Query 047530
Match_columns 72
No_of_seqs 106 out of 195
Neff 3.1
Searched_HMMs 13730
Date Mon Mar 25 21:07:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047530.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/047530hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d3coqa1 g.38.1.1 (A:8-48) Gal4 40.2 6.9 0.0005 19.4 1.6 15 25-39 2-16 (41)
2 d1clda_ g.38.1.1 (A:) CD2-Lac9 36.8 7.4 0.00054 18.6 1.3 16 25-40 1-16 (33)
3 d2q0zx2 b.1.18.22 (X:209-322) 34.0 5.9 0.00043 23.8 0.8 13 41-53 35-47 (114)
4 d3alca_ g.38.1.1 (A:) Ethanol 30.6 13 0.00097 19.6 1.9 17 22-38 9-25 (65)
5 d1zmec1 g.38.1.1 (C:31-66) PUT 30.3 13 0.00095 18.2 1.7 14 26-39 3-16 (36)
6 d1dl0a_ g.3.6.2 (A:) J-atracot 30.1 5.8 0.00042 20.5 0.2 10 21-30 4-13 (37)
7 d1pyia1 g.38.1.1 (A:30-71) PPR 29.9 13 0.00092 18.5 1.6 15 25-39 3-17 (42)
8 d1qp9a1 g.38.1.1 (A:55-97) Hap 26.9 18 0.0013 18.0 1.9 17 23-39 6-22 (43)
9 d1i1ip_ d.92.1.5 (P:) Neurolys 25.9 5.5 0.0004 29.8 -0.5 24 42-65 343-368 (665)
10 d1r5ta_ c.97.1.1 (A:) mono-dom 25.6 14 0.001 22.6 1.6 23 21-43 89-112 (141)
11 d1wfpa_ g.80.1.1 (A:) Zinc fin 23.3 31 0.0023 19.7 2.7 18 14-31 15-32 (74)
12 d2d30a1 c.97.1.1 (A:1-124) mon 22.1 18 0.0013 21.6 1.5 19 23-41 82-101 (124)
13 d1s4bp_ d.92.1.5 (P:) Neurolys 21.4 7 0.00051 29.1 -0.7 24 42-65 332-357 (654)
14 d1uwza_ c.97.1.1 (A:) mono-dom 20.4 19 0.0014 21.6 1.3 20 23-42 82-102 (130)
No 1
>d3coqa1 g.38.1.1 (A:8-48) Gal4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=40.25 E-value=6.9 Score=19.35 Aligned_cols=15 Identities=20% Similarity=0.904 Sum_probs=11.5
Q ss_pred CCchhhhhhhhcCCC
Q 047530 25 SPCAACKILRRRCVE 39 (72)
Q Consensus 25 ~pCAACK~lRRrC~~ 39 (72)
.+|..|+..+.||..
T Consensus 2 ~AC~~Cr~rK~KCd~ 16 (41)
T d3coqa1 2 QACDICRLKKLKCSK 16 (41)
T ss_dssp CCCHHHHHHTCCCCC
T ss_pred cchHHHHHhCcccCC
Confidence 478888888888854
No 2
>d1clda_ g.38.1.1 (A:) CD2-Lac9 {Milk yeast (Kluyveromyces lactis) [TaxId: 28985]}
Probab=36.84 E-value=7.4 Score=18.63 Aligned_cols=16 Identities=25% Similarity=0.827 Sum_probs=12.6
Q ss_pred CCchhhhhhhhcCCCC
Q 047530 25 SPCAACKILRRRCVEK 40 (72)
Q Consensus 25 ~pCAACK~lRRrC~~~ 40 (72)
.+|..|+..+.||..+
T Consensus 1 rAC~~Cr~rK~kCd~~ 16 (33)
T d1clda_ 1 QACDACRKKKWKCSKT 16 (33)
T ss_dssp CCCHHHHHSCCCCCCC
T ss_pred CChHHHHHhcCccCcc
Confidence 3688999999999653
No 3
>d2q0zx2 b.1.18.22 (X:209-322) Protein pro2281 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.01 E-value=5.9 Score=23.80 Aligned_cols=13 Identities=38% Similarity=0.749 Sum_probs=9.9
Q ss_pred CccccCCCCCCch
Q 047530 41 CVLAPYFPPTEPQ 53 (72)
Q Consensus 41 C~fAPYFPa~~~~ 53 (72)
=++|||||..+.+
T Consensus 35 ~v~aP~fP~~K~E 47 (114)
T d2q0zx2 35 PVIAPLFPQKREE 47 (114)
T ss_dssp SCCCTTCSSCCCC
T ss_pred cEECCCCCCCCcc
Confidence 3789999987643
No 4
>d3alca_ g.38.1.1 (A:) Ethanol regulon transcriptional activator ALCR DNA-binding domain {Emericella nidulans, also known as Aspergillus nidulans [TaxId: 162425]}
Probab=30.55 E-value=13 Score=19.63 Aligned_cols=17 Identities=29% Similarity=0.659 Sum_probs=14.5
Q ss_pred CCCCCchhhhhhhhcCC
Q 047530 22 VVLSPCAACKILRRRCV 38 (72)
Q Consensus 22 ~~~~pCAACK~lRRrC~ 38 (72)
-...+|-.|+....||.
T Consensus 9 R~~~AC~~CR~rK~kCd 25 (65)
T d3alca_ 9 RQNHSCDPCRKGKRRCD 25 (65)
T ss_dssp SSCCSCHHHHHTTCCCS
T ss_pred CcCHhHHHHHhccccCC
Confidence 45678999999999995
No 5
>d1zmec1 g.38.1.1 (C:31-66) PUT3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=30.25 E-value=13 Score=18.18 Aligned_cols=14 Identities=21% Similarity=0.747 Sum_probs=8.9
Q ss_pred CchhhhhhhhcCCC
Q 047530 26 PCAACKILRRRCVE 39 (72)
Q Consensus 26 pCAACK~lRRrC~~ 39 (72)
+|-.|+..+.||..
T Consensus 3 aC~~Cr~rK~kCd~ 16 (36)
T d1zmec1 3 ACLSCRKRHIKCPG 16 (36)
T ss_dssp CCHHHHHHTCCCCC
T ss_pred cHHHHHHhCCcCCC
Confidence 56666666666643
No 6
>d1dl0a_ g.3.6.2 (A:) J-atracotoxin-hv1c {Australian funnel-web spider (Hadronyche versuta) [TaxId: 6904]}
Probab=30.08 E-value=5.8 Score=20.52 Aligned_cols=10 Identities=50% Similarity=0.936 Sum_probs=7.6
Q ss_pred CCCCCCchhh
Q 047530 21 PVVLSPCAAC 30 (72)
Q Consensus 21 ~~~~~pCAAC 30 (72)
++..+|||||
T Consensus 4 tgadrpcaac 13 (37)
T d1dl0a_ 4 TGADRPCAAC 13 (37)
T ss_dssp CCTTSBCCSS
T ss_pred cCCCCccccc
Confidence 4667888887
No 7
>d1pyia1 g.38.1.1 (A:30-71) PPR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.93 E-value=13 Score=18.52 Aligned_cols=15 Identities=20% Similarity=0.899 Sum_probs=12.2
Q ss_pred CCchhhhhhhhcCCC
Q 047530 25 SPCAACKILRRRCVE 39 (72)
Q Consensus 25 ~pCAACK~lRRrC~~ 39 (72)
.+|..|+..+.||..
T Consensus 3 ~aC~~Cr~rK~kCd~ 17 (42)
T d1pyia1 3 TACKRCRLKKIKCDQ 17 (42)
T ss_dssp CCCHHHHHHTCCCCC
T ss_pred HHHHHHHHhCcCCCC
Confidence 578888888888865
No 8
>d1qp9a1 g.38.1.1 (A:55-97) Hap1 (Cyp1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=26.87 E-value=18 Score=17.97 Aligned_cols=17 Identities=18% Similarity=0.618 Sum_probs=14.0
Q ss_pred CCCCchhhhhhhhcCCC
Q 047530 23 VLSPCAACKILRRRCVE 39 (72)
Q Consensus 23 ~~~pCAACK~lRRrC~~ 39 (72)
+..+|..|+..+-+|..
T Consensus 6 ~~~aC~~Cr~rKikCd~ 22 (43)
T d1qp9a1 6 IPLGCTICRKRKVKCDK 22 (43)
T ss_dssp CCSSCHHHHHHTSCCCC
T ss_pred cccchHHHHhhccCcCC
Confidence 45689999999999964
No 9
>d1i1ip_ d.92.1.5 (P:) Neurolysin (endopeptidase 24.16, thimet oligopeptidase) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=25.91 E-value=5.5 Score=29.82 Aligned_cols=24 Identities=29% Similarity=0.447 Sum_probs=20.0
Q ss_pred ccccCCCCCC--chHHHHHHHhhChh
Q 047530 42 VLAPYFPPTE--PQKFVIAHRVFGAS 65 (72)
Q Consensus 42 ~fAPYFPa~~--~~~F~~vHrvFG~s 65 (72)
.+.||||-+. ..-|..+.+|||..
T Consensus 343 ~l~~YFpl~~vl~gl~~l~~~Lfgi~ 368 (665)
T d1i1ip_ 343 SLKEYFPIEVVTEGLLSIYQELLGLS 368 (665)
T ss_dssp HHGGGCBHHHHHHHHHHHHHHHHTEE
T ss_pred cccccccHHHHHHHHHHHHHHHhhee
Confidence 4789999876 47799999999974
No 10
>d1r5ta_ c.97.1.1 (A:) mono-domain cytidine deaminase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.61 E-value=14 Score=22.55 Aligned_cols=23 Identities=22% Similarity=0.560 Sum_probs=15.3
Q ss_pred CCCCCCchhhhhh-hhcCCCCCcc
Q 047530 21 PVVLSPCAACKIL-RRRCVEKCVL 43 (72)
Q Consensus 21 ~~~~~pCAACK~l-RRrC~~~C~f 43 (72)
....+||++||.. +.-+.++.+.
T Consensus 89 ~~~~sPCG~CRQ~l~E~~~~~~~i 112 (141)
T d1r5ta_ 89 DQCVSPCGVCRQFINEFVVKDFPI 112 (141)
T ss_dssp SSCCCCCHHHHHHHHTTSCTTCEE
T ss_pred CCCCCchHHHHHHHHHhcCCCcEE
Confidence 3456899999976 4445566543
No 11
>d1wfpa_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At1g12440 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=23.28 E-value=31 Score=19.68 Aligned_cols=18 Identities=28% Similarity=0.674 Sum_probs=12.1
Q ss_pred CCCCCCCCCCCCCchhhh
Q 047530 14 APQSPPPPVVLSPCAACK 31 (72)
Q Consensus 14 ~~~~~~~~~~~~pCAACK 31 (72)
..+..++-....+|..|+
T Consensus 15 ~~p~~~~k~kk~RC~~C~ 32 (74)
T d1wfpa_ 15 AAPLDPPKSTATRCLSCN 32 (74)
T ss_dssp CCCSCCTTCCCCBCSSSC
T ss_pred cCCCCCCCCCCCcChhcC
Confidence 333344556689999998
No 12
>d2d30a1 c.97.1.1 (A:1-124) mono-domain cytidine deaminase {Bacillus anthracis [TaxId: 1392]}
Probab=22.06 E-value=18 Score=21.57 Aligned_cols=19 Identities=26% Similarity=0.739 Sum_probs=12.7
Q ss_pred CCCCchhhhhhhh-cCCCCC
Q 047530 23 VLSPCAACKILRR-RCVEKC 41 (72)
Q Consensus 23 ~~~pCAACK~lRR-rC~~~C 41 (72)
..+||++||..=+ =+.++.
T Consensus 82 ~~~PCG~CRQ~l~E~~~~~~ 101 (124)
T d2d30a1 82 PVPPCGACRQVMVELCKQDT 101 (124)
T ss_dssp CCCCCHHHHHHHHHHSCTTC
T ss_pred ccCCchHHHHHHHHhcCCCc
Confidence 4579999997633 355554
No 13
>d1s4bp_ d.92.1.5 (P:) Neurolysin (endopeptidase 24.16, thimet oligopeptidase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.41 E-value=7 Score=29.11 Aligned_cols=24 Identities=25% Similarity=0.443 Sum_probs=20.2
Q ss_pred ccccCCCCCC--chHHHHHHHhhChh
Q 047530 42 VLAPYFPPTE--PQKFVIAHRVFGAS 65 (72)
Q Consensus 42 ~fAPYFPa~~--~~~F~~vHrvFG~s 65 (72)
.+.||||-+. ..-|..+.++||..
T Consensus 332 ~l~~YF~l~~vl~Glf~l~~~Lfgi~ 357 (654)
T d1s4bp_ 332 LLKEYFPVQVVTHGLLGIYQELLGLA 357 (654)
T ss_dssp HHHTTCBHHHHHHHHHHHHHHHHTEE
T ss_pred hhhhcchHHHHHHHHHHHHHHHhcee
Confidence 5789999875 57899999999974
No 14
>d1uwza_ c.97.1.1 (A:) mono-domain cytidine deaminase {Bacillus subtilis [TaxId: 1423]}
Probab=20.41 E-value=19 Score=21.55 Aligned_cols=20 Identities=30% Similarity=0.876 Sum_probs=13.4
Q ss_pred CCCCchhhhhh-hhcCCCCCc
Q 047530 23 VLSPCAACKIL-RRRCVEKCV 42 (72)
Q Consensus 23 ~~~pCAACK~l-RRrC~~~C~ 42 (72)
..+||++|+.. +.-+.++..
T Consensus 82 ~~sPCG~CRQ~l~E~~~~~~~ 102 (130)
T d1uwza_ 82 PVSPCGACRQVISELCTKDVI 102 (130)
T ss_dssp SCCCCHHHHHHHHHHSCTTCE
T ss_pred ccCcCHHHHHHHHHhCCCCcE
Confidence 35899999976 444555543
Done!