Your job contains 1 sequence.
>047508
YPSGTVGRSFREEIRNKIEKWQEPSPAKRPKPLPVPDSEPKKMKGGRRLRKMKERYAVTD
MRKLANRTQFGVAEESSFVNGLGEGYGMLGQAGSSKIRVFVAQMKLAAKVAKKFKEKHYG
SSDATSGRKSRLAFTPVQWLELSIPQAHAQQLGSGSQSTYFSQKG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 047508
(165 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2195698 - symbol:emb1220 "AT1G60170" species:3... 480 1.0e-45 1
DICTYBASE|DDB_G0289595 - symbol:prpf31 "pre-mRNA processi... 250 8.6e-21 1
UNIPROTKB|Q5U5C5 - symbol:prpf31 "U4/U6 small nuclear rib... 249 1.5e-20 1
POMBASE|SPBC119.13c - symbol:prp31 "U4/U6 x U5 tri-snRNP ... 240 1.6e-19 1
UNIPROTKB|E1BM48 - symbol:PRPF31 "Uncharacterized protein... 239 1.8e-19 1
UNIPROTKB|F1PKI0 - symbol:PRPF31 "Uncharacterized protein... 239 1.8e-19 1
UNIPROTKB|Q8WWY3 - symbol:PRPF31 "U4/U6 small nuclear rib... 239 1.8e-19 1
UNIPROTKB|F1RNI3 - symbol:PRPF31 "Uncharacterized protein... 239 1.8e-19 1
MGI|MGI:1916238 - symbol:Prpf31 "PRP31 pre-mRNA processin... 239 1.8e-19 1
UNIPROTKB|Q6NVP6 - symbol:prpf31 "U4/U6 small nuclear rib... 237 3.0e-19 1
ZFIN|ZDB-GENE-040426-1561 - symbol:prpf31 "PRP31 pre-mRNA... 235 5.2e-19 1
FB|FBgn0036487 - symbol:Prp31 species:7227 "Drosophila me... 231 1.4e-18 1
UNIPROTKB|E7EVX8 - symbol:PRPF31 "U4/U6 small nuclear rib... 226 4.6e-18 1
ASPGD|ASPL0000059636 - symbol:AN1260 species:162425 "Emer... 179 6.6e-13 1
WB|WBGene00022458 - symbol:prp-31 species:6239 "Caenorhab... 175 1.7e-12 1
GENEDB_PFALCIPARUM|PFD0450c - symbol:PFD0450c "pre-mrna s... 152 5.7e-10 1
UNIPROTKB|C0H4A0 - symbol:PFD0450c "Pre-mRNA splicing fac... 152 5.7e-10 1
UNIPROTKB|E7ESA8 - symbol:PRPF31 "U4/U6 small nuclear rib... 150 6.9e-10 1
>TAIR|locus:2195698 [details] [associations]
symbol:emb1220 "AT1G60170" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009793 "embryo development ending in
seed dormancy" evidence=NAS] InterPro:IPR027105 Pfam:PF01798
EMBL:CP002684 GO:GO:0003676 GO:GO:0030529 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08060 SMART:SM00931 KO:K12844 OMA:VESDPEY
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 EMBL:AY080777
EMBL:AY117155 EMBL:AY084782 IPI:IPI00547292 RefSeq:NP_564754.1
UniGene:At.21797 ProteinModelPortal:Q8RXN6 SMR:Q8RXN6 STRING:Q8RXN6
PRIDE:Q8RXN6 EnsemblPlants:AT1G60170.1 GeneID:842312
KEGG:ath:AT1G60170 TAIR:At1g60170 InParanoid:Q8RXN6
PhylomeDB:Q8RXN6 ProtClustDB:CLSN2688931 ArrayExpress:Q8RXN6
Genevestigator:Q8RXN6 Uniprot:Q8RXN6
Length = 485
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 100/166 (60%), Positives = 116/166 (69%)
Query: 2 PSGTVGRSFREEIRNKIEKWQEPSPAKRPKPLPVPDSEPXXXXXXXXXXXXXXXYAVTDM 61
P G G++FREEIR KIEKWQEP PA++PKPLPVPDSEP Y VTDM
Sbjct: 313 PLGISGKAFREEIRKKIEKWQEPPPARQPKPLPVPDSEPKKRRGGRRLRKMKERYQVTDM 372
Query: 62 RKLANRTQFGVAEESSFVNGLGEGYGMLGQAGSSKIRV--FVAQMKLAAKVAKKFKEKHY 119
RKLANR FG EESS +GLGEGYGMLGQAGS+++RV +++K+ AKVAKK KE+ Y
Sbjct: 373 RKLANRMAFGTPEESSLGDGLGEGYGMLGQAGSNRLRVSSVPSKLKINAKVAKKLKERQY 432
Query: 120 GSSDATSGRKSRLAFTPVQWLELSIPQAHAQQLGSGSQSTYFSQKG 165
TSG S LAFTPVQ +EL PQ A LGSG+QSTYFS+ G
Sbjct: 433 AGGATTSGLTSSLAFTPVQGIELCNPQ-QALGLGSGTQSTYFSESG 477
>DICTYBASE|DDB_G0289595 [details] [associations]
symbol:prpf31 "pre-mRNA processing factor 31"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IEA;ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IEA;ISS] [GO:0000244 "assembly of
spliceosomal tri-snRNP" evidence=IEA] InterPro:IPR027105
dictyBase:DDB_G0289595 Pfam:PF01798 GenomeReviews:CM000154_GR
GO:GO:0000398 GO:GO:0046540 EMBL:AAFI02000146 eggNOG:COG1498
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 OMA:RDHYSIR
RefSeq:XP_002649103.1 EnsemblProtists:DDB0304959 GeneID:8627218
KEGG:ddi:DDB_G0289595 ProtClustDB:CLSZ2735590 Uniprot:C7G068
Length = 460
Score = 250 (93.1 bits), Expect = 8.6e-21, P = 8.6e-21
Identities = 67/162 (41%), Positives = 88/162 (54%)
Query: 4 GTVGRSFREEIRNKIEKWQEPSPAKRPKPLPVPDSEPXXXXXXXXXXXXXXXYAVTDMRK 63
G GR +R+EI KIEKWQEP P K+ K LP P+ Y VTD +K
Sbjct: 295 GETGRQYRDEILAKIEKWQEPPPQKQDKALPAPEEGKRTKRGGKKARLYKQKYGVTDFQK 354
Query: 64 LANRTQFGVAEESSFVNGLGEGYGMLGQAGSSKIRVFVAQMKLAAKVAKKFKEKHYG--- 120
NR FGV E++ +G+G GM+G S K+R+ VAQ + K KK ++K+YG
Sbjct: 355 AKNRMSFGVEEKTIGESGIG--LGMIG-GESGKVRL-VAQERGILK-KKKLEQKNYGGSM 409
Query: 121 SSDATSGRKSRLAFTPVQWLELSIPQAHAQQLGSGSQSTYFS 162
+S +TSG S +A TPVQ L+LSI Q +Q YFS
Sbjct: 410 TSASTSGLAS-VAITPVQGLQLSITQNIREQ--DNKTEKYFS 448
>UNIPROTKB|Q5U5C5 [details] [associations]
symbol:prpf31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:8355 "Xenopus laevis" [GO:0071339 "MLL1 complex"
evidence=ISS] InterPro:IPR027105 Pfam:PF01798 GO:GO:0008380
GO:GO:0006397 GO:GO:0005681 GO:GO:0003723 GO:GO:0071339
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
PROSITE:PS51358 CTD:26121 HOVERGEN:HBG082193 KO:K12844
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 EMBL:BC084759
RefSeq:NP_001088437.1 UniGene:Xl.48511 ProteinModelPortal:Q5U5C5
SMR:Q5U5C5 GeneID:495301 KEGG:xla:495301 Xenbase:XB-GENE-865857
Uniprot:Q5U5C5
Length = 498
Score = 249 (92.7 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 61/171 (35%), Positives = 86/171 (50%)
Query: 2 PSGTVGRSFREEIRNKIEKWQEPSPAKRPKPLPVPDSEPXXXXXXXXXXXXXXXYAVTDM 61
P G +G +EEI K +KWQEP P K+ KPLP P +T++
Sbjct: 311 PEGKIGYDLKEEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRYRKMKERLGLTEI 370
Query: 62 RKLANRTQFGVAEESSFVNGLGEGYGMLGQAGSSKIRVFVAQMKLAAKVAKKFK---EKH 118
RK ANR FG EE ++ LG G LG++GS +IR A+++K + +K
Sbjct: 371 RKQANRMSFGEIEEDAYQEDLGFSLGHLGKSGSGRIRQAQVNEATKARISKTLQRTLQKQ 430
Query: 119 ---YGSS----DATSGRKSRLAFTPVQWLELSIPQAHAQQLGSGSQSTYFS 162
YG D +SG S +AFTP+Q LE+ PQA +++ +Q YFS
Sbjct: 431 SVVYGGKSTVRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQK-YFS 480
>POMBASE|SPBC119.13c [details] [associations]
symbol:prp31 "U4/U6 x U5 tri-snRNP complex subunit
Prp31" species:4896 "Schizosaccharomyces pombe" [GO:0000244
"assembly of spliceosomal tri-snRNP" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0007126
"meiosis" evidence=NAS] [GO:0045292 "mRNA cis splicing, via
spliceosome" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] InterPro:IPR027105 PomBase:SPBC119.13c
Pfam:PF01798 GO:GO:0007126 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0005681 GO:GO:0000244 GO:GO:0003723 GO:GO:0046540
GO:GO:0045292 eggNOG:COG1498 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 PROSITE:PS51358 KO:K12844
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785
HOGENOM:HOG000207983 PIR:T39311 RefSeq:NP_595294.1
ProteinModelPortal:O42904 IntAct:O42904 STRING:O42904
EnsemblFungi:SPBC119.13c.1 GeneID:2540045 KEGG:spo:SPBC119.13c
OMA:RDHYSIR OrthoDB:EOG4ZCXDV NextBio:20801182 Uniprot:O42904
Length = 518
Score = 240 (89.5 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 63/156 (40%), Positives = 83/156 (53%)
Query: 1 YPSGTVGRSFREEIRNKIEKWQEPSPAKRPK-PLPVPDSEPXXXXXXXXXXXXXXXYAVT 59
YP G+ G S R+E+ KIEK EP P+++P LPVPD P YAVT
Sbjct: 335 YPDGSFGISARKEVERKIEKLLEP-PSQKPTVALPVPDDRPKRRRGGRRIRKMKEQYAVT 393
Query: 60 DMRKLANRTQFGVAEESSFVNGLGEGYGMLGQAGSSKIR-VFV-AQMKLAAKVAKKFKEK 117
++R+L NR FG E F EG GMLGQ G KIR V + ++ KL A+K + +
Sbjct: 394 ELRRLQNRVAFGKEEAEVFNFDETEGLGMLGQEGEGKIRAVSIDSRTKLRLPKARKAQLQ 453
Query: 118 HYGSSD--ATSGRKSRLAFTPVQWLELSIPQAHAQQ 151
+ A SG +S L+FTP+Q +EL P QQ
Sbjct: 454 SMAQKNPLAASGLQSSLSFTPIQGIELVNPLLQRQQ 489
>UNIPROTKB|E1BM48 [details] [associations]
symbol:PRPF31 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0070990 "snRNP
binding" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA] [GO:0005687 "U4 snRNP" evidence=IEA]
[GO:0000244 "assembly of spliceosomal tri-snRNP" evidence=IEA]
InterPro:IPR027105 Pfam:PF01798 GO:GO:0016607 GO:GO:0000244
GO:GO:0015030 GO:GO:0071339 GO:GO:0046540 GO:GO:0005687
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
CTD:26121 GeneTree:ENSGT00550000075069 KO:K12844 OMA:VESDPEY
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 GO:GO:0070990
EMBL:DAAA02047818 IPI:IPI00691365 RefSeq:NP_001193214.1
UniGene:Bt.5160 Ensembl:ENSBTAT00000010198 GeneID:513577
KEGG:bta:513577 NextBio:20870922 Uniprot:E1BM48
Length = 499
Score = 239 (89.2 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 59/169 (34%), Positives = 85/169 (50%)
Query: 4 GTVGRSFREEIRNKIEKWQEPSPAKRPKPLPVPDSEPXXXXXXXXXXXXXXXYAVTDMRK 63
G VG ++EI K +KWQEP P K+ KPLP P +T++RK
Sbjct: 314 GKVGYELKDEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRYRKMKERLGLTEIRK 373
Query: 64 LANRTQFGVAEESSFVNGLGEGYGMLGQAGSSKIRVFVAQMKLAAKVAKKFK---EKH-- 118
ANR FG EE ++ LG G LG++GS ++R A+++K + +K
Sbjct: 374 QANRMSFGEIEEDAYQEDLGFSLGHLGKSGSGRVRQTQVNEATKARISKTLQRTLQKQSV 433
Query: 119 -YGSS----DATSGRKSRLAFTPVQWLELSIPQAHAQQLGSGSQSTYFS 162
YG D +SG S +AFTP+Q LE+ PQA +++ +Q YFS
Sbjct: 434 VYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQK-YFS 481
>UNIPROTKB|F1PKI0 [details] [associations]
symbol:PRPF31 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071339 "MLL1 complex" evidence=IEA]
[GO:0070990 "snRNP binding" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA] [GO:0005687
"U4 snRNP" evidence=IEA] [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IEA] InterPro:IPR027105 Pfam:PF01798
GO:GO:0016607 GO:GO:0000244 GO:GO:0015030 GO:GO:0071339
GO:GO:0046540 GO:GO:0005687 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 CTD:26121 GeneTree:ENSGT00550000075069
KO:K12844 OMA:VESDPEY InterPro:IPR019175 PANTHER:PTHR13904
Pfam:PF09785 GO:GO:0070990 EMBL:AAEX03000741 RefSeq:XP_850917.1
Ensembl:ENSCAFT00000004264 GeneID:476389 KEGG:cfa:476389
Uniprot:F1PKI0
Length = 499
Score = 239 (89.2 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 59/169 (34%), Positives = 85/169 (50%)
Query: 4 GTVGRSFREEIRNKIEKWQEPSPAKRPKPLPVPDSEPXXXXXXXXXXXXXXXYAVTDMRK 63
G VG ++EI K +KWQEP P K+ KPLP P +T++RK
Sbjct: 314 GKVGYELKDEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRYRKMKERLGLTEIRK 373
Query: 64 LANRTQFGVAEESSFVNGLGEGYGMLGQAGSSKIRVFVAQMKLAAKVAKKFK---EKH-- 118
ANR FG EE ++ LG G LG++GS ++R A+++K + +K
Sbjct: 374 QANRMSFGEIEEDAYQEDLGFSLGHLGKSGSGRVRQTQVNEATKARISKTLQRTLQKQSV 433
Query: 119 -YGSS----DATSGRKSRLAFTPVQWLELSIPQAHAQQLGSGSQSTYFS 162
YG D +SG S +AFTP+Q LE+ PQA +++ +Q YFS
Sbjct: 434 VYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQK-YFS 481
>UNIPROTKB|Q8WWY3 [details] [associations]
symbol:PRPF31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IMP;IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0015030 "Cajal body"
evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0043021
"ribonucleoprotein complex binding" evidence=IDA] [GO:0046540
"U4/U6 x U5 tri-snRNP complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070990 "snRNP binding" evidence=IPI] [GO:0005690
"U4atac snRNP" evidence=TAS] [GO:0005687 "U4 snRNP" evidence=IDA]
[GO:0005684 "U2-type spliceosomal complex" evidence=IC]
InterPro:IPR027105 Pfam:PF01798 GO:GO:0016607 GO:GO:0000244
GO:GO:0003723 Orphanet:791 GO:GO:0015030 GO:GO:0071339
GO:GO:0046540 GO:GO:0005684 GO:GO:0005687 EMBL:AC012314 PDB:2OZB
PDB:3SIU PDB:3SIV PDBsum:2OZB PDBsum:3SIU PDBsum:3SIV
eggNOG:COG1498 InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 CTD:26121 HOVERGEN:HBG082193
KO:K12844 OMA:VESDPEY OrthoDB:EOG4W6NW1 InterPro:IPR019175
PANTHER:PTHR13904 Pfam:PF09785 EMBL:AY040822 EMBL:AF308303
EMBL:AL050369 EMBL:AK098547 EMBL:BC117389 IPI:IPI00167198
IPI:IPI00292000 IPI:IPI00738596 RefSeq:NP_056444.3
UniGene:Hs.515598 ProteinModelPortal:Q8WWY3 SMR:Q8WWY3
IntAct:Q8WWY3 STRING:Q8WWY3 PhosphoSite:Q8WWY3 DMDM:90101442
PaxDb:Q8WWY3 PRIDE:Q8WWY3 DNASU:26121 Ensembl:ENST00000321030
Ensembl:ENST00000571534 Ensembl:ENST00000571610
Ensembl:ENST00000572776 Ensembl:ENST00000574214
Ensembl:ENST00000576100 Ensembl:ENST00000576581
Ensembl:ENST00000576817 Ensembl:ENST00000576989 GeneID:26121
KEGG:hsa:26121 UCSC:uc002qdh.2 GeneCards:GC19P054618
H-InvDB:HIX0027609 H-InvDB:HIX0137464 HGNC:HGNC:15446 HPA:HPA041939
MIM:600138 MIM:606419 neXtProt:NX_Q8WWY3 PharmGKB:PA33814
HOGENOM:HOG000207983 InParanoid:Q8WWY3 PhylomeDB:Q8WWY3
EvolutionaryTrace:Q8WWY3 GenomeRNAi:26121 NextBio:48131
ArrayExpress:Q8WWY3 Bgee:Q8WWY3 CleanEx:HS_PRPF31
Genevestigator:Q8WWY3 GermOnline:ENSG00000105618 GO:GO:0005690
GO:GO:0070990 Uniprot:Q8WWY3
Length = 499
Score = 239 (89.2 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 59/169 (34%), Positives = 85/169 (50%)
Query: 4 GTVGRSFREEIRNKIEKWQEPSPAKRPKPLPVPDSEPXXXXXXXXXXXXXXXYAVTDMRK 63
G VG ++EI K +KWQEP P K+ KPLP P +T++RK
Sbjct: 314 GKVGYELKDEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRYRKMKERLGLTEIRK 373
Query: 64 LANRTQFGVAEESSFVNGLGEGYGMLGQAGSSKIRVFVAQMKLAAKVAKKFK---EKH-- 118
ANR FG EE ++ LG G LG++GS ++R A+++K + +K
Sbjct: 374 QANRMSFGEIEEDAYQEDLGFSLGHLGKSGSGRVRQTQVNEATKARISKTLQRTLQKQSV 433
Query: 119 -YGSS----DATSGRKSRLAFTPVQWLELSIPQAHAQQLGSGSQSTYFS 162
YG D +SG S +AFTP+Q LE+ PQA +++ +Q YFS
Sbjct: 434 VYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQK-YFS 481
>UNIPROTKB|F1RNI3 [details] [associations]
symbol:PRPF31 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0070990 "snRNP
binding" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA] [GO:0005687 "U4 snRNP" evidence=IEA]
[GO:0000244 "assembly of spliceosomal tri-snRNP" evidence=IEA]
InterPro:IPR027105 Pfam:PF01798 GO:GO:0016607 GO:GO:0000244
GO:GO:0015030 GO:GO:0071339 GO:GO:0046540 GO:GO:0005687
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
GeneTree:ENSGT00550000075069 KO:K12844 OMA:VESDPEY
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 GO:GO:0070990
EMBL:FP476135 RefSeq:XP_003127461.2 Ensembl:ENSSSCT00000003624
GeneID:100520791 KEGG:ssc:100520791 Uniprot:F1RNI3
Length = 499
Score = 239 (89.2 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 59/169 (34%), Positives = 85/169 (50%)
Query: 4 GTVGRSFREEIRNKIEKWQEPSPAKRPKPLPVPDSEPXXXXXXXXXXXXXXXYAVTDMRK 63
G VG ++EI K +KWQEP P K+ KPLP P +T++RK
Sbjct: 314 GKVGYELKDEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRYRKMKERLGLTEIRK 373
Query: 64 LANRTQFGVAEESSFVNGLGEGYGMLGQAGSSKIRVFVAQMKLAAKVAKKFK---EKH-- 118
ANR FG EE ++ LG G LG++GS ++R A+++K + +K
Sbjct: 374 QANRMSFGEIEEDAYQEDLGFSLGHLGKSGSGRVRQTQVNEATKARISKTLQRTLQKQSV 433
Query: 119 -YGSS----DATSGRKSRLAFTPVQWLELSIPQAHAQQLGSGSQSTYFS 162
YG D +SG S +AFTP+Q LE+ PQA +++ +Q YFS
Sbjct: 434 VYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQK-YFS 481
>MGI|MGI:1916238 [details] [associations]
symbol:Prpf31 "PRP31 pre-mRNA processing factor 31 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000244 "assembly of
spliceosomal tri-snRNP" evidence=ISO;ISA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0005687 "U4 snRNP"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal body"
evidence=ISA] [GO:0016607 "nuclear speck" evidence=ISA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0043021
"ribonucleoprotein complex binding" evidence=ISA] [GO:0046540
"U4/U6 x U5 tri-snRNP complex" evidence=ISA] [GO:0070990 "snRNP
binding" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR027105 MGI:MGI:1916238 Pfam:PF01798 GO:GO:0016607
GO:GO:0005681 GO:GO:0000244 GO:GO:0003723 GO:GO:0015030
GO:GO:0043021 GO:GO:0071339 GO:GO:0046540 GO:GO:0005687
EMBL:AC130680 eggNOG:COG1498 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 PROSITE:PS51358 CTD:26121
GeneTree:ENSGT00550000075069 HOVERGEN:HBG082193 KO:K12844
OMA:VESDPEY OrthoDB:EOG4W6NW1 InterPro:IPR019175 PANTHER:PTHR13904
Pfam:PF09785 GO:GO:0070990 EMBL:AY040823 EMBL:AK005294
EMBL:AK033190 EMBL:AK033283 EMBL:AK044398 EMBL:AK044457
EMBL:AK051260 EMBL:CT010189 EMBL:BC018376 EMBL:BC057877
EMBL:BC061461 IPI:IPI00331424 IPI:IPI00459791 IPI:IPI00625183
IPI:IPI00742282 IPI:IPI00742413 RefSeq:NP_001153186.1
RefSeq:NP_081604.3 UniGene:Mm.246863 ProteinModelPortal:Q8CCF0
SMR:Q8CCF0 STRING:Q8CCF0 PhosphoSite:Q8CCF0 PaxDb:Q8CCF0
PRIDE:Q8CCF0 DNASU:68988 Ensembl:ENSMUST00000008517
Ensembl:ENSMUST00000108636 Ensembl:ENSMUST00000179769 GeneID:68988
KEGG:mmu:68988 UCSC:uc009evi.2 UCSC:uc012ewf.1 InParanoid:Q8CCF0
NextBio:328355 Bgee:Q8CCF0 Genevestigator:Q8CCF0
GermOnline:ENSMUSG00000008373 Uniprot:Q8CCF0
Length = 499
Score = 239 (89.2 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 59/169 (34%), Positives = 85/169 (50%)
Query: 4 GTVGRSFREEIRNKIEKWQEPSPAKRPKPLPVPDSEPXXXXXXXXXXXXXXXYAVTDMRK 63
G VG ++EI K +KWQEP P K+ KPLP P +T++RK
Sbjct: 314 GKVGYELKDEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRYRKMKERLGLTEIRK 373
Query: 64 LANRTQFGVAEESSFVNGLGEGYGMLGQAGSSKIRVFVAQMKLAAKVAKKFK---EKH-- 118
ANR FG EE ++ LG G LG++GS ++R A+++K + +K
Sbjct: 374 QANRMSFGEIEEDAYQEDLGFSLGHLGKSGSGRVRQTQVNEATKARISKTLQRTLQKQSV 433
Query: 119 -YGSS----DATSGRKSRLAFTPVQWLELSIPQAHAQQLGSGSQSTYFS 162
YG D +SG S +AFTP+Q LE+ PQA +++ +Q YFS
Sbjct: 434 VYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQK-YFS 481
>UNIPROTKB|Q6NVP6 [details] [associations]
symbol:prpf31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0071339 "MLL1
complex" evidence=ISS] InterPro:IPR027105 Pfam:PF01798
GO:GO:0005681 GO:GO:0003723 GO:GO:0060041 GO:GO:0000398
GO:GO:0071339 eggNOG:COG1498 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 PROSITE:PS51358 CTD:26121
GeneTree:ENSGT00550000075069 HOVERGEN:HBG082193 KO:K12844
OrthoDB:EOG4W6NW1 InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785
HOGENOM:HOG000207983 EMBL:BC067959 RefSeq:NP_998859.1
UniGene:Str.66282 ProteinModelPortal:Q6NVP6 SMR:Q6NVP6
STRING:Q6NVP6 Ensembl:ENSXETT00000023852 GeneID:407890
KEGG:xtr:407890 Xenbase:XB-GENE-489336 InParanoid:Q6NVP6
OMA:ESTEGKX Bgee:Q6NVP6 Uniprot:Q6NVP6
Length = 498
Score = 237 (88.5 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 60/169 (35%), Positives = 84/169 (49%)
Query: 4 GTVGRSFREEIRNKIEKWQEPSPAKRPKPLPVPDSEPXXXXXXXXXXXXXXXYAVTDMRK 63
G VG +EEI K +KWQEP P K+ KPLP P +T++RK
Sbjct: 313 GKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRYRKMKERLGLTEIRK 372
Query: 64 LANRTQFGVAEESSFVNGLGEGYGMLGQAGSSKIRVFVAQMKLAAKVAKKFK---EKH-- 118
ANR F EE ++ LG G LG++GS +IR A+++K + +K
Sbjct: 373 QANRMSFAEIEEDAYQEDLGFSLGHLGKSGSGRIRQAQVNEATKARISKTLQRTLQKQSV 432
Query: 119 -YGSS----DATSGRKSRLAFTPVQWLELSIPQAHAQQLGSGSQSTYFS 162
YG D +SG S +AFTP+Q LE+ PQA +++ +Q YFS
Sbjct: 433 VYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQK-YFS 480
>ZFIN|ZDB-GENE-040426-1561 [details] [associations]
symbol:prpf31 "PRP31 pre-mRNA processing factor 31
homolog (yeast)" species:7955 "Danio rerio" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA;IMP] [GO:0000244 "assembly of
spliceosomal tri-snRNP" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IMP] [GO:0071339 "MLL1
complex" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR027105 Pfam:PF01798
ZFIN:ZDB-GENE-040426-1561 GO:GO:0005681 GO:GO:0003723 GO:GO:0060041
GO:GO:0000398 GO:GO:0071339 eggNOG:COG1498 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08060 SMART:SM00931 PROSITE:PS51358
EMBL:BC055531 IPI:IPI00508030 RefSeq:NP_956798.1 UniGene:Dr.76439
ProteinModelPortal:Q7SXM7 SMR:Q7SXM7 STRING:Q7SXM7 PRIDE:Q7SXM7
Ensembl:ENSDART00000137029 GeneID:393476 KEGG:dre:393476 CTD:26121
GeneTree:ENSGT00550000075069 HOGENOM:HOG000202033
HOVERGEN:HBG082193 InParanoid:Q7SXM7 KO:K12844 OMA:VESDPEY
OrthoDB:EOG4W6NW1 NextBio:20814506 ArrayExpress:Q7SXM7 Bgee:Q7SXM7
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 Uniprot:Q7SXM7
Length = 508
Score = 235 (87.8 bits), Expect = 5.2e-19, P = 5.2e-19
Identities = 58/169 (34%), Positives = 84/169 (49%)
Query: 4 GTVGRSFREEIRNKIEKWQEPSPAKRPKPLPVPDSEPXXXXXXXXXXXXXXXYAVTDMRK 63
G VG +EEI K +KWQEP P K+ KPLP P +T++RK
Sbjct: 325 GKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRYRKMKERLGLTEIRK 384
Query: 64 LANRTQFGVAEESSFVNGLGEGYGMLGQAGSSKIRVFVAQMKLAAKVAKKFK---EKH-- 118
ANR F E+ ++ LG G LG++GS ++R A+++K + +K
Sbjct: 385 HANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRVRQAQVNDSTKARISKSLQRTLQKQSM 444
Query: 119 -YGSS----DATSGRKSRLAFTPVQWLELSIPQAHAQQLGSGSQSTYFS 162
YG D +SG S +AFTP+Q LE+ PQA +++ +Q YFS
Sbjct: 445 TYGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQAAEKKVAEANQK-YFS 492
>FB|FBgn0036487 [details] [associations]
symbol:Prp31 species:7227 "Drosophila melanogaster"
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;ISS] [GO:0000244 "assembly
of spliceosomal tri-snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR027105 Pfam:PF01798 EMBL:AE014296 GO:GO:0022008
GO:GO:0071011 GO:GO:0000398 eggNOG:COG1498 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
GeneTree:ENSGT00550000075069 KO:K12844 OMA:VESDPEY
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 HSSP:O28191
EMBL:AY051928 RefSeq:NP_648756.1 UniGene:Dm.9673 SMR:Q9VUM1
STRING:Q9VUM1 EnsemblMetazoa:FBtr0075642 GeneID:39655
KEGG:dme:Dmel_CG6876 UCSC:CG6876-RA CTD:39655 FlyBase:FBgn0036487
InParanoid:Q9VUM1 OrthoDB:EOG4JWSVZ GenomeRNAi:39655 NextBio:814716
Uniprot:Q9VUM1
Length = 501
Score = 231 (86.4 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 57/168 (33%), Positives = 86/168 (51%)
Query: 4 GTVGRSFREEIRNKIEKWQEPSPAKRPKPLPVPDSEPXXXXXXXXXXXXXXXYAVTDMRK 63
G +G F+E++ K++K QEP P K KPLP P YA+T+ RK
Sbjct: 322 GEIGLRFKEDVEKKLDKLQEPPPVKFIKPLPKPIEGSKKKRGGKRVRKMKERYALTEFRK 381
Query: 64 LANRTQFGVAEESSFVNGLGEGYGMLGQAGSSKIRVFVAQMKLAAKVAKKF-----KEKH 118
ANR FG EE ++ LG G +G+ G+ +IR+ K +++K K++
Sbjct: 382 QANRMNFGDIEEDAYQGDLGYSRGTIGKTGTGRIRLPQVDEKTKVRISKTLHKNLQKQQV 441
Query: 119 YGSSDAT----SGRKSRLAFTPVQWLELSIPQAHAQQLGSGSQSTYFS 162
YG + SG S +AFTP+Q LE+ PQA A++ + + + YFS
Sbjct: 442 YGGNTTVKRQISGTASSVAFTPLQGLEIVNPQA-AERSQTEANAKYFS 488
>UNIPROTKB|E7EVX8 [details] [associations]
symbol:PRPF31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:9606 "Homo sapiens" [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] InterPro:IPR027105 Pfam:PF01798 EMBL:AC012314
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 HGNC:HGNC:15446
IPI:IPI00657721 ProteinModelPortal:E7EVX8 SMR:E7EVX8 PRIDE:E7EVX8
Ensembl:ENST00000391755 ArrayExpress:E7EVX8 Bgee:E7EVX8
Uniprot:E7EVX8
Length = 493
Score = 226 (84.6 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 56/162 (34%), Positives = 82/162 (50%)
Query: 11 REEIRNKIEKWQEPSPAKRPKPLPVPDSEPXXXXXXXXXXXXXXXYAVTDMRKLANRTQF 70
++EI K +KWQEP P K+ KPLP P +T++RK ANR F
Sbjct: 315 KDEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRYRKMKERLGLTEIRKQANRMSF 374
Query: 71 GVAEESSFVNGLGEGYGMLGQAGSSKIRVFVAQMKLAAKVAKKFK---EKH---YGSS-- 122
G EE ++ LG G LG++GS ++R A+++K + +K YG
Sbjct: 375 GEIEEDAYQEDLGFSLGHLGKSGSGRVRQTQVNEATKARISKTLQRTLQKQSVVYGGKST 434
Query: 123 --DATSGRKSRLAFTPVQWLELSIPQAHAQQLGSGSQSTYFS 162
D +SG S +AFTP+Q LE+ PQA +++ +Q YFS
Sbjct: 435 IRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQK-YFS 475
>ASPGD|ASPL0000059636 [details] [associations]
symbol:AN1260 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR027105 Pfam:PF01798 EMBL:BN001308
EMBL:AACD01000017 eggNOG:COG1498 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08060 SMART:SM00931 KO:K12844
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785
HOGENOM:HOG000207983 OMA:RDHYSIR OrthoDB:EOG4ZCXDV
RefSeq:XP_658864.1 ProteinModelPortal:Q5BDX0 STRING:Q5BDX0
EnsemblFungi:CADANIAT00001363 GeneID:2877039 KEGG:ani:AN1260.2
Uniprot:Q5BDX0
Length = 521
Score = 179 (68.1 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 44/134 (32%), Positives = 63/134 (47%)
Query: 2 PSGTVGRSFREEIRNKIEKWQEPSPAKRPKPLPVPDSEPXXXXXXXXXXXXXXXYAVTDM 61
P G++G +++ ++EK EP P K LP PD +P A+T++
Sbjct: 272 PDGSLGEDLKQQCFQRLEKLTEPPPNSGTKALPAPDDKPSRKRGGRRARKAKEAVAMTEL 331
Query: 62 RKLANRTQFGVAEESSFVNGLGEG---YGMLGQAGSSKIRVFVAQMKLAAKVAKKFKEKH 118
RK NR FG EE+ G GEG GMLGQ +IR + AK++K K
Sbjct: 332 RKAQNRVAFG-KEEAEVGYGTGEGTVGLGMLGQQNDGRIRATQIDQRTRAKLSKS--NKG 388
Query: 119 YGSSDATSGRKSRL 132
+G++ SG S L
Sbjct: 389 WGAATPISGTASSL 402
>WB|WBGene00022458 [details] [associations]
symbol:prp-31 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0001703 "gastrulation with mouth forming first" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0018996 "molting cycle,
collagen and cuticulin-based cuticle" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR027105 Pfam:PF01798
GO:GO:0009792 GO:GO:0002009 GO:GO:0016477 GO:GO:0008406
GO:GO:0018996 GO:GO:0042127 EMBL:FO080728 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 GO:GO:0001703 eggNOG:COG1498
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
GeneTree:ENSGT00550000075069 KO:K12844 OMA:VESDPEY
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785
HOGENOM:HOG000207983 RefSeq:NP_491527.1 ProteinModelPortal:Q9N592
SMR:Q9N592 STRING:Q9N592 PaxDb:Q9N592 EnsemblMetazoa:Y110A7A.8
GeneID:172146 KEGG:cel:CELE_Y110A7A.8 UCSC:Y110A7A.8.2 CTD:172146
WormBase:Y110A7A.8 InParanoid:Q9N592 NextBio:874215 Uniprot:Q9N592
Length = 504
Score = 175 (66.7 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 54/174 (31%), Positives = 72/174 (41%)
Query: 3 SGTVGRSFREEIRNKIEKWQEPSPAKRPKPLPVPDSEPXXXXXXXXXXXXXXXYAVTDMR 62
+G G F + +K EK EP P K K LP P + +TD+R
Sbjct: 322 NGEKGAEFLALVESKFEKMLEPPPVKANKALPKPLDKASKKRGGRRTRKMKERLGMTDLR 381
Query: 63 KLANRTQFGVAEESSFVNGLGEGYGML--GQAGSSKIRVFVAQMKLAAKVAKKFK---EK 117
K ANR FG E +G G + G +IR K A++++K E+
Sbjct: 382 KSANRMNFGELGEDVMQEHMGFDIGQVKTGNVTGGRIRTAAVDQKTRARMSQKMMRQMER 441
Query: 118 HYGSSDATS------GRKSRLAFTPVQWLELSIPQAHAQQLGSGSQSTYFSQKG 165
+ TS G S + FTP+Q LE+ P A QQ S S S YFS G
Sbjct: 442 QKAAGGMTSIRSKMAGTASSVTFTPIQGLEIINPAAQEQQQCS-STSNYFSSSG 494
>GENEDB_PFALCIPARUM|PFD0450c [details] [associations]
symbol:PFD0450c "pre-mrna splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] InterPro:IPR027105 Pfam:PF01798 GO:GO:0008380
GO:GO:0005681 EMBL:AL844503 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 KO:K12844 InterPro:IPR019175
PANTHER:PTHR13904 Pfam:PF09785 HOGENOM:HOG000207983
RefSeq:XP_002808648.1 EnsemblProtists:PFD0450c:mRNA GeneID:812409
KEGG:pfa:PFD0450c EuPathDB:PlasmoDB:PF3D7_0409100
ProtClustDB:CLSZ2433500 Uniprot:C0H4A0
Length = 534
Score = 152 (58.6 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 49/162 (30%), Positives = 69/162 (42%)
Query: 1 YPSGTVGRSFREEIRNKIEKWQEPSPAKRPKPLPVPDSEPXXXXXXXXXXXXXXXYAVTD 60
Y G G R+ I + + K QEP P K+ K LP+PD + +T+
Sbjct: 371 YKEGQYGLLLRQYIISHLIKLQEPPPLKQKKILPMPDEKRKRKRGGKRYRKLKEKTQITE 430
Query: 61 MRKLANRTQFGVAEESSFVNGLGEGYGMLGQAGSSKIRVFVAQMKLAAKVAKKFKEKHYG 120
+ K NR FG F N + ML + +K++ Q L K K+ H
Sbjct: 431 LTKQINRLPFGPETTDDFYN-FNDQNTMLLNSNITKLKYTNKQKNLITK--KRNLNVH-- 485
Query: 121 SSDATSGRKSRLAFTPVQWLELSIPQAHAQQLGSGSQSTYFS 162
SS AT G S L FTP+Q +EL P +++ YFS
Sbjct: 486 SSGATGGLSSSLIFTPLQGIELYNPSL-INAKNKQTENKYFS 526
>UNIPROTKB|C0H4A0 [details] [associations]
symbol:PFD0450c "Pre-mRNA splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR027105 Pfam:PF01798 GO:GO:0008380 GO:GO:0005681
EMBL:AL844503 InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060
SMART:SM00931 KO:K12844 InterPro:IPR019175 PANTHER:PTHR13904
Pfam:PF09785 HOGENOM:HOG000207983 RefSeq:XP_002808648.1
EnsemblProtists:PFD0450c:mRNA GeneID:812409 KEGG:pfa:PFD0450c
EuPathDB:PlasmoDB:PF3D7_0409100 ProtClustDB:CLSZ2433500
Uniprot:C0H4A0
Length = 534
Score = 152 (58.6 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 49/162 (30%), Positives = 69/162 (42%)
Query: 1 YPSGTVGRSFREEIRNKIEKWQEPSPAKRPKPLPVPDSEPXXXXXXXXXXXXXXXYAVTD 60
Y G G R+ I + + K QEP P K+ K LP+PD + +T+
Sbjct: 371 YKEGQYGLLLRQYIISHLIKLQEPPPLKQKKILPMPDEKRKRKRGGKRYRKLKEKTQITE 430
Query: 61 MRKLANRTQFGVAEESSFVNGLGEGYGMLGQAGSSKIRVFVAQMKLAAKVAKKFKEKHYG 120
+ K NR FG F N + ML + +K++ Q L K K+ H
Sbjct: 431 LTKQINRLPFGPETTDDFYN-FNDQNTMLLNSNITKLKYTNKQKNLITK--KRNLNVH-- 485
Query: 121 SSDATSGRKSRLAFTPVQWLELSIPQAHAQQLGSGSQSTYFS 162
SS AT G S L FTP+Q +EL P +++ YFS
Sbjct: 486 SSGATGGLSSSLIFTPLQGIELYNPSL-INAKNKQTENKYFS 526
>UNIPROTKB|E7ESA8 [details] [associations]
symbol:PRPF31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:9606 "Homo sapiens" [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] InterPro:IPR027105 Pfam:PF01798 EMBL:AC012314
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 IPI:IPI00738596
HGNC:HGNC:15446 ProteinModelPortal:E7ESA8 SMR:E7ESA8 PRIDE:E7ESA8
Ensembl:ENST00000419967 UCSC:uc010yek.1 ArrayExpress:E7ESA8
Bgee:E7ESA8 Uniprot:E7ESA8
Length = 450
Score = 150 (57.9 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 33/89 (37%), Positives = 42/89 (47%)
Query: 4 GTVGRSFREEIRNKIEKWQEPSPAKRPKPLPVPDSEPXXXXXXXXXXXXXXXYAVTDMRK 63
G VG ++EI K +KWQEP P K+ KPLP P +T++RK
Sbjct: 314 GKVGYELKDEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRYRKMKERLGLTEIRK 373
Query: 64 LANRTQFGVAEESSFVNGLGEGYGMLGQA 92
ANR FG EE ++ LG G L A
Sbjct: 374 QANRMSFGEIEEDAYQEDLGFSLGHLDAA 402
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.128 0.369 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 165 150 0.00087 104 3 11 23 0.40 32
30 0.39 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 565 (60 KB)
Total size of DFA: 132 KB (2084 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.20u 0.08s 14.28t Elapsed: 00:00:01
Total cpu time: 14.20u 0.08s 14.28t Elapsed: 00:00:01
Start: Sat May 11 11:34:05 2013 End: Sat May 11 11:34:06 2013