BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047499
(152 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q07806|PBPA_PSEAE Penicillin-binding protein 1A OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=mrcA
PE=3 SV=2
Length = 822
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 87/128 (67%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T Q+ KN FL NER+ SRKI E++LAL +ER ++K EIL YV+KIY G+ YGIE+A+
Sbjct: 122 TMQVAKNYFLTNERSFSRKINEILLALQIERQLTKDEILELYVNKIYLGNRAYGIEAAAQ 181
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAGFIDIETAL 124
Y+GK LS+AE AM+AG+ AP +PL + +R + +L+RM++ GFID +
Sbjct: 182 VYYGKPIKDLSLAEMAMIAGLPKAPSRYNPLVNPTRSTERRNWILERMLKLGFIDQQRYQ 241
Query: 125 WVLKQPLD 132
+++P++
Sbjct: 242 AAVEEPIN 249
>sp|Q07259|TRG_CUPNH Putative transglycosylase H16_A0665 OS=Cupriavidus necator (strain
ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=H16_A0665
PE=3 SV=2
Length = 231
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 80/130 (61%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T Q+ +N +L ++T +RK+ E++L+ +E+A++K EIL Y++KIY G G YG A+
Sbjct: 102 TMQVARNFYLSRDKTYTRKLYEVLLSYRIEKALTKDEILELYMNKIYLGQGAYGFADAAR 161
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAGFIDIETAL 124
YFGK L++AE AMLAG+ AP +P+ + R + Q +L+RM+E G I
Sbjct: 162 TYFGKRLDQLTLAECAMLAGLPKAPSANNPVANPRRARQRQVYILQRMLELGRISRGEYD 221
Query: 125 WVLKQPLDLR 134
L +PL LR
Sbjct: 222 GALLEPLRLR 231
>sp|P70997|PBPG_BACSU Penicillin-binding protein 2D OS=Bacillus subtilis (strain 168)
GN=pbpG PE=2 SV=3
Length = 691
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 82/139 (58%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T Q +N +L++++T RK E + LE+ SK EIL Y++ IY+GHG YGIE+AS
Sbjct: 130 TQQYARNLYLEHDKTWKRKWNEAFYTIRLEQNYSKDEILEGYLNTIYYGHGAYGIEAASR 189
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAGFIDIETAL 124
YFGKH L+ AEAA+LAG+ P SP + ++ K Q +++ M + I + A
Sbjct: 190 LYFGKHAKNLTDAEAALLAGIPKGPSGYSPYVNETKAKERQKTIVRMMEKQQMISQKKAD 249
Query: 125 WVLKQPLDLRDDGKKYADR 143
++K+PL + K+ + R
Sbjct: 250 ELIKEPLSYQPLNKQVSKR 268
>sp|O87626|PBPA_NEIFL Penicillin-binding protein 1A OS=Neisseria flavescens GN=mrcA PE=3
SV=1
Length = 798
Score = 97.1 bits (240), Expect = 4e-20, Method: Composition-based stats.
Identities = 52/127 (40%), Positives = 79/127 (62%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T Q+ KN +L +ER+ +RK E +LA +E+++SK +IL Y ++IY G YG SA+
Sbjct: 124 TQQVAKNFYLSSERSFTRKFNEALLAYKIEQSLSKDKILELYFNQIYLGQRAYGFASAAQ 183
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAGFIDIETAL 124
YF K+ + L++AEAAMLAG+ AP +P+ + R K QA +L M+E G I ++
Sbjct: 184 TYFNKNVNDLTLAEAAMLAGLPKAPSAYNPIVNPERAKLRQAYILNNMLEEGMITLQQRD 243
Query: 125 WVLKQPL 131
LK+ L
Sbjct: 244 QALKEEL 250
>sp|P40750|PBPD_BACSU Penicillin-binding protein 4 OS=Bacillus subtilis (strain 168)
GN=pbpD PE=1 SV=2
Length = 624
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T QL +N +L +ER+ SRK+ E+ + LE+ +K EIL +Y++ IY+ +G+YG+ SA+
Sbjct: 132 TQQLSRNLYLSHERSFSRKLTELAYSYQLEKKYTKNEILEAYLNTIYFNNGVYGVGSAAQ 191
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAGFIDIETAL 124
FYF K L++ E A + + P L PLK K+ Q R+LK + +AG I +
Sbjct: 192 FYFSKPLKSLTVGEMAFICAIPNNPTLYDPLKHFDYTKSRQERLLKGLKDAGVITDKELK 251
Query: 125 WVLKQ--PLDLRDDGKKYADRLLYL 147
+KQ LD+ KY D + Y+
Sbjct: 252 KAVKQKIKLDVEKREDKYPDYVSYV 276
>sp|P31776|PBPA_HAEIN Penicillin-binding protein 1A OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=mrcA PE=1 SV=2
Length = 853
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 85/143 (59%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T QL +N FL +E+TI RK E VLA+ +E ++K EIL Y++KI+ G+ YG+ +A+
Sbjct: 111 TQQLARNFFLTSEKTIIRKAREAVLAVEIENTLNKQEILELYLNKIFLGYRSYGVAAAAQ 170
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAGFIDIETAL 124
YFGK + L+++E A++AG+ AP +PL R + + VL RM++ +I E
Sbjct: 171 TYFGKSLNELTLSEMAIIAGLPKAPSTMNPLYSLKRSEERRNVVLSRMLDEKYISKEEYD 230
Query: 125 WVLKQPLDLRDDGKKYADRLLYL 147
LK+P+ G K+ R Y+
Sbjct: 231 AALKEPIVASYHGAKFEFRADYV 253
>sp|O66874|PBPA_AQUAE Penicillin-binding protein 1A OS=Aquifex aeolicus (strain VF5)
GN=mrcA PE=1 SV=1
Length = 726
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 86/142 (60%), Gaps = 1/142 (0%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T QL KN FL ERT+ RKI E +LA+ +ER K +I+ Y+++IY G G YG+E+A+
Sbjct: 119 TQQLAKNLFLTRERTLERKIKEALLAIKIERTFDKKKIMELYLNQIYLGSGAYGVEAAAQ 178
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAGFIDIETAL 124
YFGKH LS+ EAA+LA + AP +P R + VLKRM+E G+I E
Sbjct: 179 VYFGKHVWELSLDEAALLAALPKAPAKYNPFYHPERALQRRNLVLKRMLEEGYITPEQYE 238
Query: 125 WVLKQPLDLRDDGK-KYADRLL 145
+ +PL ++ + K K++D L
Sbjct: 239 EAVNKPLTVKKENKYKFSDYFL 260
>sp|P38050|PBPF_BACSU Penicillin-binding protein 1F OS=Bacillus subtilis (strain 168)
GN=pbpF PE=2 SV=2
Length = 714
Score = 92.8 bits (229), Expect = 7e-19, Method: Composition-based stats.
Identities = 46/120 (38%), Positives = 77/120 (64%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T QL KN FL +++T RK E+++A+ LER SK ++L Y++++Y+GHG+YGI++AS
Sbjct: 123 TQQLAKNIFLTHDKTFLRKTKEVIIAINLERDYSKDKLLEMYLNQLYFGHGVYGIQAASH 182
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAGFIDIETAL 124
+YF K L+++E A+LA + AP SP+ + K + +L M + G+I + A+
Sbjct: 183 YYFNKEVKDLTVSEGAVLAAIPKAPSTYSPILHPDKNKERRDTILGMMNDQGYISAKEAV 242
>sp|P02918|PBPA_ECOLI Penicillin-binding protein 1A OS=Escherichia coli (strain K12)
GN=mrcA PE=1 SV=1
Length = 850
Score = 91.7 bits (226), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/114 (42%), Positives = 72/114 (63%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T QL +N FL ERT+ RKI E+ LA+ +E+ ++K EIL Y++KIY G+ YG+ +A+
Sbjct: 122 TQQLARNFFLSPERTLMRKIKEVFLAIRIEQLLTKDEILELYLNKIYLGYRAYGVGAAAQ 181
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAGFI 118
YFGK L++ E A++AG+ AP +PL R + VL RM++ G+I
Sbjct: 182 VYFGKTVDQLTLNEMAVIAGLPKAPSTFNPLYSMDRAVARRNVVLSRMLDEGYI 235
>sp|O05131|PBPA_NEIGO Penicillin-binding protein 1A OS=Neisseria gonorrhoeae GN=mrcA PE=1
SV=3
Length = 798
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 76/127 (59%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T Q+ KN +L +E+T +RK E++LA +E+++SK +IL Y ++IY G YG SA+
Sbjct: 124 TQQVAKNFYLSSEKTFTRKFNEVLLAYKIEQSLSKDKILELYFNQIYLGQRAYGFASAAQ 183
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAGFIDIETAL 124
YF K+ L++AEAAMLAG+ AP +P+ + R K Q +L M+E I ++
Sbjct: 184 IYFNKNVRDLTLAEAAMLAGLPKAPSAYNPIVNPERAKLRQKYILNNMLEEKMITVQQRD 243
Query: 125 WVLKQPL 131
L + L
Sbjct: 244 QALNEEL 250
>sp|Q5FAC7|PBPA_NEIG1 Penicillin-binding protein 1A OS=Neisseria gonorrhoeae (strain ATCC
700825 / FA 1090) GN=mrcA PE=3 SV=3
Length = 798
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 76/127 (59%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T Q+ KN +L +E+T +RK E++LA +E+++SK +IL Y ++IY G YG SA+
Sbjct: 124 TQQVAKNFYLSSEKTFTRKFNEVLLAYKIEQSLSKDKILELYFNQIYLGQRAYGFASAAQ 183
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAGFIDIETAL 124
YF K+ L++AEAAMLAG+ AP +P+ + R K Q +L M+E I ++
Sbjct: 184 IYFNKNVRDLTLAEAAMLAGLPKAPSAYNPIVNPERAKLRQKYILNNMLEEKMITVQQRD 243
Query: 125 WVLKQPL 131
L + L
Sbjct: 244 QALNEEL 250
>sp|Q68VU2|PBPA_RICTY Penicillin-binding protein 1A OS=Rickettsia typhi (strain ATCC
VR-144 / Wilmington) GN=mrcA PE=3 SV=1
Length = 785
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 81/135 (60%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T Q+VKN L NE ++ RKI E++++ + R +K +IL Y+++ ++G G YG+ +A+
Sbjct: 126 TQQVVKNFLLTNEVSLERKIKEVIISYMISRVFTKHQILELYLNQTFFGRGAYGVAAAAQ 185
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAGFIDIETAL 124
YF K L++AE+A +A + AP +P K+ SR K + V++RM E G+I +T
Sbjct: 186 NYFNKSIEELTIAESAFIAALPKAPSELNPDKNYSRVKARRDYVIERMFEDGYITRDTMK 245
Query: 125 WVLKQPLDLRDDGKK 139
+ P+ LR K+
Sbjct: 246 EAIGSPIVLRKRAKE 260
>sp|P0A0Z6|PBPA_NEIMB Penicillin-binding protein 1A OS=Neisseria meningitidis serogroup B
(strain MC58) GN=mrcA PE=3 SV=1
Length = 798
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 76/127 (59%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T Q+ KN +L +E+T +RK E++LA +E+++SK +IL Y ++IY G YG SA+
Sbjct: 124 TQQVAKNFYLSSEKTFTRKFNEVLLAYKIEQSLSKDKILELYFNQIYLGQRAYGFASAAQ 183
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAGFIDIETAL 124
YF K+ L++AEAAMLAG+ AP +P+ + R K Q +L M+E I ++
Sbjct: 184 IYFNKNVRDLTLAEAAMLAGLPKAPSAYNPIVNPERAKLRQKYILNNMLEEKMITVQQRD 243
Query: 125 WVLKQPL 131
L + L
Sbjct: 244 QALNEEL 250
>sp|P0A0Z5|PBPA_NEIMA Penicillin-binding protein 1A OS=Neisseria meningitidis serogroup A
/ serotype 4A (strain Z2491) GN=mrcA PE=3 SV=1
Length = 798
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 76/127 (59%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T Q+ KN +L +E+T +RK E++LA +E+++SK +IL Y ++IY G YG SA+
Sbjct: 124 TQQVAKNFYLSSEKTFTRKFNEVLLAYKIEQSLSKDKILELYFNQIYLGQRAYGFASAAQ 183
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAGFIDIETAL 124
YF K+ L++AEAAMLAG+ AP +P+ + R K Q +L M+E I ++
Sbjct: 184 IYFNKNVRDLTLAEAAMLAGLPKAPSAYNPIVNPERAKLRQKYILNNMLEEKMITVQQRD 243
Query: 125 WVLKQPL 131
L + L
Sbjct: 244 QALNEEL 250
>sp|Q9ZCE9|PBPA_RICPR Penicillin-binding protein 1A OS=Rickettsia prowazekii (strain
Madrid E) GN=mrcA PE=3 SV=1
Length = 787
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 81/135 (60%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T Q+VKN L NE ++ RKI E++++ + R +K +IL Y+++ ++G G YG+ +A+
Sbjct: 126 TQQVVKNFLLTNEVSLERKIKEVIISYMISRIFTKHQILELYLNQTFFGRGAYGVAAAAQ 185
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAGFIDIETAL 124
YF K L++AE+A +A + AP +P K+ SR K + V++RM E G+I +T
Sbjct: 186 NYFNKSVEELTIAESAFIAALPKAPSELNPDKNYSRVKARRDYVIERMFEDGYITRDTMK 245
Query: 125 WVLKQPLDLRDDGKK 139
+ P+ LR K+
Sbjct: 246 EAIGSPIVLRKRAKE 260
>sp|Q1RKC5|PBPA_RICBR Penicillin-binding protein 1A OS=Rickettsia bellii (strain
RML369-C) GN=mrcA PE=3 SV=1
Length = 791
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 77/130 (59%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T Q+VKN L NE + RKI E +L+ + R +K +IL Y+++ ++G G YG+ +A+
Sbjct: 126 TQQVVKNFLLTNEVSFQRKIKEAILSYMISRVFTKDQILELYLNQTFFGRGAYGVATAAQ 185
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAGFIDIETAL 124
YF K L++AE+A +A + AP +P K+ +R K + V+ RM+E G+I + A
Sbjct: 186 NYFNKSVEELTIAESAFIAALPKAPSELNPEKNYARVKARRDYVIMRMLEDGYITSDAAK 245
Query: 125 WVLKQPLDLR 134
+ P+ LR
Sbjct: 246 EAVDSPITLR 255
>sp|Q4UK08|PBPA_RICFE Penicillin-binding protein 1A OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=mrcA PE=3 SV=1
Length = 790
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 79/135 (58%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T Q+VKN L NE ++ RKI E +L+ + R +K +IL Y+++ ++G G YG+ +A+
Sbjct: 126 TQQVVKNFLLTNEVSLERKIKEAILSYMISRVFTKEQILELYLNQTFFGRGAYGVAAAAQ 185
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAGFIDIETAL 124
YF K L++AE+A +A + AP +P ++ +R K + V+ RM E G+I + A
Sbjct: 186 NYFNKSVEELTIAESAFIAALPKAPSELNPERNYARVKARRDYVIARMFEDGYITKDAAK 245
Query: 125 WVLKQPLDLRDDGKK 139
+ P+ LR K+
Sbjct: 246 EAMDSPIVLRKRAKE 260
>sp|O87579|PBPA_NEILA Penicillin-binding protein 1A OS=Neisseria lactamica GN=mrcA PE=3
SV=1
Length = 798
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 74/127 (58%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T Q+ KN +L +E+T +RK E +LA +E+++SK +IL Y ++IY G YG SA+
Sbjct: 124 TQQVAKNFYLSSEKTFTRKFNEALLAYKIEQSLSKDKILELYFNQIYLGQRAYGFASAAQ 183
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAGFIDIETAL 124
YF K L++AEAAMLAG+ AP +P+ + R K Q +L M+E I ++
Sbjct: 184 IYFNKDVRDLTLAEAAMLAGLPKAPSAYNPIVNPERAKLRQKYILNNMLEEKMITLQQRD 243
Query: 125 WVLKQPL 131
L + L
Sbjct: 244 QALNEEL 250
>sp|Q9KNU5|PBPA_VIBCH Penicillin-binding protein 1A OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=mrcA PE=3
SV=2
Length = 825
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 72/114 (63%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T QL +N FL NE+ + RK+ E+ +A+ +E+ +SK EIL Y++KIY G+ YG+ +A+
Sbjct: 122 TQQLARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRSYGVGAAAQ 181
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAGFI 118
YFGK L++ E A++AG+ AP +P+ R + VL+RM++ +I
Sbjct: 182 AYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYI 235
>sp|Q92G78|PBPA_RICCN Penicillin-binding protein 1A OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=mrcA PE=3 SV=1
Length = 790
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 78/135 (57%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T Q+VKN L NE ++ RKI E +L+ + R +K +IL Y+++ ++G G YG+ A+
Sbjct: 126 TQQVVKNFLLTNEVSLERKIKEAILSYMISRVFTKDQILELYLNQTFFGRGAYGVAVAAQ 185
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAGFIDIETAL 124
YF K L++AE+A +A + AP +P ++ +R K + V+ RM E G+I + A
Sbjct: 186 NYFNKSVEELTIAESAFIAALPKAPSELNPERNYARVKARRDYVITRMFEDGYITRDAAK 245
Query: 125 WVLKQPLDLRDDGKK 139
+ P+ LR K+
Sbjct: 246 EAMDSPIVLRKRAKE 260
>sp|O86088|PBPA_NEICI Penicillin-binding protein 1A OS=Neisseria cinerea GN=mrcA PE=3
SV=1
Length = 798
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 73/127 (57%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T Q+ KN +L +E+T +RK E +LA +E+++SK +IL Y ++IY G YG SA+
Sbjct: 124 TQQVAKNFYLSSEKTFTRKFNEALLAYKIEQSLSKDKILELYFNQIYLGQRAYGFASAAQ 183
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAGFIDIETAL 124
YF K L++AE AMLAG+ AP +P+ + R K Q +L M+E I ++
Sbjct: 184 IYFNKDVRELTLAEVAMLAGLPKAPSAYNPIVNPERAKLRQKYILNNMLEEKMITLQQRD 243
Query: 125 WVLKQPL 131
L + L
Sbjct: 244 QALNEEL 250
>sp|P45345|PBPB_HAEIN Penicillin-binding protein 1B OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=mrcB PE=3 SV=1
Length = 781
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHG----IYGIE 60
T QLVKN FL ERTI+RK E +++L L+ K IL +Y+++IY G I+G E
Sbjct: 224 TQQLVKNLFLSRERTITRKANEALMSLVLDWRYDKNRILETYLNEIYLGQNGDTQIHGFE 283
Query: 61 SASIFYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAGFIDI 120
AS FYFG+ +S+ + A+L GM+ P L +P ++ + VL+ M+E I
Sbjct: 284 LASQFYFGRSIREISLDQIALLVGMVKGPSLYNPWRNPQNALERRNIVLRLMLEHKMIGD 343
Query: 121 ETALWVLKQPLDLRDDGK 138
E + ++PL ++ G+
Sbjct: 344 ELYQLLSQRPLGVQKKGQ 361
>sp|Q49YR9|MGT_STAS1 Monofunctional glycosyltransferase OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=mgt PE=3 SV=1
Length = 270
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 76/122 (62%), Gaps = 9/122 (7%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T Q+VKN + NE++I+RKI E+ +A +E+ K EILS Y++ IY+G Y IESA+
Sbjct: 136 TQQVVKNYYYDNEQSITRKIKELFVAHRVEKEYDKNEILSFYMNNIYYGSDQYTIESAAN 195
Query: 65 FYFG-----KHPSL--LSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARV-LKRMVEAG 116
YFG +P+L +S+ ++A+LA I AP + + + D S T + + L++M + G
Sbjct: 196 HYFGVTTDKNNPNLPQISVLQSAILASKINAPSVYN-INDMSDNFTNRVKTDLEKMKQQG 254
Query: 117 FI 118
+I
Sbjct: 255 YI 256
>sp|A7GHV1|PBPA_CLOBL Penicillin-binding protein 1A OS=Clostridium botulinum (strain
Langeland / NCTC 10281 / Type F) GN=pbpA PE=3 SV=1
Length = 827
Score = 80.5 bits (197), Expect = 4e-15, Method: Composition-based stats.
Identities = 48/123 (39%), Positives = 71/123 (57%), Gaps = 13/123 (10%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T QL+KNT L +E +I RK+ EM L++ LE+ +SK EIL +Y++ I+ G G+E+AS
Sbjct: 136 TQQLIKNTVLSSEVSIKRKVQEMYLSIQLEKELSKDEILGAYMNSIFLGGNALGVEAASK 195
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCS---------RGKTFQARVLKRMVEA 115
YF K LS+ E A +AG+ +P + P S R KT VL +M++
Sbjct: 196 QYFNKSVKDLSLIECAFIAGVPQSPSVYYPYSSASKKNPSIYLNRTKT----VLYKMLDN 251
Query: 116 GFI 118
G+I
Sbjct: 252 GYI 254
>sp|A5I6G4|PBPA_CLOBH Penicillin-binding protein 1A OS=Clostridium botulinum (strain Hall
/ ATCC 3502 / NCTC 13319 / Type A) GN=pbpA PE=3 SV=1
Length = 830
Score = 80.5 bits (197), Expect = 4e-15, Method: Composition-based stats.
Identities = 48/123 (39%), Positives = 71/123 (57%), Gaps = 13/123 (10%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T QL+KNT L +E +I RK+ EM L++ LE+ +SK EIL +Y++ I+ G G+E+AS
Sbjct: 136 TQQLIKNTVLSSEVSIKRKVQEMYLSIQLEKELSKDEILGAYMNSIFLGGNALGVEAASK 195
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCS---------RGKTFQARVLKRMVEA 115
YF K LS+ E A +AG+ +P + P S R KT VL +M++
Sbjct: 196 QYFNKSVKDLSLIECAFIAGVPQSPSVYYPYSSASKKNPSIYLNRTKT----VLYKMLDN 251
Query: 116 GFI 118
G+I
Sbjct: 252 GYI 254
>sp|A7FY32|PBPA_CLOB1 Penicillin-binding protein 1A OS=Clostridium botulinum (strain ATCC
19397 / Type A) GN=pbpA PE=3 SV=1
Length = 830
Score = 80.5 bits (197), Expect = 4e-15, Method: Composition-based stats.
Identities = 48/123 (39%), Positives = 71/123 (57%), Gaps = 13/123 (10%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T QL+KNT L +E +I RK+ EM L++ LE+ +SK EIL +Y++ I+ G G+E+AS
Sbjct: 136 TQQLIKNTVLSSEVSIKRKVQEMYLSIQLEKELSKDEILGAYMNSIFLGGNALGVEAASK 195
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCS---------RGKTFQARVLKRMVEA 115
YF K LS+ E A +AG+ +P + P S R KT VL +M++
Sbjct: 196 QYFNKSVKDLSLIECAFIAGVPQSPSVYYPYSSASKKNPSIYLNRTKT----VLYKMLDN 251
Query: 116 GFI 118
G+I
Sbjct: 252 GYI 254
>sp|Q04707|PBPA_STRPN Penicillin-binding protein 1A OS=Streptococcus pneumoniae serotype
4 (strain ATCC BAA-334 / TIGR4) GN=ponA PE=1 SV=2
Length = 719
Score = 79.3 bits (194), Expect = 8e-15, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 74/130 (56%), Gaps = 3/130 (2%)
Query: 5 TWQLVKNTFLK---NERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIES 61
T QL+K T+ +++TISRK E LA+ LE+ +K EIL+ Y++K+Y +G YG+++
Sbjct: 126 TQQLIKLTYFSTSTSDQTISRKAQEAWLAIQLEQKATKQEILTYYINKVYMSNGNYGMQT 185
Query: 62 ASIFYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAGFIDIE 121
A+ Y+GK + LS+ + A+LAGM AP+ P + + VL M G+I E
Sbjct: 186 AAQNYYGKDLNNLSLPQLALLAGMPQAPNQYDPYSHPEAAQDRRNLVLSEMKNQGYISAE 245
Query: 122 TALWVLKQPL 131
+ P+
Sbjct: 246 QYEKAVNTPI 255
>sp|Q8DR59|PBPA_STRR6 Penicillin-binding protein 1A OS=Streptococcus pneumoniae (strain
ATCC BAA-255 / R6) GN=pbpA PE=1 SV=1
Length = 719
Score = 79.3 bits (194), Expect = 8e-15, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 74/130 (56%), Gaps = 3/130 (2%)
Query: 5 TWQLVKNTFLK---NERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIES 61
T QL+K T+ +++TISRK E LA+ LE+ +K EIL+ Y++K+Y +G YG+++
Sbjct: 126 TQQLIKLTYFSTSTSDQTISRKAQEAWLAIQLEQKATKQEILTYYINKVYMSNGNYGMQT 185
Query: 62 ASIFYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAGFIDIE 121
A+ Y+GK + LS+ + A+LAGM AP+ P + + VL M G+I E
Sbjct: 186 AAQNYYGKDLNNLSLPQLALLAGMPQAPNQYDPYSHPEAAQDRRNLVLSEMKNQGYISAE 245
Query: 122 TALWVLKQPL 131
+ P+
Sbjct: 246 QYEKAVNTPI 255
>sp|Q0VLR6|MTGA_ALCBS Monofunctional biosynthetic peptidoglycan transglycosylase
OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 /
DSM 11573) GN=mtgA PE=3 SV=1
Length = 245
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 54/87 (62%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T QL KN +L ERT +RK E V+AL LE +SK IL Y++ WGH IYG E+A+
Sbjct: 110 TQQLAKNLYLSGERTYTRKAQEAVIALMLEIGLSKRRILELYLNVAQWGHQIYGAEAAAQ 169
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDL 91
YF + LS +AA LA M+P P+L
Sbjct: 170 HYFQISAAQLSPLQAAQLAAMLPRPNL 196
>sp|P39793|PBPA_BACSU Penicillin-binding protein 1A/1B OS=Bacillus subtilis (strain 168)
GN=ponA PE=1 SV=1
Length = 914
Score = 79.0 bits (193), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/115 (39%), Positives = 72/115 (62%), Gaps = 1/115 (0%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T Q+VKN+ L +++T+ RK+ E+ L++ LER SK EIL Y+++IY+ YGI A+
Sbjct: 151 TQQVVKNSLLSHQKTLKRKVQEVWLSIQLERNYSKDEILEMYLNRIYFSPRAYGIGKAAE 210
Query: 65 FYFG-KHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAGFI 118
+FG S L++ +AA LAGM +P +P+K+ + + + VL M + GFI
Sbjct: 211 EFFGVTDLSKLTVEQAATLAGMPQSPTAYNPVKNPDKAEKRRNIVLSLMKKQGFI 265
>sp|Q891X1|PBPA_CLOTE Penicillin-binding protein 1A OS=Clostridium tetani (strain
Massachusetts / E88) GN=pbpA PE=3 SV=1
Length = 790
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 68/121 (56%), Gaps = 4/121 (3%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T QLV+NT L E I RK+ EM L++ LE+ +SK +IL +Y++ I G YGIE+AS
Sbjct: 140 TQQLVRNTLLSQEVRIKRKVQEMYLSIQLEKKVSKEQILEAYMNTIPLGGSAYGIEAASK 199
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAP----DLRSPLKDCSRGKTFQARVLKRMVEAGFIDI 120
YFGK L++ E+A +AG+ +P + K+ R VL +M E +I
Sbjct: 200 QYFGKSVKDLNLIESAFIAGLPQSPSTFYNAAMSQKNTERYINRTKLVLGKMREHNYISK 259
Query: 121 E 121
E
Sbjct: 260 E 260
>sp|Q8XJ01|PBPA_CLOPE Penicillin-binding protein 1A OS=Clostridium perfringens (strain 13
/ Type A) GN=pbpA PE=3 SV=1
Length = 679
Score = 76.6 bits (187), Expect = 5e-14, Method: Composition-based stats.
Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T QL+KN L NE + RKI EM LAL LE+ +SK EIL++Y++ I G YG+ +A+
Sbjct: 151 TQQLIKNAVLTNEVSYERKIKEMYLALELEKHLSKDEILTTYLNTIPMGGYQYGVSAAAQ 210
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDC-----SRGKTFQARVLKRMVEAGFID 119
+F K+ S L++ E A L G+ AP L + SR VL +M E G+I
Sbjct: 211 RFFSKNVSDLNLVECAYLGGLTQAPTSYDGLSEANKENPSRYLNRTKSVLFKMHELGYIS 270
Query: 120 IE 121
E
Sbjct: 271 SE 272
>sp|Q0TNZ8|PBPA_CLOP1 Penicillin-binding protein 1A OS=Clostridium perfringens (strain
ATCC 13124 / NCTC 8237 / Type A) GN=pbpA PE=3 SV=1
Length = 830
Score = 76.6 bits (187), Expect = 5e-14, Method: Composition-based stats.
Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T QL+KN L NE + RKI EM LAL LE+ +SK EIL++Y++ I G YG+ +A+
Sbjct: 151 TQQLIKNAVLTNEVSYERKIKEMYLALELEKHLSKDEILTTYLNTIPMGGYQYGVSAAAQ 210
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDC-----SRGKTFQARVLKRMVEAGFID 119
+F K+ S L++ E A L G+ AP L + SR VL +M E G+I
Sbjct: 211 RFFSKNVSDLNLVECAYLGGLTQAPTSYDGLSEANKENPSRYLNRTKSVLFKMHELGYIS 270
Query: 120 IE 121
E
Sbjct: 271 SE 272
>sp|Q00573|PBPA_STROR Penicillin-binding protein 1A (Fragment) OS=Streptococcus oralis
GN=ponA PE=3 SV=1
Length = 637
Score = 76.6 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 45/130 (34%), Positives = 73/130 (56%), Gaps = 3/130 (2%)
Query: 5 TWQLVKNTFLK---NERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIES 61
T QL+K T+ +++T+SRK E LA+ LE+ +K EIL+ Y++K+Y +G YG+++
Sbjct: 127 TQQLIKLTYFSTSTSDQTLSRKAQEAWLAVQLEQKATKQEILTYYINKVYMSNGNYGMQT 186
Query: 62 ASIFYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAGFIDIE 121
A+ Y+GK LS+ + A+LAGM AP+ P + + VL M G+I E
Sbjct: 187 AAQSYYGKDLKDLSIPQLALLAGMPQAPNQYDPYSHPEAAQERRNLVLSEMKGQGYITAE 246
Query: 122 TALWVLKQPL 131
+ P+
Sbjct: 247 QYEKAINTPI 256
>sp|Q1GYH8|MTGA_METFK Monofunctional biosynthetic peptidoglycan transglycosylase
OS=Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875) GN=mtgA PE=3 SV=1
Length = 229
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Query: 7 QLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASIFY 66
QL KN FL +RT RK+ E V+ LER +SK I Y++ I WG+G++G E+A+ Y
Sbjct: 118 QLAKNLFLSTKRTPWRKLEEAVITWMLERMMSKRRIFEIYLNVIEWGNGVFGAEAAARHY 177
Query: 67 FGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLK 110
+ S L++A+AA LA MIP P ++ RG +AR+++
Sbjct: 178 YRTSASSLNVAQAARLAAMIPNPRYYDKHREA-RGLIRKARIIE 220
>sp|Q0SRL7|PBPA_CLOPS Penicillin-binding protein 1A OS=Clostridium perfringens (strain
SM101 / Type A) GN=pbpA PE=3 SV=1
Length = 820
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T QL+KN L NE + RKI EM LAL LE+ +SK EIL++Y++ I G YG+ +A+
Sbjct: 151 TQQLIKNAVLTNEVSYERKIKEMYLALELEKHLSKDEILTTYLNTIPMGGYQYGVSAAAQ 210
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDC-----SRGKTFQARVLKRMVEAGFID 119
+F K+ S L++ E A L G+ AP L + SR VL +M E G+I
Sbjct: 211 RFFSKNVSDLNLIECAYLGGLTQAPTSYDGLSEINKENPSRYLNRTKSVLFKMHELGYIS 270
Query: 120 IE 121
E
Sbjct: 271 SE 272
>sp|Q3SFZ8|MTGA_THIDA Monofunctional biosynthetic peptidoglycan transglycosylase
OS=Thiobacillus denitrificans (strain ATCC 25259)
GN=mtgA PE=3 SV=1
Length = 232
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 53/85 (62%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T QL KN FL ER+ RK E+V+ L +E SK IL Y++ I WG+GIYG E+AS
Sbjct: 118 TQQLAKNLFLSGERSFLRKGQEVVITLMIESTWSKRRILEVYLNVIEWGNGIYGAEAASR 177
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAP 89
Y+ K + LS +AA +A MIP P
Sbjct: 178 RYYKKSAATLSRDQAARMAAMIPNP 202
>sp|Q8FYT4|MTGA_BRUSU Monofunctional biosynthetic peptidoglycan transglycosylase
OS=Brucella suis biovar 1 (strain 1330) GN=mtgA PE=3
SV=2
Length = 224
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 64/112 (57%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T Q+VKN FL N R+ RK +E LAL + +SK I+ Y++ WG GIYGIE+A+
Sbjct: 106 TMQMVKNLFLWNGRSYLRKGLEFPLALIADAVLSKKRIMEIYLNIAEWGPGIYGIEAAAR 165
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAG 116
YF + + L+ +AA+LA +P P LR+P K + V R + +G
Sbjct: 166 HYFKRSAAKLTARQAALLAVTLPNPALRNPAKPTRNMQRIARIVAGRAMRSG 217
>sp|Q87AW7|PBPA_XYLFT Penicillin-binding protein 1A OS=Xylella fastidiosa (strain
Temecula1 / ATCC 700964) GN=mrcA PE=3 SV=1
Length = 809
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 73/120 (60%), Gaps = 1/120 (0%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T Q+ + FL +E + RK+ E++LA +E + K EIL Y++K ++G+ YGI +A+
Sbjct: 127 TQQVARQFFLNSEYSYKRKLAEILLARKIESQLKKDEILELYLNKSFFGNRAYGIAAAAE 186
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQA-RVLKRMVEAGFIDIETA 123
FY+GK + L++ E A LAG+ P +P+ + +R + + VL+RMV+ FI + A
Sbjct: 187 FYYGKKLNELNLDEMASLAGIPKFPSSGNPITNPARARERRDLYVLQRMVDLNFITQDQA 246
>sp|Q8YJ15|MTGA_BRUME Monofunctional biosynthetic peptidoglycan transglycosylase
OS=Brucella melitensis biotype 1 (strain 16M / ATCC
23456 / NCTC 10094) GN=mtgA PE=3 SV=2
Length = 224
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 64/112 (57%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T Q+VKN FL N R+ RK +E LAL + +S+ I+ Y++ WG GIYGIE+A+
Sbjct: 106 TMQMVKNLFLWNGRSYLRKGLEFPLALIADAVLSRKRIMEIYLNIAEWGPGIYGIEAAAR 165
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAG 116
YF + + L+ +AA+LA +P P LR+P K + V R + +G
Sbjct: 166 HYFKRSAAKLTARQAALLAVTLPNPALRNPAKPTRNMQRIARIVAGRAMRSG 217
>sp|Q82U73|MTGA_NITEU Monofunctional biosynthetic peptidoglycan transglycosylase
OS=Nitrosomonas europaea (strain ATCC 19718 / NBRC
14298) GN=mtgA PE=3 SV=1
Length = 244
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 54/83 (65%)
Query: 7 QLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASIFY 66
QL KN FL E+T+ RK E ++ L LE ++K IL Y++ I WG GI+GIE+A+ Y
Sbjct: 133 QLAKNLFLSTEKTVWRKSRETLITLMLEEFLTKRRILEIYLNIIEWGDGIFGIEAAARHY 192
Query: 67 FGKHPSLLSMAEAAMLAGMIPAP 89
FG + L+ A+AA LA +IP P
Sbjct: 193 FGISAASLTPAQAAWLASIIPNP 215
>sp|Q9PGD4|PBPA_XYLFA Penicillin-binding protein 1A OS=Xylella fastidiosa (strain 9a5c)
GN=mrcA PE=3 SV=2
Length = 809
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 73/120 (60%), Gaps = 1/120 (0%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T Q+ + FL +E + RK+ E++LA +E + K EIL Y++K ++G+ YGI +A+
Sbjct: 127 TQQVARQFFLNSEYSYKRKLAEILLARKIESQLKKDEILELYLNKSFFGNRAYGIAAAAE 186
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQA-RVLKRMVEAGFIDIETA 123
FY+GK + L++ E A LAG+ P +P+ + +R + + VL+RMV+ FI + A
Sbjct: 187 FYYGKKLNELNLDEMASLAGIPKFPSSGNPITNPARARERRDLYVLQRMVDLNFITQDQA 246
>sp|Q8CNQ3|MGT_STAES Monofunctional glycosyltransferase OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=mgt PE=3 SV=1
Length = 269
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 9/122 (7%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T Q+VKN + NER+ +RKI E+ +A +E+ SK +ILS Y++ IY+G Y +E A+
Sbjct: 135 TQQVVKNYYYDNERSFTRKIKELFVARKVEKQYSKNQILSFYMNNIYYGDNQYTVEGAAN 194
Query: 65 FYFG-------KHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARV-LKRMVEAG 116
YFG + S +S+ ++A+LA + AP + + D S + + L++M +
Sbjct: 195 HYFGVTVDKNNSNMSQISVLQSAILASKVNAPSVYD-VNDMSNNYINRVKTNLEKMKQQN 253
Query: 117 FI 118
FI
Sbjct: 254 FI 255
>sp|Q5HN60|MGT_STAEQ Monofunctional glycosyltransferase OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=mgt PE=3 SV=1
Length = 269
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 9/122 (7%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T Q+VKN + NER+ +RKI E+ +A +E+ SK +ILS Y++ IY+G Y +E A+
Sbjct: 135 TQQVVKNYYYDNERSFTRKIKELFVARKVEKQYSKNQILSFYMNNIYYGDNQYTVEGAAN 194
Query: 65 FYFG-------KHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARV-LKRMVEAG 116
YFG + S +S+ ++A+LA + AP + + D S + + L++M +
Sbjct: 195 HYFGVTVDKNNSNMSQISVLQSAILASKVNAPSVYD-VNDMSNNYINRVKTNLEKMKQQN 253
Query: 117 FI 118
FI
Sbjct: 254 FI 255
>sp|Q4L7I0|MGT_STAHJ Monofunctional glycosyltransferase OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=mgt PE=3 SV=1
Length = 270
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 71/121 (58%), Gaps = 7/121 (5%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T Q VKN + NER+ +RK+ E+ +A +E+ SK EILS Y++ IY+G Y IESA+
Sbjct: 135 TQQTVKNYYYDNERSFTRKLKELFVAHKVEQQYSKNEILSFYLNNIYYGSDQYTIESAAN 194
Query: 65 FYFGK--HPSLLSMAEAAMLAGMIPAPDLRSP-LKDCSR-GKTFQARV---LKRMVEAGF 117
+YFG + + SM++ +L I A + +P + D S F+ R+ L++M + +
Sbjct: 195 YYFGTTVNKNSDSMSQITVLQSAILASKVNAPSVYDISNMSDNFKNRIKTNLEKMKQQEY 254
Query: 118 I 118
I
Sbjct: 255 I 255
>sp|A6VRW7|MTGA_MARMS Monofunctional biosynthetic peptidoglycan transglycosylase
OS=Marinomonas sp. (strain MWYL1) GN=mtgA PE=3 SV=1
Length = 225
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 56/90 (62%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T Q KN FL + R+ RK +E LA+ LE K IL Y++ +G GIYG+E+AS
Sbjct: 105 TQQTAKNLFLWSGRSFIRKGLEAGLAIGLETLWGKKRILEVYLNIAEFGKGIYGVEAASQ 164
Query: 65 FYFGKHPSLLSMAEAAMLAGMIPAPDLRSP 94
YFG+ S L+M +AA LA ++P+P R+P
Sbjct: 165 HYFGRSASKLTMNQAARLAVLLPSPRTRNP 194
>sp|Q0AIQ0|MTGA_NITEC Monofunctional biosynthetic peptidoglycan transglycosylase
OS=Nitrosomonas eutropha (strain C91) GN=mtgA PE=3 SV=1
Length = 244
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 56/94 (59%)
Query: 7 QLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASIFY 66
QL KN FL +E+T+ RK+ E ++ L LE +SK IL Y++ I WG G++GIE+A+ Y
Sbjct: 133 QLAKNLFLSSEKTVWRKLQETLITLILEEFLSKRRILEIYLNVIEWGEGVFGIEAAARHY 192
Query: 67 FGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSR 100
FG S L+ ++A LA +I P + R
Sbjct: 193 FGIPASSLAPEQSAWLASIISNPRFYDTHRQSPR 226
>sp|P57296|PBPB_BUCAI Penicillin-binding protein 1B OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=mrcB PE=3 SV=1
Length = 760
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/94 (42%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHG----IYGIE 60
T QL+KN FL N R+I RKI E+ +AL L+R +K IL Y++++Y G I G
Sbjct: 210 TQQLIKNLFLTNTRSILRKINEIYMALILDRFYTKDRILELYLNEVYLGQDGDEQIRGFP 269
Query: 61 SASIFYFGKHPSLLSMAEAAMLAGMIPAPDLRSP 94
ASI+YFG+ + L++ + A+L GM+ L SP
Sbjct: 270 LASIYYFGRPINELNLEQYALLVGMVKGASLYSP 303
>sp|Q7A0I6|MGT_STAAW Monofunctional glycosyltransferase OS=Staphylococcus aureus (strain
MW2) GN=mgt PE=1 SV=1
Length = 269
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 75/125 (60%), Gaps = 13/125 (10%)
Query: 5 TWQLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASI 64
T Q+VKN F N+R+ +RK+ E+ +A +E+ +K EILS Y++ IY+G Y +E A+
Sbjct: 135 TQQVVKNYFYDNDRSFTRKVKELFVAHRVEKQYNKNEILSFYLNNIYFGDNQYTLEGAAN 194
Query: 65 FYFG----KHPSLLS---MAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARV---LKRMVE 114
YFG K+ + +S + ++A+LA + AP + + + + S + F RV L++M +
Sbjct: 195 HYFGTTVNKNSTTMSHITVLQSAILASKVNAPSVYN-INNMS--ENFTQRVSTNLEKMKQ 251
Query: 115 AGFID 119
+I+
Sbjct: 252 QNYIN 256
>sp|Q11CS6|MTGA_MESSB Monofunctional biosynthetic peptidoglycan transglycosylase
OS=Mesorhizobium sp. (strain BNC1) GN=mtgA PE=3 SV=1
Length = 243
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 61/110 (55%)
Query: 7 QLVKNTFLKNERTISRKIVEMVLALALERAISKWEILSSYVSKIYWGHGIYGIESASIFY 66
Q VKN +L R+ RK +E LA+ L+ + K I+ Y++ WG GIYG+E+A+ Y
Sbjct: 125 QTVKNLYLWPGRSFLRKAIEAPLAIYLDAVMPKHRIMEIYLNIAEWGPGIYGVEAAAQHY 184
Query: 67 FGKHPSLLSMAEAAMLAGMIPAPDLRSPLKDCSRGKTFQARVLKRMVEAG 116
FG+ LS EAA+LA +P P R+P + + + + V R AG
Sbjct: 185 FGRPSRDLSRREAALLAVTLPNPSERNPAQPSAALRRLASVVEARAQRAG 234
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,211,132
Number of Sequences: 539616
Number of extensions: 1791559
Number of successful extensions: 6698
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 6443
Number of HSP's gapped (non-prelim): 250
length of query: 152
length of database: 191,569,459
effective HSP length: 107
effective length of query: 45
effective length of database: 133,830,547
effective search space: 6022374615
effective search space used: 6022374615
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 56 (26.2 bits)