Citrus Sinensis ID: 047503

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920

MAEAAVNLVIETLGSLLVQEINLLGSTKQEVQSIKNELESIRSFLKDADAREAAEEEEGESNEGVKTWVKQVREEAFRIEDVIDEYILKEAKLARGSGLTYHLRKFFCFINVLKLHHGIASKIEVIKSSLADIQRRERHYSFRSIEQGSVSRTRNVISHDPRVGSLFIEDDEVVGIESARDILIGWLVNGRKQRSVVALVGQGGIGKTTLAGKLFNNQYVMNHFDCRAWITVGRECMKKDLLIKMIKEFHQLTGQSALGEMNNMEEKDLIIAVRQYLHDKNYMIVLDDVWKIELWGDVEHALLDNKKGSRIMLTTRHKAVADFCKQSSFVQVHELEALPAVEAWRLFCRKAFASVSDGGCPPELEKLSHEIVAKCGGLPLAIVAVGGLLSTKHGSVSEWRRSLEGLGSKLGSDPHLKICSRVLSEGYHDLPHHLKSCLLYFGLFPQGYSISCARLIRLWIAEGFVPYSTRPPSEQLGEEYLSELIDRSLVHVSRRARSCRVHDLMHEIILEKTKDLGFCLDLSREDLSCCTKTRRISINQSLNNVLEWTEDSKIRSVFFLNVDKLPGSFMTKLVAEFKLMKVLDFEDAPIEFLPEEVGNLFHLHYLSVRNTKVKVLPKSIGRLLNLQTLDLKHSLVTQLPVEIKNLKKLRYLLVYHSDNGTHERGVKIQEGFGSLTDLQKLYIVQANSTILKELRKLRQLRKLGIQLTNDDGKNLCASIADMENLESLTVESTSREETFDIQSLGSPPQYLEHLYLVGSMKNLPDWIFKLKNLVRIGLYWSELTNDPMNVLQALPNLLELRLRDAYDYEKLHFKDGWFPRLQRLVLLDLKGVTLMMIDKGAMPCLRELKIGPCPLLKEIPAGIEHLRNLEILKFCGMLTVIASMIDDANWQKIIELVPCVFVSFKRAGKNVYKPVQLARN

cHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccEECccccHHHHHHHHHccccccEEEEEEcccccccHHHHHHHcccccccccccEEEEEEEcccccHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHcccccEEEEEEccccHHHHHHHHHHccccccccEEEEEcccHHHHHHccccccccEEEcccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccHHHHHHHHHHccccccccccHHHHHHHHHcccccccccHHHHHHccccccccccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHcccccEEcccccEEEEcHHHHHHHHHHHcccccEEEcccccccccccEEEEEEEccccccccccccccEEEEEEEccccccccccccccccccEEEEEECccccccccccccccccccccccccccccccccccccccccccEEEccccccccccHHHHcccccccEEEccccccccccccccccccccccccccccEEEcccHHHHHHHccccccEEEEEEEccccHHHHHHccccccccEEEEEEcccccccccccccccccccEEEEEEEEccccccccccccccEEEEEEECcccccccHHccccccccEEEEEEcccccEEEECcccccccccEEcccccccEEEECcccccccccEEEECcccccccccccccccccccEEEEEccHHHHHHHcccccHHHHHccccEEEEEEECcccccccccccccc

MAEAAVNLVIETLGSLLVQEINLLGSTKQEVQSIKNELESIRSFLKDADAREA******ESNEGVKTWVKQVREEAFRIEDVIDEYILKEAKLARGSGLTYHLRKFFCFINVLKLHHGIASKIEVIKSSLADIQRRERHYSFR*****************PRVGSLFIEDDEVVGIESARDILIGWLVNGRKQRSVVALVGQGGIGKTTLAGKLFNNQYVMNHFDCRAWITVGRECMKKDLLIKMIKEFHQLTGQSALGEMNNMEEKDLIIAVRQYLHDKNYMIVLDDVWKIELWGDVEHALLDNKKGSRIMLTTRHKAVADFCKQSSFVQVHELEALPAVEAWRLFCRKAFASVSDGGCPPELEKLSHEIVAKCGGLPLAIVAVGGLLSTKHGSVSEWRRSLEGLGSKLGSDPHLKICSRVLSEGYHDLPHHLKSCLLYFGLFPQGYSISCARLIRLWIAEGFVPYSTRPPSEQLGEEYLSELIDRSLVHVSRRARSCRVHDLMHEIILEKTKDLGFCLDLSREDLSCCTKTRRISINQSLNNVLEWTEDSKIRSVFFLNVDKLPGSFMTKLVAEFKLMKVLDFEDAPIEFLPEEVGNLFHLHYLSVRNTKVKVLPKSIGRLLNLQTLDLKHSLVTQLPVEIKNLKKLRYLLVYHSDNGTHERGVKIQEGFGSLTDLQKLYIVQANSTILKELRKLRQLRKLGIQLTNDDGKNLCASIADMENLESLTVESTSREETFDIQSLGSPPQYLEHLYLVGSMKNLPDWIFKLKNLVRIGLYWSELTNDPMNVLQALPNLLELRLRDAYDYEKLHFKDGWFPRLQRLVLLDLKGVTLMMIDKGAMPCLRELKIGPCPLLKEIPAGIEHLRNLEILKFCGMLTVIASMIDDANWQKIIELVPCVFVSFKRAGKNVYK*******

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Disease resistance protein RPM1	Disease resistance (R) protein that specifically recognizes the AvrRpm1 type III effector avirulence protein from Pseudomonas syringae. Resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via an indirect interaction with this avirulence protein. That triggers a defense system including the hypersensitive response, which restricts the pathogen growth. Acts via its interaction with RIN4, and probably triggers the plant resistance when RIN4 is phosphorylated by AvrRpm1. It is then degraded at the onset of the hypersensitive response.	probable	Q39214

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2Z63, chain A
Confidence level:very confident
Coverage over the Query: 551-687
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Template: 2Z63, chain A
Confidence level:very confident
Coverage over the Query: 530-878
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Template: 3SFZ, chain A
Confidence level:very confident
Coverage over the Query: 169-462,474-516
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Template: 2A5Y, chain B
Confidence level:very confident
Coverage over the Query: 174-518
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Template: 3QFL, chain A
Confidence level:very confident
Coverage over the Query: 4-119
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Template: 3SHF, chain A
Confidence level:probable
Coverage over the Query: 145-462,473-514
View the alignment between query and template
View the model in PyMOL