-.++
T Consensus 77 --~p~~~~a~~~lg~~~ 91 (126)
T 4gco_A 77 --DSKFIKGYIRKAACL 91 (126)
T ss_dssp --CTTCHHHHHHHHHHH
T ss_pred --hhhhhHHHHHHHHHH
Confidence 575555554444333
No 158
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=90.32 E-value=0.83 Score=48.38 Aligned_cols=98 Identities=5% Similarity=-0.105 Sum_probs=75.4
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhc----CCC-CcCh-hhhHHHHHHHHhcCChhHHHHHHHHHHhc-----CCCCCCC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKR----SGG-VLTV-DECCLIINAAIDRGNTDLALSIFYAMRSS-----FDQGLSE 138 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er----~Gg-~PDv-vTYNsLI~GlCKaGrVDeAlsLF~EM~sr-----G~~Pdvv 138 (566)
+.|-.-|...|++++|..++.+..+- .|. .|++ .+||-|=..|...|+.++|..+|++-..- |-.
T Consensus 355 ~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~---- 430 (490)
T 3n71_A 355 SIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPS---- 430 (490)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT----
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCC----
Confidence 35566778899999999998876411 233 5665 66899999999999999999999985532 322
Q ss_pred ccccccccccCCCChH-hHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 139 NGTLVDRWKWSRPDVS-VYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 139 TYaLi~~~rw~~PDVV-TYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
+|++. +++.|-..+-+.|+.++|..++.+|+++
T Consensus 431 -----------Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~ 464 (490)
T 3n71_A 431 -----------HPITKDLEAMRMQTEMELRMFRQNEFMYHKMREA 464 (490)
T ss_dssp -----------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56654 5677777888899999999999999874
No 159
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=90.14 E-value=1.8 Score=40.84 Aligned_cols=98 Identities=7% Similarity=-0.105 Sum_probs=67.6
Q ss_pred HHHHHHcCCCHHHHHHHHHHHhhc---CCCC--cC-hhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccc
Q 047498 72 LLSRVSGAKDASEVLEIVAESSKR---SGGV--LT-VDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDR 145 (566)
Q Consensus 72 LIrGLCKAGrlDEAleLL~EM~er---~Gg~--PD-vvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~ 145 (566)
+-..+...|++++|.+.+++..+. .+.. |. ...++.+-..+...|+.++|..+|++.....-.. +
T Consensus 99 la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~---------~ 169 (373)
T 1hz4_A 99 QSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSY---------Q 169 (373)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTS---------C
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcc---------C
Confidence 444566789999998888877521 1221 22 3456667778889999999999998876542210 0
Q ss_pred cccCCC-ChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 146 WKWSRP-DVSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 146 ~rw~~P-DVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
.+ ...+|..+-..+.+.|+.++|...+++....
T Consensus 170 ----~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~ 203 (373)
T 1hz4_A 170 ----PQQQLQCLAMLIQCSLARGDLDNARSQLNRLENL 203 (373)
T ss_dssp ----GGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred ----cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 01 2457888888889999999999999887654
No 160
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=90.05 E-value=0.89 Score=36.48 Aligned_cols=61 Identities=8% Similarity=0.000 Sum_probs=49.6
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSF 132 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG 132 (566)
..|-..+.+.|++++|++.|++..+.. .-+...|..+-.++.+.|+.++|++.|++.....
T Consensus 31 ~~lg~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 91 (117)
T 3k9i_A 31 LGLGSTFRTLGEYRKAEAVLANGVKQF--PNHQALRVFYAMVLYNLGRYEQGVELLLKIIAET 91 (117)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhC--CCchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 345566778999999999999997532 1246678889999999999999999999987653
No 161
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=89.60 E-value=0.73 Score=35.25 Aligned_cols=57 Identities=18% Similarity=0.116 Sum_probs=46.4
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcCCCCcChh-hhHHHHHHHHhcCChhHHHHHHHHHHhcC
Q 047498 74 SRVSGAKDASEVLEIVAESSKRSGGVLTVD-ECCLIINAAIDRGNTDLALSIFYAMRSSF 132 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~Gg~PDvv-TYNsLI~GlCKaGrVDeAlsLF~EM~srG 132 (566)
..+.+.|++++|++.|++..+.. .-+.. .|..+=..+.+.|+.++|++.|++.....
T Consensus 8 ~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 65 (99)
T 2kc7_A 8 KELINQGDIENALQALEEFLQTE--PVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELN 65 (99)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHC--SSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCHHHHHHHHHHHHHHC--CCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 35678899999999999997532 12456 78888889999999999999999988664
No 162
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=89.07 E-value=2 Score=35.49 Aligned_cols=63 Identities=11% Similarity=0.051 Sum_probs=53.1
Q ss_pred hhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 103 DECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 103 vTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
.+|.-|=+.+.+.|+.++|++.|++...... -|...|+-+=..|.+.|+.++|++.|++..+-
T Consensus 9 ~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p-----------------~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~ 71 (127)
T 4gcn_A 9 IAEKDLGNAAYKQKDFEKAHVHYDKAIELDP-----------------SNITFYNNKAAVYFEEKKFAECVQFCEKAVEV 71 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----------------CCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 4566677789999999999999999876421 35778999999999999999999999988764
No 163
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=88.97 E-value=1.6 Score=33.36 Aligned_cols=65 Identities=14% Similarity=0.124 Sum_probs=51.9
Q ss_pred HHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChH-hHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCC
Q 047498 108 IINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVS-VYTSLVQSLAASLKVSDALRLIDDISRVGVSP 186 (566)
Q Consensus 108 LI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVV-TYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsP 186 (566)
.-..+.+.|+.++|++.|++..+... -|.. .|..+=..+.+.|+.++|++.|++..+. .|
T Consensus 6 ~a~~~~~~~~~~~A~~~~~~al~~~p-----------------~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~--~p 66 (99)
T 2kc7_A 6 TIKELINQGDIENALQALEEFLQTEP-----------------VGKDEAYYLMGNAYRKLGDWQKALNNYQSAIEL--NP 66 (99)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCS-----------------STHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--CT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCC-----------------CcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--CC
Confidence 34567899999999999999886532 3456 7888888999999999999999999875 46
Q ss_pred CCccc
Q 047498 187 GEEVP 191 (566)
Q Consensus 187 dDvVT 191 (566)
++.-.
T Consensus 67 ~~~~~ 71 (99)
T 2kc7_A 67 DSPAL 71 (99)
T ss_dssp TSTHH
T ss_pred CcHHH
Confidence 44333
No 164
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=88.65 E-value=1.4 Score=41.58 Aligned_cols=96 Identities=9% Similarity=0.035 Sum_probs=64.5
Q ss_pred HHHcCCCHHHHHHHHHHHhhc---CCCC-cChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCC
Q 047498 75 RVSGAKDASEVLEIVAESSKR---SGGV-LTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSR 150 (566)
Q Consensus 75 GLCKAGrlDEAleLL~EM~er---~Gg~-PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~ 150 (566)
-+.+ |++++|++.|++..+- .+.. -...+|+-+-..+.+.|+.++|++.|++....-.. .. . .
T Consensus 125 ~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~---------~~--~-~ 191 (307)
T 2ifu_A 125 LMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKE---------ME--N-Y 191 (307)
T ss_dssp HHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH---------TT--C-H
T ss_pred HHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH---------cC--C-h
Confidence 3455 9999999998877521 1110 01456788888999999999999999987653110 00 0 1
Q ss_pred CCh-HhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCC
Q 047498 151 PDV-SVYTSLVQSLAASLKVSDALRLIDDISRVGVSP 186 (566)
Q Consensus 151 PDV-VTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsP 186 (566)
++. .+|..+...+.+.|+.++|++.|++.. ..|
T Consensus 192 ~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al---~~p 225 (307)
T 2ifu_A 192 PTCYKKCIAQVLVQLHRADYVAAQKCVRESY---SIP 225 (307)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT---TST
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh---CCC
Confidence 112 255555556666699999999999987 566
No 165
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=88.22 E-value=2.6 Score=40.32 Aligned_cols=97 Identities=4% Similarity=-0.007 Sum_probs=70.6
Q ss_pred HHcCCCHHHHHHHHHHHhhcCCCCc----ChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCC
Q 047498 76 VSGAKDASEVLEIVAESSKRSGGVL----TVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRP 151 (566)
Q Consensus 76 LCKAGrlDEAleLL~EM~er~Gg~P----DvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~P 151 (566)
+...|++++|++.|.+..+.....+ ...+|+.+=..+...|+.++|++.|++-....-+ ... ....
T Consensus 113 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~--------~~~--~~~~ 182 (383)
T 3ulq_A 113 ELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKE--------HEA--YNIR 182 (383)
T ss_dssp HHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT--------CST--THHH
T ss_pred HHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh--------Ccc--chHH
Confidence 4678999999999999863211112 3467888999999999999999999987643211 000 0011
Q ss_pred ChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 152 DVSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 152 DVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
...+|+.|=..+.+.|+.++|++.|++..+.
T Consensus 183 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 213 (383)
T 3ulq_A 183 LLQCHSLFATNFLDLKQYEDAISHFQKAYSM 213 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 2567888989999999999999999887653
No 166
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=88.15 E-value=2.1 Score=41.12 Aligned_cols=98 Identities=12% Similarity=0.036 Sum_probs=73.9
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhhc---CCC-CcChhhhHHHHHHHHhcCChhHHHHHHHHHHhc----CCCCCCCcccc
Q 047498 71 ELLSRVSGAKDASEVLEIVAESSKR---SGG-VLTVDECCLIINAAIDRGNTDLALSIFYAMRSS----FDQGLSENGTL 142 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~er---~Gg-~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~sr----G~~PdvvTYaL 142 (566)
.|=..+...|++++|.+.|.+..+. .+. .....+|+-|=..+.+.|+.++|++.|++-... +.
T Consensus 187 ~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~--------- 257 (378)
T 3q15_A 187 VIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVP--------- 257 (378)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCG---------
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCC---------
Confidence 3445567799999999999877531 111 112356788888999999999999999987652 11
Q ss_pred ccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCC
Q 047498 143 VDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGV 184 (566)
Q Consensus 143 i~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGc 184 (566)
.-...+|..|-..+.+.|+.++|.+.+++.....-
T Consensus 258 -------~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 292 (378)
T 3q15_A 258 -------DLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHIT 292 (378)
T ss_dssp -------GGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred -------hhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 12367888999999999999999999999877543
No 167
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=87.77 E-value=1.7 Score=43.37 Aligned_cols=63 Identities=13% Similarity=-0.088 Sum_probs=40.3
Q ss_pred hHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChH--hHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 105 CCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVS--VYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 105 YNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVV--TYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
|..|=.++.+.|+.++|++.|++-..... .|... ....+-..|.+.|+.++|..+|+++...
T Consensus 174 ~~~LG~al~~LG~~~eAl~~l~~a~~g~~----------------~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~ 237 (282)
T 4f3v_A 174 GVAHGVAAANLALFTEAERRLTEANDSPA----------------GEACARAIAWYLAMARRSQGNESAAVALLEWLQTT 237 (282)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTSTT----------------TTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHhcCCC----------------CccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 44444455556666666666665542211 15422 4455666788999999999999999886
Q ss_pred C
Q 047498 183 G 183 (566)
Q Consensus 183 G 183 (566)
.
T Consensus 238 ~ 238 (282)
T 4f3v_A 238 H 238 (282)
T ss_dssp S
T ss_pred C
Confidence 3
No 168
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=87.69 E-value=6.2 Score=40.05 Aligned_cols=106 Identities=15% Similarity=0.161 Sum_probs=76.5
Q ss_pred cchhHHHHHHHHc-------CCCHHHHHHHHHHHhhcCCC--CcChh------------------hhHHHHHHHHhcCCh
Q 047498 66 GVVEEELLSRVSG-------AKDASEVLEIVAESSKRSGG--VLTVD------------------ECCLIINAAIDRGNT 118 (566)
Q Consensus 66 ~~~~~aLIrGLCK-------AGrlDEAleLL~EM~er~Gg--~PDvv------------------TYNsLI~GlCKaGrV 118 (566)
.++|-.....+++ +|+.++|.+.+++......| .++.. +...++..+.+.|+.
T Consensus 108 ~~~D~~~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~ 187 (388)
T 2ff4_A 108 NTCDLGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRA 187 (388)
T ss_dssp GGBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred ccchHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
Confidence 4566544444443 57888999998887543333 33331 113466777889999
Q ss_pred hHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC-----CCCCCC
Q 047498 119 DLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRV-----GVSPGE 188 (566)
Q Consensus 119 DeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r-----GcsPdD 188 (566)
++|+..++.....- .-|--.|-.||..|.+.|+..+|++.|++..+. |+.|+.
T Consensus 188 ~~a~~~l~~~~~~~-----------------P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~~ 245 (388)
T 2ff4_A 188 SAVIAELEALTFEH-----------------PYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGP 245 (388)
T ss_dssp HHHHHHHHHHHHHS-----------------TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCH
T ss_pred HHHHHHHHHHHHhC-----------------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCCH
Confidence 99999888886542 137778999999999999999999999987663 999963
No 169
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=87.59 E-value=1.6 Score=41.16 Aligned_cols=97 Identities=9% Similarity=0.029 Sum_probs=61.7
Q ss_pred HHHHHcCCCHHHHHHHHHHHhhc--CCCCcC--hhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCcccccccccc
Q 047498 73 LSRVSGAKDASEVLEIVAESSKR--SGGVLT--VDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKW 148 (566)
Q Consensus 73 IrGLCKAGrlDEAleLL~EM~er--~Gg~PD--vvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw 148 (566)
-..|.+.|++++|++.|++-.+- ..+.++ ..+|+-|=..|.+ |+.++|++.|++-....-. ...
T Consensus 83 g~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~-----------~~~ 150 (307)
T 2ifu_A 83 GMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFEN-----------EER 150 (307)
T ss_dssp HHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHH-----------TTC
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHh-----------CCC
Confidence 34455678888888777765321 111121 3455666666666 8888888888775532100 000
Q ss_pred CCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 047498 149 SRPDVSVYTSLVQSLAASLKVSDALRLIDDISR 181 (566)
Q Consensus 149 ~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~ 181 (566)
..--..+|+-|-..|.+.|+.++|++.|++..+
T Consensus 151 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 183 (307)
T 2ifu_A 151 LRQAAELIGKASRLLVRQQKFDEAAASLQKEKS 183 (307)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 000146788899999999999999999998876
No 170
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=87.34 E-value=0.95 Score=42.71 Aligned_cols=95 Identities=8% Similarity=-0.033 Sum_probs=65.7
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhhcCC--------------------------------CCcChhhhHHHHHHHHhcCCh
Q 047498 71 ELLSRVSGAKDASEVLEIVAESSKRSG--------------------------------GVLTVDECCLIINAAIDRGNT 118 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~er~G--------------------------------g~PDvvTYNsLI~GlCKaGrV 118 (566)
.|-.-+.+.|+.++|.+.|++...... ..-|...+..|-..+.+.|+.
T Consensus 156 ~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~ 235 (287)
T 3qou_A 156 LLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRN 235 (287)
T ss_dssp HHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccH
Confidence 455667788999999888877642100 112344556666677777777
Q ss_pred hHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHH
Q 047498 119 DLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDIS 180 (566)
Q Consensus 119 DeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~ 180 (566)
++|+..|.+..+.... ..|...+..|..-|-..|+.++|...+++-.
T Consensus 236 ~~A~~~l~~~l~~~p~---------------~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al 282 (287)
T 3qou_A 236 EEALELLFGHLRXDLT---------------AADGQTRXTFQEILAALGTGDALASXYRRQL 282 (287)
T ss_dssp HHHHHHHHHHHHHCTT---------------GGGGHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccc---------------cccchHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 7777777777655321 1236789999999999999999999887643
No 171
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=87.30 E-value=1 Score=46.53 Aligned_cols=89 Identities=7% Similarity=-0.075 Sum_probs=64.2
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWS 149 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~ 149 (566)
..+-..+.+.|++++|++.+++..+. ..-+...|+.+=..|.+.|+.++|++.|++..+..-.
T Consensus 44 ~~lg~~~~~~g~~~~A~~~~~~al~l--~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~--------------- 106 (477)
T 1wao_1 44 GNRSLAYLRTECYGYALGDATRAIEL--DKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPH--------------- 106 (477)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHS--CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT---------------
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---------------
Confidence 34556678899999999999999752 2235678899999999999999999999998765321
Q ss_pred CCChHhHHHHHHH--HHhcCCHHHHHHHHH
Q 047498 150 RPDVSVYTSLVQS--LAASLKVSDALRLID 177 (566)
Q Consensus 150 ~PDVVTYNTLIdG--LCKsGRVdEAlkLLe 177 (566)
.++ .+..+-.. +.+.|+.++|+++++
T Consensus 107 ~~~--~~~~l~~~~~~~~~g~~~~A~~~~~ 134 (477)
T 1wao_1 107 DKD--AKMKYQECNKIVKQKAFERAIAGDE 134 (477)
T ss_dssp CTT--HHHHHHHHHHHHHHHHHCCC-----
T ss_pred CHH--HHHHHHHHHHHHHHHHHHHHhcccc
Confidence 233 34444444 888999999999988
No 172
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=87.22 E-value=3.1 Score=39.91 Aligned_cols=96 Identities=10% Similarity=0.026 Sum_probs=69.5
Q ss_pred HHcCCCHHHHHHHHHHHhhcCCCCcC----hhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCC
Q 047498 76 VSGAKDASEVLEIVAESSKRSGGVLT----VDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRP 151 (566)
Q Consensus 76 LCKAGrlDEAleLL~EM~er~Gg~PD----vvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~P 151 (566)
+...|+.++|++.|.+..+.....+| ...|+.|=..+...|+.++|++.|++-....-. ... ...-
T Consensus 111 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~--------~~~--~~~~ 180 (378)
T 3q15_A 111 EFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQN--------HPL--YSIR 180 (378)
T ss_dssp HHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT--------STT--CHHH
T ss_pred HHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHh--------CCC--chhh
Confidence 35799999999999998632111122 457788889999999999999999987643110 000 0001
Q ss_pred ChHhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 047498 152 DVSVYTSLVQSLAASLKVSDALRLIDDISR 181 (566)
Q Consensus 152 DVVTYNTLIdGLCKsGRVdEAlkLLeEM~~ 181 (566)
...+|+.|=..+.+.|+.++|.+.|++-.+
T Consensus 181 ~~~~~~~lg~~y~~~~~~~~A~~~~~~al~ 210 (378)
T 3q15_A 181 TIQSLFVIAGNYDDFKHYDKALPHLEAALE 210 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 256788888999999999999999987765
No 173
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=86.92 E-value=5 Score=37.83 Aligned_cols=96 Identities=7% Similarity=-0.073 Sum_probs=67.5
Q ss_pred HHHcCCCHHHHHHHHHHHhhcCCCCcCh----hhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCC
Q 047498 75 RVSGAKDASEVLEIVAESSKRSGGVLTV----DECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSR 150 (566)
Q Consensus 75 GLCKAGrlDEAleLL~EM~er~Gg~PDv----vTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~ 150 (566)
-+...|++++|.+.+++..... ...+. ..++.+-..+...|+.++|.+.|++.....-. .+ ...
T Consensus 23 ~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~---------~~--~~~ 90 (373)
T 1hz4_A 23 VAINDGNPDEAERLAKLALEEL-PPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQ---------HD--VWH 90 (373)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTC-CTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH---------TT--CHH
T ss_pred HHHHCCCHHHHHHHHHHHHHcC-CCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHh---------cC--cHH
Confidence 3456899999999999976422 11121 25677778899999999999999987643110 00 000
Q ss_pred CChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 151 PDVSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 151 PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
....+++.+-..+...|++++|.+.+++....
T Consensus 91 ~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~ 122 (373)
T 1hz4_A 91 YALWSLIQQSEILFAQGFLQTAWETQEKAFQL 122 (373)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 12345777888899999999999999987653
No 174
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=86.74 E-value=2.8 Score=32.94 Aligned_cols=61 Identities=18% Similarity=0.133 Sum_probs=49.4
Q ss_pred hHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCCh----HhHHHHHHHHHhcCCHHHHHHHHHHHH
Q 047498 105 CCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDV----SVYTSLVQSLAASLKVSDALRLIDDIS 180 (566)
Q Consensus 105 YNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDV----VTYNTLIdGLCKsGRVdEAlkLLeEM~ 180 (566)
+..+-..+.+.|+.++|.+.|++..... |+- ..|..+-..+.+.|+.++|++.|++..
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~------------------p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~ 66 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLELY------------------PNGVYTPNALYWLGESYYATRNFQLAEAQFRDLV 66 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC------------------SSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHC------------------CCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 3445567889999999999999988753 332 367778888999999999999999998
Q ss_pred hCC
Q 047498 181 RVG 183 (566)
Q Consensus 181 ~rG 183 (566)
+..
T Consensus 67 ~~~ 69 (129)
T 2xev_A 67 SRY 69 (129)
T ss_dssp HHC
T ss_pred HHC
Confidence 864
No 175
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=84.92 E-value=2.5 Score=42.13 Aligned_cols=97 Identities=6% Similarity=-0.041 Sum_probs=72.6
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWS 149 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~ 149 (566)
=.+...|...|++++|.++|+.+.. +. |+-+..-.+=.-+.+.|+.++|+..|++... |.
T Consensus 106 LayA~~L~~~g~y~eA~~~l~~~~~--~~-p~~~~~~~~a~l~~~~~r~~dA~~~l~~a~~-----------------~~ 165 (282)
T 4f3v_A 106 MGFAACEAAQGNYADAMEALEAAPV--AG-SEHLVAWMKAVVYGAAERWTDVIDQVKSAGK-----------------WP 165 (282)
T ss_dssp HHHHHHHHHHTCHHHHHHHHTSSCC--TT-CHHHHHHHHHHHHHHTTCHHHHHHHHTTGGG-----------------CS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHh--cC-CchHHHHHHHHHHHHcCCHHHHHHHHHHhhc-----------------cC
Confidence 3566778899999999999999973 22 5544566666689999999999999974322 11
Q ss_pred CCC--hHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCC
Q 047498 150 RPD--VSVYTSLVQSLAASLKVSDALRLIDDISRVGVSP 186 (566)
Q Consensus 150 ~PD--VVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsP 186 (566)
.|. ...|..|=..|.+.|+.++|++.|++.......|
T Consensus 166 d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P 204 (282)
T 4f3v_A 166 DKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGE 204 (282)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTT
T ss_pred CcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCc
Confidence 121 2356677778999999999999999998544336
No 176
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=84.62 E-value=2.6 Score=33.24 Aligned_cols=60 Identities=7% Similarity=-0.106 Sum_probs=48.7
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhc
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSS 131 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~sr 131 (566)
..+-..+.+.|++++|.+.|++..+.. .-+...|..+-..+.+.|+.++|...|++....
T Consensus 23 ~~lg~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 82 (115)
T 2kat_A 23 FTLGKTYAEHEQFDAALPHLRAALDFD--PTYSVAWKWLGKTLQGQGDRAGARQAWESGLAA 82 (115)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHC--CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 345556788999999999999987522 234667889999999999999999999987654
No 177
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=83.42 E-value=3 Score=32.90 Aligned_cols=58 Identities=16% Similarity=0.020 Sum_probs=47.2
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHh
Q 047498 71 ELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRS 130 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~s 130 (566)
.+=..+.+.|++++|++.|++..+.. .-+...|..+=..|.+.|+.++|++.|++-..
T Consensus 12 ~lg~~~~~~g~~~~A~~~~~~al~~~--p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~ 69 (100)
T 3ma5_A 12 ALAQEHLKHDNASRALALFEELVETD--PDYVGTYYHLGKLYERLDRTDDAIDTYAQGIE 69 (100)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHS--TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC--CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 44456778999999999999997532 12456789999999999999999999998764
No 178
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=83.16 E-value=2.3 Score=45.72 Aligned_cols=115 Identities=14% Similarity=0.051 Sum_probs=82.5
Q ss_pred HHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCc-c-cc--------
Q 047498 73 LSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSEN-G-TL-------- 142 (566)
Q Consensus 73 IrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvT-Y-aL-------- 142 (566)
-..+.+.|++++|++.|++..+.. .-|...|+.+=..+.+.|+.++|++.|++..+.. |+... | .+
T Consensus 440 a~~~~~~g~~~~A~~~~~~al~~~--p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~--P~~~~~~~~lg~~~~~~g 515 (681)
T 2pzi_A 440 VRALLDLGDVAKATRKLDDLAERV--GWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTF--PGELAPKLALAATAELAG 515 (681)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS--TTCSHHHHHHHHHHHHHT
T ss_pred HHHHHhcCCHHHHHHHHHHHhccC--cchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCChHHHHHHHHHHHHcC
Confidence 356778999999999999997521 1256678888889999999999999999987543 32211 1 00
Q ss_pred ----cccc----ccCCC-ChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccc
Q 047498 143 ----VDRW----KWSRP-DVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGK 194 (566)
Q Consensus 143 ----i~~~----rw~~P-DVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYnt 194 (566)
+..+ +. .| |...|.-|=..|.+.|+.++|++.|++..+ ..|++.-.|..
T Consensus 516 ~~~~~~~~~~al~~-~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~--l~P~~~~a~~~ 573 (681)
T 2pzi_A 516 NTDEHKFYQTVWST-NDGVISAAFGLARARSAEGDRVGAVRTLDEVPP--TSRHFTTARLT 573 (681)
T ss_dssp CCCTTCHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCT--TSTTHHHHHHH
T ss_pred ChHHHHHHHHHHHh-CCchHHHHHHHHHHHHHcCCHHHHHHHHHhhcc--cCcccHHHHHH
Confidence 0011 11 34 677899999999999999999999998765 45754444433
No 179
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=82.66 E-value=3.8 Score=38.51 Aligned_cols=78 Identities=12% Similarity=-0.055 Sum_probs=63.5
Q ss_pred ChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCC-ChHhHHHHHHHHHhcCCHHHHHHHHHHH
Q 047498 101 TVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRP-DVSVYTSLVQSLAASLKVSDALRLIDDI 179 (566)
Q Consensus 101 DvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~P-DVVTYNTLIdGLCKsGRVdEAlkLLeEM 179 (566)
+...+..+-..+.+.|+.++|+..|++..... | |...|+.+-..+-+.|++++|++.+++.
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~------------------p~~~~~~~~la~~~~~~~~~~~A~~~~~~a 64 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRN------------------PLVAVYYTNRALCYLKMQQPEQALADCRRA 64 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------------------SCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------------------CccHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 45567888889999999999999999987652 4 7788999999999999999999999998
Q ss_pred HhCCCCCCCcccccceecc
Q 047498 180 SRVGVSPGEEVPFGKVVRC 198 (566)
Q Consensus 180 ~~rGcsPdDvVTYntLI~C 198 (566)
.+. .|++...|..+-.+
T Consensus 65 l~~--~p~~~~~~~~lg~~ 81 (281)
T 2c2l_A 65 LEL--DGQSVKAHFFLGQC 81 (281)
T ss_dssp TTS--CTTCHHHHHHHHHH
T ss_pred HHh--CCCCHHHHHHHHHH
Confidence 874 67665555544433
No 180
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=81.89 E-value=2.8 Score=42.64 Aligned_cols=65 Identities=11% Similarity=-0.056 Sum_probs=53.8
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhc-----CCCCCC
Q 047498 71 ELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSS-----FDQGLS 137 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~sr-----G~~Pdv 137 (566)
.+++.+-+.|+.++|+..+...... ...++..|-.||.+|.+.|+..+|++.|++.++. |+.|+.
T Consensus 176 ~~~~~~l~~g~~~~a~~~l~~~~~~--~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~~ 245 (388)
T 2ff4_A 176 AKAEAEIACGRASAVIAELEALTFE--HPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGP 245 (388)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH--STTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCCH
Confidence 4556677899999999999988742 3468889999999999999999999999998764 886444
No 181
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=80.76 E-value=4.3 Score=41.32 Aligned_cols=93 Identities=6% Similarity=-0.047 Sum_probs=69.2
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCC
Q 047498 71 ELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSR 150 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~ 150 (566)
.+=..+.+.|++++|++.+++..+.. .-+...|.-+=.+|.+.|+.++|+..|++......
T Consensus 322 nla~~~~~~g~~~~A~~~~~~al~~~--p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P----------------- 382 (457)
T 1kt0_A 322 NLAMCYLKLREYTKAVECCDKALGLD--SANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNP----------------- 382 (457)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC------------------
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcC--CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-----------------
Confidence 33455668999999999999987532 23677889999999999999999999999885421
Q ss_pred CChHhHHHHHHHHHhcCCHHHHHH-HHHHHHhC
Q 047498 151 PDVSVYTSLVQSLAASLKVSDALR-LIDDISRV 182 (566)
Q Consensus 151 PDVVTYNTLIdGLCKsGRVdEAlk-LLeEM~~r 182 (566)
-|...|+.|-..+-+.|+.++|.+ ++..|..+
T Consensus 383 ~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~f~k 415 (457)
T 1kt0_A 383 QNKAARLQISMCQKKAKEHNERDRRIYANMFKK 415 (457)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 255678888888999999988764 55666544
No 182
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=80.01 E-value=8.1 Score=31.64 Aligned_cols=77 Identities=13% Similarity=-0.016 Sum_probs=59.4
Q ss_pred hhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCC
Q 047498 104 ECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRVG 183 (566)
Q Consensus 104 TYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rG 183 (566)
.+-.+-..+.+.|+.++|+..|++.....- -|...|..|=..+.+.|+.++|++.|++..+.
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P-----------------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l- 80 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEP-----------------EREEAWRSLGLTQAENEKDGLAIIALNHARML- 80 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHST-----------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCC-----------------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-
Confidence 345566788999999999999999886532 36777888888999999999999999998874
Q ss_pred CCCCCcccccceeccc
Q 047498 184 VSPGEEVPFGKVVRCP 199 (566)
Q Consensus 184 csPdDvVTYntLI~C~ 199 (566)
.|++...|..+-.++
T Consensus 81 -~P~~~~~~~~la~~~ 95 (121)
T 1hxi_A 81 -DPKDIAVHAALAVSH 95 (121)
T ss_dssp -CTTCHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHH
Confidence 575555554444443
No 183
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=79.27 E-value=9.2 Score=30.90 Aligned_cols=78 Identities=18% Similarity=0.180 Sum_probs=60.0
Q ss_pred cChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHH
Q 047498 100 LTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDI 179 (566)
Q Consensus 100 PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM 179 (566)
.+...|..|=.-+.+.|+.+.|..-|++-...--..+ ....+....|.-|-..+.+.|++++|+.++++.
T Consensus 3 Lsa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~----------~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~a 72 (104)
T 2v5f_A 3 LTAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGE----------ISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKL 72 (104)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTC----------CCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccC----------CCcccHHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 4567889999999999999999999988654310000 001256778999999999999999999999999
Q ss_pred HhCCCCCCCc
Q 047498 180 SRVGVSPGEE 189 (566)
Q Consensus 180 ~~rGcsPdDv 189 (566)
.+ +.|++.
T Consensus 73 l~--l~P~~~ 80 (104)
T 2v5f_A 73 LE--LDPEHQ 80 (104)
T ss_dssp HH--HCTTCH
T ss_pred Hh--cCCCCH
Confidence 87 578553
No 184
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=77.62 E-value=9.6 Score=36.88 Aligned_cols=105 Identities=10% Similarity=-0.008 Sum_probs=71.5
Q ss_pred cCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCC-cc-cccc-----------
Q 047498 78 GAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSE-NG-TLVD----------- 144 (566)
Q Consensus 78 KAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~Pdvv-TY-aLi~----------- 144 (566)
..|+.++|.+.+.+.... ..-+...++.+-..|.+.|+.++|++.|++..... |+.. .+ .+-.
T Consensus 225 ~~~~~~~a~~~~~~al~~--~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~lg~~y~~~~~~~~~ 300 (472)
T 4g1t_A 225 EGEEEGEGEKLVEEALEK--APGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYI--PNNAYLHCQIGCCYRAKVFQVMN 300 (472)
T ss_dssp -----CHHHHHHHHHHHH--CSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHh--CccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhC--CChHHHHHHHHHHHHHHHHHhhh
Confidence 457888999999887642 22355678889999999999999999999877543 3321 11 0000
Q ss_pred ------------------c---c----ccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCC
Q 047498 145 ------------------R---W----KWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSP 186 (566)
Q Consensus 145 ------------------~---~----rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsP 186 (566)
. + ..-..+..+|+.+-..+.+.|+.++|++.|++..+....|
T Consensus 301 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~ 367 (472)
T 4g1t_A 301 LRENGMYGKRKLLELIGHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTP 367 (472)
T ss_dssp C------CHHHHHHHHHHHHHHHHHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCC
Confidence 0 0 0113467788999999999999999999999998876554
No 185
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=77.01 E-value=3 Score=40.66 Aligned_cols=91 Identities=12% Similarity=-0.001 Sum_probs=47.0
Q ss_pred HHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCC
Q 047498 72 LLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRP 151 (566)
Q Consensus 72 LIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~P 151 (566)
+-..+.+.|++++|++.+.+..+.. .-+...|.-+=.+|.+.|+.++|+..|++..... |
T Consensus 236 la~~~~~~g~~~~A~~~~~~al~~~--p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~------------------p 295 (338)
T 2if4_A 236 IAACLIKLKRYDEAIGHCNIVLTEE--EKNPKALFRRGKAKAELGQMDSARDDFRKAQKYA------------------P 295 (338)
T ss_dssp HHHHHHTTTCCHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC---------------------
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC------------------C
Confidence 3446678999999999999987522 2367789999999999999999999999876432 3
Q ss_pred -ChHhHHHHHHH-HHhcCCHHHHHHHHHHHHhC
Q 047498 152 -DVSVYTSLVQS-LAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 152 -DVVTYNTLIdG-LCKsGRVdEAlkLLeEM~~r 182 (566)
|...++.|-.- ....+..++|.++|..|...
T Consensus 296 ~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~ 328 (338)
T 2if4_A 296 DDKAIRRELRALAEQEKALYQKQKEMYKGIFKG 328 (338)
T ss_dssp ---------------------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 22333333332 34557778888999888754
No 186
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=76.59 E-value=6 Score=37.84 Aligned_cols=57 Identities=9% Similarity=0.030 Sum_probs=43.7
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcCCCCcCh---------------hhhHHHHHHHHhcCChhHHHHHHHHHHh
Q 047498 74 SRVSGAKDASEVLEIVAESSKRSGGVLTV---------------DECCLIINAAIDRGNTDLALSIFYAMRS 130 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~Gg~PDv---------------vTYNsLI~GlCKaGrVDeAlsLF~EM~s 130 (566)
+.+.+.|++++|.+.|.+..+......|. ..++.|...|.+.|+.++|.++|.....
T Consensus 12 ~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~ 83 (434)
T 4b4t_Q 12 RRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTE 83 (434)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHH
T ss_pred HHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 45778999999999999987421111121 1367899999999999999999998764
No 187
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=76.39 E-value=11 Score=33.63 Aligned_cols=87 Identities=17% Similarity=0.113 Sum_probs=57.4
Q ss_pred HHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcC----ChhHHHHHHHHHHhcCCCCCCCccccccccccCC
Q 047498 75 RVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRG----NTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSR 150 (566)
Q Consensus 75 GLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaG----rVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~ 150 (566)
-+...++.++|++.|++..+ .| +...++.|=..|.+ | +.++|++.|++-...|.
T Consensus 27 ~~~~~~~~~~A~~~~~~a~~-~g---~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~g~----------------- 84 (212)
T 3rjv_A 27 TWVSSGDYQKAEYWAQKAAA-QG---DGDALALLAQLKIR-NPQQADYPQARQLAEKAVEAGS----------------- 84 (212)
T ss_dssp HHHHHTCHHHHHHHHHHHHH-TT---CHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHTTC-----------------
T ss_pred HHhcCCCHHHHHHHHHHHHH-cC---CHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHCCC-----------------
Confidence 34457899999999998875 22 44566666555666 6 88999999988876654
Q ss_pred CChHhHHHHHHHHHh----cCCHHHHHHHHHHHHhCCCC
Q 047498 151 PDVSVYTSLVQSLAA----SLKVSDALRLIDDISRVGVS 185 (566)
Q Consensus 151 PDVVTYNTLIdGLCK----sGRVdEAlkLLeEM~~rGcs 185 (566)
...++.|=.-|.. .++.++|++.|++-.+.|..
T Consensus 85 --~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~ 121 (212)
T 3rjv_A 85 --KSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSES 121 (212)
T ss_dssp --HHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTS
T ss_pred --HHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCC
Confidence 2334444444443 56677777777777666653
No 188
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=75.66 E-value=15 Score=36.57 Aligned_cols=81 Identities=11% Similarity=-0.008 Sum_probs=63.9
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCC-C
Q 047498 74 SRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRP-D 152 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~P-D 152 (566)
..+.+.|++++|++.+++..+. ..-+...|..+=.+|.+.|+.++|++.|++..+.. | |
T Consensus 281 ~~~~~~g~~~~A~~~~~~al~~--~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~------------------P~~ 340 (370)
T 1ihg_A 281 ACKLKMSDWQGAVDSCLEALEI--DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIA------------------PED 340 (370)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTT--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------------------TTC
T ss_pred HHHHhccCHHHHHHHHHHHHHh--CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC------------------CCC
Confidence 4566799999999999999842 22356788889999999999999999999987652 4 5
Q ss_pred hHhHHHHHHHHHhcCCHHHHHH
Q 047498 153 VSVYTSLVQSLAASLKVSDALR 174 (566)
Q Consensus 153 VVTYNTLIdGLCKsGRVdEAlk 174 (566)
...+..|-..+.+.++.++|.+
T Consensus 341 ~~~~~~l~~~~~~~~~~~~a~k 362 (370)
T 1ihg_A 341 KAIQAELLKVKQKIKAQKDKEK 362 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 6667777777777777777754
No 189
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=74.06 E-value=20 Score=34.62 Aligned_cols=73 Identities=12% Similarity=0.148 Sum_probs=52.9
Q ss_pred cChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCC-ChHhHHHHHHHHHhcCCHHHHHHHHHH
Q 047498 100 LTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRP-DVSVYTSLVQSLAASLKVSDALRLIDD 178 (566)
Q Consensus 100 PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~P-DVVTYNTLIdGLCKsGRVdEAlkLLeE 178 (566)
.-+..||.|=..+.+.|+.++|++.|++-.+---. ..... ..| ..+||+-|=..+.+.|+.++|...+++
T Consensus 49 ~~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~--------~~~~~-~~~~~~~~~~nla~~y~~~g~~~~A~~~~~k 119 (472)
T 4g1t_A 49 FKATMCNLLAYLKHLKGQNEAALECLRKAEELIQQ--------EHADQ-AEIRSLVTWGNYAWVYYHMGRLSDVQIYVDK 119 (472)
T ss_dssp -CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--------HSGGG-CTTTTHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh--------cCccc-cchHHHHHHHHHHHHHHHcCChHHHHHHHHH
Confidence 34567999988999999999999999875421000 00000 123 467899999999999999999999987
Q ss_pred HHh
Q 047498 179 ISR 181 (566)
Q Consensus 179 M~~ 181 (566)
...
T Consensus 120 a~~ 122 (472)
T 4g1t_A 120 VKH 122 (472)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 190
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=72.49 E-value=8.7 Score=31.04 Aligned_cols=59 Identities=12% Similarity=-0.002 Sum_probs=47.7
Q ss_pred HHHHHcCCCHHHHHHHHHHHhhcC-----CCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhc
Q 047498 73 LSRVSGAKDASEVLEIVAESSKRS-----GGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSS 131 (566)
Q Consensus 73 IrGLCKAGrlDEAleLL~EM~er~-----Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~sr 131 (566)
=+-+.+.|++++|...|++..+.. .+......|+.|-.++.+.|+.++|+.++++....
T Consensus 12 G~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l 75 (104)
T 2v5f_A 12 GKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL 75 (104)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 345678999999999998875321 23456778899999999999999999999998764
No 191
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=71.31 E-value=33 Score=34.21 Aligned_cols=83 Identities=7% Similarity=0.043 Sum_probs=54.9
Q ss_pred cCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHh----cCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCCh
Q 047498 78 GAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAID----RGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDV 153 (566)
Q Consensus 78 KAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCK----aGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDV 153 (566)
..++.++|++.|++-.+ .| +...+..|=..|.. .++.++|++.|++-...|. .
T Consensus 55 ~~~~~~~A~~~~~~a~~-~~---~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~-------------------~ 111 (490)
T 2xm6_A 55 TTKDLTQAMDWFRRAAE-QG---YTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKGL-------------------P 111 (490)
T ss_dssp SCCCHHHHHHHHHHHHH-TT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC-------------------H
T ss_pred CCcCHHHHHHHHHHHHH-CC---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC-------------------H
Confidence 37888888888888875 22 45567777677777 8888888888888776553 2
Q ss_pred HhHHHHHHHHHh----cCCHHHHHHHHHHHHhCC
Q 047498 154 SVYTSLVQSLAA----SLKVSDALRLIDDISRVG 183 (566)
Q Consensus 154 VTYNTLIdGLCK----sGRVdEAlkLLeEM~~rG 183 (566)
..+..|=..|.. .++.++|++.|++-...|
T Consensus 112 ~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~ 145 (490)
T 2xm6_A 112 QAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQG 145 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC
Confidence 333334444444 556666666666665554
No 192
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=69.55 E-value=11 Score=46.14 Aligned_cols=108 Identities=8% Similarity=-0.009 Sum_probs=68.8
Q ss_pred HHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCC-C------CCCCcc--cc
Q 047498 72 LLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFD-Q------GLSENG--TL 142 (566)
Q Consensus 72 LIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~-~------PdvvTY--aL 142 (566)
+=+.|...|++++|..+|.... .|..+...||+.|++++|++.+++-..... . -+...| +.
T Consensus 1201 iGd~le~eg~YeeA~~~Y~kA~----------ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef~LA~ 1270 (1630)
T 1xi4_A 1201 VGDRCYDEKMYDAAKLLYNNVS----------NFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQ 1270 (1630)
T ss_pred HHHHHHhcCCHHHHHHHHHhhh----------HHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHHHHH
Confidence 3355667788888888777753 599999999999999999999976532110 0 000011 11
Q ss_pred ccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccc
Q 047498 143 VDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPF 192 (566)
Q Consensus 143 i~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTY 192 (566)
..+.. ..-+.--|.-+++-|-+.|++++|+.+++.=. |..|..+..|
T Consensus 1271 ~cgl~-Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL--~LeraH~gmf 1317 (1630)
T 1xi4_A 1271 MCGLH-IVVHADELEELINYYQDRGYFEELITMLEAAL--GLERAHMGMF 1317 (1630)
T ss_pred HHHHh-hhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHh--ccChhHhHHH
Confidence 11111 12344467799999999999999999995544 4555333333
No 193
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=69.36 E-value=50 Score=27.71 Aligned_cols=87 Identities=9% Similarity=0.102 Sum_probs=62.4
Q ss_pred HcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHh----cCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCC
Q 047498 77 SGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAID----RGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPD 152 (566)
Q Consensus 77 CKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCK----aGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PD 152 (566)
-..+.+++|++.|++-.+ .| +...++.|=..|.+ .++.++|++.|++-.+.|.
T Consensus 36 ~~g~~~~~A~~~~~~Aa~-~g---~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~------------------- 92 (138)
T 1klx_A 36 NSQINKQKLFQYLSKACE-LN---SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGLND------------------- 92 (138)
T ss_dssp CTTSCHHHHHHHHHHHHH-TT---CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTC-------------------
T ss_pred HcCCCHHHHHHHHHHHHc-CC---CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcCCC-------------------
Confidence 345667778888888875 22 55567777666766 7888888888888877654
Q ss_pred hHhHHHHHHHHHh----cCCHHHHHHHHHHHHhCCCCC
Q 047498 153 VSVYTSLVQSLAA----SLKVSDALRLIDDISRVGVSP 186 (566)
Q Consensus 153 VVTYNTLIdGLCK----sGRVdEAlkLLeEM~~rGcsP 186 (566)
...+..|=.-|.+ .++.++|++.|+.-.+.|...
T Consensus 93 ~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~~~ 130 (138)
T 1klx_A 93 QDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLGSED 130 (138)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCCCHH
Confidence 3445556556666 788999999999888877543
No 194
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=68.94 E-value=38 Score=33.79 Aligned_cols=91 Identities=9% Similarity=-0.041 Sum_probs=62.7
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHh----cCChhHHHHHHHHHHhcCCCCCCCccccccc
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAID----RGNTDLALSIFYAMRSSFDQGLSENGTLVDR 145 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCK----aGrVDeAlsLF~EM~srG~~PdvvTYaLi~~ 145 (566)
....+|..-.++.++|++.|++..+ .| +...+..|=..|.. .++.++|++.|++....|.
T Consensus 119 ~~y~~g~g~~~~~~~A~~~~~~a~~-~~---~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~~------------ 182 (490)
T 2xm6_A 119 VMYHEGNGVKVDKAESVKWFRLAAE-QG---RDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQGN------------ 182 (490)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHHHHH-TT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC------------
T ss_pred HHHHcCCCCCCCHHHHHHHHHHHHH-CC---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC------------
Confidence 3333443338899999999999875 33 45567777777777 8899999999998876542
Q ss_pred cccCCCChHhHHHHHHHHHh----cCCHHHHHHHHHHHHhCC
Q 047498 146 WKWSRPDVSVYTSLVQSLAA----SLKVSDALRLIDDISRVG 183 (566)
Q Consensus 146 ~rw~~PDVVTYNTLIdGLCK----sGRVdEAlkLLeEM~~rG 183 (566)
...+..|-..|.+ .++.++|++.|++-.+.|
T Consensus 183 -------~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~ 217 (490)
T 2xm6_A 183 -------VWSCNQLGYMYSRGLGVERNDAISAQWYRKSATSG 217 (490)
T ss_dssp -------HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred -------HHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHCC
Confidence 3445555555555 667777777776666665
No 195
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=67.43 E-value=31 Score=35.99 Aligned_cols=94 Identities=10% Similarity=0.007 Sum_probs=58.5
Q ss_pred HHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcC-CCCCCCcccccc---cc-ccC-
Q 047498 76 VSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSF-DQGLSENGTLVD---RW-KWS- 149 (566)
Q Consensus 76 LCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG-~~PdvvTYaLi~---~~-rw~- 149 (566)
.-..|++++|+++.+++. +...|..|=..+.+.|+++.|.+.|..+.... +. .-|.... .+ +..
T Consensus 662 ~l~~~~~~~A~~~~~~~~-------~~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~---~l~~~~~~~~~~~~~~~ 731 (814)
T 3mkq_A 662 ALKVGQLTLARDLLTDES-------AEMKWRALGDASLQRFNFKLAIEAFTNAHDLESLF---LLHSSFNNKEGLVTLAK 731 (814)
T ss_dssp HHHHTCHHHHHHHHTTCC-------CHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHH---HHHHHTTCHHHHHHHHH
T ss_pred hhhcCCHHHHHHHHHhhC-------cHhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhH---HHHHHcCCHHHHHHHHH
Confidence 345799999999877664 44578888888889999999998888874321 00 0000000 00 000
Q ss_pred -CCChHhHHHHHHHHHhcCCHHHHHHHHHHH
Q 047498 150 -RPDVSVYTSLVQSLAASLKVSDALRLIDDI 179 (566)
Q Consensus 150 -~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM 179 (566)
.-..--|+.-.+.+.+.|++++|++++.++
T Consensus 732 ~a~~~~~~~~A~~~~~~~g~~~~a~~~~~~~ 762 (814)
T 3mkq_A 732 DAETTGKFNLAFNAYWIAGDIQGAKDLLIKS 762 (814)
T ss_dssp HHHHTTCHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHcCchHHHHHHHHHcCCHHHHHHHHHHc
Confidence 000011566666788889999999888776
No 196
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=65.36 E-value=15 Score=30.67 Aligned_cols=85 Identities=11% Similarity=0.137 Sum_probs=57.4
Q ss_pred hhhHHHHHHHHhcCChhHHHHHHHHHHhcCC------CCCCCccccccccc-cCCCChHhHHHHHHHHHhcCCHHHHHHH
Q 047498 103 DECCLIINAAIDRGNTDLALSIFYAMRSSFD------QGLSENGTLVDRWK-WSRPDVSVYTSLVQSLAASLKVSDALRL 175 (566)
Q Consensus 103 vTYNsLI~GlCKaGrVDeAlsLF~EM~srG~------~PdvvTYaLi~~~r-w~~PDVVTYNTLIdGLCKsGRVdEAlkL 175 (566)
..|...=+.+.+.|+.++|++.|.+-...-- .|+.- .+. ...-+...|+-+-..+-+.|++++|+..
T Consensus 12 ~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~ 85 (162)
T 3rkv_A 12 EALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEP------EWVELDRKNIPLYANMSQCYLNIGDLHEAEET 85 (162)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSH------HHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHH------HHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 3466667789999999999999998765300 00000 000 0012346788899999999999999999
Q ss_pred HHHHHhCCCCCCCcccccce
Q 047498 176 IDDISRVGVSPGEEVPFGKV 195 (566)
Q Consensus 176 LeEM~~rGcsPdDvVTYntL 195 (566)
+++..+. .|++.-.|..+
T Consensus 86 ~~~al~~--~p~~~~a~~~~ 103 (162)
T 3rkv_A 86 SSEVLKR--EETNEKALFRR 103 (162)
T ss_dssp HHHHHHH--STTCHHHHHHH
T ss_pred HHHHHhc--CCcchHHHHHH
Confidence 9999885 57554444433
No 197
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=64.42 E-value=12 Score=39.06 Aligned_cols=60 Identities=10% Similarity=-0.080 Sum_probs=48.1
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhh----cCCC-CcCh-hhhHHHHHHHHhcCChhHHHHHHHHHHh
Q 047498 71 ELLSRVSGAKDASEVLEIVAESSK----RSGG-VLTV-DECCLIINAAIDRGNTDLALSIFYAMRS 130 (566)
Q Consensus 71 aLIrGLCKAGrlDEAleLL~EM~e----r~Gg-~PDv-vTYNsLI~GlCKaGrVDeAlsLF~EM~s 130 (566)
.|-..|...|++++|..++.+..+ ..|. .||+ .+||-|=..|...|+.++|.++|++-..
T Consensus 345 nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~ 410 (433)
T 3qww_A 345 QAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIA 410 (433)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 566778889999999999888741 1333 6666 5689999999999999999999988653
No 198
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=63.42 E-value=57 Score=28.93 Aligned_cols=83 Identities=10% Similarity=0.111 Sum_probs=62.0
Q ss_pred CHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHh----cCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhH
Q 047498 81 DASEVLEIVAESSKRSGGVLTVDECCLIINAAID----RGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVY 156 (566)
Q Consensus 81 rlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCK----aGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTY 156 (566)
+.++|++.|++..+ .| +..+++.|=..|.+ .++.++|++.|++-...|.. .-+...+
T Consensus 68 ~~~~A~~~~~~A~~-~g---~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~---------------~~~~~a~ 128 (212)
T 3rjv_A 68 DYPQARQLAEKAVE-AG---SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSES---------------DAAVDAQ 128 (212)
T ss_dssp CHHHHHHHHHHHHH-TT---CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTS---------------HHHHHHH
T ss_pred CHHHHHHHHHHHHH-CC---CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCC---------------cchHHHH
Confidence 89999999999875 33 45567777666766 88999999999988776530 0025667
Q ss_pred HHHHHHHHh----cCCHHHHHHHHHHHHhC
Q 047498 157 TSLVQSLAA----SLKVSDALRLIDDISRV 182 (566)
Q Consensus 157 NTLIdGLCK----sGRVdEAlkLLeEM~~r 182 (566)
+.|=.-|.+ .++.++|++.|++-.+.
T Consensus 129 ~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 129 MLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp HHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 777666666 77888888888888776
No 199
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=62.73 E-value=20 Score=44.03 Aligned_cols=109 Identities=13% Similarity=0.115 Sum_probs=70.1
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCcc-----cccccc--
Q 047498 74 SRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENG-----TLVDRW-- 146 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTY-----aLi~~~-- 146 (566)
+.+-+.|++++|.+-|.+-. |...|.-++..|.+.|+.++|++.|..-++..-.|.+.|+ .-...+
T Consensus 1113 KAql~~G~~kEAIdsYiKAd-------D~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rlee 1185 (1630)
T 1xi4_A 1113 KAQLQKGMVKEAIDSYIKAD-------DPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAE 1185 (1630)
T ss_pred HHHHhCCCHHHHHHHHHhcC-------ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHH
Confidence 45556777888877774431 5567888999999999999999998754433211111111 000000
Q ss_pred ---ccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCCcccccceeccc
Q 047498 147 ---KWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSPGEEVPFGKVVRCP 199 (566)
Q Consensus 147 ---rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsPdDvVTYntLI~C~ 199 (566)
-+-.||...|.-+=+-|...|+.++|..+|.... .|..+..|+
T Consensus 1186 le~fI~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA~----------ny~rLA~tL 1231 (1630)
T 1xi4_A 1186 LEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNVS----------NFGRLASTL 1231 (1630)
T ss_pred HHHHHhCCCHHHHHHHHHHHHhcCCHHHHHHHHHhhh----------HHHHHHHHH
Confidence 0125777777777788888888888888888741 566666655
No 200
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=62.04 E-value=13 Score=34.13 Aligned_cols=90 Identities=9% Similarity=0.014 Sum_probs=68.8
Q ss_pred HHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCCh----------hHHHHHHHHHHhcCCCCCCCccccccc
Q 047498 76 VSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNT----------DLALSIFYAMRSSFDQGLSENGTLVDR 145 (566)
Q Consensus 76 LCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrV----------DeAlsLF~EM~srG~~PdvvTYaLi~~ 145 (566)
+.+.+++++|++.+++-.+.. .-|...|+-+=.++.+.|+. ++|++.|++-.+-
T Consensus 12 ~~r~~~feeA~~~~~~Ai~l~--P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l-------------- 75 (158)
T 1zu2_A 12 FDRILLFEQIRQDAENTYKSN--PLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLI-------------- 75 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH--------------
T ss_pred HHHHhHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh--------------
Confidence 566788999999999987532 23667777777788887764 5999999988755
Q ss_pred cccCCC-ChHhHHHHHHHHHhcC-----------CHHHHHHHHHHHHhCCCCCC
Q 047498 146 WKWSRP-DVSVYTSLVQSLAASL-----------KVSDALRLIDDISRVGVSPG 187 (566)
Q Consensus 146 ~rw~~P-DVVTYNTLIdGLCKsG-----------RVdEAlkLLeEM~~rGcsPd 187 (566)
.| +...|+.|=..|-+.| ++++|++.|++-.+ +.|+
T Consensus 76 ----dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~--l~P~ 123 (158)
T 1zu2_A 76 ----DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVD--EQPD 123 (158)
T ss_dssp ----CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH--HCTT
T ss_pred ----CcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHH--hCCC
Confidence 24 4567888888887764 89999999999887 4774
No 201
>2avr_X Adhesion A; antiparallel helix-loop-helix, leucine chain; HET: FLC; 1.90A {Fusobacterium nucleatum} PDB: 3etw_A 2gkq_A 2bc6_A 3etx_A 3ety_A 2gld_A 3etz_A 2gl2_A
Probab=60.86 E-value=69 Score=28.90 Aligned_cols=78 Identities=19% Similarity=0.306 Sum_probs=61.0
Q ss_pred HHHHhhhhHHHH----HHHHHHHHHHHHHHHHHHHHHhh-------hhhhhhhcc-----chhHhHHHHHHHHHHhhhhh
Q 047498 422 RQQLLSQYDLLQ----SRIKDLKEAAEKEVWMLARMCQL-------ENKIYAVGE-----PSYRARKSRVKRVREGLQNS 485 (566)
Q Consensus 422 ~qqll~qy~~l~----~r~~~l~~~~~~~v~~lar~~ql-------~nk~~avg~-----~~y~ar~~rv~~~r~~l~~~ 485 (566)
=.+|=.+|++|. .|-++.++.|+..+.-|+---.+ .+||.++.. ..|.-=..+-+.++..||..
T Consensus 11 l~~LEaeyq~L~~kE~qrynqeka~AE~A~~~L~~~~~m~~~i~ek~~~i~~~~~~~~yK~eY~~L~KkYk~~~~~Ld~e 90 (119)
T 2avr_X 11 LQALDAEYQNLANQEEARFNEERAQADAARQALAQNEQVYNELSQRAQRLQAEANTRFYKSQYQELASKYEDALKKLEAE 90 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345667787775 46778888888888888776544 455666666 56777788889999999999
Q ss_pred hhhchhhhhhHHHh
Q 047498 486 LRGRIELIDSYARI 499 (566)
Q Consensus 486 l~~~iel~~~ya~~ 499 (566)
++..=++||.|..|
T Consensus 91 I~~qe~iI~nFe~I 104 (119)
T 2avr_X 91 MEQQKAVISDFEKI 104 (119)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999987
No 202
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=58.38 E-value=16 Score=30.74 Aligned_cols=85 Identities=7% Similarity=-0.001 Sum_probs=62.0
Q ss_pred HcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhH
Q 047498 77 SGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVY 156 (566)
Q Consensus 77 CKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTY 156 (566)
.-.++.++|++.|++-.+ .| .++ .+ |=..|.+.+.+++|++.|++-.+.|. ...+
T Consensus 6 g~~~d~~~A~~~~~~aa~-~g-~~~--a~--lg~~y~~g~~~~~A~~~~~~Aa~~g~-------------------~~a~ 60 (138)
T 1klx_A 6 TVKKDLKKAIQYYVKACE-LN-EMF--GC--LSLVSNSQINKQKLFQYLSKACELNS-------------------GNGC 60 (138)
T ss_dssp SHHHHHHHHHHHHHHHHH-TT-CTT--HH--HHHHTCTTSCHHHHHHHHHHHHHTTC-------------------HHHH
T ss_pred CCccCHHHHHHHHHHHHc-CC-CHh--hh--HHHHHHcCCCHHHHHHHHHHHHcCCC-------------------HHHH
Confidence 334678999999999986 33 233 44 55555667889999999999887764 4455
Q ss_pred HHHHHHHHh----cCCHHHHHHHHHHHHhCCCCC
Q 047498 157 TSLVQSLAA----SLKVSDALRLIDDISRVGVSP 186 (566)
Q Consensus 157 NTLIdGLCK----sGRVdEAlkLLeEM~~rGcsP 186 (566)
+.|=.-|.+ .++.++|++.|++-.+.|...
T Consensus 61 ~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~~~ 94 (138)
T 1klx_A 61 RFLGDFYENGKYVKKDLRKAAQYYSKACGLNDQD 94 (138)
T ss_dssp HHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCCCCccHHHHHHHHHHHHcCCCHH
Confidence 555555555 789999999999998887543
No 203
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=57.86 E-value=38 Score=32.23 Aligned_cols=99 Identities=11% Similarity=-0.022 Sum_probs=70.1
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhc---CCC-CcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccc
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKR---SGG-VLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDR 145 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er---~Gg-~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~ 145 (566)
..|-.-+-..|++++|..++.+.... .+. .-.+..|+.++..|...|+.++|..++++-.....
T Consensus 139 ~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~------------ 206 (434)
T 4b4t_Q 139 IKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAAN------------ 206 (434)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH------------
T ss_pred HHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhh------------
Confidence 45666777789999999998877421 111 22345789999999999999999999988653210
Q ss_pred cccCCC-C--hHhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 047498 146 WKWSRP-D--VSVYTSLVQSLAASLKVSDALRLIDDISR 181 (566)
Q Consensus 146 ~rw~~P-D--VVTYNTLIdGLCKsGRVdEAlkLLeEM~~ 181 (566)
....| . ...|..+..-+...|+.++|.+.|.+..+
T Consensus 207 -~~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~ 244 (434)
T 4b4t_Q 207 -SIYCPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFE 244 (434)
T ss_dssp -HSCCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHH
T ss_pred -cCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 00012 1 35677777778889999999998877754
No 204
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=55.06 E-value=20 Score=36.91 Aligned_cols=61 Identities=8% Similarity=-0.073 Sum_probs=48.1
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhc----CCC-CcCh-hhhHHHHHHHHhcCChhHHHHHHHHHHh
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKR----SGG-VLTV-DECCLIINAAIDRGNTDLALSIFYAMRS 130 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er----~Gg-~PDv-vTYNsLI~GlCKaGrVDeAlsLF~EM~s 130 (566)
+.|..-|...|++++|..++.+..+- .|. .|++ .+||-|=.-|...|+.++|.++|++-..
T Consensus 333 ~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~ 399 (429)
T 3qwp_A 333 DCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFD 399 (429)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 35666778899999999998877411 233 5665 6689999999999999999999998653
No 205
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=51.67 E-value=32 Score=31.61 Aligned_cols=83 Identities=14% Similarity=0.038 Sum_probs=56.0
Q ss_pred hhHHHHHHHHhcCChhHHHHHHHHHHhcCCC-CCCCccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 047498 104 ECCLIINAAIDRGNTDLALSIFYAMRSSFDQ-GLSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRV 182 (566)
Q Consensus 104 TYNsLI~GlCKaGrVDeAlsLF~EM~srG~~-PdvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~r 182 (566)
.+..+=+.+.+.|+.++|++.|++-...-.. |+.. ......-|...|+-+=..|.+.||.++|+..+++-.+-
T Consensus 13 ~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~------a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l 86 (159)
T 2hr2_A 13 LALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEE------AFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHY 86 (159)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTS------CCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchh------hhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 3455566789999999999999987654211 1100 00000002348899999999999999999999988873
Q ss_pred -----CCCCCCcccc
Q 047498 183 -----GVSPGEEVPF 192 (566)
Q Consensus 183 -----GcsPdDvVTY 192 (566)
-+.|++.-.|
T Consensus 87 ~n~~~e~~pd~~~A~ 101 (159)
T 2hr2_A 87 FNRRGELNQDEGKLW 101 (159)
T ss_dssp HHHHCCTTSTHHHHH
T ss_pred hhccccCCCchHHHH
Confidence 2388655555
No 206
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=51.37 E-value=61 Score=29.73 Aligned_cols=85 Identities=8% Similarity=0.058 Sum_probs=54.4
Q ss_pred HHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcC---ChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHHHHH
Q 047498 84 EVLEIVAESSKRSGGVLTVDECCLIINAAIDRG---NTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLV 160 (566)
Q Consensus 84 EAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaG---rVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYNTLI 160 (566)
.+.+-+.+... .+.+|..+.--+=.++++.+ .+++++.+|++..+..- |+ . +.| .-|+.=|
T Consensus 16 ~~~~~y~~e~~--~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~-p~--------~----~rd-~lY~LAv 79 (152)
T 1pc2_A 16 KFEKKFQSEKA--AGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGS-KE--------E----QRD-YVFYLAV 79 (152)
T ss_dssp HHHHHHHHHHH--TTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSC-HH--------H----HHH-HHHHHHH
T ss_pred HHHHHHHHHHc--cCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCC-cc--------c----hHH-HHHHHHH
Confidence 34444554442 23367777777888888888 66689988888776531 00 0 112 2244333
Q ss_pred HHHHhcCCHHHHHHHHHHHHhCCCCCC
Q 047498 161 QSLAASLKVSDALRLIDDISRVGVSPG 187 (566)
Q Consensus 161 dGLCKsGRVdEAlkLLeEM~~rGcsPd 187 (566)
|+.|.|+.++|++.++...+ +.|+
T Consensus 80 -~~~kl~~Y~~A~~y~~~lL~--ieP~ 103 (152)
T 1pc2_A 80 -GNYRLKEYEKALKYVRGLLQ--TEPQ 103 (152)
T ss_dssp -HHHHTSCHHHHHHHHHHHHH--HCTT
T ss_pred -HHHHccCHHHHHHHHHHHHh--cCCC
Confidence 45888999999999988887 5674
No 207
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=50.51 E-value=57 Score=34.03 Aligned_cols=68 Identities=12% Similarity=-0.070 Sum_probs=56.9
Q ss_pred CcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHH
Q 047498 99 VLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDD 178 (566)
Q Consensus 99 ~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeE 178 (566)
..+...|.++-..+...|++++|+..+++.... .|+...|..+=..+.-.|+.++|.+.|++
T Consensus 274 ~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~L------------------n~s~~a~~llG~~~~~~G~~~eA~e~~~~ 335 (372)
T 3ly7_A 274 NNLSIIYQIKAVSALVKGKTDESYQAINTGIDL------------------EMSWLNYVLLGKVYEMKGMNREAADAYLT 335 (372)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------------------CCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhc------------------CCCHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 457778888877777779999999999998865 48888888888888999999999999988
Q ss_pred HHhCCCCC
Q 047498 179 ISRVGVSP 186 (566)
Q Consensus 179 M~~rGcsP 186 (566)
-.+- .|
T Consensus 336 AlrL--~P 341 (372)
T 3ly7_A 336 AFNL--RP 341 (372)
T ss_dssp HHHH--SC
T ss_pred HHhc--CC
Confidence 7774 55
No 208
>2nsz_A Programmed cell death protein 4; PDCD4, tumor suppressor, translation, antitumor protein; 1.15A {Mus musculus} SCOP: a.118.1.14 PDB: 2kzt_B 2hm8_A 2ggf_A
Probab=50.31 E-value=48 Score=29.08 Aligned_cols=62 Identities=16% Similarity=0.038 Sum_probs=48.5
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCC--hhHHHHHHHHHHhcCC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGN--TDLALSIFYAMRSSFD 133 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGr--VDeAlsLF~EM~srG~ 133 (566)
+.+|+-|...|+.+||.+.++++.. +.. -..+.+..+..++=|.+. .+...+++..+...|+
T Consensus 11 ~~ll~EY~~~~D~~Ea~~cl~eL~~-p~f-~~e~V~~~i~~alE~~~~~~~e~~~~LL~~L~~~~~ 74 (129)
T 2nsz_A 11 DMLLKEYLLSGDISEAEHCLKELEV-PHF-HHELVYEAIVMVLESTGESAFKMILDLLKSLWKSST 74 (129)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHTC-GGG-HHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHhCC-Ccc-HHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHCCC
Confidence 4678889999999999999999963 222 345667888888888753 4678889999987775
No 209
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=49.59 E-value=37 Score=37.47 Aligned_cols=89 Identities=9% Similarity=-0.107 Sum_probs=60.1
Q ss_pred HcCCCHHHHHHHHHHHhhc-CCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCC-ChH
Q 047498 77 SGAKDASEVLEIVAESSKR-SGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRP-DVS 154 (566)
Q Consensus 77 CKAGrlDEAleLL~EM~er-~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~P-DVV 154 (566)
-+.|..+.|..+|.+..+. +...+.+....+.+--. ..++.+.|.++|+...+. + | +..
T Consensus 445 rR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~-~~~d~e~Ar~ife~~Lk~-~-----------------p~~~~ 505 (679)
T 4e6h_A 445 KRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYH-ISKDTKTACKVLELGLKY-F-----------------ATDGE 505 (679)
T ss_dssp HHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHT-TTSCCHHHHHHHHHHHHH-H-----------------TTCHH
T ss_pred HHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHH-C-----------------CCchH
Confidence 3568889999999998752 11233444434443322 235589999999987765 2 3 333
Q ss_pred hHHHHHHHHHhcCCHHHHHHHHHHHHhCCC
Q 047498 155 VYTSLVQSLAASLKVSDALRLIDDISRVGV 184 (566)
Q Consensus 155 TYNTLIdGLCKsGRVdEAlkLLeEM~~rGc 184 (566)
-++..++-+.+.|+++.|+.+|++-+...-
T Consensus 506 ~w~~y~~fe~~~~~~~~AR~lferal~~~~ 535 (679)
T 4e6h_A 506 YINKYLDFLIYVNEESQVKSLFESSIDKIS 535 (679)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHTTTSS
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcC
Confidence 346778888888999999999998877644
No 210
>4dnd_A Syntaxin-10, SYN10; structural genomics, protein structure initiative, nysgrc, P biology, NEW YORK structural genomics research consortium; HET: MSE; 1.40A {Homo sapiens} PDB: 1lvf_A
Probab=49.39 E-value=49 Score=29.70 Aligned_cols=74 Identities=12% Similarity=0.143 Sum_probs=45.9
Q ss_pred hhhhhhhchhhhhhHHHhhhhheeeeehhhhHHHHHHhhhhhHHHHHHHHHHh---------------HHhHHHHHhHhh
Q 047498 482 LQNSLRGRIELIDSYARISSMIEIEIEMDSDVLAAEAVSSAESISEQIQQIME---------------LENLEEKWRLQA 546 (566)
Q Consensus 482 l~~~l~~~iel~~~ya~~~~mieievemd~dv~aae~~~~~~~i~eqi~~l~e---------------~~~l~~~wr~qa 546 (566)
++++|.+=-.|...|.++-+..------+.+-...|...+...|++|++.|-+ -++++++.+.-+
T Consensus 36 Vq~sl~~l~~l~~~w~~l~~~~~~~s~~E~~~~~~EL~~~l~sie~dLeDLe~sI~ivE~np~kF~l~~~Ei~~Rr~fV~ 115 (130)
T 4dnd_A 36 VQKAVNTARGLYQRWCELLQESAAVGREELDWTTNELRNGLRSIEWDLEDLEETIGIVEANPGKFKLPAGDLQERKVFVE 115 (130)
T ss_dssp HHHHHHHHHHHHHHHHHC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHhcCCCHHHHHHHHHHHH
Confidence 33333333345666666644321111124466788999999999999998864 345777888888
Q ss_pred hhchHHHHH
Q 047498 547 EANDEAERL 555 (566)
Q Consensus 547 ea~de~erl 555 (566)
+.++|+.++
T Consensus 116 ~~r~~I~~m 124 (130)
T 4dnd_A 116 RMREAVQEM 124 (130)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888888876
No 211
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=49.05 E-value=54 Score=33.49 Aligned_cols=86 Identities=7% Similarity=-0.002 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhc-----CChhHHHHHHHHHHhcCCCCCCCccccccccccCCC--ChH
Q 047498 82 ASEVLEIVAESSKRSGGVLTVDECCLIINAAIDR-----GNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRP--DVS 154 (566)
Q Consensus 82 lDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKa-----GrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~P--DVV 154 (566)
+.+|..++.+..+-.....+-..|.+|-.-|.+. |+.++|.++|++-..- .| |..
T Consensus 179 l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~L------------------nP~~~id 240 (301)
T 3u64_A 179 VHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRY------------------CSAHDPD 240 (301)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHH------------------CCTTCSH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHh------------------CCCCCch
Confidence 4566666666654221112355788898888884 9999999999998765 47 488
Q ss_pred hHHHHHHHHHhc-CCHHHHHHHHHHHHhCCCC
Q 047498 155 VYTSLVQSLAAS-LKVSDALRLIDDISRVGVS 185 (566)
Q Consensus 155 TYNTLIdGLCKs-GRVdEAlkLLeEM~~rGcs 185 (566)
+|...-+.||+. |+-++|.++|++-......
T Consensus 241 ~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 241 HHITYADALCIPLNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGG
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCC
Confidence 999999999995 9999999999999997766
No 212
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=46.88 E-value=71 Score=30.30 Aligned_cols=63 Identities=14% Similarity=0.057 Sum_probs=53.5
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQ 134 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~ 134 (566)
+.-++.+...|+-|+--+++.++. .+-.|+..-.-.|=++|-|-|+..+|-+|+.+-+++|++
T Consensus 95 d~ALd~lv~~~KkDqLdki~~~~l--~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG~k 157 (172)
T 1wy6_A 95 NKALDILVIQGKRDKLEEIGREIL--KNNEVSASILVAIANALRRVGDERDATTLLIEACKKGEK 157 (172)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHC----CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHhccHhHHHHHHHHHh--ccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhhhH
Confidence 456788999999999999999975 234577777788889999999999999999999999983
No 213
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=46.14 E-value=1.2e+02 Score=24.52 Aligned_cols=47 Identities=15% Similarity=0.041 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHhhcCCCCcCh-hhhHHHHHHHHhcCChhHHHHHHHHHHhc
Q 047498 82 ASEVLEIVAESSKRSGGVLTV-DECCLIINAAIDRGNTDLALSIFYAMRSS 131 (566)
Q Consensus 82 lDEAleLL~EM~er~Gg~PDv-vTYNsLI~GlCKaGrVDeAlsLF~EM~sr 131 (566)
.++|..+|++.... -|+. -+...+=..+.+.|+.++|+..|++|...
T Consensus 25 ~~~A~~~l~~AL~~---dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~ 72 (93)
T 3bee_A 25 TDEVSLLLEQALQL---EPYNEAALSLIANDHFISFRFQEAIDTWVLLLDS 72 (93)
T ss_dssp CHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHH---CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 45666666665531 1332 22233334556666666666666666543
No 214
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=45.96 E-value=43 Score=33.17 Aligned_cols=31 Identities=10% Similarity=0.104 Sum_probs=27.8
Q ss_pred CChHhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 047498 151 PDVSVYTSLVQSLAASLKVSDALRLIDDISR 181 (566)
Q Consensus 151 PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~ 181 (566)
.+......|.+.+++.|+.++|+++++.+.+
T Consensus 256 ~s~~al~~la~~~~~~~~~~~A~~~~~~l~~ 286 (306)
T 3dra_A 256 TSSFALETLAKIYTQQKKYNESRTVYDLLKS 286 (306)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHccCCHHHHHHHHHHHHh
Confidence 4677888999999999999999999999875
No 215
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=44.83 E-value=1.1e+02 Score=29.16 Aligned_cols=72 Identities=11% Similarity=0.217 Sum_probs=43.7
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcc---chhHhHHHHHHHHHHhhhhhhhhchhhh
Q 047498 417 DTIAIRQQLLSQYDLLQSRIKDLKEAAEKEVWMLARMCQLENKIYAVGE---PSYRARKSRVKRVREGLQNSLRGRIELI 493 (566)
Q Consensus 417 ~~~a~~qqll~qy~~l~~r~~~l~~~~~~~v~~lar~~ql~nk~~avg~---~~y~ar~~rv~~~r~~l~~~l~~~iel~ 493 (566)
|...++ .++.+|+.++.-++.+.+..-++| .++-+++..-|. +.+..|.+.+...-+.|.+....|-+.+
T Consensus 37 dl~~v~-~l~~~~~~f~~el~~~~~~~v~~v------~~~~~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L 109 (323)
T 3edv_A 37 DYEHVT-MLQERFREFARDTGNIGQERVDTV------NHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL 109 (323)
T ss_dssp SHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHH-HHHHHHHHHHHHHHHhhhHHHHHH------HHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444443 466677777665555433333333 333344444443 6677888888888888888887777766
Q ss_pred hh
Q 047498 494 DS 495 (566)
Q Consensus 494 ~~ 495 (566)
+.
T Consensus 110 ~~ 111 (323)
T 3edv_A 110 AA 111 (323)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 216
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=44.71 E-value=2.2e+02 Score=33.43 Aligned_cols=19 Identities=0% Similarity=0.162 Sum_probs=10.0
Q ss_pred HHHHHHHHHH-hHHhHHHHH
Q 047498 524 SISEQIQQIM-ELENLEEKW 542 (566)
Q Consensus 524 ~i~eqi~~l~-e~~~l~~~w 542 (566)
.+++|+.+|. .+...+++|
T Consensus 1034 ~L~qq~~~l~~~~~~~~~~~ 1053 (1080)
T 2dfs_A 1034 LLKTEKEELNRRIHDQAKEI 1053 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 4666666666 344444433
No 217
>2wam_A RV2714, conserved hypothetical alanine and leucine rich protein; unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=44.22 E-value=27 Score=36.20 Aligned_cols=33 Identities=21% Similarity=0.208 Sum_probs=20.0
Q ss_pred EEeCCCCcccceeccccccccCccccceeEEee
Q 047498 270 VVQTPSGMARTHRFATETVDLPAQVGERITVSS 302 (566)
Q Consensus 270 vv~~p~g~art~r~~t~t~~~paq~gervtv~~ 302 (566)
++..|---.|-.+|+.+-+++=.+-|=+-+|..
T Consensus 146 lL~G~eP~~~w~~fa~~vl~~a~~~gV~~vvtL 178 (351)
T 2wam_A 146 LLAGLEPDLKWERFITAVRLLAERLGVRQTIGL 178 (351)
T ss_dssp EEEEECCSBCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEECCCChhHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 333333334555888888888777775555533
No 218
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=43.95 E-value=1.3e+02 Score=24.31 Aligned_cols=37 Identities=8% Similarity=-0.182 Sum_probs=25.1
Q ss_pred HHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHH
Q 047498 74 SRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAI 113 (566)
Q Consensus 74 rGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlC 113 (566)
..+.+.|++++|++.+.++.+. .|+...+..|+...-
T Consensus 51 ~~~~~~g~y~~Ai~~w~~~l~~---~p~~~~~~~i~~~I~ 87 (93)
T 3bee_A 51 NDHFISFRFQEAIDTWVLLLDS---NDPNLDRVTIIESIN 87 (93)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTC---CCTTCCHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhh---CCCCccHHHHHHHHH
Confidence 4567899999999999999852 234334555555443
No 219
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A
Probab=41.89 E-value=1.7e+02 Score=27.08 Aligned_cols=98 Identities=17% Similarity=0.135 Sum_probs=60.9
Q ss_pred CHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCcc-ccccccccCCCChHhHHHH
Q 047498 81 DASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENG-TLVDRWKWSRPDVSVYTSL 159 (566)
Q Consensus 81 rlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTY-aLi~~~rw~~PDVVTYNTL 159 (566)
..++..+++.......|...+......|.. .-.|++..|..+++.....+ +.++. .+..... .+.-.....+
T Consensus 162 ~~~~~~~~l~~~~~~~~~~i~~~~l~~l~~--~~~G~~r~~~~~l~~~~~~~---~~i~~~~v~~~~~--~~~~~~~~~l 234 (319)
T 2chq_A 162 PKEAMKKRLLEICEKEGVKITEDGLEALIY--ISGGDFRKAINALQGAAAIG---EVVDADTIYQITA--TARPEEMTEL 234 (319)
T ss_dssp CHHHHHHHHHHHHHTTCCCBCHHHHHHHHH--TTTTCHHHHHHHHHHHHHSS---SCBCHHHHHHHTT--CCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCHHHHHHHHH--HcCCCHHHHHHHHHHHHHcC---CCCCHHHHHHHHC--CCCHHHHHHH
Confidence 355666677766543444445555555552 23789999999988876542 12222 1111111 2333445677
Q ss_pred HHHHHhcCCHHHHHHHHHHHHh-CCCCC
Q 047498 160 VQSLAASLKVSDALRLIDDISR-VGVSP 186 (566)
Q Consensus 160 IdGLCKsGRVdEAlkLLeEM~~-rGcsP 186 (566)
++.+.+ |++++|++++.++.. .|..|
T Consensus 235 ~~~~~~-~~~~~a~~~l~~l~~~~g~~~ 261 (319)
T 2chq_A 235 IQTALK-GNFMEARELLDRLMVEYGMSG 261 (319)
T ss_dssp HHHHHH-TCHHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHh-CCHHHHHHHHHHHHHHcCCCH
Confidence 887765 899999999999998 89887
No 220
>3etw_A Adhesin A; antiparallel helix-loop-helix, leucine chain, cell adhesin, cell adhesion; 2.00A {Fusobacterium nucleatum} PDB: 3ety_A 3etx_A 3etz_A 2gl2_A
Probab=40.47 E-value=1.9e+02 Score=26.05 Aligned_cols=83 Identities=18% Similarity=0.285 Sum_probs=58.1
Q ss_pred HHHHHHhhhhHHHH----HHHHHHHHHHHHHHHHHHHHHhhh-------hhhhhhcc-----chhHhHHHHHHHHHHhhh
Q 047498 420 AIRQQLLSQYDLLQ----SRIKDLKEAAEKEVWMLARMCQLE-------NKIYAVGE-----PSYRARKSRVKRVREGLQ 483 (566)
Q Consensus 420 a~~qqll~qy~~l~----~r~~~l~~~~~~~v~~lar~~ql~-------nk~~avg~-----~~y~ar~~rv~~~r~~l~ 483 (566)
.=-++|=.||++|. .|....++.|+.=-..||-.-++. ++|.++.. ..|..=..-.+.++..||
T Consensus 9 ~~l~~Leae~q~L~~~E~qry~~eka~AE~A~~~La~~~~l~~~i~er~~~i~~~~~~~~yk~~y~~l~k~Y~~~~keLd 88 (119)
T 3etw_A 9 GELQALDAEYQNLANQEEARFNEERAQADAARQALAQNEQVYNELSQRAQRLQAEANTRFYKSQYQELASKYEDALKKLE 88 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHH
Confidence 33456777787775 466777766666555665555544 44555554 456666777788999999
Q ss_pred hhhhhchhhhhhHHHhhhh
Q 047498 484 NSLRGRIELIDSYARISSM 502 (566)
Q Consensus 484 ~~l~~~iel~~~ya~~~~m 502 (566)
.+++..=+.||.|.+|-+.
T Consensus 89 ~~ik~qekiIdnFE~ik~l 107 (119)
T 3etw_A 89 AEMEQQKAVISDFEKIQAL 107 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988653
No 221
>2nsz_A Programmed cell death protein 4; PDCD4, tumor suppressor, translation, antitumor protein; 1.15A {Mus musculus} SCOP: a.118.1.14 PDB: 2kzt_B 2hm8_A 2ggf_A
Probab=40.12 E-value=43 Score=29.41 Aligned_cols=65 Identities=12% Similarity=0.131 Sum_probs=52.5
Q ss_pred hHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHHHHHHHHHhcC-C-HHHHHHHHHHHHhC
Q 047498 105 CCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQSLAASL-K-VSDALRLIDDISRV 182 (566)
Q Consensus 105 YNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsG-R-VdEAlkLLeEM~~r 182 (566)
.+.+|+=|...|++++|.+.++++..... -..+.+..+..+|=|.+ + .+...++|..+...
T Consensus 10 i~~ll~EY~~~~D~~Ea~~cl~eL~~p~f-----------------~~e~V~~~i~~alE~~~~~~~e~~~~LL~~L~~~ 72 (129)
T 2nsz_A 10 IDMLLKEYLLSGDISEAEHCLKELEVPHF-----------------HHELVYEAIVMVLESTGESAFKMILDLLKSLWKS 72 (129)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHTCGGG-----------------HHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHhCCCcc-----------------HHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHC
Confidence 57899999999999999999999963222 23577889999999875 2 57788999999988
Q ss_pred CCCC
Q 047498 183 GVSP 186 (566)
Q Consensus 183 GcsP 186 (566)
|+-+
T Consensus 73 ~~is 76 (129)
T 2nsz_A 73 STIT 76 (129)
T ss_dssp TCSC
T ss_pred CCcC
Confidence 8655
No 222
>2ion_A PDCD4, programmed cell death 4, PDCD4; alpha-helical, antitumor protein; 1.57A {Mus musculus} SCOP: a.118.1.14 PDB: 2ios_A 2iol_A
Probab=39.46 E-value=52 Score=29.87 Aligned_cols=62 Identities=16% Similarity=0.066 Sum_probs=48.0
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCC--hhHHHHHHHHHHhcCC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGN--TDLALSIFYAMRSSFD 133 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGr--VDeAlsLF~EM~srG~ 133 (566)
+.+|+-|...|+.+||...++++.. + .....+.+..+..++=|.+. .+...+||..+...|+
T Consensus 13 ~~lL~EY~~~~D~~EA~~cl~EL~~-p-~f~~e~V~~~i~~alE~~~~~~re~~~~LL~~L~~~~~ 76 (152)
T 2ion_A 13 DMLLKEYLLSGDISEAEHCLKELEV-P-HFHHELVYEAIVMVLESTGESAFKMILDLLKSLWKSST 76 (152)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHTC-G-GGHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCHHHHHHHHHHhCC-C-cchHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHCCC
Confidence 4678889999999999999999963 2 22346667888888887543 4667889999987765
No 223
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=38.83 E-value=1.3e+02 Score=28.30 Aligned_cols=92 Identities=13% Similarity=0.076 Sum_probs=56.6
Q ss_pred cCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccc---ccc-ccC--CC
Q 047498 78 GAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLV---DRW-KWS--RP 151 (566)
Q Consensus 78 KAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi---~~~-rw~--~P 151 (566)
..|+++.|+++.+++. +...|..|=+...+.|+++.|-+.|.+....+-- ..-|... ..+ ++. .=
T Consensus 17 ~lg~l~~A~e~a~~l~-------~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L--~~Ly~~tg~~e~L~kla~iA~ 87 (177)
T 3mkq_B 17 EYGNLDAALDEAKKLN-------DSITWERLIQEALAQGNASLAEMIYQTQHSFDKL--SFLYLVTGDVNKLSKMQNIAQ 87 (177)
T ss_dssp HTTCHHHHHHHHHHHC-------CHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHH--HHHHHHHTCHHHHHHHHHHHH
T ss_pred hcCCHHHHHHHHHHhC-------CHHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHH--HHHHHHhCCHHHHHHHHHHHH
Confidence 5799999999988874 5667999999999999999999988876532110 0001000 000 000 00
Q ss_pred ChHhHHHHHHHHHhcCCHHHHHHHHHH
Q 047498 152 DVSVYTSLVQSLAASLKVSDALRLIDD 178 (566)
Q Consensus 152 DVVTYNTLIdGLCKsGRVdEAlkLLeE 178 (566)
.--=||.-...+--.|++++++++|.+
T Consensus 88 ~~g~~n~af~~~l~lGdv~~~i~lL~~ 114 (177)
T 3mkq_B 88 TREDFGSMLLNTFYNNSTKERSSIFAE 114 (177)
T ss_dssp HTTCHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HCccHHHHHHHHHHcCCHHHHHHHHHH
Confidence 000156656666667777777777743
No 224
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=36.93 E-value=1.1e+02 Score=30.68 Aligned_cols=30 Identities=10% Similarity=-0.157 Sum_probs=17.3
Q ss_pred hhHHHHHHHHhcC---ChhHHHHHHHHHHhcCC
Q 047498 104 ECCLIINAAIDRG---NTDLALSIFYAMRSSFD 133 (566)
Q Consensus 104 TYNsLI~GlCKaG---rVDeAlsLF~EM~srG~ 133 (566)
.++.|=..|.+.| +.++|++.|++-...|.
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~ 210 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGT 210 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCC
Confidence 5555555555566 66666666665555543
No 225
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=35.78 E-value=69 Score=35.31 Aligned_cols=98 Identities=9% Similarity=-0.004 Sum_probs=72.3
Q ss_pred hhHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCc-ChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCcccccccc
Q 047498 68 VEEELLSRVSGAKDASEVLEIVAESSKRSGGVL-TVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRW 146 (566)
Q Consensus 68 ~~~aLIrGLCKAGrlDEAleLL~EM~er~Gg~P-DvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~ 146 (566)
+..+.+. +...++.+.|..+|....+.. | +..-++..++-+.+.|+++.|..+|+.-......
T Consensus 473 i~~A~lE-~~~~~d~e~Ar~ife~~Lk~~---p~~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~------------ 536 (679)
T 4e6h_A 473 LENAYIE-YHISKDTKTACKVLELGLKYF---ATDGEYINKYLDFLIYVNEESQVKSLFESSIDKISD------------ 536 (679)
T ss_dssp HHHHHHH-HTTTSCCHHHHHHHHHHHHHH---TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSS------------
T ss_pred HHHHHHH-HHhCCCHHHHHHHHHHHHHHC---CCchHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC------------
Confidence 3444444 222466999999999997532 3 3334578888888999999999999987654210
Q ss_pred ccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCC
Q 047498 147 KWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRVG 183 (566)
Q Consensus 147 rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rG 183 (566)
..=....|...++-=.+.|..+.+.++.++|.+.-
T Consensus 537 --~~~~~~lw~~~~~fE~~~G~~~~~~~v~~R~~~~~ 571 (679)
T 4e6h_A 537 --SHLLKMIFQKVIFFESKVGSLNSVRTLEKRFFEKF 571 (679)
T ss_dssp --TTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHS
T ss_pred --HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 00035678899999999999999999999998863
No 226
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=35.37 E-value=1e+02 Score=32.00 Aligned_cols=83 Identities=13% Similarity=0.047 Sum_probs=49.7
Q ss_pred cCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHH
Q 047498 78 GAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYT 157 (566)
Q Consensus 78 KAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYN 157 (566)
+.+..+.|.++|... ..++...++....+.+--.| .++.+.|.++|+...+.... .|+. +.
T Consensus 298 r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~-~~d~~~ar~ife~al~~~~~---------------~~~~--~~ 358 (493)
T 2uy1_A 298 KKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYA-TGSRATPYNIFSSGLLKHPD---------------STLL--KE 358 (493)
T ss_dssp HHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHH-HCCSHHHHHHHHHHHHHCTT---------------CHHH--HH
T ss_pred HcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHH-CCChHHHHHHHHHHHHHCCC---------------CHHH--HH
Confidence 467789999999888 32222222222223333333 23599999999987765321 1322 34
Q ss_pred HHHHHHHhcCCHHHHHHHHHHH
Q 047498 158 SLVQSLAASLKVSDALRLIDDI 179 (566)
Q Consensus 158 TLIdGLCKsGRVdEAlkLLeEM 179 (566)
..|+-+.+.|..+.|+.+|++.
T Consensus 359 ~yid~e~~~~~~~~aR~l~er~ 380 (493)
T 2uy1_A 359 EFFLFLLRIGDEENARALFKRL 380 (493)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHS
T ss_pred HHHHHHHHcCCHHHHHHHHHHH
Confidence 4566667777777777777775
No 227
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=34.79 E-value=1.1e+02 Score=31.95 Aligned_cols=77 Identities=13% Similarity=0.167 Sum_probs=53.0
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWS 149 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~ 149 (566)
+.+++-|-+.|..++|+++.++-.. + ..-..+.|++++|+++.+++
T Consensus 633 ~~~~~~l~~~~~~~~a~~~~~~~~~-----------~--f~~~l~~~~~~~A~~~~~~~--------------------- 678 (814)
T 3mkq_A 633 TKIARFLEGQEYYEEALNISPDQDQ-----------K--FELALKVGQLTLARDLLTDE--------------------- 678 (814)
T ss_dssp HHHHHHHHHTTCHHHHHHHCCCHHH-----------H--HHHHHHHTCHHHHHHHHTTC---------------------
T ss_pred HHHHHHHHhCCChHHheecCCCcch-----------h--eehhhhcCCHHHHHHHHHhh---------------------
Confidence 4556667778888888877644331 1 12246789999999986544
Q ss_pred CCChHhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 047498 150 RPDVSVYTSLVQSLAASLKVSDALRLIDDISR 181 (566)
Q Consensus 150 ~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~ 181 (566)
.|-..|..|=+-+-+.|+++.|.+.|..+..
T Consensus 679 -~~~~~W~~la~~al~~~~~~~A~~~y~~~~d 709 (814)
T 3mkq_A 679 -SAEMKWRALGDASLQRFNFKLAIEAFTNAHD 709 (814)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred -CcHhHHHHHHHHHHHcCCHHHHHHHHHHccC
Confidence 3445577777778888888888888877644
No 228
>2xzr_A Immunoglobulin-binding protein EIBD; cell adhesion, trimeric autotransporter adhesin, TAA; 2.80A {Enterobacteria phage p-eibd}
Probab=34.24 E-value=1.9e+02 Score=25.58 Aligned_cols=42 Identities=19% Similarity=0.299 Sum_probs=30.6
Q ss_pred HHhhhhhhhhhccc--hhHhHHHHHHHHHHhhhhhhhhchhhhh
Q 047498 453 MCQLENKIYAVGEP--SYRARKSRVKRVREGLQNSLRGRIELID 494 (566)
Q Consensus 453 ~~ql~nk~~avg~~--~y~ar~~rv~~~r~~l~~~l~~~iel~~ 494 (566)
|-|+|.||+.+=.. ..+.|..|++.+...++.+...--.-|.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~ri~~aig~~d~ri~~NtqaI~ 44 (114)
T 2xzr_A 1 MKQIEDKIEEILSKIYHIENEIARIKKLIGAIDGRVTRNTQSIE 44 (114)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHhcchHHHHHHHHhhhhHHHHhhHHHHH
Confidence 56888888877553 4468999999999999988665544444
No 229
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=34.20 E-value=1.7e+02 Score=29.46 Aligned_cols=42 Identities=10% Similarity=0.034 Sum_probs=21.7
Q ss_pred HHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHH
Q 047498 83 SEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAM 128 (566)
Q Consensus 83 DEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM 128 (566)
.++++.+....+ .| +...+..|-..|-..|.++++.+-....
T Consensus 126 ~~a~~~~~~a~~-~g---~~~a~~~Lg~~y~~~~~~~~~~~~a~~~ 167 (452)
T 3e4b_A 126 VNAQQQISQWQA-AG---YPEAGLAQVLLYRTQGTYDQHLDDVERI 167 (452)
T ss_dssp CCHHHHHHHHHH-HT---CTTHHHHHHHHHHHHTCGGGGHHHHHHH
T ss_pred HHHHHHHHHHHH-CC---CHHHHHHHHHHHHcCCCcccCHHHHHHH
Confidence 345555555543 12 2345566666666666555555553333
No 230
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=31.09 E-value=1.2e+02 Score=33.58 Aligned_cols=9 Identities=44% Similarity=0.744 Sum_probs=3.5
Q ss_pred HHHHHHHHH
Q 047498 432 LQSRIKDLK 440 (566)
Q Consensus 432 l~~r~~~l~ 440 (566)
+-.||++|+
T Consensus 62 ltkrINELK 70 (562)
T 3ghg_A 62 FTNRINKLK 70 (562)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333333333
No 231
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=30.78 E-value=21 Score=25.84 Aligned_cols=11 Identities=36% Similarity=0.558 Sum_probs=8.8
Q ss_pred HHHhhhhhhhh
Q 047498 452 RMCQLENKIYA 462 (566)
Q Consensus 452 r~~ql~nk~~a 462 (566)
||-|||.|.+.
T Consensus 1 RMnQLEdKvEe 11 (33)
T 3c3g_A 1 RMKXIEXKLXE 11 (33)
T ss_dssp CHHHHHHHHHH
T ss_pred CccHHHHHHHH
Confidence 68899988764
No 232
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=30.77 E-value=1.8e+02 Score=32.24 Aligned_cols=16 Identities=19% Similarity=0.322 Sum_probs=11.6
Q ss_pred hhhhHHHHHHHHHHhH
Q 047498 520 SSAESISEQIQQIMEL 535 (566)
Q Consensus 520 ~~~~~i~eqi~~l~e~ 535 (566)
..++.|+.|++|+.-.
T Consensus 176 ~sY~~~QKQLeQv~a~ 191 (562)
T 3ghg_A 176 KDYEDQQKQLEQVIAK 191 (562)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhhc
Confidence 4677888888887543
No 233
>2ion_A PDCD4, programmed cell death 4, PDCD4; alpha-helical, antitumor protein; 1.57A {Mus musculus} SCOP: a.118.1.14 PDB: 2ios_A 2iol_A
Probab=30.30 E-value=73 Score=28.90 Aligned_cols=65 Identities=12% Similarity=0.131 Sum_probs=51.6
Q ss_pred hHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHHHHHHHHHhcC-C-HHHHHHHHHHHHhC
Q 047498 105 CCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQSLAASL-K-VSDALRLIDDISRV 182 (566)
Q Consensus 105 YNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsG-R-VdEAlkLLeEM~~r 182 (566)
.+.+|+=|...|++++|...++++..... -..+++..+..+|=|.+ + .+...+||..+...
T Consensus 12 i~~lL~EY~~~~D~~EA~~cl~EL~~p~f-----------------~~e~V~~~i~~alE~~~~~~re~~~~LL~~L~~~ 74 (152)
T 2ion_A 12 IDMLLKEYLLSGDISEAEHCLKELEVPHF-----------------HHELVYEAIVMVLESTGESAFKMILDLLKSLWKS 74 (152)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHTCGGG-----------------HHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHhCCCcc-----------------hHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHC
Confidence 57899999999999999999999963222 23677888999998853 3 56788999999988
Q ss_pred CCCC
Q 047498 183 GVSP 186 (566)
Q Consensus 183 GcsP 186 (566)
|+-+
T Consensus 75 ~~is 78 (152)
T 2ion_A 75 STIT 78 (152)
T ss_dssp TCSC
T ss_pred CCcC
Confidence 8655
No 234
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=30.23 E-value=21 Score=25.77 Aligned_cols=11 Identities=64% Similarity=0.703 Sum_probs=8.9
Q ss_pred HHHhhhhhhhh
Q 047498 452 RMCQLENKIYA 462 (566)
Q Consensus 452 r~~ql~nk~~a 462 (566)
||-|||.|++.
T Consensus 1 RMnQLEdKVEe 11 (33)
T 2wq1_A 1 RMKQLEDKIEE 11 (33)
T ss_dssp CHHHHHHHHHH
T ss_pred CchHHHHHHHH
Confidence 68899998764
No 235
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=29.31 E-value=1.7e+02 Score=26.36 Aligned_cols=51 Identities=18% Similarity=0.148 Sum_probs=33.8
Q ss_pred HHhcCChhHHHHHHHHHHhcCCCCCCCccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCC
Q 047498 112 AIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGV 184 (566)
Q Consensus 112 lCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGc 184 (566)
+..+|++++|+.+.+.++ -||++.+-.|-.+ |.|.-+++..-+.+|-.+|-
T Consensus 50 LmNrG~Yq~Al~l~~~~c--------------------~pdlepw~ALce~--rlGl~s~le~rL~~la~sg~ 100 (116)
T 2p58_C 50 LMNRGDYASALQQGNKLA--------------------YPDLEPWLALCEY--RLGLGSALESRLNRLARSQD 100 (116)
T ss_dssp HHHTTCHHHHHHHHTTSC--------------------CGGGHHHHHHHHH--HHTCHHHHHHHHHHHTTCCC
T ss_pred HHcchhHHHHHHhcCCCC--------------------CchHHHHHHHHHH--hcccHHHHHHHHHHHHhCCC
Confidence 445666666666654443 4888887776543 67888888777777777663
No 236
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=28.62 E-value=1.5e+02 Score=31.41 Aligned_cols=96 Identities=11% Similarity=0.000 Sum_probs=61.7
Q ss_pred HcCC--CHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcC-ChhHHHHHHHHHHhcCCCCCCCccccccccccCCCCh
Q 047498 77 SGAK--DASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRG-NTDLALSIFYAMRSSFDQGLSENGTLVDRWKWSRPDV 153 (566)
Q Consensus 77 CKAG--rlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaG-rVDeAlsLF~EM~srG~~PdvvTYaLi~~~rw~~PDV 153 (566)
.+.| +++++++.++++.+.. .=|-.+|+---..+.+.| ..++|++.++++.+.-. =|.
T Consensus 118 ~~l~~~~~~~el~~~~k~l~~d--~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p-----------------~n~ 178 (567)
T 1dce_A 118 SRLPEPNWARELELCARFLEAD--ERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNF-----------------SNY 178 (567)
T ss_dssp HTCSSCCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTC-----------------CCH
T ss_pred HHcccccHHHHHHHHHHHHhhc--cccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCC-----------------CCc
Confidence 3456 6688888888887531 225555666556666777 77888888887765433 244
Q ss_pred HhHHHHHHHHHh--------------cCCHHHHHHHHHHHHhCCCCCCCccccc
Q 047498 154 SVYTSLVQSLAA--------------SLKVSDALRLIDDISRVGVSPGEEVPFG 193 (566)
Q Consensus 154 VTYNTLIdGLCK--------------sGRVdEAlkLLeEM~~rGcsPdDvVTYn 193 (566)
..|+-.-..|.+ .+++++|++.+++... +.|+|.-.|+
T Consensus 179 saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~--~~P~~~saW~ 230 (567)
T 1dce_A 179 SSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFF--TDPNDQSAWF 230 (567)
T ss_dssp HHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHH--HCSSCSHHHH
T ss_pred cHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHh--hCCCCccHHH
Confidence 445544444444 2678999999998886 4586654443
No 237
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=28.57 E-value=24 Score=25.67 Aligned_cols=11 Identities=45% Similarity=0.616 Sum_probs=9.0
Q ss_pred HHHhhhhhhhh
Q 047498 452 RMCQLENKIYA 462 (566)
Q Consensus 452 r~~ql~nk~~a 462 (566)
||-|||.|.+.
T Consensus 2 RMnQLEdKVEe 12 (34)
T 3c3f_A 2 RMXQIEXKLEX 12 (34)
T ss_dssp CHHHHHHHHHH
T ss_pred cHHHHHHHHHH
Confidence 78999998764
No 238
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=28.16 E-value=1.7e+02 Score=22.32 Aligned_cols=39 Identities=33% Similarity=0.411 Sum_probs=23.2
Q ss_pred HHHHhhhhHHHHHHHHHHHHH-HHHHHHHHHHHHhhhhhh
Q 047498 422 RQQLLSQYDLLQSRIKDLKEA-AEKEVWMLARMCQLENKI 460 (566)
Q Consensus 422 ~qqll~qy~~l~~r~~~l~~~-~~~~v~~lar~~ql~nk~ 460 (566)
-.+|=+.-|.||.|+..|..+ .+-.-.+-.|+-+||+|+
T Consensus 7 v~~Le~~ld~LqTr~ArLlae~~ssq~KlKqRit~lE~~v 46 (46)
T 3swy_A 7 VEQLGSSLDTLQTRFARLLAEYNATQMKMKQRLSQLESQV 46 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 345556666666666665544 333455556777777764
No 239
>2l2l_B Methyl-CPG-binding domain protein 2; DNA methylation, coiled-coil, NURD, MBD2, P66alpha, transfer; NMR {Homo sapiens}
Probab=27.51 E-value=30 Score=25.49 Aligned_cols=24 Identities=29% Similarity=0.542 Sum_probs=17.8
Q ss_pred cchhHhHHHHHHHHHHhhhhhhhh
Q 047498 465 EPSYRARKSRVKRVREGLQNSLRG 488 (566)
Q Consensus 465 ~~~y~ar~~rv~~~r~~l~~~l~~ 488 (566)
+.--+.--+||+.||+.|++-|.+
T Consensus 9 e~DIr~QE~rV~~aR~rL~eaL~a 32 (36)
T 2l2l_B 9 DEDIRKQEERVQQVRKKLEEALMA 32 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc
Confidence 333445568999999999998753
No 240
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=27.34 E-value=26 Score=25.52 Aligned_cols=12 Identities=25% Similarity=0.448 Sum_probs=9.0
Q ss_pred HHHhhhhhhhhh
Q 047498 452 RMCQLENKIYAV 463 (566)
Q Consensus 452 r~~ql~nk~~av 463 (566)
||-|||.|.+.+
T Consensus 2 RMnQledKvEel 13 (34)
T 2r2v_A 2 KLKQVADKLEEV 13 (34)
T ss_dssp CHHHHHHHHHHH
T ss_pred chhHHHHHHHHH
Confidence 688888887654
No 241
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=27.01 E-value=27 Score=25.45 Aligned_cols=11 Identities=45% Similarity=0.631 Sum_probs=8.1
Q ss_pred HHHhhhhhhhh
Q 047498 452 RMCQLENKIYA 462 (566)
Q Consensus 452 r~~ql~nk~~a 462 (566)
||-|||.|.+.
T Consensus 2 RMnQLEdKvEe 12 (34)
T 2bni_A 2 RMKQIEDKLEE 12 (34)
T ss_dssp -CHHHHHHHHH
T ss_pred chhHHHHHHHH
Confidence 78899988764
No 242
>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A
Probab=26.33 E-value=2.5e+02 Score=29.09 Aligned_cols=41 Identities=24% Similarity=0.406 Sum_probs=29.6
Q ss_pred HhhhhhHHHHHHHHHHh-HHhHHHHHhHhhhhchHHHHHhhc
Q 047498 518 AVSSAESISEQIQQIME-LENLEEKWRLQAEANDEAERLINS 558 (566)
Q Consensus 518 ~~~~~~~i~eqi~~l~e-~~~l~~~wr~qaea~de~erll~s 558 (566)
...|.+.+..+|+.|-+ -+.|+++-|.|++.+-|.||-+++
T Consensus 203 ~~~n~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 244 (373)
T 3hhm_B 203 IMHNYDKLKSRISEIIDSRRRLEEDLKKQAAEYREIDKRMNS 244 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 34455556666665543 357888999999999999998774
No 243
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A
Probab=25.95 E-value=78 Score=35.01 Aligned_cols=89 Identities=21% Similarity=0.316 Sum_probs=59.7
Q ss_pred ccCCCcccccchHHHHHHHHhhh----h-----HHHHH----HHHHHHHHHHHHHHHHHHHHhhhhhhh--hhccchhHh
Q 047498 406 PQLSQLPQKSVDTIAIRQQLLSQ----Y-----DLLQS----RIKDLKEAAEKEVWMLARMCQLENKIY--AVGEPSYRA 470 (566)
Q Consensus 406 p~l~qlp~~~v~~~a~~qqll~q----y-----~~l~~----r~~~l~~~~~~~v~~lar~~ql~nk~~--avg~~~y~a 470 (566)
..+-+++.+..|+...|.+|.-. | +.|++ ++.+|.+.-++=..--.++|.-|||-. .|=.-.|..
T Consensus 486 ~~~~~~~~~~~~~l~~k~~l~~~l~~~y~~~d~~~l~~l~~~~~~~l~~~~~~l~~~~~~~Wl~~~kp~Gle~~~~R~~g 565 (627)
T 2epl_X 486 AYIFETQAQLNALLALKISITSGIQKAYRNGDKEHLSALAEKDFPQLYQMVEDFSDQFSRQWQQENKIFGLDTIDIRFGG 565 (627)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHBCSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcCchHHHHHHHHH
Confidence 44556778888888888877643 2 22222 333444444443445568999999976 333345666
Q ss_pred HHHHHHHHHHhhhhhhhhchhhhh
Q 047498 471 RKSRVKRVREGLQNSLRGRIELID 494 (566)
Q Consensus 471 r~~rv~~~r~~l~~~l~~~iel~~ 494 (566)
=+.|+++++..|++-|.|+|+=|+
T Consensus 566 ~~~R~~~~~~r~~~~~~g~~~~~~ 589 (627)
T 2epl_X 566 LLKRIKRAQERLEQFISGQIDCVE 589 (627)
T ss_dssp HHHHHHHHHHHHHHHHHTSSSCCG
T ss_pred HHHHHHHHHHHHHHHHcCCcCChh
Confidence 678999999999999999987665
No 244
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=25.67 E-value=2.2e+02 Score=26.28 Aligned_cols=28 Identities=7% Similarity=0.331 Sum_probs=25.0
Q ss_pred ChHhHHHHHHHHHhcCCHHHHHHHHHHH
Q 047498 152 DVSVYTSLVQSLAASLKVSDALRLIDDI 179 (566)
Q Consensus 152 DVVTYNTLIdGLCKsGRVdEAlkLLeEM 179 (566)
..+||.-+++.+.+...+-+++..|+.+
T Consensus 228 G~Is~~Ef~~~~~~~~~l~~~l~~~d~~ 255 (256)
T 2jul_A 228 GVVTIDEFLETCQKDENIMNSMQLFENV 255 (256)
T ss_dssp CSBCHHHHHHHHHHCSSHHHHHHHHHHH
T ss_pred CcEeHHHHHHHHHhCHHHHHHHHhhccc
Confidence 4689999999999999999999998876
No 245
>2p90_A Hypothetical protein CGL1923; structural genomics, PSI-2, MCSG structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032} SCOP: c.56.8.1
Probab=25.29 E-value=61 Score=32.82 Aligned_cols=33 Identities=33% Similarity=0.394 Sum_probs=21.3
Q ss_pred CCCcccceeccccccccCccccceeEEee-cCCC
Q 047498 274 PSGMARTHRFATETVDLPAQVGERITVSS-AAPS 306 (566)
Q Consensus 274 p~g~art~r~~t~t~~~paq~gervtv~~-a~~~ 306 (566)
|----|-.+|+.+-+++=.+-|=+-+|.. +-|.
T Consensus 110 peP~~~w~~f~~~vl~~a~~~gV~~vv~Lggl~~ 143 (319)
T 2p90_A 110 PEPDLRWGDFSNAVVDLVEKFGVENTICLYAAPM 143 (319)
T ss_dssp ECCSBCHHHHHHHHHHHHHHTTCCEEEEEEEEEE
T ss_pred CCChHHHHHHHHHHHHHHHHcCCCEEEEEeCccC
Confidence 44445668888888888877775555533 3344
No 246
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=24.31 E-value=1.9e+02 Score=25.20 Aligned_cols=62 Identities=10% Similarity=0.016 Sum_probs=40.3
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhh--hHHHHHHHHhcCChhHHHHHHHHHHhcCCCCC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDE--CCLIINAAIDRGNTDLALSIFYAMRSSFDQGL 136 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvT--YNsLI~GlCKaGrVDeAlsLF~EM~srG~~Pd 136 (566)
.+.|+--|+.|+.+-...+++.+.+ .+..+|... -.+.++-.|+.|+.+ +++.+.+.|..++
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~g~~~~ 73 (241)
T 1k1a_A 10 DTPLHIAVVQGNLPAVHRLVNLFQQ-GGRELDIYNNLRQTPLHLAVITTLPS----VVRLLVTAGASPM 73 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHTTCHH----HHHHHHHTTCCTT
T ss_pred CcHHHHHHHcCCHHHHHHHHHHHHh-cCCCCCcccccCCCHHHHHHHcCCHH----HHHHHHHcCCCcc
Confidence 4567778889999988888886653 333334332 246677788888875 4445556777543
No 247
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=23.81 E-value=2.1e+02 Score=29.67 Aligned_cols=91 Identities=8% Similarity=0.027 Sum_probs=66.5
Q ss_pred chhHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCcccccccc
Q 047498 67 VVEEELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRW 146 (566)
Q Consensus 67 ~~~~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~ 146 (566)
++--+.+.-.+ .++.+.|..+|....+..+..|+ -+...|+-..+.|+.+.|..+|+...
T Consensus 322 ~i~~A~lE~~~-~~d~~~ar~ife~al~~~~~~~~--~~~~yid~e~~~~~~~~aR~l~er~~----------------- 381 (493)
T 2uy1_A 322 FIYCAFIEYYA-TGSRATPYNIFSSGLLKHPDSTL--LKEEFFLFLLRIGDEENARALFKRLE----------------- 381 (493)
T ss_dssp HHHHHHHHHHH-HCCSHHHHHHHHHHHHHCTTCHH--HHHHHHHHHHHHTCHHHHHHHHHHSC-----------------
T ss_pred HHHHHHHHHHH-CCChHHHHHHHHHHHHHCCCCHH--HHHHHHHHHHHcCCHHHHHHHHHHHH-----------------
Confidence 34445555333 34799999999998753322333 35667888899999999999999862
Q ss_pred ccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 047498 147 KWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISR 181 (566)
Q Consensus 147 rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~ 181 (566)
-.+.-+...++--.+.|..+.+.++++++..
T Consensus 382 ----k~~~lw~~~~~fE~~~G~~~~~r~v~~~~~~ 412 (493)
T 2uy1_A 382 ----KTSRMWDSMIEYEFMVGSMELFRELVDQKMD 412 (493)
T ss_dssp ----CBHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 1245577778877888999999999998875
No 248
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=23.38 E-value=34 Score=24.90 Aligned_cols=11 Identities=55% Similarity=0.764 Sum_probs=9.4
Q ss_pred HHHhhhhhhhh
Q 047498 452 RMCQLENKIYA 462 (566)
Q Consensus 452 r~~ql~nk~~a 462 (566)
||-|||+|.+.
T Consensus 2 RMnQLE~kVEe 12 (34)
T 2oxj_A 2 RMXQLEXKVXE 12 (34)
T ss_dssp CHHHHHHHHHH
T ss_pred cHHHHHHHHHH
Confidence 79999999765
No 249
>1gqe_A Release factor 2, RF2; protein synthesis, ribosome, macromolecular mimicry, translation; 1.81A {Escherichia coli} SCOP: e.38.1.1 PDB: 1mi6_A 1ml5_Z*
Probab=23.27 E-value=3.8e+02 Score=28.10 Aligned_cols=53 Identities=15% Similarity=0.194 Sum_probs=26.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccchh---HhHHHHHHHHHHhhhhh
Q 047498 429 YDLLQSRIKDLKEAAEKEVWMLARMCQLENKIYAVGEPSY---RARKSRVKRVREGLQNS 485 (566)
Q Consensus 429 y~~l~~r~~~l~~~~~~~v~~lar~~ql~nk~~avg~~~y---~ar~~rv~~~r~~l~~~ 485 (566)
.+.|..|++.+...-.-| .+..|.-.||.+|.. |.. ..+..++-+-...|+..
T Consensus 11 ~~~~~~~~~~~~~~~~l~-~~~~r~~el~~~~~~---p~~w~d~~~~~~~~ke~~~l~~~ 66 (365)
T 1gqe_A 11 IQDLTERSDVLRGYLDYD-AKKERLEEVNAELEQ---PDVWNEPERAQALGKERSSLEAV 66 (365)
T ss_dssp HHHHHHHHHHHHHHTTHH-HHHHHHHHHHHHHHS---GGGGGSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHH-HHHHHHHHHHHHhcC---CccccCHHHHHHHHHHHHHHHHH
Confidence 344555555444433222 355677777777754 333 23444444444444443
No 250
>3e35_A Uncharacterized protein SCO1997; alpha/beta/alpha structure, actinobacteria-specific protein, conserved protein, unknown function; 2.20A {Streptomyces coelicolor}
Probab=23.18 E-value=79 Score=32.37 Aligned_cols=26 Identities=27% Similarity=0.382 Sum_probs=17.9
Q ss_pred ccceeccccccccCccccceeEEeec
Q 047498 278 ARTHRFATETVDLPAQVGERITVSSA 303 (566)
Q Consensus 278 art~r~~t~t~~~paq~gervtv~~a 303 (566)
-|-.||+.+-.++=.+-|=+-+|...
T Consensus 117 ~~w~~f~~avl~~a~~~gV~~vv~Lg 142 (325)
T 3e35_A 117 VEWERFAAAVGQIVERLGVRLSVSFH 142 (325)
T ss_dssp SCHHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred chHHHHHHHHHHHHHHcCCCEEEEEe
Confidence 45578888888887777766555444
No 251
>2y69_E Cytochrome C oxidase subunit 5A; electron transport, complex IV, proton pumps, membrane prote; HET: TPO HEA CHD PEK PGV DMU; 1.95A {Bos taurus}
Probab=22.97 E-value=4.7e+02 Score=24.50 Aligned_cols=72 Identities=11% Similarity=-0.003 Sum_probs=56.5
Q ss_pred ccccccccchhHHHHHHHHcCC-CHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhc
Q 047498 59 SLSESENGVVEEELLSRVSGAK-DASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSS 131 (566)
Q Consensus 59 ~~~~~~~~~~~~aLIrGLCKAG-rlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~sr 131 (566)
...+..++.+|.-...-|-+.. |.=|..+-+..... ....|+.....+-+.++-+-+++-.|+++|+..+.+
T Consensus 45 ~h~~Et~EeFdaRy~~~F~~~~iD~wElrrglN~l~~-~DlVPeP~Ii~AALrAcRRvNDfalAVR~lE~vK~K 117 (152)
T 2y69_E 45 HGSHETDEEFDARWVTYFNKPDIDAWELRKGMNTLVG-YDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDK 117 (152)
T ss_dssp ----CCHHHHHHHHHHHHTCTTCCHHHHHHHHHHHTT-SSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHcCCcCccHHHHHHHHHHHhc-cccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 3444567778888888777777 77777777777764 456899999999999999999999999999998865
No 252
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=22.61 E-value=1.8e+02 Score=30.91 Aligned_cols=20 Identities=15% Similarity=0.290 Sum_probs=11.3
Q ss_pred HHHhhhhHHHHHHHHHHHHH
Q 047498 423 QQLLSQYDLLQSRIKDLKEA 442 (566)
Q Consensus 423 qqll~qy~~l~~r~~~l~~~ 442 (566)
+.+-.++++|..+++++.+.
T Consensus 63 r~~~~rIe~L~~~L~~~s~s 82 (390)
T 1deq_A 63 QDFTSRINKLRDSLFNYQKN 82 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHh
Confidence 44555566666666665444
No 253
>3ygs_P Procaspase 9; apoptosis, caspase activation, caspase recruitment, recognition complex; 2.50A {Homo sapiens} SCOP: a.77.1.3
Probab=22.57 E-value=1.7e+02 Score=24.34 Aligned_cols=53 Identities=17% Similarity=0.281 Sum_probs=39.2
Q ss_pred chhHHHHHHHHcC---CCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHH
Q 047498 67 VVEEELLSRVSGA---KDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSI 124 (566)
Q Consensus 67 ~~~~aLIrGLCKA---GrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsL 124 (566)
.|....++..-.. .+.+.|.++++....+ | | -+|+++++++++.|+.+.|--|
T Consensus 35 vlt~~~~e~I~~~~~~t~~~~ar~Lld~L~~r-G--~--~Af~~F~~aL~et~~~~La~lL 90 (97)
T 3ygs_P 35 LFRPHMIEDIQRAGSGSRRDQARQLIIDLETR-G--S--QALPLFISCLEDTGQDMLASFL 90 (97)
T ss_dssp SSCHHHHHHHHTSTTCCHHHHHHHHHHHHTTS-C--T--THHHHHHHHHHTTTCHHHHHHH
T ss_pred CCCHHHHHHHHhccCCChHHHHHHHHHHHHHc-C--h--HHHHHHHHHHHHcCcHHHHHHH
Confidence 4555555555543 5799999999999853 2 3 3799999999998988877554
No 254
>2d5k_A DPS, DPS family protein; four helix bundle, metal binding protein; 1.85A {Staphylococcus aureus subsp}
Probab=21.61 E-value=1.8e+02 Score=25.60 Aligned_cols=39 Identities=8% Similarity=0.166 Sum_probs=30.2
Q ss_pred cCCCcccccchHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 047498 407 QLSQLPQKSVDTIAIRQQLLSQYDLLQSRIKDLKEAAEKE 446 (566)
Q Consensus 407 ~l~qlp~~~v~~~a~~qqll~qy~~l~~r~~~l~~~~~~~ 446 (566)
.++..|... ++..+=+.+|..+..+-.+++++.+.++++
T Consensus 82 ~i~~~~~~~-~~~e~l~~~l~~e~~~~~~~~~~i~~a~~~ 120 (156)
T 2d5k_A 82 IVKEAAKGY-SAEQMVEELSQDFTNISKQLENAIEIAGNA 120 (156)
T ss_dssp SSCCCCSCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 344555554 888888889999999999999888877664
No 255
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=21.53 E-value=40 Score=24.38 Aligned_cols=11 Identities=55% Similarity=0.700 Sum_probs=7.6
Q ss_pred HHHhhhhhhhh
Q 047498 452 RMCQLENKIYA 462 (566)
Q Consensus 452 r~~ql~nk~~a 462 (566)
||-|||.|.+.
T Consensus 1 RM~QLE~kVEe 11 (33)
T 3m48_A 1 RMAQLEAKVEE 11 (33)
T ss_dssp --CHHHHHHHH
T ss_pred CccHHHHHHHH
Confidence 78999999765
No 256
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=21.37 E-value=1.9e+02 Score=23.88 Aligned_cols=91 Identities=9% Similarity=-0.029 Sum_probs=49.1
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhh--HHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCccccccccc
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDEC--CLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENGTLVDRWK 147 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTY--NsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTYaLi~~~r 147 (566)
.+.+.--++.|+.+....+++... ..++.... .+.++-.|+.|+.+ +++.+.+.|..++....
T Consensus 9 ~~~l~~A~~~g~~~~v~~ll~~~~----~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~g~~~~~~~~------- 73 (165)
T 3twr_A 9 DRQLLEAAKAGDVETVKKLCTVQS----VNCRDIEGRQSTPLHFAAGYNRVS----VVEYLLQHGADVHAKDK------- 73 (165)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTTT----TTCCCTTTTCCCHHHHHHHTTCHH----HHHHHHHTTCCTTCCCT-------
T ss_pred hHHHHHHHHhCCHHHHHHHHHcCC----CCccccccCCCCHHHHHHHcChHH----HHHHHHhcCCCCCccCC-------
Confidence 344555677888877777765432 11222222 36677778888854 44555556764332221
Q ss_pred cCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCC
Q 047498 148 WSRPDVSVYTSLVQSLAASLKVSDALRLIDDISRVGVSP 186 (566)
Q Consensus 148 w~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~rGcsP 186 (566)
. ..+.++--|+.|+.+ +++.+.+.|..+
T Consensus 74 ------~-g~t~L~~A~~~~~~~----~v~~Ll~~g~~~ 101 (165)
T 3twr_A 74 ------G-GLVPLHNACSYGHYE----VAELLVKHGAVV 101 (165)
T ss_dssp ------T-SCCHHHHHHHTTCHH----HHHHHHHTTCCT
T ss_pred ------C-CCCHHHHHHHcCcHH----HHHHHHhCCCCC
Confidence 1 113345556667655 444445567766
No 257
>1a1d_A RNA polymerase; RPB8, OB fold, eukaryotic, yeast, nucleotidyltransferase; NMR {Saccharomyces cerevisiae} SCOP: b.40.4.8 PDB: 1i3q_H 1i50_H 1i6h_H 1k83_H* 1nik_H 1nt9_H 1pqv_H 1r5u_H 1r9s_H* 1r9t_H* 1sfo_H* 1twa_H* 1twc_H* 1twf_H* 1twg_H* 1twh_H* 1wcm_H 1y1v_H 1y1w_H 1y1y_H ...
Probab=21.31 E-value=64 Score=29.95 Aligned_cols=35 Identities=26% Similarity=0.335 Sum_probs=28.0
Q ss_pred cCccccceeEEeecCCCccccccCcccccCCCCCCCC
Q 047498 290 LPAQVGERITVSSAAPSNVYREVGPFKFSPKALNFYP 326 (566)
Q Consensus 290 ~paq~gervtv~~a~~~n~~r~~g~~~~~~~~p~~~p 326 (566)
-|-++||+.|++.|.-=+ ..+.||+.+...++|+|
T Consensus 47 yPv~~gd~l~l~LastL~--~dg~~~~~~~d~~~~~~ 81 (146)
T 1a1d_A 47 FPVAAQDSLTVTIASSLN--LEDTPANDSSATRSWRP 81 (146)
T ss_pred eccCCCCEEEEEEecccC--cCCCcccccccCccccc
Confidence 488999999999998443 33458888888889998
No 258
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=21.23 E-value=41 Score=24.47 Aligned_cols=11 Identities=18% Similarity=0.317 Sum_probs=7.8
Q ss_pred HHHhhhhhhhh
Q 047498 452 RMCQLENKIYA 462 (566)
Q Consensus 452 r~~ql~nk~~a 462 (566)
||-|||.|.+.
T Consensus 2 RMnQLEdkVEe 12 (34)
T 2hy6_A 2 KVKQLADAVEE 12 (34)
T ss_dssp -CHHHHHHHHH
T ss_pred chhHHHHHHHH
Confidence 78888888654
No 259
>3eiq_C Programmed cell death protein 4; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Mus musculus}
Probab=21.19 E-value=2e+02 Score=29.67 Aligned_cols=62 Identities=16% Similarity=0.037 Sum_probs=48.4
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCC--hhHHHHHHHHHHhcCC
Q 047498 70 EELLSRVSGAKDASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGN--TDLALSIFYAMRSSFD 133 (566)
Q Consensus 70 ~aLIrGLCKAGrlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGr--VDeAlsLF~EM~srG~ 133 (566)
+.+|.-|...|+.+||...++++.- +... ..+.+.++..++=|.+. .+...++|..+...|+
T Consensus 221 ~~lL~EY~~s~D~~EA~~ci~EL~~-p~fh-he~V~~av~~aLE~~~~~~re~~~~LL~~L~~~gl 284 (358)
T 3eiq_C 221 DMLLKEYLLSGDISEAEHCLKELEV-PHFH-HELVYEAIVMVLESTGESAFKMILDLLKSLWKSST 284 (358)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHCC-TTCH-HHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhccCCCHHHHHHHHHHccC-Ccch-HHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCCC
Confidence 5788889999999999999999973 3333 35557888888877653 4668889999987765
No 260
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=21.12 E-value=3.4e+02 Score=22.17 Aligned_cols=78 Identities=19% Similarity=0.246 Sum_probs=49.1
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccchhHhHHHHHHHHHHhhhhhhhhchhhhhh----HHH
Q 047498 423 QQLLSQYDLLQSRIKDLKEAAEKEVWMLARMCQLENKIYAVGEPSYRARKSRVKRVREGLQNSLRGRIELIDS----YAR 498 (566)
Q Consensus 423 qqll~qy~~l~~r~~~l~~~~~~~v~~lar~~ql~nk~~avg~~~y~ar~~rv~~~r~~l~~~l~~~iel~~~----ya~ 498 (566)
|+++.+|..++.+++.+.+.- - .+...+.....|.+.|+ ++|. |..
T Consensus 4 Q~~i~~f~~lq~~~~~l~~q~----------~------------~l~~~~~e~~~~~~EL~--------~l~~d~~vy~~ 53 (107)
T 1fxk_A 4 QHQLAQFQQLQQQAQAISVQK----------Q------------TVEMQINETQKALEELS--------RAADDAEVYKS 53 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH----------H------------HHHHHHHHHHHHHHHHH--------HSCTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHH----------H------------HHHHHHHHHHHHHHHHH--------cCCCCchHHHH
Confidence 678888999988888776521 1 12233334444444443 3332 444
Q ss_pred hhhhheeeeehhhhHHHHHHhhhhhHHHHHHHHHH
Q 047498 499 ISSMIEIEIEMDSDVLAAEAVSSAESISEQIQQIM 533 (566)
Q Consensus 499 ~~~mieievemd~dv~aae~~~~~~~i~eqi~~l~ 533 (566)
|. ++=|+.|.+-.-.++-...+.|++.|+.|.
T Consensus 54 iG---~vfv~~~~~e~~~~L~~~~e~i~~~i~~le 85 (107)
T 1fxk_A 54 SG---NILIRVAKDELTEELQEKLETLQLREKTIE 85 (107)
T ss_dssp ET---TEEEEECHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Hh---HHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44 345788888888888888888888887775
No 261
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B*
Probab=20.94 E-value=4.7e+02 Score=24.85 Aligned_cols=99 Identities=16% Similarity=0.081 Sum_probs=59.0
Q ss_pred CHHHHHHHHHHHhhcCCCCcChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCCCcc-ccccccccCCCChHhHHHH
Q 047498 81 DASEVLEIVAESSKRSGGVLTVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGLSENG-TLVDRWKWSRPDVSVYTSL 159 (566)
Q Consensus 81 rlDEAleLL~EM~er~Gg~PDvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~PdvvTY-aLi~~~rw~~PDVVTYNTL 159 (566)
..++..+++....+..|...+......|.. ++ .|++..|..++++....+- +.++. .+..... ..+....-.+
T Consensus 179 ~~~~~~~~l~~~~~~~~~~~~~~a~~~l~~-~~-~G~~r~~~~~l~~~~~~~~--~~i~~~~v~~~~~--~~~~~~~~~l 252 (373)
T 1jr3_A 179 DVEQIRHQLEHILNEEHIAHEPRALQLLAR-AA-EGSLRDALSLTDQAIASGD--GQVSTQAVSAMLG--TLDDDQALSL 252 (373)
T ss_dssp CHHHHHHHHHHHHHHHTCCBCHHHHHHHHH-HS-SSCHHHHHHHHHHHHHHTT--TCBCHHHHHHHTT--CCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCHHHHHHHHH-HC-CCCHHHHHHHHHHHHHhcC--CcccHHHHHHHhC--CCCHHHHHHH
Confidence 456667777666432343344444433333 33 7899999998888764431 22332 1111111 1223334467
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhCCCCC
Q 047498 160 VQSLAASLKVSDALRLIDDISRVGVSP 186 (566)
Q Consensus 160 IdGLCKsGRVdEAlkLLeEM~~rGcsP 186 (566)
++.+.+ |+.++|+++++++...|..|
T Consensus 253 ~~~~~~-~~~~~~~~~~~~l~~~g~~~ 278 (373)
T 1jr3_A 253 VEAMVE-ANGERVMALINEAAARGIEW 278 (373)
T ss_dssp HHHHHH-TCHHHHHHHHHHHHHTTCCH
T ss_pred HHHHHc-CCHHHHHHHHHHHHHhCcCH
Confidence 777654 68999999999999999988
No 262
>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2
Probab=20.74 E-value=3e+02 Score=26.46 Aligned_cols=113 Identities=10% Similarity=0.043 Sum_probs=72.6
Q ss_pred cccchhH--HHHHHHHcCCCHHHHHHHHHHHhhcCCCCc-----ChhhhHHHHHHHHhcCChhHHHHHHHHHHhcCCCCC
Q 047498 64 ENGVVEE--ELLSRVSGAKDASEVLEIVAESSKRSGGVL-----TVDECCLIINAAIDRGNTDLALSIFYAMRSSFDQGL 136 (566)
Q Consensus 64 ~~~~~~~--aLIrGLCKAGrlDEAleLL~EM~er~Gg~P-----DvvTYNsLI~GlCKaGrVDeAlsLF~EM~srG~~Pd 136 (566)
.-.|+++ .-|+-+-...++|+|++++++..+.....+ +...-...|+.-+...+-..|-.|.++...
T Consensus 14 ~~~wl~~~~deLDv~IA~r~feeAv~lle~~~~~l~~~~~~~~~~~~~~~~~l~~ki~eR~~~L~~~L~~~l~~------ 87 (235)
T 2d2s_A 14 RLKFLDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSILS------ 87 (235)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHT------
T ss_pred hHHHHHcccHHHHHHHHHHhHHHHHHHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHh------
Confidence 3455654 337778889999999999988752111111 112234456666667777777777777743
Q ss_pred CCccccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHh---------CCCCCCCccccccee
Q 047498 137 SENGTLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISR---------VGVSPGEEVPFGKVV 196 (566)
Q Consensus 137 vvTYaLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~---------rGcsPdDvVTYntLI 196 (566)
.++...-...|..|+|-|+-++|.++|=+... -|+. ||.+.|..=+
T Consensus 88 -------------~~~~~~~r~~v~~L~rLg~~~~A~~lfL~~rs~~i~~~~r~l~~~-gd~~~Yi~~L 142 (235)
T 2d2s_A 88 -------------SNEIVHLKSGTENMIKLGLPEQALDLFLQNRSNFIQDLILQIGSV-DNPTNYLTQL 142 (235)
T ss_dssp -------------CSSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCC--C-CSHHHHHHHH
T ss_pred -------------cCCHHHHHHHHHHHHHCCChhHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHH
Confidence 25566677788999999999999999954432 3333 4666665544
No 263
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=20.73 E-value=4.3e+02 Score=23.71 Aligned_cols=70 Identities=11% Similarity=-0.069 Sum_probs=42.0
Q ss_pred HHHHHHHHhcCChhHHHHHHHHHH--hcCCCCCCCcc--ccccccccCCCChHhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 047498 106 CLIINAAIDRGNTDLALSIFYAMR--SSFDQGLSENG--TLVDRWKWSRPDVSVYTSLVQSLAASLKVSDALRLIDDISR 181 (566)
Q Consensus 106 NsLI~GlCKaGrVDeAlsLF~EM~--srG~~PdvvTY--aLi~~~rw~~PDVVTYNTLIdGLCKsGRVdEAlkLLeEM~~ 181 (566)
|+|=+.+-..|. ++++.+.+-|. .+|. | ++..+-..|-||++.+-.|-.+ |.|.-+++..-+.+|-.
T Consensus 26 ~tIAdwL~~~~~-~E~v~lIR~sSLmNrG~------Yq~Al~l~~~~c~pdlepw~ALce~--rlGl~s~le~rL~~la~ 96 (115)
T 2uwj_G 26 LCIAEWLERLGQ-DEAARLIRISSLANQGR------YQEALAFAHGNPWPALEPWFALCEW--HLGLGAALDRRLAGLGG 96 (115)
T ss_dssp HHHHHHHHHTTC-HHHHHHHHHHHHHHTTC------HHHHHGGGTTCCCGGGHHHHHHHHH--HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCc-HHHHHHHHHHHHHcchh------HHHHHHhcCCCCCchHHHHHHHHHH--hcccHHHHHHHHHHHHh
Confidence 444444444555 55554444443 2232 3 2222223346999998877554 88999999988888888
Q ss_pred CCC
Q 047498 182 VGV 184 (566)
Q Consensus 182 rGc 184 (566)
+|-
T Consensus 97 sg~ 99 (115)
T 2uwj_G 97 SSD 99 (115)
T ss_dssp CSS
T ss_pred CCC
Confidence 774
No 264
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=20.35 E-value=2.3e+02 Score=23.72 Aligned_cols=50 Identities=16% Similarity=0.175 Sum_probs=33.7
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHHHHH-HHHHHHHHHHHHhhhhhhhhhccc
Q 047498 417 DTIAIRQQLLSQYDLLQSRIKDLKEA-AEKEVWMLARMCQLENKIYAVGEP 466 (566)
Q Consensus 417 ~~~a~~qqll~qy~~l~~r~~~l~~~-~~~~v~~lar~~ql~nk~~avg~~ 466 (566)
|.+.--.+|=+.-|.||.|+..|+.+ .+-...+-.|+-+||+++.-++.+
T Consensus 4 dlEEKv~~LE~sld~LQTrfARLLaEy~ssQ~KLKqRit~LE~~~~~~~~~ 54 (74)
T 3swf_A 4 GLEEKVTRMESSVDLLQTRFARILAEYESMQQKLKQRLTKVEKFLKPLIDT 54 (74)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 44445566777777888887776654 334566677888888887765543
No 265
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=20.07 E-value=46 Score=24.23 Aligned_cols=12 Identities=42% Similarity=0.360 Sum_probs=8.3
Q ss_pred HHHHhhhhhhhh
Q 047498 451 ARMCQLENKIYA 462 (566)
Q Consensus 451 ar~~ql~nk~~a 462 (566)
.||-|||.|.+.
T Consensus 1 ~RM~QLEdKVEe 12 (34)
T 1uo4_A 1 XRMKQIEDKGEE 12 (34)
T ss_dssp --CHHHHHHHHH
T ss_pred CchhHHHHHHHH
Confidence 389999998764
Done!