Your job contains 1 sequence.
>047539
MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYIGHYPMLAYFAIAEN
ESIGREHYNFMQKMLLPCGLPPEREDD
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 047539
(87 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:1005716320 - symbol:AT4G14342 "AT4G14342" spec... 446 4.0e-42 1
TAIR|locus:505006364 - symbol:AT3G23325 "AT3G23325" speci... 446 4.0e-42 1
FB|FBgn0040534 - symbol:CG11985 species:7227 "Drosophila ... 300 1.2e-26 1
UNIPROTKB|E1C5A2 - symbol:SF3B5 "Uncharacterized protein"... 293 6.6e-26 1
UNIPROTKB|Q56K13 - symbol:SF3B5 "Splicing factor 3B subun... 289 1.8e-25 1
UNIPROTKB|Q9BWJ5 - symbol:SF3B5 "Splicing factor 3B subun... 289 1.8e-25 1
MGI|MGI:1913375 - symbol:Sf3b5 "splicing factor 3b, subun... 279 2.0e-24 1
RGD|1586993 - symbol:Sf3b5 "splicing factor 3b, subunit 5... 279 2.0e-24 1
DICTYBASE|DDB_G0271312 - symbol:sf3b5 "splicing factor 3B... 262 1.3e-22 1
POMBASE|SPBC211.05 - symbol:sab10 "splicing factor 3B (pr... 196 1.3e-15 1
>TAIR|locus:1005716320 [details] [associations]
symbol:AT4G14342 "AT4G14342" species:3702 "Arabidopsis
thaliana" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISM] EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161538 EMBL:Z97336
eggNOG:NOG235952 KO:K12832 OMA:HADTTKY InterPro:IPR009846
InterPro:IPR017089 PANTHER:PTHR20978 Pfam:PF07189 PIRSF:PIRSF037010
HOGENOM:HOG000210519 ProtClustDB:CLSN2688692 EMBL:AY064021
EMBL:AY123001 IPI:IPI00538473 RefSeq:NP_849379.1 UniGene:At.27417
STRING:P58728 PRIDE:P58728 DNASU:827077 EnsemblPlants:AT4G14342.1
GeneID:827077 KEGG:ath:AT4G14342 TAIR:At4g14342 InParanoid:P58728
PhylomeDB:P58728 Genevestigator:P58728 Uniprot:P58728
Length = 87
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 82/87 (94%), Positives = 86/87 (98%)
Query: 1 MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYIGHYPMLAYFAIAEN 60
MQASDRFNINSQLEHLQAKYVGTGHADL+RFEWAVNIQRDSYASYIGHYPML+YFAIAEN
Sbjct: 1 MQASDRFNINSQLEHLQAKYVGTGHADLSRFEWAVNIQRDSYASYIGHYPMLSYFAIAEN 60
Query: 61 ESIGREHYNFMQKMLLPCGLPPEREDD 87
ESIGRE YNFMQKMLLPCGLPPERE++
Sbjct: 61 ESIGRERYNFMQKMLLPCGLPPEREEE 87
>TAIR|locus:505006364 [details] [associations]
symbol:AT3G23325 "AT3G23325" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0006397 "mRNA processing" evidence=ISS]
EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB015474
eggNOG:NOG235952 KO:K12832 InterPro:IPR009846 InterPro:IPR017089
PANTHER:PTHR20978 Pfam:PF07189 PIRSF:PIRSF037010
HOGENOM:HOG000210519 EMBL:AY063990 EMBL:AY096688 IPI:IPI00518432
RefSeq:NP_566727.1 UniGene:At.27115 IntAct:Q9LW64 STRING:Q9LW64
PaxDb:Q9LW64 DNASU:821913 EnsemblPlants:AT3G23325.1 GeneID:821913
KEGG:ath:AT3G23325 TAIR:At3g23325 InParanoid:Q9LW64 OMA:LEWATSI
PhylomeDB:Q9LW64 ProtClustDB:CLSN2688692 Genevestigator:Q9LW64
GermOnline:AT3G23325 Uniprot:Q9LW64
Length = 87
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 82/87 (94%), Positives = 85/87 (97%)
Query: 1 MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYIGHYPMLAYFAIAEN 60
MQASDRFNINSQLEHLQAKYVGTGHADL+RFEW VNIQRDSYASYIGHYPML+YFAIAEN
Sbjct: 1 MQASDRFNINSQLEHLQAKYVGTGHADLSRFEWTVNIQRDSYASYIGHYPMLSYFAIAEN 60
Query: 61 ESIGREHYNFMQKMLLPCGLPPEREDD 87
ESIGRE YNFMQKMLLPCGLPPERED+
Sbjct: 61 ESIGRERYNFMQKMLLPCGLPPEREDE 87
>FB|FBgn0040534 [details] [associations]
symbol:CG11985 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0007052 "mitotic spindle
organization" evidence=IMP] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0005686 "U2 snRNP" evidence=IDA] EMBL:AE014297
GO:GO:0007052 GO:GO:0071011 GO:GO:0000398 eggNOG:NOG235952
GeneTree:ENSGT00390000013215 KO:K12832 OMA:HADTTKY
InterPro:IPR009846 InterPro:IPR017089 PANTHER:PTHR20978
Pfam:PF07189 PIRSF:PIRSF037010 RefSeq:NP_652189.1 UniGene:Dm.30423
DIP:DIP-20303N IntAct:Q9VHI4 MINT:MINT-841090 STRING:Q9VHI4
PaxDb:Q9VHI4 PRIDE:Q9VHI4 EnsemblMetazoa:FBtr0082006 GeneID:50007
KEGG:dme:Dmel_CG11985 UCSC:CG11985-RA FlyBase:FBgn0040534
InParanoid:Q9VHI4 OrthoDB:EOG4PK0RH PhylomeDB:Q9VHI4
GenomeRNAi:50007 NextBio:840030 Bgee:Q9VHI4 GermOnline:CG11985
Uniprot:Q9VHI4
Length = 85
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 53/83 (63%), Positives = 66/83 (79%)
Query: 5 DRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYIGHYPMLAYFAIAENESIG 64
+R+NI+SQLEHLQ+KY+GTGHAD +FEW N RDS ASY+GHY +L YFAIAENES
Sbjct: 3 ERYNIHSQLEHLQSKYIGTGHADTTKFEWLTNQHRDSLASYMGHYDILNYFAIAENESKA 62
Query: 65 REHYNFMQKMLLPCGLPPEREDD 87
R +N M++ML PCG PPE+ +D
Sbjct: 63 RVRFNLMERMLQPCGPPPEKLED 85
>UNIPROTKB|E1C5A2 [details] [associations]
symbol:SF3B5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
GO:GO:0005689 CTD:83443 GeneTree:ENSGT00390000013215 KO:K12832
OMA:HADTTKY InterPro:IPR009846 InterPro:IPR017089 PANTHER:PTHR20978
Pfam:PF07189 PIRSF:PIRSF037010 EMBL:AADN02035504 IPI:IPI00680574
RefSeq:XP_001232553.1 Ensembl:ENSGALT00000031818 GeneID:769794
KEGG:gga:769794 NextBio:20920021 Uniprot:E1C5A2
Length = 86
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 51/84 (60%), Positives = 66/84 (78%)
Query: 4 SDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYIGHYPMLAYFAIAENESI 63
+DR+ I+SQLEHLQ+KY+GTGHAD ++EW VN RDSY SY+GH+ +L YFAIAENES
Sbjct: 2 TDRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFAIAENESK 61
Query: 64 GREHYNFMQKMLLPCGLPPEREDD 87
R +N M+KML PCG P ++ D+
Sbjct: 62 ARVRFNLMEKMLQPCGPPADKPDE 85
>UNIPROTKB|Q56K13 [details] [associations]
symbol:SF3B5 "Splicing factor 3B subunit 5" species:9913
"Bos taurus" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] GO:GO:0008380 GO:GO:0006397
GO:GO:0005689 EMBL:AY911314 EMBL:BC111655 IPI:IPI00709078
RefSeq:NP_001020521.1 UniGene:Bt.4949 ProteinModelPortal:Q56K13
STRING:Q56K13 PRIDE:Q56K13 Ensembl:ENSBTAT00000012920 GeneID:574400
KEGG:bta:574400 CTD:83443 eggNOG:NOG235952
GeneTree:ENSGT00390000013215 HOVERGEN:HBG054589 InParanoid:Q56K13
KO:K12832 OMA:HADTTKY OrthoDB:EOG479F8N NextBio:20891928
InterPro:IPR009846 InterPro:IPR017089 PANTHER:PTHR20978
Pfam:PF07189 PIRSF:PIRSF037010 Uniprot:Q56K13
Length = 86
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 50/84 (59%), Positives = 66/84 (78%)
Query: 4 SDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYIGHYPMLAYFAIAENESI 63
+DR+ I+SQLEHLQ+KY+GTGHAD ++EW VN RDSY SY+GH+ +L YFAIAENES
Sbjct: 2 TDRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFAIAENESK 61
Query: 64 GREHYNFMQKMLLPCGLPPEREDD 87
R +N M+KML PCG P ++ ++
Sbjct: 62 ARVRFNLMEKMLQPCGPPADKPEE 85
>UNIPROTKB|Q9BWJ5 [details] [associations]
symbol:SF3B5 "Splicing factor 3B subunit 5" species:9606
"Homo sapiens" [GO:0005689 "U12-type spliceosomal complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] Reactome:REACT_71 GO:GO:0005654
EMBL:CH471051 Reactome:REACT_1675 GO:GO:0000398 GO:GO:0005689
CTD:83443 eggNOG:NOG235952 HOVERGEN:HBG054589 KO:K12832 OMA:HADTTKY
OrthoDB:EOG479F8N InterPro:IPR009846 InterPro:IPR017089
PANTHER:PTHR20978 Pfam:PF07189 PIRSF:PIRSF037010 EMBL:AK312079
EMBL:AL031390 EMBL:BC000198 EMBL:BK000562 IPI:IPI00010404
RefSeq:NP_112577.1 UniGene:Hs.110695 ProteinModelPortal:Q9BWJ5
IntAct:Q9BWJ5 MINT:MINT-3062697 STRING:Q9BWJ5 PhosphoSite:Q9BWJ5
DMDM:20140757 PaxDb:Q9BWJ5 PeptideAtlas:Q9BWJ5 PRIDE:Q9BWJ5
DNASU:83443 Ensembl:ENST00000367569 GeneID:83443 KEGG:hsa:83443
UCSC:uc003qkr.1 GeneCards:GC06M144416 HGNC:HGNC:21083 HPA:HPA054408
neXtProt:NX_Q9BWJ5 PharmGKB:PA134951632 InParanoid:Q9BWJ5
PhylomeDB:Q9BWJ5 GenomeRNAi:83443 NextBio:72326 Bgee:Q9BWJ5
CleanEx:HS_SF3B5 Genevestigator:Q9BWJ5 GermOnline:ENSG00000169976
Uniprot:Q9BWJ5
Length = 86
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 50/84 (59%), Positives = 66/84 (78%)
Query: 4 SDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYIGHYPMLAYFAIAENESI 63
+DR+ I+SQLEHLQ+KY+GTGHAD ++EW VN RDSY SY+GH+ +L YFAIAENES
Sbjct: 2 TDRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFAIAENESK 61
Query: 64 GREHYNFMQKMLLPCGLPPEREDD 87
R +N M+KML PCG P ++ ++
Sbjct: 62 ARVRFNLMEKMLQPCGPPADKPEE 85
>MGI|MGI:1913375 [details] [associations]
symbol:Sf3b5 "splicing factor 3b, subunit 5" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] MGI:MGI:1913375
GO:GO:0008380 GO:GO:0006397 GO:GO:0005689 CTD:83443
eggNOG:NOG235952 GeneTree:ENSGT00390000013215 HOVERGEN:HBG054589
KO:K12832 OMA:HADTTKY OrthoDB:EOG479F8N InterPro:IPR009846
InterPro:IPR017089 PANTHER:PTHR20978 Pfam:PF07189 PIRSF:PIRSF037010
EMBL:AK003475 EMBL:AK009874 EMBL:BC006603 IPI:IPI00311948
RefSeq:NP_780311.2 UniGene:Mm.29743 UniGene:Mm.402225 IntAct:Q923D4
STRING:Q923D4 PaxDb:Q923D4 PRIDE:Q923D4 Ensembl:ENSMUST00000105139
GeneID:66125 KEGG:mmu:66125 UCSC:uc007eki.2 HOGENOM:HOG000210519
InParanoid:Q923D4 NextBio:320706 Bgee:Q923D4 CleanEx:MM_SF3B5
Genevestigator:Q923D4 GermOnline:ENSMUSG00000061029 Uniprot:Q923D4
Length = 86
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 49/84 (58%), Positives = 65/84 (77%)
Query: 4 SDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYIGHYPMLAYFAIAENESI 63
+DR+ I+SQLEHLQ+KY+GTGHAD ++EW VN RDSY SY+GH+ +L YFAIAENES
Sbjct: 2 TDRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFAIAENESK 61
Query: 64 GREHYNFMQKMLLPCGLPPEREDD 87
R +N M+KML P G P ++ ++
Sbjct: 62 ARVRFNLMEKMLQPSGPPADKPEE 85
>RGD|1586993 [details] [associations]
symbol:Sf3b5 "splicing factor 3b, subunit 5" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005689
"U12-type spliceosomal complex" evidence=IEA;ISO] RGD:1586993
GO:GO:0005689 CTD:83443 GeneTree:ENSGT00390000013215 KO:K12832
OMA:HADTTKY OrthoDB:EOG479F8N InterPro:IPR009846 InterPro:IPR017089
PANTHER:PTHR20978 Pfam:PF07189 PIRSF:PIRSF037010 EMBL:CH473994
IPI:IPI00205430 RefSeq:NP_001119564.1 UniGene:Rn.2083
Ensembl:ENSRNOT00000019994 GeneID:680891 KEGG:rno:680891
UCSC:RGD:1586993 NextBio:719724 Uniprot:D4A5T1
Length = 86
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 49/84 (58%), Positives = 65/84 (77%)
Query: 4 SDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYIGHYPMLAYFAIAENESI 63
+DR+ I+SQLEHLQ+KY+GTGHAD ++EW VN RDSY SY+GH+ +L YFAIAENES
Sbjct: 2 TDRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFAIAENESK 61
Query: 64 GREHYNFMQKMLLPCGLPPEREDD 87
R +N M+KML P G P ++ ++
Sbjct: 62 ARVRFNLMEKMLQPSGPPADKPEE 85
>DICTYBASE|DDB_G0271312 [details] [associations]
symbol:sf3b5 "splicing factor 3B subunit 10 family
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005686 "U2 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0271312 GO:GO:0008380 GO:GO:0006397
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0005686 eggNOG:NOG235952 KO:K12832 OMA:HADTTKY
InterPro:IPR009846 InterPro:IPR017089 PANTHER:PTHR20978
Pfam:PF07189 PIRSF:PIRSF037010 RefSeq:XP_645657.1 STRING:Q55BF5
PRIDE:Q55BF5 EnsemblProtists:DDB0233174 GeneID:8617849
KEGG:ddi:DDB_G0271312 ProtClustDB:CLSZ2729264 Uniprot:Q55BF5
Length = 94
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 47/84 (55%), Positives = 64/84 (76%)
Query: 4 SDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYIGHYPMLAYFAIAENESI 63
S+R ++NSQLEHLQ +YVGTGHAD+++ EW N RDS +S+IGH L+ F+IAENES+
Sbjct: 2 SERESLNSQLEHLQMRYVGTGHADISKHEWLTNQHRDSLSSFIGHSSFLSLFSIAENESV 61
Query: 64 GREHYNFMQKMLLPCGLPPEREDD 87
GR YN + KM+ PCG P+ +D+
Sbjct: 62 GRVRYNTLTKMISPCGPAPKIKDN 85
>POMBASE|SPBC211.05 [details] [associations]
symbol:sab10 "splicing factor 3B (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] PomBase:SPBC211.05 GO:GO:0005829
EMBL:CU329671 GO:GO:0005681 GO:GO:0045292 eggNOG:NOG235952
KO:K12832 OMA:HADTTKY InterPro:IPR009846 InterPro:IPR017089
PANTHER:PTHR20978 Pfam:PF07189 PIRSF:PIRSF037010
HOGENOM:HOG000210519 PIR:T50340 RefSeq:NP_596615.1 IntAct:Q9P7R6
STRING:Q9P7R6 EnsemblFungi:SPBC211.05.1 GeneID:2540636
KEGG:spo:SPBC211.05 OrthoDB:EOG44QX9R NextBio:20801761
Uniprot:Q9P7R6
Length = 85
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 36/79 (45%), Positives = 52/79 (65%)
Query: 4 SDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYIGHYPMLAYFAIAENESI 63
+DR ++LE LQA+YVG G+A ++EW VN RD+ +S +GH P+LAY A A E
Sbjct: 2 ADRLRSQAKLEQLQARYVGVGNAFTTKYEWMVNQHRDTLSSVVGHPPLLAYMATALGEPR 61
Query: 64 GREHYNFMQKMLLPCGLPP 82
+ N ++KM++PCG PP
Sbjct: 62 VQVRKNLLEKMIMPCGPPP 80
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.417 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 87 87 0.00091 102 3 11 22 0.45 29
29 0.48 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 547 (58 KB)
Total size of DFA: 115 KB (2076 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 8.97u 0.11s 9.08t Elapsed: 00:00:01
Total cpu time: 8.97u 0.11s 9.08t Elapsed: 00:00:01
Start: Sat May 11 12:13:34 2013 End: Sat May 11 12:13:35 2013