BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047502
(145 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 75/119 (63%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 10 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 67
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + + E+ L++AF +FD + NGLISA ELR V+ NLG +K T ++ MI
Sbjct: 68 FLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLG-EKLTDDEVDEMI 125
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 9 QIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFM 66
+ FKV D +G+G +S++EL V+ LG ++ E + M+++ D +GDG I+ +EF+
Sbjct: 87 EAFKVFDRDGNGLISAAELRHVMTNLGEKLTD--DEVDEMIREADIDGDGHINYEEFV 142
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 75/119 (63%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 10 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 67
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + + E+ L++AF +FD + NGLISA ELR V+ NLG +K T ++ MI
Sbjct: 68 FLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLG-EKLTDDEVDEMI 125
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 9 QIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFM 66
+ FKV D +G+G +S++EL V+ LG ++ E + M+++ D +GDG I+ +EF+
Sbjct: 87 EAFKVFDRDGNGLISAAELRHVMTNLGEKLTD--DEVDEMIREADIDGDGHINYEEFV 142
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 74/119 (62%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
S+F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 68
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F++ + E+ L +AF +FD ++NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 69 FLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG-EKLTDEEVDEMI 126
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ ++ F+V D + +G +S++EL V+ LG ++ +E + M+++ D +GDG I+ +EF
Sbjct: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTD--EEVDEMIREADVDGDGQINYEEF 142
Query: 66 M 66
+
Sbjct: 143 V 143
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 74/119 (62%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
S+F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 68
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F++ + E+ L +AF +FD ++NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 69 FLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG-EKLTDEEVDEMI 126
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ ++ F+V D + +G +S++EL V+ LG ++ +E + M+++ D +GDG I+ DEF
Sbjct: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTD--EEVDEMIREADVDGDGQINYDEF 142
Query: 66 M 66
+
Sbjct: 143 V 143
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 73/119 (61%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 7 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 64
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F++ + E+ L +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 65 FLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEVDEMI 122
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVD 63
+ ++ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +
Sbjct: 79 EEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTD--EEVDEMIREADVDGDGQVNYE 136
Query: 64 EFM 66
EF+
Sbjct: 137 EFV 139
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 73/119 (61%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 67
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F++ + E+ L +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 68 FLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEVDEMI 125
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ ++ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 84 KLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTD--EEVDEMIREADVDGDGQVNYEEF 141
Query: 66 M 66
+
Sbjct: 142 V 142
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 73/119 (61%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 67
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F++ + E+ L +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 68 FLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEVDEMI 125
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVD 63
+ ++ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +
Sbjct: 82 EEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTD--EEVDEMIREADVDGDGQVNYE 139
Query: 64 EFM 66
EF+
Sbjct: 140 EFV 142
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +GDG ID E
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGDGTIDFPE 67
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 68 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMI 125
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 141
Query: 66 M 66
+
Sbjct: 142 V 142
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 80.5 bits (197), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E ++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +GDG ID
Sbjct: 307 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGDGTID 364
Query: 62 VDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRR 121
EF+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+
Sbjct: 365 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDE 423
Query: 122 MI 123
MI
Sbjct: 424 MI 425
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 384 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 441
Query: 66 M 66
+
Sbjct: 442 V 442
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 80.1 bits (196), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E ++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +GDG ID
Sbjct: 307 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGDGTID 364
Query: 62 VDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRR 121
EF+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+
Sbjct: 365 FPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDE 423
Query: 122 MI 123
MI
Sbjct: 424 MI 425
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 384 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 441
Query: 66 M 66
+
Sbjct: 442 V 442
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 80.1 bits (196), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E ++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +GDG ID
Sbjct: 308 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGDGTID 365
Query: 62 VDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRR 121
EF+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+
Sbjct: 366 FPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDE 424
Query: 122 MI 123
MI
Sbjct: 425 MI 426
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 442
Query: 66 M 66
+
Sbjct: 443 V 443
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 80.1 bits (196), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E ++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +GDG ID
Sbjct: 307 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGDGTID 364
Query: 62 VDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRR 121
EF+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+
Sbjct: 365 FPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDE 423
Query: 122 MI 123
MI
Sbjct: 424 MI 425
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 384 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 441
Query: 66 M 66
+
Sbjct: 442 V 442
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 79.7 bits (195), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 67
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 68 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEVDEMI 125
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 84 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 141
Query: 66 M 66
+
Sbjct: 142 V 142
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 79.7 bits (195), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 73/119 (61%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 68
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ +MI
Sbjct: 69 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDQMI 126
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDQMIREADIDGDGQVNYEEF 142
Query: 66 M 66
+
Sbjct: 143 V 143
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 79.7 bits (195), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 68
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 69 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEVDEMI 126
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD--EEVDEMIRESDIDGDGQVNYEEF 142
Query: 66 M 66
+
Sbjct: 143 V 143
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 79.7 bits (195), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 68
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 69 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEVDEMI 126
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 142
Query: 66 M 66
+
Sbjct: 143 V 143
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 79.7 bits (195), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 67
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 68 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEVDEMI 125
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 84 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 141
Query: 66 M 66
+
Sbjct: 142 V 142
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 79.7 bits (195), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 68
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 69 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEVDEMI 126
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 142
Query: 66 M 66
+
Sbjct: 143 V 143
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +GDG ID E
Sbjct: 302 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGDGTIDFPE 359
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 360 FLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMI 417
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 376 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 433
Query: 66 M 66
+
Sbjct: 434 V 434
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 79.3 bits (194), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 65
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 66 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMI 123
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 82 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 139
Query: 66 M 66
+
Sbjct: 140 V 140
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 79.3 bits (194), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 6 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 63
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 64 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMI 121
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 80 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 137
Query: 66 M 66
+
Sbjct: 138 V 138
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 79.3 bits (194), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 14 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 71
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 72 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMI 129
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 88 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 145
Query: 66 M 66
+
Sbjct: 146 V 146
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 79.3 bits (194), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 68
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 69 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMI 126
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 142
Query: 66 M 66
+
Sbjct: 143 V 143
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 79.3 bits (194), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 67
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 68 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMI 125
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ + +GDG ++ +EF
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREANIDGDGQVNYEEF 141
Query: 66 M 66
+
Sbjct: 142 V 142
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 79.3 bits (194), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 12 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 69
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 70 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMI 127
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 86 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 143
Query: 66 M 66
+
Sbjct: 144 V 144
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 79.3 bits (194), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 68
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 69 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMI 126
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 142
Query: 66 M 66
+
Sbjct: 143 V 143
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 79.3 bits (194), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 65
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 66 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMI 123
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 82 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 139
Query: 66 M 66
+
Sbjct: 140 V 140
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 79.3 bits (194), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 68
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 69 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMI 126
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 142
Query: 66 M 66
+
Sbjct: 143 V 143
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 79.3 bits (194), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 67
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 68 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMI 125
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 141
Query: 66 M 66
+
Sbjct: 142 V 142
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 79.3 bits (194), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 16 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 73
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 74 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMI 131
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 90 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 147
Query: 66 M 66
+
Sbjct: 148 V 148
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 79.3 bits (194), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 67
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 68 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMI 125
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 141
Query: 66 M 66
+
Sbjct: 142 V 142
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 79.3 bits (194), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 65
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 66 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMI 123
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 82 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 139
Query: 66 M 66
+
Sbjct: 140 V 140
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 79.3 bits (194), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 68
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 69 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMI 126
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 142
Query: 66 M 66
+
Sbjct: 143 V 143
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 79.3 bits (194), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 7 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 64
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 65 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMI 122
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 81 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 138
Query: 66 M 66
+
Sbjct: 139 V 139
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 79.0 bits (193), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 9 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 66
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 67 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMI 124
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVD 63
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +
Sbjct: 81 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYE 138
Query: 64 EFM 66
EF+
Sbjct: 139 EFV 141
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E ++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID
Sbjct: 271 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTID 328
Query: 62 VDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRR 121
EF+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+
Sbjct: 329 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDE 387
Query: 122 MI 123
MI
Sbjct: 388 MI 389
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 348 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 405
Query: 66 M 66
+
Sbjct: 406 V 406
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E ++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID
Sbjct: 274 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTID 331
Query: 62 VDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRR 121
EF+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+
Sbjct: 332 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDE 390
Query: 122 MI 123
MI
Sbjct: 391 MI 392
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 351 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 408
Query: 66 M 66
+
Sbjct: 409 V 409
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E ++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID
Sbjct: 309 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTID 366
Query: 62 VDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRR 121
EF+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+
Sbjct: 367 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDE 425
Query: 122 MI 123
MI
Sbjct: 426 MI 427
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 386 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 443
Query: 66 M 66
+
Sbjct: 444 V 444
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E ++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID
Sbjct: 308 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTID 365
Query: 62 VDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRR 121
EF+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+
Sbjct: 366 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDE 424
Query: 122 MI 123
MI
Sbjct: 425 MI 426
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 442
Query: 66 M 66
+
Sbjct: 443 V 443
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E ++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID
Sbjct: 274 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTID 331
Query: 62 VDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRR 121
EF+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+
Sbjct: 332 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDE 390
Query: 122 MI 123
MI
Sbjct: 391 MI 392
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 351 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 408
Query: 66 M 66
+
Sbjct: 409 V 409
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E ++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID
Sbjct: 308 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTID 365
Query: 62 VDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRR 121
EF+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+
Sbjct: 366 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDE 424
Query: 122 MI 123
MI
Sbjct: 425 MI 426
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 442
Query: 66 M 66
+
Sbjct: 443 V 443
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E ++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID
Sbjct: 308 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTID 365
Query: 62 VDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRR 121
EF+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+
Sbjct: 366 FPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDE 424
Query: 122 MI 123
MI
Sbjct: 425 MI 426
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 442
Query: 66 M 66
+
Sbjct: 443 V 443
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 73/119 (61%), Gaps = 5/119 (4%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 67
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + K E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 68 FLTMMA--RKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEVDEMI 123
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 82 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 139
Query: 66 M 66
+
Sbjct: 140 V 140
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E ++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID
Sbjct: 308 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTID 365
Query: 62 VDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRR 121
EF+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+
Sbjct: 366 FPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDE 424
Query: 122 MI 123
MI
Sbjct: 425 MI 426
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYEEF 442
Query: 66 M 66
+
Sbjct: 443 V 443
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 68
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E+ + +AF +FD + NG ISA ELR V+ NLG + T E+ MI
Sbjct: 69 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EXLTDEEVDEMI 126
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTD--EEVDEMIREADIDGDGQVNYEEF 142
Query: 66 M 66
+
Sbjct: 143 V 143
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 67
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E+ + +AF +FD + NG ISA ELR V+ NLG + T E+ MI
Sbjct: 68 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EXLTDEEVDEMI 125
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +EF
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTD--EEVDEMIREADIDGDGQVNYEEF 141
Query: 66 M 66
+
Sbjct: 142 V 142
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 75.9 bits (185), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 72/117 (61%), Gaps = 3/117 (2%)
Query: 7 FRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFM 66
F++ F + D +GDG ++ EL V+ L D++ +E + M+ ++D +G+G I+ DEF+
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSL--DQNPTEEELQDMISEVDADGNGTIEFDEFL 69
Query: 67 DAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
+ E+ L +AF +FD ++NG ISA ELR V+INLG +K T E+ +MI
Sbjct: 70 SLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLG-EKLTDEEVEQMI 125
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 3 VSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDV 62
+ ++ FKV D + +G +S+SEL V+I LG ++ +E E M+K+ D +GDG ++
Sbjct: 81 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTD--EEVEQMIKEADLDGDGQVNY 138
Query: 63 DEFM 66
+EF+
Sbjct: 139 EEFV 142
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 4/119 (3%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 6 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 63
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 64 FLTMMARKMKDTDSEE-IREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMI 120
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVD 63
S + R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ + +GDG ++ +
Sbjct: 77 SEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREANIDGDGQVNYE 134
Query: 64 EFM 66
EF+
Sbjct: 135 EFV 137
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 68/119 (57%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V LG + + A E + + ++D +G+G ID E
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEA--ELQDXINEVDADGNGTIDFPE 68
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ E+ + +AF +FD + NG ISA ELR V NLG +K T E+ + I
Sbjct: 69 FLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLG-EKLTDEEVDQXI 126
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V LG ++ +E + +++ D +GDG ++ +EF
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTD--EEVDQXIREADIDGDGQVNYEEF 142
Query: 66 M 66
+
Sbjct: 143 V 143
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 68/119 (57%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V LGC+ + A E + + ++D +G+G I+ E
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEA--ELQDXINEVDADGNGTINFPE 67
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ E+ + +AF +FD + NG ISA ELR V NLG +K T E+ I
Sbjct: 68 FLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLG-EKLTDEEVDEXI 125
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V LG ++ +E + +++ D +GDG ++ +EF
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTD--EEVDEXIREADIDGDGQVNYEEF 141
Query: 66 M 66
+
Sbjct: 142 V 142
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 72.8 bits (177), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V LG + + A E + + ++D +G+G ID E
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEA--ELQDXINEVDADGNGTIDFPE 67
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ E+ + +AF +FD + NG ISA ELR V NLG +K T E+ I
Sbjct: 68 FLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLG-EKLTDEEVDEXI 125
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V LG ++ +E + +++ D +GDG ++ +EF
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTD--EEVDEXIREADIDGDGQVNYEEF 141
Query: 66 M 66
+
Sbjct: 142 V 142
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E ++F++ F + D +GDG +++ ELG V+ LG + + A E M+ ++D +G+G +D
Sbjct: 7 EQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEA--ELRDMMSEIDRDGNGTVD 64
Query: 62 VDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRR 121
EF+ + E+ + +AF +FD + NG +SA ELR V+ LG +K + E+
Sbjct: 65 FPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLG-EKLSDEEVDE 123
Query: 122 MI 123
MI
Sbjct: 124 MI 125
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F+V D +G+G +S++EL V+ LG S+ +E + M++ D +GDG ++ +EF
Sbjct: 84 EIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSD--EEVDEMIRAADTDGDGQVNYEEF 141
Query: 66 M 66
+
Sbjct: 142 V 142
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 69.7 bits (169), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E ++F++ F + D +GDG +++ +LG V+ LG + + A E + M+ ++ +G+G ID
Sbjct: 308 EQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEA--ELQDMINEVGADGNGTID 365
Query: 62 VDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRR 121
+F+ + E+ + +AF +F + NG ISA +LR V+ NLG +K T E+
Sbjct: 366 FPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLG-EKLTDEEVDE 424
Query: 122 MI 123
MI
Sbjct: 425 MI 426
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 2/106 (1%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D + +G +SSSEL V+ LG S A E ++ ++D +G+ I+ E
Sbjct: 11 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEA--EVNDLMNEIDVDGNHQIEFSE 68
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
F+ + E L++AF +FD N +GLISA EL+ VL ++G
Sbjct: 69 FLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG 114
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 2/106 (1%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D + +G +SSSEL V+ LG S A E ++ ++D +G+ I+ E
Sbjct: 10 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEA--EVNDLMNEIDVDGNHQIEFSE 67
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
F+ + E L++AF +FD N +GLISA EL+ VL ++G
Sbjct: 68 FLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG 113
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 2/106 (1%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D + +G +SSSEL V+ LG S A E ++ ++D +G+ I+ E
Sbjct: 10 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEA--EVNDLMNEIDVDGNHQIEFSE 67
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
F+ + E L++AF +FD N +GLISA EL+ VL ++G
Sbjct: 68 FLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG 113
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 67/119 (56%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D + G +S+SEL V+ LG S A E ++ ++D +G+ I+ E
Sbjct: 11 AEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEA--EVADLMNEIDVDGNHAIEFSE 68
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + E L++AF +FD N +GLISA EL+ VL ++G +K T + M+
Sbjct: 69 FLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG-EKLTDAEVDEML 126
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 73/127 (57%), Gaps = 10/127 (7%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEA-EGMLKQMDYNGDGFI 60
E+ ++F+ F + D++G G +S+ ELG V+ LG N TKE + +++++D +G G I
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG---QNPTKEELDAIIEEVDEDGSGTI 73
Query: 61 DVDEFM----DAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTL 116
D +EF+ + +D+ GK +E+ L D F IFD N +G I EL +L G + T
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEE-LADCFRIFDKNADGFIDIEELGEILRATG-EHVTE 131
Query: 117 EDCRRMI 123
ED ++
Sbjct: 132 EDIEDLM 138
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 11 FKVMDSNGDGKLSSSELGEVLICLGCDKSNATKE-AEGMLKQMDYNGDGFIDVDEFM 66
F++ D N DG + ELGE+L G + T+E E ++K D N DG ID DEF+
Sbjct: 102 FRIFDKNADGFIDIEELGEILRATG---EHVTEEDIEDLMKDSDKNNDGRIDFDEFL 155
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F+ F D G GK+++ ELG ++ LG + + A E + ++ + + N +G ++ E
Sbjct: 10 AEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEA--ELQDLIAEAENNNNGQLNFTE 67
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F + E+ + +AF IFD + +G IS ELR V+INLG +K T E+ MI
Sbjct: 68 FCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLG-EKVTDEEIDEMI 125
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 3 VSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDV 62
+ R+ FK+ D +GDG +S +EL V+I LG ++ +E + M+++ D++GDG I+
Sbjct: 81 TEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTD--EEIDEMIREADFDGDGMINY 138
Query: 63 DEFM 66
+EF+
Sbjct: 139 EEFV 142
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 73/127 (57%), Gaps = 10/127 (7%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEA-EGMLKQMDYNGDGFI 60
E+ ++F+ F + D++G G +S+ ELG V+ LG N TKE + +++++D +G G I
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG---QNPTKEELDAIIEEVDEDGSGTI 73
Query: 61 DVDEFM----DAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTL 116
D +EF+ + +D+ GK +E+ L D F IFD N +G I EL +L G + T
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEE-LEDCFRIFDKNADGFIDIEELGEILRATG-EHVTE 131
Query: 117 EDCRRMI 123
ED ++
Sbjct: 132 EDIEDLM 138
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 11 FKVMDSNGDGKLSSSELGEVLICLGCDKSNATKE-AEGMLKQMDYNGDGFIDVDEFM 66
F++ D N DG + ELGE+L G + T+E E ++K D N DG ID DEF+
Sbjct: 102 FRIFDKNADGFIDIEELGEILRATG---EHVTEEDIEDLMKDSDKNNDGRIDFDEFL 155
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 73/127 (57%), Gaps = 10/127 (7%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEA-EGMLKQMDYNGDGFI 60
E+ ++F+ F + D++G G +S+ ELG V+ LG N TKE + +++++D +G G I
Sbjct: 14 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG---QNPTKEELDAIIEEVDEDGSGTI 70
Query: 61 DVDEFM----DAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTL 116
D +EF+ + +D+ GK +E+ L + F IFD N +G I EL +L G + T
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEE-LANCFRIFDKNADGFIDIEELGEILRATG-EHVTE 128
Query: 117 EDCRRMI 123
ED ++
Sbjct: 129 EDIEDLM 135
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 11 FKVMDSNGDGKLSSSELGEVLICLGCDKSNATKE-AEGMLKQMDYNGDGFIDVDEFM 66
F++ D N DG + ELGE+L G + T+E E ++K D N DG ID DEF+
Sbjct: 99 FRIFDKNADGFIDIEELGEILRATG---EHVTEEDIEDLMKDSDKNNDGRIDFDEFL 152
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 3/122 (2%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E + R+ F + D++G G + + EL + LG + +E + M+ ++D +G G ID
Sbjct: 25 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKK--EEIKKMISEIDKDGSGTID 82
Query: 62 VDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRR 121
+EF+ + G + + ++ AF +FD + +G I+ +LRRV LG + T E+ +
Sbjct: 83 FEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELG-ENLTEEELQE 141
Query: 122 MI 123
MI
Sbjct: 142 MI 143
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 9 QIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEA-EGMLKQMDYNGDGFIDVDEFM 66
+ F++ D + G ++ +L V LG N T+E + M+ + D N D ID DEF+
Sbjct: 105 KAFRLFDDDNSGTITIKDLRRVAKELG---ENLTEEELQEMIAEADRNDDNEIDEDEFI 160
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 73/127 (57%), Gaps = 10/127 (7%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEA-EGMLKQMDYNGDGFI 60
E+ ++F+ F + D++G G +S+ ELG V+ LG N TKE + +++++D +G G I
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG---QNPTKEELDAIIEEVDEDGSGTI 73
Query: 61 DVDEFM----DAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTL 116
D +EF+ + +D+ GK +E+ L + F IFD N +G I EL +L G + T
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEE-LANCFRIFDKNADGFIDIEELGEILRATG-EHVTE 131
Query: 117 EDCRRMI 123
ED ++
Sbjct: 132 EDIEDLM 138
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 11 FKVMDSNGDGKLSSSELGEVLICLGCDKSNATKE-AEGMLKQMDYNGDGFIDVDEFM 66
F++ D N DG + ELGE+L G + T+E E ++K D N DG ID DEF+
Sbjct: 102 FRIFDKNADGFIDIEELGEILRATG---EHVTEEDIEDLMKDSDKNNDGRIDFDEFL 155
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 9 QIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMDA 68
+IFK D+NGDGK+SSSELG+ L LG S E M+ ++D +GDGFI DEF D
Sbjct: 15 RIFKRFDTNGDGKISSSELGDALKTLG---SVTPDEVRRMMAEIDTDGDGFISFDEFTDF 71
Query: 69 VHDDSG 74
+ G
Sbjct: 72 ARANRG 77
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 67/114 (58%), Gaps = 9/114 (7%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEA-EGMLKQMDYNGDGFI 60
E+ ++F+ F + D++G G +S+ ELG V+ LG N TKE + +++++D +G G I
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG---QNPTKEELDAIIEEVDEDGSGTI 73
Query: 61 DVDEFM----DAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
D +EF+ + +D+ GK +E+ L + F IFD N +G I EL +L G
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEE-LANCFRIFDKNADGFIDIEELGEILRATG 126
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 11 FKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFM 66
F++ D N DG + ELGE+L G + ++ E ++K D N DG ID DEF+
Sbjct: 102 FRIFDKNADGFIDIEELGEILRATG--EHVIEEDIEDLMKDSDKNNDGRIDFDEFL 155
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 65/109 (59%), Gaps = 7/109 (6%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E+ ++F+ F + D++G G +S ELG V+ LG ++ +E + +++++D +G G ID
Sbjct: 14 EMIAEFKAAFDMFDADGGGDISVKELGTVMRMLG--QTPTKEELDAIIEEVDEDGSGTID 71
Query: 62 VDEFM----DAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVL 106
+EF+ + +D+ GK +E+ L + F IFD N +G I A EL +
Sbjct: 72 FEEFLVMMVRQMKEDAKGKSEEE-LAECFRIFDRNADGYIDAEELAEIF 119
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 11 FKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFM 66
F++ D N DG + + EL E+ G ++ +E E ++K D N DG ID DEF+
Sbjct: 99 FRIFDRNADGYIDAEELAEIFRASGEHVTD--EEIESLMKDGDKNNDGRIDFDEFL 152
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 65/109 (59%), Gaps = 7/109 (6%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E+ ++F+ F + D++G G +S ELG V+ LG ++ +E + +++++D +G G ID
Sbjct: 14 EMIAEFKAAFDMFDADGGGDISVKELGTVMRMLG--QTPTKEELDAIIEEVDEDGSGTID 71
Query: 62 VDEFM----DAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVL 106
+EF+ + +D+ GK +E+ L + F IFD N +G I A EL +
Sbjct: 72 FEEFLVMMVRQMKEDAKGKSEEE-LAELFRIFDRNADGYIDAEELAEIF 119
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVD 63
+ ++F++ D N DG + + EL E+ G ++ +E E ++K D N DG ID D
Sbjct: 92 EEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTD--EEIESLMKDGDKNNDGRIDFD 149
Query: 64 EFM 66
EF+
Sbjct: 150 EFL 152
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E + R+ F + D++G G + + EL + LG + +E + M+ +D +G G ID
Sbjct: 5 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKK--EEIKKMIADIDKDGSGTID 62
Query: 62 VDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRR 121
+EF+ + G + + +M AF +FD ++ G IS L+RV LG + T E+ +
Sbjct: 63 FEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELG-ENMTDEELQE 121
Query: 122 MI 123
MI
Sbjct: 122 MI 123
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 9 QIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ F++ D + GK+S L V LG + ++ +E + M+ + D +GDG ++ +EF
Sbjct: 85 KAFRLFDDDETGKISFKNLKRVAKELGENMTD--EELQEMIDEADRDGDGEVNEEEF 139
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Query: 9 QIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMD 67
+IFK D+NGDGK+S++ELGE L LG S E + M+ ++D +GDGFI EF D
Sbjct: 13 RIFKRFDANGDGKISAAELGEALKTLG---SITPDEVKHMMAEIDTDGDGFISFQEFTD 68
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 9 QIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMDA 68
+IFK D+NGDGK+S SEL + L LG S + E + M+ ++D +GDGFID +EF+
Sbjct: 7 RIFKRFDTNGDGKISLSELTDALRTLG---STSADEVQRMMAEIDTDGDGFIDFNEFISF 63
Query: 69 VHDDSG 74
+ + G
Sbjct: 64 CNANPG 69
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 9 QIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMDA 68
+IFK D+NGDGK+S SEL + L LG S + E + M+ ++D +GDGFID +EF+
Sbjct: 6 RIFKRFDTNGDGKISLSELTDALRTLG---STSADEVQRMMAEIDTDGDGFIDFNEFISF 62
Query: 69 VHDDSG 74
+ + G
Sbjct: 63 CNANPG 68
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 71/127 (55%), Gaps = 9/127 (7%)
Query: 2 EVSSQFRQIFKVMDSNG-DGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFI 60
E ++F+ F + DG +S+ ELG+V+ LG ++ +E + M+ ++D +G G +
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG--QNPTPEELQEMIDEVDEDGSGTV 72
Query: 61 DVDEFM----DAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTL 116
D DEF+ ++ DDS GK +E+ L D F +FD N +G I EL ++++ + T
Sbjct: 73 DFDEFLVMMVRSMKDDSKGKTEEE-LSDLFRMFDKNADGYIDLEEL-KIMLQATGETITE 130
Query: 117 EDCRRMI 123
+D ++
Sbjct: 131 DDIEELM 137
Score = 33.1 bits (74), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 3 VSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDV 62
+ +F++ D N DG + EL +L G ++ + E ++K D N DG ID
Sbjct: 93 TEEELSDLFRMFDKNADGYIDLEELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDY 150
Query: 63 DEFMD 67
DEF++
Sbjct: 151 DEFLE 155
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 71/127 (55%), Gaps = 9/127 (7%)
Query: 2 EVSSQFRQIFKVMDSNG-DGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFI 60
E ++F+ F + DG +S+ ELG+V+ LG ++ +E + M+ ++D +G G +
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG--QNPTPEELQEMIDEVDEDGSGTV 72
Query: 61 DVDEFM----DAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTL 116
D DEF+ ++ DDS GK +E+ L D F +FD N +G I EL ++++ + T
Sbjct: 73 DFDEFLVMMVRSMKDDSKGKSEEE-LSDLFRMFDKNADGYIDLEEL-KIMLQATGETITE 130
Query: 117 EDCRRMI 123
+D ++
Sbjct: 131 DDIEELM 137
Score = 33.1 bits (74), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVD 63
+ +F++ D N DG + EL +L G ++ + E ++K D N DG ID D
Sbjct: 94 EEELSDLFRMFDKNADGYIDLEELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 64 EFMD 67
EF++
Sbjct: 152 EFLE 155
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 15/126 (11%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNA--------TKEAEGMLKQMDYNGD 57
+F++ F++ D GDGK+ S+ G+V+ LG + +NA K E +++D+ +
Sbjct: 11 EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDF--E 68
Query: 58 GFIDVDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLE 117
F+ + + AV + G EDYL + F +FD NG + ELR VL LG +K T E
Sbjct: 69 TFLPM---LQAVAKNRGQGTYEDYL-EGFRVFDKEGNGKVMGAELRHVLTTLG-EKMTEE 123
Query: 118 DCRRMI 123
+ ++
Sbjct: 124 EVETVL 129
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 71/127 (55%), Gaps = 9/127 (7%)
Query: 2 EVSSQFRQIFKVMDSNG-DGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFI 60
E ++F+ F + DG +S+ ELG+V+ LG ++ +E + M+ ++D +G G +
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG--QNPTPEELQEMIDEVDEDGSGTV 72
Query: 61 DVDEFM----DAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTL 116
D DEF+ ++ DDS GK +E+ L D F +FD N +G I EL ++++ + T
Sbjct: 73 DFDEFLVMMVRSMKDDSKGKSEEE-LSDLFRMFDKNADGYIDLDEL-KIMLQATGETITE 130
Query: 117 EDCRRMI 123
+D ++
Sbjct: 131 DDIEELM 137
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVD 63
+ +F++ D N DG + EL +L G ++ + E ++K D N DG ID D
Sbjct: 94 EEELSDLFRMFDKNADGYIDLDELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 64 EFMD 67
E+++
Sbjct: 152 EWLE 155
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 71/127 (55%), Gaps = 9/127 (7%)
Query: 2 EVSSQFRQIFKVMDSNG-DGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFI 60
E ++F+ F + DG +S+ ELG+V+ LG ++ +E + M+ ++D +G G +
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG--QNPTPEELQEMIDEVDEDGSGTV 72
Query: 61 DVDEFM----DAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTL 116
D DEF+ ++ DDS GK +E+ L D F +FD N +G I EL ++++ + T
Sbjct: 73 DFDEFLVMMVRSMKDDSKGKSEEE-LSDLFRMFDKNADGYIDLDEL-KIMLQATGETITE 130
Query: 117 EDCRRMI 123
+D ++
Sbjct: 131 DDIEELM 137
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVD 63
+ +F++ D N DG + EL +L G ++ + E ++K D N DG ID D
Sbjct: 94 EEELSDLFRMFDKNADGYIDLDELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 64 ---EFMDAVH 70
EFM V
Sbjct: 152 EXLEFMKGVE 161
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 21/133 (15%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNA--------TKEAEGMLKQMD 53
E +++F++ F++ D GDGK+ S+ G+V+ LG + +NA K E LK +
Sbjct: 4 EQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLK 63
Query: 54 YNGDGFIDVDEFMDAVHDDSGGKPK---EDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
+ ++F+ + + K + EDY+ + +FD NG + E+R VL+ LG
Sbjct: 64 F--------EQFLPMMQTIAKNKDQGCFEDYV-EGLRVFDKEGNGTVMGAEIRHVLVTLG 114
Query: 111 CDKCTLEDCRRMI 123
+K T E+ +++
Sbjct: 115 -EKMTEEEVEQLV 126
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 21/133 (15%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNA--------TKEAEGMLKQMD 53
E +++F++ F++ D GDGK+ S+ G+V+ LG + +NA K E LK +
Sbjct: 6 EQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLK 65
Query: 54 YNGDGFIDVDEFMDAVHDDSGGKPK---EDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
+ ++F+ + + K + EDY+ + +FD NG + E+R VL+ LG
Sbjct: 66 F--------EQFLPMMQTIAKNKDQGCFEDYV-EGLRVFDKEGNGTVMGAEIRHVLVTLG 116
Query: 111 CDKCTLEDCRRMI 123
+K T E+ +++
Sbjct: 117 -EKMTEEEVEQLV 128
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 71/127 (55%), Gaps = 9/127 (7%)
Query: 2 EVSSQFRQIFKVMDSNG-DGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFI 60
E ++F+ F + DG +S+ ELG+V+ LG ++ +E + M+ ++D +G G +
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG--QNPTPEELQEMIDEVDEDGSGTV 72
Query: 61 DVDEFM----DAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTL 116
D DEF+ ++ DDS GK +E+ L D F ++D N +G I EL ++++ + T
Sbjct: 73 DFDEFLVMMVRSMKDDSKGKSEEE-LSDLFRMWDKNADGYIDLDEL-KIMLQATGETITE 130
Query: 117 EDCRRMI 123
+D ++
Sbjct: 131 DDIEELM 137
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVD 63
+ +F++ D N DG + EL +L G ++ + E ++K D N DG ID D
Sbjct: 94 EEELSDLFRMWDKNADGYIDLDELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 64 EFMD 67
EF++
Sbjct: 152 EFLE 155
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
Query: 2 EVSSQFRQIFKVMDSNG-DGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFI 60
E ++F+ F + DG +S+ ELG+V+ LG ++ +E + M+ ++D +G G +
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLG--QNPTPEELQEMIDEVDEDGSGTV 72
Query: 61 DVDEFM----DAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
D DEF+ + DDS GK +E+ L D F +FD N +G I EL+ +L G
Sbjct: 73 DFDEFLVMMVRCMKDDSKGKTEEE-LSDLFRMFDKNADGYIDLEELKIMLQATG 125
Score = 33.5 bits (75), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 3 VSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDV 62
+ +F++ D N DG + EL +L G ++ + E ++K D N DG ID
Sbjct: 93 TEEELSDLFRMFDKNADGYIDLEELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDY 150
Query: 63 DEFMD 67
DEF++
Sbjct: 151 DEFLE 155
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 7/112 (6%)
Query: 1 MEVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKS------NATKEAEGMLKQMDY 54
+E + IFK +D NGDG+L EL E L K+ N +E + +LK++D+
Sbjct: 351 LEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDF 410
Query: 55 NGDGFIDVDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVL 106
+ +G+I+ EF+ +V D E+ L AF +FD +K+G I+ EL +
Sbjct: 411 DKNGYIEYSEFI-SVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLF 461
Score = 32.7 bits (73), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ F + D++ GK++ EL + S + K +L + D N D ID DEF
Sbjct: 436 RLRRAFNLFDTDKSGKITKEELANLFGLT----SISEKTWNDVLGEADQNKDNMIDFDEF 491
Query: 66 MDAVH 70
+ +H
Sbjct: 492 VSMMH 496
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNAT-KEAEGMLKQMDYNGDGFIDVDE 64
Q ++ F++ D + DGK+S ELG L LG + +NA +G L +++ F
Sbjct: 6 QIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFDLATF----- 60
Query: 65 FMDAVHDDSGGKPKEDY--LMDAFLIFDINKNGLISAMELRRVLINLG 110
V+ P E ++DAF D NG I ELR++L+NLG
Sbjct: 61 --KTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLG 106
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E S + F+ +D G+G + +EL ++L+ LG + + E E ++K++ +GDG I+
Sbjct: 73 EQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLG--DALTSSEVEELMKEVSVSGDGAIN 130
Query: 62 VDEFMD 67
+ F+D
Sbjct: 131 YESFVD 136
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E ++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +GDG ID
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGDGTID 64
Query: 62 VDEFM 66
EF+
Sbjct: 65 FPEFL 69
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 9/127 (7%)
Query: 2 EVSSQFRQIFKVMDSNG-DGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFI 60
E ++F+ F + DG +S+ ELG+V+ LG ++ +E + M+ ++D +G G +
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG--QNPTPEELQEMIDEVDEDGSGTV 72
Query: 61 DVDEFM----DAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTL 116
D DEF+ ++ DDS GK +E+ L D F + D N +G I EL ++++ + T
Sbjct: 73 DFDEFLVMMVRSMKDDSKGKSEEE-LSDLFRMXDKNADGYIDLDEL-KIMLQATGETITE 130
Query: 117 EDCRRMI 123
+D ++
Sbjct: 131 DDIEELM 137
Score = 32.3 bits (72), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVD 63
+ +F++ D N DG + EL +L G ++ + E ++K D N DG ID D
Sbjct: 94 EEELSDLFRMXDKNADGYIDLDELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 64 EFMD 67
EF++
Sbjct: 152 EFLE 155
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 44 EAEGMLKQMDYNGDGFIDVDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELR 103
E + M+ ++D +G+G ID EF+ + E+ + +AF +FD + NG ISA ELR
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 61
Query: 104 RVLINLG 110
V+ NLG
Sbjct: 62 HVMTNLG 68
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLG 35
+ R+ F+V D +G+G +S++EL V+ LG
Sbjct: 39 EIREAFRVFDKDGNGYISAAELRHVMTNLG 68
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E ++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID
Sbjct: 7 EQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEA--ELQDMINEVDADGNGTID 64
Query: 62 VDEFM 66
EF+
Sbjct: 65 FPEFL 69
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 67
Query: 65 FM 66
F+
Sbjct: 68 FL 69
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E ++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTID 64
Query: 62 VDEFM 66
EF+
Sbjct: 65 FPEFL 69
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E ++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTID 64
Query: 62 VDEFM 66
EF+
Sbjct: 65 FPEFL 69
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 67
Query: 65 FM 66
F+
Sbjct: 68 FL 69
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 67
Query: 65 FM 66
F+
Sbjct: 68 FL 69
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID E
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPE 68
Query: 65 FM 66
F+
Sbjct: 69 FL 70
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E ++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTID 64
Query: 62 VDEFM 66
EF+
Sbjct: 65 FPEFL 69
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E ++F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTID 64
Query: 62 VDEFM 66
EF+
Sbjct: 65 FPEFL 69
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E + R+ F + D++G G + EL + LG + +E + M+ ++D G G ++
Sbjct: 3 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKK--EEIKKMISEIDKEGTGKMN 60
Query: 62 VDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRR 121
+F+ + K ++ ++ AF +FD ++ G IS L+RV LG + T E+ +
Sbjct: 61 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLTDEELQE 119
Query: 122 MI 123
MI
Sbjct: 120 MI 121
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 9 QIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFM 66
+ FK+ D + GK+S L V LG + ++ +E + M+ + D +GDG + EF+
Sbjct: 83 KAFKLFDDDETGKISFKNLKRVAKELGENLTD--EELQEMIDEADRDGDGEVSEQEFL 138
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E S+F++ F + D +GDG +++ ELG V+ LG + + A E + M+ ++D +G+G ID
Sbjct: 7 EQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTID 64
Query: 62 VDEFMD 67
EF++
Sbjct: 65 FPEFLN 70
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
S ++Q F + D +G G++ + +G++L G + + A + +++ +D+++
Sbjct: 5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAE------ITEIESTLPAEVDMEQ 58
Query: 65 FMDAVHDDSG----GKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
F+ ++ +G G P+E + F +FD + G+I ELR VL +LG
Sbjct: 59 FLQVLNRPNGFDMPGDPEE--FVKGFQVFDKDATGMIGVGELRYVLTSLG 106
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 1 MEVSSQFRQIFKVMDSNGDGKLSSSELGEVLICL---------GCDKSNATKEAEGMLKQ 51
+E + + QIF+ +D+NGDG+L EL E L D S E + +L+
Sbjct: 310 LEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQS 369
Query: 52 MDYNGDGFIDVDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVL 106
+D++ +G+I+ EF+ D +E L+ AF FD + +G I+ EL R+
Sbjct: 370 VDFDRNGYIEYSEFVTVCMDKQLLLSRER-LLAAFQQFDSDGSGKITNEELGRLF 423
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 11 FKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMD 67
F+ DS+G GK+++ ELG + D + +L++ D N DG +D +EF++
Sbjct: 403 FQQFDSDGSGKITNEELGRLFGVTEVDDETWHQ----VLQECDKNNDGEVDFEEFVE 455
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 1 MEVSSQFRQIFKVMDSNGDGKLSSSELGEVLICL---------GCDKSNATKEAEGMLKQ 51
+E + + QIF+ +D+NGDG+L EL E L D S E + +L+
Sbjct: 36 LEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQS 95
Query: 52 MDYNGDGFIDVDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVL 106
+D++ +G+I+ EF+ D +E L+ AF FD + +G I+ EL R+
Sbjct: 96 VDFDRNGYIEYSEFVTVCMDKQLLLSRE-RLLAAFQQFDSDGSGKITNEELGRLF 149
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 11 FKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMDAVH 70
F+ DS+G GK+++ ELG + D + +L++ D N DG +D +EF++ +
Sbjct: 129 FQQFDSDGSGKITNEELGRLFGVTEVDDETWHQ----VLQECDKNNDGEVDFEEFVEMMQ 184
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 57/130 (43%), Gaps = 14/130 (10%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSEL--------GEVLICLGCDKSNATKEAEGMLKQMD 53
E + + IF+ +D NGDG+L EL GE + D E + +L D
Sbjct: 343 EETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVF--DLPQIESEVDAILGAAD 400
Query: 54 YNGDGFIDVDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDK 113
++ +G+ID EF+ D K D L AF FD + NG IS EL V G D
Sbjct: 401 FDRNGYIDYSEFVTVAMDRKSLLSK-DKLESAFQKFDQDGNGKISVDELASV---FGLDH 456
Query: 114 CTLEDCRRMI 123
+ + MI
Sbjct: 457 LESKTWKEMI 466
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 11 FKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
F+ D +G+GK+S EL V G D +K + M+ +D N DG +D +EF
Sbjct: 432 FQKFDQDGNGKISVDELASVF---GLDHLE-SKTWKEMISGIDSNNDGDVDFEEF 482
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 57/130 (43%), Gaps = 14/130 (10%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSEL--------GEVLICLGCDKSNATKEAEGMLKQMD 53
E + + IF+ +D NGDG+L EL GE + D E + +L D
Sbjct: 60 EETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVF--DLPQIESEVDAILGAAD 117
Query: 54 YNGDGFIDVDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDK 113
++ +G+ID EF+ D K D L AF FD + NG IS EL V G D
Sbjct: 118 FDRNGYIDYSEFVTVAMDRKSLLSK-DKLESAFQKFDQDGNGKISVDELASV---FGLDH 173
Query: 114 CTLEDCRRMI 123
+ + MI
Sbjct: 174 LESKTWKEMI 183
Score = 30.8 bits (68), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 8/57 (14%)
Query: 11 FKVMDSNGDGKLSSSELGEVLICLGCD--KSNATKEAEGMLKQMDYNGDGFIDVDEF 65
F+ D +G+GK+S EL V G D +S KE M+ +D N DG +D +EF
Sbjct: 149 FQKFDQDGNGKISVDELASVF---GLDHLESKTWKE---MISGIDSNNDGDVDFEEF 199
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 6 QFRQIFKVMD--SNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVD 63
+ R++F + D DG + ++++G++L CLG + + A G K+M G+ ++
Sbjct: 10 EVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKKM---GEKAYKLE 66
Query: 64 EFMDAVHDDSGGK---PKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDC 119
E + ++++ K D M+AF FD GLIS+ E+R VL LG ++ T + C
Sbjct: 67 EIL-PIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLG-ERITEDQC 123
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 3 VSSQFRQIFKVMDSNGDGKLSSSELGEVLICLG 35
+ +F + FK D G G +SS+E+ VL LG
Sbjct: 83 AADEFMEAFKTFDREGQGLISSAEIRNVLKMLG 115
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 79 EDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
E+ L +AF +FD ++NG ISA ELR V+INLG +K T E+ +MI
Sbjct: 8 EEELKEAFKVFDKDQNGYISASELRHVMINLG-EKLTDEEVEQMI 51
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 3 VSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDV 62
+ ++ FKV D + +G +S+SEL V+I LG ++ +E E M+K+ D +GDG ++
Sbjct: 7 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTD--EEVEQMIKEADLDGDGQVNY 64
Query: 63 DEFM 66
+EF+
Sbjct: 65 EEFV 68
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 79 EDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
E+ L +AF +FD ++NG ISA ELR V+INLG +K T E+ +MI
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVMINLG-EKLTDEEVEQMI 46
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVD 63
+ ++ FKV D + +G +S+SEL V+I LG ++ +E E M+K+ D +GDG ++ +
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTD--EEVEQMIKEADLDGDGQVNYE 60
Query: 64 EFM 66
EF+
Sbjct: 61 EFV 63
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Query: 7 FRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNA-TKEAEGMLKQMDYNGDGFIDVDEF 65
F++ F + D GD K+++S++G++ LG + +NA + G + + N I +EF
Sbjct: 10 FKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAA-ITFEEF 68
Query: 66 MDAVHDDSGGKPK---EDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
+ + + K + ED++ + +FD NG + ELR VL LG
Sbjct: 69 LPMLQAAANNKDQGTFEDFV-EGLRVFDKEGNGTVMGAELRHVLATLG 115
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Query: 7 FRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNA-TKEAEGMLKQMDYNGDGFIDVDEF 65
F++ F + D GD K+++S++G++ LG + +NA + G + + N I +EF
Sbjct: 8 FKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAA-ITFEEF 66
Query: 66 MDAVHDDSGGKPK---EDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
+ + + K + ED++ + +FD NG + ELR VL LG
Sbjct: 67 LPMLQAAANNKDQGTFEDFV-EGLRVFDKEGNGTVMGAELRHVLATLG 113
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
+ R IF +D + G LSS E+ + L +G K + +L+ +D N G I +
Sbjct: 57 NNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQK--IPPDIHQVLRDIDSNASGQIHYTD 114
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVL 106
F+ A D KE L+ F FDI+ NG IS EL+R+
Sbjct: 115 FLAATIDKQTYLKKEVCLI-PFKFFDIDGNGKISVEELKRIF 155
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 11 FKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFM 66
FK D +G+GK+S EL + + K + +L+++D NGDG ID EFM
Sbjct: 135 FKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFM 190
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 9/119 (7%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEA-EGMLKQMDYNGDGFIDVD 63
+F++ F ++D N DG + +L ++L +G N T E EGM+ + G I+
Sbjct: 7 QEFKEAFNMIDQNRDGFIDKEDLHDMLASMG---KNPTDEYLEGMMSE----APGPINFT 59
Query: 64 EFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRM 122
F+ + G ED + +AF FD +G I LR +L +G D+ T E+ M
Sbjct: 60 MFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMG-DRFTDEEVDEM 117
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
S+F++ F++ DS G ++ L VL G A M + D G+G I E
Sbjct: 6 SEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNE--MFNEADATGNGKIQFPE 63
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
F+ + ED L AF FD G I L+ L+NLG
Sbjct: 64 FLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLG 109
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
+ R F+ D+NGDG++S+SEL E + L ++ E +++ +D NGDG +D +E
Sbjct: 88 KELRDAFREFDTNGDGEISTSELREAMRAL-LGHQVGHRDIEEIIRDVDLNGDGRVDFEE 146
Query: 65 FM 66
F+
Sbjct: 147 FV 148
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
+ R+ F+ D + DG ++ +LG + +G + E + +Q++ N G +D D+
Sbjct: 11 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEM--ELIELSQQINMNLGGHVDFDD 68
Query: 65 FMDAVHDDSGGKPKE----DYLMDAFLIFDINKNGLISAMELRRVLINL 109
F++ + + + L DAF FD N +G IS ELR + L
Sbjct: 69 FVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRAL 117
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 40 NATKEAEGMLKQMDYNGDGFIDVDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISA 99
+A+K AE + + D NGDG ID EF+ A+ S GK E L AF ++D++ NG IS
Sbjct: 60 DASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGK-LEQKLKWAFSMYDLDGNGYISK 118
Query: 100 MELRRVL 106
E+ ++
Sbjct: 119 AEMLEIV 125
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVL----------ICLGCDKSNATKEAEGMLKQ 51
++ + + F + D +G+G +S +E+ E++ + + D+S K E + +Q
Sbjct: 96 KLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQ 155
Query: 52 MDYNGDGFIDVDEFMDAVHDDS 73
MD N DG + ++EF+ D
Sbjct: 156 MDTNRDGKLSLEEFIRGAKSDP 177
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 9 QIFKVMDSNGDGKLSSSELGEVLICLG-CDKSNATKEAEGMLKQMDYNGDGFIDVDEFMD 67
+F+ D+NGDG + + E +I L + ++ + D +G+G+I E ++
Sbjct: 67 HVFRTFDANGDGTI---DFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLE 123
Query: 68 AVH 70
V
Sbjct: 124 IVQ 126
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Query: 7 FRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNA-TKEAEGMLKQMDYNGDGFIDVDEF 65
F++ F + D GD K++ S++G+++ LG + +NA + G + + N I +EF
Sbjct: 6 FKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKK-ITFEEF 64
Query: 66 MDAVHDDSGGKPK---EDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
+ + + K + ED++ + +FD NG + ELR VL LG
Sbjct: 65 LPMLQAAANNKDQGTFEDFV-EGLRVFDKEGNGTVMGAELRHVLATLG 111
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 9 QIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMDA 68
+ F+ +D +G L + E + L LG A EAEG+ ++ D NG G +D++EF+ A
Sbjct: 41 RFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQA--EAEGVCRKWDRNGSGTLDLEEFLRA 98
Query: 69 VHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRV 105
+ + +E + AF D + +G+++ +LR V
Sbjct: 99 LRPPM-SQAREAVIAAAFAKLDRSGDGVVTVDDLRGV 134
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R F+ D+NGDG++S+SEL E + L ++ E +++ +D NGDG +D +EF
Sbjct: 8 ELRDAFREFDTNGDGEISTSELREAMRKL-LGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 66
Query: 66 M 66
+
Sbjct: 67 V 67
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 82 LMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
L DAF FD N +G IS ELR + L + D +I
Sbjct: 9 LRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEII 50
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEA-EGMLKQMDYNGDGFI 60
E+ ++F+ F + D++G G +S+ ELG V+ LG N TKE + +++++D +G G I
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG---QNPTKEELDAIIEEVDEDGSGTI 73
Query: 61 DVDEFM 66
D +EF+
Sbjct: 74 DFEEFL 79
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 79 EDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
E+ L +AF +FD ++NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 3 EEELKEAFRVFDKDQNGFISAAELRHVMTNLG-EKLTDEEVDEMI 46
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVD 63
+ ++ F+V D + +G +S++EL V+ LG ++ +E + M+++ D +GDG I+ +
Sbjct: 3 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTD--EEVDEMIREADVDGDGQINYE 60
Query: 64 EFM 66
EF+
Sbjct: 61 EFV 63
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEA-EGMLKQMDYNGDGFI 60
E+ ++F+ F + D++G G +S+ ELG V+ LG N TKE + +++++D +G G I
Sbjct: 6 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG---QNPTKEELDAIIEEVDEDGSGTI 62
Query: 61 DVDEFM 66
D +EF+
Sbjct: 63 DFEEFL 68
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
+ R F+ D+NGDG++S+SEL E + L ++ E +++ +D NGDG +D +E
Sbjct: 88 KELRDAFREFDTNGDGEISTSELREAMRKL-LGHQVGHRDIEEIIRDVDLNGDGRVDFEE 146
Query: 65 FM 66
F+
Sbjct: 147 FV 148
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
+ R+ F+ D + DG ++ +LG + +G + E + +Q++ N G +D D+
Sbjct: 11 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEM--ELIELSQQINMNLGGHVDFDD 68
Query: 65 FMDAVHDDSGGKPKE----DYLMDAFLIFDINKNGLISAMELRRVLINL 109
F++ + + + L DAF FD N +G IS ELR + L
Sbjct: 69 FVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKL 117
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
+ R F+ D+NGDG++S+SEL E + L ++ E +++ +D NGDG +D +E
Sbjct: 102 KELRDAFREFDTNGDGEISTSELREAMRKL-LGHQVGHRDIEEIIRDVDLNGDGRVDFEE 160
Query: 65 FM 66
F+
Sbjct: 161 FV 162
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E + R+ F+ D + DG ++ +LG + +G + E + +Q++ N G +D
Sbjct: 22 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEM--ELIELSQQINMNLGGHVD 79
Query: 62 VDEFMDAVHDDSGGKPKE----DYLMDAFLIFDINKNGLISAMELRRVLINL 109
D+F++ + + + L DAF FD N +G IS ELR + L
Sbjct: 80 FDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKL 131
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ R+ FKV D +G+G +S ELG + LG + E E +++++D +GDG +D +EF
Sbjct: 37 EIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEV--ELEVIIQRLDMDGDGQVDFEEF 94
Query: 66 M 66
+
Sbjct: 95 V 95
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 9 QIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMDA 68
++F D DG + + +LG+V CLG + N A G +M G+ + +EF+ A
Sbjct: 16 ELFAFWDGR-DGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKM---GEKSLPFEEFLPA 71
Query: 69 VHD--DSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
D DY M+AF FD G IS ELR VL LG ++ + ED +I
Sbjct: 72 YEGLMDCEQGTFADY-MEAFKTFDREGQGFISGAELRHVLTALG-ERLSDEDVDEII 126
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLG 35
+ + + FK D G G +S +EL VL LG
Sbjct: 84 ADYMEAFKTFDREGQGFISGAELRHVLTALG 114
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVD 63
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYE 61
Query: 64 EFM 66
EF+
Sbjct: 62 EFV 64
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 79 EDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMI 47
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal
Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal
Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe
Bound With Er Alpha Peptide
Length = 67
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVD 63
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYE 58
Query: 64 EFM 66
EF+
Sbjct: 59 EFV 61
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 79 EDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMI 44
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From
Calmodulin To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVD 63
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYE 62
Query: 64 EFM 66
EF+
Sbjct: 63 EFV 65
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 79 EDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMI 48
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin And 1mm Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin
Length = 74
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVD 63
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +
Sbjct: 8 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYE 65
Query: 64 EFM 66
EF+
Sbjct: 66 EFV 68
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 79 EDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 8 EEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMI 51
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 79 EDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
E+ L++AF +FD + NGLISA ELR V+ NLG +K T ++ MI
Sbjct: 7 EEELIEAFKVFDRDGNGLISAAELRHVMTNLG-EKLTDDEVDEMI 50
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 9 QIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFM 66
+ FKV D +G+G +S++EL V+ LG ++ E + M+++ D +GDG I+ +EF+
Sbjct: 12 EAFKVFDRDGNGLISAAELRHVMTNLGEKLTD--DEVDEMIREADIDGDGHINYEEFV 67
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With
Pyrophosphate
Length = 67
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVD 63
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYE 61
Query: 64 EFM 66
EF+
Sbjct: 62 EFV 64
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 79 EDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMI 47
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin
Carboxy-Terminal Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVD 63
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +
Sbjct: 7 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYE 64
Query: 64 EFM 66
EF+
Sbjct: 65 EFV 67
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 79 EDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
E+ + +AF +FD + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 7 EEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMI 50
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 8 RQIFKVMD--SNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+++F++ D DG + + ++G+V CLG + N A G +M G+ + +EF
Sbjct: 13 KEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVFAVGGTHKM---GEKSLPFEEF 69
Query: 66 MDAVHD--DSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
+ A D DY M+AF FD G IS ELR VL LG
Sbjct: 70 LPAYEGLMDCEQGTYADY-MEAFKTFDREGQGFISGAELRHVLSGLG 115
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 9 QIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMDA 68
++F D DG + + +LG+V CLG + N A G +M G+ + +EF+ A
Sbjct: 14 ELFDFWDGR-DGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKM---GEKSLPFEEFLPA 69
Query: 69 VHD--DSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
D DY M+AF FD G IS ELR VL LG ++ + ED +I
Sbjct: 70 YEGLMDCEQGTFADY-MEAFKTFDREGQGFISGAELRHVLTALG-ERLSDEDVDEII 124
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLG 35
+ + + FK D G G +S +EL VL LG
Sbjct: 82 ADYMEAFKTFDREGQGFISGAELRHVLTALG 112
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 8 RQIFKVMD--SNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ +F++ D DG + + +LG+V CLG + N A G +M G+ + +EF
Sbjct: 9 KDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKM---GEKSLPFEEF 65
Query: 66 MDAVHD--DSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
+ A D DY M+AF FD G IS ELR VL LG ++ + ED +I
Sbjct: 66 LPAYEGLMDCEQGTFADY-MEAFKTFDREGQGFISGAELRHVLTALG-ERLSDEDVDEII 123
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLG 35
+ + + FK D G G +S +EL VL LG
Sbjct: 81 ADYMEAFKTFDREGQGFISGAELRHVLTALG 111
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 8 RQIFKVMD--SNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+++F++ D DG + + ++G+V CLG + N A G +M G+ + +EF
Sbjct: 12 KEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVFAVGGTHKM---GEKSLPFEEF 68
Query: 66 MDAVHD--DSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
+ A D DY M+AF FD G IS ELR VL LG
Sbjct: 69 LPAYEGLMDCEQGTYADY-MEAFKTFDREGQGFISGAELRHVLSGLG 114
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 9 QIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMDA 68
++F D DG + + +LG+V CLG + N A G +M G+ + +EF+ A
Sbjct: 13 ELFDFWDGR-DGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKM---GEKSLPFEEFLPA 68
Query: 69 VHD--DSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
D DY M+AF FD G IS ELR VL LG ++ + ED +I
Sbjct: 69 YEGLMDCEQGTFADY-MEAFKTFDREGQGFISGAELRHVLTALG-ERLSDEDVDEII 123
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLG 35
+ + + FK D G G +S +EL VL LG
Sbjct: 81 ADYMEAFKTFDREGQGFISGAELRHVLTALG 111
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 9 QIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMDA 68
++F D DG + + +LG+V CLG + N A G +M G+ + +EF+ A
Sbjct: 16 ELFDFWDGR-DGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKM---GEKSLPFEEFLPA 71
Query: 69 VHD--DSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
D DY M+AF FD G IS ELR VL LG ++ + ED +I
Sbjct: 72 YEGLMDCEQGTFADY-MEAFKTFDREGQGFISGAELRHVLTALG-ERLSDEDVDEII 126
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLG 35
+ + + FK D G G +S +EL VL LG
Sbjct: 84 ADYMEAFKTFDREGQGFISGAELRHVLTALG 114
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 8 RQIFKVMD--SNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ +F++ D DG + + +LG+V CLG + N A G +M G+ + +EF
Sbjct: 12 KDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKM---GEKSLPFEEF 68
Query: 66 MDAVHD--DSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
+ A D DY M+AF FD G IS ELR VL LG ++ + ED +I
Sbjct: 69 LPAYEGLMDCEQGTFADY-MEAFKTFDREGQGFISGAELRHVLTALG-ERLSDEDVDEII 126
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLG 35
+ + + FK D G G +S +EL VL LG
Sbjct: 84 ADYMEAFKTFDREGQGFISGAELRHVLTALG 114
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 42.4 bits (98), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E+SS ++ K S G+++ E + + +++ A+ + + D N DG +D
Sbjct: 26 ELSSWYQSFLKECPS---GRITRQEF-QTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 81
Query: 62 VDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINL 109
E++ A+H S GK + L AF ++D++ NG IS E+ ++ +
Sbjct: 82 FKEYVIALHMTSAGKTNQK-LEWAFSLYDVDGNGTISKNEVLEIVTAI 128
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 42.4 bits (98), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E+SS ++ K S G+++ E + + +++ A+ + + D N DG +D
Sbjct: 26 ELSSWYQSFLKECPS---GRITRQEF-QTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 81
Query: 62 VDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINL 109
E++ A+H S GK + L AF ++D++ NG IS E+ ++ +
Sbjct: 82 FKEYVIALHMTSAGKTNQK-LEWAFSLYDVDGNGTISKNEVLEIVTAI 128
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 42.4 bits (98), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E+SS ++ K S G+++ E + + +++ A+ + + D N DG +D
Sbjct: 27 ELSSWYQSFLKECPS---GRITRQEF-QTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 82
Query: 62 VDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINL 109
E++ A+H S GK + L AF ++D++ NG IS E+ ++ +
Sbjct: 83 FKEYVIALHMTSAGKTNQK-LEWAFSLYDVDGNGTISKNEVLEIVTAI 129
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E+SS ++ K S G+++ E + + +++ A+ + + D N DG +D
Sbjct: 26 ELSSWYQSFLKECPS---GRITRQEF-QTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 81
Query: 62 VDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINL 109
E++ A+H S GK + L AF ++D++ NG IS E+ ++ +
Sbjct: 82 FKEYVIALHMTSAGKTNQK-LEWAFSLYDVDGNGTISKNEVLEIVTAI 128
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATK-EAEGMLKQMDYNGDGFI 60
E+ ++F+ F + D++G G +S+ ELG V+ LG N TK E + ++ ++D +G G I
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG---QNPTKCELDAIICEVDEDGSGTI 73
Query: 61 DVDEFM 66
D +EF+
Sbjct: 74 DFEEFL 79
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEA-EGMLKQMDYNGDGFI 60
E+ ++F+ F + D++G G +S+ LG V+ LG N TKE + +++++D +G G I
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKALGTVMRMLG---QNPTKEELDAIIEEVDEDGSGTI 73
Query: 61 DVDEFM 66
D +EF+
Sbjct: 74 DFEEFL 79
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVD 63
+ R+ F+V D +G+G +S++EL V+ LG ++ +E + M+++ D +GDG ++ +
Sbjct: 28 EEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYE 85
Query: 64 EFM 66
EF+
Sbjct: 86 EFV 88
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 79 EDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
E+ + +AF + D + NG ISA ELR V+ NLG +K T E+ MI
Sbjct: 28 EEEIREAFRVEDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMI 71
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKS---NATKEAEG-MLKQMDYNGD 57
+V ++ FK +D+NGDG +++ EL ++ L K+ + KEA ++K D N D
Sbjct: 4 KVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSD 63
Query: 58 GFIDVDEFMDA 68
G I +EF++A
Sbjct: 64 GKISKEEFLNA 74
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 9 QIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMDA 68
++F D DG + + +LG+V CLG + N A G +M G+ + +EF+ A
Sbjct: 16 ELFDFWDGR-DGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKM---GEKSLPFEEFLPA 71
Query: 69 VHD--DSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
D DY M+AF FD G IS ELR VL LG
Sbjct: 72 YEGLMDCEQGTFADY-MEAFKTFDREGQGFISGAELRHVLSGLG 114
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 8 RQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNAT-KEAEGMLKQMDYNGDGFIDVDEFM 66
+++FK +D++ G + EL VL D + T E + LK D +GDG I +DEF
Sbjct: 45 KKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFE 104
Query: 67 DAVHD 71
VH+
Sbjct: 105 TLVHE 109
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E+SS ++ K S G+++ E + + +++ A+ + + D N DG +D
Sbjct: 26 ELSSWYQSFLKECPS---GRITRQEF-QTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 81
Query: 62 VDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINL 109
+++ A+H S GK + L AF ++D++ NG IS E+ ++ +
Sbjct: 82 FKQYVIALHMTSAGKTNQK-LEWAFSLYDVDGNGTISKNEVLEIVTAI 128
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E+SS ++ K S G+++ E + + +++ A+ + + D N DG +D
Sbjct: 26 ELSSWYQSFLKECPS---GRITRQEF-QTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 81
Query: 62 VDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINL 109
+++ A+H S GK + L AF ++D++ NG IS E+ ++ +
Sbjct: 82 FKQYVIALHMTSAGKTNQK-LEWAFSLYDVDGNGTISKNEVLEIVTAI 128
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 11 FKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMDAVH 70
FKV D+NGDG + E ++ +G ++ E E +K+ D +G+G ID+ EFMD +
Sbjct: 14 FKVFDANGDGVIDFDEFKFIMQKVG-EEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK 72
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 11 FKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMDAVH 70
FK+ D +G GK+S+ EL ++ D S +E E +++Q+D N DG +D +EF++ +
Sbjct: 423 FKMFDKDGSGKISTKELFKLFS--QADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQ 480
Query: 71 D 71
+
Sbjct: 481 N 481
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 15/116 (12%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSEL----GEVLICLGCDKSNATKEAEG---------MLK 50
+ Q +IF+ +D+N DG L EL E + G D SN+ + EG ++
Sbjct: 330 TKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVD-SNSLIQNEGSTIEDQIDSLMP 388
Query: 51 QMDYNGDGFIDVDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVL 106
+D +G G I+ EF+ + D + +E + AF +FD + +G IS EL ++
Sbjct: 389 LLDMDGSGSIEYSEFIASAIDRTILLSRER-MERAFKMFDKDGSGKISTKELFKLF 443
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 5/59 (8%)
Query: 11 FKVMDSNGDGKLSSSELGEVLICLGCDKSNATK----EAEGMLKQMDYNGDGFIDVDEF 65
F+V D + DG+++++EL VL G + N T+ + + M++++D NGDG ID EF
Sbjct: 131 FRVFDVDNDGEITTAELAHVLFN-GNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEF 188
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNA--TKEAEGMLKQMDYNGDGFIDV 62
+ + F +D G G ++ +L + G ++S + +L Q+D +G G ID
Sbjct: 55 QKLKAAFLHLDEEGKGNITKLQLRK-----GLERSGLMLPPNFDLLLDQIDSDGSGNIDY 109
Query: 63 DEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLIN 108
EF+ A D K Y AF +FD++ +G I+ EL VL N
Sbjct: 110 TEFLAAAIDRRQLSKKLIYC--AFRVFDVDNDGEITTAELAHVLFN 153
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 7 FRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFM 66
F++ F + D +GDG ++ EL V+ L D++ +E + M+ ++D +G+G I+ DEF+
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSL--DQNPTEEELQDMISEVDADGNGTIEFDEFL 69
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 7 FRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFM 66
F++ F + D +GDG ++ EL V+ L D++ +E + M+ ++D +G+G I+ DEF+
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSL--DQNPTEEELQDMISEVDADGNGTIEFDEFL 69
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ + F V+D +G G ++ +L + L D + +L Q+D +G G ID EF
Sbjct: 53 KLKSTFLVLDEDGKGYITKEQLKK---GLEKDGLKLPYNFDLLLDQIDSDGSGKIDYTEF 109
Query: 66 MDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLIN 108
+ A D K Y AF +FD++ +G I+ EL +L N
Sbjct: 110 IAAALDRKQLSKKLIYC--AFRVFDVDNDGEITTAELAHILYN 150
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 11 FKVMDSNGDGKLSSSELGEVLICLGCDKSNATK----EAEGMLKQMDYNGDGFIDVDEF 65
F+V D + DG+++++EL +L G K N T+ + M++ +D N DG ID EF
Sbjct: 128 FRVFDVDNDGEITTAELAHILYN-GNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEF 185
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E + + F + D N DG L EL + LG + +E ++ + D G +
Sbjct: 20 EQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFEL--PKREILDLIDEYDSEGRHLMK 77
Query: 62 VDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRR 121
D+F + + + D + AF +FD + G IS LRRV LG + T E+ R
Sbjct: 78 YDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELG-ETLTDEELRA 136
Query: 122 MI 123
MI
Sbjct: 137 MI 138
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ ++ F++ D + GK+S L V LG ++ +E M+++ D +GDG I+ +EF
Sbjct: 97 EIKRAFQLFDDDHTGKISIKNLRRVAKELG--ETLTDEELRAMIEEFDLDGDGEINENEF 154
Query: 66 M 66
+
Sbjct: 155 I 155
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 11 FKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFM 66
F++ D N DG + ELGE+L G + ++ E ++K D N DG ID DEF+
Sbjct: 16 FRIFDKNADGFIDIEELGEILRATG--EHVIEEDIEDLMKDSDKNNDGRIDFDEFL 69
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 79 EDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
E+ + +AF +FD + NG ISA +LR V+ NLG +K T E+ MI
Sbjct: 6 EEEIREAFRVFDKDGNGYISAADLRHVMTNLG-EKLTDEEVDEMI 49
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVD 63
+ R+ F+V D +G+G +S+++L V+ LG ++ +E + M+++ D +GDG ++ +
Sbjct: 6 EEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTD--EEVDEMIREADIDGDGQVNYE 63
Query: 64 EFM 66
+F+
Sbjct: 64 DFV 66
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 15 DSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMDAVHD 71
D N DG++++ E L LG K+ A + Q+D NG+G + +DE + AV D
Sbjct: 112 DKNADGQINADEFAAWLTALGMSKAEAAE----AFNQVDTNGNGELSLDELLTAVRD 164
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 20 GKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMDAVHDDSGGKPKE 79
G+++ + + D ++ A+ + + D N DG +D E++ A+H + GK +
Sbjct: 49 GRITQQQFQSIYAKFFPD-TDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHXTTAGKTNQ 107
Query: 80 DYLMDAFLIFDINKNGLISAMELRRVL 106
L AF ++D++ NG IS E+ ++
Sbjct: 108 K-LEWAFSLYDVDGNGTISKNEVLEIV 133
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 8 RQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMD 67
+ +F+ DSN DG L E L K+N ++ E D +G+G I +E ++
Sbjct: 74 QHVFRSFDSNLDGTLDFKEYVIALHXTTAGKTN--QKLEWAFSLYDVDGNGTISKNEVLE 131
Query: 68 AV 69
V
Sbjct: 132 IV 133
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 11 FKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMDAVH 70
FK +D + G LS E + + + ++ D +G+G +D EF++ V
Sbjct: 26 FKKLDLDNSGSLSVEEF------MSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVS 79
Query: 71 DDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVL 106
S KE L AF I+D++K+G IS EL +VL
Sbjct: 80 QFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVL 115
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 11 FKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMDAVH 70
FK +D + G LS E + + + ++ D +G+G +D EF++ V
Sbjct: 27 FKKLDLDNSGSLSVEEF------MSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVS 80
Query: 71 DDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVL 106
S KE L AF I+D++K+G IS EL +VL
Sbjct: 81 QFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVL 116
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 8 RQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAE--GMLKQMDYNGDGFIDVDEF 65
++ F +D++ G+++ EL L +G + KE+E + + D + G ID EF
Sbjct: 30 KEXFNXIDADKSGQITFEELKAGLKRVGAN----LKESEILDLXQAADVDNSGTIDYKEF 85
Query: 66 MDA-VHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRR 121
+ A +H + +ED+L AF FD + +G I+ EL++ G + +E+ R
Sbjct: 86 IAATLHLNK--IEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVRIEELXR 140
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 11 FKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMDAVH 70
FK +D + G LS E + + + ++ D +G+G +D EF++ V
Sbjct: 12 FKKLDLDNSGSLSVEEF------MSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVS 65
Query: 71 DDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVL 106
S KE L AF I+D++K+G IS EL +VL
Sbjct: 66 QFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVL 101
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 11 FKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMDAVH 70
FK +D + G LS E + + + ++ D +G+G +D EF++ V
Sbjct: 13 FKKLDLDNSGSLSVEEF------MSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVS 66
Query: 71 DDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVL 106
S KE L AF I+D++K+G IS EL +VL
Sbjct: 67 QFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVL 102
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 7 FRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNA-TKEAEGMLKQMDYNGDGFIDVDEF 65
F++ F V+D N DG + +L E +G + N +E + M+K+ G I+ F
Sbjct: 27 FKEAFTVIDQNADGIIDKDDLRETFAAMG--RLNVKNEELDAMIKE----ASGPINFTVF 80
Query: 66 MDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRM 122
+ + G ED +M AF + D + G I L L+ G + T E+ + M
Sbjct: 81 LTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEE-LLTTGGGRFTPEEIKNM 136
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 7 FRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNA-TKEAEGMLKQMDYNGDGFIDVDEF 65
F++ F V+D N DG + +L E +G + N +E + M+K+ G I+ F
Sbjct: 9 FKEAFTVIDQNADGIIDKDDLRETFAAMG--RLNVKNEELDAMIKE----ASGPINFTVF 62
Query: 66 MDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRM 122
+ + G ED +M AF + D + G I L L+ G + T E+ + M
Sbjct: 63 LTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEE-LLTTGGGRFTPEEIKNM 118
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 3 VSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDV 62
+ + R+ F++ D G+G +S+ + E+L L D++ ++++ + M+ ++D +G G +D
Sbjct: 1 MQQELREAFRLYDKEGNGYISTDVMREILAEL--DETLSSEDLDAMIDEIDADGSGTVDF 58
Query: 63 DEFM 66
+EFM
Sbjct: 59 EEFM 62
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 6/60 (10%)
Query: 8 RQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMD 67
+ ++K+MD +GDGKL+ E+ G +K AE ++K D NGDG+I ++EF++
Sbjct: 8 KVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKV-----AEQVMKA-DANGDGYITLEEFLE 61
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
++ + R+ F++ D G+G +S+ + E+L L D++ ++++ + M+ ++D +G G +D
Sbjct: 88 QMQQELREAFRLYDKEGNGYISTDVMREILAEL--DETLSSEDLDAMIDEIDADGSGTVD 145
Query: 62 VDEFM 66
+EFM
Sbjct: 146 FEEFM 150
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 16 SNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF----MDAVHD 71
G G++S+ ++G +L LG ++ +T ++ + D G+G ID D F + +
Sbjct: 25 PEGSGRVSTDQIGIILEVLGIQQTKSTIRQ--LIDEFDPFGNGDIDFDSFKIIGARFLGE 82
Query: 72 DSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
+ + + L +AF ++D NG IS +R +L L + + ED MI
Sbjct: 83 EVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAEL-DETLSSEDLDAMI 133
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 6/60 (10%)
Query: 8 RQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMD 67
+ ++K+MD +GDGKL+ E+ G +K AE ++K D NGDG+I ++EF++
Sbjct: 78 KVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKV-----AEQVMK-ADANGDGYITLEEFLE 131
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 10/111 (9%)
Query: 10 IFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGM---LKQMDYNGDGFIDVDEFM 66
+FK +D NGDG +S E+ K A K + + K +D +G+G ID +EF
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAF-----VSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFA 59
Query: 67 DAVHDDSGGKPKEDY--LMDAFLIFDINKNGLISAMELRRVLINLGCDKCT 115
G +D L + + D++ +G ++ E+ G +K
Sbjct: 60 KFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVA 110
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 6/60 (10%)
Query: 8 RQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMD 67
+ ++K+MD +GDGKL+ E+ G +K AE ++K D NGDG+I ++EF++
Sbjct: 78 KVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKV-----AEQVMK-ADANGDGYITLEEFLE 131
Score = 27.3 bits (59), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 10/111 (9%)
Query: 10 IFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGM---LKQMDYNGDGFIDVDEFM 66
+FK +D NGDG +S E+ K A K + + K +D +G+G ID +EF
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAF-----VSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFA 59
Query: 67 DAVHDDSGGKPKEDY--LMDAFLIFDINKNGLISAMELRRVLINLGCDKCT 115
G +D L + + D++ +G ++ E+ G +K
Sbjct: 60 KFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVA 110
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEV---LICLGCDKSNATKEAEGMLKQMDYNGDG 58
E+ ++ FK S G L+ SE ++ G + + AE + D + +G
Sbjct: 26 ELQQWYKGFFKDCPS---GHLNKSEFQKIYKQFFPFG----DPSAFAEYVFNVFDADKNG 78
Query: 59 FIDVDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVL 106
+ID EF+ A+ S G+ D L+ AF ++D++ NGLIS E+ R++
Sbjct: 79 YIDFKEFICALSVTSRGE-LNDKLIWAFQLYDLDNNGLISYDEMLRIV 125
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Query: 7 FRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFM 66
+++FK++D++ G ++ EL + L +G + + E + ++ D + G ID EF+
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMES--EIKDLMDAADIDKSGTIDYGEFI 69
Query: 67 DA-VHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
A VH + +E+ L+ AF FD + +G I+ E+++ + G D ++D + I
Sbjct: 70 AATVHLNK--LEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEI 125
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 10 IFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFM 66
++K+MD++GDGKL+ E+ G +K + + D NGDG+I ++EF+
Sbjct: 80 LYKLMDADGDGKLTKEEVTTFFKKFGYEK------VVDQIMKADANGDGYITLEEFL 130
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 45 AEGMLKQMDYNGDGFIDVDEFMDAVHDDSGGKP--KEDYLMDAFLIFDINKNGLISAMEL 102
AE + KQ+D NGDG + +E V S +P E L F DI+ NG I E
Sbjct: 2 AEALFKQLDANGDGSVSYEEVKAFV---SSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEF 58
Query: 103 RR 104
+
Sbjct: 59 TK 60
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 10 IFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+FK +D+NGDG +S E+ + K+ + + K +D +G+G ID+ EF
Sbjct: 5 LFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQL--IFKAIDIDGNGEIDLAEF 58
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E + R+ F + D++G G + + EL + LG + +E + M+ ++D +G G ID
Sbjct: 27 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKK--EEIKKMISEIDKDGSGTID 84
Query: 62 VDEFM 66
+EF+
Sbjct: 85 FEEFL 89
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATK-EAEGMLKQMDYNGDGFIDV 62
+SQ + IF+ +D++ G L EL L D T+ E + ++ D +GDG I
Sbjct: 40 ASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGA 99
Query: 63 DEFMDAVH 70
DEF + VH
Sbjct: 100 DEFQEMVH 107
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLG----CDKSNATKEAEGML-KQMDYNG 56
+V + R FK+ D +G+G + EL ++ + C+++ +E M+ ++D NG
Sbjct: 85 KVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDING 144
Query: 57 DGFIDVDEFMDAVHDD 72
DG + ++EFM+ V D
Sbjct: 145 DGELSLEEFMEGVQKD 160
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 7/117 (5%)
Query: 12 KVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMDAVHD 71
K M G+L+ E + S A K E M + D+N DG+ID E++ A+
Sbjct: 22 KFMTECPSGQLTLYEFKQFFGLKNLSPS-ANKYVEQMFETFDFNKDGYIDFMEYVAALSL 80
Query: 72 DSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVL-----INLGCDKCTLEDCRRMI 123
GK + L F ++D++ NG I EL ++ IN + T E+ M+
Sbjct: 81 VLKGKVDQK-LRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMV 136
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 2 EVSSQFRQIFKVMDSNG-DGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFI 60
E ++F+ F + + DG +S+ ELG+V+ LG ++ +E + M+ ++D +G G +
Sbjct: 15 EQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLG--QNPTPEELQEMIDEVDEDGSGTV 72
Query: 61 DVDEFM 66
D DEF+
Sbjct: 73 DFDEFL 78
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 2 EVSSQFRQIFKVMDSNG-DGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFI 60
E ++F+ F + + DG +S+ ELG+V+ LG ++ +E + M+ ++D +G G +
Sbjct: 15 EQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLG--QNPTPEELQEMIDEVDEDGSGTV 72
Query: 61 DVDEFM 66
D DEF+
Sbjct: 73 DFDEFL 78
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 8 RQIFKVMDSNGDGKLSSSELGEVLICLGCDKSN-ATKEAEGMLKQMDYNGDGFIDVDEF 65
+++F ++D + DG + ELG +L D + + KE + ++ D +GDG I V+EF
Sbjct: 44 KKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 102
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 37.0 bits (84), Expect = 0.004, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ + F+ DS+ GK+SS+EL + D ++ + +L ++D N DG +D DEF
Sbjct: 419 RLERAFRXFDSDNSGKISSTELATIFGVSDVD----SETWKSVLSEVDKNNDGEVDFDEF 474
Score = 28.1 bits (61), Expect = 2.0, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 14/93 (15%)
Query: 40 NATKEAEGMLKQMDYNGDGFIDVDEFMDAVHDDSGGKPKEDYLMDAFLI----------F 89
+ TKE + + D NGDG +D E ++ + K ++ +DA +
Sbjct: 332 DETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDAV 391
Query: 90 DINKNGLISAMELRRVLINLGCDKCTLEDCRRM 122
D +KNG I E + + D+ TL R+
Sbjct: 392 DFDKNGYIEYSE----FVTVAXDRKTLLSRERL 420
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 2 EVSSQFRQIFKVMDSNG-DGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFI 60
E ++F+ F + DG +S+ ELG+V+ LG ++ +E + M+ ++D +G G +
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG--QNPTPEELQEMIDEVDEDGSGTV 72
Query: 61 DVDEFM 66
D DEF+
Sbjct: 73 DFDEFL 78
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ + F++ DS+ GK+SS+EL + D ++ + +L ++D N DG +D DEF
Sbjct: 419 RLERAFRMFDSDNSGKISSTELATIFGVSDVD----SETWKSVLSEVDKNNDGEVDFDEF 474
Score = 30.8 bits (68), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 20/134 (14%)
Query: 1 MEVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCD--KSNATKEAEGMLKQMDYNGDG 58
++V S I + G KL+ + L+ +G + TKE + +MD NGDG
Sbjct: 295 VDVPSLDNAILNIRQFQGTQKLAQA----ALLYMGSKLTSQDETKELTAIFHKMDKNGDG 350
Query: 59 FIDVDEFMDAVHDDSGGKPKEDYLMDAFLI----------FDINKNGLISAMELRRVLIN 108
+D E ++ + K ++ ++DA + D +KNG I E +
Sbjct: 351 QLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSE----FVT 406
Query: 109 LGCDKCTLEDCRRM 122
+ D+ TL R+
Sbjct: 407 VAMDRKTLLSRERL 420
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 2 EVSSQFRQIFKVMDSNG-DGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFI 60
E ++F+ F + DG +S+ ELG+V+ LG ++ +E + M+ ++D +G G +
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG--QNPTPEELQEMIDEVDEDGSGTV 72
Query: 61 DVDEFM 66
D DEF+
Sbjct: 73 DFDEFL 78
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 19 DGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFM 66
DG +S+ ELG+V+ LG ++ +E + M+ ++D +G G +D DEF+
Sbjct: 33 DGSISTKELGKVMRMLG--QNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ + F++ DS+ GK+SS+EL + D ++ + +L ++D N DG +D DEF
Sbjct: 442 RLERAFRMFDSDNSGKISSTELATIFGVSDVD----SETWKSVLSEVDKNNDGEVDFDEF 497
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 20/134 (14%)
Query: 1 MEVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCD--KSNATKEAEGMLKQMDYNGDG 58
++V S I + G KL+ + L+ +G + TKE + +MD NGDG
Sbjct: 318 VDVPSLDNAILNIRQFQGTQKLAQA----ALLYMGSKLTSQDETKELTAIFHKMDKNGDG 373
Query: 59 FIDVDEFMDAVHDDSGGKPKEDYLMDAFLI----------FDINKNGLISAMELRRVLIN 108
+D E ++ + K ++ ++DA + D +KNG I E +
Sbjct: 374 QLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSE----FVT 429
Query: 109 LGCDKCTLEDCRRM 122
+ D+ TL R+
Sbjct: 430 VAMDRKTLLSRERL 443
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 20/115 (17%)
Query: 8 RQIFKVMDSNGDGKLSSSELGEVLICLGCDKSN-----------ATKEAEGM-LKQMDYN 55
+ IF + D G G ++ LG+ L +G + +N + ++A + L Q+
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQIT-- 64
Query: 56 GDGFIDVDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
G I+V+E D+ K K + + AF +FD G +S +LR +L LG
Sbjct: 65 --GLIEVNE----KELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLG 113
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVD 63
+ F + F+V D GK+S +L +L LG ++A E + +LK ++ + +G ID
Sbjct: 82 TEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDA--EVDELLKGVEVDSNGEIDYK 139
Query: 64 EFMDAV 69
+F++ V
Sbjct: 140 KFIEDV 145
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ + F++ DS+ GK+SS+EL + D ++ + +L ++D N DG +D DEF
Sbjct: 443 RLERAFRMFDSDNSGKISSTELATIFGVSDVD----SETWKSVLSEVDKNNDGEVDFDEF 498
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 20/134 (14%)
Query: 1 MEVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCD--KSNATKEAEGMLKQMDYNGDG 58
++V S I + G KL+ + L+ +G + TKE + +MD NGDG
Sbjct: 319 VDVPSLDNAILNIRQFQGTQKLAQA----ALLYMGSKLTSQDETKELTAIFHKMDKNGDG 374
Query: 59 FIDVDEFMDAVHDDSGGKPKEDYLMDAFLI----------FDINKNGLISAMELRRVLIN 108
+D E ++ + K ++ ++DA + D +KNG I E +
Sbjct: 375 QLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSE----FVT 430
Query: 109 LGCDKCTLEDCRRM 122
+ D+ TL R+
Sbjct: 431 VAMDRKTLLSRERL 444
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 2 EVSSQFRQIFKVMDSNG-DGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFI 60
E ++F+ F + DG +S+ ELG+V+ LG ++ +E + M+ ++D +G G +
Sbjct: 15 EQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLG--QNPTPEELQEMIDEVDEDGSGTV 72
Query: 61 DVDEFM 66
D DEF+
Sbjct: 73 DFDEFL 78
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEA-EGMLKQMDYNGDGFI 60
E ++++ F++ D + D KL++ ELG V+ LG N TK+ ++K D + G
Sbjct: 11 EEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGA---NPTKQKISEIVKDYDKDNSGKF 67
Query: 61 DVDEFM 66
D + F+
Sbjct: 68 DQETFL 73
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 MEVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSN-ATKEAEGMLKQMDYNGDGF 59
M+ + +++F ++D + G + ELG +L D + + KE + ++ D +GDG
Sbjct: 1 MKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGK 60
Query: 60 IDVDEF 65
I V+EF
Sbjct: 61 IGVEEF 66
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 50/122 (40%), Gaps = 3/122 (2%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E + + F + D N DG L EL LG + +E ++ + D G
Sbjct: 20 EQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFEL--PKREILDLIDEYDSEGRHLXK 77
Query: 62 VDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRR 121
D+F + + D + AF +FD + G IS LRRV LG + T E+ R
Sbjct: 78 YDDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELG-ETLTDEELRA 136
Query: 122 MI 123
I
Sbjct: 137 XI 138
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ ++ F++ D + GK+S L V LG ++ +E +++ D +GDG I+ +EF
Sbjct: 97 EIKRAFQLFDDDHTGKISIKNLRRVAKELG--ETLTDEELRAXIEEFDLDGDGEINENEF 154
Query: 66 M 66
+
Sbjct: 155 I 155
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 8 RQIFKVMDSNGDGKLSSSELGEVLICLGCDKSN-ATKEAEGMLKQMDYNGDGFIDVDEF 65
+++F ++D + G + ELG +L D ++ + KE + ++ D +GDG I V+EF
Sbjct: 44 KKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEEF 102
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 37 DKSNATKEAEGMLKQMDYNGDGFIDVDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGL 96
D AT+ E M + D NGD ID E++ A++ G E L F I+D ++NG
Sbjct: 53 DNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTL-EHKLKWTFKIYDKDRNGC 111
Query: 97 ISAMEL 102
I EL
Sbjct: 112 IDRQEL 117
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 2 EVSSQFRQIFKVMDSNG-DGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFI 60
E ++F+ F + DG +S+ ELG+V+ LG ++ +E + M+ ++D +G G +
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLG--QNPTPEELQEMIDEVDEDGSGTV 72
Query: 61 DVDEFM 66
D DEF+
Sbjct: 73 DFDEFL 78
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E + R+ F + D++G G + EL LG + + + ++D G G +
Sbjct: 28 EQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKK--XISEIDKEGTGKXN 85
Query: 62 VDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
+F+ K ++ ++ AF +FD ++ G IS L+RV LG
Sbjct: 86 FGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG 134
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 8 RQIFKVMDSNGDGKLSSSELGEVLICLGCDKSN-ATKEAEGMLKQMDYNGDGFIDVDEF 65
+++F ++D + G + ELG +L D + + KE + ++ D +GDG I V+EF
Sbjct: 44 KKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 102
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 34.7 bits (78), Expect = 0.021, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E ++FR F D G + + LI +G + A E ++ +D N G +
Sbjct: 722 EQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEA--EFARIMSIVDPNRMGVVT 779
Query: 62 VDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVL 106
F+D + ++ D +M +F I +KN I+ ELRR L
Sbjct: 780 FQAFIDFMSRETADTDTADQVMASFKILAGDKN-YITVDELRREL 823
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 33.9 bits (76), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 2 EVSSQFRQIFKVMDSNG-DGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFI 60
E ++F+ F + DG +S+ ELG+V+ LG ++ +E + M+ ++D +G G +
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLG--QNPTPEELQEMIDEVDEDGSGTV 72
Query: 61 DVDEFM 66
D DE++
Sbjct: 73 DFDEWL 78
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I
Length = 81
Score = 33.9 bits (76), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 3 VSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDV 62
+ +F++ D N DG + EL +L G ++ + E ++K D N DG ID
Sbjct: 13 TEEELSDLFRMFDKNADGYIDLEELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDY 70
Query: 63 DEFMD 67
DEF++
Sbjct: 71 DEFLE 75
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 69 VHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
+ DDS GK +E+ L D F +FD N +G I EL+ +L G
Sbjct: 5 MKDDSKGKTEEE-LSDLFRMFDKNADGYIDLEELKIMLQATG 45
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 33.9 bits (76), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 2 EVSSQFRQIFKVMDSNG-DGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFI 60
E ++F+ F + DG +S+ ELG+V+ LG ++ +E + M+ ++D +G G +
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLG--QNPTPEELQEMIDEVDEDGSGTV 72
Query: 61 DVDEFM 66
D DE++
Sbjct: 73 DFDEWL 78
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 33.5 bits (75), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 8 RQIFKVMDSNGDGKLSSSELGEVLICLGCDKSN-ATKEAEGMLKQMDYNGDGFIDVDEF 65
+++F ++D + G + ELG +L D + + KE + ++ D +G G I+V+EF
Sbjct: 44 KKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSGKIEVEEF 102
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 33.5 bits (75), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNAT-KEAEGMLKQMDYNGDGFIDV 62
SSQ ++IF+++D++ G + EL L T E + L D++GDG I
Sbjct: 40 SSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGA 99
Query: 63 DEFMDAVH 70
+EF + V
Sbjct: 100 EEFQEMVQ 107
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 76
Score = 33.5 bits (75), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 3 VSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDV 62
+ +F++ D N DG + EL +L G ++ + E ++K D N DG ID
Sbjct: 8 TEEELSDLFRMFDKNADGYIDLEELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDY 65
Query: 63 DEFMD 67
DEF++
Sbjct: 66 DEFLE 70
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 70 HDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
DDS GK +E+ L D F +FD N +G I EL+ +L G
Sbjct: 1 KDDSKGKTEEE-LSDLFRMFDKNADGYIDLEELKIMLQATG 40
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 33.5 bits (75), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVD 63
+ +F++ D N DG + EL +L G ++ + E ++K D N DG ID D
Sbjct: 4 EEELSDLFRMFDKNADGYIDLEELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDYD 61
Query: 64 EFMD 67
EF++
Sbjct: 62 EFLE 65
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 33.5 bits (75), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 6/106 (5%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
+ ++ F ++D + DG + +L ++ LG + E MLK+ G ++
Sbjct: 16 QELKEAFTMIDQDRDGFIGMEDLKDMFSSLG--RVPPDDELNAMLKECP----GQLNFTA 69
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
F+ + G ED L +AF +FD + G I L+ +L N+G
Sbjct: 70 FLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMG 115
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 33.1 bits (74), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVD 63
+ +F++ D N DG + EL +L G ++ + E ++K D N DG ID D
Sbjct: 6 EEELSDLFRMFDKNADGYIDLEELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDYD 63
Query: 64 EFMD 67
EF++
Sbjct: 64 EFLE 67
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 33.1 bits (74), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 17/80 (21%), Positives = 37/80 (46%), Gaps = 10/80 (12%)
Query: 3 VSSQFRQIFKVMDSNGDGKLSSSELGEVLICLG----------CDKSNATKEAEGMLKQM 52
V + R F + D N DG ++ E+ +++ + + + + ++M
Sbjct: 90 VHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKM 149
Query: 53 DYNGDGFIDVDEFMDAVHDD 72
D N DG + +DEF+++ +D
Sbjct: 150 DKNKDGIVTLDEFLESXQED 169
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The
Cardiac Regulatory Protein Troponin C
Length = 72
Score = 33.1 bits (74), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVD 63
+ +F++ D N DG + EL +L G ++ + E ++K D N DG ID D
Sbjct: 5 EEELSDLFRMFDKNADGYIDLDELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDYD 62
Query: 64 EFMD 67
EF++
Sbjct: 63 EFLE 66
>pdb|2SCP|A Chain A, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|2SCP|B Chain B, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|1Q80|A Chain A, Solution Structure And Dynamics Of Nereis Sarcoplasmic
Calcium Binding Protein
Length = 174
Score = 33.1 bits (74), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 3 VSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDV 62
V F+ +D+N D +S E G LG DK+ A +D N DG + +
Sbjct: 92 VEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPAS----FDAIDTNNDGLLSL 147
Query: 63 DEFMDAVHD 71
+EF+ A D
Sbjct: 148 EEFVIAGSD 156
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 33.1 bits (74), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 8 RQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMD 67
R+ F+ DS+GDG+L S+E+ L+ G S T +A ++++ D G + D++++
Sbjct: 96 REGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQA--LMRKFDRQRRGSLGFDDYVE 153
>pdb|1WY9|A Chain A, Crystal Structure Of Microglia-Specific Protein, Iba1
Length = 147
Score = 33.1 bits (74), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 86 FLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
++ FD+N NG I M L+R+L LG K LE +R+I
Sbjct: 54 YMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLE-LKRLI 90
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 33.1 bits (74), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 8 RQIFKVMDSNGDGKLSSSELGEVLICLGCDKSN-ATKEAEGMLKQMDYNGDGFIDVDEF 65
+++F ++D + G + ELG +L D + + KE + ++ D +GDG I VDEF
Sbjct: 45 KKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEF 103
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 32.7 bits (73), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
+ ++ F ++D N DG + ++L E LG ++ KE MLK+ G ++
Sbjct: 2 QEMKEAFTMIDQNRDGFIDINDLKEEFSSLG--RTPDDKELTAMLKE----APGPLNFTM 55
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
F+ D G E+ + +AF +FD + ++ ++ +L N+G
Sbjct: 56 FLSIFSDKLSGTDSEETIRNAFGMFDEDATKKLNIEYIKDLLENMG 101
>pdb|1IJ5|A Chain A, Metal-Free Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
pdb|1IJ6|A Chain A, Ca2+-Bound Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
Length = 323
Score = 32.7 bits (73), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 50/119 (42%), Gaps = 23/119 (19%)
Query: 8 RQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQM------DYNGD-GFI 60
RQ+F +G GK S +L +VL A EG LK++ D G +I
Sbjct: 125 RQLFLSSAVSGSGKFSFQDLKQVLA------KYADTIPEGPLKKLFVMVENDTKGRMSYI 178
Query: 61 DVDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDC 119
+ AV +D L+ F D N NG +S E R + LG DK +++D
Sbjct: 179 T----LVAVANDLAA------LVADFRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDA 227
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 32.7 bits (73), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
S +++F+ D N DGKLS E EV L ++ +++D +G+G ++ DE
Sbjct: 1 SSAKRVFEKFDKNKDGKLSLDEFREV--ALAFSPYFTQEDIVKFFEEIDVDGNGELNADE 58
Query: 65 FMDAVH 70
F +
Sbjct: 59 FTSCIE 64
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 32.7 bits (73), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 10/80 (12%)
Query: 3 VSSQFRQIFKVMDSNGDGKLSSSELGEVLICL---------GCDKSNATKE-AEGMLKQM 52
V + F + D N DG ++ E+ +++ + K +A ++ E ++M
Sbjct: 136 VQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKM 195
Query: 53 DYNGDGFIDVDEFMDAVHDD 72
D N DG + +DEF+++ D
Sbjct: 196 DKNKDGVVTIDEFIESCQKD 215
Score = 26.2 bits (56), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 38 KSNATKEAEGMLKQMDYNGDGFIDVDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLI 97
+ ++T A + D + +G + ++F+ + G +E L AF ++DINK+G I
Sbjct: 97 QGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEK-LNWAFNLYDINKDGYI 155
Query: 98 SAMELRRVL 106
+ E+ ++
Sbjct: 156 TKEEMLDIM 164
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 32.7 bits (73), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 84 DAFLIFDINKNGLISAMELRRVLINLGCDKCTLE 117
+ ++ FD+N NG I M L+R+L LG K LE
Sbjct: 55 EKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLE 88
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 32.7 bits (73), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFID 61
E + ++ F + D+N G + EL + LG D E ++ + D G+G+I
Sbjct: 4 EQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKP--EILELMNEYDREGNGYIG 61
Query: 62 VDEFMD 67
D+F+D
Sbjct: 62 FDDFLD 67
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 82 LMDAFLIFDINKNGLISAMELRRVLINLGCD 112
+ +AF +FD NK G I EL+ + LG D
Sbjct: 9 IKEAFDLFDTNKTGSIDYHELKVAMRALGFD 39
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 32.7 bits (73), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 17/80 (21%), Positives = 37/80 (46%), Gaps = 10/80 (12%)
Query: 3 VSSQFRQIFKVMDSNGDGKLSSSELGEVLICLG----------CDKSNATKEAEGMLKQM 52
V + R F + D N DG ++ E+ +++ + + + + ++M
Sbjct: 123 VHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKM 182
Query: 53 DYNGDGFIDVDEFMDAVHDD 72
D N DG + +DEF+++ +D
Sbjct: 183 DKNKDGIVTLDEFLESCQED 202
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 32.7 bits (73), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLG--CDKSNATKEAEGMLKQMDYNGDGFIDVD 63
+F++ F+++D + DG +S +++ LG C E L M G I+
Sbjct: 58 EFKEAFQLIDQDKDGFISKNDIRATFDSLGRLC--------TEQELDSMVAEAPGPINFT 109
Query: 64 EFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
F+ D G +ED +++AF +FD +G L+R L G
Sbjct: 110 MFLTIFGDRIAGTDEEDVIVNAFNLFD-EGDGKCKEETLKRSLTTWG 155
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 32.3 bits (72), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 17/80 (21%), Positives = 37/80 (46%), Gaps = 10/80 (12%)
Query: 3 VSSQFRQIFKVMDSNGDGKLSSSELGEVLICLG----------CDKSNATKEAEGMLKQM 52
V + R F + D N DG ++ E+ +++ + + + + ++M
Sbjct: 87 VHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKM 146
Query: 53 DYNGDGFIDVDEFMDAVHDD 72
D N DG + +DEF+++ +D
Sbjct: 147 DKNKDGIVTLDEFLESCQED 166
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 73 SGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
SG + + ++ AF +FD + +G I+ +LRRV LG + T E+ + MI
Sbjct: 2 SGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELG-ENLTEEELQEMI 51
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 9 QIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEA-EGMLKQMDYNGDGFIDVDEFM 66
+ F++ D + G ++ +L V LG N T+E + M+ + D N D ID DEF+
Sbjct: 13 KAFRLFDDDNSGTITIKDLRRVAKELG---ENLTEEELQEMIAEADRNDDNEIDEDEFI 68
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 84 DAFLIFDINKNGLISAMELRRVLINLGCDKCTLE 117
+ ++ FD+N NG I M L+R+L LG K LE
Sbjct: 36 EKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLE 69
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/80 (21%), Positives = 37/80 (46%), Gaps = 10/80 (12%)
Query: 3 VSSQFRQIFKVMDSNGDGKLSSSELGEVLICLG----------CDKSNATKEAEGMLKQM 52
V + R F + D N DG ++ E+ +++ + + + + ++M
Sbjct: 87 VHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQKM 146
Query: 53 DYNGDGFIDVDEFMDAVHDD 72
D N DG + +DEF+++ +D
Sbjct: 147 DKNKDGIVTLDEFLESCQED 166
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
+ ++ F ++D N DG + ++L E+ LG ++ KE MLK+ G ++
Sbjct: 23 QEMKEAFTMIDQNRDGFIDINDLKEMFSSLG--RTPDDKELTAMLKE----APGPLNFTM 76
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
F+ D G E+ + +AF +FD ++ ++ +L N+G
Sbjct: 77 FLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMG 122
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
+ ++ F ++D N DG + ++L E+ LG ++ KE MLK+ G ++
Sbjct: 23 QEMKEAFTMIDQNRDGFIDINDLKEMFSSLG--RTPDDKELTAMLKE----APGPLNFTM 76
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
F+ D G E+ + +AF +FD ++ ++ +L N+G
Sbjct: 77 FLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMG 122
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 2 EVSSQFRQIFKVMDSNG-DGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFI 60
E ++F+ F + DG +S+ ELG+V LG ++ +E + + ++D +G G +
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGCISTKELGKVXRXLG--QNPTPEELQEXIDEVDEDGSGTV 72
Query: 61 DVDEFM 66
D DEF+
Sbjct: 73 DFDEFL 78
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ ++ F ++D N DG + ++L E+ LG ++ KE MLK+ G ++ F
Sbjct: 20 EMKEAFTMIDQNRDGFIDINDLKEMFSSLG--RTPDDKELTAMLKE----APGPLNFTMF 73
Query: 66 MDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
+ D G E+ + +AF +FD ++ ++ +L N+G
Sbjct: 74 LSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMG 118
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 10/65 (15%)
Query: 11 FKVMDSNGDGKLSSSELGEV----------LICLGCDKSNATKEAEGMLKQMDYNGDGFI 60
F++ D N DG ++ E+ + ++ L D++ + + K MD N DG+I
Sbjct: 105 FELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYI 164
Query: 61 DVDEF 65
+DEF
Sbjct: 165 TLDEF 169
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 45 AEGMLKQMDYNGDGFIDVDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRR 104
A + D + +GFI +EF+ + S G +E L AF ++D+N +G I+ E+
Sbjct: 65 ANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEK-LSWAFELYDLNHDGYITFDEMLT 123
Query: 105 VLINL 109
++ ++
Sbjct: 124 IVASV 128
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 10/80 (12%)
Query: 3 VSSQFRQIFKVMDSNGDGKLSSSELGEVLICL---------GCDKSNATKE-AEGMLKQM 52
V + + F + D N DG ++ E+ ++ + + +A E E ++M
Sbjct: 7 VHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKM 66
Query: 53 DYNGDGFIDVDEFMDAVHDD 72
D N DG + ++EF++A D
Sbjct: 67 DRNQDGVVTIEEFLEACQKD 86
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATK-EAEGMLKQMDYNGDGFIDV 62
++Q + +F+ +D++ G L EL L T+ E + ++ D +GDG I
Sbjct: 41 ANQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGA 100
Query: 63 DEFMDAVH 70
+EF + VH
Sbjct: 101 EEFQEMVH 108
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal
Domain Of Akazara Scallop Troponin C In Complex With A
Troponin I Fragment
Length = 74
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ ++ F+V+D G + L +L LG + + E E M+ + D +G G +D +EF
Sbjct: 8 ELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTE--DEIENMIAETDTDGSGTVDYEEF 65
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 82 LMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
L +AF + D K G+I LR +L +LG D+ T ++ MI
Sbjct: 9 LKEAFRVLDKEKKGVIKVDVLRWILKSLG-DELTEDEIENMI 49
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 30.4 bits (67), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVD 63
+ F + F+V D GK+S +L +L LG ++A E + +LK ++ + +G ID
Sbjct: 4 TEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDA--EVDELLKGVEVDSNGEIDYK 61
Query: 64 EFMDAV 69
+F++ V
Sbjct: 62 KFIEDV 67
Score = 26.6 bits (57), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 76 KPKEDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
K K + + AF +FD G +S +LR +L LG
Sbjct: 1 KAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLG 35
>pdb|2JJZ|B Chain B, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|C Chain C, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|D Chain D, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2VTG|A Chain A, Crystal Structure Of Human Iba2, Trigonal Crystal Form
Length = 150
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 84 DAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
+ ++ FD+N G I M L+R++ LG K LE ++MI
Sbjct: 54 EKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLE-MKKMI 92
>pdb|2JJZ|A Chain A, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
Length = 150
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 84 DAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
+ ++ FD+N G I M L+R++ LG K LE ++MI
Sbjct: 54 EKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLE-MKKMI 92
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/76 (21%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLK----QMDYNGD 57
++ + + FK+ D++G+G + +EL ++ + + T E + ++D N D
Sbjct: 90 KMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINND 149
Query: 58 GFIDVDEFMDAVHDDS 73
G + ++EF++ + D
Sbjct: 150 GELTLEEFINGMAKDQ 165
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Query: 27 LGEVLICLGCDKSN--ATKEAEGMLKQMDYNGDGFIDVDEFMDAVHDDSGGKPKEDYLMD 84
L E LG N A K + + D N DGF+D EF+ AV+ K E L
Sbjct: 39 LHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEK-MEQKLKW 97
Query: 85 AFLIFDINKNGLISAMEL 102
F ++D + NG I EL
Sbjct: 98 YFKLYDADGNGSIDKNEL 115
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
+ ++ F ++D + DG +S ++ + LG ++ KE MLK+ G ++
Sbjct: 4 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLG--RAPDDKELTAMLKE----APGPLNFTM 57
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
F+ D G E+ + +AF +FD + ++ ++ +L N+G
Sbjct: 58 FLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMG 103
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 30.0 bits (66), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ ++ F ++D + DG +S ++ + LG ++ KE MLK+ G ++ F
Sbjct: 7 EMKEAFSMIDVDRDGFVSKEDIKAISEQLG--RAPDDKELTAMLKE----APGPLNFTMF 60
Query: 66 MDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
+ D G E+ + +AF +FD + ++ ++ +L N+G
Sbjct: 61 LSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMG 105
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 30.0 bits (66), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
+ ++ F ++D + DG +S ++ + LG ++ KE MLK+ G ++
Sbjct: 7 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLG--RAPDDKELTAMLKE----APGPLNFTM 60
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
F+ D G E+ + +AF +FD + ++ ++ +L N+G
Sbjct: 61 FLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMG 106
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 29.6 bits (65), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
+ ++ F ++D + DG +S ++ + LG ++ KE MLK+ G ++
Sbjct: 7 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLG--RAPDDKELTAMLKE----APGPLNFTM 60
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
F+ D G E+ + +AF +FD + ++ ++ +L N+G
Sbjct: 61 FLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMG 106
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 29.6 bits (65), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 10/80 (12%)
Query: 3 VSSQFRQIFKVMDSNGDGKLSSSELGEVLICL----GCDKSNATKE------AEGMLKQM 52
V + + F + D N DG ++ E+ ++ + G +E E ++M
Sbjct: 163 VHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKM 222
Query: 53 DYNGDGFIDVDEFMDAVHDD 72
D N DG + +DEF++ D
Sbjct: 223 DRNQDGVVTIDEFLETCQKD 242
Score = 29.6 bits (65), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 38 KSNATKEAEGMLKQMDYNGDGFIDVDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLI 97
+ +AT A + D +G+G I ++F+ + G E L AF ++DINK+G I
Sbjct: 124 QGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEK-LKWAFNLYDINKDGCI 182
Query: 98 SAMELRRVL 106
+ E+ ++
Sbjct: 183 TKEEMLAIM 191
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 29.6 bits (65), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+ ++ F ++D + DG +S ++ + LG ++ KE MLK+ G ++ F
Sbjct: 19 EMKEAFSMIDVDRDGFVSKEDIKAISEQLG--RAPDDKELTAMLKE----APGPLNFTMF 72
Query: 66 MDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLG 110
+ D G E+ + +AF +FD + ++ ++ +L N+G
Sbjct: 73 LSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMG 117
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 29.6 bits (65), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 10 IFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMDAV 69
+F V D N DG++ SE + L + ++ K D + DG+I +E +D V
Sbjct: 68 VFNVFDENKDGRIEFSEFIQALSV--TSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIV 125
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 36/78 (46%), Gaps = 10/78 (12%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVL----------ICLGCDKSNATKEAEGMLKQMDYN 55
+ R FK+ D + DG ++ +E+ +++ + L +++ K + + MD N
Sbjct: 100 KLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKN 159
Query: 56 GDGFIDVDEFMDAVHDDS 73
DG + + EF + D
Sbjct: 160 ADGKLTLQEFQEGSKADP 177
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 29.3 bits (64), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 10 IFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMDAV 69
++ +D++ DG +S E L +G D ++ +A +D+N +G I DEF+ V
Sbjct: 107 MYDCIDTDKDGYVSLPEFKAFLQAVGPDLTD--DKAITCFNTLDFNKNGQISRDEFLVTV 164
Query: 70 HD 71
+D
Sbjct: 165 ND 166
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 35 GCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKN 94
G +K+ A ++ M +D + DG++ + EF A G +D + F D NKN
Sbjct: 94 GEEKAMAVIQSLIMYDCIDTDKDGYVSLPEF-KAFLQAVGPDLTDDKAITCFNTLDFNKN 152
Query: 95 GLIS 98
G IS
Sbjct: 153 GQIS 156
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 14 MDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMDAVHD 71
+D++ DG +S E L +G D ++ +A +D+N +G I DEF+ V+D
Sbjct: 111 IDTDKDGYVSLPEFKAFLQAVGPDLTD--DKAITCFNTLDFNKNGQISRDEFLVTVND 166
>pdb|3A4U|B Chain B, Crystal Structure Of Mcfd2 In Complex With Carbohydrate
Recognition Domain Of Ergic-53
Length = 143
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 12/76 (15%)
Query: 2 EVSSQFRQI--FKVMDSNGDGKLSSSELGEVLICL----GCDKSNATKEAE------GML 49
E+S Q Q+ FK+ D +G+ L EL + + G +++ E E G+L
Sbjct: 63 EMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVL 122
Query: 50 KQMDYNGDGFIDVDEF 65
+ D N DG+ID EF
Sbjct: 123 RDDDKNNDGYIDYAEF 138
>pdb|2VRG|A Chain A, Structure Of Human Mcfd2
Length = 124
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 12/76 (15%)
Query: 2 EVSSQFRQI--FKVMDSNGDGKLSSSELGEVLICL----GCDKSNATKEAE------GML 49
E+S Q Q+ FK+ D +G+ L EL + + G +++ E E G+L
Sbjct: 44 EMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVL 103
Query: 50 KQMDYNGDGFIDVDEF 65
+ D N DG+ID EF
Sbjct: 104 RDDDKNNDGYIDYAEF 119
>pdb|3LCP|C Chain C, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
pdb|3LCP|D Chain D, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
Length = 93
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 12/76 (15%)
Query: 2 EVSSQFRQI--FKVMDSNGDGKLSSSELGEVLICL----GCDKSNATKEAE------GML 49
E+S Q Q+ FK+ D +G+ L EL + + G +++ E E G+L
Sbjct: 13 EMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVL 72
Query: 50 KQMDYNGDGFIDVDEF 65
+ D N DG+ID EF
Sbjct: 73 RDDDKNNDGYIDYAEF 88
>pdb|3V4P|A Chain A, Crystal Structure Of A4b7 Headpiece Complexed With Fab
Act-1
pdb|3V4P|C Chain C, Crystal Structure Of A4b7 Headpiece Complexed With Fab
Act-1
pdb|3V4V|A Chain A, Crystal Structure Of A4b7 Headpiece Complexed With Fab
Act-1 And Ro0505376
pdb|3V4V|C Chain C, Crystal Structure Of A4b7 Headpiece Complexed With Fab
Act-1 And Ro0505376
Length = 597
Score = 28.5 bits (62), Expect = 1.3, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 9 QIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFMDA 68
++F ++S +++ E V G DK A + E ++ D + DGF DV
Sbjct: 305 RVFVYINSGSGAVMNAMETNLV----GSDKY-AARFGESIVNLGDIDNDGFEDV------ 353
Query: 69 VHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELR 103
+ G P+ED L A I++ +G+ S R
Sbjct: 354 ----AIGAPQEDDLQGAIYIYNGRADGISSTFSQR 384
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 84 DAFLIFDINKNGLISAMELRRVLINLGCDKCTLE 117
+AF +FD + NG IS+ EL V+ +LG E
Sbjct: 14 EAFALFDKDNNGSISSSELATVMRSLGLSPSEAE 47
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 9 QIFKVMDSN--GDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFM 66
++FK + S+ DG + E + L +++ A+ + D +G I+ EF+
Sbjct: 41 ELFKKLSSSIIDDGLIHKEEFQ---LALFRNRNRRNLFADRIFDVFDVKRNGVIEFGEFV 97
Query: 67 DAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINL 109
++ P + + AF ++D+ + G I EL+ +++ L
Sbjct: 98 RSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVAL 140
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 6/73 (8%)
Query: 3 VSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKE------AEGMLKQMDYNG 56
V + + FK+ D G + EL E+++ L + E + Q D
Sbjct: 109 VHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKN 168
Query: 57 DGFIDVDEFMDAV 69
DG ID+DE+ D V
Sbjct: 169 DGKIDIDEWKDFV 181
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 9 QIFKVMDSN--GDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFM 66
++FK + S+ DG + E + L +++ A+ + D +G I+ EF+
Sbjct: 41 ELFKKLSSSIIDDGLIHKEEFQ---LALFRNRNRRNLFADRIFDVFDVKRNGVIEFGEFV 97
Query: 67 DAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINL 109
++ P + + AF ++D+ + G I EL+ +++ L
Sbjct: 98 RSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVAL 140
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 6/73 (8%)
Query: 3 VSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKE------AEGMLKQMDYNG 56
V + + FK+ D G + EL E+++ L + E + Q D
Sbjct: 109 VHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKN 168
Query: 57 DGFIDVDEFMDAV 69
DG ID+DE+ D V
Sbjct: 169 DGKIDIDEWKDFV 181
>pdb|3A8R|A Chain A, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
pdb|3A8R|B Chain B, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
Length = 179
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEG-------MLKQMDYNGD 57
++ R F ++D N DG+L++ E+ E+ I L + +K E +++++D
Sbjct: 98 NRLRTFFDMVDKNADGRLTAEEVKEI-IALSASANKLSKIKERADEYTALIMEELDPTNL 156
Query: 58 GFIDVDEF 65
G+I++++
Sbjct: 157 GYIEMEDL 164
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 8 RQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATK-EAEGMLKQMDYNGDGFIDVDEFM 66
++ F ++D + G + EL L D T E + LK D +GDG I VDEF
Sbjct: 45 KKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDEFT 104
Score = 25.8 bits (55), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 85 AFLIFDINKNGLISAMELRRVLINLGCDKCTLED 118
AF I D +K+G I EL+ L N D L D
Sbjct: 47 AFAIIDQDKSGFIEEDELKLFLQNFKADARALTD 80
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 5 SQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDE 64
++ R +F D+N G+L E + L ++ AE + +++D + DG I E
Sbjct: 27 ARLRSVFAACDANRSGRLEREEFRALCTELRVRPAD----AEAVFQRLDADRDGAITFQE 82
Query: 65 F 65
F
Sbjct: 83 F 83
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/63 (20%), Positives = 32/63 (50%)
Query: 45 AEGMLKQMDYNGDGFIDVDEFMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRR 104
A+ + D +G + +EF A+ P +D + +F ++D+ + G I E+++
Sbjct: 87 ADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQ 146
Query: 105 VLI 107
+++
Sbjct: 147 MVV 149
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 11 FKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGM-------LKQMDYNGDGFIDVD 63
F++ D + DG L+ +L ++ CL + + A M L++ D + DG I++
Sbjct: 104 FRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLS 163
Query: 64 EFMDAV 69
EF +
Sbjct: 164 EFQHVI 169
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 11 FKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGM-------LKQMDYNGDGFIDVD 63
F++ D + DG L+ +L ++ CL + + A M L++ D + DG I++
Sbjct: 135 FRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLS 194
Query: 64 EFMDAV 69
EF +
Sbjct: 195 EFQHVI 200
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 76 KPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
K ++ ++ AF +FD ++ G IS L+RV LG + T E+ + MI
Sbjct: 7 KDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLTDEELQEMI 53
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 9 QIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFM 66
+ FK+ D + GK+S L V LG + ++ +E + M+ + D +GDG + EF+
Sbjct: 15 KAFKLFDDDETGKISFKNLKRVAKELGENLTD--EELQEMIDEADRDGDGEVSEQEFL 70
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 10 IFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGM---LKQMDYNGDGFIDVDEF 65
+FK +D NGDG +S E+ + K A K + + K +D +G+G ID +EF
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFV-----SKKRAIKNEQLLQLIFKSIDADGNGEIDQNEF 58
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 65 FMDAVHDDSGGKPKEDYLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
F+ + K ++ ++ AF +FD ++ G IS L+RV LG + T E+ + MI
Sbjct: 6 FLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLTDEELQEMI 63
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 9 QIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFM 66
+ FK+ D + GK+S L V LG + ++ +E + M+ + D +GDG + EF+
Sbjct: 25 KAFKLFDDDETGKISFKNLKRVAKELGENLTD--EELQEMIDEADRDGDGEVSEQEFL 80
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 2 EVSSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNAT-KEAEGMLKQMDYNGDGFI 60
+ +Q +++F+++D + G + EL VL + E + +L D + DG I
Sbjct: 38 KTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKI 97
Query: 61 DVDEFMDAV 69
DEF V
Sbjct: 98 GADEFAKMV 106
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Query: 10 IFKVMDSNGDGKLSSSELGEVLICL---GCDKSNATKEAEGMLKQMDYNGDGFIDVDEF 65
+F MD +G L E E L L G D ++AT + ++D NG G + DEF
Sbjct: 138 MFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATT----VFNEIDTNGSGVVTFDEF 192
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATK-EAEGMLKQMDYNGDGFIDVDE 64
Q +++F ++D + G + EL L T E + L D +GDG I V+E
Sbjct: 42 QIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEE 101
Query: 65 FMDAVH 70
F V
Sbjct: 102 FQSLVK 107
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATK-EAEGMLKQMDYNGDGFIDVDE 64
Q +++F ++D + G + EL L T E + L D +GDG I V+E
Sbjct: 43 QIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEE 102
Query: 65 FMDAVH 70
F V
Sbjct: 103 FQSLVK 108
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 21 KLSSSELGEVLI-----CLGCDKSNATKE--AEGMLKQMDYNGDGFIDVDEFMDAVHDDS 73
K+SS+ + + LI L K+N + A+ + D +G + +EF A+
Sbjct: 25 KISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFH 84
Query: 74 GGKPKEDYLMDAFLIFDINKNGLISAMELRRVLI 107
P +D + +F ++D+ + G I E++++++
Sbjct: 85 PNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVV 118
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 26.9 bits (58), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 15/81 (18%)
Query: 10 IFKVMDSNGDGKLSSSELGEVLICLGCDKSNAT----------KEAEGMLKQMDYNGDGF 59
+ K+ DSN DGKL +E+ +L + N KE + D +G+G+
Sbjct: 152 MLKLFDSNNDGKLELTEMARLLPV----QENFLLKFQGIKMCGKEFNKAFELYDQDGNGY 207
Query: 60 IDVDEFMDAVHDDSGGKPKED 80
ID +E +DA+ D K K++
Sbjct: 208 IDENE-LDALLKDLCEKNKQE 227
Score = 26.2 bits (56), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 28/128 (21%)
Query: 6 QFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNAT----KEAEG---MLKQMDYNGDG 58
+F + ++ D++ G + + EL L L +K+N T K AE MLK D N DG
Sbjct: 104 EFMKTWRKYDTDHSGFIETEELKNFLKDL-LEKANKTVDDTKLAEYTDLMLKLFDSNNDG 162
Query: 59 FIDVDEFMDAVHDDSGGKPKEDYLM-------------DAFLIFDINKNGLISAMELRRV 105
+++ E + +E++L+ AF ++D + NG I EL +
Sbjct: 163 KLELTEMARLL------PVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDAL 216
Query: 106 LINLGCDK 113
L +L C+K
Sbjct: 217 LKDL-CEK 223
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
Length = 76
Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 21 KLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVDEFM 66
++S EL V+ LG + M++++D NGDG + +EF+
Sbjct: 23 QISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFL 68
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 8 RQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATK-EAEGMLKQMDYNGDGFIDVDEFM 66
++ F ++D + G + EL L D T E + LK D +GDG I VDE+
Sbjct: 44 KKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDEWT 103
Score = 25.8 bits (55), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 85 AFLIFDINKNGLISAMELRRVLINLGCDKCTLED 118
AF I D +K+G I EL+ L N D L D
Sbjct: 46 AFAIIDQDKSGFIEEDELKLFLQNFKADARALTD 79
>pdb|1K2H|A Chain A, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1K2H|B Chain B, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1ZFS|A Chain A, Solution Structure Of S100a1 Bound To Calcium
pdb|1ZFS|B Chain B, Solution Structure Of S100a1 Bound To Calcium
pdb|2K2F|A Chain A, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2K2F|B Chain B, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2KBM|A Chain A, Ca-S100a1 Interacting With Trtk12
pdb|2KBM|B Chain B, Ca-S100a1 Interacting With Trtk12
Length = 93
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 21 KLSSSELGEVLICLGCDKSNATKEAEG---MLKQMDYNGDGFIDVDEFM 66
KLS EL ++L + K+A+ ++K++D NGDG +D EF+
Sbjct: 27 KLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFV 75
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 8 RQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNAT-KEAEGMLKQMDYNGDGFIDVDEF 65
++ F V+D + G + EL L T E + LK D +GDG I VDE+
Sbjct: 45 KKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEW 103
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 26.2 bits (56), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 49 LKQMDYNGDGFIDVDEFMDAVHDDSG-GKPKEDYLMDAFLI-FDINKNGLISAMELRRVL 106
+ D +GDG I VDE A+ +G G+P +DA + D++++G ++ E R+L
Sbjct: 12 FRAFDQDGDGHITVDELRRAM---AGLGQPLPQEELDAMIREADVDQDGRVNYEEFARML 68
Query: 107 IN 108
Sbjct: 69 AQ 70
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 26.2 bits (56), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 8 RQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNAT-KEAEGMLKQMDYNGDGFIDVDEF 65
++ F V+D + G + EL L T E + L D +GDG I VDEF
Sbjct: 44 KKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEF 102
>pdb|2FCD|A Chain A, Solution Structure Of N-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 78
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 8 RQIFKVMDSNGDGKLSSSELGEVLICLGCDKSN 40
+ IF + D G G ++ LG+ L +G + +N
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTN 39
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 26.2 bits (56), Expect = 7.3, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 11 FKVMDSNGDGKLSSSELGEVLICLG 35
F++ D N DG + ELGE+L G
Sbjct: 11 FRIFDKNADGYIDIEELGEILRATG 35
>pdb|2B59|B Chain B, The Type Ii Cohesin Dockerin Complex
Length = 172
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 4 SSQFRQIFKVMDSNGDGKLSSSELGEVLICLGCDKSNATKEAEGMLKQMDYNGDGFIDVD 63
+SQ + V D D ++ ++ EV+ C NATK + ++++D N +G I++
Sbjct: 91 TSQAPIMMWVGDIVKDNSINLLDVAEVIRCF-----NATKGSANYVEELDINRNGAINMQ 145
Query: 64 EFMDAVHDDSGGKPKEDY 81
+ M VH G DY
Sbjct: 146 DIM-IVHKHFGAT-SSDY 161
>pdb|1NSH|A Chain A, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
pdb|1NSH|B Chain B, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
Length = 101
Score = 25.8 bits (55), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 48 MLKQMDYNGDGFIDVDEFMDAV 69
M+K++D N DG +D EF++ +
Sbjct: 59 MMKKLDLNSDGQLDFQEFLNLI 80
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 25.8 bits (55), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 81 YLMDAFLIFDINKNGLISAMELRRVLINLGCDKCTLEDCRRMI 123
Y+ + F D N NG +S E+ VL ++G K D R++
Sbjct: 40 YINELFYKLDTNHNGSLSHREIYTVLASVGIKKW---DINRIL 79
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,689,577
Number of Sequences: 62578
Number of extensions: 151535
Number of successful extensions: 1283
Number of sequences better than 100.0: 294
Number of HSP's better than 100.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 393
Number of HSP's gapped (non-prelim): 547
length of query: 145
length of database: 14,973,337
effective HSP length: 89
effective length of query: 56
effective length of database: 9,403,895
effective search space: 526618120
effective search space used: 526618120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.7 bits)