Query 047535
Match_columns 376
No_of_seqs 119 out of 1154
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 21:11:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047535.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047535hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3psg_A Pepsinogen; hydrolase(a 100.0 8.2E-59 2.8E-63 441.1 28.0 307 13-372 47-370 (370)
2 1tzs_A Cathepsin E; hydrolase, 100.0 1.3E-57 4.4E-62 430.8 29.2 311 15-374 16-344 (351)
3 1mpp_A Pepsin; hydrolase(acid 100.0 1.2E-57 4.3E-62 432.8 27.9 318 12-375 7-358 (361)
4 3vla_A EDGP; extracellular, in 100.0 1.5E-57 5.3E-62 437.6 28.8 341 11-375 7-408 (413)
5 1dpj_A Proteinase A; proteinas 100.0 8.1E-58 2.8E-62 428.7 26.2 307 15-372 6-329 (329)
6 2x0b_A Renin; hydrolase-hormon 100.0 2.2E-58 7.6E-63 439.0 22.6 310 14-372 53-383 (383)
7 2apr_A Rhizopuspepsin; hydrola 100.0 2.2E-57 7.6E-62 424.8 28.8 309 11-372 4-324 (325)
8 4aa9_A Chymosin; hydrolase, as 100.0 3.8E-58 1.3E-62 429.5 22.6 305 14-372 3-320 (320)
9 1j71_A Candidapepsin, aspartic 100.0 9.4E-58 3.2E-62 429.1 25.0 304 12-375 2-327 (334)
10 3fv3_A SAPP1P-secreted asparti 100.0 1.3E-57 4.6E-62 429.2 25.3 309 12-375 2-332 (339)
11 3cms_A Chymosin B; hydrolase, 100.0 9.9E-58 3.4E-62 427.0 23.7 305 14-372 6-323 (323)
12 3c9x_A Trichoderma reesei aspa 100.0 2.5E-57 8.7E-62 425.1 26.3 305 17-371 10-329 (329)
13 1am5_A Pepsin, acid proteinase 100.0 3E-57 1E-61 424.0 26.5 303 15-372 5-324 (324)
14 2qzx_A Candidapepsin-5; aspart 100.0 3.2E-57 1.1E-61 426.9 24.9 308 12-375 2-334 (342)
15 1htr_B Gastricsin; aspartyl pr 100.0 3.7E-57 1.3E-61 424.2 24.7 306 16-372 6-329 (329)
16 1oew_A Endothiapepsin; hydrola 100.0 5.5E-57 1.9E-61 422.9 24.9 303 18-371 11-329 (329)
17 3aup_A SBG7S, BG, basic 7S glo 100.0 6.2E-56 2.1E-60 426.8 30.7 338 13-376 10-397 (403)
18 3k1w_A Renin; protease, altern 100.0 7.9E-57 2.7E-61 424.3 23.2 312 12-372 8-340 (341)
19 1miq_A Plasmepsin; aspartic pr 100.0 1.8E-56 6.2E-61 425.7 24.8 303 14-372 54-374 (375)
20 3pvk_A Candidapepsin-2; hydrol 100.0 2.2E-56 7.4E-61 421.5 24.6 308 13-375 3-334 (342)
21 2bju_A Plasmepsin II; aspartic 100.0 8.3E-56 2.8E-60 428.0 24.6 303 14-372 130-450 (453)
22 1ibq_A Aspergillopepsin; aspar 100.0 2.2E-55 7.4E-60 411.3 26.3 301 18-372 10-325 (325)
23 3qvc_A Histo-aspartic protease 100.0 1.7E-55 6E-60 426.3 24.9 306 11-372 126-449 (451)
24 1izd_A Aspartic proteinase; su 100.0 3.3E-55 1.1E-59 409.6 23.6 299 18-372 11-323 (323)
25 1yg9_A Aspartic protease BLA G 100.0 2.9E-55 9.9E-60 411.2 21.8 302 15-372 10-329 (330)
26 1bxo_A Protein (penicillopepsi 100.0 3.8E-55 1.3E-59 409.3 21.2 299 18-372 11-323 (323)
27 1qdm_A Prophytepsin; aspartic 100.0 1.9E-54 6.7E-59 422.6 26.2 316 15-372 45-478 (478)
28 2ewy_A Beta-secretase 2; BACE2 100.0 2.1E-53 7.2E-58 406.9 28.8 324 15-375 6-358 (383)
29 3vf3_A Beta-secretase 1; struc 100.0 2.9E-53 9.9E-58 408.4 29.4 317 21-375 27-377 (402)
30 2qp8_A Beta-secretase 1; BACE1 100.0 4.3E-53 1.5E-57 406.2 30.2 320 19-375 18-370 (395)
31 3lpj_A Beta-secretase 1; alzhe 100.0 8.7E-53 3E-57 410.8 28.2 320 20-376 72-424 (455)
32 1t6e_X Xylanase inhibitor; two 100.0 8E-52 2.7E-56 395.3 31.2 328 13-375 3-380 (381)
33 1wkr_A Polyporopepsin; hydrola 100.0 4E-52 1.4E-56 391.8 26.0 302 15-375 5-336 (340)
34 1b5f_A Protein (cardosin A); h 100.0 7.8E-42 2.7E-46 305.4 18.1 226 14-276 5-238 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 4.9E-37 1.7E-41 275.1 19.4 221 127-372 3-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 5.2E-23 1.8E-27 156.0 8.3 90 14-124 5-96 (97)
37 1b5f_B Protein (cardosin A); h 99.7 1E-17 3.6E-22 124.6 6.8 80 288-372 2-87 (87)
38 2i1a_A DNA damage-inducible pr 94.5 0.094 3.2E-06 41.8 7.1 28 343-370 108-135 (148)
39 3s8i_A Protein DDI1 homolog 1; 94.0 0.089 3.1E-06 42.1 5.8 36 336-371 100-135 (148)
40 2i1a_A DNA damage-inducible pr 93.9 0.061 2.1E-06 42.9 4.6 32 20-54 23-54 (148)
41 3s8i_A Protein DDI1 homolog 1; 87.3 0.49 1.7E-05 37.7 3.8 46 6-54 7-52 (148)
42 2hs1_A HIV-1 protease; ultra-h 82.6 1.6 5.6E-05 31.9 4.4 28 25-55 10-37 (99)
43 1fmb_A EIAV protease; hydrolas 79.4 1.9 6.6E-05 31.9 3.9 26 25-53 10-35 (104)
44 3liy_A Protease; hydrolase, hy 79.3 1.6 5.5E-05 32.7 3.4 32 25-57 12-46 (116)
45 3ec0_A Protease; HIV-2, inhibi 78.4 2.7 9.2E-05 30.8 4.3 28 25-55 10-37 (99)
46 2hah_A Protease, retropepsin; 66.9 5.3 0.00018 30.1 3.7 24 28-54 18-41 (116)
47 3sqf_A Protease; folded monome 65.6 6.1 0.00021 29.6 3.7 29 25-56 11-39 (114)
48 3slz_A GAG-Pro-POL polyprotein 62.1 9.7 0.00033 29.4 4.4 28 24-54 23-50 (132)
49 2rsp_A RSV protease; hydrolase 52.8 14 0.00048 28.1 3.9 21 35-56 30-50 (124)
50 3ka2_A [L-Ala51;Gly51']HIV-1 p 49.2 15 0.0005 30.6 3.7 27 25-54 10-36 (203)
51 3c9x_A Trichoderma reesei aspa 46.6 22 0.00077 31.8 5.0 39 15-54 186-230 (329)
52 1bxo_A Protein (penicillopepsi 39.6 22 0.00075 31.7 3.7 39 15-54 182-224 (323)
53 1oew_A Endothiapepsin; hydrola 39.4 26 0.00089 31.3 4.2 40 14-54 184-229 (329)
54 1ibq_A Aspergillopepsin; aspar 39.0 30 0.001 30.9 4.5 39 15-54 181-225 (325)
55 1izd_A Aspartic proteinase; su 38.5 24 0.00082 31.5 3.8 39 15-54 182-225 (323)
56 2apr_A Rhizopuspepsin; hydrola 37.4 28 0.00095 31.1 4.1 39 15-54 186-229 (325)
57 1b5f_A Protein (cardosin A); h 36.4 35 0.0012 28.9 4.3 33 21-54 187-227 (239)
58 3ka2_A [L-Ala51;Gly51']HIV-1 p 28.3 64 0.0022 26.7 4.4 27 25-54 114-140 (203)
59 1lya_B Cathepsin D; lysosomal 28.0 56 0.0019 27.5 4.2 32 22-54 99-137 (241)
60 1fmb_A EIAV protease; hydrolas 27.4 60 0.0021 23.7 3.7 28 223-267 11-38 (104)
61 1yg9_A Aspartic protease BLA G 26.1 35 0.0012 30.5 2.7 33 21-54 192-230 (330)
62 3aup_A SBG7S, BG, basic 7S glo 24.6 82 0.0028 28.9 5.0 42 206-265 11-52 (403)
63 3slz_A GAG-Pro-POL polyprotein 23.5 64 0.0022 24.7 3.3 24 224-264 26-49 (132)
64 3vla_A EDGP; extracellular, in 22.5 79 0.0027 29.3 4.4 43 204-264 8-50 (413)
65 1qdm_A Prophytepsin; aspartic 22.0 78 0.0027 30.0 4.3 33 21-54 230-270 (478)
66 1mpp_A Pepsin; hydrolase(acid 21.2 1.3E+02 0.0046 26.9 5.7 43 204-265 7-49 (361)
No 1
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=8.2e-59 Score=441.11 Aligned_cols=307 Identities=20% Similarity=0.329 Sum_probs=260.4
Q ss_pred eeccccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccCCCCCCC
Q 047535 13 VQSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVS 92 (376)
Q Consensus 13 ~~~~~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~~ 92 (376)
.+++.+..+.+|+++|+|||||| ++.|+|||||+++||++..|..|.|..|+.|+|++|+||+..+
T Consensus 47 ~~~l~n~~d~~Y~~~i~iGTPpQ-~~~v~~DTGSs~lWV~s~~C~~~~C~~~~~y~~~~SsT~~~~~------------- 112 (370)
T 3psg_A 47 DEPLENYLDTEYFGTIGIGTPAQ-DFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEATS------------- 112 (370)
T ss_dssp CCTTGGGTTCCEEEEEEETTTTE-EEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEE-------------
T ss_pred eecceeccCCEEEEEEEEcCCCC-EEEEEEeCCCCccEEECCCCCCcccCCCCCCCCccCcCcEECC-------------
Confidence 45566678899999999999999 9999999999999999999999999999999999999999988
Q ss_pred CCCCCCCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeCCCC-CC-CCCcceEeecCCCC------ChHHHH
Q 047535 93 CSSQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTG-VF-NENEMGLVGLGRTR------LSLASQ 164 (376)
Q Consensus 93 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGL~~~~------~s~~~q 164 (376)
|.|.+.|++|+. .|.++.|+|++++ ++++++.||+++...+ .| ...++||||||++. .+++.+
T Consensus 113 ------~~~~i~Yg~Gs~-~G~~~~Dtv~ig~--~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~ 183 (370)
T 3psg_A 113 ------QELSITYGTGSM-TGILGYDTVQVGG--ISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVFDN 183 (370)
T ss_dssp ------EEEEEESSSCEE-EEEEEEEEEEETT--EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHHHH
T ss_pred ------cEEEEEeCCceE-EEEEEEEEEeeCC--cccCCeEEEEEEeecccccccCCccceeccCCccccccCCCCHHHH
Confidence 799999999996 8999999999999 8999999999998876 34 56689999999874 346777
Q ss_pred HHhh--cCCCeEEEecCCCCCCCCccceEEECCCCcccC-CCceeeeeecCCCCceEEEEEeeEEecCCCCceeeEeccC
Q 047535 165 ILSQ--LGANKFSYCLVPFHTDSSITSKMYFGNGSEVSG-GGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYN 241 (376)
Q Consensus 165 l~~~--~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~-~~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~~~~ 241 (376)
|.++ +..++|++||... ....|.|+|||.|..++ +.+.|+|+.. ..+|.|.+++|+|++ +.+..
T Consensus 184 l~~qg~i~~~~FS~~L~~~---~~~~G~l~fGg~D~~~y~g~l~~~pv~~---~~~w~v~l~~i~v~g-----~~~~~-- 250 (370)
T 3psg_A 184 LWDQGLVSQDLFSVYLSSN---DDSGSVVLLGGIDSSYYTGSLNWVPVSV---EGYWQITLDSITMDG-----ETIAC-- 250 (370)
T ss_dssp HHHTTCSSSSEEEEEEC--------CEEEEETCCCGGGBSSCCEEEECSE---ETTEEEEECEEESSS-----SEEEC--
T ss_pred HHHCCCCCCCEEEEEEccC---CCCCeEEEEEeeChHhcCCcceeecccc---cceeEEEEeEEEECC-----EEEec--
Confidence 8776 7789999999865 23579999999776554 4599999987 668999999999999 76653
Q ss_pred CCCccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCCCCccceeecCCCCCCCCeEEEEecCCceEEECCC
Q 047535 242 SSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKVPLIHT 321 (376)
Q Consensus 242 ~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~~~g~~~~~i~~~ 321 (376)
.....++|||||+++++|++++++|.++|.+... ....+.++|...+ .+|+|+|.|+| ..++|+++
T Consensus 251 ----~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~-----~~g~~~v~C~~~~----~lP~i~f~~~g-~~~~l~~~ 316 (370)
T 3psg_A 251 ----SGGCQAIVDTGTSLLTGPTSAIANIQSDIGASEN-----SDGEMVISCSSID----SLPDIVFTIDG-VQYPLSPS 316 (370)
T ss_dssp ----TTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEEC-----TTCCEECCGGGGG----GCCCEEEEETT-EEEEECHH
T ss_pred ----CCCceEEEcCCCCcEECCHHHHHHHHHHhCCccc-----CCCcEEEECCCcc----cCCcEEEEECC-EEEEECHH
Confidence 2456899999999999999999999999865421 2345678898766 89999999988 99999999
Q ss_pred ceEEecCCCCeEEE-EEEccC-----CCceeechhhhcceEEEEECCCCEEEEecCC
Q 047535 322 STFIPPPVEGVFCF-AMQPID-----GDVGIFGNFAQSDLFIGYDFDSQMVSFKPTD 372 (376)
Q Consensus 322 ~y~~~~~~~~~~C~-~i~~~~-----~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~ 372 (376)
+|+.+. .+ .|+ +++..+ +..||||++|||++|+|||.+++|||||+++
T Consensus 317 ~yi~~~--~~-~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 317 AYILQD--DD-SCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp HHEEEC--SS-CEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred HhcccC--CC-EEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 999983 34 585 576632 3469999999999999999999999999974
No 2
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.3e-57 Score=430.84 Aligned_cols=311 Identities=22% Similarity=0.359 Sum_probs=258.2
Q ss_pred ccccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccCCCCCCCCC
Q 047535 15 SNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVSCS 94 (376)
Q Consensus 15 ~~~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~~c~ 94 (376)
++.+..+.+|+++|.||||+| ++.|+|||||+++||++..|..+.|..++.|+|++|+||+...
T Consensus 16 ~l~n~~~~~Y~~~i~iGtP~Q-~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~--------------- 79 (351)
T 1tzs_A 16 PLINYLDMEYFGTISIGSPPQ-NFTVIFDTGSSNLWVPSVYCTSPACKTHSRFQPSQSSTYSQPG--------------- 79 (351)
T ss_dssp TTGGGSSSCCCEEEEETTTTE-EEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCBCCS---------------
T ss_pred eceecCCCEEEEEEEECCCCe-EEEEEEeCCCcceEEecCCCCccccCCCCcCCcccCcceEECC---------------
Confidence 333457799999999999999 9999999999999999999986666778899999999999877
Q ss_pred CCCCCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeCCCCC-C-CCCcceEeecCCCCC------hHHHHHH
Q 047535 95 SQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTGV-F-NENEMGLVGLGRTRL------SLASQIL 166 (376)
Q Consensus 95 ~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GilGL~~~~~------s~~~ql~ 166 (376)
|.|.+.|++|++ .|.+++|+|++++ ++++++.||+++...+. | ...++||||||+... +++.+|.
T Consensus 80 ----~~~~i~Yg~Gs~-~G~~~~D~v~ig~--~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~ 152 (351)
T 1tzs_A 80 ----QSFSIQYGTGSL-SGIIGADQVSVEG--LTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMM 152 (351)
T ss_dssp ----CEEEEESSSCEE-EEEEEEEEEEETT--EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHH
T ss_pred ----CEEEEEeCCCCe-EEEEEEeEEEECC--eEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHHH
Confidence 799999999985 7999999999999 88999999999987653 3 556899999998754 4677887
Q ss_pred hh--cCCCeEEEecCCCCCCCCccceEEECCCCcccC-CCceeeeeecCCCCceEEEEEeeEEecCCCCceeeEeccCCC
Q 047535 167 SQ--LGANKFSYCLVPFHTDSSITSKMYFGNGSEVSG-GGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYNSS 243 (376)
Q Consensus 167 ~~--~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~-~~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~~~~~~ 243 (376)
++ +..++|++||.+.... ...|.|+|||.|..+. +.+.|+|+.. ..+|.|.+++|+|++ +.+..
T Consensus 153 ~qg~i~~~~FS~~L~~~~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~v~l~~i~v~~-----~~~~~---- 219 (351)
T 1tzs_A 153 AQNLVDLPMFSVYMSSNPEG-GAGSELIFGGYDHSHFSGSLNWVPVTK---QAYWQIALDNIQVGG-----TVMFC---- 219 (351)
T ss_dssp HTTCCSSSEEEEECCCCC---CTTCEEEETSCCGGGBCSCCEEEECSE---ETTEEEEEEEEEETT-----EEEEC----
T ss_pred HCCCCCCCEEEEEEcCCCCC-CCCCEEEECCCCHHHcCCceEEEecCC---CceEEEEeCEEEECC-----ceEEc----
Confidence 76 6779999999875321 2379999999876554 4599999987 569999999999999 76542
Q ss_pred CccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCCCCccceeecCCCCCCCCeEEEEecCCceEEECCCce
Q 047535 244 GAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKVPLIHTST 323 (376)
Q Consensus 244 ~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~~~g~~~~~i~~~~y 323 (376)
.....++|||||++++||++++++|.+++.+... . ..+.++|+..+ .+|.|+|.|+| ..++|++++|
T Consensus 220 --~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~-----~-g~~~~~C~~~~----~~P~i~f~f~g-~~~~i~~~~y 286 (351)
T 1tzs_A 220 --SEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPV-----D-GEYAVECANLN----VMPDVTFTING-VPYTLSPTAY 286 (351)
T ss_dssp --TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC-----S-SSEEECGGGGG----GSCCEEEEETT-EEEEECTTTS
T ss_pred --CCCceEEeccCCcceeCCHHHHHHHHHHhCCccc-----C-CeEEEeCCCCc----cCCcEEEEECC-EEEEECHHHh
Confidence 2456899999999999999999999999865332 1 44667898765 79999999987 9999999999
Q ss_pred EEecCC-CCeEEE-EEEccC-----CCceeechhhhcceEEEEECCCCEEEEecCCCC
Q 047535 324 FIPPPV-EGVFCF-AMQPID-----GDVGIFGNFAQSDLFIGYDFDSQMVSFKPTDCT 374 (376)
Q Consensus 324 ~~~~~~-~~~~C~-~i~~~~-----~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~c~ 374 (376)
+.+... ++..|+ +|+..+ .+.||||++|||++|+|||.+++|||||+++|.
T Consensus 287 i~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~ 344 (351)
T 1tzs_A 287 TLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPW 344 (351)
T ss_dssp EECC-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC--
T ss_pred EeeccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCcc
Confidence 988642 235796 577642 468999999999999999999999999999985
No 3
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1.2e-57 Score=432.79 Aligned_cols=318 Identities=21% Similarity=0.294 Sum_probs=262.6
Q ss_pred ceecccc-ccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCC-CCCCCCCCCCCCCCCCcccccCCCCcccCCCC
Q 047535 12 VVQSNVS-TANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCV-QCYKQVKPIYNPASSSSYKELSCQSEQCHLLD 89 (376)
Q Consensus 12 ~~~~~~~-~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~-~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~ 89 (376)
+...++. ..+++|+++|.||||+| ++.|+|||||+++||++..|. ...|..++.|+|++|+||+...
T Consensus 7 ~~~~~l~~~~~~~Y~~~i~iGtP~q-~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~---------- 75 (361)
T 1mpp_A 7 VDTPGLYDFDLEEYAIPVSIGTPGQ-DFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETD---------- 75 (361)
T ss_dssp EEEEEEEETTTTEEEEEEEETTTTE-EEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEEE----------
T ss_pred cceEEeecCCCCEEEEEEEECCCCc-EEEEEEcCCCCCeEECCCCCCCCccCCCCCcCCCccCCceEecC----------
Confidence 3333444 56799999999999999 999999999999999999998 3344567899999999999987
Q ss_pred CCCCCCCCCCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeCCCC------CC-CCCcceEeecCCCCC---
Q 047535 90 TVSCSSQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTG------VF-NENEMGLVGLGRTRL--- 159 (376)
Q Consensus 90 ~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~~~~------~~-~~~~~GilGL~~~~~--- 159 (376)
|.|.+.|++|++ .|.+++|+|++++ ++++++.|||++...+ .+ ....+||||||++..
T Consensus 76 ---------~~~~i~Yg~Gs~-~G~~~~D~v~~g~--~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 143 (361)
T 1mpp_A 76 ---------YNLNITYGTGGA-NGIYFRDSITVGG--ATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAM 143 (361)
T ss_dssp ---------EEEEEECSSCEE-EEEEEEEEEEETT--EEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHH
T ss_pred ---------CeEEEEECCceE-EEEEEEEEEEECC--EEEeceEEEEEEeccCccccccccccCCCCCEEEeCCcccccc
Confidence 689999999995 8999999999999 8899999999998754 34 556899999998743
Q ss_pred ---------hHHHHHHhh--cCCCeEEEecCCCCCCCCccceEEECCCCcccC-CCceeeeeecCCC-CceEEEEEeeEE
Q 047535 160 ---------SLASQILSQ--LGANKFSYCLVPFHTDSSITSKMYFGNGSEVSG-GGVVSTSLVSKED-KTYYFVTLEGIS 226 (376)
Q Consensus 160 ---------s~~~ql~~~--~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~-~~~~~~p~~~~~~-~~~w~v~~~~i~ 226 (376)
+++.+|.++ +..++||+||.+. ...|.|+|||.|..+. +.+.|+|+..... ..+|.|.+++|+
T Consensus 144 ~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~----~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~ 219 (361)
T 1mpp_A 144 EAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTN----DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVK 219 (361)
T ss_dssp HHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCS----SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEE
T ss_pred cccccccCCCHHHHHHHcCCCCCcEEEEEecCC----CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEE
Confidence 456677776 6779999999864 3579999999876554 4599999998432 128999999999
Q ss_pred ecCCCCceeeEeccCCCCccCCCceE-EecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCCCCccceeecCCCCCCC-C
Q 047535 227 VGNLSNSSKLIPYYNSSGAISKGNMF-IDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIA-P 304 (376)
Q Consensus 227 v~~~~~~~~~~~~~~~~~~~~~~~~i-iDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~-P 304 (376)
|++ +.+.. .....++ |||||++++||++++++|.++|.+.+. .....+.++|+..+ .+ |
T Consensus 220 v~~-----~~~~~------~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~----~~~g~~~~~C~~~~----~~~p 280 (361)
T 1mpp_A 220 IDG-----SDAVS------FDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT----ESQQGYTVPCSKYQ----DSKT 280 (361)
T ss_dssp ETT-----EEEEE------EEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE----EETTEEEEEHHHHT----TCCC
T ss_pred ECC-----eeecc------CCCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc----CCCCcEEEECCCcc----cCCC
Confidence 999 76642 2345799 999999999999999999999865422 12334667898765 77 9
Q ss_pred eEEEEe--cC----CceEEECCCceEEecCCCCeEEE-EEEccCCCceeechhhhcceEEEEECCCCEEEEecCCCCC
Q 047535 305 ILTAHF--DG----GAKVPLIHTSTFIPPPVEGVFCF-AMQPIDGDVGIFGNFAQSDLFIGYDFDSQMVSFKPTDCTK 375 (376)
Q Consensus 305 ~i~f~~--~g----~~~~~i~~~~y~~~~~~~~~~C~-~i~~~~~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~c~~ 375 (376)
.|+|.| ++ +..++|++++|+++...++..|+ +|+....+.||||++|||++|+|||++++|||||+++|+.
T Consensus 281 ~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~~ 358 (361)
T 1mpp_A 281 TFSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDGGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGY 358 (361)
T ss_dssp EEEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEESSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTT
T ss_pred cEEEEEEcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeCCCCCEEEChHHhccEEEEEECCCCEEEEEEcccCC
Confidence 999999 61 39999999999998752346896 7877556789999999999999999999999999999985
No 4
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=1.5e-57 Score=437.64 Aligned_cols=341 Identities=21% Similarity=0.378 Sum_probs=273.7
Q ss_pred cceecccccc--CceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccCCC
Q 047535 11 NVVQSNVSTA--NGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLL 88 (376)
Q Consensus 11 ~~~~~~~~~~--~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~ 88 (376)
+.+.+|+..+ +++|+++|.|||||| ++.|+|||||+++||+|..| .+|+||+.+.|.++.|...
T Consensus 7 ~~~~~pv~~d~~~~~Y~~~i~iGTPpq-~~~v~~DTGS~~lWv~c~~c-------------~~Sst~~~v~C~s~~C~~~ 72 (413)
T 3vla_A 7 SALVVPVKKDASTLQYVTTINQRTPLV-SENLVVDLGGRFLWVDCDQN-------------YVSSTYRPVRCRTSQCSLS 72 (413)
T ss_dssp SEEEEEEEECTTTCCEEEEEEETTTTE-EEEEEEETTCSSEEEECSSS-------------CCCTTCEECBTTSHHHHHT
T ss_pred ccEEEEeeecCCCCeEEEEEEcCCCCc-ceEEEEeCCChhhhcccCCC-------------CCCCCcCccCCCccccccc
Confidence 4555665554 589999999999999 99999999999999998864 2799999999999999876
Q ss_pred CCCCC---C-------CCCCCeeeEEe-CCCCeeeEEEEEEEEEecCC-------CCCcccEEEeeeeCCCC-CCCCCcc
Q 047535 89 DTVSC---S-------SQQLCNYTYGY-ADSSLTKGVLATERITFGNS-------NNFFDNVVFGCGHNNTG-VFNENEM 149 (376)
Q Consensus 89 ~~~~c---~-------~~~~~~~~~~Y-~~g~~~~G~~~~D~v~i~~~-------~~~~~~~~fg~~~~~~~-~~~~~~~ 149 (376)
....| . .++.|.|.+.| ++++.+.|.+++|+|+|+.. .++++++.|||++.... .+...++
T Consensus 73 ~~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~d 152 (413)
T 3vla_A 73 GSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVV 152 (413)
T ss_dssp TCCEEECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCC
T ss_pred ccCCCcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcccccc
Confidence 54433 1 13569999999 47777799999999999721 15788999999998632 2345689
Q ss_pred eEeecCCCCChHHHHHHhhcC-CCeEEEecCCCCCCCCccceEEECCCCcc------cCCC-ceeeeeecCCC-------
Q 047535 150 GLVGLGRTRLSLASQILSQLG-ANKFSYCLVPFHTDSSITSKMYFGNGSEV------SGGG-VVSTSLVSKED------- 214 (376)
Q Consensus 150 GilGL~~~~~s~~~ql~~~~~-~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~------~~~~-~~~~p~~~~~~------- 214 (376)
||||||+...|++.||..+.. .++||+||... .+..|.|+|||.+.. ..+. +.|+|++..+.
T Consensus 153 GIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~---~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~ 229 (413)
T 3vla_A 153 GMAGLGRTRIALPSQFASAFSFKRKFAMCLSGS---TSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATST 229 (413)
T ss_dssp EEEECSSSSSSHHHHHHHHHTCCSEEEEECCSC---SSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCC
T ss_pred cccccCCCCcchHHHHhhhcCCCceEEEeCCCC---CCCceEEEECCCcccccccccccCCceeEeecccCCcccccccc
Confidence 999999999999999988633 68999999864 235799999997653 2345 99999998642
Q ss_pred ----CceEEEEEeeEEecCCCCceeeEeccCCCCc---cCCCceEEecCCCCccccHHHHHHHHHHHHHHhc---CCCCC
Q 047535 215 ----KTYYFVTLEGISVGNLSNSSKLIPYYNSSGA---ISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIK---LTPYQ 284 (376)
Q Consensus 215 ----~~~w~v~~~~i~v~~~~~~~~~~~~~~~~~~---~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~---~~~~~ 284 (376)
..+|.|.+++|+|++ +.+.++.+.+. .....+||||||++++||+++|++|.++|.+.+. ....
T Consensus 230 ~~~~~~~y~V~l~~IsVgg-----~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~- 303 (413)
T 3vla_A 230 QGEPSVEYFIGVKSIKINS-----KIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRV- 303 (413)
T ss_dssp TTCCCCSCEECCCEEEETT-----EEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEE-
T ss_pred ccCCCceEEEEEEEEEECC-----EEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcC-
Confidence 169999999999999 88887654331 1346899999999999999999999999988764 1211
Q ss_pred CCCCCccceeecCCCC-----CCCCeEEEEecC-CceEEECCCceEEecCCCCeEEEEEEccC---CCceeechhhhcce
Q 047535 285 DPRLGSQLCYKTPSMA-----GIAPILTAHFDG-GAKVPLIHTSTFIPPPVEGVFCFAMQPID---GDVGIFGNFAQSDL 355 (376)
Q Consensus 285 ~~~~~~~~C~~~~~~~-----~~~P~i~f~~~g-~~~~~i~~~~y~~~~~~~~~~C~~i~~~~---~~~~ilG~~fl~~~ 355 (376)
+...++..|+..+... ..+|+|+|+|+| +..|+|++++|+++.. .+.+|++++... ...||||+.|||++
T Consensus 304 ~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~-~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~ 382 (413)
T 3vla_A 304 ASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIN-DNVVCLGVVDGGSNLRTSIVIGGHQLEDN 382 (413)
T ss_dssp CCCTTCSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEE-TTEEEECEEEEESSCSSSEEECHHHHTTE
T ss_pred CCCCCCcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeC-CCcEEEEEEecCCCcccceeEehhhhcCe
Confidence 1234567899876421 279999999998 5899999999999875 568999888754 26899999999999
Q ss_pred EEEEECCCCEEEEec------CCCCC
Q 047535 356 FIGYDFDSQMVSFKP------TDCTK 375 (376)
Q Consensus 356 y~vFD~~~~rIGfa~------~~c~~ 375 (376)
|+|||++++|||||+ ++|++
T Consensus 383 ~vvfD~~~~riGfa~~~~~~~~~c~~ 408 (413)
T 3vla_A 383 LVQFDLATSRVGFSGTLLGSRTTCAN 408 (413)
T ss_dssp EEEEETTTTEEEEEEEGGGGTCCGGG
T ss_pred EEEEECCCCEEEEEEecccCcccccC
Confidence 999999999999998 56664
No 5
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=8.1e-58 Score=428.72 Aligned_cols=307 Identities=22% Similarity=0.355 Sum_probs=257.8
Q ss_pred ccccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccCCCCCCCCC
Q 047535 15 SNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVSCS 94 (376)
Q Consensus 15 ~~~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~~c~ 94 (376)
++.+..+.+|+++|.||||+| +++|+|||||+++||++..|..|.|..++.|||++|+||+...
T Consensus 6 ~l~~~~~~~Y~~~i~iGtP~q-~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~--------------- 69 (329)
T 1dpj_A 6 PLTNYLNAQYYTDITLGTPPQ-NFKVILDTGSSNLWVPSNECGSLACFLHSKYDHEASSSYKANG--------------- 69 (329)
T ss_dssp ECEEETTTEEEEEEEETTTTE-EEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE---------------
T ss_pred eeeecCCCEEEEEEEECCCCc-EEEEEEeCCCcCeEEecCCCCCcccCCcCcCCcccCcCeEECC---------------
Confidence 444567799999999999999 9999999999999999999998777778899999999999877
Q ss_pred CCCCCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeCCCC-CC-CCCcceEeecCCCCCh------HHHHHH
Q 047535 95 SQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTG-VF-NENEMGLVGLGRTRLS------LASQIL 166 (376)
Q Consensus 95 ~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGL~~~~~s------~~~ql~ 166 (376)
|.|.+.|++|++ .|.+++|+|++++ ++++++.||+++...+ .| ....+||||||+...+ ++.+|.
T Consensus 70 ----~~~~i~Yg~Gs~-~G~~~~D~v~ig~--~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~ 142 (329)
T 1dpj_A 70 ----TEFAIQYGTGSL-EGYISQDTLSIGD--LTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAI 142 (329)
T ss_dssp ----EEEEEEETTEEE-EEEEEEEEEEETT--EEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHH
T ss_pred ----cEEEEEECCceE-EEEEEEEEEEECC--eEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHH
Confidence 799999999965 8999999999999 8899999999998764 33 4568999999997543 456777
Q ss_pred hh--cCCCeEEEecCCCCCCCCccceEEECCCCcccC-CCceeeeeecCCCCceEEEEEeeEEecCCCCceeeEeccCCC
Q 047535 167 SQ--LGANKFSYCLVPFHTDSSITSKMYFGNGSEVSG-GGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYNSS 243 (376)
Q Consensus 167 ~~--~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~-~~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~~~~~~ 243 (376)
++ +..++|++||.....+....|.|+|||.|..+. +.+.|+|+.. ..+|.|.+++|+|++ +.+..
T Consensus 143 ~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~v~l~~i~v~~-----~~~~~---- 210 (329)
T 1dpj_A 143 QQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRR---KAYWEVKFEGIGLGD-----EYAEL---- 210 (329)
T ss_dssp HTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSS---BTTBEEEEEEEEETT-----EEEEC----
T ss_pred hcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCC---CceEEEEeeeEEECC-----eEecC----
Confidence 66 677899999986532223469999999876554 3499999987 569999999999999 76652
Q ss_pred CccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCCCCccceeecCCCCCCCCeEEEEecCCceEEECCCce
Q 047535 244 GAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKVPLIHTST 323 (376)
Q Consensus 244 ~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~~~g~~~~~i~~~~y 323 (376)
....++|||||++++||++++++|.+++.+.. .....+.++|.... .+|.|+|.|+| ..++|++++|
T Consensus 211 ---~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~-----~~~g~~~~~C~~~~----~~P~i~f~f~g-~~~~i~~~~y 277 (329)
T 1dpj_A 211 ---ESHGAAIDTGTSLITLPSGLAEMINAEIGAKK-----GWTGQYTLDCNTRD----NLPDLIFNFNG-YNFTIGPYDY 277 (329)
T ss_dssp ---SSCEEEECTTCSCEEECHHHHHHHHHHHTCEE-----CTTSSEEECGGGGG----GCCCEEEEETT-EEEEECTTTS
T ss_pred ---CCccEEeeCCCCcEECCHHHHHHHHHHhCCcc-----CCCCeEEEECCCCC----cCCcEEEEECC-EEEEECHHHh
Confidence 34689999999999999999999999986431 12344566888655 89999999998 9999999999
Q ss_pred EEecCCCCeEEE-EEEcc-----CCCceeechhhhcceEEEEECCCCEEEEecCC
Q 047535 324 FIPPPVEGVFCF-AMQPI-----DGDVGIFGNFAQSDLFIGYDFDSQMVSFKPTD 372 (376)
Q Consensus 324 ~~~~~~~~~~C~-~i~~~-----~~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~ 372 (376)
+.+.. ..|+ +|+.. ..+.||||++|||++|+|||.+++|||||+++
T Consensus 278 ~~~~~---~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 278 TLEVS---GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp EEEET---TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EecCC---CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 99864 4786 57654 24689999999999999999999999999874
No 6
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=2.2e-58 Score=438.99 Aligned_cols=310 Identities=21% Similarity=0.320 Sum_probs=257.4
Q ss_pred eccccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCC--CCCCCCCCCCCCCCCcccccCCCCcccCCCCCC
Q 047535 14 QSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQ--CYKQVKPIYNPASSSSYKELSCQSEQCHLLDTV 91 (376)
Q Consensus 14 ~~~~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~--c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~ 91 (376)
+++.+..+.+|+++|.|||||| +|.|+|||||+++||++..|.. ..|..|+.|||++|+||+...
T Consensus 53 ~~l~n~~~~~Y~~~I~IGTP~Q-~f~vi~DTGSs~lWV~s~~C~~~~~~C~~~~~y~~~~SsT~~~~~------------ 119 (383)
T 2x0b_A 53 VILTNYMDTQYYGEIGIGTPPQ-TFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNG------------ 119 (383)
T ss_dssp EEEEEETTTEEEEEEEETTTTE-EEEEEEETTCCCEEEEBTTSCTTSHHHHTSCCBCGGGCTTCEEEE------------
T ss_pred EeeeecCCCEEEEEEEECCCCc-EEEEEEeCCCCCeEEeccCCCCCcccccCCCCCCCCCCCcEEECC------------
Confidence 3444567899999999999999 9999999999999999999963 234467899999999999987
Q ss_pred CCCCCCCCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeCCCC-CC-CCCcceEeecCCCCC------hHHH
Q 047535 92 SCSSQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTG-VF-NENEMGLVGLGRTRL------SLAS 163 (376)
Q Consensus 92 ~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGL~~~~~------s~~~ 163 (376)
|.|.+.|++|++ .|.+++|+|++++ ++++ +.||+++...+ .| ...+|||||||++.. +++.
T Consensus 120 -------~~~~i~Yg~Gs~-~G~~~~Dtv~ig~--~~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~ 188 (383)
T 2x0b_A 120 -------TELTLRYSTGTV-SGFLSQDIITVGG--ITVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFD 188 (383)
T ss_dssp -------EEEEEECSSCEE-EEEEEEEEEEETT--EEEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHH
T ss_pred -------cEEEEEcCCccE-EEEEEeeEEEEcC--ceEE-EEEEEEEecCCcccccCCCceEeccCCCccccCCCCcHHH
Confidence 799999999986 7999999999999 8899 99999998765 23 567899999999754 3667
Q ss_pred HHHhh--cCCCeEEEecCCCCCC-CCccceEEECCCCcccC-CCceeeeeecCCCCceEEEEEeeEEecCCCCceeeEec
Q 047535 164 QILSQ--LGANKFSYCLVPFHTD-SSITSKMYFGNGSEVSG-GGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPY 239 (376)
Q Consensus 164 ql~~~--~~~~~fs~~l~~~~~~-~~~~G~l~~Gg~~~~~~-~~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~~ 239 (376)
+|.++ +..++||+||...... ....|.|+|||.|..++ +.+.|+|+.. ..+|.|.+++|+|++ +.+..
T Consensus 189 ~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~---~~~w~v~l~~i~v~~-----~~~~~ 260 (383)
T 2x0b_A 189 NIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK---TGVWQIQMKGVSVGS-----STLLC 260 (383)
T ss_dssp HHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSS---TTSCEEEECEEEESS-----CCCBS
T ss_pred HHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCC---CceEEEEEeEEEeCC-----ceEEc
Confidence 77776 6779999999875321 11379999999876654 4599999987 679999999999999 65431
Q ss_pred cCCCCccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCCCCccceeecCCCCCCCCeEEEEecCCceEEEC
Q 047535 240 YNSSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKVPLI 319 (376)
Q Consensus 240 ~~~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~~~g~~~~~i~ 319 (376)
.....++|||||+++++|++++++|.++|.+.. ....+.++|+..+ .+|+|+|.|+| ..++|+
T Consensus 261 ------~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~------~~g~~~v~C~~~~----~~P~i~f~~~g-~~~~l~ 323 (383)
T 2x0b_A 261 ------EDGCLALVDTGASYISGSTSSIEKLMEALGAKK------RLFDYVVKCNEGP----TLPDISFHLGG-KEYTLT 323 (383)
T ss_dssp ------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE------CSSCEEEEGGGTT----TCCCEEEEETT-EEEEEC
T ss_pred ------CCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc------cCCcEEEeccccc----cCceEEEEECC-EEEEEC
Confidence 245689999999999999999999999986432 2344667898765 89999999998 999999
Q ss_pred CCceEEecCC-CCeEEE-EEEccC-----CCceeechhhhcceEEEEECCCCEEEEecCC
Q 047535 320 HTSTFIPPPV-EGVFCF-AMQPID-----GDVGIFGNFAQSDLFIGYDFDSQMVSFKPTD 372 (376)
Q Consensus 320 ~~~y~~~~~~-~~~~C~-~i~~~~-----~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~ 372 (376)
|++|+++... ++..|+ +|+..+ .+.||||++|||++|+|||++++|||||+++
T Consensus 324 ~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 324 SADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp HHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 9999988652 246897 577642 4689999999999999999999999999864
No 7
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=2.2e-57 Score=424.82 Aligned_cols=309 Identities=19% Similarity=0.300 Sum_probs=260.5
Q ss_pred cceeccccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccCCCCC
Q 047535 11 NVVQSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDT 90 (376)
Q Consensus 11 ~~~~~~~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~ 90 (376)
..+.+.....+.+|+++|.||||+| ++.|+|||||+++||++..|..| |+.++.|+|++|+||+...
T Consensus 4 ~~v~~~~~~~~~~Y~~~i~iGTP~q-~~~v~~DTGSs~lWv~~~~c~~c-~~~~~~y~~~~SsT~~~~~----------- 70 (325)
T 2apr_A 4 GTVPMTDYGNDIEYYGQVTIGTPGK-KFNLDFDTGSSDLWIASTLCTNC-GSGQTKYDPNQSSTYQADG----------- 70 (325)
T ss_dssp TEEEEEEETTTTEEEEEEEETTTTE-EEEEEEETTCCCCEEEBTTCSSC-CTTSCCBCGGGCTTCEEEE-----------
T ss_pred CceeeeecCCCCEEEEEEEECCCCe-EEEEEEcCCCCCEEEccCCCchH-hcCCCCCCcccCCCeeeCC-----------
Confidence 3455666788899999999999999 99999999999999999999999 8889999999999999866
Q ss_pred CCCCCCCCCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeCCCCCC-CCCcceEeecCCCCC-------hHH
Q 047535 91 VSCSSQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTGVF-NENEMGLVGLGRTRL-------SLA 162 (376)
Q Consensus 91 ~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~~~~~~-~~~~~GilGL~~~~~-------s~~ 162 (376)
|.|.+.|++|+.+.|.+++|+|++++ ++++++.||+++.....| ....+||||||+... +++
T Consensus 71 --------~~~~i~Yg~Gs~~~G~~~~D~v~~g~--~~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~ 140 (325)
T 2apr_A 71 --------RTWSISYGDGSSASGILAKDNVNLGG--LLIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTPM 140 (325)
T ss_dssp --------EEEEEECTTSCEEEEEEEEEEEEETT--EEEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCHH
T ss_pred --------CEEEEEECCCCCEEEEEEEEEEEECC--EEECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCHH
Confidence 79999999999778999999999999 889999999999876545 445899999998643 477
Q ss_pred HHHHhh--cCCCeEEEecCCCCCCCCccceEEECCCCcccC-CCceeeeeecCCCCceEEEEEeeEEecCCCCceeeEec
Q 047535 163 SQILSQ--LGANKFSYCLVPFHTDSSITSKMYFGNGSEVSG-GGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPY 239 (376)
Q Consensus 163 ~ql~~~--~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~-~~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~~ 239 (376)
.+|.++ +..++||+||.+.. ....|.|+|||.|..+. +++.|+|+... ..+|.|.+++|+|++ +...
T Consensus 141 ~~l~~qg~i~~~~FS~~l~~~~--~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~~v~l~~i~vg~-----~~~~- 210 (325)
T 2apr_A 141 DNLISQGLISRPIFGVYLGKAK--NGGGGEYIFGGYDSTKFKGSLTTVPIDNS--RGWWGITVDRATVGT-----STVA- 210 (325)
T ss_dssp HHHHHTTSCSSSEEEEEECCGG--GTCCEEEEETCCCGGGBCSCCEEEECBCT--TSSCEEEECEEEETT-----EEEE-
T ss_pred HHHHhcCCCCCceEEEEecCCC--CCCCCEEEEccCCchhccCceEEEEccCC--CCEEEEEEeEEEECC-----EecC-
Confidence 888877 77899999996532 13579999999876554 45999999753 458999999999998 5322
Q ss_pred cCCCCccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCCCCccceeecCCCCCCCCeEEEEecCCceEEEC
Q 047535 240 YNSSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKVPLI 319 (376)
Q Consensus 240 ~~~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~~~g~~~~~i~ 319 (376)
....++|||||++++||+++|++++++|.+.+... ..+.++|+. . .+|.|+|.|+| ..+.|+
T Consensus 211 -------~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~-----g~~~~~C~~-~----~~p~i~f~f~g-~~~~ip 272 (325)
T 2apr_A 211 -------SSFDGILDTGTTLLILPNNIAASVARAYGASDNGD-----GTYTISCDT-S----AFKPLVFSING-ASFQVS 272 (325)
T ss_dssp -------CCEEEEECTTCSSEEEEHHHHHHHHHHHTCEECSS-----SCEEECSCG-G----GCCCEEEEETT-EEEEEC
T ss_pred -------CCceEEEecCCccEECCHHHHHHHHHHHhcccCCC-----CeEEEECCC-C----CCCcEEEEECC-EEEEEC
Confidence 34589999999999999999999999987654321 345678874 1 58999999998 699999
Q ss_pred CCceEEecCCCCeEEEE-EEccCCCceeechhhhcceEEEEECCCCEEEEecCC
Q 047535 320 HTSTFIPPPVEGVFCFA-MQPIDGDVGIFGNFAQSDLFIGYDFDSQMVSFKPTD 372 (376)
Q Consensus 320 ~~~y~~~~~~~~~~C~~-i~~~~~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~ 372 (376)
+++|+.+.. +..|++ ++..+.+.||||++|||++|+|||++++|||||+++
T Consensus 273 ~~~~~~~~~--~~~C~~~i~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 273 PDSLVFEEF--QGQCIAGFGYGNWGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp GGGGEEEEE--TTEEEESEEEESSSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred HHHEEEcCC--CCeEEEEEEcCCCCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 999998753 468965 665546789999999999999999999999999864
No 8
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=3.8e-58 Score=429.48 Aligned_cols=305 Identities=18% Similarity=0.290 Sum_probs=259.0
Q ss_pred eccccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccCCCCCCCC
Q 047535 14 QSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVSC 93 (376)
Q Consensus 14 ~~~~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~~c 93 (376)
+++.+..+.+|+++|.||||+| +++|++||||+++||++..|..|.|..++.|+|++|+||+...
T Consensus 3 ~~l~n~~d~~Y~~~i~iGtP~Q-~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~-------------- 67 (320)
T 4aa9_A 3 EPLTSYLDSQYFGKIYIGTPPQ-EFTVVFDTGSSDLWVPSIYCKSNVCKNHHRFDPRKSSTFRNLG-------------- 67 (320)
T ss_dssp -----CCCCCCEEEEEETTTTE-EEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE--------------
T ss_pred ccceeccCCEEEEEEEECCCCe-EEEEEEeCCCCceEEcCCCCCccccCCCCCCCCCCCcCeEcCC--------------
Confidence 4556678899999999999999 9999999999999999999998778888999999999999987
Q ss_pred CCCCCCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeCCCC-CC-CCCcceEeecCCCC------ChHHHHH
Q 047535 94 SSQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTG-VF-NENEMGLVGLGRTR------LSLASQI 165 (376)
Q Consensus 94 ~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGL~~~~------~s~~~ql 165 (376)
|.|.+.|++|+. .|.+++|+|++++ ++++++.||+++.... .+ ....+||||||++. .+++.+|
T Consensus 68 -----~~~~i~Yg~gs~-~G~~~~D~v~ig~--~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l 139 (320)
T 4aa9_A 68 -----KPLSIHYGTGSM-EGFLGYDTVTVSN--IVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNM 139 (320)
T ss_dssp -----EEEEEEETTEEE-EEEEEEEEEEETT--EEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHH
T ss_pred -----cEEEEEECCcEE-EEEEEEEEEEECC--EeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHH
Confidence 799999999996 8999999999999 8899999999998776 34 55679999999863 4577888
Q ss_pred Hhh--cCCCeEEEecCCCCCCCCccceEEECCCCcccCC-CceeeeeecCCCCceEEEEEeeEEecCCCCceeeEeccCC
Q 047535 166 LSQ--LGANKFSYCLVPFHTDSSITSKMYFGNGSEVSGG-GVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYNS 242 (376)
Q Consensus 166 ~~~--~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~~-~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~~~~~ 242 (376)
.++ +..++|++||.+. ...|.|+|||.|..+.. .+.|+|+.. ..+|.|.+++|+|++ +.+..
T Consensus 140 ~~~g~i~~~~Fs~~l~~~----~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~w~v~l~~i~v~~-----~~~~~--- 204 (320)
T 4aa9_A 140 MDRHLVARDLFSVYMDRN----GQGSMLTLGAIDPSYYTGSLHWVPVTL---QQYWQFTVDSVTING-----VAVAC--- 204 (320)
T ss_dssp HHTTCSSSSEEEEECCSS----SSCCEEEETCCCGGGEEEEEEEEECSS---BTTBEEEECEEEETT-----EEEES---
T ss_pred HhCCCCCCceEEEEeCCC----CCCeEEEEcccCHHHccCceEEEEccc---CCceEEEEeEEEECC-----EEecc---
Confidence 876 7789999999864 35799999998876553 499999986 669999999999999 77663
Q ss_pred CCccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCCCCccceeecCCCCCCCCeEEEEecCCceEEECCCc
Q 047535 243 SGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKVPLIHTS 322 (376)
Q Consensus 243 ~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~~~g~~~~~i~~~~ 322 (376)
.....++|||||++++||++++++|.+++.+... ....+.++|...+ .+|.|+|.|+| ..++|++++
T Consensus 205 ---~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~-----~~g~~~~~C~~~~----~~p~i~f~f~g-~~~~l~~~~ 271 (320)
T 4aa9_A 205 ---VGGCQAILDTGTSVLFGPSSDILKIQMAIGATEN-----RYGEFDVNCGNLR----SMPTVVFEING-RDYPLSPSA 271 (320)
T ss_dssp ---TTCEEEEECTTCSSEEEEHHHHHHHHHHTTCEEC-----TTSCEEECGGGGG----GCCCEEEEETT-EEEEECHHH
T ss_pred ---CCCcEEEEECCCCcEECCHHHHHHHHHHhCCccc-----CCCcEEEeCCCCC----cCceEEEEECC-EEEEECHHH
Confidence 2346899999999999999999999999854321 2345677898765 89999999998 999999999
Q ss_pred eEEecCCCCeEEE-EEEccC-CCceeechhhhcceEEEEECCCCEEEEecCC
Q 047535 323 TFIPPPVEGVFCF-AMQPID-GDVGIFGNFAQSDLFIGYDFDSQMVSFKPTD 372 (376)
Q Consensus 323 y~~~~~~~~~~C~-~i~~~~-~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~ 372 (376)
|+.+. +..|+ +++... .+.||||++|||++|+|||.+++|||||+++
T Consensus 272 y~~~~---~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 272 YTSKD---QGFCTSGFQGDNNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp HEEEE---TTEEEESEEEETTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred hccCC---CCeEEEEEEcCCCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 99874 35786 577643 4679999999999999999999999999874
No 9
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=9.4e-58 Score=429.06 Aligned_cols=304 Identities=19% Similarity=0.345 Sum_probs=257.8
Q ss_pred ceeccccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCC--CCCCC-------CCCCCCCCCCCCCCcccccCCCC
Q 047535 12 VVQSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCL--PCVQC-------YKQVKPIYNPASSSSYKELSCQS 82 (376)
Q Consensus 12 ~~~~~~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~--~C~~c-------~~~~~~~y~~~~Sst~~~~~c~~ 82 (376)
.+.+++...+.+|+++|.||||+| ++.|+|||||+++||++. .|..| .|..++.|+|++|+||+...
T Consensus 2 ~~~~~l~~~~~~Y~~~i~iGtP~q-~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~--- 77 (334)
T 1j71_A 2 DVPTTLINEGPSYAADIVVGSNQQ-KQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLN--- 77 (334)
T ss_dssp CEEEEEEECSSSEEEEEEETTTTE-EEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEE---
T ss_pred ceeEEEecCCcEEEEEEEEcCCCc-EEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCC---
Confidence 356677778899999999999999 999999999999999976 78765 56778899999999999987
Q ss_pred cccCCCCCCCCCCCCCCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeCCCCCCCCCcceEeecCCCCC---
Q 047535 83 EQCHLLDTVSCSSQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTGVFNENEMGLVGLGRTRL--- 159 (376)
Q Consensus 83 ~~c~~~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGL~~~~~--- 159 (376)
|.|.+.|++|+.+.|.+++|+|++++ ++++++.||+++... ..+||||||+...
T Consensus 78 ----------------~~~~i~Yg~Gs~~~G~~~~D~v~~g~--~~~~~~~fg~~~~~~-----~~~GilGLg~~~~~~~ 134 (334)
T 1j71_A 78 ----------------QDFSIEYGDLTSSQGSFYKDTVGFGG--ISIKNQQFADVTTTS-----VDQGIMGIGFTADEAG 134 (334)
T ss_dssp ----------------EEEEEEBTTSCEEEEEEEEEEEEETT--EEEEEEEEEEEEEES-----SSSCEEECSCGGGSST
T ss_pred ----------------CceEEEECCCCEEEEEEEEEEEEECC--EEEccEEEEEEEecC-----CCccEEEEcCCcccCc
Confidence 79999999999778999999999999 889999999998764 4789999999743
Q ss_pred -----hHHHHHHhh--cCCCeEEEecCCCCCCCCccceEEECCCCcccC-CCceeeeeecCCCCceEEEEEeeEEecCCC
Q 047535 160 -----SLASQILSQ--LGANKFSYCLVPFHTDSSITSKMYFGNGSEVSG-GGVVSTSLVSKEDKTYYFVTLEGISVGNLS 231 (376)
Q Consensus 160 -----s~~~ql~~~--~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~-~~~~~~p~~~~~~~~~w~v~~~~i~v~~~~ 231 (376)
+++.+|.++ +..++|++||.+. ....|.|+|||.|..+. +.+.|+|+.. ..+|.|.+++|+|++
T Consensus 135 ~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~---~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~v~l~~i~v~g-- 206 (334)
T 1j71_A 135 YNLYDNVPVTLKKQGIINKNAYSLYLNSE---DASTGKIIFGGVDNAKYTGTLTALPVTS---SVELRVHLGSINFDG-- 206 (334)
T ss_dssp TCCCCCHHHHHHHTTSCSSSEEEEECCCT---TCSEEEEEETEEETTSEEEEEEEEECCC---SSSCEEEEEEEEETT--
T ss_pred cccCCcHHHHHHHCCCCCccEEEEEeCCC---CCCCeEEEEeeechHHccCceEEEEccC---CCeEEEEEeEEEECC--
Confidence 788888877 6678999999864 24579999999766544 3499999987 558999999999999
Q ss_pred CceeeEeccCCCCccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCCCCc-cceeecCCCCCCCCeEEEEe
Q 047535 232 NSSKLIPYYNSSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGS-QLCYKTPSMAGIAPILTAHF 310 (376)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~-~~C~~~~~~~~~~P~i~f~~ 310 (376)
+.+.. ...++|||||++++||++++++|.++|.+... .....+. .+|+ .+|.|+|.|
T Consensus 207 ---~~~~~--------~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~----~~~~~~~~~~C~-------~~p~i~f~f 264 (334)
T 1j71_A 207 ---TSVST--------NADVVLDSGTTITYFSQSTADKFARIVGATWD----SRNEIYRLPSCD-------LSGDAVFNF 264 (334)
T ss_dssp ---EEEEE--------EEEEEECTTCSSEEECHHHHHHHHHHHTCEEE----TTTTEEECSSSC-------CCSEEEEEE
T ss_pred ---EeccC--------CccEEEeCCCCcEecCHHHHHHHHHHcCCccc----CCCceEEEEcCC-------CCCceEEEE
Confidence 77653 24699999999999999999999999876542 1122455 7887 579999999
Q ss_pred cCCceEEECCCceEEecCCCCeEEEE-EEccCCCceeechhhhcceEEEEECCCCEEEEecCCCCC
Q 047535 311 DGGAKVPLIHTSTFIPPPVEGVFCFA-MQPIDGDVGIFGNFAQSDLFIGYDFDSQMVSFKPTDCTK 375 (376)
Q Consensus 311 ~g~~~~~i~~~~y~~~~~~~~~~C~~-i~~~~~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~c~~ 375 (376)
+++..++|++++|+.+.. ++..|+. ++.. +.||||++|||++|+|||++++|||||+++|++
T Consensus 265 ~~g~~~~i~~~~y~~~~~-~~~~C~~~i~~~--~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 327 (334)
T 1j71_A 265 DQGVKITVPLSELILKDS-DSSICYFGISRN--DANILGDNFLRRAYIVYDLDDKTISLAQVKYTS 327 (334)
T ss_dssp STTCEEEEEGGGGEEECS-SSSCEEESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEEECCCS
T ss_pred cCCcEEEECHHHheeecC-CCCeeEEEEeEC--CCcEEChHhhccEEEEEECCCCEEEEEecCCCC
Confidence 655999999999999865 4445864 6654 479999999999999999999999999999975
No 10
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=1.3e-57 Score=429.16 Aligned_cols=309 Identities=21% Similarity=0.348 Sum_probs=259.8
Q ss_pred ceeccccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCC--CCCC-CCCCCCCCCCCCCCcccccCCCCcccCCC
Q 047535 12 VVQSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLP--CVQC-YKQVKPIYNPASSSSYKELSCQSEQCHLL 88 (376)
Q Consensus 12 ~~~~~~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~--C~~c-~~~~~~~y~~~~Sst~~~~~c~~~~c~~~ 88 (376)
.+.+++...+++|+++|.||||+| +++|+|||||+++||++.. |..| .|..++.|+|++|+||+...
T Consensus 2 ~i~~~l~~~~~~Y~~~i~iGtP~Q-~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~~~y~~~~SsT~~~~~--------- 71 (339)
T 3fv3_A 2 SISLSLINEGPSYASKVSVGSNKQ-QQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNLG--------- 71 (339)
T ss_dssp CEEEEEEECSSSEEEEEEETTTTE-EEEEEEETTCCCEEEEEEEEEECTTCCTTTTCCBCGGGCTTCEEEE---------
T ss_pred ceeeEEEcCCCEEEEEEEEcCCCc-EEEEEEeCCCCceEEecCCCCCCCCCCCCCCCcCCCccCcceeeCC---------
Confidence 466788888999999999999999 9999999999999999664 6544 45568899999999999988
Q ss_pred CCCCCCCCCCCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeCCCCCCCCCcceEeecCCCCCh--------
Q 047535 89 DTVSCSSQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTGVFNENEMGLVGLGRTRLS-------- 160 (376)
Q Consensus 89 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGL~~~~~s-------- 160 (376)
|.|.+.|++|+.+.|.++.|+|++++ ++++++.||+++.... .+||||||+...+
T Consensus 72 ----------~~~~i~Yg~gs~~~G~~~~D~v~~g~--~~v~~~~fg~~~~~~~-----~~GilGLg~~~~~~~~~~~~~ 134 (339)
T 3fv3_A 72 ----------AAFTIRYGDGSTSQGTWGKDTVTING--VSITGQQIADVTQTSV-----DQGILGIGYTSNEAVYDTSGR 134 (339)
T ss_dssp ----------EEEEEECTTSCEEEEEEEEEEEEETT--EEEEEEEEEEEEEESS-----SSCEEECSCGGGCCCBCTTSC
T ss_pred ----------ceEEEEECCCceEEEEEEEEEEEECC--EEECceEEEEEEecCC-----CceeEEecCcccccccccccc
Confidence 79999999998779999999999999 8999999999998764 5899999987532
Q ss_pred --------HHHHHHhh--cCCCeEEEecCCCCCCCCccceEEECCCCcccC-CCceeeeeecCCCCceEEEEEeeEEecC
Q 047535 161 --------LASQILSQ--LGANKFSYCLVPFHTDSSITSKMYFGNGSEVSG-GGVVSTSLVSKEDKTYYFVTLEGISVGN 229 (376)
Q Consensus 161 --------~~~ql~~~--~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~-~~~~~~p~~~~~~~~~w~v~~~~i~v~~ 229 (376)
++.+|..+ +..++|++||.... ...|.|+|||+|..+. +.+.|+|+.. ..+|.|.+++|+|++
T Consensus 135 ~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~v~l~~i~v~g 208 (339)
T 3fv3_A 135 QTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPS---AETGTIIFGGVDNAKYSGKLVAEQVTS---SQALTISLASVNLKG 208 (339)
T ss_dssp BCSCCCCCHHHHHHHTTSCSSSEEEEECCCTT---CSEEEEEETEEETTSBSSCCEEEEBCC---SSSCEEEEEEEEESS
T ss_pred ccCccCCcHHHHHHHCCCCCCceEEEEECCCC---CCCeEEEEeeechHHeecceEEEeccc---CccEEEEEEEEEECC
Confidence 78888876 66789999998642 3579999999766544 4599999988 558999999999999
Q ss_pred CCCceeeEeccCCCCccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCCCCccceeecCCCCCCCCeEEEE
Q 047535 230 LSNSSKLIPYYNSSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAH 309 (376)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~ 309 (376)
+.+.. ...++|||||++++||++++++|.++|.+.+... ......+.++|+. . .+|.|+|.
T Consensus 209 -----~~~~~--------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~-~~~~~~~~~~C~~-~----~~p~i~f~ 269 (339)
T 3fv3_A 209 -----SSFSF--------GDGALLDSGTTLTYFPSDFAAQLADKAGARLVQV-ARDQYLYFIDCNT-D----TSGTTVFN 269 (339)
T ss_dssp -----CEEEE--------EEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEE-ETTEEEEEECTTC-C----CCSEEEEE
T ss_pred -----EeecC--------CccEEEeCCCCCEecCHHHHHHHHHHcCCEEccc-cccCceEEEecCC-C----CCCcEEEE
Confidence 76653 2479999999999999999999999987544210 0123446678885 2 68999999
Q ss_pred ecCCceEEECCCceEEecCCCCeEEEEEEccCCCceeechhhhcceEEEEECCCCEEEEecCCCCC
Q 047535 310 FDGGAKVPLIHTSTFIPPPVEGVFCFAMQPIDGDVGIFGNFAQSDLFIGYDFDSQMVSFKPTDCTK 375 (376)
Q Consensus 310 ~~g~~~~~i~~~~y~~~~~~~~~~C~~i~~~~~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~c~~ 375 (376)
|+++..++|++++|+.+.. .+.|+++|+. .+.||||++|||++|+|||.+++|||||+++|++
T Consensus 270 f~~g~~~~v~~~~~~~~~~-~~~C~~~i~~--~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~ 332 (339)
T 3fv3_A 270 FGNGAKITVPNTEYVYQNG-DGTCLWGIQP--SDDTILGDNFLRHAYLLYNLDANTISIAQVKYTT 332 (339)
T ss_dssp ETTSCEEEEEGGGGEEECS-SSCEEESEEE--CSSCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred ECCCCEEEECHHHheeeCC-CCeEEEEEEe--CCcEEeChHHHhCEEEEEECCCCEEEEEecCCCC
Confidence 9755999999999999864 4444477887 4679999999999999999999999999999984
No 11
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=9.9e-58 Score=426.97 Aligned_cols=305 Identities=17% Similarity=0.289 Sum_probs=256.2
Q ss_pred eccccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccCCCCCCCC
Q 047535 14 QSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVSC 93 (376)
Q Consensus 14 ~~~~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~~c 93 (376)
+++.+..+.+|+++|.||||+| ++.|+|||||+++||++..|....|..++.|+|++|+||+...
T Consensus 6 ~~l~n~~~~~Y~~~i~iGtP~q-~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~-------------- 70 (323)
T 3cms_A 6 VPLTNYLDSQYFGKIYLGTPPQ-EFTVLFDTGSSDFWVPSIYCKSNACKNHQRFDPRKSSTFQNLG-------------- 70 (323)
T ss_dssp EEEEEETTTEEEEEEEETTTTE-EEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE--------------
T ss_pred eeeEeccCCEEEEEEEECCCCe-EEEEEEeCCccceEEcCCCCCcccccCCCCCCCccCCCeEECC--------------
Confidence 3445567899999999999999 9999999999999999999965455577899999999999987
Q ss_pred CCCCCCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeCCCC-CC-CCCcceEeecCCCC------ChHHHHH
Q 047535 94 SSQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTG-VF-NENEMGLVGLGRTR------LSLASQI 165 (376)
Q Consensus 94 ~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGL~~~~------~s~~~ql 165 (376)
|.|.+.|++|++ .|.+++|+|++++ ++++++.||+++...+ .| ....+||||||++. .+++.+|
T Consensus 71 -----~~~~i~Yg~Gs~-~G~~~~D~v~ig~--~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l 142 (323)
T 3cms_A 71 -----KPLSIHYGTGSM-QGILGYDTVTVSN--IVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNM 142 (323)
T ss_dssp -----EEEEEEETTEEE-EEEEEEEEEEETT--EEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHHH
T ss_pred -----cEEEEEeCCCCe-EEEEEEEEEEECC--eEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHHH
Confidence 689999999985 7999999999999 8899999999998765 34 45679999999874 3577788
Q ss_pred Hhh--cCCCeEEEecCCCCCCCCccceEEECCCCcccC-CCceeeeeecCCCCceEEEEEeeEEecCCCCceeeEeccCC
Q 047535 166 LSQ--LGANKFSYCLVPFHTDSSITSKMYFGNGSEVSG-GGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYNS 242 (376)
Q Consensus 166 ~~~--~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~-~~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~~~~~ 242 (376)
.++ +..++|++||.+.. ..|.|+|||.|..+. +.+.|+|+.. ..+|.|.+++|+|++ +.+..
T Consensus 143 ~~q~~i~~~~FS~~l~~~~----~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~v~l~~i~v~~-----~~~~~--- 207 (323)
T 3cms_A 143 MNRHLVAQDLFSVYMDRNG----QESMLTLGAIDPSYYTGSLHWVPVTV---QQYWQFTVDSVTISG-----VVVAC--- 207 (323)
T ss_dssp HHTTCSSSSEEEEECCTTS----SCEEEEESCCCGGGEEEEEEEEECSS---BTTBEEEEEEEEETT-----EEEES---
T ss_pred HHCCCCCCCEEEEEECCCC----CCEEEEECCCChhhccCceEEEECcc---CCeEEEEEeeEEECC-----EEeec---
Confidence 876 66799999998642 239999999876554 3499999987 569999999999999 77653
Q ss_pred CCccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCCCCccceeecCCCCCCCCeEEEEecCCceEEECCCc
Q 047535 243 SGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKVPLIHTS 322 (376)
Q Consensus 243 ~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~~~g~~~~~i~~~~ 322 (376)
.....++|||||+++++|++++++|.+++.+... ....+.++|+..+ .+|.|+|.|+| ..++|++++
T Consensus 208 ---~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~-----~~g~~~~~C~~~~----~~P~i~f~f~g-~~~~i~~~~ 274 (323)
T 3cms_A 208 ---EGGCQAILDTGTSKLVGPSSDILNIQQAIGATQN-----QYGEFDIDCDNLS----YMPTVVFEING-KMYPLTPSA 274 (323)
T ss_dssp ---TTCEEEEECTTCCSEEECHHHHHHHHHHHTCEEE-----TTTEEEECTTCTT----TSCCEEEEETT-EEEEECHHH
T ss_pred ---CCCcEEEEecCCccEeCCHHHHHHHHHHhCCeec-----CCCcEEEECCCCc----cCceEEEEECC-EEEEECHHH
Confidence 2346899999999999999999999999864321 1334567898655 89999999987 999999999
Q ss_pred eEEecCCCCeEEE-EEEccC-CCceeechhhhcceEEEEECCCCEEEEecCC
Q 047535 323 TFIPPPVEGVFCF-AMQPID-GDVGIFGNFAQSDLFIGYDFDSQMVSFKPTD 372 (376)
Q Consensus 323 y~~~~~~~~~~C~-~i~~~~-~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~ 372 (376)
|+.+. +..|+ +|+..+ .+.||||++|||++|+|||.+++|||||+++
T Consensus 275 y~~~~---~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 275 YTSQD---QGFCTSGFQSENHSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp HEEEE---TTEEEESEEEC---CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred hccCC---CCEEEEEEEeCCCCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 99983 45786 587753 5789999999999999999999999999864
No 12
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=2.5e-57 Score=425.12 Aligned_cols=305 Identities=22% Similarity=0.286 Sum_probs=255.6
Q ss_pred ccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccCCCCCCCCCCC
Q 047535 17 VSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVSCSSQ 96 (376)
Q Consensus 17 ~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~~c~~~ 96 (376)
....+++|+++|.||||+| +++|+|||||+++||++..|..|.|+.++.|+|++|+||+.++|
T Consensus 10 ~~~~~~~Y~~~i~iGTP~Q-~~~v~~DTGSs~lWv~~~~C~~~~~~~~~~y~~~~SsT~~~~~~---------------- 72 (329)
T 3c9x_A 10 SDSADSEYITSVSIGTPAQ-VLPLDFDTGSSDLWVFSSETPKSSATGHAIYTPSKSSTSKKVSG---------------- 72 (329)
T ss_dssp SSTTCCCEEEEEEETTTTE-EEEEEEETTCCCEEECBTTSCHHHHTTSCCBCGGGCTTCEECTT----------------
T ss_pred CCCCCCEEEEEEEECCCCe-EEEEEEcCCCCCeEEecCCCCccccCCCCcCCcccCcCceEcCC----------------
Confidence 4567789999999999999 99999999999999999999999999999999999999998642
Q ss_pred CCCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeCCCCCC--CCCcceEeecCCCC---------ChHHHHH
Q 047535 97 QLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTGVF--NENEMGLVGLGRTR---------LSLASQI 165 (376)
Q Consensus 97 ~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGL~~~~---------~s~~~ql 165 (376)
|.|.+.|++|+.+.|.+++|+|++++ ++++++.||+++...+.+ ....+||||||+.. .+++.+|
T Consensus 73 --~~~~i~Yg~Gs~~~G~~~~D~v~ig~--~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l 148 (329)
T 3c9x_A 73 --ASWSISYGDGSSSSGDVYTDKVTIGG--FSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNA 148 (329)
T ss_dssp --CBEEEECTTSCEEEEEEEEEEEEETT--EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred --CeEEEEeCCCCcEEEEEEEEEEEECC--EEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHH
Confidence 68999999999668999999999999 889999999999876544 35689999999863 3477888
Q ss_pred HhhcCCCeEEEecCCCCCCCCccceEEECCCCcccC-CCceeeeeecCCCCceEEEEEeeEEecCCCCceeeEeccCCCC
Q 047535 166 LSQLGANKFSYCLVPFHTDSSITSKMYFGNGSEVSG-GGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYNSSG 244 (376)
Q Consensus 166 ~~~~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~-~~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~~~~~~~ 244 (376)
..++..++||+||.. +..|.|+|||.|..+. +.+.|+|+... ..+|.|.+++|+|++ +.+.
T Consensus 149 ~~~i~~~~FS~~l~~-----~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~~v~l~~i~v~~-----~~~~------ 210 (329)
T 3c9x_A 149 ASSLAEPLFTADLRH-----GQNGSYNFGYIDTSVAKGPVAYTPVDNS--QGFWEFTASGYSVGG-----GKLN------ 210 (329)
T ss_dssp HTTSSSSEEEEECCS-----SSCEEEEESSCCGGGCSSCEEEEECBCT--TSSCEEEECCEEETT-----CCCC------
T ss_pred HHhcCCCEEEEEecC-----CCCcEEEEeCcChhhcccceEEEEccCC--CceEEEEEeeEEECC-----Eecc------
Confidence 888888999999975 2469999999876654 45999999853 458999999999999 6543
Q ss_pred ccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCCCCccceeecCCCCCCCCeEEEEecCCceEEECCCceE
Q 047535 245 AISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKVPLIHTSTF 324 (376)
Q Consensus 245 ~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~~~g~~~~~i~~~~y~ 324 (376)
.....++|||||++++||++++++|.++|.+... ......+.++|+. .+|.|+|.|+| ..+.|++++|+
T Consensus 211 -~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~a~~---~~~~~~~~~~C~~------~~P~i~f~f~g-~~~~ip~~~~~ 279 (329)
T 3c9x_A 211 -RNSIDGIADTGTTLLLLDDNVVDAYYANVQSAQY---DNQQEGVVFDCDE------DLPSFSFGVGS-STITIPGDLLN 279 (329)
T ss_dssp -SCCEEEEECTTCCSEEECHHHHHHHHTTCTTCEE---ETTTTEEEEETTC------CCCCEEEEETT-EEEEECGGGGE
T ss_pred -CCCceEEEECCCCcEeCCHHHHHHHHHhCCCcEE---cCCCCEEEEECCC------CCCcEEEEECC-EEEEECHHHee
Confidence 2345899999999999999999999888632111 1112345578873 78999999997 99999999999
Q ss_pred EecCC-CCeEEEE-EEccC-CCceeechhhhcceEEEEECCCCEEEEecC
Q 047535 325 IPPPV-EGVFCFA-MQPID-GDVGIFGNFAQSDLFIGYDFDSQMVSFKPT 371 (376)
Q Consensus 325 ~~~~~-~~~~C~~-i~~~~-~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~ 371 (376)
..... +...|++ |+..+ .+.||||++|||++|+|||.+++|||||+.
T Consensus 280 ~~~~~~~~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 280 LTPLEEGSSTCFGGLQSSSGIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp EEESSTTCSEEEESEEECTTTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred eeccCCCCCeEEEEEEcCCCCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 87531 2478976 77654 578999999999999999999999999974
No 13
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=3e-57 Score=423.98 Aligned_cols=303 Identities=22% Similarity=0.352 Sum_probs=257.4
Q ss_pred ccccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccCCCCCCCCC
Q 047535 15 SNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVSCS 94 (376)
Q Consensus 15 ~~~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~~c~ 94 (376)
++.+..+.+|+++|.||||+| ++.|+|||||+++||++..|..+.|..++.|+|++|+||+...
T Consensus 5 ~l~n~~~~~Y~~~i~iGtP~q-~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~--------------- 68 (324)
T 1am5_A 5 QMKNEADTEYYGVISIGTPPE-SFKVIFDTGSSNLWVSSSHCSAQACSNHNKFKPRQSSTYVETG--------------- 68 (324)
T ss_dssp EEEEETTTEEEEEEEETTTTE-EEEEEEETTCCCEEECBTTCCSHHHHTSCCBCGGGCTTCEEEE---------------
T ss_pred eeecCCCCEEEEEEEECCCCe-EEEEEEeCCCcceEEecCCCCcccccCCCcCCCccCCCeEeCC---------------
Confidence 444567899999999999999 9999999999999999999986556678899999999999987
Q ss_pred CCCCCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeCCCC-CC-CCCcceEeecCCCCC------hHHHHHH
Q 047535 95 SQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTG-VF-NENEMGLVGLGRTRL------SLASQIL 166 (376)
Q Consensus 95 ~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGL~~~~~------s~~~ql~ 166 (376)
|.|.+.|++|+. .|.+++|+|++++ ++++++.||+++...+ .+ ....+||||||+... +++.+|.
T Consensus 69 ----~~~~i~Yg~Gs~-~G~~~~D~v~~g~--~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~ 141 (324)
T 1am5_A 69 ----KTVDLTYGTGGM-RGILGQDTVSVGG--GSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMG 141 (324)
T ss_dssp ----EEEEEECSSCEE-EEEEEEEEEESSS--SCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHH
T ss_pred ----cEEEEEECCCCe-EEEEEECceeECC--cEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhHH
Confidence 689999999988 7999999999999 8899999999998765 34 557899999999743 4677888
Q ss_pred hh--cCCCeEEEecCCCCCCCCccceEEECCCCcccC-CCceeeeeecCCCCceEEEEEeeEEecCCCCceeeEeccCCC
Q 047535 167 SQ--LGANKFSYCLVPFHTDSSITSKMYFGNGSEVSG-GGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYNSS 243 (376)
Q Consensus 167 ~~--~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~-~~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~~~~~~ 243 (376)
++ +..++||+||.+.+ ...|.|+|||.|..+. +.+.|+|+.. ..+|.|.+++|+|++ +.+..
T Consensus 142 ~qg~i~~~~FS~~l~~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~v~l~~i~v~~-----~~~~~---- 206 (324)
T 1am5_A 142 SQSLVEKDLFSFYLSGGG---ANGSEVMLGGVDNSHYTGSIHWIPVTA---EKYWQVALDGITVNG-----QTAAC---- 206 (324)
T ss_dssp HTTCSSSSEEEEECCSTT---CSCEEEEESSCCGGGBCSCCEEEEEEE---ETTEEEEECEEEETT-----EECCC----
T ss_pred hcCCCCCCEEEEEecCCC---CCCcEEEECccCHHHcCCceEEEecCC---CcEEEEEEeEEEECC-----ceeec----
Confidence 76 67799999998752 2479999999876554 4599999987 569999999999999 65431
Q ss_pred CccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCCCCccceeecCCCCCCCCeEEEEecCCceEEECCCce
Q 047535 244 GAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKVPLIHTST 323 (376)
Q Consensus 244 ~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~~~g~~~~~i~~~~y 323 (376)
.. ..++|||||++++||++++++|.+++.+. . ....+.++|+..+ .+|.|+|.|+| ..++|++++|
T Consensus 207 --~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-~-----~~g~~~~~C~~~~----~~P~i~f~f~g-~~~~i~~~~y 272 (324)
T 1am5_A 207 --EG-CQAIVDTGTSKIVAPVSALANIMKDIGAS-E-----NQGEMMGNCASVQ----SLPDITFTING-VKQPLPPSAY 272 (324)
T ss_dssp --CC-EEEEECTTCSSEEECTTTHHHHHHHHTCE-E-----CCCCEECCTTSSS----SSCCEEEEETT-EEEEECHHHH
T ss_pred --cC-ceEEEecCCccEECCHHHHHHHHHHhCCc-c-----cCCcEEEeCCCcc----cCCcEEEEECC-EEEEECHHHh
Confidence 12 68999999999999999999999998654 1 2334667898755 89999999987 9999999999
Q ss_pred EEecCCCCeEEE-EEEccC-----CCceeechhhhcceEEEEECCCCEEEEecCC
Q 047535 324 FIPPPVEGVFCF-AMQPID-----GDVGIFGNFAQSDLFIGYDFDSQMVSFKPTD 372 (376)
Q Consensus 324 ~~~~~~~~~~C~-~i~~~~-----~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~ 372 (376)
+.+. +..|+ +|+..+ .+.||||++|||++|+|||.+++|||||+++
T Consensus 273 ~~~~---~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 273 IEGD---QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp EEES---SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred cccC---CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 9986 35786 677642 4689999999999999999999999999874
No 14
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=3.2e-57 Score=426.94 Aligned_cols=308 Identities=19% Similarity=0.328 Sum_probs=256.9
Q ss_pred ceeccccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCC--CCCCC-------CCCCCCCCCCCCCCcccccCCCC
Q 047535 12 VVQSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCL--PCVQC-------YKQVKPIYNPASSSSYKELSCQS 82 (376)
Q Consensus 12 ~~~~~~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~--~C~~c-------~~~~~~~y~~~~Sst~~~~~c~~ 82 (376)
.+.+++...+.+|+++|.||||+| ++.|+|||||+++||++. .|..| .|..++.|+|++|+||+...
T Consensus 2 ~v~~~l~~~~~~Y~~~i~iGtP~q-~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~--- 77 (342)
T 2qzx_A 2 PVAVTLHNEAITYTADITVGSDNQ-KLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLN--- 77 (342)
T ss_dssp CEEEEEEECSSCEEEEEEETTTTE-EEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEE---
T ss_pred ceeEEEecCCeEEEEEEEECCCCc-EEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCC---
Confidence 345677778899999999999999 999999999999999976 68754 46778899999999999987
Q ss_pred cccCCCCCCCCCCCCCCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeCCCCCCCCCcceEeecCCCCC---
Q 047535 83 EQCHLLDTVSCSSQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTGVFNENEMGLVGLGRTRL--- 159 (376)
Q Consensus 83 ~~c~~~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGL~~~~~--- 159 (376)
|.|.+.|++|+.+.|.+++|+|++++ ++++++.||+++... ..+||||||+...
T Consensus 78 ----------------~~~~i~Yg~Gs~~~G~~~~D~v~~g~--~~v~~~~fg~~~~~~-----~~~GilGLg~~~~~~~ 134 (342)
T 2qzx_A 78 ----------------TRFDIKYGDGSYAKGKLYKDTVGIGG--VSVRDQLFANVWSTS-----ARKGILGIGFQSGEAT 134 (342)
T ss_dssp ----------------EEEEEECTTSCEEEEEEEEEEEEETT--EEEEEEEEEEEEEEC-----SSSCEEECSCGGGCSS
T ss_pred ----------------CcEEEEeCCCCeEEEEEEEEEEEECC--EEecceEEEEEEecC-----CCcCEEEEccccccCC
Confidence 79999999999778999999999999 889999999999764 4789999999743
Q ss_pred -----hHHHHHHhh--cCCCeEEEecCCCCCCCCccceEEECCCCcccC-CCceeeeeecCCCCceEEEEEeeEEecCCC
Q 047535 160 -----SLASQILSQ--LGANKFSYCLVPFHTDSSITSKMYFGNGSEVSG-GGVVSTSLVSKEDKTYYFVTLEGISVGNLS 231 (376)
Q Consensus 160 -----s~~~ql~~~--~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~-~~~~~~p~~~~~~~~~w~v~~~~i~v~~~~ 231 (376)
+++.+|.++ +..++|++||.+. ....|.|+|||.|..+. +.+.|+|+.. ..+|.|.+++|+|++
T Consensus 135 ~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~---~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~v~l~~i~v~g-- 206 (342)
T 2qzx_A 135 EFDYDNLPISLRNQGIIGKAAYSLYLNSA---EASTGQIIFGGIDKAKYSGSLVDLPITS---EKKLTVGLRSVNVRG-- 206 (342)
T ss_dssp SSCCCCHHHHHHHTTSSSSSEEEEECCCT---TCSEEEEEETEEETTSBSSCCEEEECCC---SSSCEEEEEEEEETT--
T ss_pred CccCccHHHHHHHCCCcCccEEEEEeCCC---CCCCeEEEECccchhhEecceEEEeccC---CceEEEEEeEEEECC--
Confidence 788888877 6678999999864 23579999999765544 4599999987 558999999999999
Q ss_pred CceeeEeccCCCCccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCCCCccceeecCCCCCCCCeEEEEec
Q 047535 232 NSSKLIPYYNSSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFD 311 (376)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~~~ 311 (376)
+.+.. ...++|||||++++||++++++|.++|.+....... ....+.++|+ .+|.|+|+|+
T Consensus 207 ---~~~~~--------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~~~-~~~~~~~~C~-------~~p~i~f~f~ 267 (342)
T 2qzx_A 207 ---RNVDA--------NTNVLLDSGTTISYFTRSIVRNILYAIGAQMKFDSA-GNKVYVADCK-------TSGTIDFQFG 267 (342)
T ss_dssp ---EEEEE--------EEEEEECTTCSSEEECHHHHHHHHHHHTCEEEECTT-SCEEEEECTT-------CCCEEEEEET
T ss_pred ---EecCC--------CcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeeeccC-CCcEEEEECC-------CCCcEEEEEC
Confidence 77653 246999999999999999999999998765431111 1224566786 5799999996
Q ss_pred CCceEEECCCceEEecC----CCCeEEEE-EEccCCCceeechhhhcceEEEEECCCCEEEEecCCCCC
Q 047535 312 GGAKVPLIHTSTFIPPP----VEGVFCFA-MQPIDGDVGIFGNFAQSDLFIGYDFDSQMVSFKPTDCTK 375 (376)
Q Consensus 312 g~~~~~i~~~~y~~~~~----~~~~~C~~-i~~~~~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~c~~ 375 (376)
++..++|++++|+.+.. ..+..|+. ++.. +.||||++|||++|+|||++++|||||+++|++
T Consensus 268 ~g~~~~i~~~~~~~~~~~~~~~~~~~C~~~i~~~--~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 334 (342)
T 2qzx_A 268 NNLKISVPVSEFLFQTYYTSGKPFPKCEVRIRES--EDNILGDNFLRSAYVVYNLDDKKISMAPVKYTS 334 (342)
T ss_dssp TTEEEEEEGGGGEECCBCTTSCBCSSEEESEEEC--SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred CCcEEEEcHHHhcccccccCCCCCCccEEEEecC--CCcEeChHhhhcEEEEEECCCCEEEEEeeCCCC
Confidence 55999999999998742 13357965 5554 469999999999999999999999999999975
No 15
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=3.7e-57 Score=424.21 Aligned_cols=306 Identities=22% Similarity=0.377 Sum_probs=257.9
Q ss_pred cccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccCCCCCCCCCC
Q 047535 16 NVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVSCSS 95 (376)
Q Consensus 16 ~~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~~c~~ 95 (376)
|+...+.+|+++|.||||+| +++|+|||||+++||++..|..+.|..++.|+|++|+||+...
T Consensus 6 ~l~~~~~~Y~~~i~iGtP~q-~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~---------------- 68 (329)
T 1htr_B 6 PMAYMDAAYFGEISIGTPPQ-NFLVLFDTGSSNLWVPSVYCQSQACTSHSRFNPSESSTYSTNG---------------- 68 (329)
T ss_dssp GGGGTTCCEEEEEEETTTTE-EEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE----------------
T ss_pred eeEEcCCEEEEEEEECCCCc-EEEEEEcCCCccEEEecCCCCCcccCCCCcCCCccCCCeEECC----------------
Confidence 34477899999999999999 9999999999999999999986556678899999999999987
Q ss_pred CCCCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeCCCC-CC-CCCcceEeecCCCCC------hHHHHHHh
Q 047535 96 QQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTG-VF-NENEMGLVGLGRTRL------SLASQILS 167 (376)
Q Consensus 96 ~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGL~~~~~------s~~~ql~~ 167 (376)
|.|.+.|++|+. .|.+++|+|++++ ++++++.||+++...+ .+ ....+||||||+... +++.+|.+
T Consensus 69 ---~~~~i~Yg~gs~-~G~~~~D~v~~g~--~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 142 (329)
T 1htr_B 69 ---QTFSLQYGSGSL-TGFFGYDTLTVQS--IQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQ 142 (329)
T ss_dssp ---EEEEEEETTEEE-EEEEEEEEEEETT--EEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHH
T ss_pred ---cEEEEEeCCCCe-EEEEEeeeEEEcc--eEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHh
Confidence 699999999987 7999999999999 8899999999998765 34 456899999998753 47788887
Q ss_pred h--cCCCeEEEecCCCCCCCCccceEEECCCCcccC-CCceeeeeecCCCCceEEEEEeeEEecCCCCceeeEeccCCCC
Q 047535 168 Q--LGANKFSYCLVPFHTDSSITSKMYFGNGSEVSG-GGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYNSSG 244 (376)
Q Consensus 168 ~--~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~-~~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~~~~~~~ 244 (376)
+ +..++|++||.+... ...|.|+|||.|..+. +++.|+|+.. ..+|.|.+++|+|++ +.+...
T Consensus 143 qg~i~~~~Fs~~L~~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~v~l~~i~v~~-----~~~~~~---- 208 (329)
T 1htr_B 143 EGALTSPVFSVYLSNQQG--SSGGAVVFGGVDSSLYTGQIYWAPVTQ---ELYWQIGIEEFLIGG-----QASGWC---- 208 (329)
T ss_dssp TTCSSSSEEEEEECSSCS--SEEEEEEESSCCGGGEEEEEEEEEBCS---SSSCEEEECEEEETT-----EECCTT----
T ss_pred cCCCCCCEEEEEEcCCCC--CCCcEEEEcccCHHHcCCceEEEECCC---CceEEEEEeEEEECC-----ceeeec----
Confidence 6 667999999987522 1379999999876554 4599999987 569999999999999 754311
Q ss_pred ccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCCCCccceeecCCCCCCCCeEEEEecCCceEEECCCceE
Q 047535 245 AISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKVPLIHTSTF 324 (376)
Q Consensus 245 ~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~~~g~~~~~i~~~~y~ 324 (376)
.....++|||||++++||++++++|.+++.+... ....+.++|+..+ .+|.|+|.|+| ..++|++++|+
T Consensus 209 -~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~-----~~g~~~~~C~~~~----~~P~i~f~f~g-~~~~i~~~~y~ 277 (329)
T 1htr_B 209 -SEGCQAIVDTGTSLLTVPQQYMSALLQATGAQED-----EYGQFLVNCNSIQ----NLPSLTFIING-VEFPLPPSSYI 277 (329)
T ss_dssp -TTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEEC-----TTSCEEECGGGGG----GSCCEEEEETT-EEEEECHHHHE
T ss_pred -CCCceEEEecCCccEECCHHHHHHHHHHhCCeec-----CCCeEEEeCCCcc----cCCcEEEEECC-EEEEECHHHhc
Confidence 2356899999999999999999999999865431 1234667898765 89999999987 99999999999
Q ss_pred EecCCCCeEEE-EEEccC-----CC-ceeechhhhcceEEEEECCCCEEEEecCC
Q 047535 325 IPPPVEGVFCF-AMQPID-----GD-VGIFGNFAQSDLFIGYDFDSQMVSFKPTD 372 (376)
Q Consensus 325 ~~~~~~~~~C~-~i~~~~-----~~-~~ilG~~fl~~~y~vFD~~~~rIGfa~~~ 372 (376)
.+.. + .|+ +++..+ .+ .||||++|||++|+|||++++|||||+++
T Consensus 278 ~~~~--g-~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 278 LSNN--G-YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp EECS--S-CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ccCC--C-EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 9875 3 886 577642 34 89999999999999999999999999864
No 16
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=5.5e-57 Score=422.85 Aligned_cols=303 Identities=21% Similarity=0.279 Sum_probs=251.9
Q ss_pred cccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccCCCCCCCCCCCC
Q 047535 18 STANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVSCSSQQ 97 (376)
Q Consensus 18 ~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~~c~~~~ 97 (376)
...+++|+++|.||||+| ++.|+|||||+++||++..|..|.| .++.|+|++|+||+.+.|
T Consensus 11 ~~~~~~Y~~~i~iGTP~Q-~~~v~~DTGSs~lWv~~~~C~~~~~-~~~~y~~~~SsT~~~~~~----------------- 71 (329)
T 1oew_A 11 DSLDDAYITPVQIGTPAQ-TLNLDFDTGSSDLWVFSSETTASEV-XQTIYTPSKSTTAKLLSG----------------- 71 (329)
T ss_dssp STTCCCEEEEEEETTTTE-EEEEEEETTCCCEEECBTTSCGGGC--CCCBCGGGCTTCEEEEE-----------------
T ss_pred CCCCCEEEEEEEECCCCe-EEEEEECCCCCCeEEecCCCCcccc-ccCccCCccCccceecCC-----------------
Confidence 457789999999999999 9999999999999999999999988 888999999999998642
Q ss_pred CCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeCCCCCC--CCCcceEeecCCCC---------ChHHHHHH
Q 047535 98 LCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTGVF--NENEMGLVGLGRTR---------LSLASQIL 166 (376)
Q Consensus 98 ~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGL~~~~---------~s~~~ql~ 166 (376)
|.|.+.|++|+.+.|.+++|+|++++ ++++++.||+++...+.+ ....+||||||+.. .+++.+|.
T Consensus 72 -~~~~i~Yg~Gs~~~G~~~~D~v~~g~--~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~ 148 (329)
T 1oew_A 72 -ATWSISYGDGSSSSGDVYTDTVSVGG--LTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAK 148 (329)
T ss_dssp -EEEEEECTTSCEEEEEEEEEEEEETT--EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHT
T ss_pred -CeEEEEeCCCCcEEEEEEEEEEEECC--EEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHH
Confidence 68999999999668999999999999 889999999999876544 35689999999864 34778888
Q ss_pred hhcCCCeEEEecCCCCCCCCccceEEECCCCcccC-CCceeeeeecCCCCceEEEEEeeEEecCCCCceeeEeccCCCCc
Q 047535 167 SQLGANKFSYCLVPFHTDSSITSKMYFGNGSEVSG-GGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYNSSGA 245 (376)
Q Consensus 167 ~~~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~-~~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~~~~~~~~ 245 (376)
+++..++|++||.. +..|.|+|||.|..+. +.+.|+|+... ..+|.|.+++|+|++ +.+.
T Consensus 149 ~~i~~~~FS~~L~~-----~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~~v~l~~i~v~~-----~~~~------- 209 (329)
T 1oew_A 149 ASLDSPVFTADLGY-----HAPGTYNFGFIDTTAYTGSITYTAVSTK--QGFWEWTSTGYAVGS-----GTFK------- 209 (329)
T ss_dssp TTSSSSEEEEECCS-----SSCEEEEESCCCTTSSSSCCEEEECBCT--TSSCEEEEEEEEETT-----SCCE-------
T ss_pred HhccCcEEEEEccC-----CCCeEEEEeccChHhcccceEEEEccCC--CceEEEEEeeEEECC-----eecc-------
Confidence 88888999999975 2469999999776554 45999999843 458999999999999 6553
Q ss_pred cCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCCCCccceeecCCCCCCCCeEEEEecCCceEEECCCceEE
Q 047535 246 ISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKVPLIHTSTFI 325 (376)
Q Consensus 246 ~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~~~g~~~~~i~~~~y~~ 325 (376)
.....++|||||++++||++++++|.++|.+.. .......+.++|+. .+|.|+|.|+| ..++|++++|+.
T Consensus 210 ~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~---~~~~~g~~~~~C~~------~~P~i~f~fgg-~~~~ip~~~~~~ 279 (329)
T 1oew_A 210 STSIDGIADTGTTLLYLPATVVSAYWAQVSGAK---SSSSVGGYVFPCSA------TLPSFTFGVGS-ARIVIPGDYIDF 279 (329)
T ss_dssp EEEEEEEECTTCCSEEECHHHHHHHHTTSTTCE---EETTTTEEEEETTC------CCCCEEEEETT-EEEEECHHHHEE
T ss_pred CCCceEEEeCCCCCEECCHHHHHHHHHhCCCcE---EcCCCCEEEEECCC------CCCcEEEEECC-EEEEECHHHeee
Confidence 134579999999999999999999988863211 11122345578883 78999999976 999999999988
Q ss_pred ecCC-CCeEEEE-EEccC-CCceeechhhhcceEEEEEC-CCCEEEEecC
Q 047535 326 PPPV-EGVFCFA-MQPID-GDVGIFGNFAQSDLFIGYDF-DSQMVSFKPT 371 (376)
Q Consensus 326 ~~~~-~~~~C~~-i~~~~-~~~~ilG~~fl~~~y~vFD~-~~~rIGfa~~ 371 (376)
.... +...|++ |+..+ .+.||||++|||++|+|||+ +++|||||+.
T Consensus 280 ~~~~~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 280 GPISTGSSSCFGGIQSSAGIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp EESSTTCSEEEESEEESTTTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred eecCCCCCeEEEEEEeCCCCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 7531 3468976 66554 57899999999999999999 9999999974
No 17
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=6.2e-56 Score=426.78 Aligned_cols=338 Identities=19% Similarity=0.320 Sum_probs=260.8
Q ss_pred eecccc--ccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccCCCCC
Q 047535 13 VQSNVS--TANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDT 90 (376)
Q Consensus 13 ~~~~~~--~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~ 90 (376)
+..|+. ..+++|+++|.||||+| ++.|+|||||+++||+|..| .+|+||+.+.|.+..|.....
T Consensus 10 ~~~pl~~~~~~~~Y~~~i~iGTP~Q-~~~v~~DTGSs~lWv~~~~~-------------~~Sst~~~~~C~s~~C~~~~~ 75 (403)
T 3aup_A 10 VVLPVQNDGSTGLHWANLQKRTPLM-QVPVLVDLNGNHLWVNCEQQ-------------YSSKTYQAPFCHSTQCSRANT 75 (403)
T ss_dssp EEEEEEECTTTCCEEEEEEETTTTE-EEEEEEETTCSSEEEECSSC-------------CCCSSCBCCCTTBHHHHHTTC
T ss_pred EEEeeecCCCCceEEEEEECCCCCc-eeEEEEECCCCceeECCCCC-------------CCCCCCCccCCCCccccCccc
Confidence 344444 46799999999999999 99999999999999998753 379999999999998976554
Q ss_pred CCC----CC------CCCCeeeEEeC-CCCeeeEEEEEEEEEecCCC---------CCcccEEEeeeeCCCCC-C-CCCc
Q 047535 91 VSC----SS------QQLCNYTYGYA-DSSLTKGVLATERITFGNSN---------NFFDNVVFGCGHNNTGV-F-NENE 148 (376)
Q Consensus 91 ~~c----~~------~~~~~~~~~Y~-~g~~~~G~~~~D~v~i~~~~---------~~~~~~~fg~~~~~~~~-~-~~~~ 148 (376)
..| .+ ++.|.|.+.|+ +++.+.|.+++|+|+|++.. ++++++.|||++..... + ...+
T Consensus 76 ~~c~~c~~~~~s~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~ 155 (403)
T 3aup_A 76 HQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNT 155 (403)
T ss_dssp CCEEECSSSCBTTBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTC
T ss_pred cCccccCCCCCCCCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCC
Confidence 333 11 25799999998 77777999999999998721 46789999999987532 3 4568
Q ss_pred ceEeecCCCCChHHHHHHhh-cCCCeEEEecCCCCCCCCccceEEECCCCcccC----C-----CceeeeeecCCCCceE
Q 047535 149 MGLVGLGRTRLSLASQILSQ-LGANKFSYCLVPFHTDSSITSKMYFGNGSEVSG----G-----GVVSTSLVSKEDKTYY 218 (376)
Q Consensus 149 ~GilGL~~~~~s~~~ql~~~-~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~----~-----~~~~~p~~~~~~~~~w 218 (376)
+||||||+...+++.|+... +..++|++||... ....|.|+||| +..++ + .+.|+|++..+ ..+|
T Consensus 156 dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~---~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~-~~~y 230 (403)
T 3aup_A 156 QGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRY---PTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITL-QGEY 230 (403)
T ss_dssp CEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSC---TTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECT-TSCE
T ss_pred ceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCC---CCCCeeEEECC-CchhccccccccccCceeecccccCC-CCcc
Confidence 99999999999999999765 5568999999864 23579999999 55433 2 69999999853 3699
Q ss_pred EEEEeeEEecCCCCceeeE-eccCCCC---ccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCCCCcccee
Q 047535 219 FVTLEGISVGNLSNSSKLI-PYYNSSG---AISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCY 294 (376)
Q Consensus 219 ~v~~~~i~v~~~~~~~~~~-~~~~~~~---~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~C~ 294 (376)
.|.+++|+|++ +.+ .++...+ ..+...+||||||++++||+++|++|.++|.+.+..............|+
T Consensus 231 ~v~l~~i~v~g-----~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c~ 305 (403)
T 3aup_A 231 NVRVNSIRINQ-----HSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCF 305 (403)
T ss_dssp EECEEEEEETT-----EEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCEE
T ss_pred eEEEEEEEECC-----EEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCceE
Confidence 99999999999 777 5443221 12245699999999999999999999999976553211100111222455
Q ss_pred ecCCCCCCCCeEEEEecCC--ceEEECCCceEEecCCCCeEEEEEEccC---CCceeechhhhcceEEEEECCCCEEEE-
Q 047535 295 KTPSMAGIAPILTAHFDGG--AKVPLIHTSTFIPPPVEGVFCFAMQPID---GDVGIFGNFAQSDLFIGYDFDSQMVSF- 368 (376)
Q Consensus 295 ~~~~~~~~~P~i~f~~~g~--~~~~i~~~~y~~~~~~~~~~C~~i~~~~---~~~~ilG~~fl~~~y~vFD~~~~rIGf- 368 (376)
.... +..+|.|+|.|+|+ ..|+|++++|+++.. ++..|++|+... ...||||+.|||++|+|||++++||||
T Consensus 306 ~c~~-~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~-~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGf~ 383 (403)
T 3aup_A 306 NSNK-INAYPSVDLVMDKPNGPVWRISGEDLMVQAQ-PGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFS 383 (403)
T ss_dssp CGGG-CCCCCCEEEEESSTTCCEEEECHHHHEEEC----CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEEEEE
T ss_pred ECCC-cCcCCcEEEEEcCCCceEEEEcccceEEEcC-CCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEEEEe
Confidence 4332 22799999999995 599999999999875 567899988764 268999999999999999999999999
Q ss_pred ------ecCCCCCC
Q 047535 369 ------KPTDCTKQ 376 (376)
Q Consensus 369 ------a~~~c~~~ 376 (376)
++++|+++
T Consensus 384 A~~~~~~~~~C~~~ 397 (403)
T 3aup_A 384 TSSLHSHGVKCADL 397 (403)
T ss_dssp SSCGGGGTCCGGGS
T ss_pred cccccccCCCcccc
Confidence 77888764
No 18
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=7.9e-57 Score=424.28 Aligned_cols=312 Identities=20% Similarity=0.309 Sum_probs=260.2
Q ss_pred ceeccccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCC--CCCCCCCCCCCCCCcccccCCCCcccCCCC
Q 047535 12 VVQSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQC--YKQVKPIYNPASSSSYKELSCQSEQCHLLD 89 (376)
Q Consensus 12 ~~~~~~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c--~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~ 89 (376)
..+++.+..+.+|+++|.||||+| +++|+|||||+++||++..|..| .|..++.|+|++|+||+...
T Consensus 8 ~~~~l~n~~d~~Y~~~i~iGtP~q-~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~~~y~~~~SsT~~~~~---------- 76 (341)
T 3k1w_A 8 SSVILTNYMDTQYYGEIGIGTPPQ-TFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNG---------- 76 (341)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTE-EEEEEEETTCCCEEEEBTTSCTTCHHHHTSCCBCGGGCTTCEEEE----------
T ss_pred ccccceEccCCEEEEEEEEcCCCc-EEEEEEeCCCcceEEccCCCCCCCCcccCCCCCCCCcCcCeeECC----------
Confidence 445566667899999999999999 99999999999999999999832 45678899999999999877
Q ss_pred CCCCCCCCCCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeCCCCC-C-CCCcceEeecCCCCC------hH
Q 047535 90 TVSCSSQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTGV-F-NENEMGLVGLGRTRL------SL 161 (376)
Q Consensus 90 ~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GilGL~~~~~------s~ 161 (376)
|.|.+.|++|++ .|.+++|+|++++ +++ ++.||+++..... + ...++||||||++.. ++
T Consensus 77 ---------~~~~i~Yg~gs~-~G~~~~D~v~ig~--~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~ 143 (341)
T 3k1w_A 77 ---------TELTLRYSTGTV-SGFLSQDIITVGG--ITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPI 143 (341)
T ss_dssp ---------EEEEEEETTEEE-EEEEEEEEEEETT--EEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCH
T ss_pred ---------CEEEEEECCcEE-EEEEEEEEEEECC--cee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCH
Confidence 799999999995 8999999999999 889 9999999987753 4 556899999999754 36
Q ss_pred HHHHHhh--cCCCeEEEecCCCCC-CCCccceEEECCCCcccCC-CceeeeeecCCCCceEEEEEeeEEecCCCCceeeE
Q 047535 162 ASQILSQ--LGANKFSYCLVPFHT-DSSITSKMYFGNGSEVSGG-GVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLI 237 (376)
Q Consensus 162 ~~ql~~~--~~~~~fs~~l~~~~~-~~~~~G~l~~Gg~~~~~~~-~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~ 237 (376)
+.+|.++ +..++|++||.+... +....|.|+|||+|..+.. .+.|+|+.. ..+|.|.+++|+|++ +.+
T Consensus 144 ~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~w~v~l~~i~v~~-----~~~ 215 (341)
T 3k1w_A 144 FDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK---TGVWQIQMKGVSVGS-----STL 215 (341)
T ss_dssp HHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSS---TTSCEEEECCEEETT-----EEE
T ss_pred HHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCC---CCEEEEEEeEEEECC-----EEe
Confidence 7888877 778999999987531 1134799999998776553 499999986 679999999999999 765
Q ss_pred eccCCCCccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCCCCccceeecCCCCCCCCeEEEEecCCceEE
Q 047535 238 PYYNSSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKVP 317 (376)
Q Consensus 238 ~~~~~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~~~g~~~~~ 317 (376)
.. .....++|||||++++||++++++|.+++.+... ..+ +.++|.... .+|.|+|.|+| ..++
T Consensus 216 ~~------~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~-----~~g-~~~~C~~~~----~~p~i~f~f~g-~~~~ 278 (341)
T 3k1w_A 216 LC------EDGCLALVDTGASYISGSTSSIEKLMEALGAKKR-----LFD-YVVKCNEGP----TLPDISFHLGG-KEYT 278 (341)
T ss_dssp EC------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC-----SSC-EEEEGGGGG----GCCCEEEEETT-EEEE
T ss_pred ec------CCCCEEEEECCCChhcCCHHHHHHHHHHcCCeec-----CCC-eEEeCCCCC----cCCcEEEEECC-EEEE
Confidence 43 2456899999999999999999999999865431 122 777888655 89999999998 9999
Q ss_pred ECCCceEEecCC-CCeEEE-EEEcc-----CCCceeechhhhcceEEEEECCCCEEEEecCC
Q 047535 318 LIHTSTFIPPPV-EGVFCF-AMQPI-----DGDVGIFGNFAQSDLFIGYDFDSQMVSFKPTD 372 (376)
Q Consensus 318 i~~~~y~~~~~~-~~~~C~-~i~~~-----~~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~ 372 (376)
|++++|+.+... ++..|+ +++.. ....||||++|||++|+|||.+++|||||+++
T Consensus 279 l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 279 LTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp ECHHHHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ECHHHheeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 999999988653 257896 57763 25689999999999999999999999999975
No 19
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=1.8e-56 Score=425.71 Aligned_cols=303 Identities=20% Similarity=0.322 Sum_probs=256.9
Q ss_pred eccccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccCCCCCCCC
Q 047535 14 QSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVSC 93 (376)
Q Consensus 14 ~~~~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~~c 93 (376)
.++.+..+.+|+++|.||||+| ++.|+|||||+++||++..|..+.|..++.|+|++|+||+...
T Consensus 54 ~pl~~~~~~~Y~~~i~iGTP~Q-~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~-------------- 118 (375)
T 1miq_A 54 IELDDVANIMFYGEGEVGDNHQ-KFMLIFDTGSANLWVPSKKCNSSGCSIKNLYDSSKSKSYEKDG-------------- 118 (375)
T ss_dssp CCGGGTBCEEEECCCEETTTTE-ECCEEEETTCCCEEEEBTTCCSSGGGGSCCBCGGGCTTCEEEE--------------
T ss_pred EEcccCCCCEEEEEEEECCCCe-EEEEEEeCCCcceEEccCCCCcccccCCCcCCCccCCceEECC--------------
Confidence 3444457799999999999999 9999999999999999999987777788999999999999987
Q ss_pred CCCCCCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeC----CCCCC-CCCcceEeecCCCCC------hHH
Q 047535 94 SSQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHN----NTGVF-NENEMGLVGLGRTRL------SLA 162 (376)
Q Consensus 94 ~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~----~~~~~-~~~~~GilGL~~~~~------s~~ 162 (376)
|.|.+.|++|++ .|.+++|+|++++ +++++ .|||++. .. .| ...++||||||++.. +++
T Consensus 119 -----~~~~i~Yg~Gs~-~G~~~~Dtv~ig~--~~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~s~~~~~~~~ 188 (375)
T 1miq_A 119 -----TKVDITYGSGTV-KGFFSKDLVTLGH--LSMPY-KFIEVTDTDDLEP-IYSSVEFDGILGLGWKDLSIGSIDPIV 188 (375)
T ss_dssp -----EEEEEEETTEEE-EEEEEEEEEEETT--EEEEE-EEEEEEECGGGTT-HHHHSCCCEEEECSSCCTTCSSCCCHH
T ss_pred -----cEEEEEeCCCeE-EEEEEEEEEEEcC--ceECc-EEEEEEecccccc-ccccCCCceEEeCCCCcccccCCCCHH
Confidence 699999999995 8999999999999 88999 9999998 54 44 456899999998743 477
Q ss_pred HHHHhh--cCCCeEEEecCCCCCCCCccceEEECCCCcccC-CCceeeeeecCCCCceEEEEEeeEEecCCCCceeeEec
Q 047535 163 SQILSQ--LGANKFSYCLVPFHTDSSITSKMYFGNGSEVSG-GGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPY 239 (376)
Q Consensus 163 ~ql~~~--~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~-~~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~~ 239 (376)
.+|.++ +..++||+||.+.+ ...|.|+|||.|..+. +++.|+|+.. ..+|.|.++ |+|++ +.+.
T Consensus 189 ~~l~~qg~i~~~~FS~~L~~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~w~v~l~-i~v~g-----~~~~- 255 (375)
T 1miq_A 189 VELKNQNKIDNALFTFYLPVHD---VHAGYLTIGGIEEKFYEGNITYEKLNH---DLYWQIDLD-VHFGK-----QTME- 255 (375)
T ss_dssp HHHHHTTSSSSSEEEEECCTTC---TTEEEEEESSCCGGGEEEEEEEEEBSS---SSSSEEEEE-EEETT-----EEEE-
T ss_pred HHHHhccCcCCCEEEEEecCCC---CCCeEEEEcccCHHHcCCceEEEecCC---CceEEEEEE-EEECC-----EEcc-
Confidence 888876 77799999998752 2579999999876554 4499999986 669999999 99999 7651
Q ss_pred cCCCCccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCCCCccceeecCCCCCCCCeEEEEecCCceEEEC
Q 047535 240 YNSSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKVPLI 319 (376)
Q Consensus 240 ~~~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~~~g~~~~~i~ 319 (376)
...++|||||+++++|++++++|.+++.+... .....+.++|+. + .+|.|+|.|+| ..++|+
T Consensus 256 --------~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~----~~~g~~~~~C~~-~----~~P~i~f~f~g-~~~~l~ 317 (375)
T 1miq_A 256 --------KANVIVDSGTTTITAPSEFLNKFFANLNVIKV----PFLPFYVTTCDN-K----EMPTLEFKSAN-NTYTLE 317 (375)
T ss_dssp --------EEEEEECTTBSSEEECHHHHHHHHHHHTCEEC----TTSSCEEEETTC-T----TCCCEEEECSS-CEEEEC
T ss_pred --------cceEEecCCCccEEcCHHHHHHHHHHhCCccc----CCCCeEEEECCC-C----CCCcEEEEECC-EEEEEC
Confidence 24799999999999999999999999865322 123346788986 3 79999999987 999999
Q ss_pred CCceEEecCC-CCeEEE-EEEccC--CCceeechhhhcceEEEEECCCCEEEEecCC
Q 047535 320 HTSTFIPPPV-EGVFCF-AMQPID--GDVGIFGNFAQSDLFIGYDFDSQMVSFKPTD 372 (376)
Q Consensus 320 ~~~y~~~~~~-~~~~C~-~i~~~~--~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~ 372 (376)
|++|+.+... +...|+ +|+..+ .+.||||++|||++|+|||.+++|||||+++
T Consensus 318 ~~~yi~~~~~~g~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 318 PEYYMNPILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp GGGSEEESSSSSCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred HHHhEeeccCCCCCeEEEEEEECCCCCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 9999998752 235896 788765 3789999999999999999999999999864
No 20
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=2.2e-56 Score=421.48 Aligned_cols=308 Identities=21% Similarity=0.365 Sum_probs=255.3
Q ss_pred eeccccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCC--CCCC-------CCCCCCCCCCCCCCcccccCCCCc
Q 047535 13 VQSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLP--CVQC-------YKQVKPIYNPASSSSYKELSCQSE 83 (376)
Q Consensus 13 ~~~~~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~--C~~c-------~~~~~~~y~~~~Sst~~~~~c~~~ 83 (376)
+.+++...+++|+++|.||||+| +++|++||||+++||++.. |..| .|..++.|+|++|+||+...
T Consensus 3 v~~~l~~~~~~Y~~~i~iGtP~q-~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~---- 77 (342)
T 3pvk_A 3 VPVTLHNEQVTYAADITVGSNNQ-KLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLN---- 77 (342)
T ss_dssp EEEEEEECSSSEEEEEEETTTTE-EEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEE----
T ss_pred cceEEecCCcEEEEEEEEcCCCc-EEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecC----
Confidence 45677778899999999999999 9999999999999999775 7433 45678899999999999988
Q ss_pred ccCCCCCCCCCCCCCCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeCCCCCCCCCcceEeecCCCC-----
Q 047535 84 QCHLLDTVSCSSQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTGVFNENEMGLVGLGRTR----- 158 (376)
Q Consensus 84 ~c~~~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGL~~~~----- 158 (376)
|.|.+.|++|+.+.|.+++|+|+|++ ++++++.||+++... ..+||||||+..
T Consensus 78 ---------------~~~~i~Yg~gs~~~G~~~~D~v~ig~--~~v~~~~fg~~~~~~-----~~~GilGLg~~~~~~~~ 135 (342)
T 3pvk_A 78 ---------------TPFKIGYGDGSSSQGTLYKDTVGFGG--VSIKNQVLADVDSTS-----IDQGILGVGYKTNEAGG 135 (342)
T ss_dssp ---------------EEEEEECSSSCEEEEEEEEEEEEETT--EEEEEEEEEEEEEES-----SSSCEEECSCGGGCSSC
T ss_pred ---------------CeEEEEecCCCeEEEEEEEEEEEECC--EEecceEEEEEEccC-----CCccEEEecCccccccc
Confidence 79999999999778999999999999 899999999998765 478999999975
Q ss_pred --ChHHHHHHhh--cCCCeEEEecCCCCCCCCccceEEECCCCcccC-CCceeeeeecCCCCceEEEEEeeEEecCCCCc
Q 047535 159 --LSLASQILSQ--LGANKFSYCLVPFHTDSSITSKMYFGNGSEVSG-GGVVSTSLVSKEDKTYYFVTLEGISVGNLSNS 233 (376)
Q Consensus 159 --~s~~~ql~~~--~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~-~~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~ 233 (376)
.+++.+|.++ +..++|++||.... ...|.|+|||+|..+. +.+.|+|+.. ..+|.|.+++|+|++
T Consensus 136 ~~~~~~~~L~~qg~i~~~~fs~~l~~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~v~l~~i~v~g---- 205 (342)
T 3pvk_A 136 SYDNVPVTLKKQGVIAKNAYSLYLNSPD---AATGQIIFGGVDNAKYSGSLIALPVTS---DRELRISLGSVEVSG---- 205 (342)
T ss_dssp SSCCHHHHHHHTTSSSSSEEEEECCCTT---CSEEEEEETEEETTSBSSCCEEEECCC---SSSCEEEEEEEEETT----
T ss_pred cCCcHHHHHHhcCCCCCceEEEEeCCCC---CCCcEEEECccCccceeeeeEEeecCc---cceEEEEEeEEEECC----
Confidence 5688999887 66789999997642 3579999999766544 4499999987 558999999999999
Q ss_pred eeeEeccCCCCccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCCCCccceeecCCCCCCCCeEEEEecCC
Q 047535 234 SKLIPYYNSSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGG 313 (376)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~~~g~ 313 (376)
+.+.. ....++|||||++++||++++++|.++|.+...... .....+.++|+ ..|.|+|+|+++
T Consensus 206 -~~~~~-------~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~-~~~~~~~~~C~-------~~p~i~f~f~~g 269 (342)
T 3pvk_A 206 -KTINT-------DNVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQDS-NGNSFYEVDCN-------LSGDVVFNFSKN 269 (342)
T ss_dssp -EEEEE-------EEEEEEECTTCSSEEECHHHHHHHHHHTTCEEEECT-TSCEEEEECSC-------CCSEEEEEESTT
T ss_pred -EEecC-------CCceEEEeCCCCCeecCHHHHHHHHHHcCCeecccC-CCceEEEEecC-------CCCceEEEECCC
Confidence 77764 235799999999999999999999999865543111 11223667888 468999999965
Q ss_pred ceEEECCCceEEecCC-CC---eEEE-EEEccCCCceeechhhhcceEEEEECCCCEEEEecCCCCC
Q 047535 314 AKVPLIHTSTFIPPPV-EG---VFCF-AMQPIDGDVGIFGNFAQSDLFIGYDFDSQMVSFKPTDCTK 375 (376)
Q Consensus 314 ~~~~i~~~~y~~~~~~-~~---~~C~-~i~~~~~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~c~~ 375 (376)
..++|++++|+.+... .+ ..|+ ++.. .+.||||++|||++|+|||.+++|||||+++|+.
T Consensus 270 ~~~~vp~~~~~~~~~~~~g~~~~~C~~~i~~--~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~ 334 (342)
T 3pvk_A 270 AKISVPASEFAASLQGDDGQPYDKCQLLFDV--NDANILGDNFLRSAYIVYDLDDNEISLAQVKYTS 334 (342)
T ss_dssp CEEEEEGGGGEEC----------CEEESEEE--CTTCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred CEEEEcHHHheeeccccCCCcCCeeEEEEee--CCCeEeCHHHHhcEEEEEECCCCEEEEEecCCCC
Confidence 8999999999987421 22 5785 4665 3689999999999999999999999999999974
No 21
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=8.3e-56 Score=427.97 Aligned_cols=303 Identities=20% Similarity=0.290 Sum_probs=256.0
Q ss_pred eccccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccCCCCCCCC
Q 047535 14 QSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVSC 93 (376)
Q Consensus 14 ~~~~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~~c 93 (376)
.++.+..+.+|+++|.||||+| ++.|+|||||+++||++..|..+.|..++.|+|++|+||+..+
T Consensus 130 ~~L~n~~~~~Y~~~I~IGTP~Q-~~~vi~DTGSs~lWV~~~~C~~~~C~~~~~ydps~SsT~~~~~-------------- 194 (453)
T 2bju_A 130 IELVDFQNIMFYGDAEVGDNQQ-PFTFILDTGSANLWVPSVKCTTAGCLTKHLYDSSKSRTYEKDG-------------- 194 (453)
T ss_dssp EEEEEETTTEEEEEEEETTTTE-EEEEEEETTCCCEEEEBTTCCSTTGGGSCCBCGGGCTTCEEEE--------------
T ss_pred eeeEecCCCEEEEEEEECCCCe-EEEEEEECCCcceEEeccCCCccccCCCCcCCCccCCceeECC--------------
Confidence 3444457799999999999999 9999999999999999999987778888999999999999987
Q ss_pred CCCCCCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeCCC--CC-C-CCCcceEeecCCCC------ChHHH
Q 047535 94 SSQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNT--GV-F-NENEMGLVGLGRTR------LSLAS 163 (376)
Q Consensus 94 ~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~~~--~~-~-~~~~~GilGL~~~~------~s~~~ 163 (376)
|.|.+.|++|++ .|.+++|+|++++ ++++ +.|||++... +. + ....+||||||++. .+++.
T Consensus 195 -----~~~~i~YgdGs~-~G~~~~Dtv~ig~--~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~ 265 (453)
T 2bju_A 195 -----TKVEMNYVSGTV-SGFFSKDLVTVGN--LSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVV 265 (453)
T ss_dssp -----EEEEEECSSSEE-EEEEEEEEEEETT--EEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHH
T ss_pred -----cEEEEEcCCCCe-EEEEEEEEEEEeC--cEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHH
Confidence 799999999995 7999999999999 8899 9999999876 42 3 45689999999864 35678
Q ss_pred HHHhh--cCCCeEEEecCCCCCCCCccceEEECCCCcccC-CCceeeeeecCCCCceEEEEEeeEEecCCCCceeeEecc
Q 047535 164 QILSQ--LGANKFSYCLVPFHTDSSITSKMYFGNGSEVSG-GGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYY 240 (376)
Q Consensus 164 ql~~~--~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~-~~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~~~ 240 (376)
+|.++ +..++||+||.+.+ ...|.|+|||.|..+. +++.|+|+.. ..+|.|.++ |+|++ +.+
T Consensus 266 ~L~~qg~i~~~~FS~~L~~~~---~~~G~l~fGg~D~~~y~G~l~~~pv~~---~~~w~V~l~-I~Vgg-----~~~--- 330 (453)
T 2bju_A 266 ELKNQNKIENALFTFYLPVHD---KHTGFLTIGGIEERFYEGPLTYEKLNH---DLYWQITLD-AHVGN-----IML--- 330 (453)
T ss_dssp HHHHTTSSSSCEEEEECCBTT---TBCEEEEESSCCGGGEEEEEEEEEEEE---ETTEEEEEE-EEETT-----EEE---
T ss_pred HHHHCCCCCCCEEEEEeCCCC---CCCeEEEECCCCHHHcCCceEEEecCC---CceEEEEEE-EEECc-----EEe---
Confidence 88877 77799999998752 3579999999876554 4499999987 569999999 99998 542
Q ss_pred CCCCccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCC-CCccceeecCCCCCCCCeEEEEecCCceEEEC
Q 047535 241 NSSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPR-LGSQLCYKTPSMAGIAPILTAHFDGGAKVPLI 319 (376)
Q Consensus 241 ~~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~-~~~~~C~~~~~~~~~~P~i~f~~~g~~~~~i~ 319 (376)
....++|||||+++++|++++++|.+++.+.. .... .+.++|+. + .+|.|+|.|+| ..++|+
T Consensus 331 ------~~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~~-----~~~g~~~~v~C~~-~----~~P~itf~fgg-~~~~l~ 393 (453)
T 2bju_A 331 ------EKANCIVDSGTSAITVPTDFLNKMLQNLDVIK-----VPFLPFYVTLCNN-S----KLPTFEFTSEN-GKYTLE 393 (453)
T ss_dssp ------EEEEEEECTTCCSEEECHHHHHHHTTTSSCEE-----CTTSSCEEEETTC-T----TCCCEEEECSS-CEEEEC
T ss_pred ------ccccEEEcCCCCeEecCHHHHHHHHHHhCCcc-----cCCCceEEEecCC-C----CCCcEEEEECC-EEEEEC
Confidence 13479999999999999999999998875421 1123 46778986 3 79999999987 999999
Q ss_pred CCceEEecCC-CCeEEE-EEEccC--CCceeechhhhcceEEEEECCCCEEEEecCC
Q 047535 320 HTSTFIPPPV-EGVFCF-AMQPID--GDVGIFGNFAQSDLFIGYDFDSQMVSFKPTD 372 (376)
Q Consensus 320 ~~~y~~~~~~-~~~~C~-~i~~~~--~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~ 372 (376)
|++|+.+... ++..|+ +++..+ .+.||||++|||++|+|||.+++|||||+++
T Consensus 394 ~~~yi~~~~~~g~~~C~~~~~~~~~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 394 PEYYLQHIEDVGPGLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp HHHHEEECTTTSTTEEEECEEECCCSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred HHHhEeecccCCCceEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 9999998753 346896 687765 3589999999999999999999999999875
No 22
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=2.2e-55 Score=411.35 Aligned_cols=301 Identities=20% Similarity=0.255 Sum_probs=250.6
Q ss_pred cccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccCCCCCCCCCCCC
Q 047535 18 STANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVSCSSQQ 97 (376)
Q Consensus 18 ~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~~c~~~~ 97 (376)
...+.+|+++|.|| +| +++|+|||||+++||++..|..|.|+.++.|+|++|+ ++...
T Consensus 10 ~~~~~~Y~~~i~iG--~Q-~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~~------------------ 67 (325)
T 1ibq_A 10 QNNDEEYLTPVTVG--KS-TLHLDFDTGSADLWVFSDELPSSEQTGHDLYTPSSSA-TKLSG------------------ 67 (325)
T ss_dssp CTTTSCEEEEEEEB--TE-EEEEEEETTCCCEEEECTTSCHHHHTTSCCCBCCSSC-EECTT------------------
T ss_pred cCCCCEEEEEEEEC--CE-EEEEEEeCCCccceEeeCCCCccccCCCCCCCchhcC-CccCC------------------
Confidence 34678999999999 79 9999999999999999999999999999999999998 55434
Q ss_pred CCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeCCCCCC--CCCcceEeecCCCCC---------hHHHHHH
Q 047535 98 LCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTGVF--NENEMGLVGLGRTRL---------SLASQIL 166 (376)
Q Consensus 98 ~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGL~~~~~---------s~~~ql~ 166 (376)
|.|.+.|++|+.+.|.+++|+|++++ ++++++.||+++.....+ ...++||||||+... +++.+|.
T Consensus 68 -~~~~i~Yg~Gs~~~G~~~~D~v~ig~--~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~ 144 (325)
T 1ibq_A 68 -YSWDISYGDGSSASGDVYRDTVTVGG--VTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVK 144 (325)
T ss_dssp -CBEEEECSSSCEEEEEEEEEEEEETT--EEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHG
T ss_pred -CEEEEEeCCCCEEEEEEEEeEEEECC--EEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHH
Confidence 79999999999668999999999999 889999999999876544 256899999998643 3678888
Q ss_pred hhcCCCeEEEecCCCCCCCCccceEEECCCCcccC-CCceeeeeecCCCCceEEEEEeeEEecCCCCceeeEeccCCCCc
Q 047535 167 SQLGANKFSYCLVPFHTDSSITSKMYFGNGSEVSG-GGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYNSSGA 245 (376)
Q Consensus 167 ~~~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~-~~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~~~~~~~~ 245 (376)
+++..++||+||.. +..|.|+|||.|..+. +.+.|+|+... ..+|.|.+++|+|++ +.+.
T Consensus 145 ~~i~~~~FS~~l~~-----~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~w~v~l~~i~v~~-----~~~~------- 205 (325)
T 1ibq_A 145 SQLDSPLFAVQLKH-----DAPGVYDFGYIDDSKYTGSITYTDADSS--QGYWGFSTDGYSIGD-----GSSS------- 205 (325)
T ss_dssp GGSSSSEEEEEEET-----TEEEEEEESSCCGGGBSSCCEEEECBCT--TSSCEEEECEEEETT-----SCCB-------
T ss_pred HhcCCcEEEEEecC-----CCCceEEECCcChhhccCceEEEEcCCC--CceEEEEECcEEECC-----eecc-------
Confidence 88888999999974 2579999999876554 45999999842 458999999999999 6543
Q ss_pred cCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCCCCccceeecCCCCCCCCeEEEEecCCceEEECCCceEE
Q 047535 246 ISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKVPLIHTSTFI 325 (376)
Q Consensus 246 ~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~~~g~~~~~i~~~~y~~ 325 (376)
.....++|||||++++||++++++|.++|.+.. .......+.++|+. .+|.|+|.|+| ..++|++++|+.
T Consensus 206 ~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~---~~~~~g~~~~~C~~------~~P~i~f~fgg-~~~~i~~~~~~~ 275 (325)
T 1ibq_A 206 SSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQ---ESYEAGGYVFSCST------DLPDFTVVIGD-YKAVVPGKYINY 275 (325)
T ss_dssp SCCEEEEECTTCCSEEECHHHHHHHHTTSTTCB---CCSSSSSCEEETTC------CCCCEEEEETT-EEEEECHHHHEE
T ss_pred CCCceEEEeCCCCcEeCCHHHHHHHHHhCCCce---EcCcCCeEEEEcCC------CCCcEEEEECC-EEEEECHHHhcc
Confidence 234689999999999999999999998873211 11123446678883 78999999977 999999999988
Q ss_pred ecCC-CCeEEEE-EEccC-CCceeechhhhcceEEEEECCCCEEEEecCC
Q 047535 326 PPPV-EGVFCFA-MQPID-GDVGIFGNFAQSDLFIGYDFDSQMVSFKPTD 372 (376)
Q Consensus 326 ~~~~-~~~~C~~-i~~~~-~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~ 372 (376)
.... +...|+. ++..+ .+.||||++|||++|+|||++++|||||+++
T Consensus 276 ~~~~~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 276 APVSTGSSTCYGGIQSNSGLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp EESSTTCSEEEESEEECTTTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred cccCCCCCeEEEEEEcCCCCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 7532 2368976 66654 5789999999999999999999999999864
No 23
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.7e-55 Score=426.29 Aligned_cols=306 Identities=18% Similarity=0.222 Sum_probs=258.0
Q ss_pred cceeccccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccCCCCC
Q 047535 11 NVVQSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDT 90 (376)
Q Consensus 11 ~~~~~~~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~ 90 (376)
...+++.+..+.+|+++|.|||||| ++.|++||||+++||++..|....|..++.|+|++|+||+..+
T Consensus 126 ~~~~pL~n~~d~~Y~~~I~IGTPpQ-~~~vi~DTGSs~lWV~s~~C~s~~C~~~~~ydps~SsT~~~~~----------- 193 (451)
T 3qvc_A 126 FDNVELKDLANVLSFGEAKLGDNGQ-KFNFLFHTASSNVWVPSIKCTSESCESKNHYDSSKSKTYEKDD----------- 193 (451)
T ss_dssp -CCCCGGGGBCEEEEEEEEETTTTE-EEEEEEESSBCSEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEE-----------
T ss_pred CCccceeecCCCEEEEEEEECCCCc-EEEEEEcCCCccEEEecCCCCccccCCCCCCCCCCCcccccCC-----------
Confidence 3444555567899999999999999 9999999999999999999976666778899999999999877
Q ss_pred CCCCCCCCCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeC----CCCCC-CCCcceEeecCCCC------C
Q 047535 91 VSCSSQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHN----NTGVF-NENEMGLVGLGRTR------L 159 (376)
Q Consensus 91 ~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~----~~~~~-~~~~~GilGL~~~~------~ 159 (376)
+.+.+.|++|+ +.|.++.|+|++++ ++++ +.||+++. ..+ + ....+||||||++. .
T Consensus 194 --------~~f~i~YgdGs-~~G~~~~Dtv~igg--~~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg~~~~s~~~~~ 260 (451)
T 3qvc_A 194 --------TPVKLTSKAGT-ISGIFSKDLVTIGK--LSVP-YKFIEMTEIVGFEPF-YSESDVDGVFGLGWKDLSIGSID 260 (451)
T ss_dssp --------EEEEEECSSEE-EEEEEEEEEEEETT--EEEE-EEEEEEEEEEECTTH-HHHSCCCEEEECSSBCSSSSCCC
T ss_pred --------CEEEEEECCCE-EEEEEEEEEEEECC--EEEE-EEEEEEEeccccCCC-ccCCCCCEEEecCCCcccccCCC
Confidence 69999999999 58999999999999 8899 99999988 555 5 45679999999864 4
Q ss_pred hHHHHHHhh--cCCCeEEEecCCCCCCCCccceEEECCCCcccCC-CceeeeeecCCCCceEEEEEeeEEecCCCCceee
Q 047535 160 SLASQILSQ--LGANKFSYCLVPFHTDSSITSKMYFGNGSEVSGG-GVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKL 236 (376)
Q Consensus 160 s~~~ql~~~--~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~~-~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~ 236 (376)
+++.+|.++ +..++||+||.+.. ...|.|+|||.|..+.. ++.|+|+.. ..+|.|.++ |+|++ +
T Consensus 261 ~~~~~L~~qg~I~~~~FS~~L~~~~---~~~G~l~fGgiD~s~y~G~l~~~pv~~---~~~w~v~l~-I~Vgg-----~- 327 (451)
T 3qvc_A 261 PYIVELKTQNKIEQAVYSIYLPPEN---KNKGYLTIGGIEERFFDGPLNYEKLNH---DLMWQVDLD-VHFGN-----V- 327 (451)
T ss_dssp CHHHHHHHTTSSSSSEEEEECCTTC---TTEEEEEESSCCGGGEEEEEEEEECSS---TTSSEEEEE-EEETT-----E-
T ss_pred CHHHHHHHcCCCCCCEEEEEEcCCC---CCCCEEEECCcchhhcCCceEEEEccc---CCeeEEEEE-EEECC-----c-
Confidence 578888887 77899999998762 35799999998876554 499999986 679999999 99999 6
Q ss_pred EeccCCCCccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCCCCccceeecCCCCCCCCeEEEEecCCceE
Q 047535 237 IPYYNSSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKV 316 (376)
Q Consensus 237 ~~~~~~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~~~g~~~~ 316 (376)
. .....++|||||+++++|++++++|.+++.+... .....+.++|. .. .+|.|+|.|+| ..+
T Consensus 328 -~-------~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~----~~~g~y~v~C~-~~----~~P~itf~fgg-~~i 389 (451)
T 3qvc_A 328 -S-------SKKANVILDSATSVITVPTEFFNQFVESASVFKV----PFLSLYVTTCG-NT----KLPTLEYRSPN-KVY 389 (451)
T ss_dssp -E-------EEEEEEEECTTBSSEEECHHHHHHHHTTTTCEEC----TTSSCEEEETT-CT----TCCCEEEEETT-EEE
T ss_pred -c-------CCCceEEEeCCCccccCCHHHHHHHHHHcCCeec----CCCCeEEeeCC-cC----cCCcEEEEECC-EEE
Confidence 1 1345799999999999999999999998754322 12345667887 33 89999999998 999
Q ss_pred EECCCceEEecCC-CCeEEE-EEEccC--CCceeechhhhcceEEEEECCCCEEEEecCC
Q 047535 317 PLIHTSTFIPPPV-EGVFCF-AMQPID--GDVGIFGNFAQSDLFIGYDFDSQMVSFKPTD 372 (376)
Q Consensus 317 ~i~~~~y~~~~~~-~~~~C~-~i~~~~--~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~ 372 (376)
+|+|++|+.+... ++..|+ ++++.+ .+.||||++|||++|+|||.+++|||||+++
T Consensus 390 ~lp~~~yi~~~~~~~~~~C~~~i~~~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 390 TLEPKQYLEPLENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp EECHHHHEEECTTTSTTEEEECEEECCCSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEcHHHheeecccCCCCeEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 9999999998652 345774 677765 5789999999999999999999999999974
No 24
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=3.3e-55 Score=409.64 Aligned_cols=299 Identities=18% Similarity=0.237 Sum_probs=249.5
Q ss_pred cccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccCCCCCCCCCCCC
Q 047535 18 STANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVSCSSQQ 97 (376)
Q Consensus 18 ~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~~c~~~~ 97 (376)
...+.+|+++|.|| +| +++|+|||||+++||++..|..|.|+.++.|+|++|+ ++...
T Consensus 11 ~~~~~~Y~~~i~iG--~q-~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~~------------------ 68 (323)
T 1izd_A 11 TSNDEEYITQVTVG--DD-TLGLDFDTGSADLWVFSSQTPSSERSGHDYYTPGSSA-QKIDG------------------ 68 (323)
T ss_dssp CGGGCCEEEEEEET--TE-EEEEEEETTCCCEEECBTTSCHHHHTTCCCBCCCTTC-EEEEE------------------
T ss_pred cCCCCEEEEEEEEC--CE-EEEEEEcCCCcceEEecCCCCcccccCCCCCCccccC-CccCC------------------
Confidence 34778999999999 69 9999999999999999999999999899999999999 65444
Q ss_pred CCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeCCCCCC--CCCcceEeecCCCCC---------hHHHHHH
Q 047535 98 LCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTGVF--NENEMGLVGLGRTRL---------SLASQIL 166 (376)
Q Consensus 98 ~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGL~~~~~---------s~~~ql~ 166 (376)
|.|.+.|++|+.+.|.+++|+|++++ ++++++.||+++.....+ ...++||||||++.. +++.+|.
T Consensus 69 -~~~~i~Yg~Gs~~~G~~~~D~v~ig~--~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~ 145 (323)
T 1izd_A 69 -ATWSISYGDGSSASGDVYKDKVTVGG--VSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVK 145 (323)
T ss_dssp -EEEEEECTTSCEEEEEEEEEEEEETT--EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHG
T ss_pred -CeEEEEcCCCCeEEEEEEEEEEEECC--EEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHH
Confidence 68999999999668999999999999 889999999999876544 356899999998643 4678888
Q ss_pred hhcCCCeEEEecCCCCCCCCccceEEECCCCcccC-CCceeeeeecCCCCceEEEEEeeEEecCCCCceeeEeccCCCCc
Q 047535 167 SQLGANKFSYCLVPFHTDSSITSKMYFGNGSEVSG-GGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYNSSGA 245 (376)
Q Consensus 167 ~~~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~-~~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~~~~~~~~ 245 (376)
+++..++||+||... ..|.|+|||.|..+. +.+.|+|+... ..+|.|.+++|+|++ + +.
T Consensus 146 ~~i~~~~FS~~L~~~-----~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~w~v~l~~i~v~~-----~-~~------- 205 (323)
T 1izd_A 146 SSLSEPIFAVALKHN-----APGVYDFGYTDSSKYTGSITYTDVDNS--QGFWGFTADGYSIGS-----D-SS------- 205 (323)
T ss_dssp GGSSSSEEEEECCTT-----SCEEEEESSCCTTSEEEEEEEEECBCT--TSSCEEEESEEEETT-----E-EE-------
T ss_pred HhccCcEEEEEccCC-----CCCEEEECCcCccccccceEEEECCCC--CceEEEEECeEEECC-----c-cc-------
Confidence 888889999999752 469999999776554 34999999742 558999999999998 4 22
Q ss_pred cCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCCCCccceeecCCCCCCCCeEEEEecCCceEEECCCceEE
Q 047535 246 ISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKVPLIHTSTFI 325 (376)
Q Consensus 246 ~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~~~g~~~~~i~~~~y~~ 325 (376)
.....++|||||+++++|++++++|.++|.+.. .......+.++|+. .+|.|+|.|+| ..++|++++|+.
T Consensus 206 ~~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~---~~~~~g~~~~~C~~------~~P~i~f~fgg-~~~~i~~~~~~~ 275 (323)
T 1izd_A 206 SDSITGIADTGTTLLLLDDSIVDAYYEQVNGAS---YDSSQGGYVFPSSA------SLPDFSVTIGD-YTATVPGEYISF 275 (323)
T ss_dssp CCCEEEEECTTCCSEEECHHHHHHHHTTSTTCE---EETTTTEEEEETTC------CCCCEEEEETT-EEEEECHHHHEE
T ss_pred CCCceEEEeCCCcceeCCHHHHHHHHHhCCCcE---EcCcCCEEEEECCC------CCceEEEEECC-EEEecCHHHeEE
Confidence 234589999999999999999999998873211 11122345677873 78999999977 999999999998
Q ss_pred ecCCCCeEEEE-EEccC-CCceeechhhhcceEEEEECCCCEEEEecCC
Q 047535 326 PPPVEGVFCFA-MQPID-GDVGIFGNFAQSDLFIGYDFDSQMVSFKPTD 372 (376)
Q Consensus 326 ~~~~~~~~C~~-i~~~~-~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~ 372 (376)
... ++..|+. ++..+ .+.||||++|||++|+|||.+++|||||+++
T Consensus 276 ~~~-~~~~C~~~i~~~~~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 276 ADV-GNGQTFGGIQSNSGIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp EEC-STTEEEESEEECTTTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ecC-CCCeEEEEEEcCCCCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 764 4578976 77654 5789999999999999999999999999863
No 25
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=2.9e-55 Score=411.17 Aligned_cols=302 Identities=17% Similarity=0.230 Sum_probs=253.0
Q ss_pred ccccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCC--CCCCCCCCCCCCCCCCcccccCCCCcccCCCCCCC
Q 047535 15 SNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCV--QCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVS 92 (376)
Q Consensus 15 ~~~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~--~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~~ 92 (376)
++.+..+..|+++|.|| +| ++.|+|||||+++||++..|. .|.+..++.|+|++| ||+...
T Consensus 10 ~l~n~~~~~Y~~~i~iG--~Q-~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~~~y~~~~S-T~~~~~------------- 72 (330)
T 1yg9_A 10 LVHVFINTQYAGITKIG--NQ-NFLTVFDSTSCNVVVASQECVGGACVCPNLQKYEKLKP-KYISDG------------- 72 (330)
T ss_dssp CEEEEECTTSEEEEEET--TE-EEEEEEETTCCCEEEECTTCCSGGGGSTTCCCCCCSSC-EEEEEE-------------
T ss_pred eeecCCCCEEEEEEEEC--CE-EEEEEEeCCCcceEEecCCCCCccCcccccCccCCCCC-ceEECC-------------
Confidence 33445778999999999 79 999999999999999999997 464477889999999 999877
Q ss_pred CCCCCCCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeCCCCCC-CCCcceEeecCCCCCh-------HHHH
Q 047535 93 CSSQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTGVF-NENEMGLVGLGRTRLS-------LASQ 164 (376)
Q Consensus 93 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~~~~~~-~~~~~GilGL~~~~~s-------~~~q 164 (376)
+.|.+.|++|+. .|.+++|+|++++ ++++++.||+++.....| ...++||||||++..+ ++.+
T Consensus 73 ------~~~~i~Yg~Gs~-~G~~~~Dtv~ig~--~~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~ 143 (330)
T 1yg9_A 73 ------NVQVKFFDTGSA-VGRGIEDSLTISQ--LTTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNALKGKTVLEN 143 (330)
T ss_dssp ------EEEEEETTTEEE-EEEEEEEEEEETT--EEEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTTSCCCHHHH
T ss_pred ------CEEEEEECCceE-EEEEEEEEEEECC--EEEcCeEEEEEEEcccccccccCceEEEcCcchhccccCCCCHHHH
Confidence 689999999998 8999999999999 889999999999874334 4568999999997655 7888
Q ss_pred HHhh--cCCCeEEEecCCCCCCCCccceEEECCCCcccC-CCceeeeeecCCCCceEEEEEeeEEecCCCCceeeEeccC
Q 047535 165 ILSQ--LGANKFSYCLVPFHTDSSITSKMYFGNGSEVSG-GGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYN 241 (376)
Q Consensus 165 l~~~--~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~-~~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~~~~ 241 (376)
|.++ + .++||+||.+.. +....|.|+|||.|..+. +++.|+|+.. ..+|.|.+++|+|++ +.+.
T Consensus 144 l~~qg~i-~~~FS~~l~~~~-~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~w~v~l~~i~v~~-----~~~~--- 210 (330)
T 1yg9_A 144 FVEENLI-APVFSIHHARFQ-DGEHFGEIIFGGSDWKYVDGEFTYVPLVG---DDSWKFRLDGVKIGD-----TTVA--- 210 (330)
T ss_dssp HHHTTSS-CSEEEEEEEECT-TSCEEEEEEETSCCGGGEEEEEEEEEBSC---TTSCCEECSEEEETT-----EEEE---
T ss_pred HHhcCCC-CceEEEEEcCCC-CCCCCCEEEECCcCHHHccCceEEEECCC---CCEEEEEeCeEEECC-----EEEc---
Confidence 8876 7 889999998652 122379999999876554 3499999985 669999999999999 7654
Q ss_pred CCCccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCC--CC-ccceeecCCCCCCCCeEEEEecCCceEEE
Q 047535 242 SSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPR--LG-SQLCYKTPSMAGIAPILTAHFDGGAKVPL 318 (376)
Q Consensus 242 ~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~--~~-~~~C~~~~~~~~~~P~i~f~~~g~~~~~i 318 (376)
.....++|||||+++++|++++++|.+++.+... ... .+ .++|.... .+|.|+|.|+| ..++|
T Consensus 211 ----~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~-----~~g~~~~~~~~C~~~~----~~p~i~f~fgg-~~~~l 276 (330)
T 1yg9_A 211 ----PAGTQAIIDTSKAIIVGPKAYVNPINEAIGCVVE-----KTTTRRICKLDCSKIP----SLPDVTFVING-RNFNI 276 (330)
T ss_dssp ----CTTCEEEECTTCSSEEEEHHHHHHHHHHHTCEEE-----ECSSCEEEEECGGGGG----GSCCEEEEETT-EEEEE
T ss_pred ----CCCcEEEEecCCccccCCHHHHHHHHHHhCCccc-----CCCceEEEEEECCCcc----ccCcEEEEECC-EEEEE
Confidence 1346899999999999999999999999865431 112 45 67788654 78999999987 99999
Q ss_pred CCCceEEecCCCCeEEE-EEEccC-CCceeechhhhcceEEEEECCCCEEEEecCC
Q 047535 319 IHTSTFIPPPVEGVFCF-AMQPID-GDVGIFGNFAQSDLFIGYDFDSQMVSFKPTD 372 (376)
Q Consensus 319 ~~~~y~~~~~~~~~~C~-~i~~~~-~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~ 372 (376)
++++|+.+. +..|+ +++... .+.||||++|||++|+|||.+++|||||+++
T Consensus 277 ~~~~y~~~~---~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 277 SSQYYIQQN---GNLCYSGFQPCGHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp CHHHHEEEE---TTEEEESEEEETTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CHHHhcccC---CCcEEEEEEeCCCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 999999986 35786 576643 5689999999999999999999999999864
No 26
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=3.8e-55 Score=409.34 Aligned_cols=299 Identities=19% Similarity=0.280 Sum_probs=248.5
Q ss_pred cccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccCCCCCCCCCCCC
Q 047535 18 STANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVSCSSQQ 97 (376)
Q Consensus 18 ~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~~c~~~~ 97 (376)
...+.+|+++|.|| +| ++.|+|||||+++||++..|..|.|+.++.|||++|+ ++...
T Consensus 11 ~~~~~~Y~~~i~iG--~Q-~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~~------------------ 68 (323)
T 1bxo_A 11 TANDEEYITPVTIG--GT-TLNLNFDTGSADLWVFSTELPASQQSGHSVYNPSATG-KELSG------------------ 68 (323)
T ss_dssp CGGGSCEEEEEEET--TE-EEEEEEETTCCCEEECBTTSCHHHHTTSCCBCHHHHC-EEEEE------------------
T ss_pred cCCCCEEEEEEEEC--CE-EEEEEEeCCCcceEEecCCCCchhccCCCCCCcccCC-cccCC------------------
Confidence 34778999999999 79 9999999999999999999999999999999999998 66545
Q ss_pred CCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeCCCCCC--CCCcceEeecCCCC---------ChHHHHHH
Q 047535 98 LCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTGVF--NENEMGLVGLGRTR---------LSLASQIL 166 (376)
Q Consensus 98 ~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGL~~~~---------~s~~~ql~ 166 (376)
|.|.+.|++|+.+.|.+++|+|++++ ++++++.||+++.....+ ....+||||||++. .+++.+|.
T Consensus 69 -~~~~i~Yg~Gs~~~G~~~~D~v~ig~--~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~ 145 (323)
T 1bxo_A 69 -YTWSISYGDGSSASGNVFTDSVTVGG--VTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVK 145 (323)
T ss_dssp -EEEEEECTTSCEEEEEEEEEEEEETT--EEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHG
T ss_pred -CeEEEEeCCCCeEEEEEEEEEEEECC--EEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHH
Confidence 69999999999668999999999999 889999999999876544 25689999999863 34778888
Q ss_pred hhcCCCeEEEecCCCCCCCCccceEEECCCCcccC-CCceeeeeecCCCCceEEEEEeeEEecCCCCceeeEeccCCCCc
Q 047535 167 SQLGANKFSYCLVPFHTDSSITSKMYFGNGSEVSG-GGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYNSSGA 245 (376)
Q Consensus 167 ~~~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~-~~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~~~~~~~~ 245 (376)
+++..++||+||.. +..|.|+|||.|..+. +.+.|+|+... ..+|.|.+++|+|++ . .
T Consensus 146 ~~i~~~~FS~~L~~-----~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~w~v~l~~i~v~~-----~--~------- 204 (323)
T 1bxo_A 146 SSLAQPLFAVALKH-----QQPGVYDFGFIDSSKYTGSLTYTGVDNS--QGFWSFNVDSYTAGS-----Q--S------- 204 (323)
T ss_dssp GGBSSSEEEEECCS-----SSCEEEEESSCCGGGBSSCCEEEECBCT--TSSCEEEEEEEEETT-----E--E-------
T ss_pred HhcCCcEEEEEEeC-----CCCceEEEeCcChhhccCceEEEECCCC--CCeEEEEEeeEEECC-----c--c-------
Confidence 88888999999975 2469999999876554 45999999753 458999999999988 2 1
Q ss_pred cCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCCCCccceeecCCCCCCCCeEEEEecCCceEEECCCceEE
Q 047535 246 ISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKVPLIHTSTFI 325 (376)
Q Consensus 246 ~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~~~g~~~~~i~~~~y~~ 325 (376)
.....++|||||+++++|++++++|.++|.+... ......+.++|+. .+|.|+|.|+| ..++|++++|+.
T Consensus 205 ~~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~~---~~~~g~~~~~C~~------~~P~i~f~fgg-~~~~l~~~~~~~ 274 (323)
T 1bxo_A 205 GDGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQ---DSNAGGYVFDCST------NLPDFSVSISG-YTATVPGSLINY 274 (323)
T ss_dssp EEEEEEEECTTCSSEEECHHHHHHHHTTSTTCEE---ETTTTEEEECTTC------CCCCEEEEETT-EEEEECHHHHEE
T ss_pred CCCceEEEeCCCCceeCCHHHHHHHHHhCCCceE---cCcCCEEEEECCC------CCceEEEEECC-EEEEECHHHeEE
Confidence 1234799999999999999999999988732111 1123345678883 78999999977 999999999998
Q ss_pred ecCCCCeEEEE-EEccC-CCceeechhhhcceEEEEECCCCEEEEecCC
Q 047535 326 PPPVEGVFCFA-MQPID-GDVGIFGNFAQSDLFIGYDFDSQMVSFKPTD 372 (376)
Q Consensus 326 ~~~~~~~~C~~-i~~~~-~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~ 372 (376)
....+...|+. ++..+ .+.||||++|||++|+|||++++|||||+++
T Consensus 275 ~~~~~~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 275 GPSGDGSTCLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp EECSSSSCEEESEEECTTCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred eccCCCCeEEEEEECCCCCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 76423468966 77654 5689999999999999999999999999863
No 27
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=1.9e-54 Score=422.58 Aligned_cols=316 Identities=20% Similarity=0.306 Sum_probs=252.2
Q ss_pred ccccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCC-CCCCCCCCCCCCCCCcccccCCCCcccCCCCCCCC
Q 047535 15 SNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQ-CYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVSC 93 (376)
Q Consensus 15 ~~~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~-c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~~c 93 (376)
++.+..+++|+++|.||||+| ++.|+|||||+++||++..|.. -.|..|+.|+|++|+||+..+
T Consensus 45 ~l~n~~~~~Y~~~i~IGTP~Q-~~~v~~DTGSs~lWV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~-------------- 109 (478)
T 1qdm_A 45 ALKNYMNAQYFGEIGVGTPPQ-KFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNG-------------- 109 (478)
T ss_dssp GGCCGGGCCEEEEEEETTTTE-EEEEEEETTCCCCEEEBTTCCSCGGGGGSCCBCGGGCTTCBCCC--------------
T ss_pred EeEeccCCEEEEEEEECCCCe-EEEEEEcCCCcceEEecCCCCCCccccCCCCCCcccCCCeeeCC--------------
Confidence 344446789999999999999 9999999999999999999862 234567899999999999877
Q ss_pred CCCCCCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeCCCC-CC-CCCcceEeecCCCCCh------HHHHH
Q 047535 94 SSQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTG-VF-NENEMGLVGLGRTRLS------LASQI 165 (376)
Q Consensus 94 ~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGL~~~~~s------~~~ql 165 (376)
+.|.+.|++|+. .|.+++|+|++++ ++++++.||+++...+ .| ...++||||||++..+ ++.+|
T Consensus 110 -----~~~~i~Yg~Gs~-~G~~~~Dtv~ig~--~~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~p~~~~l 181 (478)
T 1qdm_A 110 -----KPAAIQYGTGSI-AGYFSEDSVTVGD--LVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVWYKM 181 (478)
T ss_dssp -----CEEEEEETTEEE-EEEEEEEEEEETT--EEEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGGGCCCHHHHH
T ss_pred -----cEEEEEcCCCCe-EEEEEEEEEEECC--eEECCEEEEEEEecCCcccccccccceecccccccccCCCCcHHHHH
Confidence 789999999985 7999999999999 8899999999988654 34 5567999999997554 45667
Q ss_pred Hhh--cCCCeEEEecCCCCCCCCccceEEECCCCcccC-CCceeeeeecCCCCceEEEEEeeEEecCCCCceeeEeccCC
Q 047535 166 LSQ--LGANKFSYCLVPFHTDSSITSKMYFGNGSEVSG-GGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYNS 242 (376)
Q Consensus 166 ~~~--~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~-~~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~~~~~ 242 (376)
.++ +..++||+||.+... ....|.|+|||.|..++ +.+.|+|+.. ..+|.|.+++|+|++ +.+.+.
T Consensus 182 ~~qg~i~~~~FS~~L~~~~~-~~~~G~l~fGg~d~~~~~G~l~~~pv~~---~~~w~v~l~~i~v~g-----~~~~~~-- 250 (478)
T 1qdm_A 182 IEQGLVSDPVFSFWLNRHVD-EGEGGEIIFGGMDPKHYVGEHTYVPVTQ---KGYWQFDMGDVLVGG-----KSTGFC-- 250 (478)
T ss_dssp TTTTCCSSSEEEEECCCC------CEEEEETCCCTTSEEEEEEEEEEEE---ETTEEEEECCEEETT-----EECSTT--
T ss_pred HHCCCCCCCEEEEEeecCCC-CCCCeEEEeCCcCHhhcCCCceEEeccC---CCeEEEEEeEEEECC-----EEEeec--
Confidence 665 667899999986421 23579999999776554 3499999987 569999999999999 766542
Q ss_pred CCccCCCceEEecCCCCccccHHHHHHHHHHHHHHh----------------------------------cCCC------
Q 047535 243 SGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAI----------------------------------KLTP------ 282 (376)
Q Consensus 243 ~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~----------------------------------~~~~------ 282 (376)
.....++|||||+++++|++++++|.++|.+.. .+..
T Consensus 251 ---~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~ 327 (478)
T 1qdm_A 251 ---AGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRG 327 (478)
T ss_dssp ---TTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC-------
T ss_pred ---CCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCcccc
Confidence 235689999999999999999999998885421 0000
Q ss_pred ----------------------------------------------------------C-CCCCCCccceeecCCCCCCC
Q 047535 283 ----------------------------------------------------------Y-QDPRLGSQLCYKTPSMAGIA 303 (376)
Q Consensus 283 ----------------------------------------------------------~-~~~~~~~~~C~~~~~~~~~~ 303 (376)
. .....+.++|...+ .+
T Consensus 328 ~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~~----~l 403 (478)
T 1qdm_A 328 VSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLG----SM 403 (478)
T ss_dssp --------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGGT----TC
T ss_pred ccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeeccccc----cc
Confidence 0 01234556776555 89
Q ss_pred CeEEEEecCCceEEECCCceEEecCCC-CeEEEE-EEccC-----CCceeechhhhcceEEEEECCCCEEEEecCC
Q 047535 304 PILTAHFDGGAKVPLIHTSTFIPPPVE-GVFCFA-MQPID-----GDVGIFGNFAQSDLFIGYDFDSQMVSFKPTD 372 (376)
Q Consensus 304 P~i~f~~~g~~~~~i~~~~y~~~~~~~-~~~C~~-i~~~~-----~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~ 372 (376)
|+|+|.|+| ..|+|+|++|+++...+ ...|+. |+..+ .+.||||++|||++|+|||++++|||||++.
T Consensus 404 P~i~f~~gg-~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a~ 478 (478)
T 1qdm_A 404 PDIEFTIGG-KKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 478 (478)
T ss_dssp CCEEEEETT-EEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ccEEEEECC-EEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeCC
Confidence 999999988 99999999999987522 357965 66432 4689999999999999999999999999863
No 28
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=2.1e-53 Score=406.94 Aligned_cols=324 Identities=17% Similarity=0.285 Sum_probs=250.1
Q ss_pred ccccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccCCCCCCCCC
Q 047535 15 SNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVSCS 94 (376)
Q Consensus 15 ~~~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~~c~ 94 (376)
.+....+..|+++|.||||+| ++.|+|||||+++||++..|..| ++.|+|++|+||+...
T Consensus 6 ~l~~~~~~~Y~~~i~iGTP~q-~~~v~~DTGSs~lWv~~~~c~~~----~~~f~~~~SsT~~~~~--------------- 65 (383)
T 2ewy_A 6 NLQGDSGRGYYLEMLIGTPPQ-KLQILVDTGSSNFAVAGTPHSYI----DTYFDTERSSTYRSKG--------------- 65 (383)
T ss_dssp CEEEETTTEEEEEEEETTTTE-EEEEEEETTCCCEEEECSCBTTB----SCCCCGGGCTTCEEEE---------------
T ss_pred eccCCCCCcEEEEEEecCCCc-eEEEEEecCCCceEEecCCCCcc----ccCcccccCccceeCC---------------
Confidence 334445678999999999999 99999999999999999988665 5689999999999988
Q ss_pred CCCCCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcc-cEEEeeeeCCCCCC--CCCcceEeecCCCCC--------hHHH
Q 047535 95 SQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFD-NVVFGCGHNNTGVF--NENEMGLVGLGRTRL--------SLAS 163 (376)
Q Consensus 95 ~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~-~~~fg~~~~~~~~~--~~~~~GilGL~~~~~--------s~~~ 163 (376)
|.|.+.|++|+. .|.+++|+|++++.. ... .+.|+++....+.| ...++||||||+... +++.
T Consensus 66 ----~~~~i~Yg~Gs~-~G~~~~Dtv~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~ 139 (383)
T 2ewy_A 66 ----FDVTVKYTQGSW-TGFVGEDLVTIPKGF-NTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFD 139 (383)
T ss_dssp ----EEEEEECSSCEE-EEEEEEEEEEETTTE-EEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHH
T ss_pred ----ceEEEEECCcEE-EEEEEEEEEEECCCc-cceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHH
Confidence 689999999997 799999999998631 111 35678776554444 346799999998643 3566
Q ss_pred HHHhhcC-CCeEEEecCCC----CCCCCccceEEECCCCcccC-CCceeeeeecCCCCceEEEEEeeEEecCCCCceeeE
Q 047535 164 QILSQLG-ANKFSYCLVPF----HTDSSITSKMYFGNGSEVSG-GGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLI 237 (376)
Q Consensus 164 ql~~~~~-~~~fs~~l~~~----~~~~~~~G~l~~Gg~~~~~~-~~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~ 237 (376)
+|.++.. .++||+||... .......|.|+|||.|..++ +.+.|+|+.. ..+|.|.+++|+|++ +.+
T Consensus 140 ~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~v~l~~i~v~g-----~~~ 211 (383)
T 2ewy_A 140 SLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKE---EWYYQIEILKLEIGG-----QSL 211 (383)
T ss_dssp HHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSS---BTTBBCCEEEEEETT-----EEC
T ss_pred HHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCC---CceEEEEEEEEEECC-----EEc
Confidence 7776622 57999999642 11224579999999876554 4599999987 568999999999999 877
Q ss_pred eccCCCCccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCC--CCCccceeecCCC-CCCCCeEEEEecCC-
Q 047535 238 PYYNSSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDP--RLGSQLCYKTPSM-AGIAPILTAHFDGG- 313 (376)
Q Consensus 238 ~~~~~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~--~~~~~~C~~~~~~-~~~~P~i~f~~~g~- 313 (376)
.++.+.+ ....++|||||++++||++++++|.++|.+.......... ..+.++|+..... +..+|.|+|.|+++
T Consensus 212 ~~~~~~~--~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~ 289 (383)
T 2ewy_A 212 NLDCREY--NADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDEN 289 (383)
T ss_dssp CCCTTTT--TSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEECSS
T ss_pred ccccccc--CCccEEEEcCCccccCCHHHHHHHHHHHhhhcccccCccccccccccccccCCcccHhhCCcEEEEECCCC
Confidence 6543211 2458999999999999999999999999876542211110 1346789875432 22689999999984
Q ss_pred ----ceEEECCCceEEecCC--CCeEEEE--EEccCCCceeechhhhcceEEEEECCCCEEEEecCCCCC
Q 047535 314 ----AKVPLIHTSTFIPPPV--EGVFCFA--MQPIDGDVGIFGNFAQSDLFIGYDFDSQMVSFKPTDCTK 375 (376)
Q Consensus 314 ----~~~~i~~~~y~~~~~~--~~~~C~~--i~~~~~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~c~~ 375 (376)
..++|+|++|+.+... .+..|++ +... .+.||||++|||++|+|||++++|||||+++|..
T Consensus 290 ~~~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 358 (383)
T 2ewy_A 290 SSRSFRITILPQLYIQPMMGAGLNYECYRFGISPS-TNALVIGATVMEGFYVIFDRAQKRVGFAASPCAE 358 (383)
T ss_dssp TTEEEEEEECHHHHEEEECCCTTCSEEEEESEEEE-SSCEEECHHHHTTEEEEEETTTTEEEEEECTTCB
T ss_pred CCceEEEEEChHHheeecccCCCCceeEEEEecCC-CCcEEEChHHhCCeeEEEECCCCeEEEEeccCCC
Confidence 2799999999987631 2467864 4443 4679999999999999999999999999999964
No 29
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=2.9e-53 Score=408.44 Aligned_cols=317 Identities=17% Similarity=0.293 Sum_probs=249.3
Q ss_pred CceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccCCCCCCCCCCCCCCe
Q 047535 21 NGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVSCSSQQLCN 100 (376)
Q Consensus 21 ~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~ 100 (376)
+..|+++|.||||+| +++|+|||||+++||++..| |..++.|+|++|+||+... |.
T Consensus 27 ~~~Y~~~i~iGTP~q-~~~v~~DTGSs~lWv~~~~c----~~~~~~y~~~~SsT~~~~~-------------------~~ 82 (402)
T 3vf3_A 27 GQGYYVEMTVGSPPQ-TLNILVDTGSSNFAVGAAPH----PFLHRYYQRQLSSTYRDLR-------------------KG 82 (402)
T ss_dssp TTEEEEEEEETTTTE-EEEEEEETTCCCEEEECSCC----TTCSCCCCGGGCTTCEEEE-------------------EE
T ss_pred CCEEEEEEEECCCCe-EEEEEEeCCCCceEEccCCC----CcccCCcCcccCcccccCC-------------------CE
Confidence 358999999999999 99999999999999999977 3457799999999999988 79
Q ss_pred eeEEeCCCCeeeEEEEEEEEEecCCCCCccc-EEEeeeeCCCCCC--CCCcceEeecCCCC--------ChHHHHHHhh-
Q 047535 101 YTYGYADSSLTKGVLATERITFGNSNNFFDN-VVFGCGHNNTGVF--NENEMGLVGLGRTR--------LSLASQILSQ- 168 (376)
Q Consensus 101 ~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~-~~fg~~~~~~~~~--~~~~~GilGL~~~~--------~s~~~ql~~~- 168 (376)
|.+.|++|+. .|.+++|+|+|++. ..+.. +.|+++......+ ...++||||||+.. .+++.+|.++
T Consensus 83 ~~i~Yg~Gs~-~G~~~~D~v~ig~~-~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~ 160 (402)
T 3vf3_A 83 VYVPYTQGKW-EGELGTDLVSIPHG-PNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQT 160 (402)
T ss_dssp EEEECSSCEE-EEEEEEEEEECTTS-CSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHS
T ss_pred EEEEECcEEE-EEEEEEEEEEECCc-cccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHcc
Confidence 9999999997 89999999999842 33443 4477776655544 35689999999863 4577788876
Q ss_pred -cCCCeEEEecCCCC--CC-----CCccceEEECCCCcccCC-CceeeeeecCCCCceEEEEEeeEEecCCCCceeeEec
Q 047535 169 -LGANKFSYCLVPFH--TD-----SSITSKMYFGNGSEVSGG-GVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPY 239 (376)
Q Consensus 169 -~~~~~fs~~l~~~~--~~-----~~~~G~l~~Gg~~~~~~~-~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~~ 239 (376)
+. ++|++||.... ++ ....|.|+|||.|..++. .+.|+|+.. ..+|.|.+++|+|++ +.+.+
T Consensus 161 ~i~-~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~w~v~l~~i~v~g-----~~~~~ 231 (402)
T 3vf3_A 161 HVP-NLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR---EWYYEVIIVRVEING-----QDLKM 231 (402)
T ss_dssp CCC-SCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSS---BTTBEECEEEEEETT-----EECCC
T ss_pred CCc-cceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCc---CcEEEEEEeEEEECC-----EEecc
Confidence 44 79999997531 11 345799999998776554 499999987 668999999999999 77765
Q ss_pred cCCCCccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCC--CCCccceeecCCC-CCCCCeEEEEecCCc--
Q 047535 240 YNSSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDP--RLGSQLCYKTPSM-AGIAPILTAHFDGGA-- 314 (376)
Q Consensus 240 ~~~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~--~~~~~~C~~~~~~-~~~~P~i~f~~~g~~-- 314 (376)
+.+. .....++|||||++++||++++++|.++|.+........+. ..+.++|+..... +..+|.|+|+|++..
T Consensus 232 ~~~~--~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~ 309 (402)
T 3vf3_A 232 DCKE--YNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTN 309 (402)
T ss_dssp CGGG--GGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEEECSSTT
T ss_pred cccc--cCCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccccccccccchHhhCCceEEEEecCCCC
Confidence 3321 12468999999999999999999999999887542222211 2346899986532 226899999999843
Q ss_pred ---eEEECCCceEEecCCC---CeEEEE--EEccCCCceeechhhhcceEEEEECCCCEEEEecCCCCC
Q 047535 315 ---KVPLIHTSTFIPPPVE---GVFCFA--MQPIDGDVGIFGNFAQSDLFIGYDFDSQMVSFKPTDCTK 375 (376)
Q Consensus 315 ---~~~i~~~~y~~~~~~~---~~~C~~--i~~~~~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~c~~ 375 (376)
.++|+|++|+.+.... ...|++ +... .+.||||++|||++|+|||++++|||||+++|++
T Consensus 310 ~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 377 (402)
T 3vf3_A 310 QSFRITILPQQYLRPVEDVATSQDDCYKFAISQS-STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHV 377 (402)
T ss_dssp EEEEEEECHHHHEEECCCGGGTTEEEEEECEEEE-SSCEEECHHHHTTEEEEEEGGGTEEEEEEETTCC
T ss_pred ceEEEEECHHHheehhccCCCCCceEEEEeccCC-CCcEEEChHHhCCeEEEEECCCCEEEEEecccCc
Confidence 5999999999987521 148975 3332 5789999999999999999999999999999986
No 30
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=4.3e-53 Score=406.18 Aligned_cols=320 Identities=18% Similarity=0.299 Sum_probs=250.1
Q ss_pred ccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccCCCCCCCCCCCCC
Q 047535 19 TANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVSCSSQQL 98 (376)
Q Consensus 19 ~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~~c~~~~~ 98 (376)
..+.+|+++|.||||+| ++.|+|||||+++||++..|..| ++.|+|++|+||+...
T Consensus 18 ~~~~~Y~~~i~iGTP~Q-~~~v~~DTGSs~lWv~~~~c~~~----~~~y~~~~SsT~~~~~------------------- 73 (395)
T 2qp8_A 18 KSGQGYYVEMTVGSPPQ-TLNILVDTGSSNFAVGAAPHPFL----HRYYQRQLSSTYRDLR------------------- 73 (395)
T ss_dssp ETTTEEEEEEEETTTTE-EEEEEEETTCCCEEEECSCCTTC----SCCCCGGGCTTCEEEE-------------------
T ss_pred CCCceEEEEEEecCCCc-eEEEEEecCCCceEEECCCCccc----cCCcCcccCCCceeCC-------------------
Confidence 34678999999999999 99999999999999999988654 5789999999999988
Q ss_pred CeeeEEeCCCCeeeEEEEEEEEEecCCCCCcc-cEEEeeeeCCCCCC--CCCcceEeecCCCC--------ChHHHHHHh
Q 047535 99 CNYTYGYADSSLTKGVLATERITFGNSNNFFD-NVVFGCGHNNTGVF--NENEMGLVGLGRTR--------LSLASQILS 167 (376)
Q Consensus 99 ~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~-~~~fg~~~~~~~~~--~~~~~GilGL~~~~--------~s~~~ql~~ 167 (376)
|.|.+.|++|+. .|.+++|+|++++. ..++ .+.|+++......| ...++||||||+.. .+++.+|.+
T Consensus 74 ~~~~i~Yg~Gs~-~G~~~~Dtv~ig~g-~~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~ 151 (395)
T 2qp8_A 74 KGVYVPYTQGKW-EGELGTDLVSIPHG-PNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVK 151 (395)
T ss_dssp EEEEEECSSCEE-EEEEEEEEEECTTS-CSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHH
T ss_pred ceEEEEECCcEE-EEEEEeEEEEECCC-CCceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHHHHHH
Confidence 689999999998 79999999999831 3444 36677776554444 35689999999864 346678877
Q ss_pred hcC-CCeEEEecCCCCC--C-----CCccceEEECCCCcccC-CCceeeeeecCCCCceEEEEEeeEEecCCCCceeeEe
Q 047535 168 QLG-ANKFSYCLVPFHT--D-----SSITSKMYFGNGSEVSG-GGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIP 238 (376)
Q Consensus 168 ~~~-~~~fs~~l~~~~~--~-----~~~~G~l~~Gg~~~~~~-~~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~ 238 (376)
+.. .++||+||..... + ....|.|+|||.|..++ +.+.|+|+.. ..+|.|.+++|+|++ +.+.
T Consensus 152 q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~v~l~~i~v~g-----~~~~ 223 (395)
T 2qp8_A 152 QTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR---EWYYEVIIVRVEING-----QDLK 223 (395)
T ss_dssp HSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCS---BTTBBCCEEEEEETT-----EECC
T ss_pred ccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCC---CceEEEEEEEEEECC-----EEcc
Confidence 632 3799999975310 0 13579999999876554 3499999987 568999999999999 7776
Q ss_pred ccCCCCccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCC--CCCccceeecCCC-CCCCCeEEEEecCCc-
Q 047535 239 YYNSSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDP--RLGSQLCYKTPSM-AGIAPILTAHFDGGA- 314 (376)
Q Consensus 239 ~~~~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~--~~~~~~C~~~~~~-~~~~P~i~f~~~g~~- 314 (376)
++.+. -....++|||||++++||++++++|.++|.+.......... ..+.++|+..... +..+|.|+|+|+++.
T Consensus 224 ~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~ 301 (395)
T 2qp8_A 224 MDCKE--YNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVT 301 (395)
T ss_dssp CCGGG--GGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSST
T ss_pred cCccc--cCCceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccccccccccccccccchHhhCCcEEEEEccCCC
Confidence 53321 12357999999999999999999999999876542211100 1235789876532 226999999999843
Q ss_pred ----eEEECCCceEEecCC---CCeEEE--EEEccCCCceeechhhhcceEEEEECCCCEEEEecCCCCC
Q 047535 315 ----KVPLIHTSTFIPPPV---EGVFCF--AMQPIDGDVGIFGNFAQSDLFIGYDFDSQMVSFKPTDCTK 375 (376)
Q Consensus 315 ----~~~i~~~~y~~~~~~---~~~~C~--~i~~~~~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~c~~ 375 (376)
+++|+|++|+.+... +...|+ ++... ...||||++|||++|+|||++++|||||+++|.+
T Consensus 302 ~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 370 (395)
T 2qp8_A 302 NQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS-STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHV 370 (395)
T ss_dssp TEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEE-SSCEEECHHHHTTEEEEEETTTTEEEEEEETTCC
T ss_pred CceEEEEECHHHhEeecccCCCCCceEEEEEecCC-CCcEEEChHHhCCeeEEEECCCCEEEEEeccCCC
Confidence 699999999988642 234785 56543 4689999999999999999999999999999985
No 31
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=8.7e-53 Score=410.84 Aligned_cols=320 Identities=17% Similarity=0.285 Sum_probs=253.1
Q ss_pred cCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccCCCCCCCCCCCCCC
Q 047535 20 ANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVSCSSQQLC 99 (376)
Q Consensus 20 ~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~ 99 (376)
.+..|+++|.||||+| +++|+|||||+++||++..| |..++.|+|++|+||+... |
T Consensus 72 ~~~~Y~~~i~iGTP~Q-~~~v~~DTGSs~lWV~~~~c----c~~~~~y~~~~SsT~~~~~-------------------~ 127 (455)
T 3lpj_A 72 SGQGYYVEMTVGSPPQ-TLNILVDTGSSNFAVGAAPH----PFLHRYYQRQLSSTYRDLR-------------------K 127 (455)
T ss_dssp TTTEEEEEEEETTTTE-EEEEEEETTCCCEEEECSCC----TTCSCCCCGGGCTTCEEEE-------------------E
T ss_pred CCCEEEEEEEECCCCe-EEEEEEcCCCcceEEecccc----cccCCcccCCCCCCcccCC-------------------c
Confidence 3458999999999999 99999999999999999977 3467899999999999988 7
Q ss_pred eeeEEeCCCCeeeEEEEEEEEEecCCCCCcc-cEEEeeeeCCCCCC--CCCcceEeecCCCC--------ChHHHHHHhh
Q 047535 100 NYTYGYADSSLTKGVLATERITFGNSNNFFD-NVVFGCGHNNTGVF--NENEMGLVGLGRTR--------LSLASQILSQ 168 (376)
Q Consensus 100 ~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~-~~~fg~~~~~~~~~--~~~~~GilGL~~~~--------~s~~~ql~~~ 168 (376)
.|.+.|++|+. .|.+++|+|+|++. ..+. .+.|+++......| ...++||||||+.. .+++.+|.++
T Consensus 128 ~~~i~Yg~Gs~-~G~~~~Dtv~ig~~-~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q 205 (455)
T 3lpj_A 128 GVYVPYTQGKW-EGELGTDLVSIPHG-PNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQ 205 (455)
T ss_dssp EEEEECSSCEE-EEEEEEEEEECTTS-CSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHH
T ss_pred cEEEEeCCeEE-EEEEEEEEEEECCC-cceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHc
Confidence 99999999998 89999999999852 2233 36788887766544 35689999999863 4577788876
Q ss_pred --cCCCeEEEecCCCCCC-------CCccceEEECCCCcccCC-CceeeeeecCCCCceEEEEEeeEEecCCCCceeeEe
Q 047535 169 --LGANKFSYCLVPFHTD-------SSITSKMYFGNGSEVSGG-GVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIP 238 (376)
Q Consensus 169 --~~~~~fs~~l~~~~~~-------~~~~G~l~~Gg~~~~~~~-~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~ 238 (376)
+. ++|++||...... ....|.|+|||+|..++. .+.|+|+.. ..+|.|.+++|+|++ +.+.
T Consensus 206 ~~i~-~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~w~v~l~~i~v~g-----~~~~ 276 (455)
T 3lpj_A 206 THVP-NLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR---EWYYEVIIVRVEING-----QDLK 276 (455)
T ss_dssp SCCC-SCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCS---BTTBBCCEEEEEETT-----EECC
T ss_pred cCCC-ceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCC---CceeEEEEeEEEECC-----EEcc
Confidence 44 7999999753111 235799999998776553 499999987 669999999999999 7776
Q ss_pred ccCCCCccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCC--CCCCccceeecCCC-CCCCCeEEEEecCCc-
Q 047535 239 YYNSSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQD--PRLGSQLCYKTPSM-AGIAPILTAHFDGGA- 314 (376)
Q Consensus 239 ~~~~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~--~~~~~~~C~~~~~~-~~~~P~i~f~~~g~~- 314 (376)
+..+. .....++|||||++++||++++++|+++|.+........+ ...+.++|+..... +..+|.|+|+|++..
T Consensus 277 ~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~~ 354 (455)
T 3lpj_A 277 MDCKE--YNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVT 354 (455)
T ss_dssp CCGGG--GGSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSST
T ss_pred ccccc--cCCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceecccccCCchhcCCcEEEEEcCCCc
Confidence 54321 1246899999999999999999999999988754222211 12346899986632 225999999999843
Q ss_pred ----eEEECCCceEEecCCC---CeEEEEEEc-cCCCceeechhhhcceEEEEECCCCEEEEecCCCCCC
Q 047535 315 ----KVPLIHTSTFIPPPVE---GVFCFAMQP-IDGDVGIFGNFAQSDLFIGYDFDSQMVSFKPTDCTKQ 376 (376)
Q Consensus 315 ----~~~i~~~~y~~~~~~~---~~~C~~i~~-~~~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~c~~~ 376 (376)
+|+|+|++|+.+.... ...|+++.. ...+.||||++|||++|+|||++++|||||+++|+.+
T Consensus 355 ~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~ 424 (455)
T 3lpj_A 355 NQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVH 424 (455)
T ss_dssp TEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCC
T ss_pred CceEEEEECHHHheEeccCCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEEECCCCEEEEEecccccc
Confidence 5999999999986532 258976322 1257899999999999999999999999999999763
No 32
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=8e-52 Score=395.28 Aligned_cols=328 Identities=23% Similarity=0.422 Sum_probs=250.8
Q ss_pred eecccc--ccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccCCC--
Q 047535 13 VQSNVS--TANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLL-- 88 (376)
Q Consensus 13 ~~~~~~--~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~-- 88 (376)
+.+|+. ..+.+|+++|.|||| |+|||||+++||+|..|. +|+...|.+..|...
T Consensus 3 ~~~pv~~~~~~~~Y~~~i~iGtP------v~~DTGSs~lWv~c~~~~----------------~~~~~~C~s~~C~~~~~ 60 (381)
T 1t6e_X 3 VLAPVTKDPATSLYTIPFHDGAS------LVLDVAGPLVWSTCDGGQ----------------PPAEIPCSSPTCLLANA 60 (381)
T ss_dssp EEEEEEECTTTCCEEEEEETTEE------EEEETTCCCEEECCCTTC----------------CCCCCBTTSHHHHHHHS
T ss_pred eEEeEEecCCCcEEEEEEeCCCE------EEEECCCCceEEeCCCCC----------------CCCccCCCCchhccccC
Confidence 344554 567899999999995 999999999999987541 244556666666432
Q ss_pred -CCCCCCC--------CCCC-eeeEEeCCCCeeeEEEEEEEEEecCC--CCCcccE----EEeeeeCCC-CCCCCCcceE
Q 047535 89 -DTVSCSS--------QQLC-NYTYGYADSSLTKGVLATERITFGNS--NNFFDNV----VFGCGHNNT-GVFNENEMGL 151 (376)
Q Consensus 89 -~~~~c~~--------~~~~-~~~~~Y~~g~~~~G~~~~D~v~i~~~--~~~~~~~----~fg~~~~~~-~~~~~~~~Gi 151 (376)
....|.. +..| .|.+.|++|+.+.|.+++|+|++++. ...++++ .|||++... ..+...++||
T Consensus 61 ~~~~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~~~~~dGI 140 (381)
T 1t6e_X 61 YPAPGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASLPRGSTGV 140 (381)
T ss_dssp SCCTTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTSCTTEEEE
T ss_pred CCCCCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCCCCCCceE
Confidence 1224542 2456 59999999998789999999999841 1456665 569998763 2234578999
Q ss_pred eecCCCCChHHHHHHhh-cCCCeEEEecCCCCCCCCccceEEECCCCcc---cCCCceeeeeecCCCCceEEEEEeeEEe
Q 047535 152 VGLGRTRLSLASQILSQ-LGANKFSYCLVPFHTDSSITSKMYFGNGSEV---SGGGVVSTSLVSKEDKTYYFVTLEGISV 227 (376)
Q Consensus 152 lGL~~~~~s~~~ql~~~-~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~---~~~~~~~~p~~~~~~~~~w~v~~~~i~v 227 (376)
||||+...+++.|+..+ +..++|++||... ..|.|+|||.+.. ..+.+.|+|++..+...+|.|.+++|+|
T Consensus 141 lGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~-----~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~v 215 (381)
T 1t6e_X 141 AGLANSGLALPAQVASAQKVANRFLLCLPTG-----GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVV 215 (381)
T ss_dssp EECSSSTTSHHHHHHHHHTCCSEEEEECCSS-----SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEE
T ss_pred EEeCCCcchhHHHHhhhcccCceEEEEeCCC-----CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEE
Confidence 99999999999999876 4568999999753 4699999997643 2356999999975433457799999999
Q ss_pred cCCCCceeeEeccCCCCccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcC--------CCCCCCCCCccceeecCCC
Q 047535 228 GNLSNSSKLIPYYNSSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKL--------TPYQDPRLGSQLCYKTPSM 299 (376)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~--------~~~~~~~~~~~~C~~~~~~ 299 (376)
++ +.+.++.+.+ ....+||||||++++||+++|++|.++|.+.+.. .+.......+..|+..+..
T Consensus 216 g~-----~~~~~~~~~~--~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~ 288 (381)
T 1t6e_X 216 GD-----TRVPVPEGAL--ATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTL 288 (381)
T ss_dssp TT-----EECCCCTTCS--CTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGC
T ss_pred cC-----EEecCCHHHc--cCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCC
Confidence 99 8776654321 1457999999999999999999999999887631 1110123456789976532
Q ss_pred C-----CCCCeEEEEecCCceEEECCCceEEecCCCCeEEEEEEccCC--------CceeechhhhcceEEEEECCCCEE
Q 047535 300 A-----GIAPILTAHFDGGAKVPLIHTSTFIPPPVEGVFCFAMQPIDG--------DVGIFGNFAQSDLFIGYDFDSQMV 366 (376)
Q Consensus 300 ~-----~~~P~i~f~~~g~~~~~i~~~~y~~~~~~~~~~C~~i~~~~~--------~~~ilG~~fl~~~y~vFD~~~~rI 366 (376)
. ..+|+|+|+|+|+..++|++++|+++.. .+..|++++.... +.||||+.|||++|+|||++++||
T Consensus 289 ~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~-~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~ri 367 (381)
T 1t6e_X 289 GNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVK-QGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRL 367 (381)
T ss_dssp CEETTEECCCCEEEEETTSCEEEECHHHHEEEEE-TTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEE
T ss_pred cccccCCcCCeEEEEECCCcEEEeCCCeEEEEcC-CCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEE
Confidence 1 1689999999866999999999998865 5689999887543 589999999999999999999999
Q ss_pred EEec----CCCCC
Q 047535 367 SFKP----TDCTK 375 (376)
Q Consensus 367 Gfa~----~~c~~ 375 (376)
|||+ ++|++
T Consensus 368 GfA~~~~~~~cs~ 380 (381)
T 1t6e_X 368 GFSRLPHFTGCGG 380 (381)
T ss_dssp EEEECCTTCCSCC
T ss_pred EEecccCCCCCCC
Confidence 9998 56765
No 33
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=4e-52 Score=391.76 Aligned_cols=302 Identities=20% Similarity=0.306 Sum_probs=241.4
Q ss_pred ccccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccCCCCCCCCC
Q 047535 15 SNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVSCS 94 (376)
Q Consensus 15 ~~~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~~c~ 94 (376)
.++...+..|+++|.||||+| ++.|+|||||+++||++. +.|+|++|+++. .
T Consensus 5 ~~l~n~~~~Y~~~i~iGTP~q-~~~v~~DTGSs~lWv~~~----------~~y~~s~Ss~~~--~--------------- 56 (340)
T 1wkr_A 5 VPATNQLVDYVVNVGVGSPAT-TYSLLVDTGSSNTWLGAD----------KSYVKTSTSSAT--S--------------- 56 (340)
T ss_dssp EEEEECSSCEEEEEEETTTTE-EEEEEEETTCCCCEECSS----------SCCCCCTTCEEE--E---------------
T ss_pred EeeeccCcEEEEEEEECCCCc-EEEEEEeCCChhheecCC----------CccCCcCCcccc--C---------------
Confidence 445555789999999999999 999999999999999864 379998887653 3
Q ss_pred CCCCCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeCCCCCCCCCcceEeecCCCCC--------------h
Q 047535 95 SQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTGVFNENEMGLVGLGRTRL--------------S 160 (376)
Q Consensus 95 ~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGL~~~~~--------------s 160 (376)
|.|.+.|++|++ .|.+++|+|++++ ++++++.|||++...+ |. .++||||||+... +
T Consensus 57 ----~~~~i~Yg~Gs~-~G~~~~Dtv~~g~--~~v~~~~fg~~~~~~~-~~-~~~GilGLg~~~~s~~~~~~~~~~~~~~ 127 (340)
T 1wkr_A 57 ----DKVSVTYGSGSF-SGTEYTDTVTLGS--LTIPKQSIGVASRDSG-FD-GVDGILGVGPVDLTVGTLSPHTSTSIPT 127 (340)
T ss_dssp ----EEEEEECSSCEE-EEEEEEEEEEETT--EEEEEEEEEEEEEEES-CT-TCSEEEECSCGGGGTTSEESCTTCCCCC
T ss_pred ----ceEEEEECCcEE-EEEEEEEEEEECC--EEEcceEEEEEEccCC-Cc-CCCcEEECCccccccccccccccccCCC
Confidence 689999999985 7999999999999 8899999999998654 32 5899999998653 4
Q ss_pred HHHHHHhh--cCCCeEEEecCCCCCCCCccceEEECCCCcccC-CCceeeeeecCCC-CceEEEEEeeEEecCCCCceee
Q 047535 161 LASQILSQ--LGANKFSYCLVPFHTDSSITSKMYFGNGSEVSG-GGVVSTSLVSKED-KTYYFVTLEGISVGNLSNSSKL 236 (376)
Q Consensus 161 ~~~ql~~~--~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~-~~~~~~p~~~~~~-~~~w~v~~~~i~v~~~~~~~~~ 236 (376)
++.+|.++ +..++|++||.+...+....|.|+|||.|..+. +.+.|+|+..... ..+|.|. .+|+|++. +.
T Consensus 128 ~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~----~~ 202 (340)
T 1wkr_A 128 VTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSS----TS 202 (340)
T ss_dssp HHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTT----EE
T ss_pred HHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCC----eE
Confidence 56677765 667899999986432234679999999876554 4599999988533 4689999 99999861 33
Q ss_pred EeccCCCCccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCCCCccceeecCCCCCCCCeEEEEecCCceE
Q 047535 237 IPYYNSSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKV 316 (376)
Q Consensus 237 ~~~~~~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~~~g~~~~ 316 (376)
+.. ...++|||||++++||++++++|.+++.+.+. .....+.++|.... .+|.|+|.|+| ..+
T Consensus 203 l~~--------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~----~~~g~~~~~C~~~~----~~p~i~f~f~g-~~~ 265 (340)
T 1wkr_A 203 ILS--------STAGIVDTGTTLTLIASDAFAKYKKATGAVAD----NNTGLLRLTTAQYA----NLQSLFFTIGG-QTF 265 (340)
T ss_dssp EEE--------EEEEEECTTBCSEEECHHHHHHHHHHHTCEEC----TTTSSEEECHHHHH----TCCCEEEEETT-EEE
T ss_pred ccC--------CCeEEEeCCcccccCCHHHHHHHHHhhCCEEc----CCCCeEEeeccccc----cCCcEEEEECC-EEE
Confidence 431 24799999999999999999999888765432 12334667888654 78999999998 999
Q ss_pred EECCCceEEecCC-------CCeEEEEEEccC-----CCceeechhhhcceEEEEECCCCEEEEecCCCCC
Q 047535 317 PLIHTSTFIPPPV-------EGVFCFAMQPID-----GDVGIFGNFAQSDLFIGYDFDSQMVSFKPTDCTK 375 (376)
Q Consensus 317 ~i~~~~y~~~~~~-------~~~~C~~i~~~~-----~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~c~~ 375 (376)
+|+|++|+++... .+.||+++.... +..||||++|||++|+|||++++|||||+++|++
T Consensus 266 ~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 336 (340)
T 1wkr_A 266 ELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTT 336 (340)
T ss_dssp EECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTT
T ss_pred EEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCC
Confidence 9999999976531 134445666421 3469999999999999999999999999999975
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=7.8e-42 Score=305.37 Aligned_cols=226 Identities=21% Similarity=0.348 Sum_probs=188.4
Q ss_pred eccccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCC-CCCCCCCCCCCCCCcccccCCCCcccCCCCCCC
Q 047535 14 QSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQC-YKQVKPIYNPASSSSYKELSCQSEQCHLLDTVS 92 (376)
Q Consensus 14 ~~~~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c-~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~~ 92 (376)
+++.+..+.+|+++|.||||+| ++.|+|||||+++||++..|..+ .|..++.|+|++|+||+...
T Consensus 5 ~~l~n~~~~~Y~~~i~iGtP~q-~~~v~~DTGSs~lWv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~------------- 70 (239)
T 1b5f_A 5 VALTNDRDTSYFGEIGIGTPPQ-KFTVIFDTGSSVLWVPSSKCINSKACRAHSMYESSDSSTYKENG------------- 70 (239)
T ss_dssp EEEEEETTTEEEEEEEETTTTE-EEEEEEETTCCCEEEEBTTCCSCHHHHTSCCBCGGGCTTCEEEE-------------
T ss_pred eeeeecCCCEEEEEEEECCCCe-EEEEEEeCCCcceEEEcCCCCCCcccCCCCCCCCccCCCeeeCC-------------
Confidence 4455667899999999999999 99999999999999999998732 34567899999999999877
Q ss_pred CCCCCCCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeCCCC-CC-CCCcceEeecCCCCCh--HHHHHHhh
Q 047535 93 CSSQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTG-VF-NENEMGLVGLGRTRLS--LASQILSQ 168 (376)
Q Consensus 93 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGL~~~~~s--~~~ql~~~ 168 (376)
|.+.+.|++|+. .|.++.|+|++++ .+++++.||++..... .| ...++||||||+...+ ++.+|.++
T Consensus 71 ------~~~~i~Yg~Gs~-~G~~~~D~v~~g~--~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p~~~~l~~q 141 (239)
T 1b5f_A 71 ------TFGAIIYGTGSI-TGFFSQDSVTIGD--LVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVWYNMLNQ 141 (239)
T ss_dssp ------EEEEEECSSCEE-EEEEEEEEEEETT--EEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCCHHHHHHHT
T ss_pred ------cEEEEEECCCcE-EEEEEEEEEEECC--cEEccEEEEEEEeccCccccccCcceEEecCccccccHHHHHHHHC
Confidence 689999999986 7999999999999 8899999999987654 23 4568999999998765 44566665
Q ss_pred --cCCCeEEEecCCCCCCCCccceEEECCCCcccCC-CceeeeeecCCCCceEEEEEeeEEecCCCCceeeEeccCCCCc
Q 047535 169 --LGANKFSYCLVPFHTDSSITSKMYFGNGSEVSGG-GVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYNSSGA 245 (376)
Q Consensus 169 --~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~~-~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~~~~~~~~ 245 (376)
+..++|++||.+.. +....|.|+|||.|..+.. .+.|+|+.. ..+|.|.+++|+|++ +.+.+.
T Consensus 142 g~i~~~~FS~~l~~~~-~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~v~l~~i~v~~-----~~~~~~----- 207 (239)
T 1b5f_A 142 GLVKERRFSFWLNRNV-DEEEGGELVFGGLDPNHFRGDHTYVPVTY---QYYWQFGIGDVLIGD-----KSTGFC----- 207 (239)
T ss_dssp TCCSSSEEEEEECCSC-SSSCCEEEEETSCCGGGEEEEEEEEEEEE---ETTEEEEECCEEETT-----EECCTT-----
T ss_pred CCCCCCEEEEEEeCCC-CCCCCeEEEECCcChhhccCceEEEEccc---CCeEEEEeeEEEECC-----EEeccc-----
Confidence 66789999998642 1235799999998765543 499999987 569999999999999 766543
Q ss_pred cCCCceEEecCCCCccccHHHHHHHHHHHHH
Q 047535 246 ISKGNMFIDTGAPPTLLPKDFYNRLEEQVRN 276 (376)
Q Consensus 246 ~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~ 276 (376)
.....++|||||++++||++++++|.++|++
T Consensus 208 ~~~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 208 APGCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp TTCEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred CCCCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 2346899999999999999999999998753
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=4.9e-37 Score=275.05 Aligned_cols=221 Identities=19% Similarity=0.289 Sum_probs=178.7
Q ss_pred CCcccEEEeeeeCCCC-CC-CCCcceEeecCCCCC------hHHHHHHhh--cCCCeEEEecCCCCCCCCccceEEECCC
Q 047535 127 NFFDNVVFGCGHNNTG-VF-NENEMGLVGLGRTRL------SLASQILSQ--LGANKFSYCLVPFHTDSSITSKMYFGNG 196 (376)
Q Consensus 127 ~~~~~~~fg~~~~~~~-~~-~~~~~GilGL~~~~~------s~~~ql~~~--~~~~~fs~~l~~~~~~~~~~G~l~~Gg~ 196 (376)
++++++.|||++...+ .| ...++||||||++.. +++.+|.++ +..++||+||.+.... ...|.|+|||.
T Consensus 3 ~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~-~~~G~l~fGg~ 81 (241)
T 1lya_B 3 VKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDA-QPGGELMLGGT 81 (241)
T ss_dssp EEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTC-SSCEEEEETSC
T ss_pred eEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCC-CCCcEEEECCc
Confidence 6789999999998765 34 567899999999743 466788776 6779999999875321 23799999998
Q ss_pred CcccC-CCceeeeeecCCCCceEEEEEeeEEecCCCCceeeEeccCCCCccCCCceEEecCCCCccccHHHHHHHHHHHH
Q 047535 197 SEVSG-GGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYNSSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVR 275 (376)
Q Consensus 197 ~~~~~-~~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~ 275 (376)
|..++ +++.|+|+.. ..+|.|.+++|+|++ +.+.. .....++|||||+++++|++++++|.+++.
T Consensus 82 d~~~~~g~l~~~p~~~---~~~~~v~l~~i~v~~-----~~~~~------~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 147 (241)
T 1lya_B 82 DSKYYKGSLSYLNVTR---KAYWQVHLDQVEVAS-----GLTLC------KEGCEAIVDTGTSLMVGPVDEVRELQKAIG 147 (241)
T ss_dssp CGGGEEEEEEEEECSS---BTTBEEEEEEEEETT-----SCEES------TTCEEEEECTTCSSEEECHHHHHHHHHHHT
T ss_pred CHHHcCCceEEEECcc---ccEEEEEEeEEEECC-----eeEec------cCCCEEEEECCCccccCCHHHHHHHHHHhC
Confidence 76654 4499999986 669999999999999 65431 245689999999999999999999999986
Q ss_pred HHhcCCCCCCCCCCccceeecCCCCCCCCeEEEEecCCceEEECCCceEEecCC-CCeEEE-EEEccC-----CCceeec
Q 047535 276 NAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKVPLIHTSTFIPPPV-EGVFCF-AMQPID-----GDVGIFG 348 (376)
Q Consensus 276 ~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~~~g~~~~~i~~~~y~~~~~~-~~~~C~-~i~~~~-----~~~~ilG 348 (376)
+... ....+.++|+... .+|+|+|.|+| ..++|+|++|+++... ++..|+ +|+..+ .+.||||
T Consensus 148 ~~~~-----~~g~~~~~C~~~~----~~p~i~f~f~g-~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG 217 (241)
T 1lya_B 148 AVPL-----IQGEYMIPCEKVS----TLPAITLKLGG-KGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILG 217 (241)
T ss_dssp CEEE-----ETTEEEEEGGGGG----GSCCEEEEETT-EEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEEC
T ss_pred Ceec-----cCCcEEEECCCCc----cCCeEEEEECC-EEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEec
Confidence 5432 1334667898655 89999999987 9999999999988652 246896 587642 5689999
Q ss_pred hhhhcceEEEEECCCCEEEEecCC
Q 047535 349 NFAQSDLFIGYDFDSQMVSFKPTD 372 (376)
Q Consensus 349 ~~fl~~~y~vFD~~~~rIGfa~~~ 372 (376)
++|||++|+|||.+++|||||+++
T Consensus 218 ~~fl~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 218 DVFIGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp HHHHTTEEEEEETTTTEEEEEEEC
T ss_pred hHHhcceEEEEECCCCEEEEEEcC
Confidence 999999999999999999999864
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.88 E-value=5.2e-23 Score=155.98 Aligned_cols=90 Identities=26% Similarity=0.438 Sum_probs=79.4
Q ss_pred eccccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCC--CCCCCCCCCCCCCCCcccccCCCCcccCCCCCC
Q 047535 14 QSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQ--CYKQVKPIYNPASSSSYKELSCQSEQCHLLDTV 91 (376)
Q Consensus 14 ~~~~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~--c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~ 91 (376)
+++.+..+.+|+++|.||||+| ++.|+|||||+++||++..|.. ..|..++.|+|++|+||+...
T Consensus 5 ~~l~n~~~~~Y~~~i~iGTP~Q-~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~~~y~p~~SsT~~~~~------------ 71 (97)
T 1lya_A 5 EVLKNYMDAQYYGEIGIGTPPQ-CFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNG------------ 71 (97)
T ss_dssp EEEEEETTTEEEEEEEETTTTE-EEEEEEETTCCCEEEEBTTCCTTCHHHHTSCCBCGGGCTTCEEEE------------
T ss_pred EeeEECCCCeEEEEEEECCCCe-EEEEEEeCCCCceEEeEcCccCcccccCCCCCCCchhCCCceeCC------------
Confidence 3444568899999999999999 9999999999999999999973 234457899999999999987
Q ss_pred CCCCCCCCeeeEEeCCCCeeeEEEEEEEEEecC
Q 047535 92 SCSSQQLCNYTYGYADSSLTKGVLATERITFGN 124 (376)
Q Consensus 92 ~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~ 124 (376)
|.|.+.|++|++ .|.++.|+|+|++
T Consensus 72 -------~~~~i~Yg~Gs~-~G~~~~Dtv~i~g 96 (97)
T 1lya_A 72 -------TSFDIHYGSGSL-SGYLSQDTVSVPC 96 (97)
T ss_dssp -------EEEEEECSSCEE-EEEEEEEEEEESC
T ss_pred -------CcEEEEECCcEE-EEEEEEEEEEECC
Confidence 799999999995 7999999999987
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.71 E-value=1e-17 Score=124.60 Aligned_cols=80 Identities=15% Similarity=0.233 Sum_probs=67.2
Q ss_pred CCccceeecCCCCCCCCeEEEEecCCceEEECCCceEEecCCC-CeEEE-EEEcc----CCCceeechhhhcceEEEEEC
Q 047535 288 LGSQLCYKTPSMAGIAPILTAHFDGGAKVPLIHTSTFIPPPVE-GVFCF-AMQPI----DGDVGIFGNFAQSDLFIGYDF 361 (376)
Q Consensus 288 ~~~~~C~~~~~~~~~~P~i~f~~~g~~~~~i~~~~y~~~~~~~-~~~C~-~i~~~----~~~~~ilG~~fl~~~y~vFD~ 361 (376)
.|.++|...+ .+|+|+|.|+| ..++|+|++|+.+.... ...|+ +++.. ..+.||||++|||++|+|||.
T Consensus 2 ~y~v~C~~~~----~~P~i~f~~gg-~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~ 76 (87)
T 1b5f_B 2 ELQVDCNTLS----SMPNVSFTIGG-KKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDY 76 (87)
T ss_dssp CCEECGGGGG----GCCCEEEEETT-EEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEET
T ss_pred cEEEECCCCC----cCCcEEEEECC-EEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEEC
Confidence 3667898765 89999999988 99999999999986422 36896 57764 246899999999999999999
Q ss_pred CCCEEEEecCC
Q 047535 362 DSQMVSFKPTD 372 (376)
Q Consensus 362 ~~~rIGfa~~~ 372 (376)
+++|||||+++
T Consensus 77 ~~~riGfA~~~ 87 (87)
T 1b5f_B 77 GNLLVGFAEAA 87 (87)
T ss_dssp TTTEEEEEEEC
T ss_pred CCCEEEEEEcC
Confidence 99999999864
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=94.54 E-value=0.094 Score=41.83 Aligned_cols=28 Identities=7% Similarity=-0.021 Sum_probs=25.4
Q ss_pred CceeechhhhcceEEEEECCCCEEEEec
Q 047535 343 DVGIFGNFAQSDLFIGYDFDSQMVSFKP 370 (376)
Q Consensus 343 ~~~ilG~~fl~~~y~vFD~~~~rIGfa~ 370 (376)
...|||..||+++-.+.|+.+++|-|..
T Consensus 108 ~d~iLG~d~L~~~~~~ID~~~~~l~l~~ 135 (148)
T 2i1a_A 108 IDVLIGLDMLKRHLACVDLKENVLRIAE 135 (148)
T ss_dssp CSEEECHHHHHHTTCEEETTTTEEEETT
T ss_pred CCeEecHHHHhhCCEEEECCCCEEEEcc
Confidence 4699999999999999999999998863
No 39
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=94.03 E-value=0.089 Score=42.08 Aligned_cols=36 Identities=8% Similarity=-0.037 Sum_probs=28.9
Q ss_pred EEEccCCCceeechhhhcceEEEEECCCCEEEEecC
Q 047535 336 AMQPIDGDVGIFGNFAQSDLFIGYDFDSQMVSFKPT 371 (376)
Q Consensus 336 ~i~~~~~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~ 371 (376)
.+........|||..||+++=.+.|+.+++|-|...
T Consensus 100 ~Vle~~~~d~LLGmD~L~~~~~~ID~~~~~L~l~~~ 135 (148)
T 3s8i_A 100 SILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGTT 135 (148)
T ss_dssp EEETTCSSSEEECHHHHHHTTCEEETTTTEEECTTT
T ss_pred EEeCCCCcCeeccHHHHHhCCEEEEcCCCEEEEccC
Confidence 344333456899999999999999999999988753
No 40
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=93.89 E-value=0.061 Score=42.95 Aligned_cols=32 Identities=16% Similarity=0.197 Sum_probs=27.5
Q ss_pred cCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCC
Q 047535 20 ANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCL 54 (376)
Q Consensus 20 ~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~ 54 (376)
..+.+++++.|+. + +++++||||++.+.+...
T Consensus 23 ~~~~~~v~v~InG--~-~~~~LvDTGAs~s~is~~ 54 (148)
T 2i1a_A 23 QVPMLYINIEINN--Y-PVKAFVDTGAQTTIMSTR 54 (148)
T ss_dssp CCCCCEEEEEETT--E-EEEEEECTTCSSCEEEHH
T ss_pred ccceEEEEEEECC--E-EEEEEEECCCCccccCHH
Confidence 4577999999986 7 999999999999988644
No 41
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=87.32 E-value=0.49 Score=37.72 Aligned_cols=46 Identities=9% Similarity=0.049 Sum_probs=27.7
Q ss_pred cCCCCcceeccccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCC
Q 047535 6 YFYPNNVVQSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCL 54 (376)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~ 54 (376)
|..+.+.+.|-..-...-|++++.|.. + +++++||||++.+.+...
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~v~~~Ing--~-~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 7 HHHHSSGLVPRGSGQVTMLYINCKVNG--H-PLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp ---------------CCCCEEEEEETT--E-EEEEEECTTCSSCEEEHH
T ss_pred cccccCCcCceeccccCEEEEEEEECC--E-EEEEEEeCCCCcEeeCHH
Confidence 333445555555556678999999986 7 999999999999999765
No 42
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=82.63 E-value=1.6 Score=31.94 Aligned_cols=28 Identities=21% Similarity=0.323 Sum_probs=24.1
Q ss_pred EEEEEeCCCCCceEEEEEeCCCCceeEeCCC
Q 047535 25 VMKFSIGTPPLLDIYGIVDTGSDLMWVQCLP 55 (376)
Q Consensus 25 ~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~ 55 (376)
.+.+.||. | .+.+++|||+.++.+...+
T Consensus 10 ~vtvkI~G--q-~~eaLLDTGAD~TVl~~~~ 37 (99)
T 2hs1_A 10 LVTIKIGG--Q-LKEALLDTGADDTIIEEMS 37 (99)
T ss_dssp EEEEEETT--E-EEEEEECTTCSSEEESCCS
T ss_pred EEEEEECC--E-EEEEEeccCCCcEEEeccc
Confidence 46788987 8 9999999999999998664
No 43
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=79.41 E-value=1.9 Score=31.91 Aligned_cols=26 Identities=19% Similarity=0.207 Sum_probs=23.0
Q ss_pred EEEEEeCCCCCceEEEEEeCCCCceeEeC
Q 047535 25 VMKFSIGTPPLLDIYGIVDTGSDLMWVQC 53 (376)
Q Consensus 25 ~~~i~iGtp~q~~~~l~~DTGSs~~wv~~ 53 (376)
.+.+.||. | .+.+++|||+.++.+..
T Consensus 10 ~v~v~I~G--q-~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 10 TTIVLIND--T-PLNVLLDTGADTSVLTT 35 (104)
T ss_dssp EEEEEETT--E-EEEEEECTTCSSCEEEH
T ss_pred EEEEEECC--E-EEEEEeccCCCcEEEcc
Confidence 56789997 8 99999999999999983
No 44
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=79.33 E-value=1.6 Score=32.71 Aligned_cols=32 Identities=25% Similarity=0.399 Sum_probs=25.9
Q ss_pred EEEEEeC---CCCCceEEEEEeCCCCceeEeCCCCC
Q 047535 25 VMKFSIG---TPPLLDIYGIVDTGSDLMWVQCLPCV 57 (376)
Q Consensus 25 ~~~i~iG---tp~q~~~~l~~DTGSs~~wv~~~~C~ 57 (376)
.+.|.|| +|+| .+..++|||..++.+...+++
T Consensus 12 lvtikI~~~~~~Gq-~~eaLLDTGADdTVl~~~~lP 46 (116)
T 3liy_A 12 VIKAQVDTQTSHPK-TIEALLDTGADMTVIPIALFS 46 (116)
T ss_dssp EEEEEEECSSSCCE-EEEEEECTTBSSCEEEGGGSC
T ss_pred eEEEEEccccCCCe-EeEEEeccCCCccEEecccCC
Confidence 3456666 7889 999999999999999977543
No 45
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=78.39 E-value=2.7 Score=30.77 Aligned_cols=28 Identities=25% Similarity=0.220 Sum_probs=24.0
Q ss_pred EEEEEeCCCCCceEEEEEeCCCCceeEeCCC
Q 047535 25 VMKFSIGTPPLLDIYGIVDTGSDLMWVQCLP 55 (376)
Q Consensus 25 ~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~ 55 (376)
++.+.||. | .+.+++|||..++.+...+
T Consensus 10 ~vti~I~G--q-~~e~LLDTGAD~TVl~~~~ 37 (99)
T 3ec0_A 10 VVTAYIEG--Q-PVEVLLDTGADDSIVAGIE 37 (99)
T ss_dssp EEEEEETT--E-EEEEEECTTCSSCEESSCC
T ss_pred eEEEEECC--E-EEEEEEecCCCceEEcCcc
Confidence 46789987 7 9999999999999997653
No 46
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=66.89 E-value=5.3 Score=30.14 Aligned_cols=24 Identities=21% Similarity=0.259 Sum_probs=21.8
Q ss_pred EEeCCCCCceEEEEEeCCCCceeEeCC
Q 047535 28 FSIGTPPLLDIYGIVDTGSDLMWVQCL 54 (376)
Q Consensus 28 i~iGtp~q~~~~l~~DTGSs~~wv~~~ 54 (376)
|.||. | .+.+++|||..++.+...
T Consensus 18 ikI~G--q-~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 18 IFVNG--Y-PIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EEETT--E-EEEEEECTTCSSCEEEGG
T ss_pred EEECC--E-EEEEEecCCCCcEEEccc
Confidence 99996 8 999999999999999865
No 47
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=65.59 E-value=6.1 Score=29.64 Aligned_cols=29 Identities=14% Similarity=0.290 Sum_probs=24.6
Q ss_pred EEEEEeCCCCCceEEEEEeCCCCceeEeCCCC
Q 047535 25 VMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPC 56 (376)
Q Consensus 25 ~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C 56 (376)
.+.+.||. | .+..++|||..++.+...+.
T Consensus 11 ~vti~I~G--q-~~eaLLDTGADdTVi~~~~l 39 (114)
T 3sqf_A 11 SLTLWLDD--K-MFTGLINTGADVTIIKLEDW 39 (114)
T ss_dssp EEEEEETT--E-EEEEEECTTCSSCEEEGGGS
T ss_pred eEEEEECC--E-EEEEEEccCCCceEEecccC
Confidence 45688887 8 99999999999999987643
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=62.13 E-value=9.7 Score=29.41 Aligned_cols=28 Identities=18% Similarity=0.173 Sum_probs=24.2
Q ss_pred EEEEEEeCCCCCceEEEEEeCCCCceeEeCC
Q 047535 24 YVMKFSIGTPPLLDIYGIVDTGSDLMWVQCL 54 (376)
Q Consensus 24 y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~ 54 (376)
=.+.+.|+. | .+.++||||.+.+.+...
T Consensus 23 P~v~i~I~G--~-~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 23 PRITLKVGG--Q-PVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp SEEEEEETT--E-EEEEEECTTCSSCEECSC
T ss_pred CEEEEEECC--E-EEEEEEeCCCCeEEEccc
Confidence 456788987 7 999999999999999865
No 49
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=52.83 E-value=14 Score=28.13 Aligned_cols=21 Identities=19% Similarity=0.335 Sum_probs=18.1
Q ss_pred CceEEEEEeCCCCceeEeCCCC
Q 047535 35 LLDIYGIVDTGSDLMWVQCLPC 56 (376)
Q Consensus 35 q~~~~l~~DTGSs~~wv~~~~C 56 (376)
| .+..++|||..++.+...+.
T Consensus 30 q-~~eaLLDTGAD~TVl~~~~l 50 (124)
T 2rsp_A 30 V-YITALLDSGADITIISEEDW 50 (124)
T ss_dssp E-EEEEEECTTCSSCEEETTTS
T ss_pred E-EEEEEecCCCCcEEEecccC
Confidence 6 77999999999999987643
No 50
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=49.15 E-value=15 Score=30.64 Aligned_cols=27 Identities=26% Similarity=0.331 Sum_probs=23.8
Q ss_pred EEEEEeCCCCCceEEEEEeCCCCceeEeCC
Q 047535 25 VMKFSIGTPPLLDIYGIVDTGSDLMWVQCL 54 (376)
Q Consensus 25 ~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~ 54 (376)
.+.+.||. | .+.+++|||..++.+...
T Consensus 10 ~vtv~I~G--q-~~e~LLDTGAD~TVl~~~ 36 (203)
T 3ka2_A 10 LVTIRIGG--Q-LKEALLDTGADDTVIEEL 36 (203)
T ss_dssp EEEEEETT--E-EEEEEECTTCSSCEECSC
T ss_pred eEEEEECC--E-EEEEEEecCCCceEEecc
Confidence 57789998 7 999999999999999754
No 51
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=46.64 E-value=22 Score=31.78 Aligned_cols=39 Identities=28% Similarity=0.463 Sum_probs=29.0
Q ss_pred ccccccCceEEEE---EEeCCC---CCceEEEEEeCCCCceeEeCC
Q 047535 15 SNVSTANGEYVMK---FSIGTP---PLLDIYGIVDTGSDLMWVQCL 54 (376)
Q Consensus 15 ~~~~~~~~~y~~~---i~iGtp---~q~~~~l~~DTGSs~~wv~~~ 54 (376)
.|+....++|.++ |.||.- .. ...++||||++.+++|..
T Consensus 186 ~p~~~~~~~~~v~l~~i~v~~~~~~~~-~~~aiiDSGTt~~~lp~~ 230 (329)
T 3c9x_A 186 TPVDNSQGFWEFTASGYSVGGGKLNRN-SIDGIADTGTTLLLLDDN 230 (329)
T ss_dssp EECBCTTSSCEEEECCEEETTCCCCSC-CEEEEECTTCCSEEECHH
T ss_pred EEccCCCceEEEEEeeEEECCEeccCC-CceEEEECCCCcEeCCHH
Confidence 4454445677776 678762 35 689999999999999876
No 52
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=39.55 E-value=22 Score=31.74 Aligned_cols=39 Identities=23% Similarity=0.460 Sum_probs=27.8
Q ss_pred ccccccCceEEEE---EEeCC-CCCceEEEEEeCCCCceeEeCC
Q 047535 15 SNVSTANGEYVMK---FSIGT-PPLLDIYGIVDTGSDLMWVQCL 54 (376)
Q Consensus 15 ~~~~~~~~~y~~~---i~iGt-p~q~~~~l~~DTGSs~~wv~~~ 54 (376)
.|+....++|.++ |.||. +.. ...++||||++.+++|..
T Consensus 182 ~p~~~~~~~w~v~l~~i~v~~~~~~-~~~aiiDSGTs~~~lP~~ 224 (323)
T 1bxo_A 182 TGVDNSQGFWSFNVDSYTAGSQSGD-GFSGIADTGTTLLLLDDS 224 (323)
T ss_dssp EECBCTTSSCEEEEEEEEETTEEEE-EEEEEECTTCSSEEECHH
T ss_pred EECCCCCCeEEEEEeeEEECCccCC-CceEEEeCCCCceeCCHH
Confidence 4444345667665 56776 234 678999999999999876
No 53
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=39.40 E-value=26 Score=31.33 Aligned_cols=40 Identities=30% Similarity=0.552 Sum_probs=28.4
Q ss_pred eccccccCceEEEE---EEeCCC---CCceEEEEEeCCCCceeEeCC
Q 047535 14 QSNVSTANGEYVMK---FSIGTP---PLLDIYGIVDTGSDLMWVQCL 54 (376)
Q Consensus 14 ~~~~~~~~~~y~~~---i~iGtp---~q~~~~l~~DTGSs~~wv~~~ 54 (376)
-.|+....++|.++ |.||.- .. ...++||||++.+++|..
T Consensus 184 ~~p~~~~~~~~~v~l~~i~v~~~~~~~~-~~~aiiDSGTt~~~lP~~ 229 (329)
T 1oew_A 184 YTAVSTKQGFWEWTSTGYAVGSGTFKST-SIDGIADTGTTLLYLPAT 229 (329)
T ss_dssp EEECBCTTSSCEEEEEEEEETTSCCEEE-EEEEEECTTCCSEEECHH
T ss_pred EEEccCCCceEEEEEeeEEECCeeccCC-CceEEEeCCCCCEECCHH
Confidence 34444345667665 678873 23 578999999999999876
No 54
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=38.96 E-value=30 Score=30.88 Aligned_cols=39 Identities=23% Similarity=0.430 Sum_probs=28.5
Q ss_pred ccccccCceEEEE---EEeCCC---CCceEEEEEeCCCCceeEeCC
Q 047535 15 SNVSTANGEYVMK---FSIGTP---PLLDIYGIVDTGSDLMWVQCL 54 (376)
Q Consensus 15 ~~~~~~~~~y~~~---i~iGtp---~q~~~~l~~DTGSs~~wv~~~ 54 (376)
.|+....++|.++ |.||.- .. ...++||||++.+++|..
T Consensus 181 ~p~~~~~~~w~v~l~~i~v~~~~~~~~-~~~aiiDSGTt~~~lP~~ 225 (325)
T 1ibq_A 181 TDADSSQGYWGFSTDGYSIGDGSSSSS-GFSAIADTGTTLILLDDE 225 (325)
T ss_dssp EECBCTTSSCEEEECEEEETTSCCBSC-CEEEEECTTCCSEEECHH
T ss_pred EEcCCCCceEEEEECcEEECCeeccCC-CceEEEeCCCCcEeCCHH
Confidence 4444345667665 678763 34 678999999999999876
No 55
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=38.54 E-value=24 Score=31.51 Aligned_cols=39 Identities=31% Similarity=0.543 Sum_probs=27.6
Q ss_pred ccccccCceEEEE---EEeCC--CCCceEEEEEeCCCCceeEeCC
Q 047535 15 SNVSTANGEYVMK---FSIGT--PPLLDIYGIVDTGSDLMWVQCL 54 (376)
Q Consensus 15 ~~~~~~~~~y~~~---i~iGt--p~q~~~~l~~DTGSs~~wv~~~ 54 (376)
.|+....++|.++ |.||. +.. ...++||||++.+++|..
T Consensus 182 ~p~~~~~~~w~v~l~~i~v~~~~~~~-~~~aiiDSGTs~~~lp~~ 225 (323)
T 1izd_A 182 TDVDNSQGFWGFTADGYSIGSDSSSD-SITGIADTGTTLLLLDDS 225 (323)
T ss_dssp EECBCTTSSCEEEESEEEETTEEECC-CEEEEECTTCCSEEECHH
T ss_pred EECCCCCceEEEEECeEEECCcccCC-CceEEEeCCCcceeCCHH
Confidence 3444345667665 46776 234 678999999999999876
No 56
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=37.41 E-value=28 Score=31.07 Aligned_cols=39 Identities=23% Similarity=0.407 Sum_probs=27.9
Q ss_pred ccccccCceEEEE---EEeCCC--CCceEEEEEeCCCCceeEeCC
Q 047535 15 SNVSTANGEYVMK---FSIGTP--PLLDIYGIVDTGSDLMWVQCL 54 (376)
Q Consensus 15 ~~~~~~~~~y~~~---i~iGtp--~q~~~~l~~DTGSs~~wv~~~ 54 (376)
.|+....++|.++ |.||.+ .. ...++||||++.+++|..
T Consensus 186 ~p~~~~~~~~~v~l~~i~vg~~~~~~-~~~~iiDSGTs~~~lP~~ 229 (325)
T 2apr_A 186 VPIDNSRGWWGITVDRATVGTSTVAS-SFDGILDTGTTLLILPNN 229 (325)
T ss_dssp EECBCTTSSCEEEECEEEETTEEEEC-CEEEEECTTCSSEEEEHH
T ss_pred EEccCCCCEEEEEEeEEEECCEecCC-CceEEEecCCccEECCHH
Confidence 4444345667664 678862 34 578999999999999976
No 57
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=36.41 E-value=35 Score=28.91 Aligned_cols=33 Identities=15% Similarity=0.155 Sum_probs=24.6
Q ss_pred CceEEEE---EEeCCC-----CCceEEEEEeCCCCceeEeCC
Q 047535 21 NGEYVMK---FSIGTP-----PLLDIYGIVDTGSDLMWVQCL 54 (376)
Q Consensus 21 ~~~y~~~---i~iGtp-----~q~~~~l~~DTGSs~~wv~~~ 54 (376)
.++|.++ |.||.. .. ...++||||++.+++|..
T Consensus 187 ~~~~~v~l~~i~v~~~~~~~~~~-~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 187 QYYWQFGIGDVLIGDKSTGFCAP-GCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp ETTEEEEECCEEETTEECCTTTT-CEEEEECTTCSSEEECHH
T ss_pred CCeEEEEeeEEEECCEEecccCC-CCEEEEecCcchhhCCHH
Confidence 3567665 678762 34 568999999999999854
No 58
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=28.35 E-value=64 Score=26.74 Aligned_cols=27 Identities=26% Similarity=0.331 Sum_probs=23.4
Q ss_pred EEEEEeCCCCCceEEEEEeCCCCceeEeCC
Q 047535 25 VMKFSIGTPPLLDIYGIVDTGSDLMWVQCL 54 (376)
Q Consensus 25 ~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~ 54 (376)
.+++.||. | .+..++|||..++.+...
T Consensus 114 ~~~iki~G--q-~~e~LlDTGAD~TVl~~~ 140 (203)
T 3ka2_A 114 LVTIRIGG--Q-LKEALLDTGADDTVIEEL 140 (203)
T ss_dssp EEEEEETT--E-EEEEEECTTCSSCEECSC
T ss_pred cEEEEECC--E-EEeeeecccCCceeeecc
Confidence 56788887 7 999999999999999755
No 59
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=27.99 E-value=56 Score=27.48 Aligned_cols=32 Identities=22% Similarity=0.214 Sum_probs=24.2
Q ss_pred ceEEE---EEEeCCCC----CceEEEEEeCCCCceeEeCC
Q 047535 22 GEYVM---KFSIGTPP----LLDIYGIVDTGSDLMWVQCL 54 (376)
Q Consensus 22 ~~y~~---~i~iGtp~----q~~~~l~~DTGSs~~wv~~~ 54 (376)
++|.+ .|.||.-. . ...+++|||++.+++|..
T Consensus 99 ~~~~v~l~~i~v~~~~~~~~~-~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 99 AYWQVHLDQVEVASGLTLCKE-GCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp TTBEEEEEEEEETTSCEESTT-CEEEEECTTCSSEEECHH
T ss_pred cEEEEEEeEEEECCeeEeccC-CCEEEEECCCccccCCHH
Confidence 45655 46787632 4 578999999999999876
No 60
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=27.37 E-value=60 Score=23.69 Aligned_cols=28 Identities=21% Similarity=0.462 Sum_probs=22.3
Q ss_pred eeEEecCCCCceeeEeccCCCCccCCCceEEecCCCCccccHHHH
Q 047535 223 EGISVGNLSNSSKLIPYYNSSGAISKGNMFIDTGAPPTLLPKDFY 267 (376)
Q Consensus 223 ~~i~v~~~~~~~~~~~~~~~~~~~~~~~~iiDTGt~~i~lp~~~~ 267 (376)
..+++++ +.++ +++|||+--+.+.....
T Consensus 11 v~v~I~G-----q~~e------------~LLDTGAD~TVl~~~~w 38 (104)
T 1fmb_A 11 TIVLIND-----TPLN------------VLLDTGADTSVLTTAHY 38 (104)
T ss_dssp EEEEETT-----EEEE------------EEECTTCSSCEEEHHHH
T ss_pred EEEEECC-----EEEE------------EEeccCCCcEEEccccC
Confidence 4578899 7554 99999999999986553
No 61
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=26.06 E-value=35 Score=30.46 Aligned_cols=33 Identities=18% Similarity=0.350 Sum_probs=24.7
Q ss_pred CceEEEE---EEeCCC---CCceEEEEEeCCCCceeEeCC
Q 047535 21 NGEYVMK---FSIGTP---PLLDIYGIVDTGSDLMWVQCL 54 (376)
Q Consensus 21 ~~~y~~~---i~iGtp---~q~~~~l~~DTGSs~~wv~~~ 54 (376)
.++|.++ |.||.. .. ...++||||++.+++|..
T Consensus 192 ~~~w~v~l~~i~v~~~~~~~~-~~~aiiDSGTs~~~lP~~ 230 (330)
T 1yg9_A 192 DDSWKFRLDGVKIGDTTVAPA-GTQAIIDTSKAIIVGPKA 230 (330)
T ss_dssp TTSCCEECSEEEETTEEEECT-TCEEEECTTCSSEEEEHH
T ss_pred CCEEEEEeCeEEECCEEEcCC-CcEEEEecCCccccCCHH
Confidence 4566554 778762 23 468999999999999976
No 62
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=24.55 E-value=82 Score=28.94 Aligned_cols=42 Identities=2% Similarity=-0.017 Sum_probs=27.5
Q ss_pred eeeeecCCCCceEEEEEeeEEecCCCCceeeEeccCCCCccCCCceEEecCCCCccccHH
Q 047535 206 STSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYNSSGAISKGNMFIDTGAPPTLLPKD 265 (376)
Q Consensus 206 ~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~iiDTGt~~i~lp~~ 265 (376)
..|+..+.....|.++ |.||... +. ..++||||++.+.+|-.
T Consensus 11 ~~pl~~~~~~~~Y~~~---i~iGTP~---Q~------------~~v~~DTGSs~lWv~~~ 52 (403)
T 3aup_A 11 VLPVQNDGSTGLHWAN---LQKRTPL---MQ------------VPVLVDLNGNHLWVNCE 52 (403)
T ss_dssp EEEEEECTTTCCEEEE---EEETTTT---EE------------EEEEEETTCSSEEEECS
T ss_pred EEeeecCCCCceEEEE---EECCCCC---ce------------eEEEEECCCCceeECCC
Confidence 4677643334567754 5888610 22 35999999999998853
No 63
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=23.54 E-value=64 Score=24.72 Aligned_cols=24 Identities=29% Similarity=0.627 Sum_probs=19.9
Q ss_pred eEEecCCCCceeeEeccCCCCccCCCceEEecCCCCccccH
Q 047535 224 GISVGNLSNSSKLIPYYNSSGAISKGNMFIDTGAPPTLLPK 264 (376)
Q Consensus 224 ~i~v~~~~~~~~~~~~~~~~~~~~~~~~iiDTGt~~i~lp~ 264 (376)
.+++++ +.+. +++|||...+.|+.
T Consensus 26 ~i~I~G-----~~~~------------~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 26 TLKVGG-----QPVT------------FLVDTGAQHSVLTQ 49 (132)
T ss_dssp EEEETT-----EEEE------------EEECTTCSSCEECS
T ss_pred EEEECC-----EEEE------------EEEeCCCCeEEEcc
Confidence 378888 7555 89999999999885
No 64
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=22.54 E-value=79 Score=29.28 Aligned_cols=43 Identities=16% Similarity=0.239 Sum_probs=30.5
Q ss_pred ceeeeeecCCCCceEEEEEeeEEecCCCCceeeEeccCCCCccCCCceEEecCCCCccccH
Q 047535 204 VVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYNSSGAISKGNMFIDTGAPPTLLPK 264 (376)
Q Consensus 204 ~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~iiDTGt~~i~lp~ 264 (376)
....|+..+.....|.++ |.+|. -.. ...++||||+.++.+|-
T Consensus 8 ~~~~pv~~d~~~~~Y~~~---i~iGT-----Ppq----------~~~v~~DTGS~~lWv~c 50 (413)
T 3vla_A 8 ALVVPVKKDASTLQYVTT---INQRT-----PLV----------SENLVVDLGGRFLWVDC 50 (413)
T ss_dssp EEEEEEEECTTTCCEEEE---EEETT-----TTE----------EEEEEEETTCSSEEEEC
T ss_pred cEEEEeeecCCCCeEEEE---EEcCC-----CCc----------ceEEEEeCCChhhhccc
Confidence 456788876655567755 58887 222 23699999999999985
No 65
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=21.97 E-value=78 Score=30.03 Aligned_cols=33 Identities=18% Similarity=0.234 Sum_probs=24.7
Q ss_pred CceEEEE---EEeCC-----CCCceEEEEEeCCCCceeEeCC
Q 047535 21 NGEYVMK---FSIGT-----PPLLDIYGIVDTGSDLMWVQCL 54 (376)
Q Consensus 21 ~~~y~~~---i~iGt-----p~q~~~~l~~DTGSs~~wv~~~ 54 (376)
.++|.++ |.||. +.. ...+++|||++.+++|..
T Consensus 230 ~~~w~v~l~~i~v~g~~~~~~~~-~~~aiiDTGTs~~~lP~~ 270 (478)
T 1qdm_A 230 KGYWQFDMGDVLVGGKSTGFCAG-GCAAIADSGTSLLAGPTA 270 (478)
T ss_dssp ETTEEEEECCEEETTEECSTTTT-CEEEEECSSCCSEEECHH
T ss_pred CCeEEEEEeEEEECCEEEeecCC-CceEEEcCCCCceeCCHH
Confidence 3567665 67775 234 578999999999999865
No 66
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=21.21 E-value=1.3e+02 Score=26.87 Aligned_cols=43 Identities=23% Similarity=0.408 Sum_probs=28.7
Q ss_pred ceeeeeecCCCCceEEEEEeeEEecCCCCceeeEeccCCCCccCCCceEEecCCCCccccHH
Q 047535 204 VVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYNSSGAISKGNMFIDTGAPPTLLPKD 265 (376)
Q Consensus 204 ~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~iiDTGt~~i~lp~~ 265 (376)
+...|+.... ...|.+. |.||... +.+ .++||||++.+.+|..
T Consensus 7 ~~~~~l~~~~-~~~Y~~~---i~iGtP~---q~~------------~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 7 VDTPGLYDFD-LEEYAIP---VSIGTPG---QDF------------YLLFDTGSSDTWVPHK 49 (361)
T ss_dssp EEEEEEEETT-TTEEEEE---EEETTTT---EEE------------EEEEETTCCCCEEEBT
T ss_pred cceEEeecCC-CCEEEEE---EEECCCC---cEE------------EEEEcCCCCCeEECCC
Confidence 5566776532 4467754 6888510 333 4999999999999864
Done!