BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047530
(72 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SK08|LBD11_ARATH LOB domain-containing protein 11 OS=Arabidopsis thaliana GN=LBD11
PE=2 SV=2
Length = 232
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 48/51 (94%)
Query: 22 VVLSPCAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFLQ 72
VVLSPCAACKILRRRC +KCVLAPYFPPT+P KF IAHRVFGASNIIKFLQ
Sbjct: 51 VVLSPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQ 101
>sp|Q9LQR0|LBD1_ARATH LOB domain-containing protein 1 OS=Arabidopsis thaliana GN=LBD1
PE=2 SV=1
Length = 190
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 48/51 (94%)
Query: 22 VVLSPCAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFLQ 72
VVLSPCAACKILRRRC E+CVLAPYFPPT+P KF IAHRVFGASNIIKFLQ
Sbjct: 29 VVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQ 79
>sp|O64836|LBD10_ARATH LOB domain-containing protein 10 OS=Arabidopsis thaliana GN=LBD10
PE=2 SV=1
Length = 311
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 25 SPCAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFL 71
+PCAACK+LRR+C ++CV APYFPPT PQKF+ HRVFGASN+ K L
Sbjct: 4 TPCAACKLLRRKCTQECVFAPYFPPTNPQKFIFVHRVFGASNVTKIL 50
>sp|Q8LBW3|LBD12_ARATH LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12
PE=2 SV=2
Length = 193
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 39/48 (81%)
Query: 25 SPCAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFLQ 72
SPCA+CK+LRRRC + C+ APYFPP +P KF I H+VFGASN+ K LQ
Sbjct: 7 SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQ 54
>sp|Q9SHE9|LBD4_ARATH LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4
PE=2 SV=1
Length = 172
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 38/48 (79%)
Query: 25 SPCAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFLQ 72
SPCAACK+LRRRC + CV +PYFP EPQKF HRVFGASN+ K LQ
Sbjct: 12 SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQ 59
>sp|Q9FKZ3|LBD36_ARATH LOB domain-containing protein 36 OS=Arabidopsis thaliana GN=LBD36
PE=2 SV=1
Length = 313
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 38/47 (80%)
Query: 25 SPCAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFL 71
SPCAACK LRR+C ++CV APYFPP +PQKF H+VFGASN+ K L
Sbjct: 6 SPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLL 52
>sp|Q32SG3|LBD6_MAIZE LOB domain-containing protein 6 OS=Zea mays GN=LBD6 PE=1 SV=1
Length = 260
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 36/48 (75%)
Query: 25 SPCAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFLQ 72
SPCAACK LRR+C CV APYFPP PQKFV HRVFGASN+ K L
Sbjct: 32 SPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLN 79
>sp|Q8LQH4|LBD6_ORYSJ LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica
GN=LBD6 PE=2 SV=1
Length = 269
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 36/48 (75%)
Query: 25 SPCAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFLQ 72
SPCAACK LRR+C CV APYFPP PQKFV HRVFGASN+ K L
Sbjct: 37 SPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLN 84
>sp|A2WXT0|LBD6_ORYSI LOB domain-containing protein 6 OS=Oryza sativa subsp. indica
GN=LBD6 PE=3 SV=1
Length = 269
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 36/48 (75%)
Query: 25 SPCAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFLQ 72
SPCAACK LRR+C CV APYFPP PQKFV HRVFGASN+ K L
Sbjct: 37 SPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLN 84
>sp|A1YKY7|IAL1_MAIZE Protein IAL1 OS=Zea mays PE=2 SV=1
Length = 269
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 36/48 (75%)
Query: 25 SPCAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFLQ 72
SPCAACK LRR+C CV APYFPP PQKFV HRVFGASN+ K +
Sbjct: 32 SPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVRVHRVFGASNVTKLMN 79
>sp|O04479|LBD6_ARATH LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6
PE=1 SV=1
Length = 199
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 37/48 (77%)
Query: 25 SPCAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFLQ 72
SPCAACK LRR+C +CV APYFPP +PQKF H+VFGASN+ K L
Sbjct: 8 SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLN 55
>sp|Q8L8Q3|LBD25_ARATH LOB domain-containing protein 25 OS=Arabidopsis thaliana GN=LBD25
PE=2 SV=3
Length = 159
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 35/48 (72%)
Query: 25 SPCAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFLQ 72
SPCAACK LRR+C CV APYFPP EP KF HR+FGASN+ K L
Sbjct: 38 SPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILH 85
>sp|Q9FML4|LOB_ARATH Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana GN=LOB
PE=2 SV=1
Length = 186
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 36/48 (75%)
Query: 25 SPCAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFLQ 72
SPCAACK LRR+C+ C+ APYFPP EP KF H++FGASN+ K L
Sbjct: 10 SPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLN 57
>sp|Q9AT61|LBD13_ARATH LOB domain-containing protein 13 OS=Arabidopsis thaliana GN=LBD13
PE=2 SV=2
Length = 268
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
Query: 19 PPPVVL---SPCAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFL 71
PP L +PCAACK+LRRRC E+C +PYF P EP KF H+VFGASN+ K L
Sbjct: 42 PPGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKML 97
>sp|Q9SA51|LBD3_ARATH LOB domain-containing protein 3 OS=Arabidopsis thaliana GN=LBD3
PE=2 SV=1
Length = 165
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 23 VLSPCAACKILRRRCV-EKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFLQ 72
+SPCA CK+LRR+CV + CV APYFP EP KF I H++FGASN+ K LQ
Sbjct: 11 TVSPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQ 61
>sp|Q8L5T5|LBD15_ARATH LOB domain-containing protein 15 OS=Arabidopsis thaliana GN=LBD15
PE=2 SV=2
Length = 224
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Query: 15 PQSPPPPVV--LSPCAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFL 71
P S PP + ++PCAACK+LRRRC ++C +PYF P EP KF H+VFGASN+ K L
Sbjct: 32 PMSGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKML 90
>sp|P59468|LBD24_ARATH LOB domain-containing protein 24 OS=Arabidopsis thaliana GN=LBD24
PE=2 SV=1
Length = 121
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 35/46 (76%)
Query: 27 CAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFLQ 72
CAACK LRRRC + CV +PYFPP +PQKF HR++GA N+ K LQ
Sbjct: 6 CAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQ 51
>sp|P59467|LBD23_ARATH LOB domain-containing protein 23 OS=Arabidopsis thaliana GN=LBD23
PE=2 SV=1
Length = 121
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 35/46 (76%)
Query: 27 CAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFLQ 72
CAACK LRRRC + CV +PYFPP +PQKF HR++GA N+ K LQ
Sbjct: 6 CAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQ 51
>sp|Q9SCS4|LBD28_ARATH LOB domain-containing protein 28 OS=Arabidopsis thaliana GN=LBD28
PE=2 SV=1
Length = 198
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 23 VLSPCAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFL 71
+ +PCAACK LRR+C E CV APYFP T+ + H+VFGAS++ +
Sbjct: 9 ISTPCAACKHLRRKCTEDCVFAPYFPSTKLDNYEAVHKVFGASHVATLI 57
>sp|Q9STS6|LBD27_ARATH LOB domain-containing protein 27 OS=Arabidopsis thaliana GN=LBD27
PE=2 SV=1
Length = 328
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 27 CAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFLQ 72
CAACK RRRC C LAPYFP +P+ F HR+FG +I+K L+
Sbjct: 37 CAACKYQRRRCAADCPLAPYFPAEQPKLFQNVHRLFGVRSIVKILE 82
>sp|Q9SRV3|LBD20_ARATH LOB domain-containing protein 20 OS=Arabidopsis thaliana GN=LBD20
PE=2 SV=1
Length = 273
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 4 SSSQSSPSFAAPQSPPPPVVLSPCAACKILRRRCVEKCVLAPYFPPTE-PQKFVIAHRVF 62
+SS SS + + SPC ACK LRR+CV C+ AP+F + +F H+VF
Sbjct: 29 TSSLSSGGVSMAAATTGTGTASPCGACKFLRRKCVSGCIFAPHFGSDQGAARFAAVHKVF 88
Query: 63 GASNIIKFLQ 72
GASN+ K L
Sbjct: 89 GASNVSKLLH 98
>sp|Q9SLB7|LBD16_ARATH LOB domain-containing protein 16 OS=Arabidopsis thaliana GN=LBD16
PE=2 SV=1
Length = 245
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 25 SPCAACKILRRRCVEKCVLAPYFPPTEP-QKFVIAHRVFGASNIIKFL 71
SPC ACK LRR+C C+ APYF + +F H+VFGASN+ K L
Sbjct: 14 SPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLL 61
>sp|O81322|LBD31_ARATH LOB domain-containing protein 31 OS=Arabidopsis thaliana GN=LBD31
PE=2 SV=2
Length = 220
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 25 SPCAACKILRRRCVEKCVLAPYFPPTE-PQKFVIAHRVFGASNIIKFL 71
PC ACK LRR+CV CV APYF E F H+VFGASN K L
Sbjct: 10 GPCGACKFLRRKCVADCVFAPYFDSVEGTSHFTAVHKVFGASNASKLL 57
>sp|Q9SSM9|LBD7_ARATH LOB domain-containing protein 7 OS=Arabidopsis thaliana GN=LBD7
PE=2 SV=1
Length = 214
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 25 SPCAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFLQ 72
+ CAACK R++C + C+LA YFP KF+ AH++FG SNI K L+
Sbjct: 12 TACAACKHQRKKCKKNCILARYFPQDGTNKFLNAHKLFGVSNITKMLK 59
>sp|Q9LRW1|LBD22_ARATH LOB domain-containing protein 22 OS=Arabidopsis thaliana GN=LBD22
PE=2 SV=1
Length = 268
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 27 CAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFLQ 72
CAACK RR+C C+LAPYFP ++F+ AH++FG SNI K ++
Sbjct: 37 CAACKYQRRKCAPDCLLAPYFPHDRHRQFLNAHKLFGVSNITKIIK 82
>sp|Q9SRL8|LBD21_ARATH LOB domain-containing protein 21 OS=Arabidopsis thaliana GN=LBD21
PE=2 SV=1
Length = 165
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%)
Query: 25 SPCAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFL 71
S CAACK+L+RRC C+ APYF ++ F H+VFGASN+ K L
Sbjct: 10 SSCAACKLLKRRCTPTCIFAPYFRSSDLITFAKVHKVFGASNVSKLL 56
>sp|Q9SJW5|LBD14_ARATH LOB domain-containing protein 14 OS=Arabidopsis thaliana GN=LBD14
PE=2 SV=1
Length = 188
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 25 SPCAACKILRRRCVEKCVLAPYFPPTEP-QKFVIAHRVFGASNIIKFL 71
SPC CK LRR+CVE CV APYF E F H+VFGASN K +
Sbjct: 6 SPCGGCKFLRRKCVEGCVFAPYFCYEEGSSNFAAIHKVFGASNFSKLI 53
>sp|Q9SLB6|LBD17_ARATH LOB domain-containing protein 17 OS=Arabidopsis thaliana GN=LBD17
PE=2 SV=1
Length = 244
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/48 (58%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 25 SPCAACKILRRRCVEKCVLAPYFPPTE-PQKFVIAHRVFGASNIIKFL 71
SPC ACK LRRRCV+ CV APYF + F H+VFGASN K L
Sbjct: 6 SPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLL 53
>sp|Q9LHS8|LBD33_ARATH LOB domain-containing protein 33 OS=Arabidopsis thaliana GN=LBD33
PE=2 SV=1
Length = 177
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 25 SPCAACKILRRRCVEKCVLAPYFPPTE-PQKFVIAHRVFGASNIIKFL 71
S C ACK LRR+C CV +PYF + F H+VFGASN+ K L
Sbjct: 6 SSCGACKFLRRKCNRDCVFSPYFSYEQASSHFAAVHKVFGASNVSKHL 53
>sp|Q9LNB9|LBD2_ARATH LOB domain-containing protein 2 OS=Arabidopsis thaliana GN=LBD2
PE=2 SV=2
Length = 206
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 27 CAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFLQ 72
CA+CK R++C +C+L+PYFP + ++F H+VFG SN+ K ++
Sbjct: 25 CASCKHQRKKCNNECILSPYFPARKTKEFQAVHKVFGVSNVQKMVR 70
>sp|Q9M2J7|LBD29_ARATH LOB domain-containing protein 29 OS=Arabidopsis thaliana GN=LBD29
PE=2 SV=1
Length = 218
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 26 PCAACKILRRRCVEKCVLAPYFPPTE-PQKFVIAHRVFGASNIIKFL 71
PC ACK LRR+C + CV APYF + F H+VFGASN K L
Sbjct: 11 PCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLL 57
>sp|O82198|LBD9_ARATH LOB domain-containing protein 9 OS=Arabidopsis thaliana GN=LBD9
PE=2 SV=1
Length = 124
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 22 VVLSPCAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFLQ 72
V +PCA C +RC +KC APYFP ++ AH++FG SNIIK ++
Sbjct: 8 VKRAPCALCTTKNKRCPKKCDFAPYFPAERKGEYENAHKLFGTSNIIKMMR 58
>sp|O81323|LBD30_ARATH LOB domain-containing protein 30 OS=Arabidopsis thaliana GN=LBD30
PE=2 SV=1
Length = 228
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 29 ACKILRRRCVEKCVLAPYFPPTEP-QKFVIAHRVFGASNIIKFLQ 72
ACK LRR+CV C+ APYF + F H+VFGASN+ K L
Sbjct: 20 ACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLH 64
>sp|O22132|LBD19_ARATH LOB domain-containing protein 19 OS=Arabidopsis thaliana GN=LBD19
PE=2 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 29 ACKILRRRCVEKCVLAPYFPPTEPQ-KFVIAHRVFGASNIIKFL 71
ACK LRR+CV+ CV APYF + +F H+VFGASN K L
Sbjct: 19 ACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASKML 62
>sp|O22131|LBD18_ARATH LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18
PE=2 SV=2
Length = 262
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 29 ACKILRRRCVEKCVLAPYFPPTEPQKFVIA-HRVFGASNIIKFL 71
ACK LRR+CV C+ APYF + + A H+VFGASN+ K L
Sbjct: 40 ACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLL 83
>sp|Q9FFL3|LBD35_ARATH LOB domain-containing protein 35 OS=Arabidopsis thaliana GN=LBD35
PE=2 SV=1
Length = 206
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 27 CAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFL 71
C+ACK+++ C C+ AP+FP T + F HR+FGA N+ K L
Sbjct: 6 CSACKVMKCDCAPNCIFAPHFPLTNLETFERLHRIFGAGNVFKIL 50
>sp|Q9LIJ0|LBD26_ARATH LOB domain-containing protein 26 OS=Arabidopsis thaliana GN=LBD26
PE=2 SV=2
Length = 153
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 25 SPCAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFLQ 72
+PC C+ ++CV C+ A FP ++ +KF + +R+FG + +L+
Sbjct: 4 NPCEVCRFQNKQCVNNCMFALLFPSSDLEKFDVVNRIFGLETLTFYLK 51
>sp|P59469|LBD34_ARATH LOB domain-containing protein 34 OS=Arabidopsis thaliana GN=LBD34
PE=2 SV=1
Length = 141
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 24 LSPCAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFLQ 72
++ CAAC+ RRRC C PYFP Q+F HR+ + + K L+
Sbjct: 15 VNQCAACRHQRRRCTPDCFFRPYFPAERHQEFQNFHRLHSNTRLQKKLK 63
>sp|O49651|LBD32_ARATH LOB domain-containing protein 32 OS=Arabidopsis thaliana GN=LBD32
PE=2 SV=1
Length = 192
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 27 CAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFLQ 72
CA CKIL C C+ AP+FP + F + ++FGA N+ L
Sbjct: 6 CAVCKILNETCAPMCIYAPHFPSNDA-SFKVIIQIFGAVNVCNILD 50
>sp|Q9C8V8|LBD5_ARATH LOB domain-containing protein 5 OS=Arabidopsis thaliana GN=LBD5
PE=2 SV=1
Length = 122
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 26 PCAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFLQ 72
PC+ C R C C A YFP ++ A+ +FG NII +Q
Sbjct: 9 PCSVCITKNRNCPRFCEYAEYFPYELQSQYESANELFGTPNIITMMQ 55
>sp|Q9SN23|LBD38_ARATH LOB domain-containing protein 38 OS=Arabidopsis thaliana GN=LBD38
PE=2 SV=1
Length = 247
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Query: 27 CAACKILRRRCVEKCVLAPYF-----PPTEPQKFVIAHRVFGASNIIKFL 71
C C++LR+ C E C+L P P + V + FG + ++ F+
Sbjct: 3 CNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFI 52
>sp|Q9ZUP0|LBD8_ARATH LOB domain-containing protein 8 OS=Arabidopsis thaliana GN=LBD8
PE=2 SV=1
Length = 120
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 20/47 (42%)
Query: 26 PCAACKILRRRCVEKCVLAPYFPPTEPQKFVIAHRVFGASNIIKFLQ 72
PC C R C C A YFP + + +FG IIK ++
Sbjct: 9 PCCVCITKNRNCPRFCEYAEYFPYELRSHYESTNELFGTPKIIKMMR 55
>sp|Q9SZE8|LBD39_ARATH LOB domain-containing protein 39 OS=Arabidopsis thaliana GN=LBD39
PE=2 SV=1
Length = 240
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Query: 27 CAACKILRRRCVEKCVLAP---YFPPTEPQKF--VIAHRVFGASNIIKFL 71
C C++LR+ C E C+L P + E Q V + FG + ++ F+
Sbjct: 3 CNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFI 52
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.135 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,472,523
Number of Sequences: 539616
Number of extensions: 1019364
Number of successful extensions: 7353
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 7273
Number of HSP's gapped (non-prelim): 79
length of query: 72
length of database: 191,569,459
effective HSP length: 44
effective length of query: 28
effective length of database: 167,826,355
effective search space: 4699137940
effective search space used: 4699137940
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 55 (25.8 bits)